Pregenerated sensors for HK2-DT (Homo sapiens)
Ensembl gene IDs: ENSG00000272711Ensembl transcript IDs: ENST00000610008.1
Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | CTAGGATGCTTTAGACGTGTGACTGGGCAGTGGGAGCCCCTCACATaGTCCCGAGATGCCAGACAGTGTCTCTCCGCACAGGGCGTGTGC | + |
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Preference number: 5 (lower is better) Translates to: LGCFRRVTGQWEPLT*SRDARQCLSAQGVC Trigger: GCACACGCCCTGTGCGGAGAGACACTGTCTGGCATCTCGGGATCATGTGAGGGGCTCCCACTGCCCAGTCACACGTCTAAAGCATCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610008.1 |
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| CDS CCA 90 bp | AGTCCCAGAGCTGCAGAGATGCTCTTTTTCTACCTCCTACTTCTCTaGCTCTTAGAGAGGCAGCATGGGATAATGGGGCAAGCGAATAGG | + |
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Preference number: 5 (lower is better) Translates to: SPRAAEMLFFYLLLL*LLERQHGIMGQANR Trigger: CCTATTCGCTTGCCCCATTATCCCATGCTGCCTCTCTAAGAGCCAGAGAAGTAGGAGGTAGAAAAAGAGCATCTCTGCAGCTCTGGGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000610008.1 |
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| CDS CCA 90 bp | TATTTCATTCTTGCCAGTTTCCACTGTGTGTTTAAATTTGGAGTCTaGTGTCTAGCATTAGCTGGGGTTGGAGCTTCCACTCCTCTCAGC | + |
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Preference number: 5 (lower is better) Translates to: YFILASFHCVFKFGV*CLALAGVGASTPLS Trigger: GCTGAGAGGAGTGGAAGCTCCAACCCCAGCTAATGCTAGACACCAGACTCCAAATTTAAACACACAGTGGAAACTGGCAAGAATGAAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610008.1 |
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| CDS GCA 72 bp | CGAGATGCCAGACAGTGTCTCTCCGCACAGGGCGTGTaGTGGTCCAGAGGCCCGTTTTTCCAGTCGCCCCAC | + |
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Preference number: 6 (lower is better) Translates to: RDARQCLSAQGV*WSRGPFFQSPH Trigger: GTGGGGCGACTGGAAAAACGGGCCTCTGGACCAGCACACGCCCTGTGCGGAGAGACACTGTCTGGCATCTCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000610008.1 |
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| CDS GCA 72 bp | GACTGGGCAGTGGGAGCCCCTCACATGATCCCGAGATaGCAGACAGTGTCTCTCCGCACAGGGCGTGTGCTG | + |
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Preference number: 6 (lower is better) Translates to: DWAVGAPHMIPR*QTVSLRTGRVL Trigger: CAGCACACGCCCTGTGCGGAGAGACACTGTCTGGCATCTCGGGATCATGTGAGGGGCTCCCACTGCCCAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610008.1 |
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| CDS CCA 72 bp | GATGCCAGACAGTGTCTCTCCGCACAGGGCGTGTGCTaGTCCAGAGGCCCGTTTTTCCAGTCGCCCCACACC | + |
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Preference number: 6 (lower is better) Translates to: DARQCLSAQGVC*SRGPFFQSPHT Trigger: GGTGTGGGGCGACTGGAAAAACGGGCCTCTGGACCAGCACACGCCCTGTGCGGAGAGACACTGTCTGGCATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000610008.1 |
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| CDS TCA 72 bp | TTTAGACGTGTGACTGGGCAGTGGGAGCCCCTCACATaGTCCCGAGATGCCAGACAGTGTCTCTCCGCACAG | + |
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Preference number: 6 (lower is better) Translates to: FRRVTGQWEPLT*SRDARQCLSAQ Trigger: CTGTGCGGAGAGACACTGTCTGGCATCTCGGGATCATGTGAGGGGCTCCCACTGCCCAGTCACACGTCTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610008.1 |
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| CDS CAA 72 bp | CCTATCAGTGGTTTTGAGGATGGGCCGACTCTTGTATaGCCTGCTCTAGTACAATCAGCAGCTAAGGCGGCT | + |
