RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HLA-DOA (Homo sapiens)

Ensembl gene IDs: ENSG00000204252, ENSG00000206292, ENSG00000232957, ENSG00000232962, ENSG00000235744

Ensembl transcript IDs: ENST00000229829.7, ENST00000374813.1, ENST00000383225.2, ENST00000383226.4, ENST00000416763.1, ENST00000418857.1, ENST00000426070.2, ENST00000426685.2, ENST00000434335.2, ENST00000438987.2, ENST00000444109.1, ENST00000452598.2, ENST00000455325.1, ENST00000457663.1, ENST00000465107.1, ENST00000466497.1, ENST00000468742.1, ENST00000474779.1, ENST00000477987.1, ENST00000489297.1, ENST00000495532.1

Found 748 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCACTGGGTTCCAGTTACCAGACCACAGCCAAGGTCCAGGATGGCTaGATCAGAGTCATCCAGAGCCGGTTAAAAATGACAGCCTCGGCT +
Preference number: 1 (lower is better)
Translates to: SLGSSYQTTAKVQDG*IRVIQSRLKMTASA
Trigger: AGCCGAGGCTGTCATTTTTAACCGGCTCTGGATGACTCTGATGCAGCCATCCTGGACCTTGGCTGTGGTCTGGTAACTGGAACCCAGTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR TCA 90 bp ATGCACTTAAAGGGCACTGAGCACGCAGGGGCTGTCACAAACCCATaGGGATCTGCAGGGTGTCTCCCACAAGTCATTTCTCTCAGAAGG +
Preference number: 1 (lower is better)
Translates to: MHLKGTEHAGAVTNP*GSAGCLPQVISLRR
Trigger: CCTTCTGAGAGAAATGACTTGTGGGAGACACCCTGCAGATCCTCATGGGTTTGTGACAGCCCCTGCGTGCTCAGTGCCCTTTAAGTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR GCA 90 bp TCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTaGATCCCTTTCAGGGTAAACCTGAACTCAGGAGGCAAATTTCAT +
Preference number: 1 (lower is better)
Translates to: SELLLAEGVVRNRII*IPFRVNLNSGGKFH
Trigger: ATGAAATTTGCCTCCTGAGTTCAGGTTTACCCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR CCA 90 bp CACATTTGTGTTGAGATCTTGATTCCTGCTCTAACTACACAGGGCTaGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCC +
Preference number: 1 (lower is better)
Translates to: HICVEILIPALTTQG*DGHLLQVWPVIYFS
Trigger: GGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAGTTAGAGCAGGAATCAAGATCTCAACACAAATGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR TCA 90 bp TGCTCACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTaGTTGGCTGATGCCCTAACAGACCCAGGTTCTTCAGAAAGCCTT +
Preference number: 1 (lower is better)
Translates to: CSQFKPSFCLYLLVP*LADALTDPGSSESL
Trigger: AAGGCTTTCTGAAGAACCTGGGTCTGTTAGGGCATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTGAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR CCA 90 bp CACATTTGTGTTGAGATCTTGATTTCTGCTCTAACTACACAGGGCTaGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCC +
Preference number: 1 (lower is better)
Translates to: HICVEILISALTTQG*DGHLLQVWPVIYFS
Trigger: GGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAGTTAGAGCAGAAATCAAGATCTCAACACAAATGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000383226.4
3UTR TCA 90 bp AGAGATCAGAGATTGTTGGGTACACACGTATCTTGTGATGTCTTCTaGGAACCAACTTATTCCTCTTTCTCTGAGAAGAACTTGACCCCT +
Preference number: 1 (lower is better)
Translates to: RDQRLLGTHVSCDVF*EPTYSSFSEKNLTP
Trigger: AGGGGTCAAGTTCTTCTCAGAGAAAGAGGAATAAGTTGGTTCTCAGAAGACATCACAAGATACGTGTGTACCCAACAATCTCTGATCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR CCA 90 bp GTAAACCTGAACTCAGGAGGCAAATTTCATGAAGTCCATGTGAAATaGCTCATTCACAAAGTAACACACAATGGGCCAAATGGAGCAAGA +
Preference number: 1 (lower is better)
Translates to: VNLNSGGKFHEVHVK*LIHKVTHNGPNGAR
Trigger: TCTTGCTCCATTTGGCCCATTGTGTGTTACTTTGTGAATGAGCCATTTCACATGGACTTCATGAAATTTGCCTCCTGAGTTCAGGTTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGCACTTAAAGGGCACTaGGCACGCAGGGGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSALKGH*ARRGCH
Trigger: GTGACAGCCCCTGCGTGCTCAGTGCCCTTTAAGTGC...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
3UTR-3UTR TCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTGCACTTAAAGGGCACTaGGCACGCAGGGGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: REHRPCGSESVGGAALASALKGH*ARRGCH
Trigger: GTGACAGCCCCTGCGTGCTCAGTGCCCTTTAAGTGC...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACGCACTTAAAGGGCACTaGGCACGCAGGGGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDALKGH*ARRGCH
Trigger: GTGACAGCCCCTGCGTGCTCAGTGCCCTTTAAGTGC...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACCAGCCTCCCTGTTGCTaGCCCCTGCACTCCCGAGAT +
Preference number: 2 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHQPPCC*PLHSRD
Trigger: ATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTG...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
3UTR-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACGCAGTCCTGTCCCCTTaGCCTCCCAAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDAVLSP*PPKVLG
Trigger: TCCCAGCACTTTGGGAGGCCAAGGGGACAGGACTGC...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGATCCCCAGCACCACATaGCTCACCCCTGGAAGAACT +
Preference number: 2 (lower is better)
Translates to: EHRPCGSESVGGAALASLIPSTT*LTPGRT
Trigger: AGTTCTTCCAGGGGTGAGGCATGTGGTGCTGGGGAT...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGGCAATCTTGGCTCACTaGAGCCTTGAACTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: EHRPCGSESVGGAALASLAILAH*SLELLG
Trigger: GCCCAGGAGTTCAAGGCTGCAGTGAGCCAAGATTGC...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGAGTGAGCTGAGATCATaGCATGGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: EHRPCGSESVGGAALASLSELRS*HGTPAW
Trigger: CCAGGCTGGAGTGCCATGGCATGATCTCAGCTCACT...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACAAACCCAGGCAGGAGTaGAGTCCCCATGAGCCTGTC +
Preference number: 2 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDKPRQE*SPHEPV
Trigger: GACAGGCTCATGGGGACTCCACTCCTGCCTGGGTTT...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACGCAGTCCTGTCCCCTTaGCCTCCCAAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHAVLSP*PPKVLG
Trigger: TCCCAGCACTTTGGGAGGCCAAGGGGACAGGACTGC...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGGCTAAAATCTACCCTTaGGCCCTGCACTCCTCCCCA +
Preference number: 2 (lower is better)
Translates to: EHRPCGSESVGGAALASLAKIYP*ALHSSP
Trigger: TGGGGAGGAGTGCAGGGCCCAAGGGTAGATTTTAGC...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTGCTGTCACAAACCCATaGGGATCTGCAGGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: REHRPCGSESVGGAALASAVTNP*GSAGCL
Trigger: GAGACACCCTGCAGATCCTCATGGGTTTGTGACAGC...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACGCTGTCACAAACCCATaGGGATCTGCAGGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDAVTNP*GSAGCL
Trigger: GAGACACCCTGCAGATCCTCATGGGTTTGTGACAGC...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTAGGTGGAGGTTGCAGTaGGCTGAGATCATGCCATGG +
Preference number: 2 (lower is better)
Translates to: REHRPCGSESVGGAALASRWRLQ*AEIMPW
Trigger: CCATGGCATGATCTCAGCTCACTGCAACCTCCACCT...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAATCCCCAGCACCACATaGCTCACCCCTGGAAGAACT +
Preference number: 2 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSIPSTT*LTPGRT
Trigger: AGTTCTTCCAGGGGTGAGGCATGTGGTGCTGGGGAT...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGACAGGAATGAGCCACTaGACCAGGCCAATGCCTGTA +
Preference number: 2 (lower is better)
Translates to: EHRPCGSESVGGAALASLTGMSH*TRPMPV
Trigger: TACAGGCATTGGCCTGGTGCAGTGGCTCATTCCTGT...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTGCAATCTTGGCTCACTaGAGCCTTGAACTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: REHRPCGSESVGGAALASAILAH*SLELLG
Trigger: GCCCAGGAGTTCAAGGCTGCAGTGAGCCAAGATTGC...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGCAATCTTGGCTCACTaGAGCCTTGAACTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSAILAH*SLELLG
Trigger: GCCCAGGAGTTCAAGGCTGCAGTGAGCCAAGATTGC...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
3UTR-3UTR CCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGATGGTTTCCACCTCTTaGCCTCAAGCAGTCCTGTCC +
Preference number: 2 (lower is better)
Translates to: EHRPCGSESVGGAALASLMVSTS*PQAVLS
Trigger: GGACAGGACTGCTTGAGGCCAAGAGGTGGAAACCAT...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTAATGACAGCCTCGGCTaGGCACAGTGGCTAATGCCT +
Preference number: 2 (lower is better)
Translates to: REHRPCGSESVGGAALASNDSLG*AQWLMP
Trigger: AGGCATTAGCCACTGTGCCCAGCCGAGGCTGTCATT...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACGCAGTTCTGTCCCCTTaGCCTCCCAAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHAVLSP*PPKVLG
Trigger: TCCCAGCACTTTGGGAGGCCAAGGGGACAGAACTGC...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426685.2
3UTR-3UTR TCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGGCTGTCACAAACCCATaGGGATCTGCAGGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRAVTNP*GSAGCL
Trigger: GAGACACCCTGCAGATCCTCATGGGTTTGTGACAGC...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTGCACTTAAAGGGCACTaGGCACGCAGGGGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFALKGH*ARRGCH
Trigger: GTGACAGCCCCTGCGTGCTCAGTGCCCTTTAAGTGC...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGACCTCCTACCTAACATaGCTGACTCCACTGAGGGAA +
Preference number: 2 (lower is better)
Translates to: EHRPCGSESVGGAALASLTSYLT*LTPLRE
Trigger: TTCCCTCAGTGGAGTCAGTCATGTTAGGTAGGAGGT...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTTGTACCTTGATTGGCTaGTGCCCTAACAGACCCAGG +
Preference number: 2 (lower is better)
Translates to: REHRPCGSESVGGAALASCTLIG*CPNRPR
Trigger: CCTGGGTCTGTTAGGGCATCAGCCAATCAAGGTACA...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGAAACCCATGAGGATCTaGAGGGTGTCTCCCACAAGT +
Preference number: 2 (lower is better)
Translates to: EHRPCGSESVGGAALASLKPMRI*RVSPTS
Trigger: ACTTGTGGGAGACACCCTGCAGATCCTCATGGGTTT...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGATCCCCAGCACCACATaGCTCACCCCTGGAAGAACT +
Preference number: 2 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRIPSTT*LTPGRT
Trigger: AGTTCTTCCAGGGGTGAGGCATGTGGTGCTGGGGAT...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCATCCCCAGCACCACATaGCTCACCCCTGGAAGAACT +
Preference number: 2 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIIPSTT*LTPGRT
Trigger: AGTTCTTCCAGGGGTGAGGCATGTGGTGCTGGGGAT...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTATCCCCAGCACCACATaGCTCACCCCTGGAAGAACT +
Preference number: 2 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSIPSTT*LTPGRT
Trigger: AGTTCTTCCAGGGGTGAGGCATGTGGTGCTGGGGAT...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACACAGGAATGAGCCACTaGACCAGGCCAATGCCTGTA +
Preference number: 2 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDTGMSH*TRPMPV
Trigger: TACAGGCATTGGCCTGGTGCAGTGGCTCATTCCTGT...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTAAGGTCCAGGATGGCTaGATCAGAGTCATCCAGAGC +
Preference number: 2 (lower is better)
Translates to: REHRPCGSESVGGAALASKVQDG*IRVIQS
Trigger: GCTCTGGATGACTCTGATGCAGCCATCCTGGACCTT...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACGGGAGGGAAGGTGGGTaGATCACGAGGTCAAGAGAT +
Preference number: 2 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHGREGG*ITRSRD
Trigger: ATCTCTTGACCTCGTGATCCACCCACCTTCCCTCCC...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACCTTTGGGAGGGAAGGTaGGTGGATCACGAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHLWEGR*VDHEVK
Trigger: CTTGACCTCGTGATCCACCCACCTTCCCTCCCAAAG...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACTGGATCCGAGAGTGTTaGAGGGGCAGCTCTAGCTTC +
Preference number: 2 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHWIREC*RGSSSF
Trigger: GAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCA...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTGCACTTAAAGGGCACTaGGCACGCAGGGGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFALKGH*ARRGCH
Trigger: GTGACAGCCCCTGCGTGCTCAGTGCCCTTTAAGTGC...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACTGTACCTTGATTGGCTaGTGCCCTAACAGACCCAGG +
Preference number: 2 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHCTLIG*CPNRPR
Trigger: CCTGGGTCTGTTAGGGCATCAGCCAATCAAGGTACA...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACAAACCCATGAGGATCTaGAGGGTGTCTCCCACAAGT +
Preference number: 2 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDKPMRI*RVSPTS
Trigger: ACTTGTGGGAGACACCCTGCAGATCCTCATGGGTTT...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAAAACCCATGAGGATCTaGAGGGTGTCTCCCACAAGT +
Preference number: 2 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSKPMRI*RVSPTS
Trigger: ACTTGTGGGAGACACCCTGCAGATCCTCATGGGTTT...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACGTGTCCAACAAACCCTaGCATGAATACTGGGGCCAA +
Preference number: 2 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDVSNKP*HEYWGQ
Trigger: TTGGCCCCAGTATTCATGGCAGGGTTTGTTGGACAC...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTGTGTCCAACAAACCCTaGCATGAATACTGGGGCCAA +
Preference number: 2 (lower is better)
Translates to: REHRPCGSESVGGAALASVSNKP*HEYWGQ
Trigger: TTGGCCCCAGTATTCATGGCAGGGTTTGTTGGACAC...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACACAGGAATGAGCCACTaGACCAGGCCAATGCCTGTA +
Preference number: 2 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHTGMSH*TRPMPV
Trigger: TACAGGCATTGGCCTGGTGCAGTGGCTCATTCCTGT...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGCAGCCTCCCTGTTGCTaGCCCCTGCACTCCCGAGAT +
Preference number: 2 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLQPPCC*PLHSRD
Trigger: ATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTG...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
3UTR-3UTR GCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTTCTACCCTTGGGCCCTaGACTCCTCCCCATGGCTAT +
Preference number: 2 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFSTLGP*TPPHGY
Trigger: ATAGCCATGGGGAGGAGTGCAGGGCCCAAGGGTAGA...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCTCTACCCTTGGGCCCTaGACTCCTCCCCATGGCTAT +
Preference number: 2 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFSTLGP*TPPHGY
Trigger: ATAGCCATGGGGAGGAGTGCAGGGCCCAAGGGTAGA...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTAAACCCAGGCAGGAGTaGAGTCCCCATGAGCCTGTC +
Preference number: 2 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFKPRQE*SPHEPV
Trigger: GACAGGCTCATGGGGACTCCACTCCTGCCTGGGTTT...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATGCAGTCCTGTCCCCTTaGCCTCCCAAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNAVLSP*PPKVLG
Trigger: TCCCAGCACTTTGGGAGGCCAAGGGGACAGGACTGC...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACATGGTTTCCACCTCTTaGCCTCAAGCAGTCCTGTCC +
Preference number: 2 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHMVSTS*PQAVLS
Trigger: GGACAGGACTGCTTGAGGCCAAGAGGTGGAAACCAT...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGGTAATTCCAGTACTTTaGGAGGGAAGGTGGGTGGAT +
Preference number: 2 (lower is better)
Translates to: EHRPCGSESVGGAALASLVIPVL*EGRWVD
Trigger: ATCCACCCACCTTCCCTCCCAAAGTACTGGAATTAC...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCGCTGTCACAAACCCATaGGGATCTGCAGGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFAVTNP*GSAGCL
Trigger: GAGACACCCTGCAGATCCTCATGGGTTTGTGACAGC...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGGCACTTAAAGGGCACTaGGCACGCAGGGGCTGTCAC +
Preference number: 2 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLALKGH*ARRGCH
Trigger: GTGACAGCCCCTGCGTGCTCAGTGCCCTTTAAGTGC...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTACCTCCTACCTAACATaGCTGACTCCACTGAGGGAA +
Preference number: 2 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSTSYLT*LTPLRE
Trigger: TTCCCTCAGTGGAGTCAGTCATGTTAGGTAGGAGGT...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCGTGTCCAACAAACCCTaGCATGAATACTGGGGCCAA +
Preference number: 2 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIVSNKP*HEYWGQ
Trigger: TTGGCCCCAGTATTCATGGCAGGGTTTGTTGGACAC...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTATCCCCAGCACCACATaGCTCACCCCTGGAAGAACT +
Preference number: 2 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFIPSTT*LTPGRT
Trigger: AGTTCTTCCAGGGGTGAGGCATGTGGTGCTGGGGAT...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTGCAATCTTGGCTCACTaGAGCCTTGAACTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFAILAH*SLELLG
Trigger: GCCCAGGAGTTCAAGGCTGCAGTGAGCCAAGATTGC...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTAGTGAGCTGAGATCATaGCATGGCACTCCAGCCTGG +
Preference number: 2 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFSELRS*HGTPAW
Trigger: CCAGGCTGGAGTGCCATGGCATGATCTCAGCTCACT...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCCAGCCAGAGCTTTaGGTAGAGCAAGAATGTGTG +
Preference number: 2 (lower is better)
Translates to: QHPSELLLAEGVVRNRIICQPEL*VEQECV
Trigger: CACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCA...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAACACAATGGGCCAAATaGAGCAAGACACACCTGTGT +
Preference number: 2 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSTQWAK*SKTHLC
Trigger: ACACAGGTGTGTCTTGCTCCATTTGGCCCATTGTGT...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAACACAATGGGCCAAATaGAGCAAGACACACCTGTGT +
Preference number: 2 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSTQWAK*SKTHLC
Trigger: ACACAGGTGTGTCTTGCTCCATTTGGCCCATTGTGT...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
3UTR-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACACACAATGGGCCAAATaGAGCAAGACACACCTGTGT +
Preference number: 2 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDTQWAK*SKTHLC
Trigger: ACACAGGTGTGTCTTGCTCCATTTGGCCCATTGTGT...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATAAACCCAGGCAGGAGTaGAGTCCCCATGAGCCTGTC +
Preference number: 2 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNKPRQE*SPHEPV
Trigger: GACAGGCTCATGGGGACTCCACTCCTGCCTGGGTTT...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTAAGGAGATAACATCATaGCAGGATACCAGTGGCCTC +
Preference number: 2 (lower is better)
Translates to: REHRPCGSESVGGAALASKEITS*QDTSGL
Trigger: GAGGCCACTGGTATCCTGCCATGATGTTATCTCCTT...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTGGGAGGGAAGGTGGGTaGATCACGAGGTCAAGAGAT +
Preference number: 2 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFGREGG*ITRSRD
Trigger: ATCTCTTGACCTCGTGATCCACCCACCTTCCCTCCC...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTAATGACAGCCTCGGCTaGGCACAGTGGCTAATGCCT +
Preference number: 2 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFNDSLG*AQWLMP
Trigger: AGGCATTAGCCACTGTGCCCAGCCGAGGCTGTCATT...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGCTGCACTCCTCCCCATaGCTATATTGCAAATATCCT +
Preference number: 2 (lower is better)
Translates to: EHRPCGSESVGGAALASLLHSSP*LYCKYP
Trigger: AGGATATTTGCAATATAGCCATGGGGAGGAGTGCAG...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCGCTAAAATCTACCCTTaGGCCCTGCACTCCTCCCCA +
Preference number: 2 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFAKIYP*ALHSSP
Trigger: TGGGGAGGAGTGCAGGGCCCAAGGGTAGATTTTAGC...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACTCCGAGTTCTGTTCCTaGGAGGCCTGGCTAAAATCT +
Preference number: 2 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHSEFCS*EAWLKS
Trigger: AGATTTTAGCCAGGCCTCCCAGGAACAGAACTCGGA...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCTGTACCTTGATTGGCTaGTGCCCTAACAGACCCAGG +
Preference number: 2 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFCTLIG*CPNRPR
Trigger: CCTGGGTCTGTTAGGGCATCAGCCAATCAAGGTACA...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGCCTATACTTTGCATGTaGTCACACAAAGAGGGTTTC +
Preference number: 2 (lower is better)
Translates to: EHRPCGSESVGGAALASLPILCM*SHKEGF
Trigger: GAAACCCTCTTTGTGTGATCACATGCAAAGTATAGG...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTACAGGAATGAGCCACTaGACCAGGCCAATGCCTGTA +
Preference number: 2 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFTGMSH*TRPMPV
Trigger: TACAGGCATTGGCCTGGTGCAGTGGCTCATTCCTGT...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCAAGGTCCAGGATGGCTaGATCAGAGTCATCCAGAGC +
Preference number: 2 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFKVQDG*IRVIQS
Trigger: GCTCTGGATGACTCTGATGCAGCCATCCTGGACCTT...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTTTTTCCAGGACCAACTaGTCACAGTTCAAACCCTCA +
Preference number: 2 (lower is better)
Translates to: REHRPCGSESVGGAALASFSRTN*SQFKPS
Trigger: TGAGGGTTTGAACTGTGAGCAGTTGGTCCTGGAAAA...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGACACAATGGGCCAAATaGAGCAAGACACACCTGTGT +
Preference number: 2 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRTQWAK*SKTHLC
Trigger: ACACAGGTGTGTCTTGCTCCATTTGGCCCATTGTGT...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGCAAAGTAACACACAATaGGCCAAATGGAGCAAGACA +
Preference number: 2 (lower is better)
Translates to: EHRPCGSESVGGAALASLQSNTQ*AKWSKT
Trigger: TGTCTTGCTCCATTTGGCCCATTGTGTGTTACTTTG...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACACCTTATCCAAGCCTTaGGCCTCTCTTTATCATGCA +
Preference number: 2 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDTLSKP*ASLYHA
Trigger: TGCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGT...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATGCTGAGATCATGCCATaGCACTCCAGCCTGGTGACA +
Preference number: 2 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNAEIMP*HSSLVT
Trigger: TGTCACCAGGCTGGAGTGCCATGGCATGATCTCAGC...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATCTTTGGGAGGGAAGGTaGGTGGATCACGAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNLWEGR*VDHEVK
Trigger: CTTGACCTCGTGATCCACCCACCTTCCCTCCCAAAG...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATAATGACAGCCTCGGCTaGGCACAGTGGCTAATGCCT +
Preference number: 2 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNNDSLG*AQWLMP
Trigger: AGGCATTAGCCACTGTGCCCAGCCGAGGCTGTCATT...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp ATCTTGATTTCTGCTCTAACTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGTTCCTGGGAGGCCTaGCTAAAATCTACCCTTGGG +
Preference number: 2 (lower is better)
Translates to: ILISALTTQGWDGHLLQVCSWEA*LKSTLG
Trigger: CCCAAGGGTAGATTTTAGCCAGGCCTCCCAGGAACA...AACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAGTTAGAGCAGAAATCAAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383226.4
3UTR-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTTGTTCCTGGGAGGCCTaGCTAAAATCTACCCTTGGG +
Preference number: 2 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFCSWEA*LKSTLG
Trigger: CCCAAGGGTAGATTTTAGCCAGGCCTCCCAGGAACA...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGTTCATGAAGTCCATGTaGAATGGCTCATTCACAAAG +
