RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HIVEP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000127124

Ensembl transcript IDs: ENST00000372583.6, ENST00000372584.5, ENST00000460604.1, ENST00000479350.1, ENST00000489103.5, ENST00000491442.5, ENST00000643665.1

Found 2219 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCTGCTGTCGGGCTCCTGGAGGGTTGCAGGGGTTGAGCCCAGAGTaGGAGCCACAGGTGCGGGCGGGAGCAGAGAGGAGTGGGGTTACT +
Preference number: 1 (lower is better)
Translates to: GCCRAPGGLQGLSPE*EPQVRAGAERSGVT
Trigger: AGTAACCCCACTCCTCTCTGCTCCCGCCCGCACCTGTGGCTCTCACTCTGGGCTCAACCCCTGCAACCCTCCAGGAGCCCGACAGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 90 bp GGGGTGCGTGGGTGGGGTGGCCTGCCCACCTGTGGAGTGCCAGGATaGGCCCATGACTCAGACTACCAGAGTATCCAGGAGCCCTTGGGG +
Preference number: 1 (lower is better)
Translates to: GVRGWGGLPTCGVPG*AHDSDYQSIQEPLG
Trigger: CCCCAAGGGCTCCTGGATACTCTGGTAGTCTGAGTCATGGGCCCATCCTGGCACTCCACAGGTGGGCAGGCCACCCCACCCACGCACCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR TCA 90 bp GCCCAGAGGAGGGCGTGCATGGGGCGAGCGTCTTTCTCCAAATCATaGAGGTGTACCTGTGGGCTGGGGGCTCTGTGCGCAGAGGAGCGG +
Preference number: 1 (lower is better)
Translates to: AQRRACMGRASFSKS*RCTCGLGALCAEER
Trigger: CCGCTCCTCTGCGCACAGAGCCCCCAGCCCACAGGTACACCTTCATGATTTGGAGAAAGACGCTCGCCCCATGCACGCCCTCCTCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR GCA 90 bp ACTGCCGGGCCTCTGCCCTGCCGGCTGCACTGTTCATTGCTAGGCTaGCCAGGGAGGAAACCTTGGGTGGGTAGGCTGTTTGAGTACAGG +
Preference number: 1 (lower is better)
Translates to: TAGPLPCRLHCSLLG*PGRKPWVGRLFEYR
Trigger: CCTGTACTCAAACAGCCTACCCACCCAAGGTTTCCTCCCTGGGCAGCCTAGCAATGAACAGTGCAGCCGGCAGGGCAGAGGCCCGGCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 90 bp TGGGGCGAGCGTCTTTCTCCAAATCATGAAGGTGTACCTGTGGGCTaGGGGCTCTGTGCGCAGAGGAGCGGGACTAGAGTCCGGAGGAGG +
Preference number: 1 (lower is better)
Translates to: WGERLSPNHEGVPVG*GLCAQRSGTRVRRR
Trigger: CCTCCTCCGGACTCTAGTCCCGCTCCTCTGCGCACAGAGCCCCCAGCCCACAGGTACACCTTCATGATTTGGAGAAAGACGCTCGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR GCA 90 bp GCGCAGAGGAGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTaGCCAGTGACATATACCCAGGCTGGTGGCATTGGTTCTGTCCCT +
Preference number: 1 (lower is better)
Translates to: AQRSGTRVRRRGLEL*PVTYTQAGGIGSVP
Trigger: AGGGACAGAACCAATGCCACCAGCCTGGGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCTCCTCTGCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 90 bp TACCCCCATCATTTAGAAATAGTCTCCAGTGACTCCTGGCCCCTGTaGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCT +
Preference number: 1 (lower is better)
Translates to: YPHHLEIVSSDSWPL*LLCLSLTGPVTAGP
Trigger: AGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGGGGCCAGGAGTCACTGGAGACTATTTCTAAATGATGGGGGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR TCA 90 bp TGTGGGTGGTTTGGTGGTTTTAGAACAGAGGAGGCAACAGGAGAGTaGGGCCTCGGTCAGGGGCTTGGGAGCCAGGGACGGACAGTCAGG +
Preference number: 1 (lower is better)
Translates to: CGWFGGFRTEEATGE*GLGQGLGSQGRTVR
Trigger: CCTGACTGTCCGTCCCTGGCTCCCAAGCCCCTGACCGAGGCCTCACTCTCCTGTTGCCTCCTCTGTTCTAAAACCACCAAACCACCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 90 bp CCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCAGGCTaGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAG +
Preference number: 1 (lower is better)
Translates to: PEEGVRAVPSDIYPG*WHWFCPSGHGINVE
Trigger: CTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCCTGGGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 90 bp GGCCCTGAGATTGCCAAGGGTGAAAGGCATCGTGGAGCGCAGGCCTaGGGGGCAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAA +
Preference number: 1 (lower is better)
Translates to: GPEIAKGERHRGAQA*GARTHQPKARFGSE
Trigger: TTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTGCCCCCCAGGCCTGCGCTCCACGATGCCTTTCACCCTTGGCAATCTCAGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR GCA 90 bp ACCCAGTCTCAGGAACGGCCGCTAGGGCTCGGGCCCTGCCACTTCTaGCTTTGTGGGTGGTTTGGTGGTTTTAGAACAGAGGAGGCAACA +
Preference number: 1 (lower is better)
Translates to: TQSQERPLGLGPCHF*LCGWFGGFRTEEAT
Trigger: TGTTGCCTCCTCTGTTCTAAAACCACCAAACCACCCACAAAGGCAGAAGTGGCAGGGCCCGAGCCCTAGCGGCCGTTCCTGAGACTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR GCA 90 bp GCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTaGCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCC +
Preference number: 1 (lower is better)
Translates to: ARFGSETSTSWFLPH*PHPRTRTSLYRGMA
Trigger: GGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 90 bp GGGGTTAGAGCTGTGCCCAGTGACATATACCCAGGCTGGTGGCATTaGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCTT +
Preference number: 1 (lower is better)
Translates to: GVRAVPSDIYPGWWH*FCPSGHGINVEAAL
Trigger: AAGGGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCCTGGGTATATGTCACTGGGCACAGCTCTAACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 90 bp GAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCAGGCTGGTaGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCA +
Preference number: 1 (lower is better)
Translates to: EEGVRAVPSDIYPGW*HWFCPSGHGINVEA
Trigger: TGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCCTGGGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATaGACAGTGTGGTCCAGGCTGGGCTTGCTGCTTCTCTTGGGGAGG +
Preference number: 1 (lower is better)
Translates to: GTWRSHFLSGHCPAI*TVWSRLGLLLLLGR
Trigger: CCTCCCCAAGAGAAGCAGCAAGCCCAGCCTGGACCACACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 90 bp CAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCTTCCCCTaGTCACACGGCAGATCGGTCCCCAAGGACAGGTGCTCAGCCAGG +
Preference number: 1 (lower is better)
Translates to: QKQNWWNRLSGTFFP*SHGRSVPKDRCSAR
Trigger: CCTGGCTGAGCACCTGTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR GCA 90 bp AAACCCAAAACCCAGTCTCAGGAACGGCCGCTAGGGCTCGGGCCCTaGCACTTCTGCCTTTGTGGGTGGTTTGGTGGTTTTAGAACAGAG +
Preference number: 1 (lower is better)
Translates to: KPKTQSQERPLGLGP*HFCLCGWFGGFRTE
Trigger: CTCTGTTCTAAAACCACCAAACCACCCACAAAGGCAGAAGTGGCAGGGCCCGAGCCCTAGCGGCCGTTCCTGAGACTGGGTTTTGGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR GCA 90 bp AGAGCCCCCGGTCTGCTGCTTTGTAGGTCTGGGGCAGGAAGAGCTTaGCCAGGCAGATTTCTAACCTGGGCTGAAGCAATGCCCTTTATG +
Preference number: 1 (lower is better)
Translates to: RAPGLLLCRSGAGRA*PGRFLTWAEAMPFM
Trigger: CATAAAGGGCATTGCTTCAGCCCAGGTTAGAAATCTGCCTGGGCAAGCTCTTCCTGCCCCAGACCTACAAAGCAGCAGACCGGGGGCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 90 bp CCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAAGAGCCCTaGGGCAGGCACTTGATTCACACAGCCTGGCTGAGGACTGGGGAT +
Preference number: 1 (lower is better)
Translates to: PTVSCTQAASIAQEP*GRHLIHTAWLRTGD
Trigger: ATCCCCAGTCCTCAGCCAGGCTGTGTGAATCAAGTGCCTGCCCCAGGGCTCTTGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 90 bp TGTAGGTCTGGGGCAGGAAGAGCTTGCCCAGGCAGATTTCTAACCTaGGCTGAAGCAATGCCCTTTATGCAGCTCCCAGACCTCAGCCCT +
Preference number: 1 (lower is better)
Translates to: CRSGAGRACPGRFLT*AEAMPFMQLPDLSP
Trigger: AGGGCTGAGGTCTGGGAGCTGCATAAAGGGCATTGCTTCAGCCCAGGTTAGAAATCTGCCTGGGCAAGCTCTTCCTGCCCCAGACCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 90 bp TGCCGGCTGCACTGTTCATTGCTAGGCTGCCCAGGGAGGAAACCTTaGGTGGGTAGGCTGTTTGAGTACAGGGAGAAAAATGCCCAGGAG +
Preference number: 1 (lower is better)
Translates to: CRLHCSLLGCPGRKP*VGRLFEYREKNAQE
Trigger: CTCCTGGGCATTTTTCTCCCTGTACTCAAACAGCCTACCCACCCAAGGTTTCCTCCCTGGGCAGCCTAGCAATGAACAGTGCAGCCGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 90 bp TGGTTTGTCTGTCTAGTAGGGACCAAGCAGGGAAAGGCCACGAATTaGAAGAGGCAAGTACAGCCCCGCACAGGGAACTCACAGAAGGGT +
Preference number: 1 (lower is better)
Translates to: WFVCLVGTKQGKATN*KRQVQPRTGNSQKG
Trigger: ACCCTTCTGTGAGTTCCCTGTGCGGGGCTGTACTTGCCTCTTCCAATTCGTGGCCTTTCCCTGCTTGGTCCCTACTAGACAGACAAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 90 bp CAGGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTaGAGGCAGCCCTTTGGTGAGATTCTATTTGTGCATTTACCCCCA +
Preference number: 1 (lower is better)
Translates to: QAGGIGSVPLGTASM*RQPFGEILFVHLPP
Trigger: TGGGGGTAAATGCACAAATAGAATCTCACCAAAGGGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR TCA 90 bp ATTCTATTTGTGCATTTACCCCCATCATTTAGAAATAGTCTCCAGTaGCTCCTGGCCCCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCC +
Preference number: 1 (lower is better)
Translates to: ILFVHLPPSFRNSLQ*LLAPVASLPEPDGP
Trigger: GGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGGGGCCAGGAGTCACTGGAGACTATTTCTAAATGATGGGGGTAAATGCACAAATAGAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR TCA 90 bp CTTCTGTCTCATTTTTGTCTTAGCTCTGAGGCAAAGGAGAATGAGTaGACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTC +
Preference number: 1 (lower is better)
Translates to: LLSHFCLSSEAKENE*TRWSGCRLDCGWFV
Trigger: GACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGTTCACTCATTCTCCTTTGCCTCAGAGCTAAGACAAAAATGAGACAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR GCA 90 bp ACACGGCAGATCGGTCCCCAAGGACAGGTGCTCAGCCAGGACTTTTaGTTTAAGAAGGATTTGTCTGGAGAAAGGACTAGAGAGAAATCC +
Preference number: 1 (lower is better)
Translates to: TRQIGPQGQVLSQDF*FKKDLSGERTREKS
Trigger: GGATTTCTCTCTAGTCCTTTCTCCAGACAAATCCTTCTTAAAGCAAAAGTCCTGGCTGAGCACCTGTCCTTGGGGACCGATCTGCCGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 90 bp GTTTTGCCCCAGGAAATGCAGGGCAGCTTCTTGAAAGTAGAGATGTaGGTAAGGAAGAGGCACTGGCTCACACTGATTGCTTTGGAGAAT +
Preference number: 1 (lower is better)
Translates to: VLPQEMQGSFLKVEM*VRKRHWLTLIALEN
Trigger: ATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCTCTTCCTTACCCACATCTCTACTTTCAAGAAGCTGCCCTGCATTTCCTGGGGCAAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 90 bp TCTAATGGAAAGCAGACTGGATTCACAACACAGAAGCAGAATTGGTaGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGA +
Preference number: 1 (lower is better)
Translates to: SNGKQTGFTTQKQNW*NRLSGTFFPWSHGR
Trigger: TCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTCTGCTTTCCATTAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR GCA 90 bp GCACGGCATCAATGTGGAGGCAGCCCTTTGGTGAGATTCTATTTGTaGATTTACCCCCATCATTTAGAAATAGTCTCCAGTGACTCCTGG +
Preference number: 1 (lower is better)
Translates to: ARHQCGGSPLVRFYL*IYPHHLEIVSSDSW
Trigger: CCAGGAGTCACTGGAGACTATTTCTAAATGATGGGGGTAAATGCACAAATAGAATCTCACCAAAGGGCTGCCTCCACATTGATGCCGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 90 bp TTTTCTAATGGAAAGCAGACTGGATTCACAACACAGAAGCAGAATTaGTGGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGC +
Preference number: 1 (lower is better)
Translates to: FSNGKQTGFTTQKQN*WNRLSGTFFPWSHG
Trigger: GCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTCTGCTTTCCATTAGAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR GCA 90 bp GAAAGTAGAGATGTGGGTAAGGAAGAGGCACTGGCTCACACTGATTaGTTTGGAGAATTCCAACGAGTTAGGACAATTCAAAAATCCTCT +
Preference number: 1 (lower is better)
Translates to: ESRDVGKEEALAHTD*FGEFQRVRTIQKSS
Trigger: AGAGGATTTTTGAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCTCTTCCTTACCCACATCTCTACTTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGGCCGTGAGAGCTCCTaGACGGAGGGACAGATGGGG +
Preference number: 2 (lower is better)
Translates to: PVASLPEPDGPGDCRASAGRESS*TEGQMG
Trigger: CCCCATCTGTCCCTCCGTCCAGGAGCTCTCACGGCC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCCCTCGGTCAGGGGCTTaGGAGCCAGGGACGGACAGT +
Preference number: 2 (lower is better)
Translates to: PVASLPEPDGPGDCRASAPRSGA*EPGTDS
Trigger: ACTGTCCGTCCCTGGCTCCCAAGCCCCTGACCGAGG...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATCTGGGGTGGGTGGCTaGCAACCACAGCGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRASGVGG*QPQRGG
Trigger: CCCTCCCCGCTGTGGTTGGCAGCCACCCACCCCAGA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGGGCCCTGCCACTTCTaGCTTTGTGGGTGGTTTGGT +
Preference number: 2 (lower is better)
Translates to: PVASLPEPDGPGDCRASAGPCHF*LCGWFG
Trigger: ACCAAACCACCCACAAAGGCAGAAGTGGCAGGGCCC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCTCTGCCTGGGGACACTaGCCTTTCTGCTGGCAGAGA +
Preference number: 2 (lower is better)
Translates to: PVASLPEPDGPGDCRASASAWGH*PFCWQR
Trigger: TCTCTGCCAGCAGAAAGGCCAGTGTCCCCAGGCAGA...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCCCGTGGGCAGTCCCATaGGTTAGGGCTGAAAGGCAA +
Preference number: 2 (lower is better)
Translates to: PVASLPEPDGPGDCRASAPWAVP*VRAERQ
Trigger: TTGCCTTTCAGCCCTAACCCATGGGACTGCCCACGG...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGTGGCAAAGTGGTCCTaGAACAGTTCCCCGCAAACC +
Preference number: 2 (lower is better)
Translates to: PVASLPEPDGPGDCRASAVAKWS*NSSPQT
Trigger: GGTTTGCGGGGAACTGTTTCAGGACCACTTTGCCAC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATGGCCTGCCCACCTGTaGAGTGCCAGGATGGGCCCA +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAWPAHL*SARMGP
Trigger: TGGGCCCATCCTGGCACTCCACAGGTGGGCAGGCCA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CAA 90 bp TTAGAACAGAGGAGGCAACAGGAGAGTGAGGCCTCGGTCAGGGGCTaGGGAGCCAGGGACGGACAGTCAGGGCTCCTTCCCCAGCCCAGG +
Preference number: 2 (lower is better)
Translates to: LEQRRQQESEASVRG*GARDGQSGLLPQPR
Trigger: CCTGGGCTGGGGAAGGAGCCCTGACTGTCCGTCCCTGGCTCCCAAGCCCCTGACCGAGGCCTCACTCTCCTGTTGCCTCCTCTGTTCTAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACTAGGGCTCGGGCCCTaGCACTTCTGCCTTTGTGGG +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRALGLGP*HFCLCG
Trigger: CCCACAAAGGCAGAAGTGGCAGGGCCCGAGCCCTAG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACTGCCTGCTGGGGCCTaGGTGGGGGTCACCTGCCTG +
Preference number: 2 (lower is better)
Translates to: GTGFRELSSPGHTADRSPLPAGA*VGVTCL
Trigger: CAGGCAGGTGACCCCCACCCAGGCCCCAGCAGGCAG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACAACAGATGGGGCCGTaGGAGCTCCTGGACGGAGGG +
Preference number: 2 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPQQMGP*ELLDGG
Trigger: CCCTCCGTCCAGGAGCTCTCACGGCCCCATCTGTTG...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCATCTGGGGTGGGTGGCTaGCAACCACAGCGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: GTGFRELSSPGHTADRSPSGVGG*QPQRGG
Trigger: CCCTCCCCGCTGTGGTTGGCAGCCACCCACCCCAGA...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCCAGAGCCCCCGGTCTaGTGCTTTGTAGGTCTGGGG +
Preference number: 2 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAPEPPV*CFVGLG
Trigger: CCCCAGACCTACAAAGCAGCAGACCGGGGGCTCTGG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGGGAGGTGTCTGGAGTaGGGGTGCGTGGGTGGGGTG +
Preference number: 2 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDGRCLE*GCVGGV
Trigger: CACCCCACCCACGCACCCCCACTCCAGACACCTCCC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCAGAAGGGAGGTGTCTaGAGTGGGGGTGCGTGGGTG +
Preference number: 2 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAQKGGV*SGGAWV
Trigger: CACCCACGCACCCCCACTCCAGACACCTCCCTTCTG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCAACAGATGGGGCCGTaGGAGCTCCTGGACGGAGGG +
Preference number: 2 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTQQMGP*ELLDGG
Trigger: CCCTCCGTCCAGGAGCTCTCACGGCCCCATCTGTTG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGTGTTTGTGCCCCTCTaGCTGGGGACACTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAVFVPL*LGTLAF
Trigger: AAAGGCCAGTGTCCCCAGGCAGAGGGGCACAAACAC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTGCCCACCTGTGGAGTaGCAGGATGGGCCCATGACT +
Preference number: 2 (lower is better)
Translates to: GWWHWFCPSGHGINVEAACPPVE*QDGPMT
Trigger: AGTCATGGGCCCATCCTGGCACTCCACAGGTGGGCA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGGGCCCTGCCACTTCTaGCTTTGTGGGTGGTTTGGT +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAGPCHF*LCGWFG
Trigger: ACCAAACCACCCACAAAGGCAGAAGTGGCAGGGCCC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCTTCCCCGCAAACCTCTaGTGTGGAGAACTGGAAAAA +
Preference number: 2 (lower is better)
Translates to: PVASLPEPDGPGDCRASAFPANL*CGELEK
Trigger: TTTTTCCAGTTCTCCACAGCAGAGGTTTGCGGGGAA...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGCCCAGAGGAGGGCGTaGATGGGGCGAGCGTCTTTC +
Preference number: 2 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDAQRRA*MGRASF
Trigger: GAAAGACGCTCGCCCCATGCACGCCCTCCTCTGGGC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATCTGCCTGGGGACACTaGCCTTTCTGCTGGCAGAGA +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRASAWGH*PFCWQR
Trigger: TCTCTGCCAGCAGAAAGGCCAGTGTCCCCAGGCAGA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCCTCGGTCAGGGGCTTaGGAGCCAGGGACGGACAGT +
Preference number: 2 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTPRSGA*EPGTDS
Trigger: ACTGTCCGTCCCTGGCTCCCAAGCCCCTGACCGAGG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGCAGCCAGGAGCTGCTaGCTAACCCTGATTCCCCAG +
Preference number: 2 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAAARSC*LTLIPQ
Trigger: CTGGGGAATCAGGGTTAGCCAGCAGCTCCTGGCTGC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGGCACGGCATCAATGTaGAGGCAGCCCTTTGGTGAG +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAGTASM*RQPFGE
Trigger: CTCACCAAAGGGCTGCCTCCACATTGATGCCGTGCC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGGTGTACCTGTGGGCTaGGGGCTCTGTGCGCAGAGG +
Preference number: 2 (lower is better)
Translates to: LYRGMATPRISTEHVAGIGVPVG*GLCAQR
Trigger: CCTCTGCGCACAGAGCCCCCAGCCCACAGGTACACC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGCCAGGATGGGCCCATaGCTCAGACTACCAGAGTAT +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAARMGP*LRLPEY
Trigger: ATACTCTGGTAGTCTGAGTCATGGGCCCATCCTGGC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGAGGCAACAGGAGAGTaGGGCCTCGGTCAGGGGCTT +
Preference number: 2 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDEATGE*GLGQGL
Trigger: AAGCCCCTGACCGAGGCCTCACTCTCCTGTTGCCTC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGAGCCCCCGGTCTGCTaGTTTGTAGGTCTGGGGCAG +
Preference number: 2 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTEPPVC*FVGLGQ
Trigger: CTGCCCCAGACCTACAAAGCAGCAGACCGGGGGCTC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGGAAGGTACAACAGATaGGGCCGTGAGAGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAGRYNR*GRESSW
Trigger: CCAGGAGCTCTCACGGCCCCATCTGTTGTACCTTCC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATGTGGAGTGCCAGGATaGGCCCATGACTCAGACTAC +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRACGVPG*AHDSDY
Trigger: GTAGTCTGAGTCATGGGCCCATCCTGGCACTCCACA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACTCACCTCTCCCAGTTaGGGCGAACACGCTAGAGTT +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRALTSPS*GEHARV
Trigger: AACTCTAGCGTGTTCGCCCCAACTGGGAGAGGTGAG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGAGGCAACAGGAGAGTaGGGCCTCGGTCAGGGGCTT +
Preference number: 2 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPEATGE*GLGQGL
Trigger: AAGCCCCTGACCGAGGCCTCACTCTCCTGTTGCCTC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAAGCCACTGCCTCCTCTaGTGCTTCCCTCAACAGGCA +
Preference number: 2 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPSHCLL*CFPQQA
Trigger: TGCCTGTTGAGGGAAGCAGCAGAGGAGGCAGTGGCT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACTTACGGAGGCGACAGTaGAGGCAGCTGGCTGCTGTC +
Preference number: 2 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDLRRRQ*RQLAAV
Trigger: GACAGCAGCCAGCTGCCTGCACTGTCGCCTCCGTAA...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCTTGTGCCCCTCTGCCTaGGGACACTGGCCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: LYRGMATPRISTEHVAGILCPSA*GHWPFC
Trigger: GCAGAAAGGCCAGTGTCCCCAGGCAGAGGGGCACAA...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCATTGTGCCCCTCTGCCTaGGGACACTGGCCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: GTGFRELSSPGHTADRSPLCPSA*GHWPFC
Trigger: GCAGAAAGGCCAGTGTCCCCAGGCAGAGGGGCACAA...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCTGCCTGCTGGGGCCTaGGTGGGGGTCACCTGCCTG +
Preference number: 2 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGLPAGA*VGVTCL
Trigger: CAGGCAGGTGACCCCCACCCAGGCCCCAGCAGGCAG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAAGGCTGGACTGTGGCTaGTTTGTCTGTCTAGTAGGG +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRARLDCG*FVCLVG
Trigger: CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGCAGCCAGGAGCTGCTaGCTAACCCTGATTCCCCAG +
Preference number: 2 (lower is better)
Translates to: GTGFRELSSPGHTADRSPAARSC*LTLIPQ
Trigger: CTGGGGAATCAGGGTTAGCCAGCAGCTCCTGGCTGC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATGGCCTCCTGGGACTTaGAGGAGTCACTTTCTGTCA +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAWPPGT*RSHFLS
Trigger: TGACAGAAAGTGACTCCTCCAAGTCCCAGGAGGCCA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGACATATACCCAGGCTaGTGGCATTGGTTCTGTCCC +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRADIYPG*WHWFCP
Trigger: GGGACAGAACCAATGCCACCAGCCTGGGTATATGTC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CAA 90 bp GGTGTAAGACAGCAAACAGGTCCAGGCCGTATCCACCAGCCACAGTaGTGGGTATTTCCTTGGGGTAGTGGAGACAGGGGCAGGGACGGG +
Preference number: 2 (lower is better)
Translates to: GVRQQTGPGRIHQPQ*WVFPWGSGDRGRDG
Trigger: CCCGTCCCTGCCCCTGTCTCCACTACCCCAAGGAAATACCCACAACTGTGGCTGGTGGATACGGCCTGGACCTGTTTGCTGTCTTACACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CAA 90 bp CCAGCAATATGGACAGTGTGGTCCAGGCTGGGCTTGCTGCTTCTCTaGGGGAGGATGAGAGCCCTAGTCTCTGAGGGAAGCAGCCAGGAG +
Preference number: 2 (lower is better)
Translates to: PAIWTVWSRLGLLLL*GRMRALVSEGSSQE
Trigger: CTCCTGGCTGCTTCCCTCAGAGACTAGGGCTCTCATCCTCCCCAAGAGAAGCAGCAAGCCCAGCCTGGACCACACTGTCCATATTGCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CAA 90 bp GCTTTTTCCAACAGAGGGAAGCAGAGGGACTTCTGGGTCTGGAAGTaGGAGCTTACGGAGGCGACAGTGCAGGCAGCTGGCTGCTGTCGG +
Preference number: 2 (lower is better)
Translates to: AFSNRGKQRDFWVWK*ELTEATVQAAGCCR
Trigger: CCGACAGCAGCCAGCTGCCTGCACTGTCGCCTCCGTAAGCTCCAACTTCCAGACCCAGAAGTCCCTCTGCTTCCCTCTGTTGGAAAAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGGAAAAACCCAGCCATaGGGGGAACAGGCTCCCTTG +
Preference number: 2 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRGKTQP*GEQAPL
Trigger: CAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGGGCCCTGCCACTTCTaGCTTTGTGGGTGGTTTGGT +
Preference number: 2 (lower is better)
Translates to: LYRGMATPRISTEHVAGIGPCHF*LCGWFG
Trigger: ACCAAACCACCCACAAAGGCAGAAGTGGCAGGGCCC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGAAGCAGCCAGGAGCTaGTGGCTAACCCTGATTCCC +
Preference number: 2 (lower is better)
Translates to: LYRGMATPRISTEHVAGIEAARS*WLTLIP
Trigger: GGGAATCAGGGTTAGCCAGCAGCTCCTGGCTGCTTC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTGTTCATTGCTAGGCTaGCCAGGGAGGAAACCTTGG +
Preference number: 2 (lower is better)
Translates to: GWWHWFCPSGHGINVEAACSLLG*PGRKPW
Trigger: CCAAGGTTTCCTCCCTGGGCAGCCTAGCAATGAACA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCCCCTGTGGCTTCTCTaGCTGAGCCTGACGGGCCCG +
Preference number: 2 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGPLWLL*LSLTGP
Trigger: CGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGGGG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCGTAGCAGGCATCTGTaGCAAGTCAGCCACTGCCTC +
Preference number: 2 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDRSRHL*QVSHCL
Trigger: GAGGCAGTGGCTGACTTGGCACAGATGCCTGCTACG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGGAAACGTCTGTTGCTaGACACTGGAAGCCAGATGC +
Preference number: 2 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAGNVCC*TLEARC
Trigger: GCATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGGCCGTGAGAGCTCCTaGACGGAGGGACAGATGGGG +
Preference number: 2 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVGRESS*TEGQMG
Trigger: CCCCATCTGTCCCTCCGTCCAGGAGCTCTCACGGCC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTTGTGCCCCTCTGCCTaGGGACACTGGCCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGLCPSA*GHWPFC
Trigger: GCAGAAAGGCCAGTGTCCCCAGGCAGAGGGGCACAA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCCTCGGTCAGGGGCTTaGGAGCCAGGGACGGACAGT +
Preference number: 2 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVPRSGA*EPGTDS
Trigger: ACTGTCCGTCCCTGGCTCCCAAGCCCCTGACCGAGG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGTGAACAAGGTGGTCTaGCTGCAGGCTGGACTGTGG +
Preference number: 2 (lower is better)
Translates to: GTGFRELSSPGHTADRSPVNKVV*LQAGLW
Trigger: CCACAGTCCAGCCTGCAGCCAGACCACCTTGTTCAC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGATTCCCCAGAACCCTaGAGCACAGTGGACTCCCAG +
Preference number: 2 (lower is better)
Translates to: LYRGMATPRISTEHVAGIDSPEP*STVDSQ
Trigger: CTGGGAGTCCACTGTGCTCCAGGGTTCTGGGGAATC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCAGTGTGGTCCAGGCTaGGCTTGCTGCTTCTCTTGG +
Preference number: 2 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTQCGPG*ACCFSW
Trigger: CCAAGAGAAGCAGCAAGCCCAGCCTGGACCACACTG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTGGCCTCCTGGGACTTaGAGGAGTCACTTTCTGTCA +
Preference number: 2 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAWPPGT*RSHFLS
Trigger: TGACAGAAAGTGACTCCTCCAAGTCCCAGGAGGCCA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCCGTGGGCAGTCCCATaGGTTAGGGCTGAAAGGCAA +
Preference number: 2 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRPWAVP*VRAERQ
Trigger: TTGCCTTTCAGCCCTAACCCATGGGACTGCCCACGG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAATATACCCAGGCTGGTaGCATTGGTTCTGTCCCTCT +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAIYPGW*HWFCPS
Trigger: AGAGGGACAGAACCAATGCCACCAGCCTGGGTATAT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGAAACCTCGACCAGTTaGTTCCTCCCCCACTGCCCA +
Preference number: 2 (lower is better)
Translates to: GTGFRELSSPGHTADRSPETSTS*FLPHCP
Trigger: TGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CAA 90 bp TCAGGCCACTGTCCAGCAATATGGACAGTGTGGTCCAGGCTGGGCTaGCTGCTTCTCTTGGGGAGGATGAGAGCCCTAGTCTCTGAGGGA +
Preference number: 2 (lower is better)
Translates to: SGHCPAIWTVWSRLG*LLLLGRMRALVSEG
Trigger: TCCCTCAGAGACTAGGGCTCTCATCCTCCCCAAGAGAAGCAGCAAGCCCAGCCTGGACCACACTGTCCATATTGCTGGACAGTGGCCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGCAAAGGAGAATGAGTaGACAAGGTGGTCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPAKENE*TRWSGC
Trigger: GCAGCCAGACCACCTTGTTCACTCATTCTCCTTTGC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCAGAAATAGTCTCCAGTaGCTCCTGGCCCCTGTGGCT +
Preference number: 2 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTRNSLQ*LLAPVA
Trigger: AGCCACAGGGGCCAGGAGTCACTGGAGACTATTTCT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACCTGGGCTGAAGCAATaGCCTTTATGCAGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: GTGFRELSSPGHTADRSPPGLKQ*PLCSSQ
Trigger: CTGGGAGCTGCATAAAGGGCATTGCTTCAGCCCAGG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGGGGCAGGAAGAGCTTaGCCAGGCAGATTTCTAACC +
Preference number: 2 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRGAGRA*PGRFLT
Trigger: GGTTAGAAATCTGCCTGGGCAAGCTCTTCCTGCCCC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCATGTTCATTGCTAGGCTaGCCAGGGAGGAAACCTTGG +
Preference number: 2 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPCSLLG*PGRKPW
Trigger: CCAAGGTTTCCTCCCTGGGCAGCCTAGCAATGAACA...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGCCGGGCCTCTGCCCTaGCGGCTGCACTGTTCATTG +
Preference number: 2 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGAGPLP*RLHCSL
Trigger: CAATGAACAGTGCAGCCGGCAGGGCAGAGGCCCGGC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAAGGGGGTTAGAGCTGTaGCCAGTGACATATACCCAG +
Preference number: 2 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPRGLEL*PVTYTQ
Trigger: CTGGGTATATGTCACTGGGCACAGCTCTAACCCCCT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCACTGCCTCCTCTGCTaGTTCCCTCAACAGGCACAA +
Preference number: 2 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRHCLLC*FPQQAQ
Trigger: TTGTGCCTGTTGAGGGAAGCAGCAGAGGAGGCAGTG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCATGTGGAGTGCCAGGATaGGCCCATGACTCAGACTAC +
Preference number: 2 (lower is better)
Translates to: GTGFRELSSPGHTADRSPCGVPG*AHDSDY
Trigger: GTAGTCTGAGTCATGGGCCCATCCTGGCACTCCACA...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTGTGGAGTGCCAGGATaGGCCCATGACTCAGACTAC +
Preference number: 2 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRCGVPG*AHDSDY
Trigger: GTAGTCTGAGTCATGGGCCCATCCTGGCACTCCACA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCCTCACCTCTCCCAGTTaGGGCGAACACGCTAGAGTT +
Preference number: 2 (lower is better)
Translates to: LYRGMATPRISTEHVAGILTSPS*GEHARV
Trigger: AACTCTAGCGTGTTCGCCCCAACTGGGAGAGGTGAG...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGCAATATGGACAGTGTaGTCCAGGCTGGGCTTGCTG +
Preference number: 2 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTAIWTV*SRLGLL
Trigger: CAGCAAGCCCAGCCTGGACCACACTGTCCATATTGC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCAAAGCCCTGGCCTCCTaGGACTTGGAGGAGTCACTT +
Preference number: 2 (lower is better)
Translates to: LYRGMATPRISTEHVAGIKALAS*DLEESL
Trigger: AAGTGACTCCTCCAAGTCCCAGGAGGCCAGGGCTTT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGAAGTCTCCAATCCGTaGGCAGTCCCATGGGTTAGG +
Preference number: 2 (lower is better)
Translates to: GTGFRELSSPGHTADRSPEVSNP*AVPWVR
Trigger: CCTAACCCATGGGACTGCCCACGGATTGGAGACTTC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGGCAGATTTCTAACCTaGGCTGAAGCAATGCCCTTT +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAGRFLT*AEAMPF
Trigger: AAAGGGCATTGCTTCAGCCCAGGTTAGAAATCTGCC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCCAGGGAGGAAACCTTaGGTGGGTAGGCTGTTTGAG +
Preference number: 2 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRPGRKP*VGRLFE
Trigger: CTCAAACAGCCTACCCACCCAAGGTTTCCTCCCTGG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGGTGTACCTGTGGGCTaGGGGCTCTGTGCGCAGAGG +
Preference number: 2 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGGVPVG*GLCAQR
Trigger: CCTCTGCGCACAGAGCCCCCAGCCCACAGGTACACC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGGCACTGGCTCACACTaGTTGCTTTGGAGAATTCCA +
Preference number: 2 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPGTGSH*LLWRIP
Trigger: TGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGCAAAGGAGAATGAGTaGACAAGGTGGTCTGGCTGC +
Preference number: 2 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDAKENE*TRWSGC
Trigger: GCAGCCAGACCACCTTGTTCACTCATTCTCCTTTGC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGAGAGCCCTAGTCTCTaGGGGAAGCAGCCAGGAGCT +
Preference number: 2 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVESPSL*GKQPGA
Trigger: AGCTCCTGGCTGCTTCCCTCAGAGACTAGGGCTCTC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGAGGCAGCCCTTTGGTaGGATTCTATTTGTGCATTT +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAEAALW*DSICAF
Trigger: AAATGCACAAATAGAATCTCACCAAAGGGCTGCCTC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATACAAAGTAGAGTTTTaGCCCAGGAAATGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAYKVEF*PRKCRA
Trigger: TGCCCTGCATTTCCTGGGGCAAAACTCTACTTTGTA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGACAAGGTGGTCTGGCTaGAGGCTGGACTGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVTRWSG*RLDCGW
Trigger: CCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGAAGCAATGCCCTTTATaGAGCTCCCAGACCTCAGCC +
Preference number: 2 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRKQCPL*SSQTSA
Trigger: GGCTGAGGTCTGGGAGCTGCATAAAGGGCATTGCTT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACAAGCAATGCCCTTTATaGAGCTCCCAGACCTCAGCC +
Preference number: 2 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDKQCPL*SSQTSA
Trigger: GGCTGAGGTCTGGGAGCTGCATAAAGGGCATTGCTT...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCATGTTCATTGCTAGGCTaGCCAGGGAGGAAACCTTGG +
Preference number: 2 (lower is better)
Translates to: GTGFRELSSPGHTADRSPCSLLG*PGRKPW
Trigger: CCAAGGTTTCCTCCCTGGGCAGCCTAGCAATGAACA...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAATGATTCGAGGAAAGTaGCTGGAAACGTCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAMIRGK*LETSVA
Trigger: AGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCACTGGCCTTTCTGCTaGCAGAGAGGGGTGGCTACG +
Preference number: 2 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVHWPFC*QRGVAT
Trigger: CGTAGCCACCCCTCTCTGCCAGCAGAAAGGCCAGTG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCTGCCTGCTGGGGCCTaGGTGGGGGTCACCTGCCTG +
Preference number: 2 (lower is better)
Translates to: RHWLTLIALENSNELGQFLPAGA*VGVTCL
Trigger: CAGGCAGGTGACCCCCACCCAGGCCCCAGCAGGCAG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGGTCAAAAGAATCTGTaGTGGCTGGGTGAAGTATCA +
Preference number: 2 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAGQKNL*WLGEVS
Trigger: TGATACTTCACCCAGCCACCACAGATTCTTTTGACC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGATAGCTCAAGAGCCCTaGGGCAGGCACTTGATTCAC +
Preference number: 2 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRIAQEP*GRHLIH
Trigger: GTGAATCAAGTGCCTGCCCCAGGGCTCTTGAGCTAT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAATAGCTCAAGAGCCCTaGGGCAGGCACTTGATTCAC +
Preference number: 2 (lower is better)
Translates to: GTGFRELSSPGHTADRSPIAQEP*GRHLIH
Trigger: GTGAATCAAGTGCCTGCCCCAGGGCTCTTGAGCTAT...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCCACTGTCCAGCAATATaGACAGTGTGGTCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: LYRGMATPRISTEHVAGIHCPAI*TVWSRL
Trigger: CAGCCTGGACCACACTGTCCATATTGCTGGACAGTG...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACACTGTCCAGCAATATaGACAGTGTGGTCCAGGCTG +
Preference number: 2 (lower is better)
Translates to: GTGFRELSSPGHTADRSPHCPAI*TVWSRL
Trigger: CAGCCTGGACCACACTGTCCATATTGCTGGACAGTG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCTGGCCTCCTGGGACTTaGAGGAGTCACTTTCTGTCA +
Preference number: 2 (lower is better)
Translates to: LYRGMATPRISTEHVAGIWPPGT*RSHFLS
Trigger: TGACAGAAAGTGACTCCTCCAAGTCCCAGGAGGCCA...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTTGGTTCTGTCCCTCTaGGCACGGCATCAATGTGGA +
Preference number: 2 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTLVLSL*ARHQCG
Trigger: TCCACATTGATGCCGTGCCCAGAGGGACAGAACCAA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACTTGGTTCTGTCCCTCTaGGCACGGCATCAATGTGGA +
Preference number: 2 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDLVLSL*ARHQCG
Trigger: TCCACATTGATGCCGTGCCCAGAGGGACAGAACCAA...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CAA 90 bp CTGGTTTGTCTGTCTAGTAGGGACCAAGCAGGGAAAGGCCACGAATaGGAAGAGGCAAGTACAGCCCCGCACAGGGAACTCACAGAAGGG +
Preference number: 2 (lower is better)
Translates to: LVCLSSRDQAGKGHE*EEASTAPHRELTEG
Trigger: CCCTTCTGTGAGTTCCCTGTGCGGGGCTGTACTTGCCTCTTCCAATTCGTGGCCTTTCCCTGCTTGGTCCCTACTAGACAGACAAACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGCTGAGGAAGTGGGATaGTTCGAGGAAAGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWAEEVG*FEESGW
Trigger: CCAGCCACTTTCCTCGAATCATCCCACTTCCTCAGC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGGAAAAACCCAGCCATaGGGGGAACAGGCTCCCTTG +
Preference number: 2 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVGKTQP*GEQAPL
Trigger: CAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTCTGTGGTGGCTGGGTaGAGTATCAAACACCATCCT +
Preference number: 2 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTSVVAG*SIKHHP
Trigger: AGGATGGTGTTTGATACTTCACCCAGCCACCACAGA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGGCACTGGCTCACACTaGTTGCTTTGGAGAATTCCA +
Preference number: 2 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDGTGSH*LLWRIP
Trigger: TGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGGTTGAGCCCAGAGTaGGAGCCACAGGTGCGGGCG +
Preference number: 2 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGLSPE*EPQVRA
Trigger: CGCCCGCACCTGTGGCTCTCACTCTGGGCTCAACCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTCTGGGGTGGGTGGCTaGCAACCACAGCGGGGAGGG +
Preference number: 2 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFSGVGG*QPQRGG
Trigger: CCCTCCCCGCTGTGGTTGGCAGCCACCCACCCCAGA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGTGTTTGTGCCCCTCTaGCTGGGGACACTGGCCTTT +
Preference number: 2 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVVFVPL*LGTLAF
Trigger: AAAGGCCAGTGTCCCCAGGCAGAGGGGCACAAACAC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCCCCTGTGGCTTCTCTaGCTGAGCCTGACGGGCCCG +
Preference number: 2 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFPLWLL*LSLTGP
Trigger: CGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGGGG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCATTCGAGGAAAGTGGCTaGAAACGTCTGTTGCTGGAC +
Preference number: 2 (lower is better)
Translates to: GTGFRELSSPGHTADRSPFEESG*KRLLLD
Trigger: GTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAA...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCATGGGGCTGAGGAAGTaGGATGATTCGAGGAAAGTG +
Preference number: 2 (lower is better)
Translates to: LYRGMATPRISTEHVAGIMGLRK*DDSRKV
Trigger: CACTTTCCTCGAATCATCCCACTTCCTCAGCCCCAT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGGAGGTGTCTGGAGTaGGGGTGCGTGGGTGGGGTG +
Preference number: 2 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGRCLE*GCVGGV
Trigger: CACCCCACCCACGCACCCCCACTCCAGACACCTCCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCACCAGCCACAGTTGTaGGTATTTCCTTGGGGTAGT +
Preference number: 2 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDHQPQL*VFPWGS
Trigger: ACTACCCCAAGGAAATACCCACAACTGTGGCTGGTG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGGTCAAAAGAATCTGTaGTGGCTGGGTGAAGTATCA +
Preference number: 2 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAGQKNL*WLGEVS
Trigger: TGATACTTCACCCAGCCACCACAGATTCTTTTGACC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCTGCTCTGTATAGGGTaGCATCAAACCCAGCCTTCA +
Preference number: 2 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDLLCIG*HQTQPS
Trigger: TGAAGGCTGGGTTTGATGCCACCCTATACAGAGCAG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGCTGAGGAAGTGGGATaGTTCGAGGAAAGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVAEEVG*FEESGW
Trigger: CCAGCCACTTTCCTCGAATCATCCCACTTCCTCAGC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGGAAAAACCCAGCCATaGGGGGAACAGGCTCCCTTG +
Preference number: 2 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSGKTQP*GEQAPL
Trigger: CAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGAGGCAGCCCTTTGGTaGGATTCTATTTGTGCATTT +
Preference number: 2 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPEAALW*DSICAF
Trigger: AAATGCACAAATAGAATCTCACCAAAGGGCTGCCTC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCCTCCTCCTTCTACCTaGACCTATTATTTTGTGTTG +
Preference number: 2 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAPPPST*TYYFVL
Trigger: CAACACAAAATAATAGGTGCAGGTAGAAGGAGGAGG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTCTGTTGCTGGACACTaGAAGCCAGATGCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGSVAGH*KPDAEA
Trigger: TGCTTCAGCATCTGGCTTCCAGTGTCCAGCAACAGA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCATGGGGCTGAGGAAGTaGGATGATTCGAGGAAAGTG +
Preference number: 2 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPMGLRK*DDSRKV
Trigger: CACTTTCCTCGAATCATCCCACTTCCTCAGCCCCAT...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGGCCGTGAGAGCTCCTaGACGGAGGGACAGATGGGG +
Preference number: 2 (lower is better)
