Pregenerated sensors for HLA-DRA (Homo sapiens)
Ensembl gene IDs: ENSG00000204287, ENSG00000206308Ensembl transcript IDs: ENST00000374982.5, ENST00000383127.6, ENST00000383258.3, ENST00000383259.6, ENST00000395388.7, ENST00000411505.2, ENST00000411524.6, ENST00000414698.6, ENST00000415767.2, ENST00000416883.6, ENST00000418111.2, ENST00000427753.2, ENST00000434866.2, ENST00000442960.6, ENST00000459705.1, ENST00000461633.1, ENST00000481943.1, ENST00000482781.1, ENST00000493431.1, ENST00000498597.1, ENST00000613328.1
Found 12 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | ATTTCCAGGTTGGCTTTGTCCACAGCTATGTTGGCCAATGCACCTTaGGCCTCAAAGCTGGCAAATCGTCCAAATTCTTCAAGCCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: ISRLALSTAMLANAP*ASKLANRPNSSSRQ Trigger: CTGGCGGCTTGAAGAATTTGGACGATTTGCCAGCTTTGAGGCTCAAGGTGCATTGGCCAACATAGCTGTGGACAAAGCCAACCTGGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000374982.5 ENST00000383127.6 ENST00000383258.3 ENST00000383259.6 ENST00000395388.7 ENST00000411505.2 ENST00000411524.6 ENST00000414698.6 ENST00000415767.2 ENST00000416883.6 ENST00000418111.2 ENST00000427753.2 ENST00000434866.2 ENST00000442960.6 ENST00000613328.1 |
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| CDS TCA 90 bp | ATTTCCAGGTTGGCTTTGTCCACAGCTATGTTGGCCAATGCACCTTaGGCCTCAAAGCTGGCAAATCGTCCAAATTCTTCTTTGATAGCC | + |
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Preference number: 5 (lower is better) Translates to: ISRLALSTAMLANAP*ASKLANRPNSSLIA Trigger: GGCTATCAAAGAAGAATTTGGACGATTTGCCAGCTTTGAGGCTCAAGGTGCATTGGCCAACATAGCTGTGGACAAAGCCAACCTGGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000459705.1 ENST00000461633.1 ENST00000481943.1 ENST00000482781.1 ENST00000493431.1 ENST00000498597.1 |
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| CDS GCA 90 bp | TGTCATGATTTCCAGGTTGGCTTTGTCCACAGCTATGTTGGCCAATaGACCTTGAGCCTCAAAGCTGGCAAATCGTCCAAATTCTTCAAG | + |
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Preference number: 5 (lower is better) Translates to: CHDFQVGFVHSYVGQ*TLSLKAGKSSKFFK Trigger: CTTGAAGAATTTGGACGATTTGCCAGCTTTGAGGCTCAAGGTGCATTGGCCAACATAGCTGTGGACAAAGCCAACCTGGAAATCATGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000374982.5 ENST00000383127.6 ENST00000383258.3 ENST00000383259.6 ENST00000395388.7 ENST00000411505.2 ENST00000411524.6 ENST00000414698.6 ENST00000415767.2 ENST00000416883.6 ENST00000418111.2 ENST00000427753.2 ENST00000434866.2 ENST00000442960.6 ENST00000613328.1 |
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| CDS GCA 90 bp | TGTCATGATTTCCAGGTTGGCTTTGTCCACAGCTATGTTGGCCAATaGACCTTGAGCCTCAAAGCTGGCAAATCGTCCAAATTCTTCTTT | + |
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Preference number: 5 (lower is better) Translates to: CHDFQVGFVHSYVGQ*TLSLKAGKSSKFFF Trigger: AAAGAAGAATTTGGACGATTTGCCAGCTTTGAGGCTCAAGGTGCATTGGCCAACATAGCTGTGGACAAAGCCAACCTGGAAATCATGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000459705.1 ENST00000461633.1 ENST00000481943.1 ENST00000482781.1 ENST00000493431.1 ENST00000498597.1 |
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| CDS CCA 72 bp | CAGCTATGTTGGCCAATGCACCTTGAGCCTCAAAGCTaGCAAATCGTCCAAATTCTTCAAGCCGCCAGACCG | + |
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Preference number: 6 (lower is better) Translates to: QLCWPMHLEPQS*QIVQILQAARP Trigger: CGGTCTGGCGGCTTGAAGAATTTGGACGATTTGCCAGCTTTGAGGCTCAAGGTGCATTGGCCAACATAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000374982.5 ENST00000383127.6 ENST00000383258.3 ENST00000383259.6 ENST00000395388.7 ENST00000411505.2 ENST00000411524.6 ENST00000414698.6 ENST00000415767.2 ENST00000416883.6 ENST00000418111.2 ENST00000427753.2 ENST00000434866.2 ENST00000442960.6 ENST00000613328.1 |
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| CDS CAA 90 bp | GATTTCCAGGTTGGCTTTGTCCACAGCTATGTTGGCCAATGCACCTaGAGCCTCAAAGCTGGCAAATCGTCCAAATTCTTCAAGCCGCCA | + |