Preference number: 2 (lower is better)
Translates to: EHRPCGSESVGGAALASLFMKSM*NGSFTK
Trigger: CTTTGTGAATGAGCCATTTCACATGGACTTCATGAA...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAAGGAGGCAAATTTCATaGAGTCCATGTGAAATGGCT +
Preference number: 2 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSRRQIS*SPCEMA
Trigger: AGCCATTTCACATGGACTTCATGAAATTTGCCTCCT...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
3UTR-3UTR TCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATTGTACCTTGATTGGCTaGTGCCCTAACAGACCCAGG +
Preference number: 2 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNCTLIG*CPNRPR
Trigger: CCTGGGTCTGTTAGGGCATCAGCCAATCAAGGTACA...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGTATTTACTTGTACCTTaGTTGGCTGATGCCCTAACA +
Preference number: 2 (lower is better)
Translates to: EHRPCGSESVGGAALASLYLLVP*LADALT
Trigger: TGTTAGGGCATCAGCCAATCAAGGTACAAGTAAATA...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCAGCCTGGTGACAGAGTaGGACTCCTTCTCAGAAAAG +
Preference number: 2 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFSLVTE*DSFSEK
Trigger: CTTTTCTGAGAAGGAGTCTCACTCTGTCACCAGGCT...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434335.2
3UTR-3UTR GCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGATCCCCAGCACCACATaGCTCACCCCTGGAAGAACT +
Preference number: 2 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLIPSTT*LTPGRT
Trigger: AGTTCTTCCAGGGGTGAGGCATGTGGTGCTGGGGAT...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAAGGAACAGGATAATCTaGATCCCTTTCAGGGTAAAC +
Preference number: 2 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSRNRII*IPFRVN
Trigger: GTTTACCCTGAAAGGGATGCAGATTATCCTGTTCCT...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTACAGGAATGAGCCACTaGACCAGGCCAATGCCTGTA +
Preference number: 2 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFTGMSH*TRPMPV
Trigger: TACAGGCATTGGCCTGGTGCAGTGGCTCATTCCTGT...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATAAGGTCCAGGATGGCTaGATCAGAGTCATCCAGAGC +
Preference number: 2 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNKVQDG*IRVIQS
Trigger: GCTCTGGATGACTCTGATGCAGCCATCCTGGACCTT...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACTTTTCCAGGACCAACTaGTCACAGTTCAAACCCTCA +
Preference number: 2 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHFSRTN*SQFKPS
Trigger: TGAGGGTTTGAACTGTGAGCAGTTGGTCCTGGAAAA...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCAAAGTAACACACAATaGGCCAAATGGAGCAAGACA +
Preference number: 2 (lower is better)
Translates to: REHRPCGSESVGGAALASQSNTQ*AKWSKT
Trigger: TGTCTTGCTCCATTTGGCCCATTGTGTGTTACTTTG...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTACCTTATCCAAGCCTTaGGCCTCTCTTTATCATGCA +
Preference number: 2 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSTLSKP*ASLYHA
Trigger: TGCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGT...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGGCAGTCCTGTCCCCTTaGCCTCCCAAAGTGCTGGGA +
Preference number: 2 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMAVLSP*PPKVLG
Trigger: TCCCAGCACTTTGGGAGGCCAAGGGGACAGGACTGC...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTATGGTTTCCACCTCTTaGCCTCAAGCAGTCCTGTCC +
Preference number: 2 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFMVSTS*PQAVLS
Trigger: GGACAGGACTGCTTGAGGCCAAGAGGTGGAAACCAT...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGGCGAGCCACCATGCCTaGTTAATTTTTAAATCTTTC +
Preference number: 2 (lower is better)
Translates to: EHRPCGSESVGGAALASLASHHA*LIFKSF
Trigger: GAAAGATTTAAAAATTAACCAGGCATGGTGGCTCGC...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGCACGAGGTCAAGAGATaGAGGCCATCCTGGCCAACA +
Preference number: 2 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLHEVKR*RPSWPT
Trigger: TGTTGGCCAGGATGGCCTCCATCTCTTGACCTCGTG...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGGGGAGGGAAGGTGGGTaGATCACGAGGTCAAGAGAT +
Preference number: 2 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLGREGG*ITRSRD
Trigger: ATCTCTTGACCTCGTGATCCACCCACCTTCCCTCCC...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGCTTTGGGAGGGAAGGTaGGTGGATCACGAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLLWEGR*VDHEVK
Trigger: CTTGACCTCGTGATCCACCCACCTTCCCTCCCAAAG...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTGAGGGTTTCTGTTACTaGCACACAAAAAGTTTGCCT +
Preference number: 2 (lower is better)
Translates to: REHRPCGSESVGGAALASEGFCY*HTKSLP
Trigger: AGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTC...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCATTCATGAAGTCCATGTaGAATGGCTCATTCACAAAG +
Preference number: 2 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSFMKSM*NGSFTK
Trigger: CTTTGTGAATGAGCCATTTCACATGGACTTCATGAA...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
3UTR-3UTR TCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCAGGAGGCAAATTTCATaGAGTCCATGTGAAATGGCT +
Preference number: 2 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIRRQIS*SPCEMA
Trigger: AGCCATTTCACATGGACTTCATGAAATTTGCCTCCT...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTAGGAGGCAAATTTCATaGAGTCCATGTGAAATGGCT +
Preference number: 2 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSRRQIS*SPCEMA
Trigger: AGCCATTTCACATGGACTTCATGAAATTTGCCTCCT...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATACCTCCTACCTAACATaGCTGACTCCACTGAGGGAA +
Preference number: 2 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNTSYLT*LTPLRE
Trigger: TTCCCTCAGTGGAGTCAGTCATGTTAGGTAGGAGGT...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTAAACCCATGAGGATCTaGAGGGTGTCTCCCACAAGT +
Preference number: 2 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFKPMRI*RVSPTS
Trigger: ACTTGTGGGAGACACCCTGCAGATCCTCATGGGTTT...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGTCCCCATGGCTATATTaGAAATATCCTATACTTTGC +
Preference number: 2 (lower is better)
Translates to: EHRPCGSESVGGAALASLSPWLY*KYPILC
Trigger: GCAAAGTATAGGATATTTGCAATATAGCCATGGGGA...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTTGCCAGCCAGAGCTTTaGGTAGAGCAAGAATGTGTG +
Preference number: 2 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFCQPEL*VEQECV
Trigger: CACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCA...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATTGCCAGCCAGAGCTTTaGGTAGAGCAAGAATGTGTG +
Preference number: 2 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNCQPEL*VEQECV
Trigger: CACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCA...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCACACAATGGGCCAAATaGAGCAAGACACACCTGTGT +
Preference number: 2 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFTQWAK*SKTHLC
Trigger: ACACAGGTGTGTCTTGCTCCATTTGGCCCATTGTGT...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCCAAAGTAACACACAATaGGCCAAATGGAGCAAGACA +
Preference number: 2 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIQSNTQ*AKWSKT
Trigger: TGTCTTGCTCCATTTGGCCCATTGTGTGTTACTTTG...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTCAAAGTAACACACAATaGGCCAAATGGAGCAAGACA +
Preference number: 2 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSQSNTQ*AKWSKT
Trigger: TGTCTTGCTCCATTTGGCCCATTGTGTGTTACTTTG...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGTCCATCAGGGTCTTCTaGTCATTGATTTCAACTTAT +
Preference number: 2 (lower is better)
Translates to: EHRPCGSESVGGAALASLSIRVF*SLISTY
Trigger: ATAAGTTGAAATCAATGACCAGAAGACCCTGATGGA...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACGAGGGTTTCTGTTACTaGCACACAAAAAGTTTGCCT +
Preference number: 2 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHEGFCY*HTKSLP
Trigger: AGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTC...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACGCGAGCCACCATGGCTaGTTAATTTTTAAATCTTTC +
Preference number: 2 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDASHHG*LIFKSF
Trigger: GAAAGATTTAAAAATTAACCAGCCATGGTGGCTCGC...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383226.4
ENST00000426685.2
ENST00000434335.2
3UTR-3UTR TCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGTTCATGAAGTCCATGTaGAATGGCTCATTCACAAAG +
Preference number: 2 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRFMKSM*NGSFTK
Trigger: CTTTGTGAATGAGCCATTTCACATGGACTTCATGAA...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTTCATGAAGTCCATGTaGAATGGCTCATTCACAAAG +
Preference number: 2 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIFMKSM*NGSFTK
Trigger: CTTTGTGAATGAGCCATTTCACATGGACTTCATGAA...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGAGGTGGAGGTTGCAGTaGGCTGAGATCATGCCATGG +
Preference number: 2 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMRWRLQ*AEIMPW
Trigger: CCATGGCATGATCTCAGCTCACTGCAACCTCCACCT...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGAAACCCATGAGGATCTaGAGGGTGTCTCCCACAAGT +
Preference number: 2 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLKPMRI*RVSPTS
Trigger: ACTTGTGGGAGACACCCTGCAGATCCTCATGGGTTT...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGGTGTCCAACAAACCCTaGCATGAATACTGGGGCCAA +
Preference number: 2 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLVSNKP*HEYWGQ
Trigger: TTGGCCCCAGTATTCATGGCAGGGTTTGTTGGACAC...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTTTTTCCAGGACCAACTaGTCACAGTTCAAACCCTCA +
Preference number: 2 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFFSRTN*SQFKPS
Trigger: TGAGGGTTTGAACTGTGAGCAGTTGGTCCTGGAAAA...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
47% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGTGCCAGCCAGAGCTTTaGGTAGAGCAAGAATGTGTG +
Preference number: 2 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLCQPEL*VEQECV
Trigger: CACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCA...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATACACAATGGGCCAAATaGAGCAAGACACACCTGTGT +
Preference number: 2 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNTQWAK*SKTHLC
Trigger: ACACAGGTGTGTCTTGCTCCATTTGGCCCATTGTGT...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAGAAGTCCATGTGAAATaGCTCATTCACAAAGTAACA +
Preference number: 2 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSEVHVK*LIHKVT
Trigger: TGTTACTTTGTGAATGAGCCATTTCACATGGACTTC...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTGAAGTCCATGTGAAATaGCTCATTCACAAAGTAACA +
Preference number: 2 (lower is better)
Translates to: REHRPCGSESVGGAALASEVHVK*LIHKVT
Trigger: TGTTACTTTGTGAATGAGCCATTTCACATGGACTTC...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATAAGGAGATAACATCATaGCAGGATACCAGTGGCCTC +
Preference number: 2 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNKEITS*QDTSGL
Trigger: GAGGCCACTGGTATCCTGCCATGATGTTATCTCCTT...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCACCTTATCCAAGCCTTaGGCCTCTCTTTATCATGCA +
Preference number: 2 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFTLSKP*ASLYHA
Trigger: TGCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGT...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGTTCTTATGTGCATTCTaGTTTGAAAACCGTAATCTG +
Preference number: 2 (lower is better)
Translates to: EHRPCGSESVGGAALASLFLCAF*FENRNL
Trigger: CAGATTACGGTTTTCAAACCAGAATGCACATAAGAA...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGGCTGAGATCATGCCATaGCACTCCAGCCTGGTGACA +
Preference number: 2 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMAEIMP*HSSLVT
Trigger: TGTCACCAGGCTGGAGTGCCATGGCATGATCTCAGC...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGGGGAGGGAAGGTGGGTaGATCACGAGGTCAAGAGAT +
Preference number: 2 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMGREGG*ITRSRD
Trigger: ATCTCTTGACCTCGTGATCCACCCACCTTCCCTCCC...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGCTTTGGGAGGGAAGGTaGGTGGATCACGAGGTCAAG +
Preference number: 2 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMLWEGR*VDHEVK
Trigger: CTTGACCTCGTGATCCACCCACCTTCCCTCCCAAAG...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATGTAATTCCAGTACTTTaGGAGGGAAGGTGGGTGGAT +
Preference number: 2 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNVIPVL*EGRWVD
Trigger: ATCCACCCACCTTCCCTCCCAAAGTACTGGAATTAC...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR CAA 90 bp GGCCCTGCACTCCTCCCCATGGCTATATTGCAAATATCCTATACTTaGCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAA +
Preference number: 2 (lower is better)
Translates to: GPALLPMAILQISYT*HVITQRGFLLLAHK
Trigger: TTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGCAAAGTATAGGATATTTGCAATATAGCCATGGGGAGGAGTGCAGGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATGCTGTCACAAACCCATaGGGATCTGCAGGGTGTCTC +
Preference number: 2 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHAVTNP*GSAGCL
Trigger: GAGACACCCTGCAGATCCTCATGGGTTTGTGACAGC...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCAGGAGGCAAATTTCATaGAGTCCATGTGAAATGGCT +
Preference number: 2 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFRRQIS*SPCEMA
Trigger: AGCCATTTCACATGGACTTCATGAAATTTGCCTCCT...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCTATACTTTGCATGTaGTCACACAAAGAGGGTTTC +
Preference number: 2 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFPILCM*SHKEGF
Trigger: GAAACCCTCTTTGTGTGATCACATGCAAAGTATAGG...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCAGTAATTTAAAGCTGTaGCTAGGAGACACAGCCTCT +
Preference number: 2 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFSNLKL*LGDTAS
Trigger: AGAGGCTGTGTCTCCTAGTCACAGCTTTAAATTACT...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp ATCTTGATTTCTGCTCTAACTACACAGGGCTGGGATGGACACCTGCTCCAAGTTAGGAACAGGATAATCTaGATCCCTTTCAGGGTAAAC +
Preference number: 2 (lower is better)
Translates to: ILISALTTQGWDGHLLQVRNRII*IPFRVN
Trigger: GTTTACCCTGAAAGGGATGCAGATTATCCTGTTCCT...AACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAGTTAGAGCAGAAATCAAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383226.4
3UTR-3UTR GCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCAGGAACAGGATAATCTaGATCCCTTTCAGGGTAAAC +
Preference number: 2 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFRNRII*IPFRVN
Trigger: GTTTACCCTGAAAGGGATGCAGATTATCCTGTTCCT...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGACAGGAATGAGCCACTaGACCAGGCCAATGCCTGTA +
Preference number: 2 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMTGMSH*TRPMPV
Trigger: TACAGGCATTGGCCTGGTGCAGTGGCTCATTCCTGT...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGACACAATGGGCCAAATaGAGCAAGACACACCTGTGT +
Preference number: 2 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLTQWAK*SKTHLC
Trigger: ACACAGGTGTGTCTTGCTCCATTTGGCCCATTGTGT...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCAAAGTAACACACAATaGGCCAAATGGAGCAAGACA +
Preference number: 2 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFQSNTQ*AKWSKT
Trigger: TGTCTTGCTCCATTTGGCCCATTGTGTGTTACTTTG...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGGAAGTCCATGTGAAATaGCTCATTCACAAAGTAACA +
Preference number: 2 (lower is better)
Translates to: LLLAEGVVRNRIICIPFREVHVK*LIHKVT
Trigger: TGTTACTTTGTGAATGAGCCATTTCACATGGACTTC...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTGAAGTCCATGTGAAATaGCTCATTCACAAAGTAACA +
Preference number: 2 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSEVHVK*LIHKVT
Trigger: TGTTACTTTGTGAATGAGCCATTTCACATGGACTTC...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACGAAGTCCATGTGAAATaGCTCATTCACAAAGTAACA +
Preference number: 2 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHEVHVK*LIHKVT
Trigger: TGTTACTTTGTGAATGAGCCATTTCACATGGACTTC...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCATTCTTATGTGCATTCTaGTTTGAAAACCGTAATCTG +
Preference number: 2 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSFLCAF*FENRNL
Trigger: CAGATTACGGTTTTCAAACCAGAATGCACATAAGAA...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
3UTR-3UTR CCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGATGGTTTCCACCTCTTaGCCTCAAGCAGTCCTGTCC +
Preference number: 2 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMMVSTS*PQAVLS
Trigger: GGACAGGACTGCTTGAGGCCAAGAGGTGGAAACCAT...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGGTAATTCCAGTACTTTaGGAGGGAAGGTGGGTGGAT +
Preference number: 2 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLVIPVL*EGRWVD
Trigger: ATCCACCCACCTTCCCTCCCAAAGTACTGGAATTAC...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTGAGGGTTTCTGTTACTaGCACACAAAAAGTTTGCCT +
Preference number: 2 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFEGFCY*HTKSLP
Trigger: AGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTC...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCTATTTACTTGTACCTTaGTTGGCTGATGCCCTAACA +
Preference number: 2 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFYLLVP*LADALT
Trigger: TGTTAGGGCATCAGCCAATCAAGGTACAAGTAAATA...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATAGGAACAGGATAATCTaGATCCCTTTCAGGGTAAAC +
Preference number: 2 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNRNRII*IPFRVN
Trigger: GTTTACCCTGAAAGGGATGCAGATTATCCTGTTCCT...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR GCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTAGGAACAGGATAATCTaGATCCCTTTCAGGGTAAAC +
Preference number: 2 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFRNRII*IPFRVN
Trigger: GTTTACCCTGAAAGGGATGCAGATTATCCTGTTCCT...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGTGCCAGCCAGAGCTTTaGGTAGAGCAAGAATGTGTG +
Preference number: 2 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMCQPEL*VEQECV
Trigger: CACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCA...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTTTCTTATGTGCATTCTaGTTTGAAAACCGTAATCTG +
Preference number: 2 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSFLCAF*FENRNL
Trigger: CAGATTACGGTTTTCAAACCAGAATGCACATAAGAA...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTGCGAGCCACCATGGCTaGTTAATTTTTAAATCTTTC +
Preference number: 2 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFASHHG*LIFKSF
Trigger: GAAAGATTTAAAAATTAACCAGCCATGGTGGCTCGC...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383226.4
ENST00000426685.2
ENST00000434335.2
3UTR-3UTR TCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATTTCATGAAGTCCATGTaGAATGGCTCATTCACAAAG +
Preference number: 2 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNFMKSM*NGSFTK
Trigger: CTTTGTGAATGAGCCATTTCACATGGACTTCATGAA...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCGAAGTCCATGTGAAATaGCTCATTCACAAAGTAACA +
Preference number: 2 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFEVHVK*LIHKVT
Trigger: TGTTACTTTGTGAATGAGCCATTTCACATGGACTTC...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCTCCATCAGGGTCTTCTaGTCATTGATTTCAACTTAT +
Preference number: 2 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFSIRVF*SLISTY
Trigger: ATAAGTTGAAATCAATGACCAGAAGACCCTGATGGA...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTTCCATCAGGGTCTTCTaGTCATTGATTTCAACTTAT +
Preference number: 2 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFSIRVF*SLISTY
Trigger: ATAAGTTGAAATCAATGACCAGAAGACCCTGATGGA...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATGCGAGCCACCATGGCTaGTTAATTTTTAAATCTTTC +
Preference number: 2 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNASHHG*LIFKSF
Trigger: GAAAGATTTAAAAATTAACCAGCCATGGTGGCTCGC...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000383226.4
ENST00000426685.2
ENST00000434335.2
3UTR-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGGCGAGCCACCATGCCTaGTTAATTTTTAAATCTTTC +
Preference number: 2 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLASHHA*LIFKSF
Trigger: GAAAGATTTAAAAATTAACCAGGCATGGTGGCTCGC...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGAGGAGGCAAATTTCATaGAGTCCATGTGAAATGGCT +
Preference number: 2 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMRRQIS*SPCEMA
Trigger: AGCCATTTCACATGGACTTCATGAAATTTGCCTCCT...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGCAAAGTAACACACAATaGGCCAAATGGAGCAAGACA +
Preference number: 2 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMQSNTQ*AKWSKT
Trigger: TGTCTTGCTCCATTTGGCCCATTGTGTGTTACTTTG...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATCAAAGTAACACACAATaGGCCAAATGGAGCAAGACA +
Preference number: 2 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHQSNTQ*AKWSKT
Trigger: TGTCTTGCTCCATTTGGCCCATTGTGTGTTACTTTG...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR TCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATTTCATGAAGTCCATGTaGAATGGCTCATTCACAAAG +
Preference number: 2 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHFMKSM*NGSFTK
Trigger: CTTTGTGAATGAGCCATTTCACATGGACTTCATGAA...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR CCA 72 bp GGGCTTTTCGGATCCGAGTTCTGTTCCTGGGAGGCCTaGCTAAAATCTACCCTTGGGCCCTGCACTCCTCCC +
Preference number: 3 (lower is better)
Translates to: GLFGSEFCSWEA*LKSTLGPCTPP
Trigger: GGGAGGAGTGCAGGGCCCAAGGGTAGATTTTAGCCAGGCCTCCCAGGAACAGAACTCGGATCCGAAAAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTAGCAGTCCTGTCCCCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: REHRPCGSESVGGAALASSSPVP*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGGGGACAGGACTGCT...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp CCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTTCTGTCCCCTTGGCCTCCCACACCCTTCAGAACTGTaGTTAGCTGAGGGGGTCGTG +
Preference number: 3 (lower is better)
Translates to: PRWFPPLGLKQFCPLGLPHPSEL*LAEGVV
Trigger: CACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTG...TGGGAGGCCAAGGGGACAGAACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426685.2
3UTR-3UTR CAA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGAGTCCACCTCAGACCTaGGGGATCCCCCTTTCCCAT +
Preference number: 3 (lower is better)
Translates to: EHRPCGSESVGGAALASLSPPQT*GIPLSH
Trigger: ATGGGAAAGGGGGATCCCCAAGGTCTGAGGTGGACT...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR CCA 72 bp AGCTTCTCTGGGCTTTTCGGATCCGAGTTCTGTTCCTaGGAGGCCTGGCTAAAATCTACCCTTGGGCCCTGC +
Preference number: 3 (lower is better)
Translates to: SFSGLFGSEFCS*EAWLKSTLGPC
Trigger: GCAGGGCCCAAGGGTAGATTTTAGCCAGGCCTCCCAGGAACAGAACTCGGATCCGAAAAGCCCAGAGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTAAGACAGCCTCCCTGTaGCTGCCCCCTGCACTCCCG +