Translates to: RHWLTLIALENSNELGQFGRESS*TEGQMG
Trigger: CCCCATCTGTCCCTCCGTCCAGGAGCTCTCACGGCC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGGAAGGTACAACAGATaGGGCCGTGAGAGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGGRYNR*GRESSW
Trigger: CCAGGAGCTCTCACGGCCCCATCTGTTGTACCTTCC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCATCTGCCTGGGGACACTaGCCTTTCTGCTGGCAGAGA +
Preference number: 2 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSSAWGH*PFCWQR
Trigger: TCTCTGCCAGCAGAAAGGCCAGTGTCCCCAGGCAGA...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTGGCCTGCCCACCTGTaGAGTGCCAGGATGGGCCCA +
Preference number: 2 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFWPAHL*SARMGP
Trigger: TGGGCCCATCCTGGCACTCCACAGGTGGGCAGGCCA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCCGTGGGCAGTCCCATaGGTTAGGGCTGAAAGGCAA +
Preference number: 2 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGPWAVP*VRAERQ
Trigger: TTGCCTTTCAGCCCTAACCCATGGGACTGCCCACGG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGGCAGATTTCTAACCTaGGCTGAAGCAATGCCCTTT +
Preference number: 2 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDGRFLT*AEAMPF
Trigger: AAAGGGCATTGCTTCAGCCCAGGTTAGAAATCTGCC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGGCACGGCATCAATGTaGAGGCAGCCCTTTGGTGAG +
Preference number: 2 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGGTASM*RQPFGE
Trigger: CTCACCAAAGGGCTGCCTCCACATTGATGCCGTGCC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGCCAGGATGGGCCCATaGCTCAGACTACCAGAGTAT +
Preference number: 2 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGARMGP*LRLPEY
Trigger: ATACTCTGGTAGTCTGAGTCATGGGCCCATCCTGGC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGTGGCAAAGTGGTCCTaGAACAGTTCCCCGCAAACC +
Preference number: 2 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSVAKWS*NSSPQT
Trigger: GGTTTGCGGGGAACTGTTTCAGGACCACTTTGCCAC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGATTTCTAACCTGGGCTaGAGCAATGCCCTTTATGCA +
Preference number: 2 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRISNLG*SNALYA
Trigger: TGCATAAAGGGCATTGCTTCAGCCCAGGTTAGAAAT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCTAGGGCTCGGGCCCTaGCACTTCTGCCTTTGTGGG +
Preference number: 2 (lower is better)
Translates to: RHWLTLIALENSNELGQFLGLGP*HFCLCG
Trigger: CCCACAAAGGCAGAAGTGGCAGGGCCCGAGCCCTAG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCTGGCTCACACTGATTaGTTTGGAGAATTCCAACGA +
Preference number: 2 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDLAHTD*FGEFQR
Trigger: TCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCCTGGGCTGAAGCAATaGCCTTTATGCAGCTCCCAG +
Preference number: 2 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGPGLKQ*PLCSSQ
Trigger: CTGGGAGCTGCATAAAGGGCATTGCTTCAGCCCAGG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGTCTGTTGCTGGACACTaGAAGCCAGATGCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWSVAGH*KPDAEA
Trigger: TGCTTCAGCATCTGGCTTCCAGTGTCCAGCAACAGA...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGATGATTCGAGGAAAGTaGCTGGAAACGTCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRMIRGK*LETSVA
Trigger: AGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCAGAAGGGAGGTGTCTaGAGTGGGGGTGCGTGGGTG +
Preference number: 2 (lower is better)
Translates to: RHWLTLIALENSNELGQFQKGGV*SGGAWV
Trigger: CACCCACGCACCCCCACTCCAGACACCTCCCTTCTG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGAGAATCTGTGGTGGCTaGGTGAAGTATCAAACACCA +
Preference number: 2 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRRICGG*VKYQTP
Trigger: TGGTGTTTGATACTTCACCCAGCCACCACAGATTCT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCAGAATCTGTGGTGGCTaGGTGAAGTATCAAACACCA +
Preference number: 2 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTRICGG*VKYQTP
Trigger: TGGTGTTTGATACTTCACCCAGCCACCACAGATTCT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACAAAAGAATCTGTGGTaGCTGGGTGAAGTATCAAAC +
Preference number: 2 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPQKNLW*LGEVSN
Trigger: GTTTGATACTTCACCCAGCCACCACAGATTCTTTTG...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGGAAAGGCCACGAATTaGAAGAGGCAAGTACAGCCC +
Preference number: 2 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVGKATN*KRQVQP
Trigger: GGGCTGTACTTGCCTCTTCCAATTCGTGGCCTTTCC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCAACAGATGGGGCCGTaGGAGCTCCTGGACGGAGGG +
Preference number: 2 (lower is better)
Translates to: RGIWKLILLGFFQQREAEQQMGP*ELLDGG
Trigger: CCCTCCGTCCAGGAGCTCTCACGGCCCCATCTGTTG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCAATAAACAGGAACCTTaGTCGCATCTGTACACAGGA +
Preference number: 2 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTNKQEP*SHLYTG
Trigger: TCCTGTGTACAGATGCGATCAAGGTTCCTGTTTATT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGAAAGGCACAGGTAACTaGATACATGGGAAGGTACAA +
Preference number: 2 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRKGTGN*IHGKVQ
Trigger: TTGTACCTTCCCATGTATGCAGTTACCTGTGCCTTT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCCTCCTCCTTCTACCTaGACCTATTATTTTGTGTTG +
Preference number: 2 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDPPPST*TYYFVL
Trigger: CAACACAAAATAATAGGTGCAGGTAGAAGGAGGAGG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCACTGGCCTTTCTGCTaGCAGAGAGGGGTGGCTACG +
Preference number: 2 (lower is better)
Translates to: RHWLTLIALENSNELGQFHWPFC*QRGVAT
Trigger: CGTAGCCACCCCTCTCTGCCAGCAGAAAGGCCAGTG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCACTGGCCTTTCTGCTaGCAGAGAGGGGTGGCTACG +
Preference number: 2 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFHWPFC*QRGVAT
Trigger: CGTAGCCACCCCTCTCTGCCAGCAGAAAGGCCAGTG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACTTCTGCCTTTGTGGGTaGTTTGGTGGTTTTAGAACA +
Preference number: 2 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDFCLCG*FGGFRT
Trigger: TGTTCTAAAACCACCAAACCACCCACAAAGGCAGAA...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCATTCTGCCTTTGTGGGTaGTTTGGTGGTTTTAGAACA +
Preference number: 2 (lower is better)
Translates to: GTGFRELSSPGHTADRSPFCLCG*FGGFRT
Trigger: TGTTCTAAAACCACCAAACCACCCACAAAGGCAGAA...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGGGGAAACGGTCCTGTaGCAAAGTGGTCCTGAAACA +
Preference number: 2 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSGETVL*QSGPET
Trigger: TGTTTCAGGACCACTTTGCCACAGGACCGTTTCCCC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCACCAGCCACAGTTGTaGGTATTTCCTTGGGGTAGT +
Preference number: 2 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVHQPQL*VFPWGS
Trigger: ACTACCCCAAGGAAATACCCACAACTGTGGCTGGTG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGGAAAGGCCACGAATTaGAAGAGGCAAGTACAGCCC +
Preference number: 2 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGGKATN*KRQVQP
Trigger: GGGCTGTACTTGCCTCTTCCAATTCGTGGCCTTTCC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTTTGGTTCTGTCCCTCTaGGCACGGCATCAATGTGGA +
Preference number: 2 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGLVLSL*ARHQCG
Trigger: TCCACATTGATGCCGTGCCCAGAGGGACAGAACCAA...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGAAAGGCACAGGTAACTaGATACATGGGAAGGTACAA +
Preference number: 2 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGKGTGN*IHGKVQ
Trigger: TTGTACCTTCCCATGTATGCAGTTACCTGTGCCTTT...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGCCTCCTCCTTCTACCTaGACCTATTATTTTGTGTTG +
Preference number: 2 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGPPPST*TYYFVL
Trigger: CAACACAAAATAATAGGTGCAGGTAGAAGGAGGAGG...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCTGGCTCACACTGATTaGTTTGGAGAATTCCAACGA +
Preference number: 2 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWLAHTD*FGEFQR
Trigger: TCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTACTCCCAGGGAGCCCTaGCTTCTGTCTCATTTTTGT +
Preference number: 2 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGTPREP*LLSHFC
Trigger: ACAAAAATGAGACAGAAGGCAGGGCTCCCTGGGAGT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCATCTGTTGCTGGACACTaGAAGCCAGATGCTGAAGCA +
Preference number: 2 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSSVAGH*KPDAEA
Trigger: TGCTTCAGCATCTGGCTTCCAGTGTCCAGCAACAGA...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGCAAAAGAATCTGTGGTaGCTGGGTGAAGTATCAAAC +
Preference number: 2 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGQKNLW*LGEVSN
Trigger: GTTTGATACTTCACCCAGCCACCACAGATTCTTTTG...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGTCTGGCTGCAGGCTaGACTGTGGCTGGTTTGTCT +
Preference number: 2 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGLAAG*TVAGLS
Trigger: AGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCAGTGTGGTCCAGGCTaGGCTTGCTGCTTCTCTTGG +
Preference number: 2 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFQCGPG*ACCFSW
Trigger: CCAAGAGAAGCAGCAAGCCCAGCCTGGACCACACTG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGTGGCAAAGTGGTCCTaGAACAGTTCCCCGCAAACC +
Preference number: 2 (lower is better)
Translates to: RHWLTLIALENSNELGQFVAKWS*NSSPQT
Trigger: GGTTTGCGGGGAACTGTTTCAGGACCACTTTGCCAC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTGCCCACCTGTGGAGTaGCAGGATGGGCCCATGACT +
Preference number: 2 (lower is better)
Translates to: RGIWKLILLGFFQQREAECPPVE*QDGPMT
Trigger: AGTCATGGGCCCATCCTGGCACTCCACAGGTGGGCA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGTACAAAGTAGAGTTTTaGCCCAGGAAATGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVYKVEF*PRKCRA
Trigger: TGCCCTGCATTTCCTGGGGCAAAACTCTACTTTGTA...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGACAAGGTGGTCTGGCTaGAGGCTGGACTGTGGCTGG +
Preference number: 2 (lower is better)
Translates to: RGIWKLILLGFFQQREAETRWSG*RLDCGW
Trigger: CCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGTCCCCAAGGACAGGTaGTCAGCCAGGACTTTTGCT +
Preference number: 2 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFVPKDR*SARTFA
Trigger: AGCAAAAGTCCTGGCTGAGCACCTGTCCTTGGGGAC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGGGAGGTGTCTGGAGTaGGGGTGCGTGGGTGGGGTG +
Preference number: 2 (lower is better)
Translates to: SFALIYTIPTLQDASVETGRCLE*GCVGGV
Trigger: CACCCCACCCACGCACCCCCACTCCAGACACCTCCC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCCAGGGAGGAAACCTTaGGTGGGTAGGCTGTTTGAG +
Preference number: 2 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFPGRKP*VGRLFE
Trigger: CTCAAACAGCCTACCCACCCAAGGTTTCCTCCCTGG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGCAAGGTTTGGCTCTaGAACCTCGACCAGTTGGTT +
Preference number: 2 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGKVWL*NLDQLV
Trigger: AACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGCCGGGCCTCTGCCCTaGCGGCTGCACTGTTCATTG +
Preference number: 2 (lower is better)
Translates to: SFALIYTIPTLQDASVETAGPLP*RLHCSL
Trigger: CAATGAACAGTGCAGCCGGCAGGGCAGAGGCCCGGC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGTGAGATTCTATTTGTaGATTTACCCCCATCATTTA +
Preference number: 2 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDVRFYL*IYPHHL
Trigger: TAAATGATGGGGGTAAATGCACAAATAGAATCTCAC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGAGCCACTGCCTCCTCTaGTGCTTCCCTCAACAGGCA +
Preference number: 2 (lower is better)
Translates to: RGIWKLILLGFFQQREAESHCLL*CFPQQA
Trigger: TGCCTGTTGAGGGAAGCAGCAGAGGAGGCAGTGGCT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGGAAACGTCTGTTGCTaGACACTGGAAGCCAGATGC +
Preference number: 2 (lower is better)
Translates to: RHWLTLIALENSNELGQFGNVCC*TLEARC
Trigger: GCATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTATGATTCGAGGAAAGTaGCTGGAAACGTCTGTTGCT +
Preference number: 2 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGMIRGK*LETSVA
Trigger: AGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTTGGCCTGCCCACCTGTaGAGTGCCAGGATGGGCCCA +
Preference number: 2 (lower is better)
Translates to: SFALIYTIPTLQDASVETWPAHL*SARMGP
Trigger: TGGGCCCATCCTGGCACTCCACAGGTGGGCAGGCCA...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGGGGAAACGGTCCTGTaGCAAAGTGGTCCTGAAACA +
Preference number: 2 (lower is better)
Translates to: RHWLTLIALENSNELGQFGETVL*QSGPET
Trigger: TGTTTCAGGACCACTTTGCCACAGGACCGTTTCCCC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCAAAAGAATCTGTGGTaGCTGGGTGAAGTATCAAAC +
Preference number: 2 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVQKNLW*LGEVSN
Trigger: GTTTGATACTTCACCCAGCCACCACAGATTCTTTTG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGATTCCCCAGAACCCTaGAGCACAGTGGACTCCCAG +
Preference number: 2 (lower is better)
Translates to: RGIWKLILLGFFQQREAEDSPEP*STVDSQ
Trigger: CTGGGAGTCCACTGTGCTCCAGGGTTCTGGGGAATC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CAA 90 bp TGGGCACGGCATCAATGTGGAGGCAGCCCTTTGGTGAGATTCTATTaGTGCATTTACCCCCATCATTTAGAAATAGTCTCCAGTGACTCC +
Preference number: 2 (lower is better)
Translates to: WARHQCGGSPLVRFY*CIYPHHLEIVSSDS
Trigger: GGAGTCACTGGAGACTATTTCTAAATGATGGGGGTAAATGCACAAATAGAATCTCACCAAAGGGCTGCCTCCACATTGATGCCGTGCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAAATAAACAGGAACCTTaGTCGCATCTGTACACAGGA +
Preference number: 2 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSNKQEP*SHLYTG
Trigger: TCCTGTGTACAGATGCGATCAAGGTTCCTGTTTATT...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTCTGTGGTGGCTGGGTaGAGTATCAAACACCATCCT +
Preference number: 2 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFSVVAG*SIKHHP
Trigger: AGGATGGTGTTTGATACTTCACCCAGCCACCACAGA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGAGGGTTGCAGGGGTTaGGCCCAGAGTGAGAGCCAC +
Preference number: 2 (lower is better)
Translates to: SFALIYTIPTLQDASVETEGCRG*AQSESH
Trigger: GTGGCTCTCACTCTGGGCTCAACCCCTGCAACCCTC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTACTCCCAGGGAGCCCTaGCTTCTGTCTCATTTTTGT +
Preference number: 2 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFTPREP*LLSHFC
Trigger: ACAAAAATGAGACAGAAGGCAGGGCTCCCTGGGAGT...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCACCAGCCACAGTTGTaGGTATTTCCTTGGGGTAGT +
Preference number: 2 (lower is better)
Translates to: RHWLTLIALENSNELGQFHQPQL*VFPWGS
Trigger: ACTACCCCAAGGAAATACCCACAACTGTGGCTGGTG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGAAGTCTCCAATCCGTaGGCAGTCCCATGGGTTAGG +
Preference number: 2 (lower is better)
Translates to: RGIWKLILLGFFQQREAEEVSNP*AVPWVR
Trigger: CCTAACCCATGGGACTGCCCACGGATTGGAGACTTC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCCAGGGAGGAAACCTTaGGTGGGTAGGCTGTTTGAG +
Preference number: 2 (lower is better)
Translates to: RGIWKLILLGFFQQREAEPGRKP*VGRLFE
Trigger: CTCAAACAGCCTACCCACCCAAGGTTTCCTCCCTGG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CAA 90 bp TTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCTTaGGTGAGATTCTATTTGTGCATTTACCCCCATCATTTAGAAATA +
Preference number: 2 (lower is better)
Translates to: LVLSLWARHQCGGSP*VRFYLCIYPHHLEI
Trigger: TATTTCTAAATGATGGGGGTAAATGCACAAATAGAATCTCACCAAAGGGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CAA 90 bp CCCCAAGGACAGGTGCTCAGCCAGGACTTTTGCTTTAAGAAGGATTaGTCTGGAGAAAGGACTAGAGAGAAATCCAGCTCAGATGTATTG +
Preference number: 2 (lower is better)
Translates to: PQGQVLSQDFCFKKD*SGERTREKSSSDVL
Trigger: CAATACATCTGAGCTGGATTTCTCTCTAGTCCTTTCTCCAGACAAATCCTTCTTAAAGCAAAAGTCCTGGCTGAGCACCTGTCCTTGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGACATATACCCAGGCTaGTGGCATTGGTTCTGTCCC +
Preference number: 2 (lower is better)
Translates to: RGIWKLILLGFFQQREAEDIYPG*WHWFCP
Trigger: GGGACAGAACCAATGCCACCAGCCTGGGTATATGTC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTAGAGGAGGGCGTGCATaGGGCGAGCGTCTTTCTCCA +
Preference number: 2 (lower is better)
Translates to: SFALIYTIPTLQDASVETRGGRA*GERLSP
Trigger: TGGAGAAAGACGCTCGCCCCATGCACGCCCTCCTCT...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTACAAAGTAGAGTTTTaGCCCAGGAAATGCAGGGCA +
Preference number: 2 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFYKVEF*PRKCRA
Trigger: TGCCCTGCATTTCCTGGGGCAAAACTCTACTTTGTA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCCAGCTCAGATGTATTaGTCATTCCTCTTCAGAAGG +
Preference number: 2 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFPAQMY*SFLFRR
Trigger: CCTTCTGAAGAGGAATGAGCAATACATCTGAGCTGG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTTCGAGGAAAGTGGCTaGAAACGTCTGTTGCTGGAC +
Preference number: 2 (lower is better)
Translates to: RGIWKLILLGFFQQREAEFEESG*KRLLLD
Trigger: GTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGGAAGGTACAACAGATaGGGCCGTGAGAGCTCCTGG +
Preference number: 2 (lower is better)
Translates to: SFALIYTIPTLQDASVETGRYNR*GRESSW
Trigger: CCAGGAGCTCTCACGGCCCCATCTGTTGTACCTTCC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGTGAACAAGGTGGTCTaGCTGCAGGCTGGACTGTGG +
Preference number: 2 (lower is better)
Translates to: SFALIYTIPTLQDASVETVNKVV*LQAGLW
Trigger: CCACAGTCCAGCCTGCAGCCAGACCACCTTGTTCAC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGGAGGAAACCTTGGGTaGGTAGGCTGTTTGAGTACA +
Preference number: 2 (lower is better)
Translates to: RGIWKLILLGFFQQREAEGGNLG*VGCLST
Trigger: TGTACTCAAACAGCCTACCCACCCAAGGTTTCCTCC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CAA 90 bp GTAGAGATGTGGGTAAGGAAGAGGCACTGGCTCACACTGATTGCTTaGGAGAATTCCAACGAGTTAGGACAATTCAAAAATCCTCTAGGT +
Preference number: 2 (lower is better)
Translates to: VEMWVRKRHWLTLIA*ENSNELGQFKNPLG
Trigger: ACCTAGAGGATTTTTGAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCTCTTCCTTACCCACATCTCTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTTCTGCCTTTGTGGGTaGTTTGGTGGTTTTAGAACA +
Preference number: 2 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFFCLCG*FGGFRT
Trigger: TGTTCTAAAACCACCAAACCACCCACAAAGGCAGAA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCTGGCTCACACTGATTaGTTTGGAGAATTCCAACGA +
Preference number: 2 (lower is better)
Translates to: RGIWKLILLGFFQQREAELAHTD*FGEFQR
Trigger: TCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGGGGAAACGGTCCTGTaGCAAAGTGGTCCTGAAACA +
Preference number: 2 (lower is better)
Translates to: SFALIYTIPTLQDASVETGETVL*QSGPET
Trigger: TGTTTCAGGACCACTTTGCCACAGGACCGTTTCCCC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGAGAATCTGTGGTGGCTaGGTGAAGTATCAAACACCA +
Preference number: 2 (lower is better)
Translates to: RGIWKLILLGFFQQREAERICGG*VKYQTP
Trigger: TGGTGTTTGATACTTCACCCAGCCACCACAGATTCT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGGTCAAAAGAATCTGTaGTGGCTGGGTGAAGTATCA +
Preference number: 2 (lower is better)
Translates to: RGIWKLILLGFFQQREAEGQKNL*WLGEVS
Trigger: TGATACTTCACCCAGCCACCACAGATTCTTTTGACC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGGAAAGGCCACGAATTaGAAGAGGCAAGTACAGCCC +
Preference number: 2 (lower is better)
Translates to: SFALIYTIPTLQDASVETGKATN*KRQVQP
Trigger: GGGCTGTACTTGCCTCTTCCAATTCGTGGCCTTTCC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR TCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGAATAAACAGGAACCTTaGTCGCATCTGTACACAGGA +
Preference number: 2 (lower is better)
Translates to: RGIWKLILLGFFQQREAENKQEP*SHLYTG
Trigger: TCCTGTGTACAGATGCGATCAAGGTTCCTGTTTATT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTACTACCCCATCCCAGTaGGGTTGCTGTACATATCTA +
Preference number: 2 (lower is better)
Translates to: SFALIYTIPTLQDASVETTTPSQ*GCCTYL
Trigger: TAGATATGTACAGCAACCGCACTGGGATGGGGTAGT...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTCCAGCTCAGATGTATTaGTCATTCCTCTTCAGAAGG +
Preference number: 2 (lower is better)
Translates to: SFALIYTIPTLQDASVETPAQMY*SFLFRR
Trigger: CCTTCTGAAGAGGAATGAGCAATACATCTGAGCTGG...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGTGAGATTCTATTTGTaGATTTACCCCCATCATTTA +
Preference number: 2 (lower is better)
Translates to: RGIWKLILLGFFQQREAEVRFYL*IYPHHL
Trigger: TAAATGATGGGGGTAAATGCACAAATAGAATCTCAC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR GCA 72 bp ATAGTCTCCAGTGACTCCTGGCCCCTGTGGCTTCTCTaGCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCT +
Preference number: 3 (lower is better)
Translates to: IVSSDSWPLWLL*LSLTGPVTAGP
Trigger: AGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGGGGCCAGGAGTCACTGGAGACTAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAAGTATCCAGGAGCCCTaGGGGAGCCAGCCCTCCTCC +
Preference number: 3 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRASIQEP*GSQPSS
Trigger: GGAGGAGGGCTGGCTCCCCAAGGGCTCCTGGATACT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGGGAAAGGCCACGAATaGGAAGAGGCAAGTACAGCC +
Preference number: 3 (lower is better)
Translates to: PVASLPEPDGPGDCRASAGKGHE*EEASTA
Trigger: GGCTGTACTTGCCTCTTCCAATTCGTGGCCTTTCCC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 72 bp GGGTGGGGTGGCCTGCCCACCTGTGGAGTGCCAGGATaGGCCCATGACTCAGACTACCAGAGTATCCAGGAG +
Preference number: 3 (lower is better)
Translates to: GWGGLPTCGVPG*AHDSDYQSIQE
Trigger: CTCCTGGATACTCTGGTAGTCTGAGTCATGGGCCCATCCTGGCACTCCACAGGTGGGCAGGCCACCCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAAGTATCCAGGAGCCCTaGGGGAGCCAGCCCTCCTCC +
Preference number: 3 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPSIQEP*GSQPSS
Trigger: GGAGGAGGGCTGGCTCCCCAAGGGCTCCTGGATACT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGCCTTTGTGGGTGGTTaGGTGGTTTTAGAACAGAGG +
Preference number: 3 (lower is better)
Translates to: PVASLPEPDGPGDCRASAAFVGG*VVLEQR
Trigger: CCTCTGTTCTAAAACCACCAAACCACCCACAAAGGC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACCCAGACCTCAGCCCTaGAAGTCTCCAATCCGTGGG +
Preference number: 3 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAPRPQP*KSPIRG
Trigger: CCCACGGATTGGAGACTTCAAGGGCTGAGGTCTGGG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACAGTATCCAGGAGCCCTaGGGGAGCCAGCCCTCCTCC +
Preference number: 3 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDSIQEP*GSQPSS
Trigger: GGAGGAGGGCTGGCTCCCCAAGGGCTCCTGGATACT...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGGCTTGCTGCTTCTCTaGGGGAGGATGAGAGCCCTA +
Preference number: 3 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAGLLLL*GRMRAL
Trigger: TAGGGCTCTCATCCTCCCCAAGAGAAGCAGCAAGCC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCCCAGACCTCAGCCCTaGAAGTCTCCAATCCGTGGG +
Preference number: 3 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAPRPQP*KSPIRG
Trigger: CCCACGGATTGGAGACTTCAAGGGCTGAGGTCTGGG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCAGACCTCAGCCCTaGAAGTCTCCAATCCGTGGG +
Preference number: 3 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPPRPQP*KSPIRG
Trigger: CCCACGGATTGGAGACTTCAAGGGCTGAGGTCTGGG...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR TCA 72 bp AGGGCGTGCATGGGGCGAGCGTCTTTCTCCAAATCATaGAGGTGTACCTGTGGGCTGGGGGCTCTGTGCGCA +
Preference number: 3 (lower is better)
Translates to: RACMGRASFSKS*RCTCGLGALCA
Trigger: TGCGCACAGAGCCCCCAGCCCACAGGTACACCTTCATGATTTGGAGAAAGACGCTCGCCCCATGCACGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR GCA 72 bp ACCCAGTCTCAGGAACGGCCGCTAGGGCTCGGGCCCTaGCACTTCTGCCTTTGTGGGTGGTTTGGTGGTTTT +
Preference number: 3 (lower is better)
Translates to: TQSQERPLGLGP*HFCLCGWFGGF
Trigger: AAAACCACCAAACCACCCACAAAGGCAGAAGTGGCAGGGCCCGAGCCCTAGCGGCCGTTCCTGAGACTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR GCA 72 bp CAGGAACGGCCGCTAGGGCTCGGGCCCTGCCACTTCTaGCTTTGTGGGTGGTTTGGTGGTTTTAGAACAGAG +
Preference number: 3 (lower is better)
Translates to: QERPLGLGPCHF*LCGWFGGFRTE
Trigger: CTCTGTTCTAAAACCACCAAACCACCCACAAAGGCAGAAGTGGCAGGGCCCGAGCCCTAGCGGCCGTTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR GCA 72 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTaGCCAGTGACATATACCCAGGCTGGTGGCATTGGT +
Preference number: 3 (lower is better)
Translates to: SGTRVRRRGLEL*PVTYTQAGGIG
Trigger: ACCAATGCCACCAGCCTGGGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 72 bp GGGGTTAGAGCTGTGCCCAGTGACATATACCCAGGCTaGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATC +
Preference number: 3 (lower is better)
Translates to: GVRAVPSDIYPG*WHWFCPSGHGI
Trigger: GATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCCTGGGTATATGTCACTGGGCACAGCTCTAACCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCCCTGGGGCAGGCACTaGATTCACACAGCCTGGCTG +
Preference number: 3 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWPWGRH*IHTAWL
Trigger: CAGCCAGGCTGTGTGAATCAAGTGCCTGCCCCAGGG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGGCTTGCTGCTTCTCTaGGGGAGGATGAGAGCCCTA +
Preference number: 3 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDGLLLL*GRMRAL
Trigger: TAGGGCTCTCATCCTCCCCAAGAGAAGCAGCAAGCC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGGCTTGCTGCTTCTCTaGGGGAGGATGAGAGCCCTA +
Preference number: 3 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTGLLLL*GRMRAL
Trigger: TAGGGCTCTCATCCTCCCCAAGAGAAGCAGCAAGCC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCATGGGGCAGGAAGAGCTaGCCCAGGCAGATTTCTAAC +
Preference number: 3 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPWGRKS*PRQISN
Trigger: GTTAGAAATCTGCCTGGGCAAGCTCTTCCTGCCCCA...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGGCTGGAAACGTCTGTaGCTGGACACTGGAAGCCAG +
Preference number: 3 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPGWKRL*LDTGSQ
Trigger: CTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACTGCCACTTCTGCCTTaGTGGGTGGTTTGGTGGTTT +
Preference number: 3 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPLPLLP*WVVWWF
Trigger: AAACCACCAAACCACCCACAAAGGCAGAAGTGGCAG...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAATCCACCAGCCACAGTaGTGGGTATTTCCTTGGGGT +
Preference number: 3 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPIHQPQ*WVFPWG
Trigger: ACCCCAAGGAAATACCCACAACTGTGGCTGGTGGAT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGGGAAAGGCCACGAATaGGAAGAGGCAAGTACAGCC +
Preference number: 3 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDGKGHE*EEASTA
Trigger: GGCTGTACTTGCCTCTTCCAATTCGTGGCCTTTCCC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACTGGGGCAGGAAGAGCTaGCCCAGGCAGATTTCTAAC +
Preference number: 3 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDWGRKS*PRQISN
Trigger: GTTAGAAATCTGCCTGGGCAAGCTCTTCCTGCCCCA...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTGGGGCAGGAAGAGCTaGCCCAGGCAGATTTCTAAC +
Preference number: 3 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRWGRKS*PRQISN
Trigger: GTTAGAAATCTGCCTGGGCAAGCTCTTCCTGCCCCA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR TCA 72 bp AACTGCATACATGGGAAGGTACAACAGATGGGGCCGTaGGAGCTCCTGGACGGAGGGACAGATGGGGCTGAG +
Preference number: 3 (lower is better)
Translates to: NCIHGKVQQMGP*ELLDGGTDGAE
Trigger: CTCAGCCCCATCTGTCCCTCCGTCCAGGAGCTCTCACGGCCCCATCTGTTGTACCTTCCCATGTATGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR TCA 72 bp GGCAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTaGAACCTCGACCAGTTGGTTCCTCCCCCACTGCCC +
Preference number: 3 (lower is better)
Translates to: GKDSPTKGKVWL*NLDQLVPPPLP
Trigger: GGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 72 bp CAAACAGGTCCAGGCCGTATCCACCAGCCACAGTTGTaGGTATTTCCTTGGGGTAGTGGAGACAGGGGCAGG +
Preference number: 3 (lower is better)
Translates to: QTGPGRIHQPQL*VFPWGSGDRGR
Trigger: CCTGCCCCTGTCTCCACTACCCCAAGGAAATACCCACAACTGTGGCTGGTGGATACGGCCTGGACCTGTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 72 bp CATTTAGAAATAGTCTCCAGTGACTCCTGGCCCCTGTaGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACT +
Preference number: 3 (lower is better)
Translates to: HLEIVSSDSWPL*LLCLSLTGPVT
Trigger: AGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGGGGCCAGGAGTCACTGGAGACTATTTCTAAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 72 bp CATATACCCAGGCTGGTGGCATTGGTTCTGTCCCTCTaGGCACGGCATCAATGTGGAGGCAGCCCTTTGGTG +
Preference number: 3 (lower is better)
Translates to: HIPRLVALVLSL*ARHQCGGSPLV
Trigger: CACCAAAGGGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCCTGGGTATATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 72 bp GCTGTGCCCAGTGACATATACCCAGGCTGGTGGCATTaGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAG +
Preference number: 3 (lower is better)
Translates to: AVPSDIYPGWWH*FCPSGHGINVE
Trigger: CTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCCTGGGTATATGTCACTGGGCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 72 bp CGTCTTTCTCCAAATCATGAAGGTGTACCTGTGGGCTaGGGGCTCTGTGCGCAGAGGAGCGGGACTAGAGTC +
Preference number: 3 (lower is better)
Translates to: RLSPNHEGVPVG*GLCAQRSGTRV
Trigger: GACTCTAGTCCCGCTCCTCTGCGCACAGAGCCCCCAGCCCACAGGTACACCTTCATGATTTGGAGAAAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 72 bp ATTGCCAAGGGTGAAAGGCATCGTGGAGCGCAGGCCTaGGGGGCAAGGACTCACCAACCAAAGGCAAGGTTT +
Preference number: 3 (lower is better)
Translates to: IAKGERHRGAQA*GARTHQPKARF
Trigger: AAACCTTGCCTTTGGTTGGTGAGTCCTTGCCCCCCAGGCCTGCGCTCCACGATGCCTTTCACCCTTGGCAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCTGCCACTTCTGCCTTaGTGGGTGGTTTGGTGGTTT +
Preference number: 3 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDLPLLP*WVVWWF
Trigger: AAACCACCAAACCACCCACAAAGGCAGAAGTGGCAG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAATCCACCAGCCACAGTaGTGGGTATTTCCTTGGGGT +
Preference number: 3 (lower is better)
Translates to: GTGFRELSSPGHTADRSPIHQPQ*WVFPWG
Trigger: ACCCCAAGGAAATACCCACAACTGTGGCTGGTGGAT...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 72 bp GCACAGGTAACTGCATACATGGGAAGGTACAACAGATaGGGCCGTGAGAGCTCCTGGACGGAGGGACAGATG +
Preference number: 3 (lower is better)
Translates to: AQVTAYMGRYNR*GRESSWTEGQM
Trigger: CATCTGTCCCTCCGTCCAGGAGCTCTCACGGCCCCATCTGTTGTACCTTCCCATGTATGCAGTTACCTGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 72 bp CTAGGGCTCGGGCCCTGCCACTTCTGCCTTTGTGGGTaGTTTGGTGGTTTTAGAACAGAGGAGGCAACAGGA +
Preference number: 3 (lower is better)
Translates to: LGLGPCHFCLCG*FGGFRTEEATG
Trigger: TCCTGTTGCCTCCTCTGTTCTAAAACCACCAAACCACCCACAAAGGCAGAAGTGGCAGGGCCCGAGCCCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGCTGCCACTTCTGCCTTaGTGGGTGGTTTGGTGGTTT +
Preference number: 3 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGLPLLP*WVVWWF
Trigger: AAACCACCAAACCACCCACAAAGGCAGAAGTGGCAG...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCATGTGGAGGCAGCCCTTaGGTGAGATTCTATTTGTGC +
Preference number: 3 (lower is better)
Translates to: GTGFRELSSPGHTADRSPCGGSP*VRFYLC
Trigger: GCACAAATAGAATCTCACCAAAGGGCTGCCTCCACA...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACTGTGGAGGCAGCCCTTaGGTGAGATTCTATTTGTGC +
Preference number: 3 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDCGGSP*VRFYLC
Trigger: GCACAAATAGAATCTCACCAAAGGGCTGCCTCCACA...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 72 bp TGTCTAGTAGGGACCAAGCAGGGAAAGGCCACGAATTaGAAGAGGCAAGTACAGCCCCGCACAGGGAACTCA +
Preference number: 3 (lower is better)
Translates to: CLVGTKQGKATN*KRQVQPRTGNS
Trigger: TGAGTTCCCTGTGCGGGGCTGTACTTGCCTCTTCCAATTCGTGGCCTTTCCCTGCTTGGTCCCTACTAGACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 72 bp AGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATaGACAGTGTGGTCCAGGCTGGGCTTGCTGCTTCTC +
Preference number: 3 (lower is better)
Translates to: RSHFLSGHCPAI*TVWSRLGLLLL
Trigger: GAGAAGCAGCAAGCCCAGCCTGGACCACACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR TCA 72 bp AGGAAGAGCTTGCCCAGGCAGATTTCTAACCTGGGCTaGAGCAATGCCCTTTATGCAGCTCCCAGACCTCAG +
Preference number: 3 (lower is better)
Translates to: RKSLPRQISNLG*SNALYAAPRPQ
Trigger: CTGAGGTCTGGGAGCTGCATAAAGGGCATTGCTTCAGCCCAGGTTAGAAATCTGCCTGGGCAAGCTCTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTTGGTGAGATTCTATTaGTGCATTTACCCCCATCAT +
Preference number: 3 (lower is better)
Translates to: GWWHWFCPSGHGINVEAALVRFY*CIYPHH
Trigger: ATGATGGGGGTAAATGCACAAATAGAATCTCACCAA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGGCTGGAAACGTCTGTaGCTGGACACTGGAAGCCAG +
Preference number: 3 (lower is better)
Translates to: RHWLTLIALENSNELGQFGWKRL*LDTGSQ
Trigger: CTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCCCTGGGGCAGGCACTaGATTCACACAGCCTGGCTG +
Preference number: 3 (lower is better)
Translates to: RGIWKLILLGFFQQREAEPWGRH*IHTAWL
Trigger: CAGCCAGGCTGTGTGAATCAAGTGCCTGCCCCAGGG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCGGCTGCACTGTTCATaGCTAGGCTGCCCAGGGAGG +
Preference number: 3 (lower is better)
Translates to: RGIWKLILLGFFQQREAERLHCS*LGCPGR
Trigger: CCTCCCTGGGCAGCCTAGCAATGAACAGTGCAGCCG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCTTGGTGAGATTCTATTaGTGCATTTACCCCCATCAT +
Preference number: 3 (lower is better)
Translates to: LYRGMATPRISTEHVAGILVRFY*CIYPHH
Trigger: ATGATGGGGGTAAATGCACAAATAGAATCTCACCAA...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 72 bp CACTGTTCATTGCTAGGCTGCCCAGGGAGGAAACCTTaGGTGGGTAGGCTGTTTGAGTACAGGGAGAAAAAT +
Preference number: 3 (lower is better)
Translates to: HCSLLGCPGRKP*VGRLFEYREKN
Trigger: ATTTTTCTCCCTGTACTCAAACAGCCTACCCACCCAAGGTTTCCTCCCTGGGCAGCCTAGCAATGAACAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCTCACACTGATTGCTTaGGAGAATTCCAACGAGTTA +
Preference number: 3 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWLTLIA*ENSNEL
Trigger: TAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGGAAAGGCCACGAATaGGAAGAGGCAAGTACAGCC +
Preference number: 3 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGKGHE*EEASTA
Trigger: GGCTGTACTTGCCTCTTCCAATTCGTGGCCTTTCCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 72 bp CAGGAAATGCAGGGCAGCTTCTTGAAAGTAGAGATGTaGGTAAGGAAGAGGCACTGGCTCACACTGATTGCT +
Preference number: 3 (lower is better)
Translates to: QEMQGSFLKVEM*VRKRHWLTLIA
Trigger: AGCAATCAGTGTGAGCCAGTGCCTCTTCCTTACCCACATCTCTACTTTCAAGAAGCTGCCCTGCATTTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 72 bp GGAAAGCAGACTGGATTCACAACACAGAAGCAGAATTaGTGGAACAGGCTTTCGGGAACTTTCTTCCCCTGG +
Preference number: 3 (lower is better)
Translates to: GKQTGFTTQKQN*WNRLSGTFFPW
Trigger: CCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTCTGCTTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCATCCACCAGCCACAGTaGTGGGTATTTCCTTGGGGT +
Preference number: 3 (lower is better)
Translates to: RHWLTLIALENSNELGQFIHQPQ*WVFPWG
Trigger: ACCCCAAGGAAATACCCACAACTGTGGCTGGTGGAT...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR GCA 72 bp ATCGGTCCCCAAGGACAGGTGCTCAGCCAGGACTTTTaGTTTAAGAAGGATTTGTCTGGAGAAAGGACTAGA +
Preference number: 3 (lower is better)
Translates to: IGPQGQVLSQDF*FKKDLSGERTR
Trigger: TCTAGTCCTTTCTCCAGACAAATCCTTCTTAAAGCAAAAGTCCTGGCTGAGCACCTGTCCTTGGGGACCGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CCA 72 bp AAGCAGACTGGATTCACAACACAGAAGCAGAATTGGTaGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCA +
Preference number: 3 (lower is better)
Translates to: KQTGFTTQKQNW*NRLSGTFFPWS
Trigger: TGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGCCTTTGTGGGTGGTTaGGTGGTTTTAGAACAGAGG +
Preference number: 3 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFAFVGG*VVLEQR
Trigger: CCTCTGTTCTAAAACCACCAAACCACCCACAAAGGC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTGTGGAGGCAGCCCTTaGGTGAGATTCTATTTGTGC +
Preference number: 3 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFCGGSP*VRFYLC
Trigger: GCACAAATAGAATCTCACCAAAGGGCTGCCTCCACA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTTACAAAGTAGAGTTTaGCCCCAGGAAATGCAGGGC +
Preference number: 3 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFLQSRV*PQEMQG
Trigger: GCCCTGCATTTCCTGGGGCAAAACTCTACTTTGTAA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR GCA 72 bp GATGTGGGTAAGGAAGAGGCACTGGCTCACACTGATTaGTTTGGAGAATTCCAACGAGTTAGGACAATTCAA +
Preference number: 3 (lower is better)
Translates to: DVGKEEALAHTD*FGEFQRVRTIQ
Trigger: TTGAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCTCTTCCTTACCCACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCTCACACTGATTGCTTaGGAGAATTCCAACGAGTTA +
Preference number: 3 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFLTLIA*ENSNEL
Trigger: TAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR-3UTR CAA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTTACAAAGTAGAGTTTaGCCCCAGGAAATGCAGGGC +
Preference number: 3 (lower is better)
Translates to: RGIWKLILLGFFQQREAELQSRV*PQEMQG
Trigger: GCCCTGCATTTCCTGGGGCAAAACTCTACTTTGTAA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR GCA 72 bp CAATGTGGAGGCAGCCCTTTGGTGAGATTCTATTTGTaGATTTACCCCCATCATTTAGAAATAGTCTCCAGT +
Preference number: 3 (lower is better)
Translates to: QCGGSPLVRFYL*IYPHHLEIVSS
Trigger: ACTGGAGACTATTTCTAAATGATGGGGGTAAATGCACAAATAGAATCTCACCAAAGGGCTGCCTCCACATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCTCCAGTCAGGAGGCCTaGCCGGGCCTCCGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASASSQEA*PGLRRS
Trigger: GGACCGGCGGAGGCCCGGGCAGGCCTCCTGACTGGA...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCCCGCAGTGCATGTGGTaGGCCAGGCGGGGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAPQCMW*ARRGRL
Trigger: GAGGCGCCCCCGCCTGGCCCACCACATGCACTGCGG...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCAGCCCACAGAGCTGCTaGGGTCCAGCGGCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASASPQSC*GPAAGW
Trigger: CCACCCCGCCGCTGGACCGCAGCAGCTCTGTGGGCT...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCAGGTGGGCTTGGGGCTaGGGCCTGTGGTTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASARWAWG*GLWFSG
Trigger: GCCCGAGAACCACAGGCCTCAGCCCCAAGCCCACCT...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGGGTTGAGCCCAGAGTaGGAGCCACAGGTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAGLSPE*EPQVRA
Trigger: CGCCCGCACCTGTGGCTCTCACTCTGGGCTCAACCC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCCCCCTGTGGCTTCTCTaGCTGAGCCTGACGGGCCCG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAPLWLL*LSLTGP
Trigger: CGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGGGG...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
71% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGCTGCGCCTGGACAGTaGGCTCCGCCTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAAAPGQ*APPWLH
Trigger: GTGAAGCCAAGGCGGAGCTCACTGTCCAGGCGCAGC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCAGGCGACACGGAGGCTaGCGAGCTCTCAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASARRHGG*RALSGT
Trigger: AGTCCCACTGAGAGCTCGTCAGCCTCCGTGTCGCCT...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGGCAGCCCACAGAGCTaGTGCGGTCCAGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAGSPQS*CGPAAG
Trigger: CCCCGCCGCTGGACCGCAGCAGCTCTGTGGGCTGCC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCCCAGAGCCCCCGGTCTaGTGCTTTGTAGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAPEPPV*CFVGLG
Trigger: CCCCAGACCTACAAAGCAGCAGACCGGGGGCTCTGG...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCTGCCACGCTGGATGCTaGGGGTGGCTCTTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASACHAGC*GWLFSP
Trigger: AGGGGAGAAGAGCCACCCCCAGCATCCAGCGTGGCA...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGGGGCTAAGAGCTCTTaGGCGGGGCTCTCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAGAKSS*AGLSWV
Trigger: CACCCAAGAGAGCCCCGCCCAAGAGCTCTTAGCCCC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGCACGGGTCAAGTGCTaGGAGTGCAGAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAARVKC*ECRGRW