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Preference number: 6 (lower is better) Translates to: PISGFEDGPTLV*PALVQSAAKAA Trigger: AGCCGCCTTAGCTGCTGATTGTACTAGAGCAGGCAATACAAGAGTCGGCCCATCCTCAAAACCACTGATAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610008.1 |
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| CDS CAA 90 bp | AACTCACATCCTATCAGTGGTTTTGAGGATGGGCCGACTCTTGTATaGCCTGCTCTAGTACAATCAGCAGCTAAGGCGGCTCACTTTCCG | + |
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Preference number: 6 (lower is better) Translates to: NSHPISGFEDGPTLV*PALVQSAAKAAHFP Trigger: CGGAAAGTGAGCCGCCTTAGCTGCTGATTGTACTAGAGCAGGCAATACAAGAGTCGGCCCATCCTCAAAACCACTGATAGGATGTGAGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610008.1 |
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| CDS CCA 72 bp | GCTGCAGAGATGCTCTTTTTCTACCTCCTACTTCTCTaGCTCTTAGAGAGGCAGCATGGGATAATGGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: AAEMLFFYLLLL*LLERQHGIMGQ Trigger: TTGCCCCATTATCCCATGCTGCCTCTCTAAGAGCCAGAGAAGTAGGAGGTAGAAAAAGAGCATCTCTGCAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000610008.1 |
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| CDS TCA 72 bp | ACGGGGTTAGTGAAACTCACATCCTATCAGTGGTTTTaGGGATGGGCCGACTCTTGTATTGCCTGCTCTAGT | + |
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Preference number: 6 (lower is better) Translates to: TGLVKLTSYQWF*GWADSCIACSS Trigger: ACTAGAGCAGGCAATACAAGAGTCGGCCCATCCTCAAAACCACTGATAGGATGTGAGTTTCACTAACCCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000610008.1 |
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| CDS TCA 72 bp | CTCAGTAGAACATGGCAGACCTTCATCTTCCTTCCCTaGACCTTTTCCAACCTTAGGCTTGCCATTCTCCAC | + |
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Preference number: 6 (lower is better) Translates to: LSRTWQTFIFLP*TFSNLRLAILH Trigger: GTGGAGAATGGCAAGCCTAAGGTTGGAAAAGGTTCAGGGAAGGAAGATGAAGGTCTGCCATGTTCTACTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610008.1 |
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| CDS CAA 90 bp | GGCAGACCTTCATCTTCCTTCCCTGAACCTTTTCCAACCTTAGGCTaGCCATTCTCCACCAGTGCTAATGTCATGTCTCTTGAAATCTGT | + |
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Preference number: 6 (lower is better) Translates to: GRPSSSFPEPFPTLG*PFSTSANVMSLEIC Trigger: ACAGATTTCAAGAGACATGACATTAGCACTGGTGGAGAATGGCAAGCCTAAGGTTGGAAAAGGTTCAGGGAAGGAAGATGAAGGTCTGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610008.1 |
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| CDS CCA 72 bp | CTTGCCAGTTTCCACTGTGTGTTTAAATTTGGAGTCTaGTGTCTAGCATTAGCTGGGGTTGGAGCTTCCACT | + |
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Preference number: 6 (lower is better) Translates to: LASFHCVFKFGV*CLALAGVGAST Trigger: AGTGGAAGCTCCAACCCCAGCTAATGCTAGACACCAGACTCCAAATTTAAACACACAGTGGAAACTGGCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000610008.1 |
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| CDS CAA 72 bp | CCACCAGTGCTAATGTCATGTCTCTTGAAATCTGTATaGAAGTCAGTATTTCATTCTTGCCAGTTTCCACTG | + |
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Preference number: 6 (lower is better) Translates to: PPVLMSCLLKSV*KSVFHSCQFPL Trigger: CAGTGGAAACTGGCAAGAATGAAATACTGACTTCAATACAGATTTCAAGAGACATGACATTAGCACTGGTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000610008.1 |
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