Preference number: 3 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFKTASL*LPPALP
Trigger: CGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTT...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
3UTR TCA 72 bp GCCCCGGGGCTGAGTGCTTGGCAGCCACATTTGTGTTaGGATCTTGATTCCTGCTCTAACTACACAGGGCTG +
Preference number: 3 (lower is better)
Translates to: APGLSAWQPHLC*DLDSCSNYTGL
Trigger: CAGCCCTGTGTAGTTAGAGCAGGAATCAAGATCTCAACACAAATGTGGCTGCCAAGCACTCAGCCCCGGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCACACCCTTCAGAACTGTaGTTAGCTGAGGGGGTCGTG +
Preference number: 3 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSHPSEL*LAEGVV
Trigger: CACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTG...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCAGCAGTCCTGTCCCCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFSSPVP*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGGGGACAGGACTGCT...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACGATGGTTTCCACCTCTaGGCCTCAAGCAGTCCTGTC +
Preference number: 3 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDDGFHL*ASSSPV
Trigger: GACAGGACTGCTTGAGGCCAAGAGGTGGAAACCATC...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTAGGCAGGAGAATGGCTaGAACTCAGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: REHRPCGSESVGGAALASRQENG*NSGGGG
Trigger: ACCTCCACCTCCTGAGTTCAAGCCATTCTCCTGCCT...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR CCA 72 bp GTTCTGTTCCTGGGAGGCCTGGCTAAAATCTACCCTTaGGCCCTGCACTCCTCCCCATGGCTATATTGCAAA +
Preference number: 3 (lower is better)
Translates to: VLFLGGLAKIYP*ALHSSPWLYCK
Trigger: TTTGCAATATAGCCATGGGGAGGAGTGCAGGGCCCAAGGGTAGATTTTAGCCAGGCCTCCCAGGAACAGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCACTGCCAGCCAGAGCTTaGGGTAGAGCAAGAATGTGT +
Preference number: 3 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSLPARA*GRARMC
Trigger: ACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCAG...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
3UTR-3UTR CAA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGCCAGCCAGAGCTTaGGGTAGAGCAAGAATGTGT +
Preference number: 3 (lower is better)
Translates to: REHRPCGSESVGGAALASLPARA*GRARMC
Trigger: ACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCAG...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATAGCAGTCCTGTCCCCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNSSPVP*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGGGGACAGGACTGCT...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGAAGACAGCCTCCCTGTaGCTGCCCCCTGCACTCCCG +
Preference number: 3 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLKTASL*LPPALP
Trigger: CGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTT...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
3UTR GCA 72 bp TCCTGGGAGGCCTGGCTAAAATCTACCCTTGGGCCCTaGACTCCTCCCCATGGCTATATTGCAAATATCCTA +
Preference number: 3 (lower is better)
Translates to: SWEAWLKSTLGP*TPPHGYIANIL
Trigger: TAGGATATTTGCAATATAGCCATGGGGAGGAGTGCAGGGCCCAAGGGTAGATTTTAGCCAGGCCTCCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR GCA 72 bp GAGACTCCTTCTCAGAAAAGACAGCCTCCCTGTTGCTaGCCCCTGCACTCCCGAGATTCTAATTCAGTAGGT +
Preference number: 3 (lower is better)
Translates to: ETPSQKRQPPCC*PLHSRDSNSVG
Trigger: ACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTGAGAAGGAGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434335.2
3UTR CCA 72 bp ACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTaGGCCTCTCTTTATCATGCATGGGACTCTAGGGAA +
Preference number: 3 (lower is better)
Translates to: TPLREVATLSKP*ASLYHAWDSRE
Trigger: TTCCCTAGAGTCCCATGCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACCACCTTATCCAAGCCTaGGGCCTCTCTTTATCATGC +
Preference number: 3 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDHLIQA*GLSLSC
Trigger: GCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGTG...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCACACCTTATCCAAGCCTaGGGCCTCTCTTTATCATGC +
Preference number: 3 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSHLIQA*GLSLSC
Trigger: GCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGTG...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
3UTR-3UTR CAA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCACCTTATCCAAGCCTaGGGCCTCTCTTTATCATGC +
Preference number: 3 (lower is better)
Translates to: REHRPCGSESVGGAALASHLIQA*GLSLSC
Trigger: GCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGTG...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGAGCAGTCCTGTCCCCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 3 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLSSPVP*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGGGGACAGGACTGCT...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCAGTCCACCTCAGACCTaGGGGATCCCCCTTTCCCAT +
Preference number: 3 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFSPPQT*GIPLSH
Trigger: ATGGGAAAGGGGGATCCCCAAGGTCTGAGGTGGACT...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTAGTCCACCTCAGACCTaGGGGATCCCCCTTTCCCAT +
Preference number: 3 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFSPPQT*GIPLSH
Trigger: ATGGGAAAGGGGGATCCCCAAGGTCTGAGGTGGACT...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTCTCTTACGAGATACCTaGCAGACCGACTCTACCACC +
Preference number: 3 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSLLRDT*QTDSTT
Trigger: GGTGGTAGAGTCGGTCTGCAAGGTATCTCGTAAGAG...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCACCCTTCAGAACTGTaGTTAGCTGAGGGGGTCGTG +
Preference number: 3 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFHPSEL*LAEGVV
Trigger: CACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTG...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTCACCTTATCCAAGCCTaGGGCCTCTCTTTATCATGC +
Preference number: 3 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSHLIQA*GLSLSC
Trigger: GCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGTG...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTGATGGTTTCCACCTCTaGGCCTCAAGCAGTCCTGTC +
Preference number: 3 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFDGFHL*ASSSPV
Trigger: GACAGGACTGCTTGAGGCCAAGAGGTGGAAACCATC...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR GCA 72 bp TTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTaGATCCCTTTCAGGGTAAACCTGAACTCAGGAGGC +
Preference number: 3 (lower is better)
Translates to: LLAEGVVRNRII*IPFRVNLNSGG
Trigger: GCCTCCTGAGTTCAGGTTTACCCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR GCA 72 bp TCCAGTTACCAGACCACAGCCAAGGTCCAGGATGGCTaGATCAGAGTCATCCAGAGCCGGTTAAAAATGACA +
Preference number: 3 (lower is better)
Translates to: SSYQTTAKVQDG*IRVIQSRLKMT
Trigger: TGTCATTTTTAACCGGCTCTGGATGACTCTGATGCAGCCATCCTGGACCTTGGCTGTGGTCTGGTAACTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR GCA 72 bp AGTGAGACTCCTTCTCAGAAAAGACAGCCTCCCTGTTaGTGCCCCCTGCACTCCCGAGATTCTAATTCAGTA +
Preference number: 3 (lower is better)
Translates to: SETPSQKRQPPC*CPLHSRDSNSV
Trigger: TACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTGAGAAGGAGTCTCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434335.2
3UTR-3UTR CAA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATCACCCTTCAGAACTGTaGTTAGCTGAGGGGGTCGTG +
Preference number: 3 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNHPSEL*LAEGVV
Trigger: CACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTG...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATGATGGTTTCCACCTCTaGGCCTCAAGCAGTCCTGTC +
Preference number: 3 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNDGFHL*ASSSPV
Trigger: GACAGGACTGCTTGAGGCCAAGAGGTGGAAACCATC...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATAGGCAGGAGAATGGCTaGAACTCAGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNRQENG*NSGGGG
Trigger: ACCTCCACCTCCTGAGTTCAAGCCATTCTCCTGCCT...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTCTTAAGAAGCCCATaGAGTCCCCATAATCTCTTG +
Preference number: 3 (lower is better)
Translates to: REHRPCGSESVGGAALASLLRSP*SPHNLL
Trigger: CAAGAGATTATGGGGACTCAATGGGCTTCTTAAGAG...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR CCA 72 bp CCATGTGAAATGGCTCATTCACAAAGTAACACACAATaGGCCAAATGGAGCAAGACACACCTGTGTGGGCCC +
Preference number: 3 (lower is better)
Translates to: PCEMAHSQSNTQ*AKWSKTHLCGP
Trigger: GGGCCCACACAGGTGTGTCTTGCTCCATTTGGCCCATTGTGTGTTACTTTGTGAATGAGCCATTTCACATGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR CCA 72 bp GTTGAGATCTTGATTCCTGCTCTAACTACACAGGGCTaGGATGGACACCTGCTCCAAGTTTGGCCAGTCATT +
Preference number: 3 (lower is better)
Translates to: VEILIPALTTQG*DGHLLQVWPVI
Trigger: AATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAGTTAGAGCAGGAATCAAGATCTCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATCTGCCAGCCAGAGCTTaGGGTAGAGCAAGAATGTGT +
Preference number: 3 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNLPARA*GRARMC
Trigger: ACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCAG...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTCTGCCAGCCAGAGCTTaGGGTAGAGCAAGAATGTGT +
Preference number: 3 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFLPARA*GRARMC
Trigger: ACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCAG...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGGATGGTTTCCACCTCTaGGCCTCAAGCAGTCCTGTC +
Preference number: 3 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLDGFHL*ASSSPV
Trigger: GACAGGACTGCTTGAGGCCAAGAGGTGGAAACCATC...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGAGGCAGGAGAATGGCTaGAACTCAGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLRQENG*NSGGGG
Trigger: ACCTCCACCTCCTGAGTTCAAGCCATTCTCCTGCCT...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTCTCTTACGAGATACCTaGCAGACCGACTCTACCACC +
Preference number: 3 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFLLRDT*QTDSTT
Trigger: GGTGGTAGAGTCGGTCTGCAAGGTATCTCGTAAGAG...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000452598.2
3UTR CCA 72 bp GTTGAGATCTTGATTTCTGCTCTAACTACACAGGGCTaGGATGGACACCTGCTCCAAGTTTGGCCAGTCATT +
Preference number: 3 (lower is better)
Translates to: VEILISALTTQG*DGHLLQVWPVI
Trigger: AATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAGTTAGAGCAGAAATCAAGATCTCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383226.4
3UTR-3UTR CAA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGCTGCCAGCCAGAGCTTaGGGTAGAGCAAGAATGTGT +
Preference number: 3 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLLPARA*GRARMC
Trigger: ACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCAG...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATTGTAATTCCAGTACTTaGGGAGGGAAGGTGGGTGGA +
Preference number: 3 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNCNSST*GGKVGG
Trigger: TCCACCCACCTTCCCTCCCAAAGTACTGGAATTACA...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTTTTGCCTCTATTTACTaGTACCTTGATTGGCTGATG +
Preference number: 3 (lower is better)
Translates to: REHRPCGSESVGGAALASFASIY*YLDWLM
Trigger: CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAA...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTGTTCAAACCCTCATTTaGCCTCTATTTACTTGTACC +
Preference number: 3 (lower is better)
Translates to: REHRPCGSESVGGAALASVQTLI*PLFTCT
Trigger: GGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAAC...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGTGTAATTCCAGTACTTaGGGAGGGAAGGTGGGTGGA +
Preference number: 3 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLCNSST*GGKVGG
Trigger: TCCACCCACCTTCCCTCCCAAAGTACTGGAATTACA...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCTCTTAAGAAGCCCATaGAGTCCCCATAATCTCTTG +
Preference number: 3 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFLLRSP*SPHNLL
Trigger: CAAGAGATTATGGGGACTCAATGGGCTTCTTAAGAG...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR CCA 72 bp GATCTTGATTCCTGCTCTAACTACACAGGGCTGGGATaGACACCTGCTCCAAGTTTGGCCAGTCATTTATTT +
Preference number: 3 (lower is better)
Translates to: DLDSCSNYTGLG*TPAPSLASHLF
Trigger: AAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAGTTAGAGCAGGAATCAAGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATCTCTTAAGAAGCCCATaGAGTCCCCATAATCTCTTG +
Preference number: 3 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNLLRSP*SPHNLL
Trigger: CAAGAGATTATGGGGACTCAATGGGCTTCTTAAGAG...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR-3UTR CAA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGGATGGTTTCCACCTCTaGGCCTCAAGCAGTTCTGTC +
Preference number: 3 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMDGFHL*ASSSSV
Trigger: GACAGAACTGCTTGAGGCCAAGAGGTGGAAACCATC...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426685.2
3UTR CCA 72 bp GATCTTGATTTCTGCTCTAACTACACAGGGCTGGGATaGACACCTGCTCCAAGTTTGGCCAGTCATTTATTT +
Preference number: 3 (lower is better)
Translates to: DLDFCSNYTGLG*TPAPSLASHLF
Trigger: AAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAGTTAGAGCAGAAATCAAGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383226.4
3UTR-3UTR CAA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGCACCTTATCCAAGCCTaGGGCCTCTCTTTATCATGC +
Preference number: 3 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMHLIQA*GLSLSC
Trigger: GCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGTG...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR TCA 72 bp CTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTaGTGCCCTAACAGACCCAGGTTCTTCAGAAAGCCT +
Preference number: 3 (lower is better)
Translates to: LILPLFTCTLIG*CPNRPRFFRKP
Trigger: AGGCTTTCTGAAGAACCTGGGTCTGTTAGGGCATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR TCA 72 bp TTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTaGTTGGCTGATGCCCTAACAGACCCAGGTTCTTCA +
Preference number: 3 (lower is better)
Translates to: FKPSFCLYLLVP*LADALTDPGSS
Trigger: TGAAGAACCTGGGTCTGTTAGGGCATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR CCA 72 bp CGTCTAAGCAAAAGATCAGCAGAGATCAGAGATTGTTaGGTACACACGTATCTTGTGATGTCTTCTGAGAAC +
Preference number: 3 (lower is better)
Translates to: RLSKRSAEIRDC*VHTYLVMSSEN
Trigger: GTTCTCAGAAGACATCACAAGATACGTGTGTACCCAACAATCTCTGATCTCTGCTGATCTTTTGCTTAGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
3UTR TCA 72 bp AGATTGTTGGGTACACACGTATCTTGTGATGTCTTCTaGGAACCAACTTATTCCTCTTTCTCTGAGAAGAAC +
Preference number: 3 (lower is better)
Translates to: RLLGTHVSCDVF*EPTYSSFSEKN
Trigger: GTTCTTCTCAGAGAAAGAGGAATAAGTTGGTTCTCAGAAGACATCACAAGATACGTGTGTACCCAACAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGTGTGGTCAGCCTTGGTaGCCCCTGCCTCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGCGQPW*PLPPAG
Trigger: GCCCGCAGGAGGCAGGGGCCACCAAGGCTGACCACA...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGCCATGTGGTCAGCCTTaGTGGCCCCTGCCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGPCGQP*WPLPPA
Trigger: CGCAGGAGGCAGGGGCCACCAAGGCTGACCACATGG...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGATAGACGTCCTCGGCTaGGGGCACGAAGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGIDVLG*GHEGQV
Trigger: TACCTGCCCTTCGTGCCCTCAGCCGAGGACGTCTAT...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAGTGGCCCCTGCCTCCTaGGGGCTCAGGAGGGTCATC +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSVAPAS*GLRRVI
Trigger: GATGACCCTCCTGAGCCCGCAGGAGGCAGGGGCCAC...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTGTGGCCCCTGCCTCCTaGGGGCTCAGGAGGGTCATC +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASVAPAS*GLRRVI
Trigger: GATGACCCTCCTGAGCCCGCAGGAGGCAGGGGCCAC...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACAGCCTTGGTGGCCCCTaGCTCCTGCGGGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDSLGGP*LLRAQE
Trigger: CTCCTGAGCCCGCAGGAGGCAGGGGCCACCAAGGCT...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAAGCCTTGGTGGCCCCTaGCTCCTGCGGGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSSLGGP*LLRAQE
Trigger: CTCCTGAGCCCGCAGGAGGCAGGGGCCACCAAGGCT...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTGGTCAGCCTTGGTaGCCCCTGCCTCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDCGQPW*PLPPAG
Trigger: GCCCGCAGGAGGCAGGGGCCACCAAGGCTGACCACA...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCATGTGGTCAGCCTTGGTaGCCCCTGCCTCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSCGQPW*PLPPAG
Trigger: GCCCGCAGGAGGCAGGGGCCACCAAGGCTGACCACA...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR CCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCATGTGGTCAGCCTTGGTaGCCCCTGCCTCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSCGQPW*PLPPAG
Trigger: GCCCGCAGGAGGCAGGGGCCACCAAGGCTGACCACA...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGCCATGTGGTCAGCCTTaGTGGCCCCTGCCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: EHRPCGSESVGGAALASLPCGQP*WPLPPA
Trigger: CGCAGGAGGCAGGGGCCACCAAGGCTGACCACATGG...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGGCTCCACCCGAGACTTaGGGAGCACGGTCACCCGTG +
Preference number: 4 (lower is better)
Translates to: EHRPCGSESVGGAALASLAPPET*GARSPV
Trigger: CACGGGTGACCGTGCTCCCCAAGTCTCGGGTGGAGC...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGGCAGTCCTGTCCCCTTaGCCTCCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGAVLSP*PPKVLG
Trigger: TCCCAGCACTTTGGGAGGCCAAGGGGACAGGACTGC...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCCCGTGGAGGCACGTTaGTGGCTCTGCTGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASPVEAR*WLCCGW
Trigger: CCAACCGCAGCAGAGCCATCAACGTGCCTCCACGGG...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTGGAGCTCCCAATGCCTaGGGAGTGGCGCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASGAPNA*GVAHPG
Trigger: GCCTGGATGCGCCACTCCTCAGGCATTGGGAGCTCC...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAGGAGCTCCCAATGCCTaGGGAGTGGCGCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSGAPNA*GVAHPG
Trigger: GCCTGGATGCGCCACTCCTCAGGCATTGGGAGCTCC...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTAGCCTTGGTGGCCCCTaGCTCCTGCGGGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSSLGGP*LLRAQE
Trigger: CTCCTGAGCCCGCAGGAGGCAGGGGCCACCAAGGCT...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTTGTGGTCAGCCTTGGTaGCCCCTGCCTCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSCGQPW*PLPPAG
Trigger: GCCCGCAGGAGGCAGGGGCCACCAAGGCTGACCACA...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCACCATGTGGTCAGCCTTaGTGGCCCCTGCCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSPCGQP*WPLPPA
Trigger: CGCAGGAGGCAGGGGCCACCAAGGCTGACCACATGG...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR CCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTGCTCCACCCGAGACTTaGGGAGCACGGTCACCCGTG +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASAPPET*GARSPV
Trigger: CACGGGTGACCGTGCTCCCCAAGTCTCGGGTGGAGC...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAGCTCCACCCGAGACTTaGGGAGCACGGTCACCCGTG +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSAPPET*GARSPV
Trigger: CACGGGTGACCGTGCTCCCCAAGTCTCGGGTGGAGC...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACGCTCCACCCGAGACTTaGGGAGCACGGTCACCCGTG +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDAPPET*GARSPV
Trigger: CACGGGTGACCGTGCTCCCCAAGTCTCGGGTGGAGC...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGGCTGGGAATAGAAGCTaGTCTGGGCCACTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGAGNRS*SGPLPQ
Trigger: CTGAGGGAGTGGCCCAGACCAGCTTCTATTCCCAGC...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCCCCGTGGAGGCACGTTaGTGGCTCTGCTGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIPVEAR*WLCCGW
Trigger: CCAACCGCAGCAGAGCCATCAACGTGCCTCCACGGG...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACCCCGTGGAGGCACGTTaGTGGCTCTGCTGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHPVEAR*WLCCGW
Trigger: CCAACCGCAGCAGAGCCATCAACGTGCCTCCACGGG...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACGGAGCTCCCAATGCCTaGGGAGTGGCGCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHGAPNA*GVAHPG
Trigger: GCCTGGATGCGCCACTCCTCAGGCATTGGGAGCTCC...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCGGAGCTCCCAATGCCTaGGGAGTGGCGCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIGAPNA*GVAHPG
Trigger: GCCTGGATGCGCCACTCCTCAGGCATTGGGAGCTCC...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTGGAGCTCCCAATGCCTaGGGAGTGGCGCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSGAPNA*GVAHPG
Trigger: GCCTGGATGCGCCACTCCTCAGGCATTGGGAGCTCC...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGGCACTTAAAGGGCACTaGGCACGCAGGGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: EHRPCGSESVGGAALASLALKGH*ARRGCH
Trigger: GTGACAGCCCCTGCGTGCTCAGTGCCCTTTAAGTGC...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCAGATGGGCTTTGATTaGGGCGATGCCGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASQMGFD*GDAGQP
Trigger: GGGCTGGCCGGCATCGCCGCAATCAAAGCCCATCTG...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACCAGATGGGCTTTGATTaGGGCGATGCCGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDQMGFD*GDAGQP
Trigger: GGGCTGGCCGGCATCGCCGCAATCAAAGCCCATCTG...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCACAGATGGGCTTTGATTaGGGCGATGCCGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSQMGFD*GDAGQP
Trigger: GGGCTGGCCGGCATCGCCGCAATCAAAGCCCATCTG...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR GCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGATCCCCAGCACCACATaGCTCACCCCTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGIPSTT*LTPGRT
Trigger: AGTTCTTCCAGGGGTGAGGCATGTGGTGCTGGGGAT...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACCAGCCTCCCTGTTGCTaGCCCCTGCACTCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDQPPCC*PLHSRD
Trigger: ATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTG...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR GCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGAGTGAGCTGAGATCATaGCATGGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGSELRS*HGTPAW
Trigger: CCAGGCTGGAGTGCCATGGCATGATCTCAGCTCACT...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACCGCCCCGGGGCTGAGTaGTTGGCAGCCACATTTGTG +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDRPGAE*LAATFV