Trigger: CCACCTGCCTCTGCACTCCCAGCACTTGACCCGTGC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGAGAGCCCTAGTCTCTaGGGGAAGCAGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAESPSL*GKQPGA
Trigger: AGCTCCTGGCTGCTTCCCTCAGAGACTAGGGCTCTC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCCAGAGAGCTCGGAGGTaGCAAGGAGGGGAGATCAGG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAQRARR*QGGEIR
Trigger: CCTGATCTCCCCTCCTTGGCACCTCCGAGCTCTCTG...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAAGCCCACAGAGCTGCTaGGGTCCAGCGGCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRASPQSC*GPAAGW
Trigger: CCACCCCGCCGCTGGACCGCAGCAGCTCTGTGGGCT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCTTACGGAGGCGACAGTaGAGGCAGCTGGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASALRRRQ*RQLAAV
Trigger: GACAGCAGCCAGCTGCCTGCACTGTCGCCTCCGTAA...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGAATGGCCTCTCCTTTaGTCAGCCGCTTCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAEWPLL*SAASGD
Trigger: GTCCCCGGAAGCGGCTGACCAAAGGAGAGGCCATTC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGGCTGTGCGTGGGTGTaGGCTCTGCAGGTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAGCAWV*ALQVPR
Trigger: CCGGGGCACCTGCAGAGCCCACACCCACGCACAGCC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACTGCCTGCTGGGGCCTaGGTGGGGGTCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRALPAGA*VGVTCL
Trigger: CAGGCAGGTGACCCCCACCCAGGCCCCAGCAGGCAG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAAGGCGGGGGCGCCTCTaGGGATGGTCTGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRARRGRL*GWSGQL
Trigger: GAGCTGTCCAGACCATCCTCAGAGGCGCCCCCGCCT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACGGGAGGAGAGAGGATaGGCAGGGCCGGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAREERG*AGPGEQ
Trigger: CTGCTCACCCGGCCCTGCTCATCCTCTCTCCTCCCG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACTCGGGGTTGGTCGGTaGACGCGGGGACTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRALGVGR*TRGLQA
Trigger: CGCTTGGAGTCCCCGCGTGCACCGACCAACCCCGAG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCTGCCAAGTCAGCCACTaGCTCCTCTGCTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASACQVSH*LLCCFP
Trigger: AGGGAAGCAGCAGAGGAGGCAGTGGCTGACTTGGCA...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATGGGCGGGGCTCTCTTaGGTGGCAGCTGTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAWAGLS*VAAVPL
Trigger: CAGCGGCACAGCTGCCACCCAAGAGAGCCCCGCCCA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGTCCACCATGTGAGGTaGCCGCAGAGGAAATCTGGG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAVHHVR*PQRKSG
Trigger: CCCAGATTTCCTCTGCGGCCACCTCACATGGTGGAC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGTTCCTCGTCCGGGCTaGGAAGCGGGCAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAVPRPG*EAGRGL
Trigger: GAGGCCTCTGCCCGCTTCCCAGCCCGGACGAGGAAC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCAGAGAGGCTAAGCGTTaGGGGGAACCCTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAREAKR*GEPCPQ
Trigger: CTGAGGACAGGGTTCCCCCCAACGCTTAGCCTCTCT...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGGTCTGGCTGCAGGCTaGACTGTGGCTGGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAGLAAG*TVAGLS
Trigger: AGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGATTCCCCAGAACCCTaGAGCACAGTGGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASADSPEP*STVDSQ
Trigger: CTGGGAGTCCACTGTGCTCCAGGGTTCTGGGGAATC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGGGAGCAGAGAGGAGTaGGGTTACTACCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAGSREE*GYYPGW
Trigger: CCATCCTGGGTAGTAACCCCACTCCTCTCTGCTCCC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCCCAGCCCCTTCTTCATaGATTATTCCGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAPAPSS*IIPARQ
Trigger: CTGCCTGGCCGGAATAATTCATGAAGAAGGGGCTGG...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372583.6
ENST00000372584.5
CDS-3UTR TCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGGGCTTCGGAGTCGGTaGTATGGTCATCGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAGLRSR*YGHRRS
Trigger: ACTCCTTCGATGACCATATCACCGACTCCGAAGCCC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGTCCGTACCTTCTTGTaGCTTGGCTGGTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAVRTFL*LGWSGG
Trigger: TCCTCCAGACCAGCCAAGTCACAAGAAGGTACGGAC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCTTCCGGGGAAACCAGTaGAGGGAGGTGAACCTCTGT +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAFRGNQ*REVNLC
Trigger: ACAGAGGTTCACCTCCCTTCACTGGTTTCCCCGGAA...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACAACAGATGGGGCCGTaGGAGCTCCTGGACGGAGGG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAQQMGP*ELLDGG
Trigger: CCCTCCGTCCAGGAGCTCTCACGGCCCCATCTGTTG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCCAGATGGCCCGGGGCTaGCAAACTGACTTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAQMARG*QTDFLW
Trigger: CCACAAAAAGTCAGTTTGGCAGCCCCGGGCCATCTG...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACTTCCTGGGTCCACGTaGAGGCCAGGTGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRALPGST*RPGGLG
Trigger: CCCAAGCCCACCTGGCCTGCACGTGGACCCAGGAAG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTCCAGTCAGGAGGCCTaGCCGGGCCTCCGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTSSQEA*PGLRRS
Trigger: GGACCGGCGGAGGCCCGGGCAGGCCTCCTGACTGGA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGCTGGCAGTGGCAGGTaGCCCCCACGAGTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPAGSGR*PPRVPR
Trigger: ACGGGGGACTCGTGGGGGCCACCTGCCACTGCCAGC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGGAGCACGCTGGGCTTaGCACAGGGCCGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAGARWA*HRAGCS
Trigger: ACTGCAGCCGGCCCTGTGCCAAGCCCAGCGTGCTCC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGGGTGCCTGCAGAGATaGGCTTTGCGATCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAGCLQR*ALRSEA
Trigger: AGCTTCAGATCGCAAAGCCCATCTCTGCAGGCACCC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCCAGAGGACTCGAAGCTaGACTCCCCTGATGATTGGG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAQRTRS*TPLMIG
Trigger: CCCAATCATCAGGGGAGTCCAGCTTCGAGTCCTCTG...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGAGATGGAGTTGGCCTaGGTGCAGAACAGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAEMELA*VQNSRL
Trigger: CAGCCTACTGTTCTGCACCCAGGCCAACTCCATCTC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGAGCTGCCTTGGGACTaGGTGACCAAGATCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAELPWD*VTKIWE
Trigger: TTCCCAGATCTTGGTCACCCAGTCCCAAGGCAGCTC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCCGCAGTGCATGTGGTaGGCCAGGCGGGGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRPQCMW*ARRGRL
Trigger: GAGGCGCCCCCGCCTGGCCCACCACATGCACTGCGG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTGCCCGCAGTGCATGTaGTGGGCCAGGCGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRCPQCM*WARRGR
Trigger: GCGCCCCCGCCTGGCCCACCACATGCACTGCGGGCA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGGTCCAGCGGCGGGGTaGCAGAAGGCTCGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPGPAAG*QKARGW
Trigger: CCAACCCCGAGCCTTCTGCCACCCCGCCGCTGGACC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGGCCGTGAGAGCTCCTaGACGGAGGGACAGATGGGG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAGRESS*TEGQMG
Trigger: CCCCATCTGTCCCTCCGTCCAGGAGCTCTCACGGCC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACCTCGGTCAGGGGCTTaGGAGCCAGGGACGGACAGT +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAPRSGA*EPGTDS
Trigger: ACTGTCCGTCCCTGGCTCCCAAGCCCCTGACCGAGG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGCAATATGGACAGTGTaGTCCAGGCTGGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAAIWTV*SRLGLL
Trigger: CAGCAAGCCCAGCCTGGACCACACTGTCCATATTGC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGAGGCTCCGCTGCTCTaGGCTGGGCTGCGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIEAPLL*AGLRRA
Trigger: AGCGCGGCGCAGCCCAGCCCAGAGCAGCGGAGCCTC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCTGGCCCGTTTTCTCCTaGGAGCCTTCCCTAAGAACT +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAWPVFS*EPSLRT
Trigger: AGTTCTTAGGGAAGGCTCTCAGGAGAAAACGGGCCA...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATTAGGCTGCAGGGAGTaGGCAGAGCGTCCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRALGCRE*AERPCG
Trigger: CCCACACGGACGCTCTGCTCACTCCCTGCAGCCTAA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAAGGAAGGGGGCTGCCTaGAGGGGATGTTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRARKGAA*RGCWLG
Trigger: ACCCAGCCAACATCCCCTTCAGGCAGCCCCCTTCCT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAAGGGCCCAGGATGGGTaGGGAGTCTGCCCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPRAQDG*GVCPQC
Trigger: GCACTGCGGGCAGACTCCTCACCCATCCTGGGCCCT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCCTTGTAGCTCAAGGCTaGGCCTGTGTCTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASALVAQG*ACVFLH
Trigger: GTGGAGAAAGACACAGGCTCAGCCTTGAGCTACAAG...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAAGGTGGGCTTGGGGCTaGGGCCTGTGGTTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPRWAWG*GLWFSG
Trigger: GCCCGAGAACCACAGGCCTCAGCCCCAAGCCCACCT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCATGAGCAGGGCCGGGTaGGCAGGAGGGACTTCGGGA +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAMSRAG*AGGTSG
Trigger: TCCCGAAGTCCCTCCTGCTCACCCGGCCCTGCTCAT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGAGGCAACAGGAGAGTaGGGCCTCGGTCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAEATGE*GLGQGL
Trigger: AAGCCCCTGACCGAGGCCTCACTCTCCTGTTGCCTC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGGGTTGAGCCCAGAGTaGGAGCCACAGGTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPGLSPE*EPQVRA
Trigger: CGCCCGCACCTGTGGCTCTCACTCTGGGCTCAACCC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGAGGGTTGCAGGGGTTaGGCCCAGAGTGAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAEGCRG*AQSESH
Trigger: GTGGCTCTCACTCTGGGCTCAACCCCTGCAACCCTC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCCTGCCCTGGGCCCTTaGCTCCCGGGGGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTPALGP*LPGVHH
Trigger: ATGGTGGACCCCCGGGAGGCAAGGGCCCAGGGCAGG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACCTGCCCTGGGCCCTTaGCTCCCGGGGGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPPALGP*LPGVHH
Trigger: ATGGTGGACCCCCGGGAGGCAAGGGCCCAGGGCAGG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCCTGCCCTGGGCCCTTaGCTCCCGGGGGTCCACCAT +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDPALGP*LPGVHH
Trigger: ATGGTGGACCCCCGGGAGGCAAGGGCCCAGGGCAGG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCACCAGGGAGCTGAAGTaGAAACTGGGATTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASATRELK*KLGLQR
Trigger: CCTCTGCAATCCCAGTTTGCACTTCAGCTCCCTGGT...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCAAGGGTGGTGTACATTaGGCTCCCATAGGACGGCAT +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAKGGVH*APIGRH
Trigger: ATGCCGTCCTATGGGAGCGCAATGTACACCACCCTT...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCTTTGGAGAGCACATGTaGTCGAGGGGCCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAFGEHM*SRGQFS
Trigger: AGAGAACTGGCCCCTCGAGCACATGTGCTCTCCAAA...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACGTGGGTGTGGGCTCTaGAGGTGCCCCGGTCCCATG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPRGCGL*RCPGPM
Trigger: CATGGGACCGGGGCACCTGCAGAGCCCACACCCACG...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCTGTGGCTTCTCTaGCTGAGCCTGACGGGCCCG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPPLWLL*LSLTGP
Trigger: CGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGGGG...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGAGGGGCGGGCTTGCTTaGCCAGGACCCCGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRRGGLA*PGPREA
Trigger: AGCCTCGCGGGGTCCTGGCCAAGCAAGCCCGCCCCT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAAGCTGGGCAAGTGTCTaGCTGCGCTGGGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRASWASV*LRWGHW
Trigger: CCAATGGCCCCAGCGCAGCCAGACACTTGCCCAGCT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCTTTCTTCACGCTCAGTaGGGTCAACCCTCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAFLHAQ*GQPSSV
Trigger: CACCGAAGAGGGTTGACCCCACTGAGCGTGAAGAAA...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGCGGAGCTGTGGCCATaGTGTATGTCTCTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAAELWP*CMSLCS
Trigger: TGAGCAAAGAGACATACACCATGGCCACAGCTCCGC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCCAGGATGCGGAGCTGTaGCCATGGTGTATGTCTCTT +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAQDAEL*PWCMSL
Trigger: AAGAGACATACACCATGGCCACAGCTCCGCATCCTG...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGCCGGCTCCCCTCTCTaGGAGGCAGGAGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPAGSPL*EAGASS
Trigger: GGAGGATGCTCCTGCCTCCCAGAGAGGGGAGCCGGC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCTGCCCGCAGTGCATGTaGTGGGCCAGGCGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPCPQCM*WARRGR
Trigger: GCGCCCCCGCCTGGCCCACCACATGCACTGCGGGCA...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTGGTGGGCGAGTATCTaGGGAGGCCTGGGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAWWASI*GGLGRW
Trigger: CCACCGACCCAGGCCTCCCCAGATACTCGCCCACCA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGCACGGGTCAAGTGCTaGGAGTGCAGAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAARVKC*ECRGRW
Trigger: CCACCTGCCTCTGCACTCCCAGCACTTGACCCGTGC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGGCTGTGCGTGGGTGTaGGCTCTGCAGGTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDGCAWV*ALQVPR
Trigger: CCGGGGCACCTGCAGAGCCCACACCCACGCACAGCC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGGTCCAGCGGCGGGGTaGCAGAAGGCTCGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDGPAAG*QKARGW
Trigger: CCAACCCCGAGCCTTCTGCCACCCCGCCGCTGGACC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCAGGCTGGACTGTGGCTaGTTTGTCTGTCTAGTAGGG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASARLDCG*FVCLVG
Trigger: CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCT...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCAGGTGGGCTTGGGGCTaGGGCCTGTGGTTCTCGGGC +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTRWAWG*GLWFSG
Trigger: GCCCGAGAACCACAGGCCTCAGCCCCAAGCCCACCT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCTGCTGAGGAGCTTGTaGGGTAGAGGCGCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDLLRSL*GRGAGG
Trigger: CCCGCCCGCGCCTCTACCTCACAAGCTCCTCAGCAG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCAGGCGACACGGAGGCTaGCGAGCTCTCAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAARRHGG*RALSGT
Trigger: AGTCCCACTGAGAGCTCGTCAGCCTCCGTGTCGCCT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACTGGAGAGAAGGGGCTaGTTGGGTCTTGGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRALERRG*LGLGES
Trigger: GCTCTCCCCAAGACCCAAGCAGCCCCTTCTCTCCAG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGGGACTCCATGCTGCTaGGCCTGGACAGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAGTPCC*AWTVSS
Trigger: GGAGCTCACTGTCCAGGCGCAGCAGCATGGAGTCCC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCAATGGGGGCCTGTCCTaGCCTGGGCCCTTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGINGGLS*PGPLPP
Trigger: GGGAGGCAAGGGCCCAGGGCAGGACAGGCCCCCATT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCCTCTTCGGTGAGGTTTaGCAGATGGCTGGGGATATT +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASALFGEV*QMAGDI
Trigger: AATATCCCCAGCCATCTGGCAAACCTCACCGAAGAG...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCAAGGGAGAGCGCCCATaGCCCTTCCTGGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAKGERP*PFLGPR
Trigger: ACGTGGACCCAGGAAGGGGCATGGGCGCTCTCCCTT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGCCCAAGCCTGGGCCATaGTCCCCCGCTGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGPKPGP*SPAEGL
Trigger: CAGCCCCTCAGCGGGGGAGCATGGCCCAGGCTTGGG...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGCTCCTGGCCGGGCCTaGACCATCTGGATCCCACCG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDAPGRA*TIWIPP
Trigger: CGGTGGGATCCAGATGGTGCAGGCCCGGCCAGGAGC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCCCCCTGTCAGGTCGCTaGCACCCCCGGAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIPLSGR*HPRRSH
Trigger: GTGGCTTCTCCGGGGGTGGCAGCGACCTGACAGGGG...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGGCTTGGGGGAGTCCTaGCTGGTCCTGGGTTCCCCG +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPGLGES*LVLGSP
Trigger: CGGGGAACCCAGGACCAGGCAGGACTCCCCCAAGCC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACTCTGGGGTGGGTGGCTaGCAACCACAGCGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDSGVGG*QPQRGG
Trigger: CCCTCCCCGCTGTGGTTGGCAGCCACCCACCCCAGA...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATGCCCACCTGTGGAGTaGCAGGATGGGCCCATGACT +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRACPPVE*QDGPMT
Trigger: AGTCATGGGCCCATCCTGGCACTCCACAGGTGGGCA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGTGCAGGCAGCTGGCTaGTGTCGGGCTCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDVQAAG*CRAPGG
Trigger: CCCTCCAGGAGCCCGACAGCAGCCAGCTGCCTGCAC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTGCTCTGGGCTGGGCTaGGCCGCGCTGGACTGGGCT +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGCSGLG*AALDWA
Trigger: AGCCCAGTCCAGCGCGGCGCAGCCCAGCCCAGAGCA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCGGGGCTCTCTTGGGTaGCAGCTGTGCCGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDRGSLG*QLCRCL
Trigger: CAGGCAGCGGCACAGCTGCCACCCAAGAGAGCCCCG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCATGGGCGGGGCTCTCTTaGGTGGCAGCTGTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPWAGLS*VAAVPL
Trigger: CAGCGGCACAGCTGCCACCCAAGAGAGCCCCGCCCA...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGTGACTGGGCTGTGCTaGACTGGGACAGGGAACAGC +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAVTGLC*TGTGNS
Trigger: GCTGTTCCCTGTCCCAGTCCAGCACAGCCCAGTCAC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCGCTGTCGATCTCGCTaGTGTCCACCACGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAARCRSR*CPPRPR
Trigger: ACGAGGCCGTGGTGGACACCAGCGAGATCGACAGCG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCCATGCTGCTGCGCCTaGACAGTGAGCTCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAPCCCA*TVSSAL
Trigger: CAAGGCGGAGCTCACTGTCCAGGCGCAGCAGCATGG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTTGGGAGTCCTTGGCTaGAAGCCCGTGGGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAALGVLG*KPVGPS
Trigger: GGAGGGACCCACGGGCTTCCAGCCAAGGACTCCCAA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAAACCGGACCCTGGCTTaGGAGTCCTTGGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRANRTLA*ESLAGS
Trigger: GCTTCCAGCCAAGGACTCCCAAGCCAGGGTCCGGTT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGCCGCAGAGGAAATCTaGGACAATGAGCTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAAAEEI*DNELLA
Trigger: TGCCAAAAGCTCATTGTCCCAGATTTCCTCTGCGGC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATCATGCAGGGGTGTCTaGGCAACGGGGTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRASCRGV*ATGWWN
Trigger: GTTCCACCACCCCGTTGCCCAGACACCCCTGCATGA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCAGATCTGGGAAAGGGTaGTGTACATTGCGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASARSGKG*CTLRSH
Trigger: ATGGGAGCGCAATGTACACCACCCTTTCCCAGATCT...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGAGAGGCGGGGGCATCTaGGGGCTGAGGGCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRRGGGI*GLRAQD
Trigger: ATCCTGGGCCCTCAGCCCCCAGATGCCCCCGCCTCT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCAGAGGCGGGGGCATCTaGGGGCTGAGGGCCCAGGAT +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIRGGGI*GLRAQD
Trigger: ATCCTGGGCCCTCAGCCCCCAGATGCCCCCGCCTCT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCATGGTGGGCGAGTATCTaGGGAGGCCTGGGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPWWASI*GGLGRW
Trigger: CCACCGACCCAGGCCTCCCCAGATACTCGCCCACCA...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACAGAAGGCTCGGGGTTaGTCGGTGCACGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPQKARG*SVHAGT
Trigger: AGTCCCCGCGTGCACCGACCAACCCCGAGCCTTCTG...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCATGGGGGAGTCCTGCCTaGTCCTGGGTTCCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPWGSPA*SWVPRR
Trigger: TCTCCGGGGAACCCAGGACCAGGCAGGACTCCCCCA...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGGGAGGTGTCTGGAGTaGGGGTGCGTGGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIGRCLE*GCVGGV
Trigger: CACCCCACCCACGCACCCCCACTCCAGACACCTCCC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGACTCCTGGCCCCTGTaGCTTCTCTGCCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAADSWPL*LLCLSL
Trigger: CAGGCTCAGGCAGAGAAGCCACAGGGGCCAGGAGTC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCAAGCAGAGGGACTTCTaGGTCTGGAAGTTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAKQRDF*VWKLEL
Trigger: AAGCTCCAACTTCCAGACCCAGAAGTCCCTCTGCTT...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGGAGGCCTTCGGCCTTaGGATGGCAAACTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAGGLRP*DGKLVL
Trigger: CAGGACCAGTTTGCCATCCCAAGGCCGAAGGCCTCC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS-3UTR TCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCGCGAGGCTCCTCCATaGACTAGGTTGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAREAPP*TRLRLL
Trigger: CAGCAGCCTCAACCTAGTTCATGGAGGAGCCTCGCG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCTGCTATGCAAACGGTTaGAGGTTGGAGACATCTGTG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASACYANG*RLETSV
Trigger: CACAGATGTCTCCAACCTTCAACCGTTTGCATAGCA...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCATTAGGCTGCAGGGAGTaGGCAGAGCGTCCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPLGCRE*AERPCG
Trigger: CCCACACGGACGCTCTGCTCACTCCCTGCAGCCTAA...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAAGGAAGGGGGCTGCCTaGAGGGGATGTTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPRKGAA*RGCWLG
Trigger: ACCCAGCCAACATCCCCTTCAGGCAGCCCCCTTCCT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGTCAACCCTCTTCGGTaGGGTTTGCCAGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAVNPLR*GLPDGW
Trigger: CCAGCCATCTGGCAAACCTCACCGAAGAGGGTTGAC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGAGGCGGGGGCGCCTCTaGGGATGGTCTGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGRRGRL*GWSGQL
Trigger: GAGCTGTCCAGACCATCCTCAGAGGCGCCCCCGCCT...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCAACAGATGGGGCCGTaGGAGCTCCTGGACGGAGGG +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRQQMGP*ELLDGG
Trigger: CCCTCCGTCCAGGAGCTCTCACGGCCCCATCTGTTG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACTGGCAGCTGTGCCGCTaGCTGGGTATGGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDWQLCR*LGMGRW
Trigger: CCAGCGTCCCATACCCAGGCAGCGGCACAGCTGCCA...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCTGGCAGCTGTGCCGCTaGCTGGGTATGGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIWQLCR*LGMGRW
Trigger: CCAGCGTCCCATACCCAGGCAGCGGCACAGCTGCCA...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGGAGTCTGCCCGCAGTaGATGTGGTGGGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPGVCPQ*MWWARR
Trigger: CCGCCTGGCCCACCACATGCACTGCGGGCAGACTCC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTGGACATGGAGCAGCTaGTGGCTGTCAGGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAWTWSS*WLSGAQ
Trigger: CTGAGCGCCTGACAGCCAGCAGCTGCTCCATGTCCA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGGGAGGCCCGGCATaGTCTGGCTGGACATGGAGC +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPRGGPA*SGWTWS
Trigger: GCTCCATGTCCAGCCAGAGCATGCCGGGCCTCCCCT...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATGGTGGACGGCTGCCTaGTTCTTTGCTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAWWTAA*FFAWGP
Trigger: TGGTCCCCAAGCAAAGAAGCAGGCAGCCGTCCACCA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACTTCCTGGGTCCACGTaGAGGCCAGGTGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPLPGST*RPGGLG
Trigger: CCCAAGCCCACCTGGCCTGCACGTGGACCCAGGAAG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGGCTTGGGGGAGTCCTaGCTGGTCCTGGGTTCCCCG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGGLGES*LVLGSP
Trigger: CGGGGAACCCAGGACCAGGCAGGACTCCCCCAAGCC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCTCTGGGGTGGGTGGCTaGCAACCACAGCGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPSGVGG*QPQRGG
Trigger: CCCTCCCCGCTGTGGTTGGCAGCCACCCACCCCAGA...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACTAGGGCTCGGGCCCTaGCACTTCTGCCTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPLGLGP*HFCLCG
Trigger: CCCACAAAGGCAGAAGTGGCAGGGCCCGAGCCCTAG...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCACAAGGTGGTCTGGCTaGAGGCTGGACTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAATRWSG*RLDCGW
Trigger: CCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCTTGGCGTTGGTGTTTaGGGGGCTGACCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAALGVGV*GADLLL
Trigger: GAGCAGCAGGTCAGCCCCCCAAACACCAACGCCAAG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGCTTAGGGGGCGGCTCTaGCTCTGTGTCCGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGLRGRL*LCVRPV
Trigger: GACCGGCCGGACACAGAGCCAGAGCCGCCCCCTAAG...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAATGAGCTGGGGGAGATaGAGTTGGCCTGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAMSWGR*SWPGCR
Trigger: TCTGCACCCAGGCCAACTCCATCTCCCCCAGCTCAT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGAAGGGGATGTTGGCTaGGTGAGGCATGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAEGDVG*VRHELG
Trigger: CCCCAGCTCATGCCTCACCCAGCCAACATCCCCTTC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCAGCTCCCTCCTGCCTTaGCCCTGGTTGCCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAASSLLP*PWLPKW
Trigger: CCACTTAGGCAACCAGGGCCAAGGCAGGAGGGAGCT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCTACCTTCTTGTGACTTaGCTGGTCTGGAGGACGTTT +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAYLLVT*LVWRTF
Trigger: AAACGTCCTCCAGACCAGCCAAGTCACAAGAAGGTA...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGCCGGCTCCCCTCTCTaGGAGGCAGGAGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGAGSPL*EAGASS
Trigger: GGAGGATGCTCCTGCCTCCCAGAGAGGGGAGCCGGC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAACATGGAGCAGCTGCTaGCTGTCAGGCGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRATWSSC*LSGAQL
Trigger: AAGCTGAGCGCCTGACAGCCAGCAGCTGCTCCATGT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGAGATGAGTCGTTTTTaGTTAGCGAGTGTTTGCGGG +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAEMSRF*LASVCG
Trigger: CCCGCAAACACTCGCTAACCAAAAACGACTCATCTC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCATGGCCGTGGAAGTCATaGAGGGCGGAGAAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPWPWKS*RAEKGR
Trigger: CCGACCCTTCTCCGCCCTCCATGACTTCCACGGCCA...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGCACGGGTCAAGTGCTaGGAGTGCAGAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPARVKC*ECRGRW
Trigger: CCACCTGCCTCTGCACTCCCAGCACTTGACCCGTGC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCCAGAAGGCTCGGGGTTaGTCGGTGCACGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIQKARG*SVHAGT
Trigger: AGTCCCCGCGTGCACCGACCAACCCCGAGCCTTCTG...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCATGGCCTGCCCACCTGTaGAGTGCCAGGATGGGCCCA +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPWPAHL*SARMGP
Trigger: TGGGCCCATCCTGGCACTCCACAGGTGGGCAGGCCA...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGGGAGGTGTCTGGAGTaGGGGTGCGTGGGTGGGGTG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPGRCLE*GCVGGV
Trigger: CACCCCACCCACGCACCCCCACTCCAGACACCTCCC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGTGAACAAGGTGGTCTaGCTGCAGGCTGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAVNKVV*LQAGLW
Trigger: CCACAGTCCAGCCTGCAGCCAGACCACCTTGTTCAC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACCGTGGGCAGTCCCATaGGTTAGGGCTGAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAPWAVP*VRAERQ
Trigger: TTGCCTTTCAGCCCTAACCCATGGGACTGCCCACGG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACGCGAGGCTCCTCCATaGACTAGGTTGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPREAPP*TRLRLL
Trigger: CAGCAGCCTCAACCTAGTTCATGGAGGAGCCTCGCG...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCAAGTGTCACTGGCTGTaGGTGGACTCGGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAKCHWL*VDSEQV
Trigger: GACCTGCTCCGAGTCCACTCACAGCCAGTGACACTT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGGGCTTCGGAGTCGGTaGTATGGTCATCGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAGLRSR*YGHRRS
Trigger: ACTCCTTCGATGACCATATCACCGACTCCGAAGCCC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTGGGAGGTAAACACGTaGCTGCTGTGGCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAWEVNT*LLWLRA
Trigger: AGCCCTGAGCCACAGCAGTCACGTGTTTACCTCCCA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCTCCTTCGAAGATTTTaGTCCTCGCCGGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAALLRRF*SSPAPL
Trigger: GAGGGGAGCCGGCGAGGATCAAAATCTTCGAAGGAG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACCCCGGAGAAGCCACTaGCCCAGGCTGCGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTPRRSH*PRLRWA
Trigger: GGCCCACCGCAGCCTGGGTCAGTGGCTTCTCCGGGG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCCCCGGAGAAGCCACTaGCCCAGGCTGCGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGPRRSH*PRLRWA
Trigger: GGCCCACCGCAGCCTGGGTCAGTGGCTTCTCCGGGG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGACCCTGTCCTCAGGCTaGTGTGGATGTGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRTLSSG*CGCALG
Trigger: GCCCAGGGCACATCCACATCAGCCTGAGGACAGGGT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCACCCTGTCCTCAGGCTaGTGTGGATGTGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTTLSSG*CGCALG
Trigger: GCCCAGGGCACATCCACATCAGCCTGAGGACAGGGT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGTGGCAAAGTGGTCCTaGAACAGTTCCCCGCAAACC +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAVAKWS*NSSPQT
Trigger: GGTTTGCGGGGAACTGTTTCAGGACCACTTTGCCAC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGAGAGCCCTAGTCTCTaGGGGAAGCAGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPESPSL*GKQPGA
Trigger: AGCTCCTGGCTGCTTCCCTCAGAGACTAGGGCTCTC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGAGGGTTGCAGGGGTTaGGCCCAGAGTGAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIEGCRG*AQSESH
Trigger: GTGGCTCTCACTCTGGGCTCAACCCCTGCAACCCTC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACAGTACTCCCTTTGCTaGCTGGGCTCAGAAACGCCT +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAQYSLC*LGSETP
Trigger: AGGCGTTTCTGAGCCCAGGCAGCAAAGGGAGTACTG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATTTCTAGCTCCCTCCTaGCTTGGCCCTGGTTGCCTA +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAFLAPS*LGPGCL
Trigger: TAGGCAACCAGGGCCAAGGCAGGAGGGAGCTAGAAA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGCTTCCTGGGTCCACGTaGAGGCCAGGTGGGCTTGGG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGLPGST*RPGGLG
Trigger: CCCAAGCCCACCTGGCCTGCACGTGGACCCAGGAAG...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATCCAGTCAGGAGGCCTaGCCGGGCCTCCGCCGGTCC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTSSQEA*PGLRRS
Trigger: GGACCGGCGGAGGCCCGGGCAGGCCTCCTGACTGGA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGAGCCCACAGAGCTGCTaGGGTCCAGCGGCGGGGTGG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVSPQSC*GPAAGW
Trigger: CCACCCCGCCGCTGGACCGCAGCAGCTCTGTGGGCT...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGGCAGCCCACAGAGCTaGTGCGGTCCAGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGGSPQS*CGPAAG
Trigger: CCCCGCCGCTGGACCGCAGCAGCTCTGTGGGCTGCC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGGCTTGGGGGAGTCCTaGCTGGTCCTGGGTTCCCCG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWGLGES*LVLGSP
Trigger: CGGGGAACCCAGGACCAGGCAGGACTCCCCCAAGCC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAAGGCTGATGTGGATGTaGCCTGGGCTCCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPRLMWM*PGLPTS
Trigger: GGAAGTGGGGAGCCCAGGGCACATCCACATCAGCCT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCATGCCCACCTGTGGAGTaGCAGGATGGGCCCATGACT +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPCPPVE*QDGPMT
Trigger: AGTCATGGGCCCATCCTGGCACTCCACAGGTGGGCA...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCTAGGGCTCGGGCCCTaGCACTTCTGCCTTTGTGGG +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTLGLGP*HFCLCG
Trigger: CCCACAAAGGCAGAAGTGGCAGGGCCCGAGCCCTAG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCCTGGCTCACACTGATTaGTTTGGAGAATTCCAACGA +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASALAHTD*FGEFQR
Trigger: TCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAG...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGAGCCCCCGGTCTGCTaGTTTGTAGGTCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDEPPVC*FVGLGQ
Trigger: CTGCCCCAGACCTACAAAGCAGCAGACCGGGGGCTC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCAGCCACTGCCTCCTCTaGTGCTTCCCTCAACAGGCA +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAASHCLL*CFPQQA
Trigger: TGCCTGTTGAGGGAAGCAGCAGAGGAGGCAGTGGCT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTGGCCCAGTCATCCCTaGTCCTGGCACAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAWPSHP*SWHKRC
Trigger: GCATCTCTTGTGCCAGGACCAGGGATGACTGGGCCA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAAGACATCTGTGTCCATaGCCCAGTCATCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRARHLCP*PSHPWS
Trigger: GGACCAGGGATGACTGGGCCATGGACACAGATGTCT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGCTGGCAGTGGCAGGTaGCCCCCACGAGTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVAGSGR*PPRVPR
Trigger: ACGGGGGACTCGTGGGGGCCACCTGCCACTGCCAGC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGGAAGCTGTGAGATGTaGACGGATGCTTCGATGGGG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAGSCEM*TDASMG
Trigger: CCCCATCGAAGCATCCGTCCACATCTCACAGCTTCC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCAGAGAAGGGGCTGCTTaGGTCTTGGGGAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAREGAA*VLGRAL
Trigger: CAGAGCTCTCCCCAAGACCCAAGCAGCCCCTTCTCT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATCGTGGCTGGAACTGTaGCTCCCAGAGCTGTATAGC +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRASWLEL*LPELYS
Trigger: GCTATACAGCTCTGGGAGCCACAGTTCCAGCCACGA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCACTCCCTTTGCTGCCTaGGCTCAGAAACGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAATPFAA*AQKRLL
Trigger: GAGCAGGCGTTTCTGAGCCCAGGCAGCAAAGGGAGT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCGCTGTCGATCTCGCTaGTGTCCACCACGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDRCRSR*CPPRPR
Trigger: ACGAGGCCGTGGTGGACACCAGCGAGATCGACAGCG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACCTCGGAAGGGGTGGTaGGGGGTGCTGATAGTGCAG +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPPRKGW*GVLIVQ
Trigger: CTGCACTATCAGCACCCCCCACCACCCCTTCCGAGG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGGGTGCCTGCAGAGATaGGCTTTGCGATCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAGCLQR*ALRSEA
Trigger: AGCTTCAGATCGCAAAGCCCATCTCTGCAGGCACCC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTTGGCTGGAAGCCCGTaGGTCCCTCCAAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRLAGSP*VPPRRA
Trigger: TGCCCTCCTTGGAGGGACCCACGGGCTTCCAGCCAA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCTGGCTTGGGAGTCCTTaGCTGGAAGCCCGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIWLGSP*LEARGS
Trigger: GGACCCACGGGCTTCCAGCCAAGGACTCCCAAGCCA...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGAGACATTGCTTTCCTaGCTCGGGCTGCGAGACAGA +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAETLLS*LGLRDR
Trigger: TCTGTCTCGCAGCCCGAGCCAGGAAAGCAATGTCTC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTGTCAGATGAGGGACTaGGGGCCTCGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAACQMRD*GPRLSH
Trigger: ATGGGAAAGCCGAGGCCCCCAGTCCCTCATCTGACA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGGGTGCCCAGGGGTTTaGGGCGCATGTCAGATGAGG +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIGCPGV*GACQMR
Trigger: CCTCATCTGACATGCGCCCCAAACCCCTGGGCACCC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGCATTTTCTTCTCTCTaGCGGGGCCACCCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDAFSSL*RGHPRW
Trigger: CCAGCGCGGGTGGCCCCGCCAGAGAGAAGAAAATGC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCTGTGTAGGGCACAGTaGGCCCCAATGGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTLCRAQ*APMGAC
Trigger: ACAGGCCCCCATTGGGGCCCACTGTGCCCTACACAG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACTTGCGGGAGCTGGATaGCACAAGCCTTCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPLAGAG*HKPSCL
Trigger: GAGGCAGGAAGGCTTGTGCCATCCAGCTCCCGCAAG...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGCCTGCTTCTTTGCTTaGGGACCACGGTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAACFFA*GPRSSW
Trigger: CCAAGAAGACCGTGGTCCCCAAGCAAAGAAGCAGGC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGTATCTGGGGAGGCCTaGGTCGGTGGTACCCTCGAG +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRVSGEA*VGGTLE
Trigger: CTCGAGGGTACCACCGACCCAGGCCTCCCCAGATAC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGAGACCATCTCCTGGTaGGCGAGTATCTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPETISW*ASIWGG
Trigger: GCCTCCCCAGATACTCGCCCACCAGGAGATGGTCTC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGCCAGGATGTGGCCGTaGAAGTCATGGAGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIARMWP*KSWRAE
Trigger: CTCCGCCCTCCATGACTTCCACGGCCACATCCTGGC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGGTGCCCCGGTCCCATaGGGTGTCCAGTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWGAPVP*GVQSGG
Trigger: GCCTCCTGACTGGACACCCCATGGGACCGGGGCACC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCAGAAGGCTCGGGGTTaGTCGGTGCACGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPQKARG*SVHAGT
Trigger: AGTCCCCGCGTGCACCGACCAACCCCGAGCCTTCTG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTGGGGGAGTCCTGCCTaGTCCTGGGTTCCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGWGSPA*SWVPRR
Trigger: TCTCCGGGGAACCCAGGACCAGGCAGGACTCCCCCA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCAGAGAGGCTAAGCGTTaGGGGGAACCCTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAREAKR*GEPCPQ
Trigger: CTGAGGACAGGGTTCCCCCCAACGCTTAGCCTCTCT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTCTGCCTGGGGACACTaGCCTTTCTGCTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAASAWGH*PFCWQR
Trigger: TCTCTGCCAGCAGAAAGGCCAGTGTCCCCAGGCAGA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCCAGAAGGGAGGTGTCTaGAGTGGGGGTGCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIQKGGV*SGGAWV