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Preference number: 6 (lower is better) Translates to: DFQVGFVHSYVGQCT*SLKAGKSSKFFKPP Trigger: TGGCGGCTTGAAGAATTTGGACGATTTGCCAGCTTTGAGGCTCAAGGTGCATTGGCCAACATAGCTGTGGACAAAGCCAACCTGGAAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000374982.5 ENST00000383127.6 ENST00000383258.3 ENST00000383259.6 ENST00000395388.7 ENST00000411505.2 ENST00000411524.6 ENST00000414698.6 ENST00000415767.2 ENST00000416883.6 ENST00000418111.2 ENST00000427753.2 ENST00000434866.2 ENST00000442960.6 ENST00000613328.1 |
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| CDS GCA 72 bp | TTCCAGGTTGGCTTTGTCCACAGCTATGTTGGCCAATaGACCTTGAGCCTCAAAGCTGGCAAATCGTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: FQVGFVHSYVGQ*TLSLKAGKSSK Trigger: TTTGGACGATTTGCCAGCTTTGAGGCTCAAGGTGCATTGGCCAACATAGCTGTGGACAAAGCCAACCTGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000374982.5 ENST00000383127.6 ENST00000383258.3 ENST00000383259.6 ENST00000395388.7 ENST00000411505.2 ENST00000411524.6 ENST00000414698.6 ENST00000415767.2 ENST00000416883.6 ENST00000418111.2 ENST00000427753.2 ENST00000434866.2 ENST00000442960.6 ENST00000459705.1 ENST00000461633.1 ENST00000481943.1 ENST00000482781.1 ENST00000493431.1 ENST00000498597.1 ENST00000613328.1 |
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| CDS CAA 72 bp | GTTGGCTTTGTCCACAGCTATGTTGGCCAATGCACCTaGAGCCTCAAAGCTGGCAAATCGTCCAAATTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VGFVHSYVGQCT*SLKAGKSSKFF Trigger: GAAGAATTTGGACGATTTGCCAGCTTTGAGGCTCAAGGTGCATTGGCCAACATAGCTGTGGACAAAGCCAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 21 transcripts: ENST00000374982.5 ENST00000383127.6 ENST00000383258.3 ENST00000383259.6 ENST00000395388.7 ENST00000411505.2 ENST00000411524.6 ENST00000414698.6 ENST00000415767.2 ENST00000416883.6 ENST00000418111.2 ENST00000427753.2 ENST00000434866.2 ENST00000442960.6 ENST00000459705.1 ENST00000461633.1 ENST00000481943.1 ENST00000482781.1 ENST00000493431.1 ENST00000498597.1 ENST00000613328.1 |
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| CDS CAA 90 bp | GATTTCCAGGTTGGCTTTGTCCACAGCTATGTTGGCCAATGCACCTaGAGCCTCAAAGCTGGCAAATCGTCCAAATTCTTCTTTGATAGC | + |
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Preference number: 6 (lower is better) Translates to: DFQVGFVHSYVGQCT*SLKAGKSSKFFFDS Trigger: GCTATCAAAGAAGAATTTGGACGATTTGCCAGCTTTGAGGCTCAAGGTGCATTGGCCAACATAGCTGTGGACAAAGCCAACCTGGAAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000459705.1 ENST00000461633.1 ENST00000481943.1 ENST00000482781.1 ENST00000493431.1 ENST00000498597.1 |
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| CDS TCA 72 bp | TTGGCTTTGTCCACAGCTATGTTGGCCAATGCACCTTaGGCCTCAAAGCTGGCAAATCGTCCAAATTCTTCA | + |
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Preference number: 6 (lower is better) Translates to: LALSTAMLANAP*ASKLANRPNSS Trigger: TGAAGAATTTGGACGATTTGCCAGCTTTGAGGCTCAAGGTGCATTGGCCAACATAGCTGTGGACAAAGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 15 transcripts: ENST00000374982.5 ENST00000383127.6 ENST00000383258.3 ENST00000383259.6 ENST00000395388.7 ENST00000411505.2 ENST00000411524.6 ENST00000414698.6 ENST00000415767.2 ENST00000416883.6 ENST00000418111.2 ENST00000427753.2 ENST00000434866.2 ENST00000442960.6 ENST00000613328.1 |
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| CDS TCA 72 bp | TTGGCTTTGTCCACAGCTATGTTGGCCAATGCACCTTaGGCCTCAAAGCTGGCAAATCGTCCAAATTCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LALSTAMLANAP*ASKLANRPNSS Trigger: AGAAGAATTTGGACGATTTGCCAGCTTTGAGGCTCAAGGTGCATTGGCCAACATAGCTGTGGACAAAGCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000459705.1 ENST00000461633.1 ENST00000481943.1 ENST00000482781.1 ENST00000493431.1 ENST00000498597.1 |
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| CDS TCA 72 bp | GCTGGCAAATCGTCCAAATTCTTCTTTGATAGCCCATaGTTCCTGAGCGCTCATCAGCACAGCTATGATGAA | + |
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Preference number: 6 (lower is better) Translates to: AGKSSKFFFDSP*FLSAHQHSYDE Trigger: TTCATCATAGCTGTGCTGATGAGCGCTCAGGAATCATGGGCTATCAAAGAAGAATTTGGACGATTTGCCAGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000459705.1 ENST00000461633.1 ENST00000481943.1 ENST00000482781.1 ENST00000493431.1 ENST00000498597.1 |
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