Trigger: CACAAATGTGGCTGCCAAGCACTCAGCCCCGGGGCG...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCACGCCCCGGGGCTGAGTaGTTGGCAGCCACATTTGTG +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSRPGAE*LAATFV
Trigger: CACAAATGTGGCTGCCAAGCACTCAGCCCCGGGGCG...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGAGGGTCATCAGGGTGTaGAACCCCAGGACCAGCCCT +
Preference number: 4 (lower is better)
Translates to: EHRPCGSESVGGAALASLRVIRV*NPRTSP
Trigger: AGGGCTGGTCCTGGGGTTCCACACCCTGATGACCCT...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACCCATGTGGTCAGCCTTaGTGGCCCCTGCCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHPCGQP*WPLPPA
Trigger: CGCAGGAGGCAGGGGCCACCAAGGCTGACCACATGG...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCCCATGTGGTCAGCCTTaGTGGCCCCTGCCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIPCGQP*WPLPPA
Trigger: CGCAGGAGGCAGGGGCCACCAAGGCTGACCACATGG...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGGAGCACGGTCACCCGTaGAGGCACGTTGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: EHRPCGSESVGGAALASLEHGHP*RHVDGS
Trigger: AGAGCCATCAACGTGCCTCCACGGGTGACCGTGCTC...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGGCTCCACCCGAGACTTaGGGAGCACGGTCACCCGTG +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRAPPET*GARSPV
Trigger: CACGGGTGACCGTGCTCCCCAAGTCTCGGGTGGAGC...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCACCAATGCCTGAGGAGTaGCGCATCCAGGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSPMPEE*RIQAPV
Trigger: CACTGGGGCCTGGATGCGCCACTCCTCAGGCATTGG...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR CCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCACCAATGCCTGAGGAGTaGCGCATCCAGGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSPMPEE*RIQAPV
Trigger: CACTGGGGCCTGGATGCGCCACTCCTCAGGCATTGG...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGAATGACAGCCTCGGCTaGGCACAGTGGCTAATGCCT +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGNDSLG*AQWLMP
Trigger: AGGCATTAGCCACTGTGCCCAGCCGAGGCTGTCATT...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAATAGACGTCCTCGGCTaGGGGCACGAAGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSIDVLG*GHEGQV
Trigger: TACCTGCCCTTCGTGCCCTCAGCCGAGGACGTCTAT...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR TCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTATAGACGTCCTCGGCTaGGGGCACGAAGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASIDVLG*GHEGQV
Trigger: TACCTGCCCTTCGTGCCCTCAGCCGAGGACGTCTAT...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTGTGGCCCCTGCCTCCTaGGGGCTCAGGAGGGTCATC +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFVAPAS*GLRRVI
Trigger: GATGACCCTCCTGAGCCCGCAGGAGGCAGGGGCCAC...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCCAGATGGGCTTTGATTaGGGCGATGCCGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIQMGFD*GDAGQP
Trigger: GGGCTGGCCGGCATCGCCGCAATCAAAGCCCATCTG...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAACCTGGAGCTCCCAATaGCTGAGGAGTGGCGCATCC +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSTWSSQ*LRSGAS
Trigger: GGATGCGCCACTCCTCAGGCATTGGGAGCTCCAGGT...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTTCTGTCCCCTTGGCCTCCCAATCCCCAGCACCACATaGCTCACCCCTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: PRWFPPLGLKQFCPLGLPIPSTT*LTPGRT
Trigger: AGTTCTTCCAGGGGTGAGGCATGTGGTGCTGGGGAT...TGGGAGGCCAAGGGGACAGAACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000426685.2
CDS-3UTR GCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGACAGGAATGAGCCACTaGACCAGGCCAATGCCTGTA +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGTGMSH*TRPMPV
Trigger: TACAGGCATTGGCCTGGTGCAGTGGCTCATTCCTGT...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTTCTGTCCCCTTGGCCTCCCAAGTGAGCTGAGATCATaGCATGGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: PRWFPPLGLKQFCPLGLPSELRS*HGTPAW
Trigger: CCAGGCTGGAGTGCCATGGCATGATCTCAGCTCACT...TGGGAGGCCAAGGGGACAGAACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426685.2
CDS-3UTR GCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGTCTACCCTTGGGCCCTaGACTCCTCCCCATGGCTAT +
Preference number: 4 (lower is better)
Translates to: EHRPCGSESVGGAALASLSTLGP*TPPHGY
Trigger: ATAGCCATGGGGAGGAGTGCAGGGCCCAAGGGTAGA...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCATGGCTCTGCTGCGGTTaGAGCGCTCCACCAGGATGT +
Preference number: 4 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSWLCCG*SAPPGC
Trigger: ACATCCTGGTGGAGCGCTCCAACCGCAGCAGAGCCA...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR CCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTTGGCTCTGCTGCGGTTaGAGCGCTCCACCAGGATGT +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASWLCCG*SAPPGC
Trigger: ACATCCTGGTGGAGCGCTCCAACCGCAGCAGAGCCA...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACGAGCACGGTCACCCGTaGAGGCACGTTGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDEHGHP*RHVDGS
Trigger: AGAGCCATCAACGTGCCTCCACGGGTGACCGTGCTC...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTCCAATGCCTGAGGAGTaGCGCATCCAGGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSPMPEE*RIQAPV
Trigger: CACTGGGGCCTGGATGCGCCACTCCTCAGGCATTGG...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGGGTGGAATAGGCACCTaGAGCTCCCAATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: EHRPCGSESVGGAALASLGGIGT*SSQCLR
Trigger: CCTCAGGCATTGGGAGCTCCAGGTGCCTATTCCACC...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGTGTTCCTGGGAGGCCTaGCTAAAATCTACCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGCSWEA*LKSTLG
Trigger: CCCAAGGGTAGATTTTAGCCAGGCCTCCCAGGAACA...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGTCCAGATGGGCTTTaGTTGCGGCGATGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIICPDGL*LRRCRP
Trigger: TGGCCGGCATCGCCGCAATCAAAGCCCATCTGGACA...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACTGTCCAGATGGGCTTTaGTTGCGGCGATGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHCPDGL*LRRCRP
Trigger: TGGCCGGCATCGCCGCAATCAAAGCCCATCTGGACA...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCCCGTGGAGGCACGTTaGTGGCTCTGCTGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFPVEAR*WLCCGW
Trigger: CCAACCGCAGCAGAGCCATCAACGTGCCTCCACGGG...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCCGTGGAGGCACGTTaGTGGCTCTGCTGCGGTTGG +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFPVEAR*WLCCGW
Trigger: CCAACCGCAGCAGAGCCATCAACGTGCCTCCACGGG...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGATAGACGTCCTCGGCTaGGGGCACGAAGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRIDVLG*GHEGQV
Trigger: TACCTGCCCTTCGTGCCCTCAGCCGAGGACGTCTAT...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGAGGTGGAGGTTGCAGTaGGCTGAGATCATGCCATGG +
Preference number: 4 (lower is better)
Translates to: EHRPCGSESVGGAALASLRWRLQ*AEIMPW
Trigger: CCATGGCATGATCTCAGCTCACTGCAACCTCCACCT...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCATCTCAGTCCGTGTGGTaGGGACAGGAACAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSSQSVW*GQEQGG
Trigger: TCCGCCTTGTTCCTGTCCTCACCACACGGACTGAGA...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATAGCCTTGGTGGCCCCTaGCTCCTGCGGGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNSLGGP*LLRAQE
Trigger: CTCCTGAGCCCGCAGGAGGCAGGGGCCACCAAGGCT...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGACCTGGAGCTCCCAATaGCTGAGGAGTGGCGCATCC +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRTWSSQ*LRSGAS
Trigger: GGATGCGCCACTCCTCAGGCATTGGGAGCTCCAGGT...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACACCTGGAGCTCCCAATaGCTGAGGAGTGGCGCATCC +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHTWSSQ*LRSGAS
Trigger: GGATGCGCCACTCCTCAGGCATTGGGAGCTCCAGGT...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGGTGTCCAACAAACCCTaGCATGAATACTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGVSNKP*HEYWGQ
Trigger: TTGGCCCCAGTATTCATGGCAGGGTTTGTTGGACAC...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCATCTACCCTTGGGCCCTaGACTCCTCCCCATGGCTAT +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSSTLGP*TPPHGY
Trigger: ATAGCCATGGGGAGGAGTGCAGGGCCCAAGGGTAGA...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTCTACCCTTGGGCCCTaGACTCCTCCCCATGGCTAT +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDSTLGP*TPPHGY
Trigger: ATAGCCATGGGGAGGAGTGCAGGGCCCAAGGGTAGA...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGAGGGTCATCAGGGTGTaGAACCCCAGGACCAGCCCT +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRRVIRV*NPRTSP
Trigger: AGGGCTGGTCCTGGGGTTCCACACCCTGATGACCCT...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCAGGGTCATCAGGGTGTaGAACCCCAGGACCAGCCCT +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIRVIRV*NPRTSP
Trigger: AGGGCTGGTCCTGGGGTTCCACACCCTGATGACCCT...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCCATGTGGTCAGCCTTaGTGGCCCCTGCCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFPCGQP*WPLPPA
Trigger: CGCAGGAGGCAGGGGCCACCAAGGCTGACCACATGG...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTGAGCACGGTCACCCGTaGAGGCACGTTGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSEHGHP*RHVDGS
Trigger: AGAGCCATCAACGTGCCTCCACGGGTGACCGTGCTC...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAGCTGGGAATAGAAGCTaGTCTGGGCCACTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSAGNRS*SGPLPQ
Trigger: CTGAGGGAGTGGCCCAGACCAGCTTCTATTCCCAGC...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGCTGGGAATAGAAGCTaGTCTGGGCCACTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSAGNRS*SGPLPQ
Trigger: CTGAGGGAGTGGCCCAGACCAGCTTCTATTCCCAGC...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR CCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAGGTGGAATAGGCACCTaGAGCTCCCAATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSGGIGT*SSQCLR
Trigger: CCTCAGGCATTGGGAGCTCCAGGTGCCTATTCCACC...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGCATGGCATCTGGTGGTaGAATAGGCACCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: EHRPCGSESVGGAALASLHGIWW*NRHLEL
Trigger: GAGCTCCAGGTGCCTATTCCACCACCAGATGCCATG...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAAAACCCAGGCAGGAGTaGAGTCCCCATGAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSKPRQE*SPHEPV
Trigger: GACAGGCTCATGGGGACTCCACTCCTGCCTGGGTTT...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGAATGACAGCCTCGGCTaGGCACAGTGGCTAATGCCT +
Preference number: 4 (lower is better)
Translates to: EHRPCGSESVGGAALASLNDSLG*AQWLMP
Trigger: AGGCATTAGCCACTGTGCCCAGCCGAGGCTGTCATT...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGTCCGAGTTCTGTTCCTaGGAGGCCTGGCTAAAATCT +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGSEFCS*EAWLKS
Trigger: AGATTTTAGCCAGGCCTCCCAGGAACAGAACTCGGA...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAGCTGTCACAAACCCATaGGGATCTGCAGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSAVTNP*GSAGCL
Trigger: GAGACACCCTGCAGATCCTCATGGGTTTGTGACAGC...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTTCTCAGTCCGTGTGGTaGGGACAGGAACAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSSQSVW*GQEQGG
Trigger: TCCGCCTTGTTCCTGTCCTCACCACACGGACTGAGA...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGTCTCAGTCCGTGTGGTaGGGACAGGAACAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRSQSVW*GQEQGG
Trigger: TCCGCCTTGTTCCTGTCCTCACCACACGGACTGAGA...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGGTGGCCCCTGCCTCCTaGGGGCTCAGGAGGGTCATC +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLVAPAS*GLRRVI
Trigger: GATGACCCTCCTGAGCCCGCAGGAGGCAGGGGCCAC...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGAGCCTTGGTGGCCCCTaGCTCCTGCGGGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLSLGGP*LLRAQE
Trigger: CTCCTGAGCCCGCAGGAGGCAGGGGCCACCAAGGCT...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCAGATGGGCTTTGATTaGGGCGATGCCGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFQMGFD*GDAGQP
Trigger: GGGCTGGCCGGCATCGCCGCAATCAAAGCCCATCTG...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGATGGGCTTTGATTaGGGCGATGCCGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFQMGFD*GDAGQP
Trigger: GGGCTGGCCGGCATCGCCGCAATCAAAGCCCATCTG...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACATCCCCAGCACCACATaGCTCACCCCTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDIPSTT*LTPGRT
Trigger: AGTTCTTCCAGGGGTGAGGCATGTGGTGCTGGGGAT...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACGCAATCTTGGCTCACTaGAGCCTTGAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDAILAH*SLELLG
Trigger: GCCCAGGAGTTCAAGGCTGCAGTGAGCCAAGATTGC...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCAGCCTCCCTGTTGCTaGCCCCTGCACTCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFQPPCC*PLHSRD
Trigger: ATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTG...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR GCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAAGTGAGCTGAGATCATaGCATGGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSSELRS*HGTPAW
Trigger: CCAGGCTGGAGTGCCATGGCATGATCTCAGCTCACT...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACAGTGAGCTGAGATCATaGCATGGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDSELRS*HGTPAW
Trigger: CCAGGCTGGAGTGCCATGGCATGATCTCAGCTCACT...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACTCTACCCTTGGGCCCTaGACTCCTCCCCATGGCTAT +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHSTLGP*TPPHGY
Trigger: ATAGCCATGGGGAGGAGTGCAGGGCCCAAGGGTAGA...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTCCATGTGGTCAGCCTTaGTGGCCCCTGCCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFPCGQP*WPLPPA
Trigger: CGCAGGAGGCAGGGGCCACCAAGGCTGACCACATGG...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACGCTGGGAATAGAAGCTaGTCTGGGCCACTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHAGNRS*SGPLPQ
Trigger: CTGAGGGAGTGGCCCAGACCAGCTTCTATTCCCAGC...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGGCTGGGAATAGAAGCTaGTCTGGGCCACTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRAGNRS*SGPLPQ
Trigger: CTGAGGGAGTGGCCCAGACCAGCTTCTATTCCCAGC...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCGGTGGAATAGGCACCTaGAGCTCCCAATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIGGIGT*SSQCLR
Trigger: CCTCAGGCATTGGGAGCTCCAGGTGCCTATTCCACC...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGGGTGGAATAGGCACCTaGAGCTCCCAATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRGGIGT*SSQCLR
Trigger: CCTCAGGCATTGGGAGCTCCAGGTGCCTATTCCACC...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCATGGCATCTGGTGGTaGAATAGGCACCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASHGIWW*NRHLEL
Trigger: GAGCTCCAGGTGCCTATTCCACCACCAGATGCCATG...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGAAACCCAGGCAGGAGTaGAGTCCCCATGAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRKPRQE*SPHEPV
Trigger: GACAGGCTCATGGGGACTCCACTCCTGCCTGGGTTT...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTAAACCCAGGCAGGAGTaGAGTCCCCATGAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSKPRQE*SPHEPV
Trigger: GACAGGCTCATGGGGACTCCACTCCTGCCTGGGTTT...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGAAGGAGATAACATCATaGCAGGATACCAGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGKEITS*QDTSGL
Trigger: GAGGCCACTGGTATCCTGCCATGATGTTATCTCCTT...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACGCTGAGATCATGCCATaGCACTCCAGCCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDAEIMP*HSSLVT
Trigger: TGTCACCAGGCTGGAGTGCCATGGCATGATCTCAGC...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACCACGAGGTCAAGAGATaGAGGCCATCCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDHEVKR*RPSWPT
Trigger: TGTTGGCCAGGATGGCCTCCATCTCTTGACCTCGTG...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAGGGAGGGAAGGTGGGTaGATCACGAGGTCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSGREGG*ITRSRD
Trigger: ATCTCTTGACCTCGTGATCCACCCACCTTCCCTCCC...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACGGGAGGGAAGGTGGGTaGATCACGAGGTCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDGREGG*ITRSRD
Trigger: ATCTCTTGACCTCGTGATCCACCCACCTTCCCTCCC...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCACTTTGGGAGGGAAGGTaGGTGGATCACGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSLWEGR*VDHEVK
Trigger: CTTGACCTCGTGATCCACCCACCTTCCCTCCCAAAG...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGGTAATTCCAGTACTTTaGGAGGGAAGGTGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGVIPVL*EGRWVD
Trigger: ATCCACCCACCTTCCCTCCCAAAGTACTGGAATTAC...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACAATGACAGCCTCGGCTaGGCACAGTGGCTAATGCCT +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDNDSLG*AQWLMP
Trigger: AGGCATTAGCCACTGTGCCCAGCCGAGGCTGTCATT...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAAATGACAGCCTCGGCTaGGCACAGTGGCTAATGCCT +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSNDSLG*AQWLMP
Trigger: AGGCATTAGCCACTGTGCCCAGCCGAGGCTGTCATT...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAGCTAAAATCTACCCTTaGGCCCTGCACTCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSAKIYP*ALHSSP
Trigger: TGGGGAGGAGTGCAGGGCCCAAGGGTAGATTTTAGC...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTTGGATCCGAGAGTGTTaGAGGGGCAGCTCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASWIREC*RGSSSF
Trigger: GAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCA...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGGATCCGAGAGTGTTaGAGGGGCAGCTCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDWIREC*RGSSSF
Trigger: GAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCA...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTGCTGTCACAAACCCATaGGGATCTGCAGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSAVTNP*GSAGCL
Trigger: GAGACACCCTGCAGATCCTCATGGGTTTGTGACAGC...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCGCACTTAAAGGGCACTaGGCACGCAGGGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFALKGH*ARRGCH
Trigger: GTGACAGCCCCTGCGTGCTCAGTGCCCTTTAAGTGC...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCAGGTGGAGGTTGCAGTaGGCTGAGATCATGCCATGG +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIRWRLQ*AEIMPW
Trigger: CCATGGCATGATCTCAGCTCACTGCAACCTCCACCT...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACAGGTGGAGGTTGCAGTaGGCTGAGATCATGCCATGG +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHRWRLQ*AEIMPW
Trigger: CCATGGCATGATCTCAGCTCACTGCAACCTCCACCT...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCATGTACCTTGATTGGCTaGTGCCCTAACAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSCTLIG*CPNRPR
Trigger: CCTGGGTCTGTTAGGGCATCAGCCAATCAAGGTACA...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACGGTGGACATGTTCACTaGGAAGGACAGTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDGGHVH*EGQSVH
Trigger: GTGGACTGACTGTCCTTCTCAGTGAACATGTCCACC...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAGGTGGACATGTTCACTaGGAAGGACAGTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSGGHVH*EGQSVH
Trigger: GTGGACTGACTGTCCTTCTCAGTGAACATGTCCACC...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGGCCTTAGGACAGAGATaGGAGAAACACCTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGALGQR*EKHLSN
Trigger: ATTGGAAAGGTGTTTCTCTCATCTCTGTCCTAAGGC...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATCAGATGGGCTTTGATTaGGGCGATGCCGGCCAGCCC +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNQMGFD*GDAGQP
Trigger: GGGCTGGCCGGCATCGCCGCAATCAAAGCCCATCTG...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGGTGTCCAACAAACCCTaGCATGAATACTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: EHRPCGSESVGGAALASLVSNKP*HEYWGQ
Trigger: TTGGCCCCAGTATTCATGGCAGGGTTTGTTGGACAC...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACATCCCCAGCACCACATaGCTCACCCCTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHIPSTT*LTPGRT
Trigger: AGTTCTTCCAGGGGTGAGGCATGTGGTGCTGGGGAT...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGGCAATCTTGGCTCACTaGAGCCTTGAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRAILAH*SLELLG
Trigger: GCCCAGGAGTTCAAGGCTGCAGTGAGCCAAGATTGC...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTGCAATCTTGGCTCACTaGAGCCTTGAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSAILAH*SLELLG
Trigger: GCCCAGGAGTTCAAGGCTGCAGTGAGCCAAGATTGC...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGTTTTCCAGGACCAACTaGTCACAGTTCAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGFSRTN*SQFKPS
Trigger: TGAGGGTTTGAACTGTGAGCAGTTGGTCCTGGAAAA...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATCGCCCCGGGGCTGAGTaGTTGGCAGCCACATTTGTG +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNRPGAE*LAATFV
Trigger: CACAAATGTGGCTGCCAAGCACTCAGCCCCGGGGCG...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAACCAGGATGTCCAGATaGGCTTTGATTGCGGCGATG +
Preference number: 4 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSTRMSR*ALIAAM
Trigger: CATCGCCGCAATCAAAGCCCATCTGGACATCCTGGT...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR CCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTACCAGGATGTCCAGATaGGCTTTGATTGCGGCGATG +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASTRMSR*ALIAAM
Trigger: CATCGCCGCAATCAAAGCCCATCTGGACATCCTGGT...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCTGGCTCTGCTGCGGTTaGAGCGCTCCACCAGGATGT +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFWLCCG*SAPPGC
Trigger: ACATCCTGGTGGAGCGCTCCAACCGCAGCAGAGCCA...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTTGGCTCTGCTGCGGTTaGAGCGCTCCACCAGGATGT +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFWLCCG*SAPPGC
Trigger: ACATCCTGGTGGAGCGCTCCAACCGCAGCAGAGCCA...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCGAGCACGGTCACCCGTaGAGGCACGTTGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFEHGHP*RHVDGS
Trigger: AGAGCCATCAACGTGCCTCCACGGGTGACCGTGCTC...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTGAGCACGGTCACCCGTaGAGGCACGTTGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFEHGHP*RHVDGS
Trigger: AGAGCCATCAACGTGCCTCCACGGGTGACCGTGCTC...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGGCTCCACCCGAGACTTaGGGAGCACGGTCACCCGTG +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLAPPET*GARSPV
Trigger: CACGGGTGACCGTGCTCCCCAAGTCTCGGGTGGAGC...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATCCAATGCCTGAGGAGTaGCGCATCCAGGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNPMPEE*RIQAPV