Trigger: CACCCACGCACCCCCACTCCAGACACCTCCCTTCTG...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACAGAAGGGAGGTGTCTaGAGTGGGGGTGCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPQKGGV*SGGAWV
Trigger: CACCCACGCACCCCCACTCCAGACACCTCCCTTCTG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCAGAATCTGTGGTGGCTaGGTGAAGTATCAAACACCA +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASARICGG*VKYQTP
Trigger: TGGTGTTTGATACTTCACCCAGCCACCACAGATTCT...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGGTCTGGCTGCAGGCTaGACTGTGGCTGGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAGLAAG*TVAGLS
Trigger: AGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGCAATATGGACAGTGTaGTCCAGGCTGGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAAIWTV*SRLGLL
Trigger: CAGCAAGCCCAGCCTGGACCACACTGTCCATATTGC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAAAAGCCCTGGCCTCCTaGGACTTGGAGGAGTCACTT +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAKALAS*DLEESL
Trigger: AAGTGACTCCTCCAAGTCCCAGGAGGCCAGGGCTTT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGGCACGGCATCAATGTaGAGGCAGCCCTTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAGTASM*RQPFGE
Trigger: CTCACCAAAGGGCTGCCTCCACATTGATGCCGTGCC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGAAACCTCGACCAGTTaGTTCCTCCCCCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAETSTS*FLPHCP
Trigger: TGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCGTGGAGCGCAGGCCTaGGGGGCAAGGACTCACCAA +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPRGAQA*GARTHQ
Trigger: TTGGTGAGTCCTTGCCCCCCAGGCCTGCGCTCCACG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCTGCTGTCGGGCTCCTaGAGGGTTGCAGGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDLLSGS*RVAGVE
Trigger: CTCAACCCCTGCAACCCTCCAGGAGCCCGACAGCAG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCTGCTGTCGGGCTCCTaGAGGGTTGCAGGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTLLSGS*RVAGVE
Trigger: CTCAACCCCTGCAACCCTCCAGGAGCCCGACAGCAG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCTCCATGAACTAGGTTaGGGCTGCTGGGTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAALHELG*GCWVCA
Trigger: GGCACAAACCCAGCAGCCTCAACCTAGTTCATGGAG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGTGCTGCGGAAGCTGTaGGATGTGGACGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPVLRKL*DVDGCF
Trigger: GAAGCATCCGTCCACATCTCACAGCTTCCGCAGCAC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGGCGGCAGAAGGCATTaGGTGGCTTCTCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPGGRRH*VASQER
Trigger: CCTCTCCTGAGAAGCCACTCAATGCCTTCTGCCGCC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACCGGGGCTGCCAAACTaGCTTTTTGTGGACTCAAAG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAPGLPN*LFVDSK
Trigger: CTTTGAGTCCACAAAAAGTCAGTTTGGCAGCCCCGG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTTAGGCTGCAGGGAGTaGGCAGAGCGTCCGTGTGGG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGLGCRE*AERPCG
Trigger: CCCACACGGACGCTCTGCTCACTCCCTGCAGCCTAA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACCTCTCAAACGAGGCTaGGCGGCTGGACCCACTCAA +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPPLKRG*AAGPTQ
Trigger: TTGAGTGGGTCCAGCCGCTCAGCCTCGTTTGAGAGG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGAGGAAGGGGGCTGCCTaGAGGGGATGTTGGCTGGGT +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGRKGAA*RGCWLG
Trigger: ACCCAGCCAACATCCCCTTCAGGCAGCCCCCTTCCT...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGAGGCGGGGGCGCCTCTaGGGATGGTCTGGACAGCTC +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVRRGRL*GWSGQL
Trigger: GAGCTGTCCAGACCATCCTCAGAGGCGCCCCCGCCT...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACTTGTAGCTCAAGGCTaGGCCTGTGTCTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRALVAQG*ACVFLH
Trigger: GTGGAGAAAGACACAGGCTCAGCCTTGAGCTACAAG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGGTGGTGACTCGGCCTaGCCTGGAGACCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGGGDSA*PGDHLL
Trigger: CAGGAGATGGTCTCCAGGTCAGGCCGAGTCACCACC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGATGAGCAGGGCCGGGTaGGCAGGAGGGACTTCGGGA +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWMSRAG*AGGTSG
Trigger: TCCCGAAGTCCCTCCTGCTCACCCGGCCCTGCTCAT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCAGGCGACACGGAGGCTaGCGAGCTCTCAGTGGGACT +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPRRHGG*RALSGT
Trigger: AGTCCCACTGAGAGCTCGTCAGCCTCCGTGTCGCCT...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGAGATGCCACGCTGGATaGTGGGGGTGGCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRRCHAG*WGWLFS
Trigger: GGAGAAGAGCCACCCCCAGCATCCAGCGTGGCATCT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCAGATGCCACGCTGGATaGTGGGGGTGGCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIRCHAG*WGWLFS
Trigger: GGAGAAGAGCCACCCCCAGCATCCAGCGTGGCATCT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTCCTGGCACAAGAGATaGCACGCTGGATGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTSWHKR*HAGCWG
Trigger: CCCCCAGCATCCAGCGTGGCATCTCTTGTGCCAGGA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTCCTGGCACAAGAGATaGCACGCTGGATGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRSWHKR*HAGCWG
Trigger: CCCCCAGCATCCAGCGTGGCATCTCTTGTGCCAGGA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACGCACCAGCACTTTCTaGCTGAATGTCTGTCGGGAA +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRARTSTF*LNVCRE
Trigger: TTCCCGACAGACATTCAGGCAGAAAGTGCTGGTGCG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGACCCCTCCAGGAGATaGTCAGGTTTGCCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTDPSRR*SGLPGD
Trigger: GTCGCCTGGCAAACCTGAGCATCTCCTGGAGGGGTC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCACTGGCAGATGTACTTaGCTGGCTTCTGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAATGRCT*LASGAS
Trigger: GGAAGCCCCAGAAGCCAGGCAAGTACATCTGCCAGT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGTGTGTGAGCGAATGTaGTTCTGGAGCACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPVCERM*FWSTLG
Trigger: GCCCAGCGTGCTCCAGAAGCACATTCGCTCACACAC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCTGGAGAGAAGGGGCTaGTTGGGTCTTGGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRLERRG*LGLGES
Trigger: GCTCTCCCCAAGACCCAAGCAGCCCCTTCTCTCCAG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCGAGTGACTGGGCTGTaGTGGACTGGGACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTRVTGL*WTGTGN
Trigger: GTTCCCTGTCCCAGTCCAGCACAGCCCAGTCACTCG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCGAGTGACTGGGCTGTaGTGGACTGGGACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDRVTGL*WTGTGN
Trigger: GTTCCCTGTCCCAGTCCAGCACAGCCCAGTCACTCG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTTGGGGACTCCATGCTaGTGCGCCTGGACAGTGAGC +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRLGTPC*CAWTVS
Trigger: GCTCACTGTCCAGGCGCAGCAGCATGGAGTCCCCAA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCATTGGGGACTCCATGCTaGTGCGCCTGGACAGTGAGC +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPLGTPC*CAWTVS
Trigger: GCTCACTGTCCAGGCGCAGCAGCATGGAGTCCCCAA...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGAATGGGGGCCTGTCCTaGCCTGGGCCCTTGCCTCCC +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVNGGLS*PGPLPP
Trigger: GGGAGGCAAGGGCCCAGGGCAGGACAGGCCCCCATT...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCTTCCTGCCTCAGGATaGGGAGCTGTGGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRLPASG*GAVAMV
Trigger: CACCATGGCCACAGCTCCGCATCCTGAGGCAGGAAG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGGTGAACCTCTGTCATaGGGGGCTTGCGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGGEPLS*GACGSW
Trigger: CCAGCTCCCGCAAGCCCCGCATGACAGAGGTTCACC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGCATGCTGGGCTTCTTaGAGCGAATTCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAACWAS*SEFHTP
Trigger: AGGAGTGTGGAATTCGCTGCAAGAAGCCCAGCATGC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCATGGACATGGAGCAGCTaGTGGCTGTCAGGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPWTWSS*WLSGAQ
Trigger: CTGAGCGCCTGACAGCCAGCAGCTGCTCCATGTCCA...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGAGGGGAGGCCCGGCATaGTCTGGCTGGACATGGAGC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWRGGPA*SGWTWS
Trigger: GCTCCATGTCCAGCCAGAGCATGCCGGGCCTCCCCT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCAAGGGAGAGCGCCCATaGCCCTTCCTGGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPKGERP*PFLGPR
Trigger: ACGTGGACCCAGGAAGGGGCATGGGCGCTCTCCCTT...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGCTCCTGGCCGGGCCTaGACCATCTGGATCCCACCG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVAPGRA*TIWIPP
Trigger: CGGTGGGATCCAGATGGTGCAGGCCCGGCCAGGAGC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGTGTGGGCTCTGCAGGTaGCCCGGTCCCATGGGGTGT +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWCGLCR*PGPMGC
Trigger: ACACCCCATGGGACCGGGGCACCTGCAGAGCCCACA...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGGCAGCCCACAGAGCTaGTGCGGTCCAGCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDGSPQS*CGPAAG
Trigger: CCCCGCCGCTGGACCGCAGCAGCTCTGTGGGCTGCC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCTGCCCACCTGTGGAGTaGCAGGATGGGCCCATGACT +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGICPPVE*QDGPMT
Trigger: AGTCATGGGCCCATCCTGGCACTCCACAGGTGGGCA...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAACAAGGTGGTCTGGCTaGAGGCTGGACTGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPTRWSG*RLDCGW
Trigger: CCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGAGCCCCCGGTCTGCTaGTTTGTAGGTCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGEPPVC*FVGLGQ
Trigger: CTGCCCCAGACCTACAAAGCAGCAGACCGGGGGCTC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCTTACGGAGGCGACAGTaGAGGCAGCTGGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGILRRRQ*RQLAAV
Trigger: GACAGCAGCCAGCTGCCTGCACTGTCGCCTCCGTAA...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTAGGGGCGGGCTTGCTTaGCCAGGACCCCGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGRGGLA*PGPREA
Trigger: AGCCTCGCGGGGTCCTGGCCAAGCAAGCCCGCCCCT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGAATGGCCTCTCCTTTaGTCAGCCGCTTCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPEWPLL*SAASGD
Trigger: GTCCCCGGAAGCGGCTGACCAAAGGAGAGGCCATTC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGCTGTGCCGCTGCCTaGGTATGGGACGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPSCAAA*VWDAGR
Trigger: TCTTCCAGCGTCCCATACCCAGGCAGCGGCACAGCT...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGAGCTGTGCCGCTGCCTaGGTATGGGACGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRSCAAA*VWDAGR
Trigger: TCTTCCAGCGTCCCATACCCAGGCAGCGGCACAGCT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGGGGCTAAGAGCTCTTaGGCGGGGCTCTCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGGAKSS*AGLSWV
Trigger: CACCCAAGAGAGCCCCGCCCAAGAGCTCTTAGCCCC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGTGACTGGGCTGTGCTaGACTGGGACAGGGAACAGC +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDVTGLC*TGTGNS
Trigger: GCTGTTCCCTGTCCCAGTCCAGCACAGCCCAGTCAC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGGGTCTTCGAGTGACTaGGCTGTGCTGGACTGGGAC +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPGSSSD*AVLDWD
Trigger: GTCCCAGTCCAGCACAGCCCAGTCACTCGAAGACCC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCGCTGTCGATCTCGCTaGTGTCCACCACGGCCTCGT +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPRCRSR*CPPRPR
Trigger: ACGAGGCCGTGGTGGACACCAGCGAGATCGACAGCG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCCATGCTGCTGCGCCTaGACAGTGAGCTCCGCCTTG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPPCCCA*TVSSAL
Trigger: CAAGGCGGAGCTCACTGTCCAGGCGCAGCAGCATGG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCCTCGGAAGGGGTGGTaGGGGGTGCTGATAGTGCAG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPPRKGW*GVLIVQ
Trigger: CTGCACTATCAGCACCCCCCACCACCCCTTCCGAGG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGGACTCAAAGGCAGGTaGCTCTTCCTCGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPGLKGR*LFLVPK
Trigger: CTTGGGGACGAGGAAGAGCCACCTGCCTTTGAGTCC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCTTGGCTGGAAGCCCGTaGGTCCCTCCAAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPLAGSP*VPPRRA
Trigger: TGCCCTCCTTGGAGGGACCCACGGGCTTCCAGCCAA...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCTTGGGAGTCCTTGGCTaGAAGCCCGTGGGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPLGVLG*KPVGPS
Trigger: GGAGGGACCCACGGGCTTCCAGCCAAGGACTCCCAA...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCTTAGGGGGCGGCTCTaGCTCTGTGTCCGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVLRGRL*LCVRPV
Trigger: GACCGGCCGGACACAGAGCCAGAGCCGCCCCCTAAG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCAGCTGGGCAAGTGTCTaGCTGCGCTGGGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPSWASV*LRWGHW
Trigger: CCAATGGCCCCAGCGCAGCCAGACACTTGCCCAGCT...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGACTCCCCTGATGATTaGGCCATCTCTGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIDSPDD*AISARR
Trigger: GCGCCTGGCAGAGATGGCCCAATCATCAGGGGAGTC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGACTCCCCTGATGATTaGGCCATCTCTGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPDSPDD*AISARR
Trigger: GCGCCTGGCAGAGATGGCCCAATCATCAGGGGAGTC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACATGTGGGTGGTGGCTaGGGACAGTCAACATGTGGG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPHVGGG*GQSTCG
Trigger: CCCACATGTTGACTGTCCCCAGCCACCACCCACATG...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGCATTTTCTTCTCTCTaGCGGGGCCACCCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPAFSSL*RGHPRW
Trigger: CCAGCGCGGGTGGCCCCGCCAGAGAGAAGAAAATGC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAAGGCTGGACATGGCCTaGGTGGAGAAGAATTCTGGA +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRARLDMA*VEKNSG
Trigger: TCCAGAATTCTTCTCCACCCAGGCCATGTCCAGCCT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGAAGGGGATGTTGGCTaGGTGAGGCATGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIEGDVG*VRHELG
Trigger: CCCCAGCTCATGCCTCACCCAGCCAACATCCCCTTC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGAAGGGGATGTTGGCTaGGTGAGGCATGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPREGDVG*VRHELG
Trigger: CCCCAGCTCATGCCTCACCCAGCCAACATCCCCTTC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGTTGCTGAGCTGCCTTaGGACTGGGTGACCAAGATC +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAVAELP*DWVTKI
Trigger: GATCTTGGTCACCCAGTCCCAAGGCAGCTCAGCAAC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCTCCTGCCTTGGCCCTaGTTGCCTAAGTGGGATTTC +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAALLPWP*LPKWDF
Trigger: GAAATCCCACTTAGGCAACCAGGGCCAAGGCAGGAG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGATCTGAGGACAGGCTaGACAGCATTTCTAGCTCCC +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRADLRTG*TAFLAP
Trigger: GGGAGCTAGAAATGCTGTCCAGCCTGTCCTCAGATC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATTTCTTCACGCTCAGTaGGGTCAACCCTCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAFLHAQ*GQPSSV
Trigger: CACCGAAGAGGGTTGACCCCACTGAGCGTGAAGAAA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATGGTTGTGTGGAGGCTaGGGAACTGCAGTACCTTCT +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAWLCGG*GTAVPS
Trigger: AGAAGGTACTGCAGTTCCCCAGCCTCCACACAACCA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGGAACAGGTCGTCACTaGTTCCTTCTTCGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAGTGRH*FLLRLP
Trigger: TGGAAGCCGAAGAAGGAACCAGTGACGACCTGTTCC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCGTCCTTCCGAGTCCTaGAACAGGTCGTCACTGGTT +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAARPSES*NRSSLV
Trigger: AACCAGTGACGACCTGTTCCAGGACTCGGAAGGACG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCTGGACAGCTCATCCTaGCTCTCCTCCTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAALDSSS*LSSSSS
Trigger: TGAGGATGAGGAGGAGAGCCAGGATGAGCTGTCCAG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGGAGGCCTGGGTCGGTaGTACCCTCGAGTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTGGLGR*YPRVWR
Trigger: TCTCCAAACTCGAGGGTACCACCGACCCAGGCCTCC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGTCCGGGCCAGGATGTaGCCGTGGAAGTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPVRARM*PWKSWR
Trigger: CCTCCATGACTTCCACGGCCACATCCTGGCCCGGAC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCTCCTCTCCCTCTCCTTaGGGTAGTCCCCGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPSSPSP*GSPRPP
Trigger: TGGAGGGCGGGGACTACCCCAAGGAGAGGGAGAGGA...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGGCTGTGCGTGGGTGTaGGCTCTGCAGGTGCCCCGG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGGCAWV*ALQVPR
Trigger: CCGGGGCACCTGCAGAGCCCACACCCACGCACAGCC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGGTCCAGCGGCGGGGTaGCAGAAGGCTCGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSGPAAG*QKARGW
Trigger: CCAACCCCGAGCCTTCTGCCACCCCGCCGCTGGACC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGTCCTCAGGCTGATGTaGATGTGCCCTGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPVLRLM*MCPGLP
Trigger: GGGGAGCCCAGGGCACATCCACATCAGCCTGAGGAC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAAGAGAGGCTAAGCGTTaGGGGGAACCCTGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPREAKR*GEPCPQ
Trigger: CTGAGGACAGGGTTCCCCCCAACGCTTAGCCTCTCT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCACTGGCCTTTCTGCTaGCAGAGAGGGGTGGCTACG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDHWPFC*QRGVAT
Trigger: CGTAGCCACCCCTCTCTGCCAGCAGAAAGGCCAGTG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACTGCCTGCTGGGGCCTaGGTGGGGGTCACCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSLPAGA*VGVTCL
Trigger: CAGGCAGGTGACCCCCACCCAGGCCCCAGCAGGCAG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCCAAAAGAATCTGTGGTaGCTGGGTGAAGTATCAAAC +
Preference number: 4 (lower is better)
Translates to: PVASLPEPDGPGDCRASAQKNLW*LGEVSN
Trigger: GTTTGATACTTCACCCAGCCACCACAGATTCTTTTG...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAATAGCTCAAGAGCCCTaGGGCAGGCACTTGATTCAC +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAIAQEP*GRHLIH
Trigger: GTGAATCAAGTGCCTGCCCCAGGGCTCTTGAGCTAT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGTGAACAAGGTGGTCTaGCTGCAGGCTGGACTGTGG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPVNKVV*LQAGLW
Trigger: CCACAGTCCAGCCTGCAGCCAGACCACCTTGTTCAC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGACTCCTGGCCCCTGTaGCTTCTCTGCCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGDSWPL*LLCLSL
Trigger: CAGGCTCAGGCAGAGAAGCCACAGGGGCCAGGAGTC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGAGAGGAGGGCGTGCATaGGGCGAGCGTCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRRGGRA*GERLSP
Trigger: TGGAGAAAGACGCTCGCCCCATGCACGCCCTCCTCT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CAA 72 bp GCCCATGACTCAGACTACCAGAGTATCCAGGAGCCCTaGGGGAGCCAGCCCTCCTCCTTCTACCTGCACCTA +
Preference number: 4 (lower is better)
Translates to: AHDSDYQSIQEP*GSQPSSFYLHL
Trigger: TAGGTGCAGGTAGAAGGAGGAGGGCTGGCTCCCCAAGGGCTCCTGGATACTCTGGTAGTCTGAGTCATGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CAA 72 bp TGGACAGTGTGGTCCAGGCTGGGCTTGCTGCTTCTCTaGGGGAGGATGAGAGCCCTAGTCTCTGAGGGAAGC +
Preference number: 4 (lower is better)
Translates to: WTVWSRLGLLLL*GRMRALVSEGS
Trigger: GCTTCCCTCAGAGACTAGGGCTCTCATCCTCCCCAAGAGAAGCAGCAAGCCCAGCCTGGACCACACTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAAGTGTCACTGGCTGTaGGTGGACTCGGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPKCHWL*VDSEQV
Trigger: GACCTGCTCCGAGTCCACTCACAGCCAGTGACACTT...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGGCGGGCTGCATTTATaGATAATCCCAGTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAGGLHL*IIPVSQ
Trigger: TTGGGACACTGGGATTATTCATAAATGCAGCCCGCC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGTGCTGCGGAAGCTGTaGGATGTGGACGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIVLRKL*DVDGCF
Trigger: GAAGCATCCGTCCACATCTCACAGCTTCCGCAGCAC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGTTTGCCAGGCGACATaGATGCTGGTGTCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPVCQAT*MLVSEG
Trigger: ACCCTCTGACACCAGCATTCATGTCGCCTGGCAAAC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCTCGCCACCCATGCCTaGGGCCAGGCCTGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWLATHA*GQACFD
Trigger: ATCAAAGCAGGCCTGGCCTCAGGCATGGGTGGCGAG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGGGCTTCGGAGTCGGTaGTATGGTCATCGAAGGAGT +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPGLRSR*YGHRRS
Trigger: ACTCCTTCGATGACCATATCACCGACTCCGAAGCCC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTGGGAGGTAAACACGTaGCTGCTGTGGCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRWEVNT*LLWLRA
Trigger: AGCCCTGAGCCACAGCAGTCACGTGTTTACCTCCCA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGACTTGGTTCTGCTGGTaGCTTGGTGGACTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRTWFCW*LGGLQG
Trigger: CCCCTGGAGTCCACCAAGTCACCAGCAGAACCAAGT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCTCCAAGGAGGGCACTaGTTTACTTGGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAALQGGH*FTWFCW
Trigger: CCAGCAGAACCAAGTAAATCAGTGCCCTCCTTGGAG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCAGAGGGTTTACTGGATaGGGGCTGTGGTTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAARGFTG*GLWFFA
Trigger: AGCGAAGAACCACAGCCCTCATCCAGTAAACCCTCT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCGGGGGTCCACCATGTaGGGTGGCCGCAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWRGSTM*GGRRGN
Trigger: ATTTCCTCTGCGGCCACCTCACATGGTGGACCCCCG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCCCAGAAGACAGTGCTaGGGAGGTCGGGTATGGCAT +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTPRRQC*GGRVWH
Trigger: ATGCCATACCCGACCTCCTCAGCACTGTCTTCTGGG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAAGTGCCACAGTTGCTaGGCTGCCTTGGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPKCHSC*AALGLG
Trigger: ACCCAGTCCCAAGGCAGCTCAGCAACTGTGGCACTT...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATACAGTCGTCCCCTTTaGTGGGGGTTCCTCAAACTT +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAYSRPL*WGFLKL
Trigger: AAGTTTGAGGAACCCCCATCAAAGGGGACGACTGTA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTGTGTCAGATGGATCTaGGGACAGGCTGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAACVRWI*GQAGQH
Trigger: ATGCTGTCCAGCCTGTCCTCAGATCCATCTGACACA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCATTCCGGGGAAACCAGTaGAGGGAGGTGAACCTCTGT +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPFRGNQ*REVNLC
Trigger: ACAGAGGTTCACCTCCCTTCACTGGTTTCCCCGGAA...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCTCCTTCGAAGATTTTaGTCCTCGCCGGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRLLRRF*SSPAPL
Trigger: GAGGGGAGCCGGCGAGGATCAAAATCTTCGAAGGAG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCTCCTTCGAAGATTTTaGTCCTCGCCGGCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTLLRRF*SSPAPL
Trigger: GAGGGGAGCCGGCGAGGATCAAAATCTTCGAAGGAG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAAGGGCCCAGGATGGGTaGGGAGTCTGCCCGCAGTGC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTRAQDG*GVCPQC
Trigger: GCACTGCGGGCAGACTCCTCACCCATCCTGGGCCCT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCCAGGGGGCAGAGGGTaGGAGGAGACAGCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWPGGRG*EETAEV
Trigger: GACTTCAGCTGTCTCCTCTCACCCTCTGCCCCCTGG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCTGCTGAGGAGCTTGTaGGGTAGAGGCGCGGGCGGG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGLLRSL*GRGAGG
Trigger: CCCGCCCGCGCCTCTACCTCACAAGCTCCTCAGCAG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCGGGAGGAGAGAGGATaGGCAGGGCCGGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGREERG*AGPGEQ
Trigger: CTGCTCACCCGGCCCTGCTCATCCTCTCTCCTCCCG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGGAAAAACCCAGCCATaGGGGGAACAGGCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTGKTQP*GEQAPL
Trigger: CAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGCTGGTGTCAGAGGGTaGTGCGGAAGCTGTGAGATG +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIAGVRG*CGSCEM
Trigger: CATCTCACAGCTTCCGCAGCACCCTCTGACACCAGC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGACCCCTCCAGGAGATaGTCAGGTTTGCCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPDPSRR*SGLPGD
Trigger: GTCGCCTGGCAAACCTGAGCATCTCCTGGAGGGGTC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAACTGGCAGATGTACTTaGCTGGCTTCTGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPTGRCT*LASGAS
Trigger: GGAAGCCCCAGAAGCCAGGCAAGTACATCTGCCAGT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGTGTGTGAGCGAATGTaGTTCTGGAGCACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPVCERM*FWSTLG
Trigger: GCCCAGCGTGCTCCAGAAGCACATTCGCTCACACAC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGCTGACCTGCTGCTCTaGACTCTCGGAGCGAGAGAA +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPADLLL*TLGARE
Trigger: TTCTCTCGCTCCGAGAGTGCAGAGCAGCAGGTCAGC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGCGGTACTGGGCGGGTaGTGGAGGCTCAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWAVLGG*WRLSSD
Trigger: ATCACTGCTGAGCCTCCAGCACCCGCCCAGTACCGC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACAGGCTGTGTCTTTGCTaGTTGGGCCAGGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDRLCLC*LGQAPQ
Trigger: CTGAGGAGCCTGGCCCAAGCAGCAAAGACACAGCCT...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTTTCCTGGCTCGGGCTaGGAGACAGAGGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGFPGSG*ETEAQR
Trigger: CCTCTGTGCCTCTGTCTCGCAGCCCGAGCCAGGAAA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCAGGAAGGAAGGGGGCTaGCTGAAGGGGATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIRKEGG*LKGMLA
Trigger: AGCCAACATCCCCTTCAGGCAGCCCCCTTCCTTCCT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGTAGCCGGATGTCACTaGTGTACTCTGTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIVAGCH*CTLCWG
Trigger: CCCCCAGCACAGAGTACAGCAGTGACATCCGGCTAC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGGACGTCAGTGTGGGTaGGGATGTGTTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAGRQCG*GCVSSA
Trigger: TGCTGAAGAAACACATCCGCACCCACACTGACGTCC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGGAGTCTGCCCGCAGTaGATGTGGTGGGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTGVCPQ*MWWARR
Trigger: CCGCCTGGCCCACCACATGCACTGCGGGCAGACTCC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGGCTGCCTGCTTCTTTaGTTGGGGACCACGGTCTTC +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTGCLLL*LGTTVF
Trigger: GAAGACCGTGGTCCCCAAGCAAAGAAGCAGGCAGCC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCTAGTGGTGGACGGCTaGCTGCTTCTTTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTLVVDG*LLLCLG
Trigger: CCCCAAGCAAAGAAGCAGGCAGCCGTCCACCACTAG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACTAGTGGTGGACGGCTaGCTGCTTCTTTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPLVVDG*LLLCLG
Trigger: CCCCAAGCAAAGAAGCAGGCAGCCGTCCACCACTAG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTGGTTAGCGAGTGTTTaGGGGCTAGTGGTGGACGGC +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTWLASV*GLVVDG
Trigger: GCCGTCCACCACTAGCCCGCAAACACTCGCTAACCA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATCCCAAGCCTGGGCCATaGTCCCCCGCTGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDPKPGP*SPAEGL
Trigger: CAGCCCCTCAGCGGGGGAGCATGGCCCAGGCTTGGG...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGTCAAGTGCTGGGAGTaGAGAGGCAGGTGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTVKCWE*RGRWLK
Trigger: CTTCAGCCACCTGCCTCTGCACTCCCAGCACTTGAC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACCCCTGTCAGGTCGCTaGCACCCCCGGAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSPLSGR*HPRRSH
Trigger: GTGGCTTCTCCGGGGGTGGCAGCGACCTGACAGGGG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGAGGCTGATGTGGATGTaGCCTGGGCTCCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGRLMWM*PGLPTS
Trigger: GGAAGTGGGGAGCCCAGGGCACATCCACATCAGCCT...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGTGTTTGTGCCCCTCTaGCTGGGGACACTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIVFVPL*LGTLAF
Trigger: AAAGGCCAGTGTCCCCAGGCAGAGGGGCACAAACAC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGTGTTTGTGCCCCTCTaGCTGGGGACACTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDVFVPL*LGTLAF
Trigger: AAAGGCCAGTGTCCCCAGGCAGAGGGGCACAAACAC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGGGCCCTGCCACTTCTaGCTTTGTGGGTGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRGPCHF*LCGWFG
Trigger: ACCAAACCACCCACAAAGGCAGAAGTGGCAGGGCCC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGAAGCAGCCAGGAGCTaGTGGCTAACCCTGATTCCC +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPEAARS*WLTLIP
Trigger: GGGAATCAGGGTTAGCCAGCAGCTCCTGGCTGCTTC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGAGCCCCCGGTCTGCTaGTTTGTAGGTCTGGGGCAG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWEPPVC*FVGLGQ
Trigger: CTGCCCCAGACCTACAAAGCAGCAGACCGGGGGCTC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCCAGAGCCCCCGGTCTaGTGCTTTGTAGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWPEPPV*CFVGLG
Trigger: CCCCAGACCTACAAAGCAGCAGACCGGGGGCTCTGG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACCCCTGTGGCTTCTCTaGCTGAGCCTGACGGGCCCG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSPLWLL*LSLTGP
Trigger: CGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGGGG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGCCCAGAGGAGGGCGTaGATGGGGCGAGCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVAQRRA*MGRASF
Trigger: GAAAGACGCTCGCCCCATGCACGCCCTCCTCTGGGC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCAGCCACTGCCTCCTCTaGTGCTTCCCTCAACAGGCA +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTSHCLL*CFPQQA
Trigger: TGCCTGTTGAGGGAAGCAGCAGAGGAGGCAGTGGCT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTGCCAAGTCAGCCACTaGCTCCTCTGCTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTCQVSH*LLCCFP
Trigger: AGGGAAGCAGCAGAGGAGGCAGTGGCTGACTTGGCA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCCGTAGCAGGCATCTGTaGCAAGTCAGCCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIRSRHL*QVSHCL
Trigger: GAGGCAGTGGCTGACTTGGCACAGATGCCTGCTACG...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGTGCAGGCAGCTGGCTaGTGTCGGGCTCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTVQAAG*CRAPGG
Trigger: CCCTCCAGGAGCCCGACAGCAGCCAGCTGCCTGCAC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCTTACGGAGGCGACAGTaGAGGCAGCTGGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPLRRRQ*RQLAAV
Trigger: GACAGCAGCCAGCTGCCTGCACTGTCGCCTCCGTAA...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGCTGGATGCTGGGGGTaGCTCTTCTCCCCTTTAGTT +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPAGCWG*LFSPLV
Trigger: AACTAAAGGGGAGAAGAGCCACCCCCAGCATCCAGC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCAAGAGATGCCACGCTaGATGCTGGGGGTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRQEMPR*MLGVAL
Trigger: AAGAGCCACCCCCAGCATCCAGCGTGGCATCTCTTG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCTGGCCCAGTCATCCCTaGTCCTGGCACAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIWPSHP*SWHKRC
Trigger: GCATCTCTTGTGCCAGGACCAGGGATGACTGGGCCA...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGTCACTGGCTGTGAGTaGACTCGGAGCAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPVTGCE*TRSRSS
Trigger: TGATGACCTGCTCCGAGTCCACTCACAGCCAGTGAC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAAAACACTGGTCTGAATaGCCTCTCCTTTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAKHWSE*PLLWSA
Trigger: GGCTGACCAAAGGAGAGGCCATTCAGACCAGTGTTT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGAGCTGTGCCGCTGCCTaGGTATGGGACGCTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGSCAAA*VWDAGR
Trigger: TCTTCCAGCGTCCCATACCCAGGCAGCGGCACAGCT...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTTGGGCGGGGCTCTCTTaGGTGGCAGCTGTGCCGCTG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGWAGLS*VAAVPL
Trigger: CAGCGGCACAGCTGCCACCCAAGAGAGCCCCGCCCA...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGGGGCTAAGAGCTCTTaGGCGGGGCTCTCTTGGGTG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWGAKSS*AGLSWV
Trigger: CACCCAAGAGAGCCCCGCCCAAGAGCTCTTAGCCCC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGAGGCACGAAGACTTTaGGGACTCCAGGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPEARRL*GLQEGP
Trigger: AGGACCTTCCTGGAGTCCCCAAAGTCTTCGTGCCTC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGGCTTCAAGGAGACCTaGGAAGGACGAGGCACGAAG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDGFKET*EGRGTK
Trigger: CTTCGTGCCTCGTCCTTCCCAGGTCTCCTTGAAGCC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGGAGCACGCTGGGCTTaGCACAGGGCCGGCTGCAGT +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSGARWA*HRAGCS
Trigger: ACTGCAGCCGGCCCTGTGCCAAGCCCAGCGTGCTCC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGAGCGAATGTGCTTCTaGAGCACGCTGGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPERMCF*STLGLA
Trigger: TGCCAAGCCCAGCGTGCTCCAGAAGCACATTCGCTC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCCTGCTTTGATGCGGTaGGCATGGGACTTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRPALMR*AWDFLC
Trigger: GCACAGGAAGTCCCATGCCCACCGCATCAAAGCAGG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCAACAGCGTTCGTGGCTaGAACTGTGGCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTNSVRG*NCGSQS
Trigger: GCTCTGGGAGCCACAGTTCCAGCCACGAACGCTGTT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAACAGCGTTCGTGGCTaGAACTGTGGCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPNSVRG*NCGSQS
Trigger: GCTCTGGGAGCCACAGTTCCAGCCACGAACGCTGTT...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGTGTCTTCAGGTTTATaGCTCAGGGGGTGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAVSSGL*LRGCSD
Trigger: ATCTGAGCACCCCCTGAGCCATAAACCTGAAGACAC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCACTCCCTTTGCTGCCTaGGCTCAGAAACGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGITPFAA*AQKRLL
Trigger: GAGCAGGCGTTTCTGAGCCCAGGCAGCAAAGGGAGT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGCTTGGCGTTGGTGTTTaGGGGGCTGACCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGLGVGV*GADLLL
Trigger: GAGCAGCAGGTCAGCCCCCCAAACACCAACGCCAAG...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCAGGTGGCTGTCAGCATaGCGGTCCGCTGTCCTATTC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIRWLSA*RSAVLF
Trigger: GAATAGGACAGCGGACCGCCATGCTGACAGCCACCT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGCTCCCGGTAGAGGCTaGATTTTGGGGACTCCATGC +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRAPGRG*ILGTPC
Trigger: GCATGGAGTCCCCAAAATCCAGCCTCTACCGGGAGC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGTACTGGGCGGGTGCTaGAGGCTCAGCAGTGATTGT +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDVLGGC*RLSSDC
Trigger: ACAATCACTGCTGAGCCTCCAGCACCCGCCCAGTAC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCAATTCGATTGCCGGCTaGCGCTTCAGCATCCGGGGG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPNSIAG*RFSIRG
Trigger: CCCCCGGATGCTGAAGCGCCAGCCGGCAATCGAATT...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGGACTCAAAGGCAGGTaGCTCTTCCTCGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTGLKGR*LFLVPK
Trigger: CTTGGGGACGAGGAAGAGCCACCTGCCTTTGAGTCC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCAACCGGACCCTGGCTTaGGAGTCCTTGGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPNRTLA*ESLAGS
Trigger: GCTTCCAGCCAAGGACTCCCAAGCCAGGGTCCGGTT...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTTAGGGGGCGGCTCTaGCTCTGTGTCCGGCCGGTC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTLRGRL*LCVRPV
Trigger: GACCGGCCGGACACAGAGCCAGAGCCGCCCCCTAAG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGTGTCTGGCTGCGCTaGGGCCATTGGAACTCCTCA +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPSVWLR*GHWNSS
Trigger: TGAGGAGTTCCAATGGCCCCAGCGCAGCCAGACACT...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCAGTGTCTGGCTGCGCTaGGGCCATTGGAACTCCTCA +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTSVWLR*GHWNSS
Trigger: TGAGGAGTTCCAATGGCCCCAGCGCAGCCAGACACT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGGGACAGTCAACATGTaGGTGCCCAGGGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPGTVNM*VPRGLG
Trigger: CCCCAAACCCCTGGGCACCCACATGTTGACTGTCCC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCATGTGGGTGGTGGCTaGGGACAGTCAACATGTGGG +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTHVGGG*GQSTCG
Trigger: CCCACATGTTGACTGTCCCCAGCCACCACCCACATG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCTCTCGGGCATGTGGGTaGTGGCTGGGGACAGTCAAC +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPSRACG*WLGTVN
Trigger: GTTGACTGTCCCCAGCCACCACCCACATGCCCGAGA...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACAGAATGGGAAACGTTaGGGCTCTGCTCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPQNGKR*GSALRL
Trigger: CAGCCTCAGAGCAGAGCCCCAACGTTTCCCATTCTG...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGTCATGTGGGCAGAATaGGAAACGTTGGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPVMWAE*ETLGLC
Trigger: GCAGAGCCCCAACGTTTCCCATTCTGCCCACATGAC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGTCCACCATGTGAGGTaGCCGCAGAGGAAATCTGGG +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPVHHVR*PQRKSG
Trigger: CCCAGATTTCCTCTGCGGCCACCTCACATGGTGGAC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGGAGAAAAGGGAGACTaGTGGGGGCAGGTATGGCTT +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPGEKGD*WGQVWL
Trigger: AAGCCATACCTGCCCCCACCAGTCTCCCTTTTCTCC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTTCTGGAGACTGTCCTaGCTCATGCTGCACGAGATG +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAFWRLS*LMLHEM
Trigger: CATCTCGTGCAGCATGAGCCAGGACAGTCTCCAGAA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCATGCAGAACAGTAGGCTaGAGAGGAAGCGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPCRTVG*RGSGGA
Trigger: AGCCCCACCGCTTCCTCTCCAGCCTACTGTTCTGCA...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCATGAGCTGGGGGAGATaGAGTTGGCCTGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIMSWGR*SWPGCR
Trigger: TCTGCACCCAGGCCAACTCCATCTCCCCCAGCTCAT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGGGGCTTGCGGGAGCTaGATGGCACAAGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWGACGS*MAQAFL
Trigger: CAGGAAGGCTTGTGCCATCCAGCTCCCGCAAGCCCC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGCCGGCTCCCCTCTCTaGGAGGCAGGAGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTAGSPL*EAGASS
Trigger: GGAGGATGCTCCTGCCTCCCAGAGAGGGGAGCCGGC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCACATGGAGCAGCTGCTaGCTGTCAGGCGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGITWSSC*LSGAQL
Trigger: AAGCTGAGCGCCTGACAGCCAGCAGCTGCTCCATGT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGCCGGGGAGCATCGCTaGGGAGATGAGTCGTTTTTG +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRAGEHR*GDESFL