Trigger: CACTGGGGCCTGGATGCGCCACTCCTCAGGCATTGG...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACCATGGCATCTGGTGGTaGAATAGGCACCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHHGIWW*NRHLEL
Trigger: GAGCTCCAGGTGCCTATTCCACCACCAGATGCCATG...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTCATGGCATCTGGTGGTaGAATAGGCACCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSHGIWW*NRHLEL
Trigger: GAGCTCCAGGTGCCTATTCCACCACCAGATGCCATG...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGCTCCATGGCATCTGGTaGTGGAATAGGCACCTGGAG +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRLHGIW*WNRHLE
Trigger: CTCCAGGTGCCTATTCCACCACCAGATGCCATGGAG...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGACCTTATCCAAGCCTTaGGCCTCTCTTTATCATGCA +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGTLSKP*ASLYHA
Trigger: TGCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGT...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAATGGTTTCCACCTCTTaGCCTCAAGCAGTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSMVSTS*PQAVLS
Trigger: GGACAGGACTGCTTGAGGCCAAGAGGTGGAAACCAT...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR CCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTGCTGAGATCATGCCATaGCACTCCAGCCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSAEIMP*HSSLVT
Trigger: TGTCACCAGGCTGGAGTGCCATGGCATGATCTCAGC...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGCACGAGGTCAAGAGATaGAGGCCATCCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRHEVKR*RPSWPT
Trigger: TGTTGGCCAGGATGGCCTCCATCTCTTGACCTCGTG...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACCACGAGGTCAAGAGATaGAGGCCATCCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHHEVKR*RPSWPT
Trigger: TGTTGGCCAGGATGGCCTCCATCTCTTGACCTCGTG...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGCTTTGGGAGGGAAGGTaGGTGGATCACGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRLWEGR*VDHEVK
Trigger: CTTGACCTCGTGATCCACCCACCTTCCCTCCCAAAG...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCAATGACAGCCTCGGCTaGGCACAGTGGCTAATGCCT +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIINDSLG*AQWLMP
Trigger: AGGCATTAGCCACTGTGCCCAGCCGAGGCTGTCATT...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGCTGCACTCCTCCCCATaGCTATATTGCAAATATCCT +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGLHSSP*LYCKYP
Trigger: AGGATATTTGCAATATAGCCATGGGGAGGAGTGCAG...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCGCTAAAATCTACCCTTaGGCCCTGCACTCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIAKIYP*ALHSSP
Trigger: TGGGGAGGAGTGCAGGGCCCAAGGGTAGATTTTAGC...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACGCTAAAATCTACCCTTaGGCCCTGCACTCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHAKIYP*ALHSSP
Trigger: TGGGGAGGAGTGCAGGGCCCAAGGGTAGATTTTAGC...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGTCCGAGTTCTGTTCCTaGGAGGCCTGGCTAAAATCT +
Preference number: 4 (lower is better)
Translates to: EHRPCGSESVGGAALASLSEFCS*EAWLKS
Trigger: AGATTTTAGCCAGGCCTCCCAGGAACAGAACTCGGA...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGGATCCGAGAGTGTTaGAGGGGCAGCTCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIWIREC*RGSSSF
Trigger: GAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCA...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATTGTCCAGATGGGCTTTaGTTGCGGCGATGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNCPDGL*LRRCRP
Trigger: TGGCCGGCATCGCCGCAATCAAAGCCCATCTGGACA...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATGCACTTAAAGGGCACTaGGCACGCAGGGGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNALKGH*ARRGCH
Trigger: GTGACAGCCCCTGCGTGCTCAGTGCCCTTTAAGTGC...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAACCTCCTACCTAACATaGCTGACTCCACTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSTSYLT*LTPLRE
Trigger: TTCCCTCAGTGGAGTCAGTCATGTTAGGTAGGAGGT...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGTACCTTGATTGGCTaGTGCCCTAACAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIICTLIG*CPNRPR
Trigger: CCTGGGTCTGTTAGGGCATCAGCCAATCAAGGTACA...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGCCTATACTTTGCATGTaGTCACACAAAGAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGPILCM*SHKEGF
Trigger: GAAACCCTCTTTGTGTGATCACATGCAAAGTATAGG...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGGGTGGACATGTTCACTaGGAAGGACAGTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRGGHVH*EGQSVH
Trigger: GTGGACTGACTGTCCTTCTCAGTGAACATGTCCACC...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTTCTCAGTCCGTGTGGTaGGGACAGGAACAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFSQSVW*GQEQGG
Trigger: TCCGCCTTGTTCCTGTCCTCACCACACGGACTGAGA...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCTCTCAGTCCGTGTGGTaGGGACAGGAACAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFSQSVW*GQEQGG
Trigger: TCCGCCTTGTTCCTGTCCTCACCACACGGACTGAGA...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGGTGGCCCCTGCCTCCTaGGGGCTCAGGAGGGTCATC +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMVAPAS*GLRRVI
Trigger: GATGACCCTCCTGAGCCCGCAGGAGGCAGGGGCCAC...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGAGCCTTGGTGGCCCCTaGCTCCTGCGGGCTCAGGAG +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMSLGGP*LLRAQE
Trigger: CTCCTGAGCCCGCAGGAGGCAGGGGCCACCAAGGCT...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAGCAGGTAGTGGAACTTaGGGAACAAATGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSAGSGT*GTNGQA
Trigger: AGCCTGACCATTTGTTCCGCAAGTTCCACTACCTGC...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTGCAGGTAGTGGAACTTaGGGAACAAATGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASAGSGT*GTNGQA
Trigger: AGCCTGACCATTTGTTCCGCAAGTTCCACTACCTGC...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTACCTGGAGCTCCCAATaGCTGAGGAGTGGCGCATCC +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFTWSSQ*LRSGAS
Trigger: GGATGCGCCACTCCTCAGGCATTGGGAGCTCCAGGT...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTGTCCAACAAACCCTaGCATGAATACTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSVSNKP*HEYWGQ
Trigger: TTGGCCCCAGTATTCATGGCAGGGTTTGTTGGACAC...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR GCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGAGGAACAGGATAATCTaGATCCCTTTCAGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGRNRII*IPFRVN
Trigger: GTTTACCCTGAAAGGGATGCAGATTATCCTGTTCCT...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTACAGGAATGAGCCACTaGACCAGGCCAATGCCTGTA +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSTGMSH*TRPMPV
Trigger: TACAGGCATTGGCCTGGTGCAGTGGCTCATTCCTGT...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCAAGGTCCAGGATGGCTaGATCAGAGTCATCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIKVQDG*IRVIQS
Trigger: GCTCTGGATGACTCTGATGCAGCCATCCTGGACCTT...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTAAGGTCCAGGATGGCTaGATCAGAGTCATCCAGAGC +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSKVQDG*IRVIQS
Trigger: GCTCTGGATGACTCTGATGCAGCCATCCTGGACCTT...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATAGGGTCATCAGGGTGTaGAACCCCAGGACCAGCCCT +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNRVIRV*NPRTSP
Trigger: AGGGCTGGTCCTGGGGTTCCACACCCTGATGACCCT...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTAGGGTCATCAGGGTGTaGAACCCCAGGACCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFRVIRV*NPRTSP
Trigger: AGGGCTGGTCCTGGGGTTCCACACCCTGATGACCCT...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGTGTGGTCAGCCTTGGTaGCCCCTGCCTCCTGCGGGC +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMCGQPW*PLPPAG
Trigger: GCCCGCAGGAGGCAGGGGCCACCAAGGCTGACCACA...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGACCAGGATGTCCAGATaGGCTTTGATTGCGGCGATG +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRTRMSR*ALIAAM
Trigger: CATCGCCGCAATCAAAGCCCATCTGGACATCCTGGT...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTACCAGGATGTCCAGATaGGCTTTGATTGCGGCGATG +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSTRMSR*ALIAAM
Trigger: CATCGCCGCAATCAAAGCCCATCTGGACATCCTGGT...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCGGTGGAATAGGCACCTaGAGCTCCCAATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFGGIGT*SSQCLR
Trigger: CCTCAGGCATTGGGAGCTCCAGGTGCCTATTCCACC...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCATGCCAGCCAGAGCTTTaGGTAGAGCAAGAATGTGTG +
Preference number: 4 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSCQPEL*VEQECV
Trigger: CACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCA...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGCCAGCCAGAGCTTTaGGTAGAGCAAGAATGTGTG +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDCQPEL*VEQECV
Trigger: CACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCA...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCATGCCAGCCAGAGCTTTaGGTAGAGCAAGAATGTGTG +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSCQPEL*VEQECV
Trigger: CACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCA...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGACACAATGGGCCAAATaGAGCAAGACACACCTGTGT +
Preference number: 4 (lower is better)
Translates to: EHRPCGSESVGGAALASLTQWAK*SKTHLC
Trigger: ACACAGGTGTGTCTTGCTCCATTTGGCCCATTGTGT...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGCAAAGTAACACACAATaGGCCAAATGGAGCAAGACA +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGQSNTQ*AKWSKT
Trigger: TGTCTTGCTCCATTTGGCCCATTGTGTGTTACTTTG...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGATGGTTTCCACCTCTTaGCCTCAAGCAGTCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRMVSTS*PQAVLS
Trigger: GGACAGGACTGCTTGAGGCCAAGAGGTGGAAACCAT...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACTGTTCCTGGGAGGCCTaGCTAAAATCTACCCTTGGG +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHCSWEA*LKSTLG
Trigger: CCCAAGGGTAGATTTTAGCCAGGCCTCCCAGGAACA...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTCCGAGTTCTGTTCCTaGGAGGCCTGGCTAAAATCT +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDSEFCS*EAWLKS
Trigger: AGATTTTAGCCAGGCCTCCCAGGAACAGAACTCGGA...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAAGAACACAGACCATGTaGATCCGAGAGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSRTQTM*IRECWR
Trigger: CCTCCAACACTCTCGGATCCACATGGTCTGTGTTCT...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR CCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTAGAACACAGACCATGTaGATCCGAGAGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASRTQTM*IRECWR
Trigger: CCTCCAACACTCTCGGATCCACATGGTCTGTGTTCT...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTGCAGTTCTGTCCCCTTaGCCTCCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFAVLSP*PPKVLG
Trigger: TCCCAGCACTTTGGGAGGCCAAGGGGACAGAACTGC...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426685.2
CDS-3UTR TCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGTTCATGAAGTCCATGTaGAATGGCTCATTCACAAAG +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGFMKSM*NGSFTK
Trigger: CTTTGTGAATGAGCCATTTCACATGGACTTCATGAA...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACACCTCCTACCTAACATaGCTGACTCCACTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHTSYLT*LTPLRE
Trigger: TTCCCTCAGTGGAGTCAGTCATGTTAGGTAGGAGGT...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGACCTCCTACCTAACATaGCTGACTCCACTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRTSYLT*LTPLRE
Trigger: TTCCCTCAGTGGAGTCAGTCATGTTAGGTAGGAGGT...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGGAAACACCTTTCCAATaGTGCATCAAGTTAACGTCT +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGETPFQ*CIKLTS
Trigger: AGACGTTAACTTGATGCATCATTGGAAAGGTGTTTC...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCAGCCTGGTGACAGAGTaGGACTCCTTCTCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIISLVTE*DSFSEK
Trigger: CTTTTCTGAGAAGGAGTCTCACTCTGTCACCAGGCT...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434335.2
CDS-3UTR GCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTGTGTCCAACAAACCCTaGCATGAATACTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSVSNKP*HEYWGQ
Trigger: TTGGCCCCAGTATTCATGGCAGGGTTTGTTGGACAC...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACGTGTCCAACAAACCCTaGCATGAATACTGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHVSNKP*HEYWGQ
Trigger: TTGGCCCCAGTATTCATGGCAGGGTTTGTTGGACAC...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCAGTGAGCTGAGATCATaGCATGGCACTCCAGCCTGG +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFSELRS*HGTPAW
Trigger: CCAGGCTGGAGTGCCATGGCATGATCTCAGCTCACT...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATTCTACCCTTGGGCCCTaGACTCCTCCCCATGGCTAT +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNSTLGP*TPPHGY
Trigger: ATAGCCATGGGGAGGAGTGCAGGGCCCAAGGGTAGA...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGTGGCTCTGCTGCGGTTaGAGCGCTCCACCAGGATGT +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLWLCCG*SAPPGC
Trigger: ACATCCTGGTGGAGCGCTCCAACCGCAGCAGAGCCA...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGGAGCACGGTCACCCGTaGAGGCACGTTGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLEHGHP*RHVDGS
Trigger: AGAGCCATCAACGTGCCTCCACGGGTGACCGTGCTC...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTGCTGGGAATAGAAGCTaGTCTGGGCCACTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFAGNRS*SGPLPQ
Trigger: CTGAGGGAGTGGCCCAGACCAGCTTCTATTCCCAGC...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCATGGCATCTGGTGGTaGAATAGGCACCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFHGIWW*NRHLEL
Trigger: GAGCTCCAGGTGCCTATTCCACCACCAGATGCCATG...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCTCCATGGCATCTGGTaGTGGAATAGGCACCTGGAG +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFLHGIW*WNRHLE
Trigger: CTCCAGGTGCCTATTCCACCACCAGATGCCATGGAG...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACTGCCAGCCAGAGCTTTaGGTAGAGCAAGAATGTGTG +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHCQPEL*VEQECV
Trigger: CACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCA...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTAAACCCAGGCAGGAGTaGAGTCCCCATGAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFKPRQE*SPHEPV
Trigger: GACAGGCTCATGGGGACTCCACTCCTGCCTGGGTTT...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGGCAGTCCTGTCCCCTTaGCCTCCCAAAGTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLAVLSP*PPKVLG
Trigger: TCCCAGCACTTTGGGAGGCCAAGGGGACAGGACTGC...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTGCTGAGATCATGCCATaGCACTCCAGCCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFAEIMP*HSSLVT
Trigger: TGTCACCAGGCTGGAGTGCCATGGCATGATCTCAGC...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCACGAGGTCAAGAGATaGAGGCCATCCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFHEVKR*RPSWPT
Trigger: TGTTGGCCAGGATGGCCTCCATCTCTTGACCTCGTG...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCGGGAGGGAAGGTGGGTaGATCACGAGGTCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFGREGG*ITRSRD
Trigger: ATCTCTTGACCTCGTGATCCACCCACCTTCCCTCCC...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCTTTGGGAGGGAAGGTaGGTGGATCACGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFLWEGR*VDHEVK
Trigger: CTTGACCTCGTGATCCACCCACCTTCCCTCCCAAAG...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTGTAATTCCAGTACTTTaGGAGGGAAGGTGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASVIPVL*EGRWVD
Trigger: ATCCACCCACCTTCCCTCCCAAAGTACTGGAATTAC...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTGCTAAAATCTACCCTTaGGCCCTGCACTCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFAKIYP*ALHSSP
Trigger: TGGGGAGGAGTGCAGGGCCCAAGGGTAGATTTTAGC...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTTGGATCCGAGAGTGTTaGAGGGGCAGCTCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFWIREC*RGSSSF
Trigger: GAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCA...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTAGAACACAGACCATGTaGATCCGAGAGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSRTQTM*IRECWR
Trigger: CCTCCAACACTCTCGGATCCACATGGTCTGTGTTCT...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGGCGAGCCACCATGGCTaGTTAATTTTTAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGASHHG*LIFKSF
Trigger: GAAAGATTTAAAAATTAACCAGCCATGGTGGCTCGC...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000383226.4
ENST00000426685.2
ENST00000434335.2
CDS-3UTR CCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGATGGTTTCCACCTCTTaGCCTCAAGCAGTTCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRMVSTS*PQAVLS
Trigger: GGACAGAACTGCTTGAGGCCAAGAGGTGGAAACCAT...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426685.2
CDS-3UTR TCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATGGAGCTCCCAATGCCTaGGGAGTGGCGCATCCAGGC +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHGAPNA*GVAHPG
Trigger: GCCTGGATGCGCCACTCCTCAGGCATTGGGAGCTCC...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGAGTAATTTAAAGCTGTaGCTAGGAGACACAGCCTCT +
Preference number: 4 (lower is better)
Translates to: EHRPCGSESVGGAALASLSNLKL*LGDTAS
Trigger: AGAGGCTGTGTCTCCTAGTCACAGCTTTAAATTACT...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTTTATTCCTCTTTCTCTaGGAAGAACTTGACCCCTCG +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASLFLFL*EELDPS
Trigger: CGAGGGGTCAAGTTCTTCTCAGAGAAAGAGGAATAA...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTGCCTTAGGACAGAGATaGGAGAAACACCTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASALGQR*EKHLSN
Trigger: ATTGGAAAGGTGTTTCTCTCATCTCTGTCCTAAGGC...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAGCCTTAGGACAGAGATaGGAGAAACACCTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSALGQR*EKHLSN
Trigger: ATTGGAAAGGTGTTTCTCTCATCTCTGTCCTAAGGC...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATGCAATCTTGGCTCACTaGAGCCTTGAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNAILAH*SLELLG
Trigger: GCCCAGGAGTTCAAGGCTGCAGTGAGCCAAGATTGC...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGCAGCCTCCCTGTTGCTaGCCCCTGCACTCCCGAGAT +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMQPPCC*PLHSRD
Trigger: ATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTG...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR GCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTAAGGTCCAGGATGGCTaGATCAGAGTCATCCAGAGC +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFKVQDG*IRVIQS
Trigger: GCTCTGGATGACTCTGATGCAGCCATCCTGGACCTT...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCATTTTCCAGGACCAACTaGTCACAGTTCAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSFSRTN*SQFKPS
Trigger: TGAGGGTTTGAACTGTGAGCAGTTGGTCCTGGAAAA...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR GCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCATTTTCCAGGACCAACTaGTCACAGTTCAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSFSRTN*SQFKPS
Trigger: TGAGGGTTTGAACTGTGAGCAGTTGGTCCTGGAAAA...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGTCCCCATGGCTATATTaGAAATATCCTATACTTTGC +
Preference number: 4 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGSPWLY*KYPILC
Trigger: GCAAAGTATAGGATATTTGCAATATAGCCATGGGGA...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGCGCCCCGGGGCTGAGTaGTTGGCAGCCACATTTGTG +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMRPGAE*LAATFV
Trigger: CACAAATGTGGCTGCCAAGCACTCAGCCCCGGGGCG...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGGGTGGAATAGGCACCTaGAGCTCCCAATGCCTGAGG +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLGGIGT*SSQCLR
Trigger: CCTCAGGCATTGGGAGCTCCAGGTGCCTATTCCACC...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATCTCCATGGCATCTGGTaGTGGAATAGGCACCTGGAG +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNLHGIW*WNRHLE
Trigger: CTCCAGGTGCCTATTCCACCACCAGATGCCATGGAG...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTAGAAGGATCATTACCTaGGGACACTGGACACATATG +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASRRIIT*GHWTHM
Trigger: CATATGTGTCCAGTGTCCCCAGGTAATGATCCTTCT...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTACACAATGGGCCAAATaGAGCAAGACACACCTGTGT +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSTQWAK*SKTHLC
Trigger: ACACAGGTGTGTCTTGCTCCATTTGGCCCATTGTGT...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACACACAATGGGCCAAATaGAGCAAGACACACCTGTGT +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHTQWAK*SKTHLC
Trigger: ACACAGGTGTGTCTTGCTCCATTTGGCCCATTGTGT...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGAAACCCAGGCAGGAGTaGAGTCCCCATGAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLKPRQE*SPHEPV
Trigger: GACAGGCTCATGGGGACTCCACTCCTGCCTGGGTTT...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACAAGGAGATAACATCATaGCAGGATACCAGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHKEITS*QDTSGL
Trigger: GAGGCCACTGGTATCCTGCCATGATGTTATCTCCTT...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAACCTTATCCAAGCCTTaGGCCTCTCTTTATCATGCA +
Preference number: 4 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSTLSKP*ASLYHA
Trigger: TGCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGT...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTGCTGAGATCATGCCATaGCACTCCAGCCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFAEIMP*HSSLVT
Trigger: TGTCACCAGGCTGGAGTGCCATGGCATGATCTCAGC...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTCACGAGGTCAAGAGATaGAGGCCATCCTGGCCAACA +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFHEVKR*RPSWPT
Trigger: TGTTGGCCAGGATGGCCTCCATCTCTTGACCTCGTG...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTGGGAGGGAAGGTGGGTaGATCACGAGGTCAAGAGAT +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFGREGG*ITRSRD
Trigger: ATCTCTTGACCTCGTGATCCACCCACCTTCCCTCCC...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCGTAATTCCAGTACTTTaGGAGGGAAGGTGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIVIPVL*EGRWVD
Trigger: ATCCACCCACCTTCCCTCCCAAAGTACTGGAATTAC...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGGTAATTCCAGTACTTTaGGAGGGAAGGTGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRVIPVL*EGRWVD
Trigger: ATCCACCCACCTTCCCTCCCAAAGTACTGGAATTAC...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTAATGACAGCCTCGGCTaGGCACAGTGGCTAATGCCT +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFNDSLG*AQWLMP
Trigger: AGGCATTAGCCACTGTGCCCAGCCGAGGCTGTCATT...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGCACTCCTCCCCATaGCTATATTGCAAATATCCT +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASLHSSP*LYCKYP
Trigger: AGGATATTTGCAATATAGCCATGGGGAGGAGTGCAG...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCACTGCACTCCTCCCCATaGCTATATTGCAAATATCCT +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSLHSSP*LYCKYP
Trigger: AGGATATTTGCAATATAGCCATGGGGAGGAGTGCAG...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTTGGATCCGAGAGTGTTaGAGGGGCAGCTCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFWIREC*RGSSSF
Trigger: GAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCA...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGTGTCCAGATGGGCTTTaGTTGCGGCGATGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMCPDGL*LRRCRP
Trigger: TGGCCGGCATCGCCGCAATCAAAGCCCATCTGGACA...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGGCTGTCACAAACCCATaGGGATCTGCAGGGTGTCTC +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLAVTNP*GSAGCL
Trigger: GAGACACCCTGCAGATCCTCATGGGTTTGTGACAGC...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACAGGAGGCAAATTTCATaGAGTCCATGTGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDRRQIS*SPCEMA
Trigger: AGCCATTTCACATGGACTTCATGAAATTTGCCTCCT...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAAGGAGGCAAATTTCATaGAGTCCATGTGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSRRQIS*SPCEMA
Trigger: AGCCATTTCACATGGACTTCATGAAATTTGCCTCCT...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTACCTCCTACCTAACATaGCTGACTCCACTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFTSYLT*LTPLRE
Trigger: TTCCCTCAGTGGAGTCAGTCATGTTAGGTAGGAGGT...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCACCTCCTACCTAACATaGCTGACTCCACTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFTSYLT*LTPLRE
Trigger: TTCCCTCAGTGGAGTCAGTCATGTTAGGTAGGAGGT...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGAGGTGGAGGTTGCAGTaGGCTGAGATCATGCCATGG +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLRWRLQ*AEIMPW
Trigger: CCATGGCATGATCTCAGCTCACTGCAACCTCCACCT...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACCCTATACTTTGCATGTaGTCACACAAAGAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDPILCM*SHKEGF
Trigger: GAAACCCTCTTTGTGTGATCACATGCAAAGTATAGG...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCACCTATACTTTGCATGTaGTCACACAAAGAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSPILCM*SHKEGF
Trigger: GAAACCCTCTTTGTGTGATCACATGCAAAGTATAGG...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR TCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTGGTGGACATGTTCACTaGGAAGGACAGTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFGGHVH*EGQSVH
Trigger: GTGGACTGACTGTCCTTCTCAGTGAACATGTCCACC...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATGGTGGACATGTTCACTaGGAAGGACAGTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNGGHVH*EGQSVH
Trigger: GTGGACTGACTGTCCTTCTCAGTGAACATGTCCACC...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGTTATTCCTCTTTCTCTaGGAAGAACTTGACCCCTCG +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRLFLFL*EELDPS
Trigger: CGAGGGGTCAAGTTCTTCTCAGAGAAAGAGGAATAA...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGTCTTGTGATGTCTTCTaGGAACCAACTTATTCCTCT +
Preference number: 4 (lower is better)
Translates to: EHRPCGSESVGGAALASLSCDVF*EPTYSS
Trigger: AGAGGAATAAGTTGGTTCTCAGAAGACATCACAAGA...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTGCCTTAGGACAGAGATaGGAGAAACACCTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSALGQR*EKHLSN
Trigger: ATTGGAAAGGTGTTTCTCTCATCTCTGTCCTAAGGC...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCGCCTTAGGACAGAGATaGGAGAAACACCTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIALGQR*EKHLSN
Trigger: ATTGGAAAGGTGTTTCTCTCATCTCTGTCCTAAGGC...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCACAGCCACATTTGTGTTaGGATCTTGATTTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSQPHLC*DLDFCS
Trigger: AGAGCAGAAATCAAGATCTCAACACAAATGTGGCTG...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383226.4
CDS-3UTR GCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTGCAGGTAGTGGAACTTaGGGAACAAATGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFAGSGT*GTNGQA
Trigger: AGCCTGACCATTTGTTCCGCAAGTTCCACTACCTGC...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGACCTGGAGCTCCCAATaGCTGAGGAGTGGCGCATCC +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMTWSSQ*LRSGAS
Trigger: GGATGCGCCACTCCTCAGGCATTGGGAGCTCCAGGT...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTAAACCCATGAGGATCTaGAGGGTGTCTCCCACAAGT +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFKPMRI*RVSPTS
Trigger: ACTTGTGGGAGACACCCTGCAGATCCTCATGGGTTT...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp ATCTTGATTTCTGCTCTAACTACACAGGGCTGGGATGGACACCTGCTCCAAGTTAAACCCATGAGGATCTaGAGGGTGTCTCCCACAAGT +
Preference number: 4 (lower is better)
Translates to: ILISALTTQGWDGHLLQVKPMRI*RVSPTS
Trigger: ACTTGTGGGAGACACCCTGCAGATCCTCATGGGTTT...AACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAGTTAGAGCAGAAATCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383226.4
CDS-3UTR GCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCAAACCCATGAGGATCTaGAGGGTGTCTCCCACAAGT +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFKPMRI*RVSPTS
Trigger: ACTTGTGGGAGACACCCTGCAGATCCTCATGGGTTT...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTAAGGTCCAGGATGGCTaGATCAGAGTCATCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFKVQDG*IRVIQS
Trigger: GCTCTGGATGACTCTGATGCAGCCATCCTGGACCTT...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGTTTTCCAGGACCAACTaGTCACAGTTCAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRFSRTN*SQFKPS
Trigger: TGAGGGTTTGAACTGTGAGCAGTTGGTCCTGGAAAA...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTACCAGGATGTCCAGATaGGCTTTGATTGCGGCGATG +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFTRMSR*ALIAAM
Trigger: CATCGCCGCAATCAAAGCCCATCTGGACATCCTGGT...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATACCAGGATGTCCAGATaGGCTTTGATTGCGGCGATG +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNTRMSR*ALIAAM
Trigger: CATCGCCGCAATCAAAGCCCATCTGGACATCCTGGT...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGTGGCTCTGCTGCGGTTaGAGCGCTCCACCAGGATGT +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMWLCCG*SAPPGC
Trigger: ACATCCTGGTGGAGCGCTCCAACCGCAGCAGAGCCA...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGGAGCACGGTCACCCGTaGAGGCACGTTGATGGCTCT +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMEHGHP*RHVDGS
Trigger: AGAGCCATCAACGTGCCTCCACGGGTGACCGTGCTC...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATCCAATGCCTGAGGAGTaGCGCATCCAGGCCCCAGTG +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHPMPEE*RIQAPV
Trigger: CACTGGGGCCTGGATGCGCCACTCCTCAGGCATTGG...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGCATGGCATCTGGTGGTaGAATAGGCACCTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLHGIWW*NRHLEL
Trigger: GAGCTCCAGGTGCCTATTCCACCACCAGATGCCATG...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGAGAAGGATCATTACCTaGGGACACTGGACACATATG +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRRRIIT*GHWTHM
Trigger: CATATGTGTCCAGTGTCCCCAGGTAATGATCCTTCT...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTTGCCAGCCAGAGCTTTaGGTAGAGCAAGAATGTGTG +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFCQPEL*VEQECV
Trigger: CACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCA...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCACCTTATCCAAGCCTTaGGCCTCTCTTTATCATGCA +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIITLSKP*ASLYHA
Trigger: TGCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGT...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTCTGCACTCCTCCCCATaGCTATATTGCAAATATCCT +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSLHSSP*LYCKYP
Trigger: AGGATATTTGCAATATAGCCATGGGGAGGAGTGCAG...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACCTGCACTCCTCCCCATaGCTATATTGCAAATATCCT +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHLHSSP*LYCKYP
Trigger: AGGATATTTGCAATATAGCCATGGGGAGGAGTGCAG...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGGCTAAAATCTACCCTTaGGCCCTGCACTCCTCCCCA +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLAKIYP*ALHSSP
Trigger: TGGGGAGGAGTGCAGGGCCCAAGGGTAGATTTTAGC...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTTGTTCCTGGGAGGCCTaGCTAAAATCTACCCTTGGG +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFCSWEA*LKSTLG
Trigger: CCCAAGGGTAGATTTTAGCCAGGCCTCCCAGGAACA...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTTCCGAGTTCTGTTCCTaGGAGGCCTGGCTAAAATCT +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFSEFCS*EAWLKS
Trigger: AGATTTTAGCCAGGCCTCCCAGGAACAGAACTCGGA...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCTCCGAGTTCTGTTCCTaGGAGGCCTGGCTAAAATCT +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFSEFCS*EAWLKS
Trigger: AGATTTTAGCCAGGCCTCCCAGGAACAGAACTCGGA...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCAGAACACAGACCATGTaGATCCGAGAGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFRTQTM*IRECWR
Trigger: CCTCCAACACTCTCGGATCCACATGGTCTGTGTTCT...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACCACCTGCTCCAAGTTTaGCCAGTCATTTATTTTTCC +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDHLLQV*PVIYFS
Trigger: GGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTG...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCACACCTGCTCCAAGTTTaGCCAGTCATTTATTTTTCC +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSHLLQV*PVIYFS
Trigger: GGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTG...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCACACCTGCTCCAAGTTTaGCCAGTCATTTATTTTTCC +
Preference number: 4 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSHLLQV*PVIYFS
Trigger: GGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTG...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACGAGATCAGAGATTGTTaGGTACACACGTATCTTGTG +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDEIRDC*VHTYLV
Trigger: CACAAGATACGTGTGTACCCAACAATCTCTGATCTC...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTGAGATCAGAGATTGTTaGGTACACACGTATCTTGTG +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASEIRDC*VHTYLV
Trigger: CACAAGATACGTGTGTACCCAACAATCTCTGATCTC...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAGAGATCAGAGATTGTTaGGTACACACGTATCTTGTG +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSEIRDC*VHTYLV
Trigger: CACAAGATACGTGTGTACCCAACAATCTCTGATCTC...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATTGTCCAGATGGGCTTTaGTTGCGGCGATGCCGGCCA +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHCPDGL*LRRCRP
Trigger: TGGCCGGCATCGCCGCAATCAAAGCCCATCTGGACA...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATATAGACGTCCTCGGCTaGGGGCACGAAGGGCAGGTA +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHIDVLG*GHEGQV
Trigger: TACCTGCCCTTCGTGCCCTCAGCCGAGGACGTCTAT...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCATTCATGAAGTCCATGTaGAATGGCTCATTCACAAAG +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSFMKSM*NGSFTK
Trigger: CTTTGTGAATGAGCCATTTCACATGGACTTCATGAA...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGAGGAGGCAAATTTCATaGAGTCCATGTGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRRRQIS*SPCEMA
Trigger: AGCCATTTCACATGGACTTCATGAAATTTGCCTCCT...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCATATTTACTTGTACCTTaGTTGGCTGATGCCCTAACA +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSYLLVP*LADALT
Trigger: TGTTAGGGCATCAGCCAATCAAGGTACAAGTAAATA...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACCCTATACTTTGCATGTaGTCACACAAAGAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHPILCM*SHKEGF
Trigger: GAAACCCTCTTTGTGTGATCACATGCAAAGTATAGG...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCCCTATACTTTGCATGTaGTCACACAAAGAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIPILCM*SHKEGF
Trigger: GAAACCCTCTTTGTGTGATCACATGCAAAGTATAGG...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGCCTATACTTTGCATGTaGTCACACAAAGAGGGTTTC +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRPILCM*SHKEGF
Trigger: GAAACCCTCTTTGTGTGATCACATGCAAAGTATAGG...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGGGTGGACATGTTCACTaGGAAGGACAGTCAGTCCAC +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLGGHVH*EGQSVH
Trigger: GTGGACTGACTGTCCTTCTCAGTGAACATGTCCACC...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCATCTTGTGATGTCTTCTaGGAACCAACTTATTCCTCT +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSSCDVF*EPTYSS
Trigger: AGAGGAATAAGTTGGTTCTCAGAAGACATCACAAGA...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTTACACACGTATCTTGTaGTGTCTTCTGAGAACCAAC +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSYTRIL*CLLRTN
Trigger: GTTGGTTCTCAGAAGACATCACAAGATACGTGTGTA...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGTACACACGTATCTTGTaGTGTCTTCTGAGAACCAAC +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRYTRIL*CLLRTN
Trigger: GTTGGTTCTCAGAAGACATCACAAGATACGTGTGTA...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAGAAACACCTTTCCAATaGTGCATCAAGTTAACGTCT +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSETPFQ*CIKLTS
Trigger: AGACGTTAACTTGATGCATCATTGGAAAGGTGTTTC...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACGAAACACCTTTCCAATaGTGCATCAAGTTAACGTCT +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDETPFQ*CIKLTS
Trigger: AGACGTTAACTTGATGCATCATTGGAAAGGTGTTTC...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGAAACACCTTTCCAATaGTGCATCAAGTTAACGTCT +
Preference number: 4 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSETPFQ*CIKLTS
Trigger: AGACGTTAACTTGATGCATCATTGGAAAGGTGTTTC...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR TCA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTGAAACACCTTTCCAATaGTGCATCAAGTTAACGTCT +
Preference number: 4 (lower is better)
Translates to: REHRPCGSESVGGAALASETPFQ*CIKLTS
Trigger: AGACGTTAACTTGATGCATCATTGGAAAGGTGTTTC...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGTCTCAGTCCGTGTGGTaGGGACAGGAACAAGGCGGA +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMSQSVW*GQEQGG
Trigger: TCCGCCTTGTTCCTGTCCTCACCACACGGACTGAGA...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGAGGAACAGGATAATCTaGATCCCTTTCAGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRRNRII*IPFRVN
Trigger: GTTTACCCTGAAAGGGATGCAGATTATCCTGTTCCT...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTAGGAACAGGATAATCTaGATCCCTTTCAGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSRNRII*IPFRVN
Trigger: GTTTACCCTGAAAGGGATGCAGATTATCCTGTTCCT...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGCAAAGTAACACACAATaGGCCAAATGGAGCAAGACA +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRQSNTQ*AKWSKT
Trigger: TGTCTTGCTCCATTTGGCCCATTGTGTGTTACTTTG...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTAAGGAGATAACATCATaGCAGGATACCAGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFKEITS*QDTSGL
Trigger: GAGGCCACTGGTATCCTGCCATGATGTTATCTCCTT...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGCGAGCCACCATGCCTaGTTAATTTTTAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSASHHA*LIFKSF
Trigger: GAAAGATTTAAAAATTAACCAGGCATGGTGGCTCGC...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000229829.7
ENST00000438987.2
CDS-3UTR CCA 90 bp ATCTTGATTTCTGCTCTAACTACACAGGGCTGGGATGGACACCTGCTCCAAGTTGTAATTCCAGTACTTTaGGAGGGAAGGTGGGTGGAT +
Preference number: 4 (lower is better)
Translates to: ILISALTTQGWDGHLLQVVIPVL*EGRWVD
Trigger: ATCCACCCACCTTCCCTCCCAAAGTACTGGAATTAC...AACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAGTTAGAGCAGAAATCAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383226.4
CDS-3UTR CCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCGAGGGTTTCTGTTACTaGCACACAAAAAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIEGFCY*HTKSLP
Trigger: AGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTC...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGTGTTCCTGGGAGGCCTaGCTAAAATCTACCCTTGGG +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLCSWEA*LKSTLG
Trigger: CCCAAGGGTAGATTTTAGCCAGGCCTCCCAGGAACA...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTTCCGAGTTCTGTTCCTaGGAGGCCTGGCTAAAATCT +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFSEFCS*EAWLKS
Trigger: AGATTTTAGCCAGGCCTCCCAGGAACAGAACTCGGA...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTCACCTGCTCCAAGTTTaGCCAGTCATTTATTTTTCC +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSHLLQV*PVIYFS
Trigger: GGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTG...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACTATTTACTTGTACCTTaGTTGGCTGATGCCCTAACA +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHYLLVP*LADALT
Trigger: TGTTAGGGCATCAGCCAATCAAGGTACAAGTAAATA...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGTCTTGTGATGTCTTCTaGGAACCAACTTATTCCTCT +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRSCDVF*EPTYSS
Trigger: AGAGGAATAAGTTGGTTCTCAGAAGACATCACAAGA...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTGAAACACCTTTCCAATaGTGCATCAAGTTAACGTCT +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSETPFQ*CIKLTS
Trigger: AGACGTTAACTTGATGCATCATTGGAAAGGTGTTTC...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTGCCTTAGGACAGAGATaGGAGAAACACCTTTCCAAT +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFALGQR*EKHLSN
Trigger: ATTGGAAAGGTGTTTCTCTCATCTCTGTCCTAAGGC...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGGCAGGTAGTGGAACTTaGGGAACAAATGGTCAGGCT +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLAGSGT*GTNGQA
Trigger: AGCCTGACCATTTGTTCCGCAAGTTCCACTACCTGC...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTCCCCATGGCTATATTaGAAATATCCTATACTTTGC +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDSPWLY*KYPILC
Trigger: GCAAAGTATAGGATATTTGCAATATAGCCATGGGGA...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATGCTGGGAATAGAAGCTaGTCTGGGCCACTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHAGNRS*SGPLPQ
Trigger: CTGAGGGAGTGGCCCAGACCAGCTTCTATTCCCAGC...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGCTCCATGGCATCTGGTaGTGGAATAGGCACCTGGAG +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMLHGIW*WNRHLE
Trigger: CTCCAGGTGCCTATTCCACCACCAGATGCCATGGAG...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACGAAGTCCATGTGAAATaGCTCATTCACAAAGTAACA +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDEVHVK*LIHKVT
Trigger: TGTTACTTTGTGAATGAGCCATTTCACATGGACTTC...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATAAACCCAGGCAGGAGTaGAGTCCCCATGAGCCTGTC +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHKPRQE*SPHEPV
Trigger: GACAGGCTCATGGGGACTCCACTCCTGCCTGGGTTT...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACGCGAGCCACCATGCCTaGTTAATTTTTAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHASHHA*LIFKSF
Trigger: GAAAGATTTAAAAATTAACCAGGCATGGTGGCTCGC...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTGCGAGCCACCATGCCTaGTTAATTTTTAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSASHHA*LIFKSF
Trigger: GAAAGATTTAAAAATTAACCAGGCATGGTGGCTCGC...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTCCATCAGGGTCTTCTaGTCATTGATTTCAACTTAT +
Preference number: 4 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDSIRVF*SLISTY
Trigger: ATAAGTTGAAATCAATGACCAGAAGACCCTGATGGA...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGAGAACACAGACCATGTaGATCCGAGAGTGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLRTQTM*IRECWR
Trigger: CCTCCAACACTCTCGGATCCACATGGTCTGTGTTCT...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACGCGAGCCACCATGGCTaGTTAATTTTTAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHASHHG*LIFKSF
Trigger: GAAAGATTTAAAAATTAACCAGCCATGGTGGCTCGC...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000383226.4
ENST00000426685.2
ENST00000434335.2
CDS-3UTR TCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATAGGTGGAGGTTGCAGTaGGCTGAGATCATGCCATGG +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHRWRLQ*AEIMPW
Trigger: CCATGGCATGATCTCAGCTCACTGCAACCTCCACCT...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGTGTACCTTGATTGGCTaGTGCCCTAACAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMCTLIG*CPNRPR
Trigger: CCTGGGTCTGTTAGGGCATCAGCCAATCAAGGTACA...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTAGTAATTTAAAGCTGTaGCTAGGAGACACAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFSNLKL*LGDTAS
Trigger: AGAGGCTGTGTCTCCTAGTCACAGCTTTAAATTACT...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATTTATTCCTCTTTCTCTaGGAAGAACTTGACCCCTCG +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNLFLFL*EELDPS
Trigger: CGAGGGGTCAAGTTCTTCTCAGAGAAAGAGGAATAA...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCTACACACGTATCTTGTaGTGTCTTCTGAGAACCAAC +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFYTRIL*CLLRTN
Trigger: GTTGGTTCTCAGAAGACATCACAAGATACGTGTGTA...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATATCCCCAGCACCACATaGCTCACCCCTGGAAGAACT +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHIPSTT*LTPGRT
Trigger: AGTTCTTCCAGGGGTGAGGCATGTGGTGCTGGGGAT...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTAGGAACAGGATAATCTaGATCCCTTTCAGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFRNRII*IPFRVN
Trigger: GTTTACCCTGAAAGGGATGCAGATTATCCTGTTCCT...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTTTTTCCAGGACCAACTaGTCACAGTTCAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFFSRTN*SQFKPS
Trigger: TGAGGGTTTGAACTGTGAGCAGTTGGTCCTGGAAAA...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
46% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATTTTTCCAGGACCAACTaGTCACAGTTCAAACCCTCA +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNFSRTN*SQFKPS
Trigger: TGAGGGTTTGAACTGTGAGCAGTTGGTCCTGGAAAA...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGTCCCCATGGCTATATTaGAAATATCCTATACTTTGC +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRSPWLY*KYPILC
Trigger: GCAAAGTATAGGATATTTGCAATATAGCCATGGGGA...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATCTCCATGGCATCTGGTaGTGGAATAGGCACCTGGAG +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHLHGIW*WNRHLE