Trigger: CAAAAACGACTCATCTCCCCAGCGATGCTCCCCGGC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCAGACAGCTGAAGTCTTaGAGACCCACAAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAARQLKS*RPTRES
Trigger: GCTCTCCCTTGTGGGTCTCCAAGACTTCAGCTGTCT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCTGGAGACCATCTCCTaGTGGGCGAGTATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTLETIS*WASIWG
Trigger: TCCCCAGATACTCGCCCACCAGGAGATGGTCTCCAG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCGGGCCTGCACCATCTaGATCCCACCGATGGGAATC +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPRACTI*IPPMGI
Trigger: GATTCCCATCGGTGGGATCCAGATGGTGCAGGCCCG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGTTCCTCGTCCGGGCTaGGAAGCGGGCAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTVPRPG*EAGRGL
Trigger: GAGGCCTCTGCCCGCTTCCCAGCCCGGACGAGGAAC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGAGTCCTGCCTGGTCCTaGGTTCCCCGGAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWSPAWS*VPRRGS
Trigger: GGAACCTCTCCGGGGAACCCAGGACCAGGCAGGACT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGGAAGGTACAACAGATaGGGCCGTGAGAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPGRYNR*GRESSW
Trigger: CCAGGAGCTCTCACGGCCCCATCTGTTGTACCTTCC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCTCTGCCTGGGGACACTaGCCTTTCTGCTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGISAWGH*PFCWQR
Trigger: TCTCTGCCAGCAGAAAGGCCAGTGTCCCCAGGCAGA...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTCTGCCTGGGGACACTaGCCTTTCTGCTGGCAGAGA +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTSAWGH*PFCWQR
Trigger: TCTCTGCCAGCAGAAAGGCCAGTGTCCCCAGGCAGA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACACCAGCCACAGTTGTaGGTATTTCCTTGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAHQPQL*VFPWGS
Trigger: ACTACCCCAAGGAAATACCCACAACTGTGGCTGGTG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCATAGCTCAAGAGCCCTaGGGCAGGCACTTGATTCAC +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAIAQEP*GRHLIH
Trigger: GTGAATCAAGTGCCTGCCCCAGGGCTCTTGAGCTAT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAAAGCAGAGGGACTTCTaGGTCTGGAAGTTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAKQRDF*VWKLEL
Trigger: AAGCTCCAACTTCCAGACCCAGAAGTCCCTCTGCTT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCTCCATGAACTAGGTTaGGGCTGCTGGGTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDLHELG*GCWVCA
Trigger: GGCACAAACCCAGCAGCCTCAACCTAGTTCATGGAG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCGCGAGGCTCCTCCATaGACTAGGTTGAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWREAPP*TRLRLL
Trigger: CAGCAGCCTCAACCTAGTTCATGGAGGAGCCTCGCG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCAAGTGTCACTGGCTGTaGGTGGACTCGGAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPKCHWL*VDSEQV
Trigger: GACCTGCTCCGAGTCCACTCACAGCCAGTGACACTT...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCTCGCCACCCATGCCTaGGGCCAGGCCTGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVLATHA*GQACFD
Trigger: ATCAAAGCAGGCCTGGCCTCAGGCATGGGTGGCGAG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCACACTTGCCAAAGATaGTCTCAGCGTAGGACTTGG +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAHTCQR*SQRRTW
Trigger: CCAAGTCCTACGCTGAGATCATCTTTGGCAAGTGTG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGCTGCGCCTGGACAGTaGGCTCCGCCTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSAAPGQ*APPWLH
Trigger: GTGAAGCCAAGGCGGAGCTCACTGTCCAGGCGCAGC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTTTCTCACTGTGGGATaGCAGGGGCTCCCGGTAGAG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGFLTVG*QGLPVE
Trigger: CTCTACCGGGAGCCCCTGTCATCCCACAGTGAGAAA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGGCGGCAGAAGGCATTaGGTGGCTTCTCAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWGGRRH*VASQER
Trigger: CCTCTCCTGAGAAGCCACTCAATGCCTTCTGCCGCC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCCTCTCAAACGAGGCTaGGCGGCTGGACCCACTCAA +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWPLKRG*AAGPTQ
Trigger: TTGAGTGGGTCCAGCCGCTCAGCCTCGTTTGAGAGG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGCCCAGAAGACAGTGCTaGGGAGGTCGGGTATGGCAT +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGPRRQC*GGRVWH
Trigger: ATGCCATACCCGACCTCCTCAGCACTGTCTTCTGGG...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGACGGCATATTGGTCTaGACACGGACAGGCACAACC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIDGILV*TRTGTT
Trigger: GGTTGTGCCTGTCCGTGTTCAGACCAATATGCCGTC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGACGGCATATTGGTCTaGACACGGACAGGCACAACC +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTDGILV*TRTGTT
Trigger: GGTTGTGCCTGTCCGTGTTCAGACCAATATGCCGTC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACTTCCTTCAAAGCTTCTaGGCCTGGGGCTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDFLQSF*AWGCPM
Trigger: CATGGGACAGCCCCAGGCTCAGAAGCTTTGAAGGAA...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGTCAACCCTCTTCGGTaGGGTTTGCCAGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGVNPLR*GLPDGW
Trigger: CCAGCCATCTGGCAAACCTCACCGAAGAGGGTTGAC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGTCCGTACCTTCTTGTaGCTTGGCTGGTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIVRTFL*LGWSGG
Trigger: TCCTCCAGACCAGCCAAGTCACAAGAAGGTACGGAC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTCTCTGGGCTTCTGCTaGGGAGCTTGTGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTSLGFC*GACEVE
Trigger: CTCTACCTCACAAGCTCCTCAGCAGAAGCCCAGAGA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGCCCGCCCTCCAGCTCTaGGGAGAGTGTGAATTTGGA +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGPALQL*GECEFG
Trigger: TCCAAATTCACACTCTCCTCAGAGCTGGAGGGCGGG...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGCCAGGATGGGCCCATaGCTCAGACTACCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPARMGP*LRLPEY
Trigger: ATACTCTGGTAGTCTGAGTCATGGGCCCATCCTGGC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGGAAAAACCCAGCCATaGGGGGAACAGGCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGGKTQP*GEQAPL
Trigger: CAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGGAAAAACCCAGCCATaGGGGGAACAGGCTCCCTTG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPGKTQP*GEQAPL
Trigger: CAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTCTGTGGTGGCTGGGTaGAGTATCAAACACCATCCT +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAASVVAG*SIKHHP
Trigger: AGGATGGTGTTTGATACTTCACCCAGCCACCACAGA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGTCCCCCGTGTGCTATaGAAACGGTTGAAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPVPRVL*KRLKVG
Trigger: TCCAACCTTCAACCGTTTGCATAGCACACGGGGGAC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGCTGGTGTCAGAGGGTaGTGCGGAAGCTGTGAGATG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPAGVRG*CGSCEM
Trigger: CATCTCACAGCTTCCGCAGCACCCTCTGACACCAGC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGATGGGGTCAACCAGTTaGCATGTGGACCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGMGSTS*HVDPSR
Trigger: CCTGGAGGGGTCCACATGGCAACTGGTTGACCCCAT...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACACTGGCAGATGTACTTaGCTGGCTTCTGGGGCTTCC +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDTGRCT*LASGAS
Trigger: GGAAGCCCCAGAAGCCAGGCAAGTACATCTGCCAGT...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCGAGTGACTGGGCTGTaGTGGACTGGGACAGGGAAC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWRVTGL*WTGTGN
Trigger: GTTCCCTGTCCCAGTCCAGCACAGCCCAGTCACTCG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCGGAGGGCCAGCTTCTaGTTAATCGTGTGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRRRASF*LIVWVS
Trigger: AGACACCCACACGATTAAGCAGAAGCTGGCCCTCCG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCCAGTACTCCCTTTGCTaGCTGGGCTCAGAAACGCCT +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIQYSLC*LGSETP
Trigger: AGGCGTTTCTGAGCCCAGGCAGCAAAGGGAGTACTG...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAACTCAGTACTCCCTTTaGTGCCTGGGCTCAGAAACG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPTQYSL*CLGSET
Trigger: CGTTTCTGAGCCCAGGCAGCAAAGGGAGTACTGAGT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACACTCAAAGAGACATTaGTTTCCTGGCTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPHSKRH*FPGSGC
Trigger: GCAGCCCGAGCCAGGAAAGCAATGTCTCTTTGAGTG...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCAGATTCTGGAGGCCTaGTCAGAGAGGCCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDQILEA*SERPVS
Trigger: TGAGACAGGCCTCTCTGAGCAGGCCTCCAGAATCTG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCAGATTCTGGAGGCCTaGTCAGAGAGGCCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTQILEA*SERPVS
Trigger: TGAGACAGGCCTCTCTGAGCAGGCCTCCAGAATCTG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACAGGTATGGCTTCTCATaGAGGGGTGTCTGGGCAACG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDRYGFS*RGVWAT
Trigger: CGTTGCCCAGACACCCCTGCATGAGAAGCCATACCT...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGACTGTCCTGGCTCATaGTGCACGAGATGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTDCPGS*CTRCWK
Trigger: CTTCCAGCATCTCGTGCAGCATGAGCCAGGACAGTC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGACTGTCCTGGCTCATaGTGCACGAGATGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIDCPGS*CTRCWK
Trigger: CTTCCAGCATCTCGTGCAGCATGAGCCAGGACAGTC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTGGAGTTGGCCTGGGTaGAGAACAGTAGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRWSWPG*RTVGWR
Trigger: TCTCCAGCCTACTGTTCTGCACCCAGGCCAACTCCA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCAACCTCATGCACATCTaGACCACATACAGTCGTCCC +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAANLMHI*TTYSRP
Trigger: GGGACGACTGTATGTGGTGCAGATGTGCATGAGGTT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGTGAAAGGACACGTTTaGTTCCCCCTGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAVKGHV*FPLLLM
Trigger: CATCAACAGCAGGGGGAAGCAAACGTGTCCTTTCAC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACTTTCTAGCTCCCTCCTaGCTTGGCCCTGGTTGCCTA +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDFLAPS*LGPGCL
Trigger: TAGGCAACCAGGGCCAAGGCAGGAGGGAGCTAGAAA...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCAGAGAGCTCGGAGGTaGCAAGGAGGGGAGATCAGG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWQRARR*QGGEIR
Trigger: CCTGATCTCCCCTCCTTGGCACCTCCGAGCTCTCTG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTGGCACAAGCCTTCCTaGCTCAGGATGCGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGWHKPS*LRMRSC
Trigger: ACAGCTCCGCATCCTGAGGCAGGAAGGCTTGTGCCA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGGTGAACCTCTGTCATaGGGGGCTTGCGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVGEPLS*GACGSW
Trigger: CCAGCTCCCGCAAGCCCCGCATGACAGAGGTTCACC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATGTGTTTCTTCAGCATaGTGGGCTTCTTGCAGCGAA +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRACVSSA*WASCSE
Trigger: TTCGCTGCAAGAAGCCCAGCATGCTGAAGAAACACA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACAAAGTGACAGTGCTTaGACACATAGGGCCGGACGT +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPQSDSA*THRAGR
Trigger: ACGTCCGGCCCTATGTGTGCAAGCACTGTCACTTTG...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATCTCTTGGCACTTTTTaGTGTGGGCCTTCGACTTCA +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRASLGTF*CGPSTS
Trigger: TGAAGTCGAAGGCCCACAGCAAAAAGTGCCAAGAGA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGGAGTCTGCCCGCAGTaGATGTGGTGGGCCAGGCGG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDGVCPQ*MWWARR
Trigger: CCGCCTGGCCCACCACATGCACTGCGGGCAGACTCC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGCTAGTGGTGGACGGCTaGCTGCTTCTTTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGLVVDG*LLLCLG
Trigger: CCCCAAGCAAAGAAGCAGGCAGCCGTCCACCACTAG...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTGGTTAGCGAGTGTTTaGGGGCTAGTGGTGGACGGC +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGWLASV*GLVVDG
Trigger: GCCGTCCACCACTAGCCCGCAAACACTCGCTAACCA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATGTGGGCTCTGCAGGTaGCCCGGTCCCATGGGGTGT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTCGLCR*PGPMGC
Trigger: ACACCCCATGGGACCGGGGCACCTGCAGAGCCCACA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGGGCCCTGCCACTTCTaGCTTTGTGGGTGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGGPCHF*LCGWFG
Trigger: ACCAAACCACCCACAAAGGCAGAAGTGGCAGGGCCC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCACTCCCAGGGAGCCCTaGCTTCTGTCTCATTTTTGT +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAATPREP*LLSHFC
Trigger: ACAAAAATGAGACAGAAGGCAGGGCTCCCTGGGAGT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGAAGCAGCCAGGAGCTaGTGGCTAACCCTGATTCCC +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGEAARS*WLTLIP
Trigger: GGGAATCAGGGTTAGCCAGCAGCTCCTGGCTGCTTC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAAAGCAATGCCCTTTATaGAGCTCCCAGACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPKQCPL*SSQTSA
Trigger: GGCTGAGGTCTGGGAGCTGCATAAAGGGCATTGCTT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCCAGAGCCCCCGGTCTaGTGCTTTGTAGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVPEPPV*CFVGLG
Trigger: CCCCAGACCTACAAAGCAGCAGACCGGGGGCTCTGG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGTGCAGGCAGCTGGCTaGTGTCGGGCTCCTGGAGGG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDVQAAG*CRAPGG
Trigger: CCCTCCAGGAGCCCGACAGCAGCCAGCTGCCTGCAC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGCTGGATGCTGGGGGTaGCTCTTCTCCCCTTTAGTT +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIAGCWG*LFSPLV
Trigger: AACTAAAGGGGAGAAGAGCCACCCCCAGCATCCAGC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCAGTCATCCCTGGTCCTaGCACAAGAGATGCCACGCT +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTSHPWS*HKRCHA
Trigger: AGCGTGGCATCTCTTGTGCCAGGACCAGGGATGACT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACAGTCATCCCTGGTCCTaGCACAAGAGATGCCACGCT +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDSHPWS*HKRCHA
Trigger: AGCGTGGCATCTCTTGTGCCAGGACCAGGGATGACT...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTTGTATTGTTTCAGCTaGCAGTGGCAGGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRLYCFS*QWQVAP
Trigger: GGGGGCCACCTGCCACTGCCAGCTGAAACAATACAA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCAGCTTTGGCCACATTaGTCAAGAGCTGTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDQLWPH*SRAVGA
Trigger: GGCTCCCACAGCTCTTGACCAATGTGGCCAAAGCTG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCAAACACTGGTCTGAATaGCCTCTCCTTTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAKHWSE*PLLWSA
Trigger: GGCTGACCAAAGGAGAGGCCATTCAGACCAGTGTTT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGCCGCTGCCTGGGTATaGGACGCTGGAAGAAACACT +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPAAAWV*DAGRNT
Trigger: AGTGTTTCTTCCAGCGTCCCATACCCAGGCAGCGGC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGAGGCACGAAGACTTTaGGGACTCCAGGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDEARRL*GLQEGP
Trigger: AGGACCTTCCTGGAGTCCCCAAAGTCTTCGTGCCTC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTGTGTGCCTCTTCTGTaGGCTTCAAGGAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTCVPLL*ASRRPG
Trigger: CCCAGGTCTCCTTGAAGCCCACAGAAGAGGCACACA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGCAGATGTACTTGCCTaGCTTCTGGGGCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRADVLA*LLGLPL
Trigger: GAGAGGAAGCCCCAGAAGCCAGGCAAGTACATCTGC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCATCTCCAGCCCATGTaGGTACATCTCGCCACCCAT +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTHLQPM*VHLATH
Trigger: ATGGGTGGCGAGATGTACCCACATGGGCTGGAGATG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACATCTCCAGCCCATGTaGGTACATCTCGCCACCCAT +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPHLQPM*VHLATH
Trigger: ATGGGTGGCGAGATGTACCCACATGGGCTGGAGATG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCAGCTGTATAGCCCGCTaGAGAGAAGGGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPSCIAR*REGAAW
Trigger: CCAAGCAGCCCCTTCTCTCCAGCGGGCTATACAGCT...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCTTGGCGTTGGTGTTTaGGGGGCTGACCTGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWLGVGV*GADLLL
Trigger: GAGCAGCAGGTCAGCCCCCCAAACACCAACGCCAAG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCAGGTGGCTGTCAGCATaGCGGTCCGCTGTCCTATTC +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPRWLSA*RSAVLF
Trigger: GAATAGGACAGCGGACCGCCATGCTGACAGCCACCT...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCTTGGTTTTCTCACTGTaGGATGACAGGGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGILVFSL*DDRGSR
Trigger: CCGGGAGCCCCTGTCATCCCACAGTGAGAAAACCAA...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGAACCGGACCCTGGCTTaGGAGTCCTTGGCTGGAAGC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWNRTLA*ESLAGS
Trigger: GCTTCCAGCCAAGGACTCCCAAGCCAGGGTCCGGTT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACAGAGGACTCGAAGCTaGACTCCCCTGATGATTGGG +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPQRTRS*TPLMIG
Trigger: CCCAATCATCAGGGGAGTCCAGCTTCGAGTCCTCTG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGAGACATTGCTTTCCTaGCTCGGGCTGCGAGACAGA +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPETLLS*LGLRDR
Trigger: TCTGTCTCGCAGCCCGAGCCAGGAAAGCAATGTCTC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGAGACATTGCTTTCCTaGCTCGGGCTGCGAGACAGA +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIETLLS*LGLRDR
Trigger: TCTGTCTCGCAGCCCGAGCCAGGAAAGCAATGTCTC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACACGAGGCTGAGCGGCTaGACCCACTCAAAGAGACAT +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDTRLSG*THSKRH
Trigger: ATGTCTCTTTGAGTGGGTCCAGCCGCTCAGCCTCGT...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGCCTCGGCTTTCCCATaGTCATCCCTCTCAAACGAG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDASAFP*SSLSNE
Trigger: CTCGTTTGAGAGGGATGACCATGGGAAAGCCGAGGC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCTGTCAGATGAGGGACTaGGGGCCTCGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPCQMRD*GPRLSH
Trigger: ATGGGAAAGCCGAGGCCCCCAGTCCCTCATCTGACA...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACAGAATGGGAAACGTTaGGGCTCTGCTCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPQNGKR*GSALRL
Trigger: CAGCCTCAGAGCAGAGCCCCAACGTTTCCCATTCTG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGTCATGTGGGCAGAATaGGAAACGTTGGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPVMWAE*ETLGLC
Trigger: GCAGAGCCCCAACGTTTCCCATTCTGCCCACATGAC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACGTGTCTCGGTCATGTaGGCAGAATGGGAAACGTTG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPRVSVM*AEWETL
Trigger: CAACGTTTCCCATTCTGCCCACATGACCGAGACACG...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCTGTGTAGGGCACAGTaGGCCCCAATGGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVLCRAQ*APMGAC
Trigger: ACAGGCCCCCATTGGGGCCCACTGTGCCCTACACAG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGTCATGCAGGGGTGTCTaGGCAACGGGGTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWSCRGV*ATGWWN
Trigger: GTTCCACCACCCCGTTGCCCAGACACCCCTGCATGA...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGAAAAGGGAGACTGGTaGGGGCAGGTATGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPREKGDW*GQVWLL
Trigger: GAGAAGCCATACCTGCCCCCACCAGTCTCCCTTTTC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGAAAAGGGAGACTGGTaGGGGCAGGTATGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDEKGDW*GQVWLL
Trigger: GAGAAGCCATACCTGCCCCCACCAGTCTCCCTTTTC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGGAGAAAAGGGAGACTaGTGGGGGCAGGTATGGCTT +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIGEKGD*WGQVWL
Trigger: AAGCCATACCTGCCCCCACCAGTCTCCCTTTTCTCC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTGGGGGAGATGGAGTTaGCCTGGGTGCAGAACAGTA +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRWGRWS*PGCRTV
Trigger: TACTGTTCTGCACCCAGGCCAACTCCATCTCCCCCA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCTGGGGGAGATGGAGTTaGCCTGGGTGCAGAACAGTA +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIWGRWS*PGCRTV
Trigger: TACTGTTCTGCACCCAGGCCAACTCCATCTCCCCCA...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGGACACCATGGTGTCTaGACAGGCAGGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVGHHGV*TGRQGQ
Trigger: CTGGCCCTGCCTGCCTGTCCAGACACCATGGTGTCC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATGGGTGACCAAGATCTaGGAAAGGGTGGTGTACATT +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAWVTKI*ERVVYI
Trigger: AATGTACACCACCCTTTCCCAGATCTTGGTCACCCA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCTCCTGCCTTGGCCCTaGTTGCCTAAGTGGGATTTC +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTLLPWP*LPKWDF
Trigger: GAAATCCCACTTAGGCAACCAGGGCCAAGGCAGGAG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGATCTGAGGACAGGCTaGACAGCATTTCTAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPDLRTG*TAFLAP
Trigger: GGGAGCTAGAAATGCTGTCCAGCCTGTCCTCAGATC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGCGGAGCTGTGGCCATaGTGTATGTCTCTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPAELWP*CMSLCS
Trigger: TGAGCAAAGAGACATACACCATGGCCACAGCTCCGC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCTGGACAGCTCATCCTaGCTCTCCTCCTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTLDSSS*LSSSSS
Trigger: TGAGGATGAGGAGGAGAGCCAGGATGAGCTGTCCAG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCCTCTGAGGATGGTCTaGACAGCTCATCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDPLRMV*TAHPGS
Trigger: AGAGCCAGGATGAGCTGTCCAGACCATCCTCAGAGG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCCTCTGAGGATGGTCTaGACAGCTCATCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRPLRMV*TAHPGS
Trigger: AGAGCCAGGATGAGCTGTCCAGACCATCCTCAGAGG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCCGCAGTGCATGTGGTaGGCCAGGCGGGGGCGCCTC +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFPQCMW*ARRGRL
Trigger: GAGGCGCCCCCGCCTGGCCCACCACATGCACTGCGG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCTGCCCGCAGTGCATGTaGTGGGCCAGGCGGGGGCGC +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFCPQCM*WARRGR
Trigger: GCGCCCCCGCCTGGCCCACCACATGCACTGCGGGCA...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGAGACCATCTCCTGGTaGGCGAGTATCTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWETISW*ASIWGG
Trigger: GCCTCCCCAGATACTCGCCCACCAGGAGATGGTCTC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGTGGCCGTGGAAGTCATaGAGGGCGGAGAAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVWPWKS*RAEKGR
Trigger: CCGACCCTTCTCCGCCCTCCATGACTTCCACGGCCA...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGAGTGCAGAGGCAGGTaGCTGAAGATGTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPECRGR*LKMFSS
Trigger: AGAGGAGAACATCTTCAGCCACCTGCCTCTGCACTC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTCTGGATCCCACCGATaGGAATCAAGGGACATGGGG +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTSGSHR*ESRDMG
Trigger: CCCCATGTCCCTTGATTCCCATCGGTGGGATCCAGA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCTGACGAGCTCTCAGTaGGACTCCAGCGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVLTSSQ*DSSGLA
Trigger: AGCGAGGCCGCTGGAGTCCCACTGAGAGCTCGTCAG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGAGTCCTGCCTGGTCCTaGGTTCCCCGGAGAGGTTCC +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVSPAWS*VPRRGS
Trigger: GGAACCTCTCCGGGGAACCCAGGACCAGGCAGGACT...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTTGGGGGAGTCCTGCCTaGTCCTGGGTTCCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGWGSPA*SWVPRR
Trigger: TCTCCGGGGAACCCAGGACCAGGCAGGACTCCCCCA...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCATGGGGCTGAGGAAGTaGGATGATTCGAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAMGLRK*DDSRKV
Trigger: CACTTTCCTCGAATCATCCCACTTCCTCAGCCCCAT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGGCCGTGAGAGCTCCTaGACGGAGGGACAGATGGGG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGGRESS*TEGQMG
Trigger: CCCCATCTGTCCCTCCGTCCAGGAGCTCTCACGGCC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGTTGTGCCCCTCTGCCTaGGGACACTGGCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWLCPSA*GHWPFC
Trigger: GCAGAAAGGCCAGTGTCCCCAGGCAGAGGGGCACAA...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACCTCGGTCAGGGGCTTaGGAGCCAGGGACGGACAGT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTPRSGA*EPGTDS
Trigger: ACTGTCCGTCCCTGGCTCCCAAGCCCCTGACCGAGG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACTCACCTCTCCCAGTTaGGGCGAACACGCTAGAGTT +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPLTSPS*GEHARV
Trigger: AACTCTAGCGTGTTCGCCCCAACTGGGAGAGGTGAG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGATTCCCCAGAACCCTaGAGCACAGTGGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGDSPEP*STVDSQ
Trigger: CTGGGAGTCCACTGTGCTCCAGGGTTCTGGGGAATC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGCAGCCAGGAGCTGCTaGCTAACCCTGATTCCCCAG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWAARSC*LTLIPQ
Trigger: CTGGGGAATCAGGGTTAGCCAGCAGCTCCTGGCTGC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGCAATATGGACAGTGTaGTCCAGGCTGGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIAIWTV*SRLGLL
Trigger: CAGCAAGCCCAGCCTGGACCACACTGTCCATATTGC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGAAAGCCCTGGCCTCCTaGGACTTGGAGGAGTCACTT +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRKALAS*DLEESL
Trigger: AAGTGACTCCTCCAAGTCCCAGGAGGCCAGGGCTTT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGAAGTCTCCAATCCGTaGGCAGTCCCATGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTEVSNP*AVPWVR
Trigger: CCTAACCCATGGGACTGCCCACGGATTGGAGACTTC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACCAGGGAGGAAACCTTaGGTGGGTAGGCTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPPGRKP*VGRLFE
Trigger: CTCAAACAGCCTACCCACCCAAGGTTTCCTCCCTGG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGGCACGGCATCAATGTaGAGGCAGCCCTTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPGTASM*RQPFGE
Trigger: CTCACCAAAGGGCTGCCTCCACATTGATGCCGTGCC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCATTGGTTCTGTCCCTCTaGGCACGGCATCAATGTGGA +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPLVLSL*ARHQCG
Trigger: TCCACATTGATGCCGTGCCCAGAGGGACAGAACCAA...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGTCTGTACCGAGGAATaGCCACCCCGCGCATTTCAA +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIVCTEE*PPRAFQ
Trigger: TTGAAATGCGCGGGGTGGCCATTCCTCGGTACAGAC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGAAACCTCGACCAGTTaGTTCCTCCCCCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGETSTS*FLPHCP
Trigger: TGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACGTGGAGCGCAGGCCTaGGGGGCAAGGACTCACCAA +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSRGAQA*GARTHQ
Trigger: TTGGTGAGTCCTTGCCCCCCAGGCCTGCGCTCCACG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGGGAGCAGAGAGGAGTaGGGTTACTACCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGGSREE*GYYPGW
Trigger: CCATCCTGGGTAGTAACCCCACTCCTCTCTGCTCCC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAACACAGAAGCAGAATTaGTGGAACAGGCTTTCGGGA +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRATQKQN*WNRLSG
Trigger: TCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCTTGGAGAACTGTGTTaGAGGGAGGCCTTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTLGELC*REAFGL
Trigger: AAGGCCGAAGGCCTCCCTCCAACACAGTTCTCCAAG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372583.6
3UTR CAA 72 bp CAGCAAACAGGTCCAGGCCGTATCCACCAGCCACAGTaGTGGGTATTTCCTTGGGGTAGTGGAGACAGGGGC +
Preference number: 4 (lower is better)
Translates to: QQTGPGRIHQPQ*WVFPWGSGDRG
Trigger: GCCCCTGTCTCCACTACCCCAAGGAAATACCCACAACTGTGGCTGGTGGATACGGCCTGGACCTGTTTGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCAAACGCTGTTCTCTCTaGAAGCCAGCATTCATGTCC +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAKRCSL*KPAFMS
Trigger: GGACATGAATGCTGGCTTTCAGAGAGAACAGCGTTT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCCAGCACTTTCTGCCTaGATGTCTGTCGGGAAAACG +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRPALSA*MSVGKT
Trigger: CGTTTTCCCGACAGACATTCAGGCAGAAAGTGCTGG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGGCGGGCTGCATTTATaGATAATCCCAGTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPGGLHL*IIPVSQ
Trigger: TTGGGACACTGGGATTATTCATAAATGCAGCCCGCC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTGGCCCGTTTTCTCCTaGGAGCCTTCCCTAAGAACT +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRWPVFS*EPSLRT
Trigger: AGTTCTTAGGGAAGGCTCTCAGGAGAAAACGGGCCA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGTTTGCCAGGCGACATaGATGCTGGTGTCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGVCQAT*MLVSEG
Trigger: ACCCTCTGACACCAGCATTCATGTCGCCTGGCAAAC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGATTACTCTTGGTCTTaGAGGAGAAGCCACAGGGGC +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDDYSWS*RRSHRG
Trigger: GCCCCTGTGGCTTCTCCTTCAAGACCAAGAGTAATC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGTTTCTCACTGTGGGATaGCAGGGGCTCCCGGTAGAG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWFLTVG*QGLPVE
Trigger: CTCTACCGGGAGCCCCTGTCATCCCACAGTGAGAAA...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACTGGAGGCTCAGCAGTaGTTGTTCAGGCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPLEAQQ*LFRLGF
Trigger: AAAACCAAGCCTGAACAATCACTGCTGAGCCTCCAG...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCCGGGGCTGCCAAACTaGCTTTTTGTGGACTCAAAG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDPGLPN*LFVDSK
Trigger: CTTTGAGTCCACAAAAAGTCAGTTTGGCAGCCCCGG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCGGGGGTCCACCATGTaGGGTGGCCGCAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGRGSTM*GGRRGN
Trigger: ATTTCCTCTGCGGCCACCTCACATGGTGGACCCCCG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACGGGGGTCCACCATGTaGGGTGGCCGCAGAGGAAAT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTRGSTM*GGRRGN
Trigger: ATTTCCTCTGCGGCCACCTCACATGGTGGACCCCCG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAACATCACCAGGGAGCTaGAGTGCAAACTGGGATTGC +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPTSPGS*SANWDC
Trigger: GCAATCCCAGTTTGCACTTCAGCTCCCTGGTGATGT...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCATACAGTCGTCCCCTTTaGTGGGGGTTCCTCAAACTT +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPYSRPL*WGFLKL
Trigger: AAGTTTGAGGAACCCCCATCAAAGGGGACGACTGTA...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCCTTGTAGCTCAAGGCTaGGCCTGTGTCTTTCTCCAC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGILVAQG*ACVFLH
Trigger: GTGGAGAAAGACACAGGCTCAGCCTTGAGCTACAAG...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGTGAGAGGAGACAGCTaGAGTCTTGGAGACCCACAA +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPVRGDS*SLGDPQ
Trigger: TTGTGGGTCTCCAAGACTTCAGCTGTCTCCTCTCAC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACCAGGGGGCAGAGGGTaGGAGGAGACAGCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSPGGRG*EETAEV
Trigger: GACTTCAGCTGTCTCCTCTCACCCTCTGCCCCCTGG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACCAGGGGGCAGAGGGTaGGAGGAGACAGCTGAAGTC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTPGGRG*EETAEV
Trigger: GACTTCAGCTGTCTCCTCTCACCCTCTGCCCCCTGG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTCTCTGGGCTTCTGCTaGGGAGCTTGTGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGSLGFC*GACEVE
Trigger: CTCTACCTCACAAGCTCCTCAGCAGAAGCCCAGAGA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAACCCTGTCCTCAGGCTaGTGTGGATGTGCCCTGGGC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTTLSSG*CGCALG
Trigger: GCCCAGGGCACATCCACATCAGCCTGAGGACAGGGT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGCCAGGATGGGCCCATaGCTCAGACTACCAGAGTAT +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGARMGP*LRLPEY
Trigger: ATACTCTGGTAGTCTGAGTCATGGGCCCATCCTGGC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGTGGCAAAGTGGTCCTaGAACAGTTCCCCGCAAACC +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGVAKWS*NSSPQT
Trigger: GGTTTGCGGGGAACTGTTTCAGGACCACTTTGCCAC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGGCAAGGTTTGGCTCTaGAACCTCGACCAGTTGGTT +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPGKVWL*NLDQLV
Trigger: AACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAAGAGTCGGCTGGTTGTaGGCATGCTCGCGCCGGGAA +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTRVGWL*ACSRRE
Trigger: TTCCCGGCGCGAGCATGCTCACAACCAGCCGACTCT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS-3UTR GCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATTGGCAGCTGTGCCGCTaGCTGGGTATGGGACGCTGG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDWQLCR*LGMGRW
Trigger: CCAGCGTCCCATACCCAGGCAGCGGCACAGCTGCCA...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGGGCTCAGAAACGCCTaGTCATCGATCACCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPGLRNA*SSITFF
Trigger: GAAGAAGGTGATCGATGAGCAGGCGTTTCTGAGCCC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCACTCAAAGAGACATTaGTTTCCTGGCTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTHSKRH*FPGSGC
Trigger: GCAGCCCGAGCCAGGAAAGCAATGTCTCTTTGAGTG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGCAGATTCTGGAGGCCTaGTCAGAGAGGCCTGTCTCA +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGQILEA*SERPVS
Trigger: TGAGACAGGCCTCTCTGAGCAGGCCTCCAGAATCTG...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTGTCCTGGCTCATGCTaGACGAGATGCTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGCPGSC*TRCWKE
Trigger: CTCCTTCCAGCATCTCGTGCAGCATGAGCCAGGACA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCTGGAGGCTGGGGAACTaGAGTACCTTCTTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIWRLGN*STFFES
Trigger: GGACTCAAAGAAGGTACTGCAGTTCCCCAGCCTCCA...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGCATGCTGGGCTTCTTaGAGCGAATTCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDACWAS*SEFHTP
Trigger: AGGAGTGTGGAATTCGCTGCAAGAAGCCCAGCATGC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGGACGTCAGTGTGGGTaGGGATGTGTTTCTTCAGCA +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIGRQCG*GCVSSA
Trigger: TGCTGAAGAAACACATCCGCACCCACACTGACGTCC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGAGGTCCGAAAACTGGTaGTCCTCCACAGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRRSENW*SSTASE
Trigger: TTCAGAGGCTGTGGAGGAGCACCAGTTTTCGGACCT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGGCTGCCTGCTTCTTTaGTTGGGGACCACGGTCTTC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWGCLLL*LGTTVF
Trigger: GAAGACCGTGGTCCCCAAGCAAAGAAGCAGGCAGCC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAAAGGGAGAGCGCCCATaGCCCTTCCTGGGTCCACGT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTKGERP*PFLGPR
Trigger: ACGTGGACCCAGGAAGGGGCATGGGCGCTCTCCCTT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCCCAAGCCTGGGCCATaGTCCCCCGCTGAGGGGCTG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFPKPGP*SPAEGL
Trigger: CAGCCCCTCAGCGGGGGAGCATGGCCCAGGCTTGGG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTTCCCCGCAAACCTCTaGTGTGGAGAACTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAFPANL*CGELEK
Trigger: TTTTTCCAGTTCTCCACAGCAGAGGTTTGCGGGGAA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGGGGCAGGAAGAGCTTaGCCAGGCAGATTTCTAACC +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPGAGRA*PGRFLT
Trigger: GGTTAGAAATCTGCCTGGGCAAGCTCTTCCTGCCCC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCAGGGGGTTAGAGCTGTaGCCAGTGACATATACCCAG +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTRGLEL*PVTYTQ
Trigger: CTGGGTATATGTCACTGGGCACAGCTCTAACCCCCT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCACTGCCTCCTCTGCTaGTTCCCTCAACAGGCACAA +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPHCLLC*FPQQAQ
Trigger: TTGTGCCTGTTGAGGGAAGCAGCAGAGGAGGCAGTG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGTCCCCAAGGACAGGTaGTCAGCCAGGACTTTTGCT +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPVPKDR*SARTFA
Trigger: AGCAAAAGTCCTGGCTGAGCACCTGTCCTTGGGGAC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAACCAAACTAGGCAGCTaGATAATGGGAGAGTCGGCT +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPTKLGS*IMGESA
Trigger: AGCCGACTCTCCCATTATCCAGCTGCCTAGTTTGGT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372583.6
ENST00000372584.5
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCAAGAGATGCCACGCTaGATGCTGGGGGTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWQEMPR*MLGVAL
Trigger: AAGAGCCACCCCCAGCATCCAGCGTGGCATCTCTTG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCAAACGGTTGAAGGTTaGAGACATCTGTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAQTVEG*RHLCPW
Trigger: CCATGGACACAGATGTCTCCAACCTTCAACCGTTTG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGCTGGCAGTGGCAGGTaGCCCCCACGAGTCCCCCGT +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFAGSGR*PPRVPR
Trigger: ACGGGGGACTCGTGGGGGCCACCTGCCACTGCCAGC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGTCACTGGCTGTGAGTaGACTCGGAGCAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPVTGCE*TRSRSS
Trigger: TGATGACCTGCTCCGAGTCCACTCACAGCCAGTGAC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACATTGGTCAAGAGCTGTaGGAGCCAAACCCAAGACGG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDIGQEL*EPNPRR
Trigger: CCGTCTTGGGTTTGGCTCCCACAGCTCTTGACCAAT...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGGAGGTGTCCAGCTTTaGCCACATTGGTCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPGGVQL*PHWSRA
Trigger: AGCTCTTGACCAATGTGGCCAAAGCTGGACACCTCC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGGAGGTGTCCAGCTTTaGCCACATTGGTCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTGGVQL*PHWSRA
Trigger: AGCTCTTGACCAATGTGGCCAAAGCTGGACACCTCC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGCAACCAGTTGCCATGTaGACCCCTCCAGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGQPVAM*TPPGDA
Trigger: AGCATCTCCTGGAGGGGTCCACATGGCAACTGGTTG...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCAACCAGTTGCCATGTaGACCCCTCCAGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPQPVAM*TPPGDA
Trigger: AGCATCTCCTGGAGGGGTCCACATGGCAACTGGTTG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGGAATGATGGAAGCGTaGGAAGGAAGGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPGMMEA*EGRSWL
Trigger: GAGCCAGCTCCTTCCTTCCCACGCTTCCATCATTCC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGGAATGATGGAAGCGTaGGAAGGAAGGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGGMMEA*EGRSWL
Trigger: GAGCCAGCTCCTTCCTTCCCACGCTTCCATCATTCC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGAGGCACGAAGACTTTaGGGACTCCAGGAAGGTCCT +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGEARRL*GLQEGP
Trigger: AGGACCTTCCTGGAGTCCCCAAAGTCTTCGTGCCTC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTGTGTGCCTCTTCTGTaGGCTTCAAGGAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGCVPLL*ASRRPG