Trigger: CTCCAGGTGCCTATTCCACCACCAGATGCCATGGAG...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTAGAAGGATCATTACCTaGGGACACTGGACACATATG +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFRRIIT*GHWTHM
Trigger: CATATGTGTCCAGTGTCCCCAGGTAATGATCCTTCT...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATAGAAGGATCATTACCTaGGGACACTGGACACATATG +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNRRIIT*GHWTHM
Trigger: CATATGTGTCCAGTGTCCCCAGGTAATGATCCTTCT...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATACCTTATCCAAGCCTTaGGCCTCTCTTTATCATGCA +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNTLSKP*ASLYHA
Trigger: TGCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGT...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCATTCTTATGTGCATTCTaGTTTGAAAACCGTAATCTG +
Preference number: 4 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSFLCAF*FENRNL
Trigger: CAGATTACGGTTTTCAAACCAGAATGCACATAAGAA...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATGCTGAGATCATGCCATaGCACTCCAGCCTGGTGACA +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHAEIMP*HSSLVT
Trigger: TGTCACCAGGCTGGAGTGCCATGGCATGATCTCAGC...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATCTTTGGGAGGGAAGGTaGGTGGATCACGAGGTCAAG +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHLWEGR*VDHEVK
Trigger: CTTGACCTCGTGATCCACCCACCTTCCCTCCCAAAG...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATAATGACAGCCTCGGCTaGGCACAGTGGCTAATGCCT +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHNDSLG*AQWLMP
Trigger: AGGCATTAGCCACTGTGCCCAGCCGAGGCTGTCATT...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCGAGGGTTTCTGTTACTaGCACACAAAAAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFEGFCY*HTKSLP
Trigger: AGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTC...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGTGTTCCTGGGAGGCCTaGCTAAAATCTACCCTTGGG +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMCSWEA*LKSTLG
Trigger: CCCAAGGGTAGATTTTAGCCAGGCCTCCCAGGAACA...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATTGGATCCGAGAGTGTTaGAGGGGCAGCTCTAGCTTC +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHWIREC*RGSSSF
Trigger: GAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCA...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCACCTGCTCCAAGTTTaGCCAGTCATTTATTTTTCC +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFHLLQV*PVIYFS
Trigger: GGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTG...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCTTCATGAAGTCCATGTaGAATGGCTCATTCACAAAG +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFFMKSM*NGSFTK
Trigger: CTTTGTGAATGAGCCATTTCACATGGACTTCATGAA...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGACCTCCTACCTAACATaGCTGACTCCACTGAGGGAA +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMTSYLT*LTPLRE
Trigger: TTCCCTCAGTGGAGTCAGTCATGTTAGGTAGGAGGT...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATTGTACCTTGATTGGCTaGTGCCCTAACAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHCTLIG*CPNRPR
Trigger: CCTGGGTCTGTTAGGGCATCAGCCAATCAAGGTACA...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTTATTTACTTGTACCTTaGTTGGCTGATGCCCTAACA +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFYLLVP*LADALT
Trigger: TGTTAGGGCATCAGCCAATCAAGGTACAAGTAAATA...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTAGTAATTTAAAGCTGTaGCTAGGAGACACAGCCTCT +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFSNLKL*LGDTAS
Trigger: AGAGGCTGTGTCTCCTAGTCACAGCTTTAAATTACT...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTTACACACGTATCTTGTaGTGTCTTCTGAGAACCAAC +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFYTRIL*CLLRTN
Trigger: GTTGGTTCTCAGAAGACATCACAAGATACGTGTGTA...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCGAAACACCTTTCCAATaGTGCATCAAGTTAACGTCT +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFETPFQ*CIKLTS
Trigger: AGACGTTAACTTGATGCATCATTGGAAAGGTGTTTC...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGAAACCCATGAGGATCTaGAGGGTGTCTCCCACAAGT +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMKPMRI*RVSPTS
Trigger: ACTTGTGGGAGACACCCTGCAGATCCTCATGGGTTT...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGAGAAGGATCATTACCTaGGGACACTGGACACATATG +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLRRIIT*GHWTHM
Trigger: CATATGTGTCCAGTGTCCCCAGGTAATGATCCTTCT...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTCAAAGTAACACACAATaGGCCAAATGGAGCAAGACA +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFQSNTQ*AKWSKT
Trigger: TGTCTTGCTCCATTTGGCCCATTGTGTGTTACTTTG...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGACCTTATCCAAGCCTTaGGCCTCTCTTTATCATGCA +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLTLSKP*ASLYHA
Trigger: TGCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGT...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGTTCTTATGTGCATTCTaGTTTGAAAACCGTAATCTG +
Preference number: 4 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRFLCAF*FENRNL
Trigger: CAGATTACGGTTTTCAAACCAGAATGCACATAAGAA...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTTCTTATGTGCATTCTaGTTTGAAAACCGTAATCTG +
Preference number: 4 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIFLCAF*FENRNL
Trigger: CAGATTACGGTTTTCAAACCAGAATGCACATAAGAA...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGCTGCACTCCTCCCCATaGCTATATTGCAAATATCCT +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLLHSSP*LYCKYP
Trigger: AGGATATTTGCAATATAGCCATGGGGAGGAGTGCAG...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTGAGATCAGAGATTGTTaGGTACACACGTATCTTGTG +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFEIRDC*VHTYLV
Trigger: CACAAGATACGTGTGTACCCAACAATCTCTGATCTC...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTTATTTACTTGTACCTTaGTTGGCTGATGCCCTAACA +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFYLLVP*LADALT
Trigger: TGTTAGGGCATCAGCCAATCAAGGTACAAGTAAATA...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATTATTTACTTGTACCTTaGTTGGCTGATGCCCTAACA +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNYLLVP*LADALT
Trigger: TGTTAGGGCATCAGCCAATCAAGGTACAAGTAAATA...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGAGTAATTTAAAGCTGTaGCTAGGAGACACAGCCTCT +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLSNLKL*LGDTAS
Trigger: AGAGGCTGTGTCTCCTAGTCACAGCTTTAAATTACT...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTTCTTGTGATGTCTTCTaGGAACCAACTTATTCCTCT +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFSCDVF*EPTYSS
Trigger: AGAGGAATAAGTTGGTTCTCAGAAGACATCACAAGA...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGTACACACGTATCTTGTaGTGTCTTCTGAGAACCAAC +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLYTRIL*CLLRTN
Trigger: GTTGGTTCTCAGAAGACATCACAAGATACGTGTGTA...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp ATCTTGATTTCTGCTCTAACTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTCCCCATGGCTATATTaGAAATATCCTATACTTTGC +
Preference number: 4 (lower is better)
Translates to: ILISALTTQGWDGHLLQVSPWLY*KYPILC
Trigger: GCAAAGTATAGGATATTTGCAATATAGCCATGGGGA...AACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAGTTAGAGCAGAAATCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000383226.4
CDS-3UTR CCA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTGAAGTCCATGTGAAATaGCTCATTCACAAAGTAACA +
Preference number: 4 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFEVHVK*LIHKVT
Trigger: TGTTACTTTGTGAATGAGCCATTTCACATGGACTTC...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGCACCTGCTCCAAGTTTaGCCAGTCATTTATTTTTCC +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLHLLQV*PVIYFS
Trigger: GGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTG...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGGAGATCAGAGATTGTTaGGTACACACGTATCTTGTG +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLEIRDC*VHTYLV
Trigger: CACAAGATACGTGTGTACCCAACAATCTCTGATCTC...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTGCGAGCCACCATGGCTaGTTAATTTTTAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFASHHG*LIFKSF
Trigger: GAAAGATTTAAAAATTAACCAGCCATGGTGGCTCGC...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000383226.4
ENST00000426685.2
ENST00000434335.2
CDS-3UTR TCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGTATTTACTTGTACCTTaGTTGGCTGATGCCCTAACA +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLYLLVP*LADALT
Trigger: TGTTAGGGCATCAGCCAATCAAGGTACAAGTAAATA...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGTTATTCCTCTTTCTCTaGGAAGAACTTGACCCCTCG +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMLFLFL*EELDPS
Trigger: CGAGGGGTCAAGTTCTTCTCAGAGAAAGAGGAATAA...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATTCCCCATGGCTATATTaGAAATATCCTATACTTTGC +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNSPWLY*KYPILC
Trigger: GCAAAGTATAGGATATTTGCAATATAGCCATGGGGA...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTGAAGTCCATGTGAAATaGCTCATTCACAAAGTAACA +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFEVHVK*LIHKVT
Trigger: TGTTACTTTGTGAATGAGCCATTTCACATGGACTTC...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATAAGGAGATAACATCATaGCAGGATACCAGTGGCCTC +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHKEITS*QDTSGL
Trigger: GAGGCCACTGGTATCCTGCCATGATGTTATCTCCTT...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp ATCTTGATTTCTGCTCTAACTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTTCTTATGTGCATTCTaGTTTGAAAACCGTAATCTG +
Preference number: 4 (lower is better)
Translates to: ILISALTTQGWDGHLLQVFLCAF*FENRNL
Trigger: CAGATTACGGTTTTCAAACCAGAATGCACATAAGAA...AACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAGTTAGAGCAGAAATCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000383226.4
CDS-3UTR CCA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCTTCTTATGTGCATTCTaGTTTGAAAACCGTAATCTG +
Preference number: 4 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFFLCAF*FENRNL
Trigger: CAGATTACGGTTTTCAAACCAGAATGCACATAAGAA...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTTCCATCAGGGTCTTCTaGTCATTGATTTCAACTTAT +
Preference number: 4 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFSIRVF*SLISTY
Trigger: ATAAGTTGAAATCAATGACCAGAAGACCCTGATGGA...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATTCCATCAGGGTCTTCTaGTCATTGATTTCAACTTAT +
Preference number: 4 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNSIRVF*SLISTY
Trigger: ATAAGTTGAAATCAATGACCAGAAGACCCTGATGGA...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATTTATTCCTCTTTCTCTaGGAAGAACTTGACCCCTCG +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHLFLFL*EELDPS
Trigger: CGAGGGGTCAAGTTCTTCTCAGAGAAAGAGGAATAA...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGGAAGTCCATGTGAAATaGCTCATTCACAAAGTAACA +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLEVHVK*LIHKVT
Trigger: TGTTACTTTGTGAATGAGCCATTTCACATGGACTTC...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATACCTTATCCAAGCCTTaGGCCTCTCTTTATCATGCA +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHTLSKP*ASLYHA
Trigger: TGCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGT...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGGAGGGTTTCTGTTACTaGCACACAAAAAGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMEGFCY*HTKSLP
Trigger: AGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTC...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATCTGCACTCCTCCCCATaGCTATATTGCAAATATCCT +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHLHSSP*LYCKYP
Trigger: AGGATATTTGCAATATAGCCATGGGGAGGAGTGCAG...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGTTCATGAAGTCCATGTaGAATGGCTCATTCACAAAG +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMFMKSM*NGSFTK
Trigger: CTTTGTGAATGAGCCATTTCACATGGACTTCATGAA...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATAGGAGGCAAATTTCATaGAGTCCATGTGAAATGGCT +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHRRQIS*SPCEMA
Trigger: AGCCATTTCACATGGACTTCATGAAATTTGCCTCCT...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR TCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGTCTTGTGATGTCTTCTaGGAACCAACTTATTCCTCT +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMSCDVF*EPTYSS
Trigger: AGAGGAATAAGTTGGTTCTCAGAAGACATCACAAGA...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATAGGAACAGGATAATCTaGATCCCTTTCAGGGTAAAC +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHRNRII*IPFRVN
Trigger: GTTTACCCTGAAAGGGATGCAGATTATCCTGTTCCT...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGTTCTTATGTGCATTCTaGTTTGAAAACCGTAATCTG +
Preference number: 4 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLFLCAF*FENRNL
Trigger: CAGATTACGGTTTTCAAACCAGAATGCACATAAGAA...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGGCGAGCCACCATGCCTaGTTAATTTTTAAATCTTTC +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMASHHA*LIFKSF
Trigger: GAAAGATTTAAAAATTAACCAGGCATGGTGGCTCGC...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATCACCTGCTCCAAGTTTaGCCAGTCATTTATTTTTCC +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHHLLQV*PVIYFS
Trigger: GGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTG...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGGAAGTCCATGTGAAATaGCTCATTCACAAAGTAACA +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMEVHVK*LIHKVT
Trigger: TGTTACTTTGTGAATGAGCCATTTCACATGGACTTC...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CCA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGTCCATCAGGGTCTTCTaGTCATTGATTTCAACTTAT +
Preference number: 4 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMSIRVF*SLISTY
Trigger: ATAAGTTGAAATCAATGACCAGAAGACCCTGATGGA...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR GCA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATTCCCCATGGCTATATTaGAAATATCCTATACTTTGC +
Preference number: 4 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHSPWLY*KYPILC
Trigger: GCAAAGTATAGGATATTTGCAATATAGCCATGGGGA...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGATGGCTCTGCTGCGGTaGGAGCGCTCCACCAGGATG +
Preference number: 5 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGMALLR*ERSTRM
Trigger: CATCCTGGTGGAGCGCTCCAACCGCAGCAGAGCCAT...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGACCCGTGGAGGCACGTaGATGGCTCTGCTGCGGTTG +
Preference number: 5 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGTRGGT*MALLRL
Trigger: CAACCGCAGCAGAGCCATCAACGTGCCTCCACGGGT...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGAGCAGTCCTGTCCCCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGSSPVP*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGGGGACAGGACTGCT...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGATGTCCAGATGGGCTTaGATTGCGGCGATGCCGGCC +
Preference number: 5 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGMSRWA*IAAMPA
Trigger: GGCCGGCATCGCCGCAATCAAAGCCCATCTGGACAT...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGAGCTCCACCCGAGACTaGGGGAGCACGGTCACCCGT +
Preference number: 5 (lower is better)
Translates to: EHRPCGSESVGGAALASLSSTRD*GSTVTR
Trigger: ACGGGTGACCGTGCTCCCCAAGTCTCGGGTGGAGCT...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGCCCGGGGCTGAGTGCTaGGCAGCCACATTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGPGAEC*AATFVL
Trigger: CAACACAAATGTGGCTGCCAAGCACTCAGCCCCGGG...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTAGCTCCACCCGAGACTaGGGGAGCACGGTCACCCGT +
Preference number: 5 (lower is better)
Translates to: REHRPCGSESVGGAALASSSTRD*GSTVTR
Trigger: ACGGGTGACCGTGCTCCCCAAGTCTCGGGTGGAGCT...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACAGCTCCACCCGAGACTaGGGGAGCACGGTCACCCGT +
Preference number: 5 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDSSTRD*GSTVTR
Trigger: ACGGGTGACCGTGCTCCCCAAGTCTCGGGTGGAGCT...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTAAGACAGCCTCCCTGTaGCTGCCCCCTGCACTCCCG +
Preference number: 5 (lower is better)
Translates to: REHRPCGSESVGGAALASKTASL*LPPALP
Trigger: CGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTT...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR CAA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGAGTCCACCTCAGACCTaGGGGATCCCCCTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGSPPQT*GIPLSH
Trigger: ATGGGAAAGGGGGATCCCCAAGGTCTGAGGTGGACT...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACATGGCTCTGCTGCGGTaGGAGCGCTCCACCAGGATG +
Preference number: 5 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDMALLR*ERSTRM
Trigger: CATCCTGGTGGAGCGCTCCAACCGCAGCAGAGCCAT...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAATGGCTCTGCTGCGGTaGGAGCGCTCCACCAGGATG +
Preference number: 5 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSMALLR*ERSTRM
Trigger: CATCCTGGTGGAGCGCTCCAACCGCAGCAGAGCCAT...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR CAA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTACCCGTGGAGGCACGTaGATGGCTCTGCTGCGGTTG +
Preference number: 5 (lower is better)
Translates to: REHRPCGSESVGGAALASTRGGT*MALLRL
Trigger: CAACCGCAGCAGAGCCATCAACGTGCCTCCACGGGT...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTAGCTCCACCCGAGACTaGGGGAGCACGGTCACCCGT +
Preference number: 5 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSSSTRD*GSTVTR
Trigger: ACGGGTGACCGTGCTCCCCAAGTCTCGGGTGGAGCT...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGAGCTCCACCCGAGACTaGGGGAGCACGGTCACCCGT +
Preference number: 5 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRSSTRD*GSTVTR
Trigger: ACGGGTGACCGTGCTCCCCAAGTCTCGGGTGGAGCT...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACAGCAGTCCTGTCCCCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDSSPVP*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGGGGACAGGACTGCT...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAATGTCCAGATGGGCTTaGATTGCGGCGATGCCGGCC +
Preference number: 5 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSMSRWA*IAAMPA
Trigger: GGCCGGCATCGCCGCAATCAAAGCCCATCTGGACAT...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCATGGCTCTGCTGCGGTaGGAGCGCTCCACCAGGATG +
Preference number: 5 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIMALLR*ERSTRM
Trigger: CATCCTGGTGGAGCGCTCCAACCGCAGCAGAGCCAT...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGAGCAGTCCTGTCCCCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRSSPVP*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGGGGACAGGACTGCT...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCCCGGGGCTGAGTGCTaGGCAGCCACATTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: REHRPCGSESVGGAALASPGAEC*AATFVL
Trigger: CAACACAAATGTGGCTGCCAAGCACTCAGCCCCGGG...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACATGTCCAGATGGGCTTaGATTGCGGCGATGCCGGCC +
Preference number: 5 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHMSRWA*IAAMPA
Trigger: GGCCGGCATCGCCGCAATCAAAGCCCATCTGGACAT...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGCACCCTTCAGAACTGTaGTTAGCTGAGGGGGTCGTG +
Preference number: 5 (lower is better)
Translates to: EHRPCGSESVGGAALASLHPSEL*LAEGVV
Trigger: CACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTG...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGTGTAATTCCAGTACTTaGGGAGGGAAGGTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGCNSST*GGKVGG
Trigger: TCCACCCACCTTCCCTCCCAAAGTACTGGAATTACA...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACCCCGGGGCTGAGTGCTaGGCAGCCACATTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHPGAEC*AATFVL
Trigger: CAACACAAATGTGGCTGCCAAGCACTCAGCCCCGGG...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACCCCAGGGCTGAGTGCTaGGCAGCCACATTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDPRAEC*AATFVL
Trigger: CAACACAAATGTGGCTGCCAAGCACTCAGCCCTGGG...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000383226.4
CDS-3UTR CAA 90 bp ATCTTGATTTCTGCTCTAACTACACAGGGCTGGGATGGACACCTGCTCCAAGTTATGGCTCTGCTGCGGTaGGAGCGCTCCACCAGGATG +
Preference number: 5 (lower is better)
Translates to: ILISALTTQGWDGHLLQVMALLR*ERSTRM
Trigger: CATCCTGGTGGAGCGCTCCAACCGCAGCAGAGCCAT...AACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAGTTAGAGCAGAAATCAAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383226.4
CDS-3UTR CAA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTACCCGTGGAGGCACGTaGATGGCTCTGCTGCGGTTG +
Preference number: 5 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFTRGGT*MALLRL
Trigger: CAACCGCAGCAGAGCCATCAACGTGCCTCCACGGGT...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGCTGCCAGCCAGAGCTTaGGGTAGAGCAAGAATGTGT +
Preference number: 5 (lower is better)
Translates to: EHRPCGSESVGGAALASLLPARA*GRARMC
Trigger: ACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCAG...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCACCCTTCAGAACTGTaGTTAGCTGAGGGGGTCGTG +
Preference number: 5 (lower is better)
Translates to: REHRPCGSESVGGAALASHPSEL*LAEGVV
Trigger: CACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTG...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTAGCAGTCCTGTCCCCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFSSPVP*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGGGGACAGGACTGCT...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAAGGCAGGAGAATGGCTaGAACTCAGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSRQENG*NSGGGG
Trigger: ACCTCCACCTCCTGAGTTCAAGCCATTCTCCTGCCT...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR CAA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCAAGGCAGGAGAATGGCTaGAACTCAGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSRQENG*NSGGGG
Trigger: ACCTCCACCTCCTGAGTTCAAGCCATTCTCCTGCCT...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACAGGCAGGAGAATGGCTaGAACTCAGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDRQENG*NSGGGG
Trigger: ACCTCCACCTCCTGAGTTCAAGCCATTCTCCTGCCT...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACAGTCCACCTCAGACCTaGGGGATCCCCCTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHSPPQT*GIPLSH
Trigger: ATGGGAAAGGGGGATCCCCAAGGTCTGAGGTGGACT...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGCTCTTACGAGATACCTaGCAGACCGACTCTACCACC +
Preference number: 5 (lower is better)
Translates to: EHRPCGSESVGGAALASLLLRDT*QTDSTT
Trigger: GGTGGTAGAGTCGGTCTGCAAGGTATCTCGTAAGAG...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTATGGCTCTGCTGCGGTaGGAGCGCTCCACCAGGATG +
Preference number: 5 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFMALLR*ERSTRM
Trigger: CATCCTGGTGGAGCGCTCCAACCGCAGCAGAGCCAT...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATACCCGTGGAGGCACGTaGATGGCTCTGCTGCGGTTG +
Preference number: 5 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNTRGGT*MALLRL
Trigger: CAACCGCAGCAGAGCCATCAACGTGCCTCCACGGGT...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTACCCGTGGAGGCACGTaGATGGCTCTGCTGCGGTTG +
Preference number: 5 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFTRGGT*MALLRL
Trigger: CAACCGCAGCAGAGCCATCAACGTGCCTCCACGGGT...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGAGCTCCACCCGAGACTaGGGGAGCACGGTCACCCGT +
Preference number: 5 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLSSTRD*GSTVTR
Trigger: ACGGGTGACCGTGCTCCCCAAGTCTCGGGTGGAGCT...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACCTGCCAGCCAGAGCTTaGGGTAGAGCAAGAATGTGT +
Preference number: 5 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDLPARA*GRARMC
Trigger: ACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCAG...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCCACCCTTCAGAACTGTaGTTAGCTGAGGGGGTCGTG +
Preference number: 5 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIHPSEL*LAEGVV
Trigger: CACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTG...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACCACCCTTCAGAACTGTaGTTAGCTGAGGGGGTCGTG +
Preference number: 5 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHHPSEL*LAEGVV
Trigger: CACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTG...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACAGGCAGGAGAATGGCTaGAACTCAGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHRQENG*NSGGGG
Trigger: ACCTCCACCTCCTGAGTTCAAGCCATTCTCCTGCCT...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCCCGGGGCTGAGTGCTaGGCAGCCACATTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFPGAEC*AATFVL
Trigger: CAACACAAATGTGGCTGCCAAGCACTCAGCCCCGGG...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGAGCAGAGATCAGAGATaGTTGGGTACACACGTATCT +
Preference number: 5 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGSRDQR*LGTHVS
Trigger: AGATACGTGTGTACCCAACAATCTCTGATCTCTGCT...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCACTCTTACGAGATACCTaGCAGACCGACTCTACCACC +
Preference number: 5 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSLLRDT*QTDSTT
Trigger: GGTGGTAGAGTCGGTCTGCAAGGTATCTCGTAAGAG...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGCTGCCAGCCAGAGCTTaGGGTAGAGCAAGAATGTGT +
Preference number: 5 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRLPARA*GRARMC
Trigger: ACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCAG...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCACACCTTATCCAAGCCTaGGGCCTCTCTTTATCATGC +
Preference number: 5 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSHLIQA*GLSLSC
Trigger: GCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGTG...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCATGTAATTCCAGTACTTaGGGAGGGAAGGTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSCNSST*GGKVGG
Trigger: TCCACCCACCTTCCCTCCCAAAGTACTGGAATTACA...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCATGTAATTCCAGTACTTaGGGAGGGAAGGTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSCNSST*GGKVGG
Trigger: TCCACCCACCTTCCCTCCCAAAGTACTGGAATTACA...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR CAA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGGATGGTTTCCACCTCTaGGCCTCAAGCAGTTCTGTC +
Preference number: 5 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRDGFHL*ASSSSV
Trigger: GACAGAACTGCTTGAGGCCAAGAGGTGGAAACCATC...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426685.2
CDS-3UTR CAA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACCACCTTATCCAAGCCTaGGGCCTCTCTTTATCATGC +
Preference number: 5 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHHLIQA*GLSLSC
Trigger: GCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGTG...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CAGCACCCTTCAGAACTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCCACCTTATCCAAGCCTaGGGCCTCTCTTTATCATGC +
Preference number: 5 (lower is better)
Translates to: QHPSELLLAEGVVRNRIIHLIQA*GLSLSC
Trigger: GCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGTG...GATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTGCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGCACCTTATCCAAGCCTaGGGCCTCTCTTTATCATGC +
Preference number: 5 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRHLIQA*GLSLSC
Trigger: GCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGTG...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCGATGGTTTCCACCTCTaGGCCTCAAGCAGTCCTGTC +
Preference number: 5 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFDGFHL*ASSSPV
Trigger: GACAGGACTGCTTGAGGCCAAGAGGTGGAAACCATC...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp ATCTTGATTTCTGCTCTAACTACACAGGGCTGGGATGGACACCTGCTCCAAGTTGATGGTTTCCACCTCTaGGCCTCAAGCAGTCCTGTC +
Preference number: 5 (lower is better)
Translates to: ILISALTTQGWDGHLLQVDGFHL*ASSSPV
Trigger: GACAGGACTGCTTGAGGCCAAGAGGTGGAAACCATC...AACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAGTTAGAGCAGAAATCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000383226.4
CDS-3UTR CAA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTAGGCAGGAGAATGGCTaGAACTCAGGAGGTGGAGGT +
Preference number: 5 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFRQENG*NSGGGG
Trigger: ACCTCCACCTCCTGAGTTCAAGCCATTCTCCTGCCT...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGTGTAATTCCAGTACTTaGGGAGGGAAGGTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRCNSST*GGKVGG
Trigger: TCCACCCACCTTCCCTCCCAAAGTACTGGAATTACA...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp GGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCAGTAATAGTCCACCTCAGACCTaGGGGATCCCCCTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: GWDGHLLQVWPVIYFSSNSPPQT*GIPLSH
Trigger: ATGGGAAAGGGGGATCCCCAAGGTCTGAGGTGGACT...ATTACTGGAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTAGTCCACCTCAGACCTaGGGGATCCCCCTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFSPPQT*GIPLSH
Trigger: ATGGGAAAGGGGGATCCCCAAGGTCTGAGGTGGACT...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGGTTCAAACCCTCATTTaGCCTCTATTTACTTGTACC +
Preference number: 5 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGVQTLI*PLFTCT
Trigger: GGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAAC...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGCCCGGGGCTGAGTGCTaGGCAGCCACATTTGTGTTG +
Preference number: 5 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLPGAEC*AATFVL
Trigger: CAACACAAATGTGGCTGCCAAGCACTCAGCCCCGGG...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGAGCAGAGATCAGAGATaGTTGGGTACACACGTATCT +
Preference number: 5 (lower is better)
Translates to: EHRPCGSESVGGAALASLSRDQR*LGTHVS
Trigger: AGATACGTGTGTACCCAACAATCTCTGATCTCTGCT...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGAGCAGTTCTGTCCCCTaGGCCTCCCAAAGTGCTGGG +
Preference number: 5 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLSSSVP*ASQSAG
Trigger: CCCAGCACTTTGGGAGGCCAAGGGGACAGAACTGCT...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426685.2
CDS-3UTR CAA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGACCCGTGGAGGCACGTaGATGGCTCTGCTGCGGTTG +
Preference number: 5 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMTRGGT*MALLRL
Trigger: CAACCGCAGCAGAGCCATCAACGTGCCTCCACGGGT...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCTGCCAGCCAGAGCTTaGGGTAGAGCAAGAATGTGT +
Preference number: 5 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFLPARA*GRARMC
Trigger: ACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCAG...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTGATGGTTTCCACCTCTaGGCCTCAAGCAGTCCTGTC +
Preference number: 5 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFDGFHL*ASSSPV
Trigger: GACAGGACTGCTTGAGGCCAAGAGGTGGAAACCATC...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACCTCTTAAGAAGCCCATaGAGTCCCCATAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDLLRSP*SPHNLL
Trigger: CAAGAGATTATGGGGACTCAATGGGCTTCTTAAGAG...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCCACTCAAAGTCAGCACAGCGGGATGCACTTAAAGGGCACTGAGCACGCAGGGATTTGTGTTGAGATCTaGATTCCTGCTCTAACTACA +
Preference number: 5 (lower is better)
Translates to: PTQSQHSGMHLKGTEHAGICVEI*IPALTT
Trigger: TGTAGTTAGAGCAGGAATCAAGATCTCAACACAAAT...CCCTGCGTGCTCAGTGCCCTTTAAGTGCATCCCGCTGTGCTGACTTTGAGTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp AGAGAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTAGCAGAGATCAGAGATaGTTGGGTACACACGTATCT +
Preference number: 5 (lower is better)
Translates to: REHRPCGSESVGGAALASSRDQR*LGTHVS
Trigger: AGATACGTGTGTACCCAACAATCTCTGATCTCTGCT...AGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCCTCTTACGAGATACCTaGCAGACCGACTCTACCACC +
Preference number: 5 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFLLRDT*QTDSTT
Trigger: GGTGGTAGAGTCGGTCTGCAAGGTATCTCGTAAGAG...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGATGTCCAGATGGGCTTaGATTGCGGCGATGCCGGCC +
Preference number: 5 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMMSRWA*IAAMPA
Trigger: GGCCGGCATCGCCGCAATCAAAGCCCATCTGGACAT...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATATGGCTCTGCTGCGGTaGGAGCGCTCCACCAGGATG +
Preference number: 5 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHMALLR*ERSTRM
Trigger: CATCCTGGTGGAGCGCTCCAACCGCAGCAGAGCCAT...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGCACCCTTCAGAACTGTaGTTAGCTGAGGGGGTCGTG +
Preference number: 5 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLHPSEL*LAEGVV
Trigger: CACGACCCCCTCAGCTAACAACAGTTCTGAAGGGTG...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCACCTTATCCAAGCCTaGGGCCTCTCTTTATCATGC +
Preference number: 5 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFHLIQA*GLSLSC
Trigger: GCATGATAAAGAGAGGCCCAAGGCTTGGATAAGGTG...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTTGTAATTCCAGTACTTaGGGAGGGAAGGTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFCNSST*GGKVGG
Trigger: TCCACCCACCTTCCCTCCCAAAGTACTGGAATTACA...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGCTCTTAAGAAGCCCATaGAGTCCCCATAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRLLRSP*SPHNLL
Trigger: CAAGAGATTATGGGGACTCAATGGGCTTCTTAAGAG...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACAGAGATCAGAGATTGTaGGGTACACACGTATCTTGT +
Preference number: 5 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDRDQRL*GTHVSC
Trigger: ACAAGATACGTGTGTACCCAACAATCTCTGATCTCT...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACAGCAGAGATCAGAGATaGTTGGGTACACACGTATCT +
Preference number: 5 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHSRDQR*LGTHVS
Trigger: AGATACGTGTGTACCCAACAATCTCTGATCTCTGCT...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATATGTCCAGATGGGCTTaGATTGCGGCGATGCCGGCC +
Preference number: 5 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHMSRWA*IAAMPA
Trigger: GGCCGGCATCGCCGCAATCAAAGCCCATCTGGACAT...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTTGTAATTCCAGTACTTaGGGAGGGAAGGTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFCNSST*GGKVGG
Trigger: TCCACCCACCTTCCCTCCCAAAGTACTGGAATTACA...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGAGTCCACCTCAGACCTaGGGGATCCCCCTTTCCCAT +
Preference number: 5 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMSPPQT*GIPLSH
Trigger: ATGGGAAAGGGGGATCCCCAAGGTCTGAGGTGGACT...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTTTGCCTCTATTTACTaGTACCTTGATTGGCTGATG +
Preference number: 5 (lower is better)
Translates to: CCCPLHSRDSNSVGLGDDFASIY*YLDWLM
Trigger: CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAA...GTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp GACTCCACTGAGGGAAGTGGCCACCTTATCCAAGCCTTGGGCCTCTCTTTATCATTTGCCTCTATTTACTaGTACCTTGATTGGCTGATG +
Preference number: 5 (lower is better)
Translates to: DSTEGSGHLIQALGLSLSFASIY*YLDWLM
Trigger: CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAA...TGATAAAGAGAGGCCCAAGGCTTGGATAAGGTGGCCACTTCCCTCAGTGGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCATTTGCCTCTATTTACTaGTACCTTGATTGGCTGATG +
Preference number: 5 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSFASIY*YLDWLM
Trigger: CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAA...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR CAA 90 bp CAGAAAAGACAGCCTCCCTGTTGCTGCCCCCTGCACTCCCGAGATTCTAATTCAGTTCAAACCCTCATTTaGCCTCTATTTACTTGTACC +
Preference number: 5 (lower is better)
Translates to: QKRQPPCCCPLHSRDSNSVQTLI*PLFTCT
Trigger: GGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAAC...TGAATTAGAATCTCGGGAGTGCAGGGGGCAGCAACAGGGAGGCTGTCTTTTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000434335.2
ENST00000438987.2
CDS-3UTR CAA 90 bp GAACACAGACCATGTGGATCCGAGAGTGTTGGAGGGGCAGCTCTAGCTTCTCTGATTTGTGTTGAGATCTaGATTCCTGCTCTAACTACA +
Preference number: 5 (lower is better)
Translates to: EHRPCGSESVGGAALASLICVEI*IPALTT
Trigger: TGTAGTTAGAGCAGGAATCAAGATCTCAACACAAAT...CAGAGAAGCTAGAGCTGCCCCTCCAACACTCTCGGATCCACATGGTCTGTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGAGAGATCAGAGATTGTaGGGTACACACGTATCTTGT +
Preference number: 5 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRRDQRL*GTHVSC
Trigger: ACAAGATACGTGTGTACCCAACAATCTCTGATCTCT...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACAGAGATCAGAGATTGTaGGGTACACACGTATCTTGT +
Preference number: 5 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHRDQRL*GTHVSC
Trigger: ACAAGATACGTGTGTACCCAACAATCTCTGATCTCT...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGCTCTTACGAGATACCTaGCAGACCGACTCTACCACC +
Preference number: 5 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLLLRDT*QTDSTT
Trigger: GGTGGTAGAGTCGGTCTGCAAGGTATCTCGTAAGAG...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGGATGGTTTCCACCTCTaGGCCTCAAGCAGTCCTGTC +
Preference number: 5 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMDGFHL*ASSSPV
Trigger: GACAGGACTGCTTGAGGCCAAGAGGTGGAAACCATC...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp ATGGGGTCTCTCTATGTAGCCCAAGATGGTTTCCACCTCTTGGCCTCAAGCAGTTTTGCCTCTATTTACTaGTACCTTGATTGGCTGATG +
Preference number: 5 (lower is better)
Translates to: MGSLYVAQDGFHLLASSSFASIY*YLDWLM
Trigger: CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAA...ACTGCTTGAGGCCAAGAGGTGGAAACCATCTTGGGCTACATAGAGAGACCCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TGTCGGGTGGACATGTTCACTGAGAAGGACAGTCAGTCCACAGAGAGAGAACACGTTCAAACCCTCATTTaGCCTCTATTTACTTGTACC +
Preference number: 5 (lower is better)
Translates to: CRVDMFTEKDSQSTEREHVQTLI*PLFTCT
Trigger: GGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAAC...GTGTTCTCTCTCTGTGGACTGACTGTCCTTCTCAGTGAACATGTCCACCCGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCTCTTAAGAAGCCCATaGAGTCCCCATAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFLLRSP*SPHNLL
Trigger: CAAGAGATTATGGGGACTCAATGGGCTTCTTAAGAG...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTAGCAGAGATCAGAGATaGTTGGGTACACACGTATCT +
Preference number: 5 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFSRDQR*LGTHVS
Trigger: AGATACGTGTGTACCCAACAATCTCTGATCTCTGCT...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTCTCTTAAGAAGCCCATaGAGTCCCCATAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFLLRSP*SPHNLL
Trigger: CAAGAGATTATGGGGACTCAATGGGCTTCTTAAGAG...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CTGTTGTTAGCTGAGGGGGTCGTGAGGAACAGGATAATCTGCATCCCTTTCAGGATTTGTGTTGAGATCTaGATTCCTGCTCTAACTACA +
Preference number: 5 (lower is better)
Translates to: LLLAEGVVRNRIICIPFRICVEI*IPALTT
Trigger: TGTAGTTAGAGCAGGAATCAAGATCTCAACACAAAT...CCTGAAAGGGATGCAGATTATCCTGTTCCTCACGACCCCCTCAGCTAACAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATCTGCCAGCCAGAGCTTaGGGTAGAGCAAGAATGTGT +
Preference number: 5 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHLPARA*GRARMC
Trigger: ACACATTCTTGCTCTACCCAAAGCTCTGGCTGGCAG...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp TACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTCGTTCAAACCCTCATTTaGCCTCTATTTACTTGTACC +
Preference number: 5 (lower is better)
Translates to: YTGLGWTPAPSLASHLFFVQTLI*PLFTCT
Trigger: GGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAAC...GAAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTAGAGATCAGAGATTGTaGGGTACACACGTATCTTGT +
Preference number: 5 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFRDQRL*GTHVSC
Trigger: ACAAGATACGTGTGTACCCAACAATCTCTGATCTCT...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATTGTAATTCCAGTACTTaGGGAGGGAAGGTGGGTGGA +
Preference number: 5 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHCNSST*GGKVGG
Trigger: TCCACCCACCTTCCCTCCCAAAGTACTGGAATTACA...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCCCTGCACTCCCGAGATTCTAATTCAGTAGGTCTGGGTGATGACTGTTATTTTGTTCAAACCCTCATTTaGCCTCTATTTACTTGTACC +
Preference number: 5 (lower is better)
Translates to: PLHSRDSNSVGLGDDCYFVQTLI*PLFTCT
Trigger: GGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAAC...AAAATAACAGTCATCACCCAGACCTACTGAATTAGAATCTCGGGAGTGCAGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CTACACAGGGCTGGGATGGACACCTGCTCCAAGTTTGGCCAGTCATTTATTTTTATTTGTGTTGAGATCTaGATTCCTGCTCTAACTACA +
Preference number: 5 (lower is better)
Translates to: LHRAGMDTCSKFGQSFIFICVEI*IPALTT
Trigger: TGTAGTTAGAGCAGGAATCAAGATCTCAACACAAAT...AAAAATAAATGACTGGCCAAACTTGGAGCAGGTGTCCATCCCAGCCCTGTGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp GCATGTGATCACACAAAGAGGGTTTCTGTTACTGGCACACAAAAAGTTTGCCTGAGAGATCAGAGATTGTaGGGTACACACGTATCTTGT +
Preference number: 5 (lower is better)
Translates to: ACDHTKRVSVTGTQKVCLRDQRL*GTHVSC
Trigger: ACAAGATACGTGTGTACCCAACAATCTCTGATCTCT...CAGGCAAACTTTTTGTGTGCCAGTAACAGAAACCCTCTTTGTGTGATCACATGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGCTCTTAAGAAGCCCATaGAGTCCCCATAATCTCTTG +
Preference number: 5 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMLLRSP*SPHNLL
Trigger: CAAGAGATTATGGGGACTCAATGGGCTTCTTAAGAG...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGTTTGCCTCTATTTACTaGTACCTTGATTGGCTGATG +
Preference number: 5 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMFASIY*YLDWLM
Trigger: CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAA...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CACAGTTCAAACCCTCATTTTGCCTCTATTTACTTGTACCTTGATTGGCTGATGGTTCAAACCCTCATTTaGCCTCTATTTACTTGTACC +
Preference number: 5 (lower is better)
Translates to: HSSNPHFASIYLYLDWLMVQTLI*PLFTCT
Trigger: GGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAAC...CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAAATGAGGGTTTGAACTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATTTTGCCTCTATTTACTaGTACCTTGATTGGCTGATG +
Preference number: 5 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHFASIY*YLDWLM
Trigger: CATCAGCCAATCAAGGTACAAGTAAATAGAGGCAAA...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS-3UTR CAA 90 bp CCAAGCAGTTCTTATGTGCATTCTGGTTTGAAAACCGTAATCTGTATTGCTCATATTTGTGTTGAGATCTaGATTCCTGCTCTAACTACA +
Preference number: 5 (lower is better)
Translates to: PSSSYVHSGLKTVICIAHICVEI*IPALTT
Trigger: TGTAGTTAGAGCAGGAATCAAGATCTCAACACAAAT...ATGAGCAATACAGATTACGGTTTTCAAACCAGAATGCACATAAGAACTGCTTGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000229829.7
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS GCA 72 bp GCGGCGATGCCGGCCAGCCCGCCCCTTGGTGGCCCCTaGCTCCTGCGGGCTCAGGAGGGTCATCAGGGTGTG +
Preference number: 6 (lower is better)
Translates to: AAMPASPPLGGP*LLRAQEGHQGV
Trigger: CACACCCTGATGACCCTCCTGAGCCCGCAGGAGGCAGGGGCCACCAAGGGGCGGGCTGGCCGGCATCGCCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000374813.1
ENST00000383225.2
ENST00000418857.1
ENST00000444109.1
ENST00000457663.1
CDS GCA 72 bp GCGGCGATGCCGGCCAGCCCACCCCTTGGTGGCCCCTaGCTCCTGCGGGCTCAGGAGGGTCATCAGGGTGTG +
Preference number: 6 (lower is better)
Translates to: AAMPASPPLGGP*LLRAQEGHQGV
Trigger: CACACCCTGATGACCCTCCTGAGCCCGCAGGAGGCAGGGGCCACCAAGGGGTGGGCTGGCCGGCATCGCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000416763.1
ENST00000455325.1
CDS GCA 72 bp TCCGTAGGAGCCCATGTGGTCAGCCTTGGTGGCCCCTaGCTCCTGCGGGCTCAGGAGGGTCATCAGGGTGTG +
Preference number: 6 (lower is better)
Translates to: SVGAHVVSLGGP*LLRAQEGHQGV
Trigger: CACACCCTGATGACCCTCCTGAGCCCGCAGGAGGCAGGGGCCACCAAGGCTGACCACATGGGCTCCTACGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000229829.7
ENST00000383226.4
ENST00000426070.2
ENST00000426685.2
ENST00000434335.2
ENST00000438987.2
ENST00000452598.2
CDS GCA 72 bp GTCCGGGTGAGAGGTGTCATTCCTCAAGGAGAGGGGTaGCAAAGGGGTCTGGGAAGACCTGGAGCCTCCGTT +
Preference number: 6 (lower is better)
Translates to: VRVRGVIPQGEG*QRGLGRPGASV
Trigger: AACGGAGGCTCCAGGTCTTCCCAGACCCCTTTGGCACCCCTCTCCTTGAGGAATGACACCTCTCACCCGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000465107.1
ENST00000466497.1
ENST00000468742.1
ENST00000474779.1
ENST00000477987.1
ENST00000489297.1
ENST00000495532.1
CDS CAA 72 bp GAAGACCTGGAGCCTCCGTTGATGGCTCTGCTGCGGTaGGAGCGCTCCACCAGGATGTCCAGATGGGCTTTG +
Preference number: 6 (lower is better)
Translates to: EDLEPPLMALLR*ERSTRMSRWAL
Trigger: CAAAGCCCATCTGGACATCCTGGTGGAGCGCTCCAACCGCAGCAGAGCCATCAACGGAGGCTCCAGGTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000465107.1
ENST00000466497.1
ENST00000468742.1
ENST00000474779.1
ENST00000477987.1
ENST00000489297.1
ENST00000495532.1
CDS CCA 72 bp GTGTCATTCCTCAAGGAGAGGGGTGCCAAAGGGGTCTaGGAAGACCTGGAGCCTCCGTTGATGGCTCTGCTG +
Preference number: 6 (lower is better)
Translates to: VSFLKERGAKGV*EDLEPPLMALL
Trigger: CAGCAGAGCCATCAACGGAGGCTCCAGGTCTTCCCAGACCCCTTTGGCACCCCTCTCCTTGAGGAATGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000465107.1
ENST00000466497.1
ENST00000468742.1
ENST00000474779.1
ENST00000477987.1
ENST00000489297.1
ENST00000495532.1