Trigger: CCCAGGTCTCCTTGAAGCCCACAGAAGAGGCACACA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGTGACTGGGCTGTGCTaGACTGGGACAGGGAACAGC +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVVTGLC*TGTGNS
Trigger: GCTGTTCCCTGTCCCAGTCCAGCACAGCCCAGTCAC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCACAAAGGCACCAGGCTaGGCTTGTCTTCGGTGGACA +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPTKAPG*ACLRWT
Trigger: TGTCCACCGAAGACAAGCCCAGCCTGGTGCCTTTGT...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGACAAAGGCACCAGGCTaGGCTTGTCTTCGGTGGACA +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGTKAPG*ACLRWT
Trigger: TGTCCACCGAAGACAAGCCCAGCCTGGTGCCTTTGT...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTTGGTTTTCTCACTGTaGGATGACAGGGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGLVFSL*DDRGSR
Trigger: CCGGGAGCCCCTGTCATCCCACAGTGAGAAAACCAA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGCAGAAGGCATTGAGTaGCTTCTCAGGAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTAEGIE*LLRRGT
Trigger: TGTGCCTCTCCTGAGAAGCCACTCAATGCCTTCTGC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTGTGTCTTTGCTGCTTaGGCCAGGCTCCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTCVFAA*ARLLRT
Trigger: AGTTCTGAGGAGCCTGGCCCAAGCAGCAAAGACACA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACTGTGTCTTTGCTGCTTaGGCCAGGCTCCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDCVFAA*ARLLRT
Trigger: AGTTCTGAGGAGCCTGGCCCAAGCAGCAAAGACACA...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAACTCTTTTCAGCTTCTaGAGATGTGTGGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPTLFSF*RCVGAC
Trigger: GCAGGCACCCACACATCTCCAGAAGCTGAAAAGAGT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCATTGGCTGGAAGCCCGTaGGTCCCTCCAAGGAGGGCA +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSLAGSP*VPPRRA
Trigger: TGCCCTCCTTGGAGGGACCCACGGGCTTCCAGCCAA...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATTGGGAGTCCTTGGCTaGAAGCCCGTGGGTCCCTCC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTLGVLG*KPVGPS
Trigger: GGAGGGACCCACGGGCTTCCAGCCAAGGACTCCCAA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGGGGGTGATGGGAACTaGGCCAGAGGTTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWGGDGN*ARGLSS
Trigger: GGAAGACAAACCTCTGGCCCAGTTCCCATCACCCCC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCTGCGCTGGGGCCATTaGAACTCCTCAGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPLRWGH*NSSVFS
Trigger: TGAGAAGACTGAGGAGTTCCAATGGCCCCAGCGCAG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGCAACCTCTTCTTTTTaGGTGGCAGCTTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPATSSF*VAASQL
Trigger: CAGCTGAGAAGCTGCCACCCAAAAAGAAGAGGTTGC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCACGAGGCTGAGCGGCTaGACCCACTCAAAGAGACAT +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPTRLSG*THSKRH
Trigger: ATGTCTCTTTGAGTGGGTCCAGCCGCTCAGCCTCGT...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGCCTCGGCTTTCCCATaGTCATCCCTCTCAAACGAG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPASAFP*SSLSNE
Trigger: CTCGTTTGAGAGGGATGACCATGGGAAAGCCGAGGC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGGGTGCCCAGGGGTTTaGGGCGCATGTCAGATGAGG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSGCPGV*GACQMR
Trigger: CCTCATCTGACATGCGCCCCAAACCCCTGGGCACCC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCATCTCTCGGGCATGTaGGTGGTGGCTGGGGACAGT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVHLSGM*VVAGDS
Trigger: ACTGTCCCCAGCCACCACCCACATGCCCGAGAGATG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGTCATGTGGGCAGAATaGGAAACGTTGGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGVMWAE*ETLGLC
Trigger: GCAGAGCCCCAACGTTTCCCATTCTGCCCACATGAC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCGTGTCTCGGTCATGTaGGCAGAATGGGAAACGTTG +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRRVSVM*AEWETL
Trigger: CAACGTTTCCCATTCTGCCCACATGACCGAGACACG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGTGTAGGGCACAGTaGGCCCCAATGGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTLCRAQ*APMGAC
Trigger: ACAGGCCCCCATTGGGGCCCACTGTGCCCTACACAG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTGGGCAACGGGGTGGTaGAACACTTGCAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGWATGW*NTCSAS
Trigger: AGAAGCACTGCAAGTGTTCCACCACCCCGTTGCCCA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACTTCTGGAGACTGTCCTaGCTCATGCTGCACGAGATG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDFWRLS*LMLHEM
Trigger: CATCTCGTGCAGCATGAGCCAGGACAGTCTCCAGAA...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGCTGGACATGGCCTaGGTGGAGAAGAATTCTGGA +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPRLDMA*VEKNSG
Trigger: TCCAGAATTCTTCTCCACCCAGGCCATGTCCAGCCT...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCACTTCCTGTTGCCAGTaGGGCCAGGCTGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGITSCCQ*GQAGFD
Trigger: ATCAAAACCAGCCTGGCCCCACTGGCAACAGGAAGT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCACTTCCTGTTGCCAGTaGGGCCAGGCTGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTTSCCQ*GQAGFD
Trigger: ATCAAAACCAGCCTGGCCCCACTGGCAACAGGAAGT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTGGGTGACCAAGATCTaGGAAAGGGTGGTGTACATT +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAWVTKI*ERVVYI
Trigger: AATGTACACCACCCTTTCCCAGATCTTGGTCACCCA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGGGGTTCCTCAAACTTaGGAAGTGCCACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPGVPQT*EVPQLL
Trigger: CAGCAACTGTGGCACTTCCCAAGTTTGAGGAACCCC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCCCCTGGTTGCCTAAGTaGGATTTCTCTGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIPWLPK*DFSGLF
Trigger: GAAGAGGCCAGAGAAATCCCACTTAGGCAACCAGGG...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGATCTGAGGACAGGCTaGACAGCATTTCTAGCTCCC +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRDLRTG*TAFLAP
Trigger: GGGAGCTAGAAATGCTGTCCAGCCTGTCCTCAGATC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACTGGTTGTGTGGAGGCTaGGGAACTGCAGTACCTTCT +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDWLCGG*GTAVPS
Trigger: AGAAGGTACTGCAGTTCCCCAGCCTCCACACAACCA...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGGGGCTTGCGGGAGCTaGATGGCACAAGCCTTCCTG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSGACGS*MAQAFL
Trigger: CAGGAAGGCTTGTGCCATCCAGCTCCCGCAAGCCCC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGCCGGGGAGCATCGCTaGGGAGATGAGTCGTTTTTG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWAGEHR*GDESFL
Trigger: CAAAAACGACTCATCTCCCCAGCGATGCTCCCCGGC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTGGTACCCTCGAGTTTaGAGAGCACATGTGCTCGAG +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRWYPRV*RAHVLE
Trigger: CTCGAGCACATGTGCTCTCCAAACTCGAGGGTACCA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCTGGTACCCTCGAGTTTaGAGAGCACATGTGCTCGAG +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIWYPRV*RAHVLE
Trigger: CTCGAGCACATGTGCTCTCCAAACTCGAGGGTACCA...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGTATCTGGGGAGGCCTaGGTCGGTGGTACCCTCGAG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTVSGEA*VGGTLE
Trigger: CTCGAGGGTACCACCGACCCAGGCCTCCCCAGATAC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATGGCCGTGGAAGTCATaGAGGGCGGAGAAGGGTCGG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTWPWKS*RAEKGR
Trigger: CCGACCCTTCTCCGCCCTCCATGACTTCCACGGCCA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGTCCGGGCCAGGATGTaGCCGTGGAAGTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTVRARM*PWKSWR
Trigger: CCTCCATGACTTCCACGGCCACATCCTGGCCCGGAC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACTGACGAGCTCTCAGTaGGACTCCAGCGGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSLTSSQ*DSSGLA
Trigger: AGCGAGGCCGCTGGAGTCCCACTGAGAGCTCGTCAG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCTCCCTCTCCTTaGGGTAGTCCCCGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGSSPSP*GSPRPP
Trigger: TGGAGGGCGGGGACTACCCCAAGGAGAGGGAGAGGA...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATTGGCCTGCCCACCTGTaGAGTGCCAGGATGGGCCCA +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDWPAHL*SARMGP
Trigger: TGGGCCCATCCTGGCACTCCACAGGTGGGCAGGCCA...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACAGAAGGGAGGTGTCTaGAGTGGGGGTGCGTGGGTG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSQKGGV*SGGAWV
Trigger: CACCCACGCACCCCCACTCCAGACACCTCCCTTCTG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGGGGAAACGGTCCTGTaGCAAAGTGGTCCTGAAACA +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRGETVL*QSGPET
Trigger: TGTTTCAGGACCACTTTGCCACAGGACCGTTTCCCC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
57% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCTCACCTCTCCCAGTTaGGGCGAACACGCTAGAGTT +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPLTSPS*GEHARV
Trigger: AACTCTAGCGTGTTCGCCCCAACTGGGAGAGGTGAG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGGAAAGGCCACGAATTaGAAGAGGCAAGTACAGCCC +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTGKATN*KRQVQP
Trigger: GGGCTGTACTTGCCTCTTCCAATTCGTGGCCTTTCC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGGAAAGGCCACGAATTaGAAGAGGCAAGTACAGCCC +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPGKATN*KRQVQP
Trigger: GGGCTGTACTTGCCTCTTCCAATTCGTGGCCTTTCC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCAGTGTGGTCCAGGCTaGGCTTGCTGCTTCTCTTGG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWQCGPG*ACCFSW
Trigger: CCAAGAGAAGCAGCAAGCCCAGCCTGGACCACACTG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCACTGTCCAGCAATATaGACAGTGTGGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRHCPAI*TVWSRL
Trigger: CAGCCTGGACCACACTGTCCATATTGCTGGACAGTG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCAAAGCCCTGGCCTCCTaGGACTTGGAGGAGTCACTT +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPKALAS*DLEESL
Trigger: AAGTGACTCCTCCAAGTCCCAGGAGGCCAGGGCTTT...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCCAGGGAGGAAACCTTaGGTGGGTAGGCTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPPGRKP*VGRLFE
Trigger: CTCAAACAGCCTACCCACCCAAGGTTTCCTCCCTGG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGACTCCTGGCCCCTGTaGCTTCTCTGCCTGAGCCTG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSDSWPL*LLCLSL
Trigger: CAGGCTCAGGCAGAGAAGCCACAGGGGCCAGGAGTC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGAGAGGAGGGCGTGCATaGGGCGAGCGTCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVRGGRA*GERLSP
Trigger: TGGAGAAAGACGCTCGCCCCATGCACGCCCTCCTCT...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGTCTGTACCGAGGAATaGCCACCCCGCGCATTTCAA +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPVCTEE*PPRAFQ
Trigger: TTGAAATGCGCGGGGTGGCCATTCCTCGGTACAGAC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCTGCTGTCGGGCTCCTaGAGGGTTGCAGGGGTTGAG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGLLSGS*RVAGVE
Trigger: CTCAACCCCTGCAACCCTCCAGGAGCCCGACAGCAG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAAAGCAGAGGGACTTCTaGGTCTGGAAGTTGGAGCTT +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPKQRDF*VWKLEL
Trigger: AAGCTCCAACTTCCAGACCCAGAAGTCCCTCTGCTT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTCCGCTGCTCTGGGCTaGGCTGCGCCGCGCTGGACT +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFSAALG*AAPRWT
Trigger: AGTCCAGCGCGGCGCAGCCCAGCCCAGAGCAGCGGA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643665.1
3UTR CAA 72 bp GGCTCGGGCCCTGCCACTTCTGCCTTTGTGGGTGGTTaGGTGGTTTTAGAACAGAGGAGGCAACAGGAGAGT +
Preference number: 4 (lower is better)
Translates to: GSGPATSAFVGG*VVLEQRRQQES
Trigger: ACTCTCCTGTTGCCTCCTCTGTTCTAAAACCACCAAACCACCCACAAAGGCAGAAGTGGCAGGGCCCGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CAA 72 bp CTGTCTAGTAGGGACCAAGCAGGGAAAGGCCACGAATaGGAAGAGGCAAGTACAGCCCCGCACAGGGAACTC +
Preference number: 4 (lower is better)
Translates to: LSSRDQAGKGHE*EEASTAPHREL
Trigger: GAGTTCCCTGTGCGGGGCTGTACTTGCCTCTTCCAATTCGTGGCCTTTCCCTGCTTGGTCCCTACTAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAAAACGCTGTTCTCTCTaGAAGCCAGCATTCATGTCC +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPKRCSL*KPAFMS
Trigger: GGACATGAATGCTGGCTTTCAGAGAGAACAGCGTTT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCATGCTATGCAAACGGTTaGAGGTTGGAGACATCTGTG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPCYANG*RLETSV
Trigger: CACAGATGTCTCCAACCTTCAACCGTTTGCATAGCA...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCCCTTCTTGGTGCCCTTaGCACTTTGTTCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIPSWCP*HFVQDP
Trigger: TGGATCCTGAACAAAGTGTCAAGGGCACCAAGAAGG...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCCTTCTTGGTGCCCTTaGCACTTTGTTCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDPSWCP*HFVQDP
Trigger: TGGATCCTGAACAAAGTGTCAAGGGCACCAAGAAGG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGAAGAAACACTGGTCTaGATGGCCTCTCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIEETLV*MASPLV
Trigger: GACCAAAGGAGAGGCCATTCAGACCAGTGTTTCTTC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGATTACTCTTGGTCTTaGAGGAGAAGCCACAGGGGC +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGDYSWS*RRSHRG
Trigger: GCCCCTGTGGCTTCTCCTTCAAGACCAAGAGTAATC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGTGGGAGGTAAACACGTaGCTGCTGTGGCTCAGGGCT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVWEVNT*LLWLRA
Trigger: AGCCCTGAGCCACAGCAGTCACGTGTTTACCTCCCA...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAAGCTGGTGTGCTGGATaGCAGAAATTTCTTTGGACG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPSWCAG*QKFLWT
Trigger: CGTCCAAAGAAATTTCTGTCATCCAGCACACCAGCT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACCTCTCAAACGAGGCTaGGCGGCTGGACCCACTCAA +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTPLKRG*AAGPTQ
Trigger: TTGAGTGGGTCCAGCCGCTCAGCCTCGTTTGAGAGG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGAAGTGCCACAGTTGCTaGGCTGCCTTGGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVKCHSC*AALGLG
Trigger: ACCCAGTCCCAAGGCAGCTCAGCAACTGTGGCACTT...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGTTCCTTCAAAGCTTCTaGGCCTGGGGCTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWFLQSF*AWGCPM
Trigger: CATGGGACAGCCCCAGGCTCAGAAGCTTTGAAGGAA...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGGTGGTGACTCGGCCTaGCCTGGAGACCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDGGDSA*PGDHLL
Trigger: CAGGAGATGGTCTCCAGGTCAGGCCGAGTCACCACC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCGGGAGGAGAGAGGATaGGCAGGGCCGGGTGAGCAG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFREERG*AGPGEQ
Trigger: CTGCTCACCCGGCCCTGCTCATCCTCTCTCCTCCCG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCCCCGGAGAAGCCACTaGCCCAGGCTGCGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEPRRSH*PRLRWA
Trigger: GGCCCACCGCAGCCTGGGTCAGTGGCTTCTCCGGGG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGCAAAGGAGAATGAGTaGACAAGGTGGTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGAKENE*TRWSGC
Trigger: GCAGCCAGACCACCTTGTTCACTCATTCTCCTTTGC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGAGAAATAGTCTCCAGTaGCTCCTGGCCCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWRNSLQ*LLAPVA
Trigger: AGCCACAGGGGCCAGGAGTCACTGGAGACTATTTCT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGGCAAGGTTTGGCTCTaGAACCTCGACCAGTTGGTT +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPGKVWL*NLDQLV
Trigger: AACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTCAGCAGCTGTTTTCTaGATCCAGAGCCAACCCATG +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRSAAVF*IQSQPM
Trigger: CATGGGTTGGCTCTGGATTCAGAAAACAGCTGCTGA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAAGATGCCACGCTGGATaGTGGGGGTGGCTCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTRCHAG*WGWLFS
Trigger: GGAGAAGAGCCACCCCCAGCATCCAGCGTGGCATCT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGATGGGGTCAACCAGTTaGCATGTGGACCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVMGSTS*HVDPSR
Trigger: CCTGGAGGGGTCCACATGGCAACTGGTTGACCCCAT...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCCCTCTTCAGAATCTGTaGTTTCTCCCTCAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIPLQNL*FLPQWA
Trigger: AGCCCACTGAGGGAGAAAGCACAGATTCTGAAGAGG...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCATTGGGGACTCCATGCTaGTGCGCCTGGACAGTGAGC +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSLGTPC*CAWTVS
Trigger: GCTCACTGTCCAGGCGCAGCAGCATGGAGTCCCCAA...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTCCAAGCCACTCGGCTaGTCGAGAGAATCAGATTTC +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRSKPLG*SRESDF
Trigger: GAAATCTGATTCTCTCGAGCAGCCGAGTGGCTTGGA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGGGCAAGTGTCTGGCTaGGCTGGGGCCATTGGAACT +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSGQVSG*AGAIGT
Trigger: AGTTCCAATGGCCCCAGCGCAGCCAGACACTTGCCC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGGGCAAGTGTCTGGCTaGGCTGGGGCCATTGGAACT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTGQVSG*AGAIGT
Trigger: AGTTCCAATGGCCCCAGCGCAGCCAGACACTTGCCC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCAGTCAAAGGATTTGCTaGGTGTCTCGGTCATGTGGG +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTSQRIC*VSRSCG
Trigger: CCCACATGACCGAGACACGCAGCAAATCCTTTGACT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGTAGCCGGATGTCACTaGTGTACTCTGTGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVVAGCH*CTLCWG
Trigger: CCCCCAGCACAGAGTACAGCAGTGACATCCGGCTAC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCCGGGCCCAACCTCATaGACATCTGCACCACATACA +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWPGPTS*TSAPHT
Trigger: TGTATGTGGTGCAGATGTGCATGAGGTTGGGCCCGG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTGGAGGCTGGGGAACTaGAGTACCTTCTTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGWRLGN*STFFES
Trigger: GGACTCAAAGAAGGTACTGCAGTTCCCCAGCCTCCA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGCATGCTGGGCTTCTTaGAGCGAATTCCACACTCCT +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGACWAS*SEFHTP
Trigger: AGGAGTGTGGAATTCGCTGCAAGAAGCCCAGCATGC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCAGGTCCGAAAACTGGTaGTCCTCCACAGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPRSENW*SSTASE
Trigger: TTCAGAGGCTGTGGAGGAGCACCAGTTTTCGGACCT...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTTGGACATGGAGCAGCTaGTGGCTGTCAGGCGCTCAG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGWTWSS*WLSGAQ
Trigger: CTGAGCGCCTGACAGCCAGCAGCTGCTCCATGTCCA...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGTCAAGTGCTGGGAGTaGAGAGGCAGGTGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVVKCWE*RGRWLK
Trigger: CTTCAGCCACCTGCCTCTGCACTCCCAGCACTTGAC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCGTGGGTGTGGGCTCTaGAGGTGCCCCGGTCCCATG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFRGCGL*RCPGPM
Trigger: CATGGGACCGGGGCACCTGCAGAGCCCACACCCACG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCGTGGGTGTGGGCTCTaGAGGTGCCCCGGTCCCATG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFRGCGL*RCPGPM
Trigger: CATGGGACCGGGGCACCTGCAGAGCCCACACCCACG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCTCGGGGTTGGTCGGTaGACGCGGGGACTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFLGVGR*TRGLQA
Trigger: CGCTTGGAGTCCCCGCGTGCACCGACCAACCCCGAG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAACTCCCAGGGAGCCCTaGCTTCTGTCTCATTTTTGT +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPTPREP*LLSHFC
Trigger: ACAAAAATGAGACAGAAGGCAGGGCTCCCTGGGAGT...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCTGTTCATTGCTAGGCTaGCCAGGGAGGAAACCTTGG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPCSLLG*PGRKPW
Trigger: CCAAGGTTTCCTCCCTGGGCAGCCTAGCAATGAACA...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGAGGGGGTTAGAGCTGTaGCCAGTGACATATACCCAG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGRGLEL*PVTYTQ
Trigger: CTGGGTATATGTCACTGGGCACAGCTCTAACCCCCT...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAACTACCCCATCCCAGTaGGGTTGCTGTACATATCTA +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPTTPSQ*GCCTYL
Trigger: TAGATATGTACAGCAACCGCACTGGGATGGGGTAGT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGTACGTCAGACTCTGTaGTTTAGACCTGCGTGGATT +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPVRQTL*FRPAWI
Trigger: AATCCACGCAGGTCTAAAGCACAGAGTCTGACGTAC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATAGGCTGCTGGGTTTGTaGCTCGAATCCTGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDRLLGL*LESCGR
Trigger: CCGCCCGCAGGATTCGAGGCACAAACCCAGCAGCCT...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCCTTCGGCCTTGGGATaGCAAACTGGTCCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWPSALG*QTGPVF
Trigger: GAACACAGGACCAGTTTGCCATCCCAAGGCCGAAGG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372583.6
ENST00000372584.5
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGGAGATCAACGGCCTTaGAGGAGAAATCACGCTCTT +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIGDQRP*RRNHAL
Trigger: AAGAGCGTGATTTCTCCTCCAAGGCCGTTGATCTCC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGTTGTATTGTTTCAGCTaGCAGTGGCAGGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWLYCFS*QWQVAP
Trigger: GGGGGCCACCTGCCACTGCCAGCTGAAACAATACAA...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCAGCTTTGGCCACATTaGTCAAGAGCTGTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWQLWPH*SRAVGA
Trigger: GGCTCCCACAGCTCTTGACCAATGTGGCCAAAGCTG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGGAGGTGTCCAGCTTTaGCCACATTGGTCAAGAGCT +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGGGVQL*PHWSRA
Trigger: AGCTCTTGACCAATGTGGCCAAAGCTGGACACCTCC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGAATGGCCTCTCCTTTaGTCAGCCGCTTCCGGGGAC +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGEWPLL*SAASGD
Trigger: GTCCCCGGAAGCGGCTGACCAAAGGAGAGGCCATTC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCGCTGGAAGAAACACTaGTCTGAATGGCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTRWKKH*SEWPLL
Trigger: AAGGAGAGGCCATTCAGACCAGTGTTTCTTCCAGCG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCTGGGTATGGGACGCTaGAAGAAACACTGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTLGMGR*KKHWSE
Trigger: TTCAGACCAGTGTTTCTTCCAGCGTCCCATACCCAG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCGGGGCTCTCTTGGGTaGCAGCTGTGCCGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFRGSLG*QLCRCL
Trigger: CAGGCAGCGGCACAGCTGCCACCCAAGAGAGCCCCG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGGAAGCTGTGAGATGTaGACGGATGCTTCGATGGGG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWGSCEM*TDASMG
Trigger: CCCCATCGAAGCATCCGTCCACATCTCACAGCTTCC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCAACCAGTTGCCATGTaGACCCCTCCAGGAGATGCT +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWQPVAM*TPPGDA
Trigger: AGCATCTCCTGGAGGGGTCCACATGGCAACTGGTTG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGAGGGTCCAGGTCTCATaGGGTCAACCAGTTGCCATG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWRVQVS*GQPVAM
Trigger: CATGGCAACTGGTTGACCCCATGAGACCTGGACCCT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGTGTGTGCCTCTTCTGTaGGCTTCAAGGAGACCTGGG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWCVPLL*ASRRPG
Trigger: CCCAGGTCTCCTTGAAGCCCACAGAAGAGGCACACA...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGGCCGGCTGCAGTACTaGCAGATGTACTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGGRLQY*QMYLPG
Trigger: GCCAGGCAAGTACATCTGCCAGTACTGCAGCCGGCC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGCTTCTGGAGCACGCTaGGCTTGGCACAGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFASGAR*AWHRAG
Trigger: GCCGGCCCTGTGCCAAGCCCAGCGTGCTCCAGAAGC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGAGCTGTATAGCCCGCTaGAGAGAAGGGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVSCIAR*REGAAW
Trigger: CCAAGCAGCCCCTTCTCTCCAGCGGGCTATACAGCT...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCATGGGCTGTGCTGGACTaGGACAGGGAACAGCGTTCG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSWAVLD*DREQRS
Trigger: CGAACGCTGTTCCCTGTCCCAGTCCAGCACAGCCCA...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGGGTCTTCGAGTGACTaGGCTGTGCTGGACTGGGAC +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGGSSSD*AVLDWD
Trigger: GTCCCAGTCCAGCACAGCCCAGTCACTCGAAGACCC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGTGTCTTCAGGTTTATaGCTCAGGGGGTGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRVSSGL*LRGCSD
Trigger: ATCTGAGCACCCCCTGAGCCATAAACCTGAAGACAC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAAAGGCACCAGGCTaGGCTTGTCTTCGGTGGACA +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWTKAPG*ACLRWT
Trigger: TGTCCACCGAAGACAAGCCCAGCCTGGTGCCTTTGT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGCTCCCGGTAGAGGCTaGATTTTGGGGACTCCATGC +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVAPGRG*ILGTPC
Trigger: GCATGGAGTCCCCAAAATCCAGCCTCTACCGGGAGC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTAATTCGATTGCCGGCTaGCGCTTCAGCATCCGGGGG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGNSIAG*RFSIRG
Trigger: CCCCCGGATGCTGAAGCGCCAGCCGGCAATCGAATT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGGGTGCCTGCAGAGATaGGCTTTGCGATCTGAAGCT +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWGCLQR*ALRSEA
Trigger: AGCTTCAGATCGCAAAGCCCATCTCTGCAGGCACCC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGAGTGTCTGGCTGCGCTaGGGCCATTGGAACTCCTCA +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVSVWLR*GHWNSS
Trigger: TGAGGAGTTCCAATGGCCCCAGCGCAGCCAGACACT...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATAGCTGGGCAAGTGTCTaGCTGCGCTGGGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDSWASV*LRWGHW
Trigger: CCAATGGCCCCAGCGCAGCCAGACACTTGCCCAGCT...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATTCTCAGCTGGGAGCTaGGCAAGTGTCTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTFSAGS*ASVWLR
Trigger: GCGCAGCCAGACACTTGCCCAGCTCCCAGCTGAGAA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGGGACAGTCAACATGTaGGTGCCCAGGGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSGTVNM*VPRGLG
Trigger: CCCCAAACCCCTGGGCACCCACATGTTGACTGTCCC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCATCTCGGGCATGTGGGTaGTGGCTGGGGACAGTCAAC +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSSRACG*WLGTVN
Trigger: GTTGACTGTCCCCAGCCACCACCCACATGCCCGAGA...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACTGGCAGAGGGTTTACTaGATGAGGGCTGTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDWQRVY*MRAVVL
Trigger: AAGAACCACAGCCCTCATCCAGTAAACCCTCTGCCA...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGTCTGGGCAACGGGGTaGTGGAACACTTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVVWATG*WNTCSA
Trigger: AGCACTGCAAGTGTTCCACCACCCCGTTGCCCAGAC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACTGCTGCACGAGATGCTaGAAGGAGAAAAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDCCTRC*KEKRET
Trigger: AGTCTCCCTTTTCTCCTTCCAGCATCTCGTGCAGCA...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGTGCAGAACAGTAGGCTaGAGAGGAAGCGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVCRTVG*RGSGGA
Trigger: AGCCCCACCGCTTCCTCTCCAGCCTACTGTTCTGCA...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCAGGCTGGTTTTGATCTaGGGCAGATGGCTTTCCACA +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTRLVLI*GRWLST
Trigger: TGTGGAAAGCCATCTGCCCCAGATCAAAACCAGCCT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGAGGCTGGTTTTGATCTaGGGCAGATGGCTTTCCACA +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRRLVLI*GRWLST
Trigger: TGTGGAAAGCCATCTGCCCCAGATCAAAACCAGCCT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGGACACCATGGTGTCTaGACAGGCAGGCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDGHHGV*TGRQGQ
Trigger: CTGGCCCTGCCTGCCTGTCCAGACACCATGGTGTCC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCATAGGACGGCATATTaGTCTGAACACGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRHRTAY*SEHGQA
Trigger: TGCCTGTCCGTGTTCAGACCAATATGCCGTCCTATG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGAGCTGCCTTGGGACTaGGTGACCAAGATCTGGGAA +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWELPWD*VTKIWE
Trigger: TTCCCAGATCTTGGTCACCCAGTCCCAAGGCAGCTC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGGGGTTCCTCAAACTTaGGAAGTGCCACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGGVPQT*EVPQLL
Trigger: CAGCAACTGTGGCACTTCCCAAGTTTGAGGAACCCC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
56% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCAGGCACTCTCAGGTATaGAGTTGGGAAAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIRHSQV*SWESSA
Trigger: AGCAGAGCTTTCCCAACTCCATACCTGAGAGTGCCT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAAGCTCCCTCCTGCCTTaGCCCTGGTTGCCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTSSLLP*PWLPKW
Trigger: CCACTTAGGCAACCAGGGCCAAGGCAGGAGGGAGCT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGTGAGGTTTGCCAGATaGCTGGGGATATTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPVRFAR*LGIFLQ
Trigger: TTGAAGGAATATCCCCAGCCATCTGGCAAACCTCAC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGATCAGGTTGTTCCTTaGAATCTTCTTTCTTCACGC +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRADQVVP*NLLSSR
Trigger: GCGTGAAGAAAGAAGATTCCAAGGAACAACCTGATC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCACATTAGTGGTTGTGTaGAGGCTGGGGAACTGCAGT +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGITLVVV*RLGNCS
Trigger: ACTGCAGTTCCCCAGCCTCCACACAACCACTAATGT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAAAACCCCCGGAAGGTTaGGGTTGTACAAACTTATGC +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPKPPEG*GCTNLC
Trigger: GCATAAGTTTGTACAACCCCAACCTTCCGGGGGTTT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCTTGCGGGAGCTGGATaGCACAAGCCTTCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGLAGAG*HKPSCL
Trigger: GAGGCAGGAAGGCTTGTGCCATCCAGCTCCCGCAAG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCTAGCTAGATCTTTCTaGCCTTCCGGGGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDLARSF*PSGETS
Trigger: ACTGGTTTCCCCGGAAGGCCAGAAAGATCTAGCTAG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTGGCACTTTTTGCTGTaGGCCTTCGACTTCATGTGC +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRWHFLL*AFDFMC
Trigger: GCACATGAAGTCGAAGGCCCACAGCAAAAAGTGCCA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGCCTGCTTCTTTGCTTaGGGACCACGGTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWACFFA*GPRSSW
Trigger: CCAAGAAGACCGTGGTCCCCAAGCAAAGAAGCAGGC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGCCGGGGAGCATCGCTaGGGAGATGAGTCGTTTTTG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVAGEHR*GDESFL
Trigger: CAAAAACGACTCATCTCCCCAGCGATGCTCCCCGGC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGAGACCATCTCCTGGTaGGCGAGTATCTGGGGAGGC +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSETISW*ASIWGG
Trigger: GCCTCCCCAGATACTCGCCCACCAGGAGATGGTCTC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGGAGGCGCAGGTCTCTaGGCTTCTGCTGAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSGGAGL*ASAEEL
Trigger: AAGCTCCTCAGCAGAAGCCCAGAGACCTGCGCCTCC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGCCAGGATGTGGCCGTaGAAGTCATGGAGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDARMWP*KSWRAE
Trigger: CTCCGCCCTCCATGACTTCCACGGCCACATCCTGGC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGTGCCCCGGTCCCATaGGGTGTCCAGTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGAPVP*GVQSGG
Trigger: GCCTCCTGACTGGACACCCCATGGGACCGGGGCACC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGTCCTCAGGCTGATGTaGATGTGCCCTGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDVLRLM*MCPGLP
Trigger: GGGGAGCCCAGGGCACATCCACATCAGCCTGAGGAC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTTCGAGGAAAGTGGCTaGAAACGTCTGTTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRFEESG*KRLLLD
Trigger: GTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCATGATTCGAGGAAAGTaGCTGGAAACGTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAMIRGK*LETSVA
Trigger: AGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGATGGGGCTGAGGAAGTaGGATGATTCGAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRMGLRK*DDSRKV
Trigger: CACTTTCCTCGAATCATCCCACTTCCTCAGCCCCAT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATTGTGCCCCTCTGCCTaGGGACACTGGCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTLCPSA*GHWPFC
Trigger: GCAGAAAGGCCAGTGTCCCCAGGCAGAGGGGCACAA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATTCTGCCTTTGTGGGTaGTTTGGTGGTTTTAGAACA +
Preference number: 4 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAFCLCG*FGGFRT
Trigger: TGTTCTAAAACCACCAAACCACCCACAAAGGCAGAA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTGGCCTCCTGGGACTTaGAGGAGTCACTTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGWPPGT*RSHFLS
Trigger: TGACAGAAAGTGACTCCTCCAAGTCCCAGGAGGCCA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGGAGGAAACCTTGGGTaGGTAGGCTGTTTGAGTACA +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPGGNLG*VGCLST
Trigger: TGTACTCAAACAGCCTACCCACCCAAGGTTTCCTCC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGGCACGGCATCAATGTaGAGGCAGCCCTTTGGTGAG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVGTASM*RQPFGE
Trigger: CTCACCAAAGGGCTGCCTCCACATTGATGCCGTGCC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTTGGTTCTGTCCCTCTaGGCACGGCATCAATGTGGA +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGLVLSL*ARHQCG
Trigger: TCCACATTGATGCCGTGCCCAGAGGGACAGAACCAA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGACATATACCCAGGCTaGTGGCATTGGTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPDIYPG*WHWFCP
Trigger: GGGACAGAACCAATGCCACCAGCCTGGGTATATGTC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTAGAGGAGGGCGTGCATaGGGCGAGCGTCTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGRGGRA*GERLSP
Trigger: TGGAGAAAGACGCTCGCCCCATGCACGCCCTCCTCT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGAGATTTCTAGAGCTTaGAGAACTGTGTTGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAEISRA*RTVLEG
Trigger: TCCCTCCAACACAGTTCTCCAAGCTCTAGAAATCTC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372583.6
3UTR CAA 72 bp AGCAATGCCCTTTATGCAGCTCCCAGACCTCAGCCCTaGAAGTCTCCAATCCGTGGGCAGTCCCATGGGTTA +
Preference number: 4 (lower is better)
Translates to: SNALYAAPRPQP*KSPIRGQSHGL
Trigger: TAACCCATGGGACTGCCCACGGATTGGAGACTTCAAGGGCTGAGGTCTGGGAGCTGCATAAAGGGCATTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGTCGGGAAAACGTCATaGAGGATGTCAGTATTGCCA +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRVGKTS*RMSVLP
Trigger: TGGCAATACTGACATCCTTCATGACGTTTTCCCGAC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGTCGGGAAAACGTCATaGAGGATGTCAGTATTGCCA +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPVGKTS*RMSVLP
Trigger: TGGCAATACTGACATCCTTCATGACGTTTTCCCGAC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGTCGGGAAAACGTCATaGAGGATGTCAGTATTGCCA +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIVGKTS*RMSVLP
Trigger: TGGCAATACTGACATCCTTCATGACGTTTTCCCGAC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGACGCTATTCTATTGGTaGGGCATGGCCCTCTACTTT +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRTLFYW*GMALYF
Trigger: AAAGTAGAGGGCCATGCCTCACCAATAGAATAGCGT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGGCGGGCTGCATTTATaGATAATCCCAGTGTCCCAA +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGGGLHL*IIPVSQ
Trigger: TTGGGACACTGGGATTATTCATAAATGCAGCCCGCC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGTGCTGCGGAAGCTGTaGGATGTGGACGGATGCTTC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTVLRKL*DVDGCF
Trigger: GAAGCATCCGTCCACATCTCACAGCTTCCGCAGCAC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCACACTTGCCAAAGATaGTCTCAGCGTAGGACTTGG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPHTCQR*SQRRTW
Trigger: CCAAGTCCTACGCTGAGATCATCTTTGGCAAGTGTG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGGCTCATGCTCAATCTaGCTCTTTTCAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRGSCSI*LFSASG
Trigger: TCCAGAAGCTGAAAAGAGTCAGATTGAGCATGAGCC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGGCTCATGCTCAATCTaGCTCTTTTCAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPGSCSI*LFSASG
Trigger: TCCAGAAGCTGAAAAGAGTCAGATTGAGCATGAGCC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGAAGGCTGCCAGCTGGTaGAAGGACACGTTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVKAASW*KDTFAS
Trigger: GGAAGCAAACGTGTCCTTTCACCAGCTGGCAGCCTT...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCATGAGCAGGGCCGGGTaGGCAGGAGGGACTTCGGGA +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFMSRAG*AGGTSG
Trigger: TCCCGAAGTCCCTCCTGCTCACCCGGCCCTGCTCAT...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACCCGCCCTCCAGCTCTaGGGAGAGTGTGAATTTGGA +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSPALQL*GECEFG
Trigger: TCCAAATTCACACTCTCCTCAGAGCTGGAGGGCGGG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACCCGCCCTCCAGCTCTaGGGAGAGTGTGAATTTGGA +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTPALQL*GECEFG
Trigger: TCCAAATTCACACTCTCCTCAGAGCTGGAGGGCGGG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATCCAGACCTCAGCCCTTaGAGTCTCCAATCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDPDLSP*SLQSVG
Trigger: GCCCACGGATTGGAGACTTCAAGGGCTGAGGTCTGG...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGAAAATATCCTCAGGCTaGACACTCAGCCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRKISSG*TLSQSC
Trigger: ACAGCTCTGGCTGAGTGTTCAGCCTGAGGATATTTT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGTCCCCCGTGTGCTATaGAAACGGTTGAAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWVPRVL*KRLKVG
Trigger: TCCAACCTTCAACCGTTTGCATAGCACACGGGGGAC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGTGTGTGAGCGAATGTaGTTCTGGAGCACGCTGGGC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTVCERM*FWSTLG
Trigger: GCCCAGCGTGCTCCAGAAGCACATTCGCTCACACAC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGCCTCTTCAGAATCTGTaGTTTCTCCCTCAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGPLQNL*FLPQWA
Trigger: AGCCCACTGAGGGAGAAAGCACAGATTCTGAAGAGG...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGTTATGGCTCAGGGGGTaGTCAGATGAGGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWLWLRG*SDEGST
Trigger: TGTGGAACCCTCATCTGAGCACCCCCTGAGCCATAA...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCACTCAAAGAGACATTaGTTTCCTGGCTCGGGCTGC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWHSKRH*FPGSGC
Trigger: GCAGCCCGAGCCAGGAAAGCAATGTCTCTTTGAGTG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATCAGTCAACATGTGGGTaGCCAGGGGTTTGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDQSTCG*PGVWGA
Trigger: TGCGCCCCAAACCCCTGGGCACCCACATGTTGACTG...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGTGGAACACTTGCAGTaGTTCTGTGTAGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGVEHLQ*FCVGHS
Trigger: ACTGTGCCCTACACAGAAGCACTGCAAGTGTTCCAC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGTGGAACACTTGCAGTaGTTCTGTGTAGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPVEHLQ*FCVGHS
Trigger: ACTGTGCCCTACACAGAAGCACTGCAAGTGTTCCAC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGAGGTATGGCTTCTCATaGAGGGGTGTCTGGGCAACG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVRYGFS*RGVWAT
Trigger: CGTTGCCCAGACACCCCTGCATGAGAAGCCATACCT...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAAGGAAGGAAGGGGGCTaGCTGAAGGGGATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSRKEGG*LKGMLA
Trigger: AGCCAACATCCCCTTCAGGCAGCCCCCTTCCTTCCT...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTAGGAAGGAAGGGGGCTaGCTGAAGGGGATGTTGGCT +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGRKEGG*LKGMLA
Trigger: AGCCAACATCCCCTTCAGGCAGCCCCCTTCCTTCCT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGAAGGGTGGTGTACATTaGGCTCCCATAGGACGGCAT +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWKGGVH*APIGRH
Trigger: ATGCCGTCCTATGGGAGCGCAATGTACACCACCCTT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGTGAAAGGACACGTTTaGTTCCCCCTGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGVKGHV*FPLLLM
Trigger: CATCAACAGCAGGGGGAAGCAAACGTGTCCTTTCAC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGAGGACCTCCTATCTaGATGCTGGATGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPRGPPI*MLDVIW
Trigger: CCAAATCACATCCAGCATGCAGATAGGAGGTCCTCT...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTCTCTTGGCACTTTTTaGTGTGGGCCTTCGACTTCA +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRSLGTF*CGPSTS
Trigger: TGAAGTCGAAGGCCCACAGCAAAAAGTGCCAAGAGA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTCTCTTGGCACTTTTTaGTGTGGGCCTTCGACTTCA +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTSLGTF*CGPSTS
Trigger: TGAAGTCGAAGGCCCACAGCAAAAAGTGCCAAGAGA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACTTCCCCGCAAACCTCTaGTGTGGAGAACTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDFPANL*CGELEK
Trigger: TTTTTCCAGTTCTCCACAGCAGAGGTTTGCGGGGAA...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGAAGCAATGCCCTTTATaGAGCTCCCAGACCTCAGCC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWKQCPL*SSQTSA
Trigger: GGCTGAGGTCTGGGAGCTGCATAAAGGGCATTGCTT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGTGTTCATTGCTAGGCTaGCCAGGGAGGAAACCTTGG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWCSLLG*PGRKPW
Trigger: CCAAGGTTTCCTCCCTGGGCAGCCTAGCAATGAACA...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGCCGGGCCTCTGCCCTaGCGGCTGCACTGTTCATTG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFAGPLP*RLHCSL
Trigger: CAATGAACAGTGCAGCCGGCAGGGCAGAGGCCCGGC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGCCCAGAGGAGGGCGTaGATGGGGCGAGCGTCTTTC +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFAQRRA*MGRASF
Trigger: GAAAGACGCTCGCCCCATGCACGCCCTCCTCTGGGC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCACTGCCTCCTCTGCTaGTTCCCTCAACAGGCACAA +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVHCLLC*FPQQAQ
Trigger: TTGTGCCTGTTGAGGGAAGCAGCAGAGGAGGCAGTG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTAGCCACTGCCTCCTCTaGTGCTTCCCTCAACAGGCA +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGSHCLL*CFPQQA
Trigger: TGCCTGTTGAGGGAAGCAGCAGAGGAGGCAGTGGCT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCACTACCCCATCCCAGTaGGGTTGCTGTACATATCTA +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGITTPSQ*GCCTYL
Trigger: TAGATATGTACAGCAACCGCACTGGGATGGGGTAGT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAACTACCCCATCCCAGTaGGGTTGCTGTACATATCTA +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPTTPSQ*GCCTYL
Trigger: TAGATATGTACAGCAACCGCACTGGGATGGGGTAGT...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGACCAAACTAGGCAGCTaGATAATGGGAGAGTCGGCT +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGTKLGS*IMGESA
Trigger: AGCCGACTCTCCCATTATCCAGCTGCCTAGTTTGGT...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372583.6
ENST00000372584.5
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGAGGGGCGGGCTTGCTTaGCCAGGACCCCGCGAGGCT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAERGGLA*PGPREA
Trigger: AGCCTCGCGGGGTCCTGGCCAAGCAAGCCCGCCCCT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCCTTTAGTTCTGGGTTaGAGATCAACGGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPPLVLG*RSTALE
Trigger: CTCCAAGGCCGTTGATCTCCAACCCAGAACTAAAGG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTTGGCCCAGTCATCCCTaGTCCTGGCACAAGAGATGC +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGWPSHP*SWHKRC
Trigger: GCATCTCTTGTGCCAGGACCAGGGATGACTGGGCCA...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTCTATTGGTGAGGCATaGCCCTCTACTTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRSIGEA*PSTLQT
Trigger: TGTCTGCAAAGTAGAGGGCCATGCCTCACCAATAGA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGATTGGTCAAGAGCTGTaGGAGCCAAACCCAAGACGG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWIGQEL*EPNPRR
Trigger: CCGTCTTGGGTTTGGCTCCCACAGCTCTTGACCAAT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTAGGCGACATGAATGCTaGTGTCAGAGGGTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGRRHEC*CQRVLR
Trigger: CCGCAGCACCCTCTGACACCAGCATTCATGTCGCCT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAAGGCGACATGAATGCTaGTGTCAGAGGGTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTRRHEC*CQRVLR
Trigger: CCGCAGCACCCTCTGACACCAGCATTCATGTCGCCT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAAGGCGACATGAATGCTaGTGTCAGAGGGTGCTGCGG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSRRHEC*CQRVLR
Trigger: CCGCAGCACCCTCTGACACCAGCATTCATGTCGCCT...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGGCCGGCTGCAGTACTaGCAGATGTACTTGCCTGGC +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDGRLQY*QMYLPG
Trigger: GCCAGGCAAGTACATCTGCCAGTACTGCAGCCGGCC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGAGCGAATGTGCTTCTaGAGCACGCTGGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTERMCF*STLGLA
Trigger: TGCCAAGCCCAGCGTGCTCCAGAAGCACATTCGCTC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGTCGTGGCTGGAACTGTaGCTCCCAGAGCTGTATAGC +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVSWLEL*LPELYS
Trigger: GCTATACAGCTCTGGGAGCCACAGTTCCAGCCACGA...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTAACAGCGTTCGTGGCTaGAACTGTGGCTCCCAGAGC +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGNSVRG*NCGSQS
Trigger: GCTCTGGGAGCCACAGTTCCAGCCACGAACGCTGTT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGTACTGGGCGGGTGCTaGAGGCTCAGCAGTGATTGT +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGVLGGC*RLSSDC
Trigger: ACAATCACTGCTGAGCCTCCAGCACCCGCCCAGTAC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGACTCTTTTCAGCTTCTaGAGATGTGTGGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGTLFSF*RCVGAC
Trigger: GCAGGCACCCACACATCTCCAGAAGCTGAAAAGAGT...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGGGGGTGATGGGAACTaGGCCAGAGGTTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGGGDGN*ARGLSS
Trigger: GGAAGACAAACCTCTGGCCCAGTTCCCATCACCCCC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCAGAGGACTCGAAGCTaGACTCCCCTGATGATTGGG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVQRTRS*TPLMIG
Trigger: CCCAATCATCAGGGGAGTCCAGCTTCGAGTCCTCTG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCATGTCAGATGAGGGACTaGGGGCCTCGGCTTTCCCAT +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSCQMRD*GPRLSH
Trigger: ATGGGAAAGCCGAGGCCCCCAGTCCCTCATCTGACA...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACATGTGGGTGGTGGCTaGGGACAGTCAACATGTGGG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSHVGGG*GQSTCG
Trigger: CCCACATGTTGACTGTCCCCAGCCACCACCCACATG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATCATCTCTCGGGCATGTaGGTGGTGGCTGGGGACAGT +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDHLSGM*VVAGDS
Trigger: ACTGTCCCCAGCCACCACCCACATGCCCGAGAGATG...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGTCCACCATGTGAGGTaGCCGCAGAGGAAATCTGGG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSVHHVR*PQRKSG
Trigger: CCCAGATTTCCTCTGCGGCCACCTCACATGGTGGAC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGTCTGGGCAACGGGGTaGTGGAACACTTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTVWATG*WNTCSA
Trigger: AGCACTGCAAGTGTTCCACCACCCCGTTGCCCAGAC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGGAGAAAAGGGAGACTaGTGGGGGCAGGTATGGCTT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVGEKGD*WGQVWL
Trigger: AAGCCATACCTGCCCCCACCAGTCTCCCTTTTCTCC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTGCTGCACGAGATGCTaGAAGGAGAAAAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGCCTRC*KEKRET
Trigger: AGTCTCCCTTTTCTCCTTCCAGCATCTCGTGCAGCA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAATGAGCTGGGGGAGATaGAGTTGGCCTGGGTGCAGA +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSMSWGR*SWPGCR
Trigger: TCTGCACCCAGGCCAACTCCATCTCCCCCAGCTCAT...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGCATAGGACGGCATATTaGTCTGAACACGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGHRTAY*SEHGQA
Trigger: TGCCTGTCCGTGTTCAGACCAATATGCCGTCCTATG...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCTCTCAGGTATGGAGTTaGGAAAGCTCTGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGISQVWS*ESSALL
Trigger: GAGCAAAGCAGAGCTTTCCCAACTCCATACCTGAGA...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGGTTTGCCAGATGGCTaGGGATATTCCTTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDGLPDG*GYSFKA
Trigger: AGCTTTGAAGGAATATCCCCAGCCATCTGGCAAACC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGATCAGGTTGTTCCTTaGAATCTTCTTTCTTCACGC +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAADQVVP*NLLSSR
Trigger: GCGTGAAGAAAGAAGATTCCAAGGAACAACCTGATC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTACCTTCTTGTGACTTaGCTGGTCTGGAGGACGTTT +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTYLLVT*LVWRTF
Trigger: AAACGTCCTCCAGACCAGCCAAGTCACAAGAAGGTA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACAAACCCCCGGAAGGTTaGGGTTGTACAAACTTATGC +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDKPPEG*GCTNLC
Trigger: GCATAAGTTTGTACAACCCCAACCTTCCGGGGGTTT...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGTTTCTTCAGCATGCTaGGCTTCTTGCAGCGAATTC +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTVSSAC*ASCSEF
Trigger: GAATTCGCTGCAAGAAGCCCAGCATGCTGAAGAAAC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGAGATGAGTCGTTTTTaGTTAGCGAGTGTTTGCGGG +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTEMSRF*LASVCG
Trigger: CCCGCAAACACTCGCTAACCAAAAACGACTCATCTC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCTGGTGGGCGAGTATCTaGGGAGGCCTGGGTCGGTGG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFWWASI*GGLGRW
Trigger: CCACCGACCCAGGCCTCCCCAGATACTCGCCCACCA...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCTGGAGACCATCTCCTaGTGGGCGAGTATCTGGGGA +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGLETIS*WASIWG
Trigger: TCCCCAGATACTCGCCCACCAGGAGATGGTCTCCAG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGGAGGCGCAGGTCTCTaGGCTTCTGCTGAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDGGAGL*ASAEEL
Trigger: AAGCTCCTCAGCAGAAGCCCAGAGACCTGCGCCTCC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGAGTGCAGAGGCAGGTaGCTGAAGATGTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWECRGR*LKMFSS
Trigger: AGAGGAGAACATCTTCAGCCACCTGCCTCTGCACTC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCTTCGAGGAAAGTGGCTaGAAACGTCTGTTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPFEESG*KRLLLD
Trigger: GTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAA...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGTGTGGAGTGCCAGGATaGGCCCATGACTCAGACTAC +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVCGVPG*AHDSDY
Trigger: GTAGTCTGAGTCATGGGCCCATCCTGGCACTCCACA...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCCTCGGTCAGGGGCTTaGGAGCCAGGGACGGACAGT +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFPRSGA*EPGTDS
Trigger: ACTGTCCGTCCCTGGCTCCCAAGCCCCTGACCGAGG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCACCAGCCACAGTTGTaGGTATTTCCTTGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPHQPQL*VFPWGS
Trigger: ACTACCCCAAGGAAATACCCACAACTGTGGCTGGTG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGGTCAAAAGAATCTGTaGTGGCTGGGTGAAGTATCA +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPGQKNL*WLGEVS
Trigger: TGATACTTCACCCAGCCACCACAGATTCTTTTGACC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCTCACCTCTCCCAGTTaGGGCGAACACGCTAGAGTT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVLTSPS*GEHARV
Trigger: AACTCTAGCGTGTTCGCCCCAACTGGGAGAGGTGAG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCTGCTCTGTATAGGGTaGCATCAAACCCAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPLLCIG*HQTQPS
Trigger: TGAAGGCTGGGTTTGATGCCACCCTATACAGAGCAG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGATAGCTCAAGAGCCCTaGGGCAGGCACTTGATTCAC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWIAQEP*GRHLIH
Trigger: GTGAATCAAGTGCCTGCCCCAGGGCTCTTGAGCTAT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGGTCTGGCTGCAGGCTaGACTGTGGCTGGTTTGTCT +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSGLAAG*TVAGLS
Trigger: AGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGATATACCCAGGCTGGTaGCATTGGTTCTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGIYPGW*HWFCPS
Trigger: AGAGGGACAGAACCAATGCCACCAGCCTGGGTATAT...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGGTGTACCTGTGGGCTaGGGGCTCTGTGCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFGVPVG*GLCAQR
Trigger: CCTCTGCGCACAGAGCCCCCAGCCCACAGGTACACC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCAGAAGCAGAATTGGTaGAACAGGCTTTCGGGAACT +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTQKQNW*NRLSGT
Trigger: AGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACACACAGAAGCAGAATTaGTGGAACAGGCTTTCGGGA +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDTQKQN*WNRLSG
Trigger: TCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGT...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGCCAAAAACCAGCCGTaGTCTCATGGTCAAGATGTG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGAKNQP*SHGQDV
Trigger: CACATCTTGACCATGAGACCACGGCTGGTTTTTGGC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS-3UTR TCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACAATAGCCATGTACATTaGAGCACCAAACTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDNSHVH*STKLGS
Trigger: GCTGCCTAGTTTGGTGCTTCAATGTACATGGCTATT...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372583.6
ENST00000372584.5
CDS-3UTR TCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCCAGCCCCTTCTTCATaGATTATTCCGGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGPAPSS*IIPARQ
Trigger: CTGCCTGGCCGGAATAATTCATGAAGAAGGGGCTGG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372583.6
ENST00000372584.5
CDS-3UTR TCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGAGGCACCACTTCCGATaGCCAAAACTGAAACGCTGT +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWRHHFR*PKLKRC
Trigger: ACAGCGTTTCAGTTTTGGTCATCGGAAGTGGTGCCT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCCAGCACTTTCTGCCTaGATGTCTGTCGGGAAAACG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVPALSA*MSVGKT
Trigger: CGTTTTCCCGACAGACATTCAGGCAGAAAGTGCTGG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGTTTGCCAGGCGACATaGATGCTGGTGTCAGAGGGT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTVCQAT*MLVSEG
Trigger: ACCCTCTGACACCAGCATTCATGTCGCCTGGCAAAC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCTCGCCACCCATGCCTaGGGCCAGGCCTGCTTTGAT +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFLATHA*GQACFD
Trigger: ATCAAAGCAGGCCTGGCCTCAGGCATGGGTGGCGAG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCATCTTCCTCAGTGGAGTaGGTTCCAGGGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSSSSVE*VPGWFP
Trigger: TGGGAACCACCCTGGAACTCACTCCACTGAGGAAGA...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGGAAGCGGTGGGGCTTaGAATAAGGAGGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSGSGGA*NKEGGS
Trigger: ACTTCCTCCCTCCTTATTTCAAGCCCCACCGCTTCC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAAAGGCTGCCAGCTGGTaGAAGGACACGTTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSKAASW*KDTFAS
Trigger: GGAAGCAAACGTGTCCTTTCACCAGCTGGCAGCCTT...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGTGTGTCAGATGGATCTaGGGACAGGCTGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVCVRWI*GQAGQH
Trigger: ATGCTGTCCAGCCTGTCCTCAGATCCATCTGACACA...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGTCCGTACCTTCTTGTaGCTTGGCTGGTCTGGAGGA +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGVRTFL*LGWSGG
Trigger: TCCTCCAGACCAGCCAAGTCACAAGAAGGTACGGAC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATTCCGGGGAAACCAGTaGAGGGAGGTGAACCTCTGT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTFRGNQ*REVNLC
Trigger: ACAGAGGTTCACCTCCCTTCACTGGTTTCCCCGGAA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTACATACTCTTCGTTTaGTTTGTACCCTCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAYILFV*FVPSFE
Trigger: TTCGAAGGAGGGTACAAATCAAACGAAGAGTATGTA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGAGGCAGCCCTTTGGTaGGATTCTATTTGTGCATTT +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPREAALW*DSICAF
Trigger: AAATGCACAAATAGAATCTCACCAAAGGGCTGCCTC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGAGGCAGCCCTTTGGTaGGATTCTATTTGTGCATTT +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTEAALW*DSICAF
Trigger: AAATGCACAAATAGAATCTCACCAAAGGGCTGCCTC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGGGTTGAGCCCAGAGTaGGAGCCACAGGTGCGGGCG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEGLSPE*EPQVRA
Trigger: CGCCCGCACCTGTGGCTCTCACTCTGGGCTCAACCC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGATGTCCATCCAGGCATaGATGCGTGTTTGTATACAC +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRMSIQA*MRVCIH
Trigger: GTGTATACAAACACGCATGCATGCCTGGATGGACAT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372583.6
ENST00000372584.5
CDS-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTAGGCTGCTGGGTTTGTaGCTCGAATCCTTCGGCCTT +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGRLLGL*LESFGL
Trigger: AAGGCCGAAGGATTCGAGGCACAAACCCAGCAGCCT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372584.5
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCATGGCCCTCTACTTTaGAGACAGAAAACGCACCAG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWHGPLL*RQKTHQ
Trigger: CTGGTGCGTTTTCTGTCTGCAAAGTAGAGGGCCATG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCACAAAGACTTCAGATaGTATTCAGGGAGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDHKDFR*YSGRVR
Trigger: CCTGACTCTCCCTGAATAGCATCTGAAGTCTTTGTG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGCTGACCTGCTGCTCTaGACTCTCGGAGCGAGAGAA +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDADLLL*TLGARE
Trigger: TTCTCTCGCTCCGAGAGTGCAGAGCAGCAGGTCAGC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGGACTCCATGCTGCTaGGCCTGGACAGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGTPCC*AWTVSS
Trigger: GGAGCTCACTGTCCAGGCGCAGCAGCATGGAGTCCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAATTTTGGGGACTCCATaGTGCTGCGCCTGGACAGTG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTILGTP*CCAWTV
Trigger: CACTGTCCAGGCGCAGCAGCATGGAGTCCCCAAAAT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTATTTTGGGGACTCCATaGTGCTGCGCCTGGACAGTG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGILGTP*CCAWTV
Trigger: CACTGTCCAGGCGCAGCAGCATGGAGTCCCCAAAAT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACAGATGGCCCGGGGCTaGCAAACTGACTTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSQMARG*QTDFLW
Trigger: CCACAAAAAGTCAGTTTGGCAGCCCCGGGCCATCTG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCAGATGGCCCGGGGCTaGCAAACTGACTTTTTGTGG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGQMARG*QTDFLW
Trigger: CCACAAAAAGTCAGTTTGGCAGCCCCGGGCCATCTG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCATAGTCAAAGGATTTaGTGCGTGTCTCGGTCATGT +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRHSQRI*CVSRSC
Trigger: ACATGACCGAGACACGCAGCAAATCCTTTGACTATG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATGGAGTTGGCCTGGGTaGAGAACAGTAGGCTGGAGA +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTWSWPG*RTVGWR
Trigger: TCTCCAGCCTACTGTTCTGCACCCAGGCCAACTCCA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCCGGGCCCAACCTCATaGACATCTGCACCACATACA +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGPGPTS*TSAPHT
Trigger: TGTATGTGGTGCAGATGTGCATGAGGTTGGGCCCGG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATTGGCACAAGCCTTCCTaGCTCAGGATGCGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDWHKPS*LRMRSC
Trigger: ACAGCTCCGCATCCTGAGGCAGGAAGGCTTGTGCCA...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGGTGAACCTCTGTCATaGGGGGCTTGCGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFGEPLS*GACGSW
Trigger: CCAGCTCCCGCAAGCCCCGCATGACAGAGGTTCACC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGCCTTCGACTTCATGTaGTTAGTCAGATTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDAFDFM*LVRFPL
Trigger: CAAAGGGAATCTGACTAAGCACATGAAGTCGAAGGC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGCCTTCGACTTCATGTaGTTAGTCAGATTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRAFDFM*LVRFPL
Trigger: CAAAGGGAATCTGACTAAGCACATGAAGTCGAAGGC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATTGGTGGACGGCTGCCTaGTTCTTTGCTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDWWTAA*FFAWGP
Trigger: TGGTCCCCAAGCAAAGAAGCAGGCAGCCGTCCACCA...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGTCAAGTGCTGGGAGTaGAGAGGCAGGTGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDVKCWE*RGRWLK
Trigger: CTTCAGCCACCTGCCTCTGCACTCCCAGCACTTGAC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCTCGGGGTTGGTCGGTaGACGCGGGGACTCCAAGCG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAELGVGR*TRGLQA
Trigger: CGCTTGGAGTCCCCGCGTGCACCGACCAACCCCGAG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCTCCTCCTTCTACCTaGACCTATTATTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPPPPST*TYYFVL
Trigger: CAACACAAAATAATAGGTGCAGGTAGAAGGAGGAGG...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCCTGGCTCACACTGATTaGTTTGGAGAATTCCAACGA +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGILAHTD*FGEFQR
Trigger: TCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAG...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACCTGGGCTGAAGCAATaGCCTTTATGCAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTPGLKQ*PLCSSQ
Trigger: CTGGGAGCTGCATAAAGGGCATTGCTTCAGCCCAGG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACCTGGGCTGAAGCAATaGCCTTTATGCAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSPGLKQ*PLCSSQ
Trigger: CTGGGAGCTGCATAAAGGGCATTGCTTCAGCCCAGG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGGGGCAGGAAGAGCTTaGCCAGGCAGATTTCTAACC +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSGAGRA*PGRFLT
Trigger: GGTTAGAAATCTGCCTGGGCAAGCTCTTCCTGCCCC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGTCCCCAAGGACAGGTaGTCAGCCAGGACTTTTGCT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTVPKDR*SARTFA
Trigger: AGCAAAAGTCCTGGCTGAGCACCTGTCCTTGGGGAC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACCTTCGGCCTTGGGATaGCAAACTGGTCCTGTGTTC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTPSALG*QTGPVF
Trigger: GAACACAGGACCAGTTTGCCATCCCAAGGCCGAAGG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372583.6
ENST00000372584.5
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACGAATCCTTCGGCCTTaGGATGGCAAACTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSRILRP*DGKLVL
Trigger: CAGGACCAGTTTGCCATCCCAAGGCCGAAGGATTCG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372584.5
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGCTGGATGCTGGGGGTaGCTCTTCTCCCCTTTAGTT +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGAGCWG*LFSPLV
Trigger: AACTAAAGGGGAGAAGAGCCACCCCCAGCATCCAGC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTGCCACGCTGGATGCTaGGGGTGGCTCTTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFCHAGC*GWLFSP
Trigger: AGGGGAGAAGAGCCACCCCCAGCATCCAGCGTGGCA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCAAACGGTTGAAGGTTaGAGACATCTGTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPQTVEG*RHLCPW
Trigger: CCATGGACACAGATGTCTCCAACCTTCAACCGTTTG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATTGTATTGTTTCAGCTaGCAGTGGCAGGTGGCCCCC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTLYCFS*QWQVAP
Trigger: GGGGGCCACCTGCCACTGCCAGCTGAAACAATACAA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGAAACACTGGTCTGAATaGCCTCTCCTTTGGTCAGCC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWKHWSE*PLLWSA
Trigger: GGCTGACCAAAGGAGAGGCCATTCAGACCAGTGTTT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCGGGGCTCTCTTGGGTaGCAGCTGTGCCGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAERGSLG*QLCRCL
Trigger: CAGGCAGCGGCACAGCTGCCACCCAAGAGAGCCCCG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGGAATGATGGAAGCGTaGGAAGGAAGGAGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSGMMEA*EGRSWL
Trigger: GAGCCAGCTCCTTCCTTCCCACGCTTCCATCATTCC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGCAGATGTACTTGCCTaGCTTCTGGGGCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGADVLA*LLGLPL
Trigger: GAGAGGAAGCCCCAGAAGCCAGGCAAGTACATCTGC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGCTTCTGGAGCACGCTaGGCTTGGCACAGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEASGAR*AWHRAG
Trigger: GCCGGCCCTGTGCCAAGCCCAGCGTGCTCCAGAAGC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATCCTGCTTTGATGCGGTaGGCATGGGACTTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDPALMR*AWDFLC
Trigger: GCACAGGAAGTCCCATGCCCACCGCATCAAAGCAGG...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATAGAGAAGGGGCTGCTTaGGTCTTGGGGAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDREGAA*VLGRAL
Trigger: CAGAGCTCTCCCCAAGACCCAAGCAGCCCCTTCTCT...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATAGCTGTATAGCCCGCTaGAGAGAAGGGGCTGCTTGG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDSCIAR*REGAAW
Trigger: CCAAGCAGCCCCTTCTCTCCAGCGGGCTATACAGCT...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATCGTGGCTGGAACTGTaGCTCCCAGAGCTGTATAGC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTSWLEL*LPELYS
Trigger: GCTATACAGCTCTGGGAGCCACAGTTCCAGCCACGA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCCTCGGAAGGGGTGGTaGGGGGTGCTGATAGTGCAG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFPRKGW*GVLIVQ
Trigger: CTGCACTATCAGCACCCCCCACCACCCCTTCCGAGG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCTGGCTTGGGAGTCCTTaGCTGGAAGCCCGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFWLGSP*LEARGS
Trigger: GGACCCACGGGCTTCCAGCCAAGGACTCCCAAGCCA...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGCGCTGGGGCCATTaGAACTCCTCAGTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTLRWGH*NSSVFS
Trigger: TGAGAAGACTGAGGAGTTCCAATGGCCCCAGCGCAG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGCCTCGGCTTTCCCATaGTCATCCCTCTCAAACGAG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSASAFP*SSLSNE
Trigger: CTCGTTTGAGAGGGATGACCATGGGAAAGCCGAGGC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGGGTGCCCAGGGGTTTaGGGCGCATGTCAGATGAGG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFGCPGV*GACQMR
Trigger: CCTCATCTGACATGCGCCCCAAACCCCTGGGCACCC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCGTGTCTCGGTCATGTaGGCAGAATGGGAAACGTTG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVRVSVM*AEWETL
Trigger: CAACGTTTCCCATTCTGCCCACATGACCGAGACACG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACTCCAACTCAGATTCTaGAGGCCTGCTCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSLQLRF*RPAQRG
Trigger: GCCTCTCTGAGCAGGCCTCCAGAATCTGAGTTGGAG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCTCCAACTCAGATTCTaGAGGCCTGCTCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGLQLRF*RPAQRG
Trigger: GCCTCTCTGAGCAGGCCTCCAGAATCTGAGTTGGAG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATGGGCAACGGGGTGGTaGAACACTTGCAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTWATGW*NTCSAS
Trigger: AGAAGCACTGCAAGTGTTCCACCACCCCGTTGCCCA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGTCTGGGCAACGGGGTaGTGGAACACTTGCAGTGCT +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDVWATG*WNTCSA
Trigger: AGCACTGCAAGTGTTCCACCACCCCGTTGCCCAGAC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCAAACCCCCGGAAGGTTaGGGTTGTACAAACTTATGC +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPKPPEG*GCTNLC
Trigger: GCATAAGTTTGTACAACCCCAACCTTCCGGGGGTTT...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGTGGCACTTTTTGCTGTaGGCCTTCGACTTCATGTGC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWWHFLL*AFDFMC
Trigger: GCACATGAAGTCGAAGGCCCACAGCAAAAAGTGCCA...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCGTCCTTCCGAGTCCTaGAACAGGTCGTCACTGGTT +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGRPSES*NRSSLV
Trigger: AACCAGTGACGACCTGTTCCAGGACTCGGAAGGACG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACTGGACAGCTCATCCTaGCTCTCCTCCTCATCCTCA +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSLDSSS*LSSSSS
Trigger: TGAGGATGAGGAGGAGAGCCAGGATGAGCTGTCCAG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATACATGGAGCAGCTGCTaGCTGTCAGGCGCTCAGCTT +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDTWSSC*LSGAQL
Trigger: AAGCTGAGCGCCTGACAGCCAGCAGCTGCTCCATGT...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGTCCGGGCCAGGATGTaGCCGTGGAAGTCATGGAGG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFVRARM*PWKSWR
Trigger: CCTCCATGACTTCCACGGCCACATCCTGGCCCGGAC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGAGTGCAGAGGCAGGTaGCTGAAGATGTTCTCCTCT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVECRGR*LKMFSS
Trigger: AGAGGAGAACATCTTCAGCCACCTGCCTCTGCACTC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTTCTGGATCCCACCGATaGGAATCAAGGGACATGGGG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGSGSHR*ESRDMG
Trigger: CCCCATGTCCCTTGATTCCCATCGGTGGGATCCAGA...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTCCTCTCCCTCTCCTTaGGGTAGTCCCCGCCCTCCA +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFSSPSP*GSPRPP
Trigger: TGGAGGGCGGGGACTACCCCAAGGAGAGGGAGAGGA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGTTCCTCGTCCGGGCTaGGAAGCGGGCAGAGGCCTC +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEVPRPG*EAGRGL
Trigger: GAGGCCTCTGCCCGCTTCCCAGCCCGGACGAGGAAC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGTCCTCAGGCTGATGTaGATGTGCCCTGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFVLRLM*MCPGLP
Trigger: GGGGAGCCCAGGGCACATCCACATCAGCCTGAGGAC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGGAAACGTCTGTTGCTaGACACTGGAAGCCAGATGC +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVGNVCC*TLEARC
Trigger: GCATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGGGGAAACGGTCCTGTaGCAAAGTGGTCCTGAAACA +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVGETVL*QSGPET
Trigger: TGTTTCAGGACCACTTTGCCACAGGACCGTTTCCCC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGGTCAAAAGAATCTGTaGTGGCTGGGTGAAGTATCA +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIGQKNL*WLGEVS
Trigger: TGATACTTCACCCAGCCACCACAGATTCTTTTGACC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGTGGCCTCCTGGGACTTaGAGGAGTCACTTTCTGTCA +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVWPPGT*RSHFLS
Trigger: TGACAGAAAGTGACTCCTCCAAGTCCCAGGAGGCCA...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGAAGTCTCCAATCCGTaGGCAGTCCCATGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSEVSNP*AVPWVR
Trigger: CCTAACCCATGGGACTGCCCACGGATTGGAGACTTC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGGAGGAAACCTTGGGTaGGTAGGCTGTTTGAGTACA +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWGGNLG*VGCLST
Trigger: TGTACTCAAACAGCCTACCCACCCAAGGTTTCCTCC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACCAGGGAGGAAACCTTaGGTGGGTAGGCTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTPGRKP*VGRLFE
Trigger: CTCAAACAGCCTACCCACCCAAGGTTTCCTCCCTGG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGTCTGTACCGAGGAATaGCCACCCCGCGCATTTCAA +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTVCTEE*PPRAFQ
Trigger: TTGAAATGCGCGGGGTGGCCATTCCTCGGTACAGAC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGAAACCTCGACCAGTTaGTTCCTCCCCCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDETSTS*FLPHCP
Trigger: TGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGGGAGCAGAGAGGAGTaGGGTTACTACCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDGSREE*GYYPGW
Trigger: CCATCCTGGGTAGTAACCCCACTCCTCTCTGCTCCC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGGGGCTAGAGGAATCTaGAAGCTAATTCTTTTAGGC +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIGARGI*KLILLG
Trigger: GCCTAAAAGAATTAGCTTCCAGATTCCTCTAGCCCC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTGGTCCTGTGTTCTCTaGCCCACGGATCCAGCCCCT +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFWSCVL*PTDPAP
Trigger: AGGGGCTGGATCCGTGGGTCAGAGAACACAGGACCA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000372583.6
ENST00000372584.5
CDS-3UTR TCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCATTTGTTCAGGATCCATaGCCTTCACAAAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPFVQDP*PSQRLQ
Trigger: CTGAAGTCTTTGTGAAGGTCATGGATCCTGAACAAA...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGATTACTCTTGGTCTTaGAGGAGAAGCCACAGGGGC +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSDYSWS*RRSHRG
Trigger: GCCCCTGTGGCTTCTCCTTCAAGACCAAGAGTAATC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATTCTTCCTCAGTGGAGTaGGTTCCAGGGTGGTTCCCA +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDSSSVE*VPGWFP
Trigger: TGGGAACCACCCTGGAACTCACTCCACTGAGGAAGA...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTCCAAGGAGGGCACTaGTTTACTTGGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTLQGGH*FTWFCW
Trigger: CCAGCAGAACCAAGTAAATCAGTGCCCTCCTTGGAG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAACATCACCAGGGAGCTaGAGTGCAAACTGGGATTGC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTTSPGS*SANWDC
Trigger: GCAATCCCAGTTTGCACTTCAGCTCCCTGGTGATGT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGTGAGAGGAGACAGCTaGAGTCTTGGAGACCCACAA +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSVRGDS*SLGDPQ
Trigger: TTGTGGGTCTCCAAGACTTCAGCTGTCTCCTCTCAC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGCTGAGGAAGTGGGATaGTTCGAGGAAAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDAEEVG*FEESGW
Trigger: CCAGCCACTTTCCTCGAATCATCCCACTTCCTCAGC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAATAAACAGGAACCTTaGTCGCATCTGTACACAGGA +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPNKQEP*SHLYTG
Trigger: TCCTGTGTACAGATGCGATCAAGGTTCCTGTTTATT...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGAGAGCCCTAGTCTCTaGGGGAAGCAGCCAGGAGCT +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFESPSL*GKQPGA
Trigger: AGCTCCTGGCTGCTTCCCTCAGAGACTAGGGCTCTC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCCAGACCTCAGCCCTTaGAGTCTCCAATCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFPDLSP*SLQSVG
Trigger: GCCCACGGATTGGAGACTTCAAGGGCTGAGGTCTGG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGAAAATATCCTCAGGCTaGACACTCAGCCAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWKISSG*TLSQSC
Trigger: ACAGCTCTGGCTGAGTGTTCAGCCTGAGGATATTTT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTCCTGGCACAAGAGATaGCACGCTGGATGCTGGGGG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFSWHKR*HAGCWG
Trigger: CCCCCAGCATCCAGCGTGGCATCTCTTGTGCCAGGA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGTCCCCCGTGTGCTATaGAAACGGTTGAAGGTTGGA +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTVPRVL*KRLKVG
Trigger: TCCAACCTTCAACCGTTTGCATAGCACACGGGGGAC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGCACAAAGACTTCAGATaGTATTCAGGGAGAGTCAGG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGHKDFR*YSGRVR
Trigger: CCTGACTCTCCCTGAATAGCATCTGAAGTCTTTGTG...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGACCCCTCCAGGAGATaGTCAGGTTTGCCAGGCGAC +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFDPSRR*SGLPGD
Trigger: GTCGCCTGGCAAACCTGAGCATCTCCTGGAGGGGTC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCCTCTTCAGAATCTGTaGTTTCTCCCTCAGTGGGCT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVPLQNL*FLPQWA
Trigger: AGCCCACTGAGGGAGAAAGCACAGATTCTGAAGAGG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCTGGAGAGAAGGGGCTaGTTGGGTCTTGGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFLERRG*LGLGES
Trigger: GCTCTCCCCAAGACCCAAGCAGCCCCTTCTCTCCAG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCATTATGGCTCAGGGGGTaGTCAGATGAGGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSLWLRG*SDEGST
Trigger: TGTGGAACCCTCATCTGAGCACCCCCTGAGCCATAA...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGGGCTCAGAAACGCCTaGTCATCGATCACCTTCTTC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTGLRNA*SSITFF
Trigger: GAAGAAGGTGATCGATGAGCAGGCGTTTCTGAGCCC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTATGTGCTCGATCACCTaGGTCCGGGGTACAGACAAA +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGMCSIT*VRGTDK
Trigger: TTTGTCTGTACCCCGGACGCAGGTGATCGAGCACAT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTTTCCTGGCTCGGGCTaGGAGACAGAGGCACAGAGG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFFPGSG*ETEAQR
Trigger: CCTCTGTGCCTCTGTCTCGCAGCCCGAGCCAGGAAA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCAGTCAACATGTGGGTaGCCAGGGGTTTGGGGCGCA +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFQSTCG*PGVWGA
Trigger: TGCGCCCCAAACCCCTGGGCACCCACATGTTGACTG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGAAACGTTGGGGCTCTaGTCTGAGGCTGACCTCCGC +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFETLGL*SEADLR
Trigger: GCGGAGGTCAGCCTCAGAGCAGAGCCCCAACGTTTC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGAAACGTTGGGGCTCTaGTCTGAGGCTGACCTCCGC +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFETLGL*SEADLR
Trigger: GCGGAGGTCAGCCTCAGAGCAGAGCCCCAACGTTTC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCATAGTCAAAGGATTTaGTGCGTGTCTCGGTCATGT +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPHSQRI*CVSRSC
Trigger: ACATGACCGAGACACGCAGCAAATCCTTTGACTATG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGTGGAACACTTGCAGTaGTTCTGTGTAGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVVEHLQ*FCVGHS
Trigger: ACTGTGCCCTACACAGAAGCACTGCAAGTGTTCCAC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATTGTCCTGGCTCATGCTaGACGAGATGCTGGAAGGAG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDCPGSC*TRCWKE
Trigger: CTCCTTCCAGCATCTCGTGCAGCATGAGCCAGGACA...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAACCAGGGAGCTGAAGTaGAAACTGGGATTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTTRELK*KLGLQR
Trigger: CCTCTGCAATCCCAGTTTGCACTTCAGCTCCCTGGT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCAGAGAGCTCGGAGGTaGCAAGGAGGGGAGATCAGG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFQRARR*QGGEIR
Trigger: CCTGATCTCCCCTCCTTGGCACCTCCGAGCTCTCTG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTTGGAGGCTGGGGAACTaGAGTACCTTCTTTGAGTCC +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGWRLGN*STFFES
Trigger: GGACTCAAAGAAGGTACTGCAGTTCCCCAGCCTCCA...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGGTTGTACAAACTTATaGACCAACCAGCGTAAACAG +
Preference number: 4 (lower is better)
Translates to: GTGFRELSSPGHTADRSPGCTNL*TNQRKQ
Trigger: CTGTTTACGCTGGTTGGTGCATAAGTTTGTACAACC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCTTCCTGCCTCAGGATaGGGAGCTGTGGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFLPASG*GAVAMV
Trigger: CACCATGGCCACAGCTCCGCATCCTGAGGCAGGAAG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGTGTGTTTCTTCAGCATaGTGGGCTTCTTGCAGCGAA +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWCVSSA*WASCSE
Trigger: TTCGCTGCAAGAAGCCCAGCATGCTGAAGAAACACA...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCAAAGTGACAGTGCTTaGACACATAGGGCCGGACGT +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGQSDSA*THRAGR
Trigger: ACGTCCGGCCCTATGTGTGCAAGCACTGTCACTTTG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCATTTGGAGAGCACATGTaGTCGAGGGGCCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSFGEHM*SRGQFS
Trigger: AGAGAACTGGCCCCTCGAGCACATGTGCTCTCCAAA...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATTTGGAGAGCACATGTaGTCGAGGGGCCAGTTCTCT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTFGEHM*SRGQFS
Trigger: AGAGAACTGGCCCCTCGAGCACATGTGCTCTCCAAA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTGTGGGCTCTGCAGGTaGCCCGGTCCCATGGGGTGT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAECGLCR*PGPMGC
Trigger: ACACCCCATGGGACCGGGGCACCTGCAGAGCCCACA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTAGGCTGATGTGGATGTaGCCTGGGCTCCCCACTTCC +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFRLMWM*PGLPTS
Trigger: GGAAGTGGGGAGCCCAGGGCACATCCACATCAGCCT...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCAAAGGCACAGGTAACTaGATACATGGGAAGGTACAA +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTKGTGN*IHGKVQ
Trigger: TTGTACCTTCCCATGTATGCAGTTACCTGTGCCTTT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGTTCCCCGCAAACCTCTaGTGTGGAGAACTGGAAAAA +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWFPANL*CGELEK
Trigger: TTTTTCCAGTTCTCCACAGCAGAGGTTTGCGGGGAA...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGCCGGGCCTCTGCCCTaGCGGCTGCACTGTTCATTG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEAGPLP*RLHCSL
Trigger: CAATGAACAGTGCAGCCGGCAGGGCAGAGGCCCGGC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCCAGCTCAGATGTATTaGTCATTCCTCTTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPPAQMY*SFLFRR
Trigger: CCTTCTGAAGAGGAATGAGCAATACATCTGAGCTGG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCCATCCCAGTGCGGTTaGTGTACATATCTACAGTAC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWPSQCG*CTYLQY
Trigger: GTACTGTAGATATGTACAGCAACCGCACTGGGATGG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCACCAACATTGCAAGATaGAAGTGTGGAAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTTNIAR*KCGNWS
Trigger: ACTCCAGTTTCCACACTTGCATCTTGCAATGTTGGT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGGAGATCAACGGCCTTaGAGGAGAAATCACGCTCTT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVGDQRP*RRNHAL
Trigger: AAGAGCGTGATTTCTCCTCCAAGGCCGTTGATCTCC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCCTTTAGTTCTGGGTTaGAGATCAACGGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVPLVLG*RSTALE
Trigger: CTCCAAGGCCGTTGATCTCCAACCCAGAACTAAAGG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATAGTCATCCCTGGTCCTaGCACAAGAGATGCCACGCT +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDSHPWS*HKRCHA
Trigger: AGCGTGGCATCTCTTGTGCCAGGACCAGGGATGACT...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCAAACGGTTGAAGGTTaGAGACATCTGTGTCCATGG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWQTVEG*RHLCPW
Trigger: CCATGGACACAGATGTCTCCAACCTTCAACCGTTTG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCTGGGTATGGGACGCTaGAAGAAACACTGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVLGMGR*KKHWSE
Trigger: TTCAGACCAGTGTTTCTTCCAGCGTCCCATACCCAG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTGGGCTGTGCTGGACTaGGACAGGGAACAGCGTTCG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFWAVLD*DREQRS
Trigger: CGAACGCTGTTCCCTGTCCCAGTCCAGCACAGCCCA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGGGTCTTCGAGTGACTaGGCTGTGCTGGACTGGGAC +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFGSSSD*AVLDWD
Trigger: GTCCCAGTCCAGCACAGCCCAGTCACTCGAAGACCC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGTGTCTTCAGGTTTATaGCTCAGGGGGTGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVVSSGL*LRGCSD
Trigger: ATCTGAGCACCCCCTGAGCCATAAACCTGAAGACAC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGTAGAGGCTGGATTTTaGGGACTCCATGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDVEAGF*GLHAAA
Trigger: CGCAGCAGCATGGAGTCCCCAAAATCCAGCCTCTAC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATTTGGTTTTCTCACTGTaGGATGACAGGGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDLVFSL*DDRGSR
Trigger: CCGGGAGCCCCTGTCATCCCACAGTGAGAAAACCAA...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGTGATTGTTCAGGCTTaGTTTTCTCACTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGVIVQA*FSHCGM
Trigger: CATCCCACAGTGAGAAAACCAAGCCTGAACAATCAC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGCAGAAGGCATTGAGTaGCTTCTCAGGAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSAEGIE*LLRRGT
Trigger: TGTGCCTCTCCTGAGAAGCCACTCAATGCCTTCTGC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCAATTCGATTGCCGGCTaGCGCTTCAGCATCCGGGGG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFNSIAG*RFSIRG
Trigger: CCCCCGGATGCTGAAGCGCCAGCCGGCAATCGAATT...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCATGTGTCTTTGCTGCTTaGGCCAGGCTCCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSCVFAA*ARLLRT
Trigger: AGTTCTGAGGAGCCTGGCCCAAGCAGCAAAGACACA...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATCCTCCTCTTCCTCAGTaGAGTGAGTTCCAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDPPLPQ*SEFQGG
Trigger: ACCACCCTGGAACTCACTCCACTGAGGAAGAGGAGG...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCAAGGAGCTGGTGTGCTaGATGACAGAAATTTCTTTG +
Preference number: 4 (lower is better)
Translates to: LYRGMATPRISTEHVAGIKELVC*MTEISL
Trigger: CAAAGAAATTTCTGTCATCCAGCACACCAGCTCCTT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTTCTCAGCTGGGAGCTaGGCAAGTGTCTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFFSAGS*ASVWLR
Trigger: GCGCAGCCAGACACTTGCCCAGCTCCCAGCTGAGAA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGCAACCTCTTCTTTTTaGGTGGCAGCTTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVATSSF*VAASQL
Trigger: CAGCTGAGAAGCTGCCACCCAAAAAGAAGAGGTTGC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGGGACAGTCAACATGTaGGTGCCCAGGGGTTTGGGG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFGTVNM*VPRGLG
Trigger: CCCCAAACCCCTGGGCACCCACATGTTGACTGTCCC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCTCTCGGGCATGTGGGTaGTGGCTGGGGACAGTCAAC +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFSRACG*WLGTVN
Trigger: GTTGACTGTCCCCAGCCACCACCCACATGCCCGAGA...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATCTCCAACTCAGATTCTaGAGGCCTGCTCAGAGAGGC +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDLQLRF*RPAQRG
Trigger: GCCTCTCTGAGCAGGCCTCCAGAATCTGAGTTGGAG...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGTGGCAGAGGGTTTACTaGATGAGGGCTGTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVWQRVY*MRAVVL
Trigger: AAGAACCACAGCCCTCATCCAGTAAACCCTCTGCCA...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATTCTGGAGACTGTCCTaGCTCATGCTGCACGAGATG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTFWRLS*LMLHEM
Trigger: CATCTCGTGCAGCATGAGCCAGGACAGTCTCCAGAA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAAGGCTGGACATGGCCTaGGTGGAGAAGAATTCTGGA +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSRLDMA*VEKNSG
Trigger: TCCAGAATTCTTCTCCACCCAGGCCATGTCCAGCCT...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCATTGATCTGGGGCAGATaGCTTTCCACATCACCAGGG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSLIWGR*LSTSPG
Trigger: CCCTGGTGATGTGGAAAGCCATCTGCCCCAGATCAA...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACCCTGGTTGCCTAAGTaGGATTTCTCTGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSPWLPK*DFSGLF
Trigger: GAAGAGGCCAGAGAAATCCCACTTAGGCAACCAGGG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGTGACTTGGCTGGTCTaGAGGACGTTTCTGACAGAG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTVTWLV*RTFLTE
Trigger: CTCTGTCAGAAACGTCCTCCAGACCAGCCAAGTCAC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGTGACTTGGCTGGTCTaGAGGACGTTTCTGACAGAG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGVTWLV*RTFLTE
Trigger: CTCTGTCAGAAACGTCCTCCAGACCAGCCAAGTCAC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATGGTTGTGTGGAGGCTaGGGAACTGCAGTACCTTCT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTWLCGG*GTAVPS
Trigger: AGAAGGTACTGCAGTTCCCCAGCCTCCACACAACCA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACAGGATGCGGAGCTGTaGCCATGGTGTATGTCTCTT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTQDAEL*PWCMSL
Trigger: AAGAGACATACACCATGGCCACAGCTCCGCATCCTG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCTTGCGGGAGCTGGATaGCACAAGCCTTCCTGCCTC +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFLAGAG*HKPSCL
Trigger: GAGGCAGGAAGGCTTGTGCCATCCAGCTCCCGCAAG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGTGGCACTTTTTGCTGTaGGCCTTCGACTTCATGTGC +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVWHFLL*AFDFMC
Trigger: GCACATGAAGTCGAAGGCCCACAGCAAAAAGTGCCA...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATCGTCCTTCCGAGTCCTaGAACAGGTCGTCACTGGTT +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDRPSES*NRSSLV
Trigger: AACCAGTGACGACCTGTTCCAGGACTCGGAAGGACG...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATCCTCTGAGGATGGTCTaGACAGCTCATCCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDPLRMV*TAHPGS
Trigger: AGAGCCAGGATGAGCTGTCCAGACCATCCTCAGAGG...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAAGACAGCTGAAGTCTTaGAGACCCACAAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTRQLKS*RPTRES
Trigger: GCTCTCCCTTGTGGGTCTCCAAGACTTCAGCTGTCT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGAGGCCTGGGTCGGTaGTACCCTCGAGTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGGLGR*YPRVWR
Trigger: TCTCCAAACTCGAGGGTACCACCGACCCAGGCCTCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATTCTGGATCCCACCGATaGGAATCAAGGGACATGGGG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDSGSHR*ESRDMG
Trigger: CCCCATGTCCCTTGATTCCCATCGGTGGGATCCAGA...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCGGGCCTGCACCATCTaGATCCCACCGATGGGAATC +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFRACTI*IPPMGI
Trigger: GATTCCCATCGGTGGGATCCAGATGGTGCAGGCCCG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTGGCCTGCCCACCTGTaGAGTGCCAGGATGGGCCCA +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEWPAHL*SARMGP
Trigger: TGGGCCCATCCTGGCACTCCACAGGTGGGCAGGCCA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCAAAAGAATCTGTGGTaGCTGGGTGAAGTATCAAAC +
Preference number: 4 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDQKNLW*LGEVSN
Trigger: GTTTGATACTTCACCCAGCCACCACAGATTCTTTTG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAAGGCTGGACTGTGGCTaGTTTGTCTGTCTAGTAGGG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTRLDCG*FVCLVG
Trigger: CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACACTGTCCAGCAATATaGACAGTGTGGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTHCPAI*TVWSRL
Trigger: CAGCCTGGACCACACTGTCCATATTGCTGGACAGTG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGGTGTACCTGTGGGCTaGGGGCTCTGTGCGCAGAGG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEGVPVG*GLCAQR
Trigger: CCTCTGCGCACAGAGCCCCCAGCCCACAGGTACACC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGAAGAAACACTGGTCTaGATGGCCTCTCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSEETLV*MASPLV
Trigger: GACCAAAGGAGAGGCCATTCAGACCAGTGTTTCTTC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACACACTTGCCAAAGATaGTCTCAGCGTAGGACTTGG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSHTCQR*SQRRTW
Trigger: CCAAGTCCTACGCTGAGATCATCTTTGGCAAGTGTG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTTTCTCACTGTGGGATaGCAGGGGCTCCCGGTAGAG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFFLTVG*QGLPVE
Trigger: CTCTACCGGGAGCCCCTGTCATCCCACAGTGAGAAA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATAGAGGGTTTACTGGATaGGGGCTGTGGTTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDRGFTG*GLWFFA
Trigger: AGCGAAGAACCACAGCCCTCATCCAGTAAACCCTCT...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGTCAACCCTCTTCGGTaGGGTTTGCCAGATGGCTGG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFVNPLR*GLPDGW
Trigger: CCAGCCATCTGGCAAACCTCACCGAAGAGGGTTGAC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATCTGTGGTGGCTGGGTaGAGTATCAAACACCATCCT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTSVVAG*SIKHHP
Trigger: AGGATGGTGTTTGATACTTCACCCAGCCACCACAGA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGGCACTGGCTCACACTaGTTGCTTTGGAGAATTCCA +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGGTGSH*LLWRIP
Trigger: TGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGGCACTGGCTCACACTaGTTGCTTTGGAGAATTCCA +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSGTGSH*LLWRIP
Trigger: TGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCATGGCCCTCTACTTTaGAGACAGAAAACGCACCAG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGHGPLL*RQKTHQ
Trigger: CTGGTGCGTTTTCTGTCTGCAAAGTAGAGGGCCATG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACATGGCCCTCTACTTTaGAGACAGAAAACGCACCAG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSHGPLL*RQKTHQ
Trigger: CTGGTGCGTTTTCTGTCTGCAAAGTAGAGGGCCATG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGCTGGTGTCAGAGGGTaGTGCGGAAGCTGTGAGATG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFAGVRG*CGSCEM
Trigger: CATCTCACAGCTTCCGCAGCACCCTCTGACACCAGC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGCGGTACTGGGCGGGTaGTGGAGGCTCAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEAVLGG*WRLSSD
Trigger: ATCACTGCTGAGCCTCCAGCACCCGCCCAGTACCGC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCAGGCTGTGTCTTTGCTaGTTGGGCCAGGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFRLCLC*LGQAPQ
Trigger: CTGAGGAGCCTGGCCCAAGCAGCAAAGACACAGCCT...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCTCAAAGGAGCTGGTGTaGTGGATGACAGAAATTTCT +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPSKELV*WMTEIS
Trigger: AGAAATTTCTGTCATCCAGCACACCAGCTCCTTTGA...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGTCAAAGGAGCTGGTGTaGTGGATGACAGAAATTTCT +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGSKELV*WMTEIS
Trigger: AGAAATTTCTGTCATCCAGCACACCAGCTCCTTTGA...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTTCCAAGCCACTCGGCTaGTCGAGAGAATCAGATTTC +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGSKPLG*SRESDF
Trigger: GAAATCTGATTCTCTCGAGCAGCCGAGTGGCTTGGA...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAAGTCAAAGGATTTGCTaGGTGTCTCGGTCATGTGGG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTSQRIC*VSRSCG
Trigger: CCCACATGACCGAGACACGCAGCAAATCCTTTGACT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAAACCTCATGCACATCTaGACCACATACAGTCGTCCC +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSNLMHI*TTYSRP
Trigger: GGGACGACTGTATGTGGTGCAGATGTGCATGAGGTT...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGAGTTGGGAAAGCTCTaGTTTGCTCTTCACTTAACC +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWELGKL*FALHLT
Trigger: GGTTAAGTGAAGAGCAAAGCAGAGCTTTCCCAACTC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACTCTTCGGTGAGGTTTaGCAGATGGCTGGGGATATT +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSLFGEV*QMAGDI
Trigger: AATATCCCCAGCCATCTGGCAAACCTCACCGAAGAG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATAGGTCCGAAAACTGGTaGTCCTCCACAGCCTCTGAA +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDRSENW*SSTASE
Trigger: TTCAGAGGCTGTGGAGGAGCACCAGTTTTCGGACCT...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGCTGCCTGCTTCTTTaGTTGGGGACCACGGTCTTC +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGCLLL*LGTTVF
Trigger: GAAGACCGTGGTCCCCAAGCAAAGAAGCAGGCAGCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTGGTGGACGGCTGCCTaGTTCTTTGCTTGGGGACCA +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFWWTAA*FFAWGP
Trigger: TGGTCCCCAAGCAAAGAAGCAGGCAGCCGTCCACCA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCCTCCTCCTTCTACCTaGACCTATTATTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPPPPST*TYYFVL
Trigger: CAACACAAAATAATAGGTGCAGGTAGAAGGAGGAGG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGGCCCTGCCACTTCTaGCTTTGTGGGTGGTTTGGT +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGPCHF*LCGWFG
Trigger: ACCAAACCACCCACAAAGGCAGAAGTGGCAGGGCCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGAAGCAGCCAGGAGCTaGTGGCTAACCCTGATTCCC +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFEAARS*WLTLIP
Trigger: GGGAATCAGGGTTAGCCAGCAGCTCCTGGCTGCTTC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCCAGCTCAGATGTATTaGTCATTCCTCTTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWPAQMY*SFLFRR
Trigger: CCTTCTGAAGAGGAATGAGCAATACATCTGAGCTGG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAAGGCTGCTGGGTTTGTaGCTCGAATCCTGCCAAAAA +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTRLLGL*LESCQK
Trigger: TTTTTGGCAGGATTCGAGGCACAAACCCAGCAGCCT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCCTTTAGTTCTGGGTTaGAGATCAACGGCCTTGGAG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGPLVLG*RSTALE
Trigger: CTCCAAGGCCGTTGATCTCCAACCCAGAACTAAAGG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTGCCACGCTGGATGCTaGGGGTGGCTCTTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAECHAGC*GWLFSP
Trigger: AGGGGAGAAGAGCCACCCCCAGCATCCAGCGTGGCA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCAAGAGATGCCACGCTaGATGCTGGGGGTGGCTCTT +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFQEMPR*MLGVAL
Trigger: AAGAGCCACCCCCAGCATCCAGCGTGGCATCTCTTG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGTCTATTGGTGAGGCATaGCCCTCTACTTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVSIGEA*PSTLQT
Trigger: TGTCTGCAAAGTAGAGGGCCATGCCTCACCAATAGA...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACGCTGGAAGAAACACTaGTCTGAATGGCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSRWKKH*SEWPLL
Trigger: AAGGAGAGGCCATTCAGACCAGTGTTTCTTCCAGCG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGCCGCTGCCTGGGTATaGGACGCTGGAAGAAACACT +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFAAAWV*DAGRNT
Trigger: AGTGTTTCTTCCAGCGTCCCATACCCAGGCAGCGGC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGCTTCAAGGAGACCTaGGAAGGACGAGGCACGAAG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGFKET*EGRGTK
Trigger: CTTCGTGCCTCGTCCTTCCCAGGTCTCCTTGAAGCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCCTGCTTTGATGCGGTaGGCATGGGACTTCCTGTGC +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFPALMR*AWDFLC
Trigger: GCACAGGAAGTCCCATGCCCACCGCATCAAAGCAGG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCACTCCCTTTGCTGCCTaGGCTCAGAAACGCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFTPFAA*AQKRLL
Trigger: GAGCAGGCGTTTCTGAGCCCAGGCAGCAAAGGGAGT...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGACTCAAAGGCAGGTaGCTCTTCCTCGTCCCCAAG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGLKGR*LFLVPK
Trigger: CTTGGGGACGAGGAAGAGCCACCTGCCTTTGAGTCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCAAGGAGCTGGTGTGCTaGATGACAGAAATTTCTTTG +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPKELVC*MTEISL
Trigger: CAAAGAAATTTCTGTCATCCAGCACACCAGCTCCTT...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGAAGGAGCTGGTGTGCTaGATGACAGAAATTTCTTTG +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGKELVC*MTEISL
Trigger: CAAAGAAATTTCTGTCATCCAGCACACCAGCTCCTT...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGGGGTGATGGGAACTaGGCCAGAGGTTTGTCTTCC +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGGDGN*ARGLSS
Trigger: GGAAGACAAACCTCTGGCCCAGTTCCCATCACCCCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGCAACCTCTTCTTTTTaGGTGGCAGCTTCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGATSSF*VAASQL
Trigger: CAGCTGAGAAGCTGCCACCCAAAAAGAAGAGGTTGC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATGGCAGAGGGTTTACTaGATGAGGGCTGTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTWQRVY*MRAVVL
Trigger: AAGAACCACAGCCCTCATCCAGTAAACCCTCTGCCA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGGGACAATGAGCTTTTaGCAGAGGGTTTACTGGATG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVGTMSF*QRVYWM
Trigger: CATCCAGTAAACCCTCTGCCAAAAGCTCATTGTCCC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGCCGCAGAGGAAATCTaGGACAATGAGCTTTTGGCA +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSAAEEI*DNELLA
Trigger: TGCCAAAAGCTCATTGTCCCAGATTTCCTCTGCGGC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTTGCTGCACGAGATGCTaGAAGGAGAAAAGGGAGACT +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGCCTRC*KEKRET
Trigger: AGTCTCCCTTTTCTCCTTCCAGCATCTCGTGCAGCA...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATTTGATCTGGGGCAGATaGCTTTCCACATCACCAGGG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDLIWGR*LSTSPG
Trigger: CCCTGGTGATGTGGAAAGCCATCTGCCCCAGATCAA...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAAGGCTGGTTTTGATCTaGGGCAGATGGCTTTCCACA +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSRLVLI*GRWLST
Trigger: TGTGGAAAGCCATCTGCCCCAGATCAAAACCAGCCT...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAAGATCTGGGAAAGGGTaGTGTACATTGCGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTRSGKG*CTLRSH
Trigger: ATGGGAGCGCAATGTACACCACCCTTTCCCAGATCT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATCCCTGGTTGCCTAAGTaGGATTTCTCTGGCCTCTTC +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDPWLPK*DFSGLF
Trigger: GAAGAGGCCAGAGAAATCCCACTTAGGCAACCAGGG...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGGTTTGCCAGATGGCTaGGGATATTCCTTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVGLPDG*GYSFKA
Trigger: AGCTTTGAAGGAATATCCCCAGCCATCTGGCAAACC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGTGAGGTTTGCCAGATaGCTGGGGATATTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVVRFAR*LGIFLQ
Trigger: TTGAAGGAATATCCCCAGCCATCTGGCAAACCTCAC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGATCAGGTTGTTCCTTaGAATCTTCTTTCTTCACGC +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPDQVVP*NLLSSR
Trigger: GCGTGAAGAAAGAAGATTCCAAGGAACAACCTGATC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAACATTAGTGGTTGTGTaGAGGCTGGGGAACTGCAGT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTTLVVV*RLGNCS
Trigger: ACTGCAGTTCCCCAGCCTCCACACAACCACTAATGT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTAGCTAGATCTTTCTaGCCTTCCGGGGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTLARSF*PSGETS
Trigger: ACTGGTTTCCCCGGAAGGCCAGAAAGATCTAGCTAG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGGAACAGGTCGTCACTaGTTCCTTCTTCGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDGTGRH*FLLRLP
Trigger: TGGAAGCCGAAGAAGGAACCAGTGACGACCTGTTCC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGTATCTGGGGAGGCCTaGGTCGGTGGTACCCTCGAG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEVSGEA*VGGTLE
Trigger: CTCGAGGGTACCACCGACCCAGGCCTCCCCAGATAC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGGAAACGTCTGTTGCTaGACACTGGAAGCCAGATGC +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDGNVCC*TLEARC
Trigger: GCATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGATGATTCGAGGAAAGTaGCTGGAAACGTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWMIRGK*LETSVA
Trigger: AGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAATGGGGCTGAGGAAGTaGGATGATTCGAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSMGLRK*DDSRKV
Trigger: CACTTTCCTCGAATCATCCCACTTCCTCAGCCCCAT...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCCGTGGGCAGTCCCATaGGTTAGGGCTGAAAGGCAA +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFPWAVP*VRAERQ
Trigger: TTGCCTTTCAGCCCTAACCCATGGGACTGCCCACGG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTATATACCCAGGCTGGTaGCATTGGTTCTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGIYPGW*HWFCPS
Trigger: AGAGGGACAGAACCAATGCCACCAGCCTGGGTATAT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CAA 72 bp TCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCTTaGGTGAGATTCTATTTGTGCATTTACCCCCATCAT +
Preference number: 4 (lower is better)
Translates to: SLWARHQCGGSP*VRFYLCIYPHH
Trigger: ATGATGGGGGTAAATGCACAAATAGAATCTCACCAAAGGGCTGCCTCCACATTGATGCCGTGCCCAGAGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCTCCATGAACTAGGTTaGGGCTGCTGGGTTTGTGCC +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFLHELG*GCWVCA
Trigger: GGCACAAACCCAGCAGCCTCAACCTAGTTCATGGAG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCATGCTATGCAAACGGTTaGAGGTTGGAGACATCTGTG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSCYANG*RLETSV
Trigger: CACAGATGTCTCCAACCTTCAACCGTTTGCATAGCA...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTACGCTATTCTATTGGTaGGGCATGGCCCTCTACTTT +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGTLFYW*GMALYF
Trigger: AAAGTAGAGGGCCATGCCTCACCAATAGAATAGCGT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGTTTGTTCAGGATCCATaGCCTTCACAAAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWFVQDP*PSQRLQ
Trigger: CTGAAGTCTTTGTGAAGGTCATGGATCCTGAACAAA...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATCTGGAGGCTCAGCAGTaGTTGTTCAGGCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDLEAQQ*LFRLGF
Trigger: AAAACCAAGCCTGAACAATCACTGCTGAGCCTCCAG...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGAAGCGGTGGGGCTTaGAATAAGGAGGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGSGGA*NKEGGS
Trigger: ACTTCCTCCCTCCTTATTTCAAGCCCCACCGCTTCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGGAAGCGGTGGGGCTTaGAATAAGGAGGGAGGAAGT +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFGSGGA*NKEGGS
Trigger: ACTTCCTCCCTCCTTATTTCAAGCCCCACCGCTTCC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGACGGCATATTGGTCTaGACACGGACAGGCACAACC +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFDGILV*TRTGTT
Trigger: GGTTGTGCCTGTCCGTGTTCAGACCAATATGCCGTC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTTCCTTCAAAGCTTCTaGGCCTGGGGCTGTCCCATG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFFLQSF*AWGCPM
Trigger: CATGGGACAGCCCCAGGCTCAGAAGCTTTGAAGGAA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGCTGAGGAAGTGGGATaGTTCGAGGAAAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFAEEVG*FEESGW
Trigger: CCAGCCACTTTCCTCGAATCATCCCACTTCCTCAGC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCCAGACCTCAGCCCTTaGAGTCTCCAATCCGTGGGC +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEPDLSP*SLQSVG
Trigger: GCCCACGGATTGGAGACTTCAAGGGCTGAGGTCTGG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGATTTCTAACCTGGGCTaGAGCAATGCCCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVISNLG*SNALYA
Trigger: TGCATAAAGGGCATTGCTTCAGCCCAGGTTAGAAAT...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGAGGCAGCCCTTTGGTaGGATTCTATTTGTGCATTT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVEAALW*DSICAF
Trigger: AAATGCACAAATAGAATCTCACCAAAGGGCTGCCTC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCACACACATCAATACTaGGCATTTTTCCTTTTGTAC +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTHTHQY*AFFLLY
Trigger: GTACAAAAGGAAAAATGCTCAGTATTGATGTGTGTG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCAGTACTCCCTTTGCTaGCTGGGCTCAGAAACGCCT +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFQYSLC*LGSETP
Trigger: AGGCGTTTCTGAGCCCAGGCAGCAAAGGGAGTACTG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCATGAGCTTCGTGATGTaGTCGATCACCTGCGTCCGG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFMSFVM*SITCVR
Trigger: CCGGACGCAGGTGATCGAGCACATCACGAAGCTCAT...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGGGCAAGTGTCTGGCTaGGCTGGGGCCATTGGAACT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEGQVSG*AGAIGT
Trigger: AGTTCCAATGGCCCCAGCGCAGCCAGACACTTGCCC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGAAACGTTGGGGCTCTaGTCTGAGGCTGACCTCCGC +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEETLGL*SEADLR
Trigger: GCGGAGGTCAGCCTCAGAGCAGAGCCCCAACGTTTC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATAACCTCATGCACATCTaGACCACATACAGTCGTCCC +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDNLMHI*TTYSRP
Trigger: GGGACGACTGTATGTGGTGCAGATGTGCATGAGGTT...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCCGGGCCCAACCTCATaGACATCTGCACCACATACA +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFPGPTS*TSAPHT
Trigger: TGTATGTGGTGCAGATGTGCATGAGGTTGGGCCCGG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGAGTTGGGAAAGCTCTaGTTTGCTCTTCACTTAACC +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVELGKL*FALHLT
Trigger: GGTTAAGTGAAGAGCAAAGCAGAGCTTTCCCAACTC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATCTCTTCGGTGAGGTTTaGCAGATGGCTGGGGATATT +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDLFGEV*QMAGDI
Trigger: AATATCCCCAGCCATCTGGCAAACCTCACCGAAGAG...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTAGAGGACCTCCTATCTaGATGCTGGATGTGATTTGG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGRGPPI*MLDVIW
Trigger: CCAAATCACATCCAGCATGCAGATAGGAGGTCCTCT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCTTCCTGCCTCAGGATaGGGAGCTGTGGCCATGGTG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAELPASG*GAVAMV
Trigger: CACCATGGCCACAGCTCCGCATCCTGAGGCAGGAAG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGCTCCTGGCCGGGCCTaGACCATCTGGATCCCACCG +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETAPGRA*TIWIPP
Trigger: CGGTGGGATCCAGATGGTGCAGGCCCGGCCAGGAGC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTCCCCTGTCAGGTCGCTaGCACCCCCGGAGAAGCCAC +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETPLSGR*HPRRSH
Trigger: GTGGCTTCTCCGGGGGTGGCAGCGACCTGACAGGGG...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGAAAGGCACAGGTAACTaGATACATGGGAAGGTACAA +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWKGTGN*IHGKVQ
Trigger: TTGTACCTTCCCATGTATGCAGTTACCTGTGCCTTT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTTCTGGGGTGGGTGGCTaGCAACCACAGCGGGGAGGG +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETSGVGG*QPQRGG
Trigger: CCCTCCCCGCTGTGGTTGGCAGCCACCCACCCCAGA...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCCTGGGCTGAAGCAATaGCCTTTATGCAGCTCCCAG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFPGLKQ*PLCSSQ
Trigger: CTGGGAGCTGCATAAAGGGCATTGCTTCAGCCCAGG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACCATCCCAGTGCGGTTaGTGTACATATCTACAGTAC +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSPSQCG*CTYLQY
Trigger: GTACTGTAGATATGTACAGCAACCGCACTGGGATGG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATCTGGGTATGGGACGCTaGAAGAAACACTGGTCTGAA +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDLGMGR*KKHWSE
Trigger: TTCAGACCAGTGTTTCTTCCAGCGTCCCATACCCAG...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCAGGGTCCAGGTCTCATaGGGTCAACCAGTTGCCATG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFRVQVS*GQPVAM
Trigger: CATGGCAACTGGTTGACCCCATGAGACCTGGACCCT...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGCTTCTGGAGCACGCTaGGCTTGGCACAGGGCCGGC +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETASGAR*AWHRAG
Trigger: GCCGGCCCTGTGCCAAGCCCAGCGTGCTCCAGAAGC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGTTCTGCTTAATCGTGTaGGTGTCTTCAGGTTTATGG +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWFCLIV*VSSGLW
Trigger: CCATAAACCTGAAGACACCCACACGATTAAGCAGAA...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGTAGAGGCTGGATTTTaGGGACTCCATGCTGCTGCG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFVEAGF*GLHAAA
Trigger: CGCAGCAGCATGGAGTCCCCAAAATCCAGCCTCTAC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGTGATTGTTCAGGCTTaGTTTTCTCACTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVVIVQA*FSHCGM
Trigger: CATCCCACAGTGAGAAAACCAAGCCTGAACAATCAC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCCTCCTCTTCCTCAGTaGAGTGAGTTCCAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFPPLPQ*SEFQGG
Trigger: ACCACCCTGGAACTCACTCCACTGAGGAAGAGGAGG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTTCTCAGCTGGGAGCTaGGCAAGTGTCTGGCTGCGC +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEFSAGS*ASVWLR
Trigger: GCGCAGCCAGACACTTGCCCAGCTCCCAGCTGAGAA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCATCTCTCGGGCATGTaGGTGGTGGCTGGGGACAGT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEHLSGM*VVAGDS
Trigger: ACTGTCCCCAGCCACCACCCACATGCCCGAGAGATG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGGGACAATGAGCTTTTaGCAGAGGGTTTACTGGATG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSGTMSF*QRVYWM
Trigger: CATCCAGTAAACCCTCTGCCAAAAGCTCATTGTCCC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTCATGCAGGGGTGTCTaGGCAACGGGGTGGTGGAAC +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAESCRGV*ATGWWN
Trigger: GTTCCACCACCCCGTTGCCCAGACACCCCTGCATGA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGAAAAGGGAGACTGGTaGGGGCAGGTATGGCTTCTC +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFEKGDW*GQVWLL
Trigger: GAGAAGCCATACCTGCCCCCACCAGTCTCCCTTTTC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGAGATGGAGTTGGCCTaGGTGCAGAACAGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFEMELA*VQNSRL
Trigger: CAGCCTACTGTTCTGCACCCAGGCCAACTCCATCTC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGAGATGGAGTTGGCCTaGGTGCAGAACAGTAGGCTG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFEMELA*VQNSRL
Trigger: CAGCCTACTGTTCTGCACCCAGGCCAACTCCATCTC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCTGGGGGAGATGGAGTTaGCCTGGGTGCAGAACAGTA +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFWGRWS*PGCRTV
Trigger: TACTGTTCTGCACCCAGGCCAACTCCATCTCCCCCA...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGTTGCTGAGCTGCCTTaGGACTGGGTGACCAAGATC +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFVAELP*DWVTKI
Trigger: GATCTTGGTCACCCAGTCCCAAGGCAGCTCAGCAAC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATCTCAGGTATGGAGTTaGGAAAGCTCTGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTSQVWS*ESSALL
Trigger: GAGCAAAGCAGAGCTTTCCCAACTCCATACCTGAGA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCTCCTGCCTTGGCCCTaGTTGCCTAAGTGGGATTTC +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFLLPWP*LPKWDF
Trigger: GAAATCCCACTTAGGCAACCAGGGCCAAGGCAGGAG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGAGCTCCCTCCTGCCTTaGCCCTGGTTGCCTAAGTGG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAESSLLP*PWLPKW
Trigger: CCACTTAGGCAACCAGGGCCAAGGCAGGAGGGAGCT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGGTTTGCCAGATGGCTaGGGATATTCCTTCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTGLPDG*GYSFKA
Trigger: AGCTTTGAAGGAATATCCCCAGCCATCTGGCAAACC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGTGAGGTTTGCCAGATaGCTGGGGATATTCCTTCAA +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSVRFAR*LGIFLQ
Trigger: TTGAAGGAATATCCCCAGCCATCTGGCAAACCTCAC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGGACCACGGTCTTCTTaGGGACACAGGCTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFGPRSS*GHRLVA
Trigger: AGCTACAAGCCTGTGTCCCCAAGAAGACCGTGGTCC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGACCACGGTCTTCTTaGGGACACAGGCTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGPRSS*GHRLVA
Trigger: AGCTACAAGCCTGTGTCCCCAAGAAGACCGTGGTCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGGAGGCGCAGGTCTCTaGGCTTCTGCTGAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEGGAGL*ASAEEL
Trigger: AAGCTCCTCAGCAGAAGCCCAGAGACCTGCGCCTCC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGGTGCCCCGGTCCCATaGGGTGTCCAGTCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETGAPVP*GVQSGG
Trigger: GCCTCCTGACTGGACACCCCATGGGACCGGGGCACC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTTGTGCCCCTCTGCCTaGGGACACTGGCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAELCPSA*GHWPFC
Trigger: GCAGAAAGGCCAGTGTCCCCAGGCAGAGGGGCACAA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGGCAGATTTCTAACCTaGGCTGAAGCAATGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTGRFLT*AEAMPF
Trigger: AAAGGGCATTGCTTCAGCCCAGGTTAGAAATCTGCC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTACACAGAAGCAGAATTaGTGGAACAGGCTTTCGGGA +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGTQKQN*WNRLSG
Trigger: TCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCATCCGATGACCAAAACTaGAACGCTGTTCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSSDDQN*NAVLSE
Trigger: TTCAGAGAGAACAGCGTTTCAGTTTTGGTCATCGGA...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTTCCGATGACCAAAACTaGAACGCTGTTCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGSDDQN*NAVLSE
Trigger: TTCAGAGAGAACAGCGTTTCAGTTTTGGTCATCGGA...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGCTGCGCCTGGACAGTaGGCTCCGCCTTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETAAPGQ*APPWLH
Trigger: GTGAAGCCAAGGCGGAGCTCACTGTCCAGGCGCAGC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCCGGGGCTGCCAAACTaGCTTTTTGTGGACTCAAAG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFPGLPN*LFVDSK
Trigger: CTTTGAGTCCACAAAAAGTCAGTTTGGCAGCCCCGG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGACTTGGTTCTGCTGGTaGCTTGGTGGACTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAETWFCW*LGGLQG
Trigger: CCCCTGGAGTCCACCAAGTCACCAGCAGAACCAAGT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCTCCAAGGAGGGCACTaGTTTACTTGGTTCTGCTGG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFLQGGH*FTWFCW
Trigger: CCAGCAGAACCAAGTAAATCAGTGCCCTCCTTGGAG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATAGCTGGTGTGCTGGATaGCAGAAATTTCTTTGGACG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDSWCAG*QKFLWT
Trigger: CGTCCAAAGAAATTTCTGTCATCCAGCACACCAGCT...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTGTGTCAGATGGATCTaGGGACAGGCTGGACAGCAT +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFCVRWI*GQAGQH
Trigger: ATGCTGTCCAGCCTGTCCTCAGATCCATCTGACACA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGTACATACTCTTCGTTTaGTTTGTACCCTCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWYILFV*FVPSFE
Trigger: TTCGAAGGAGGGTACAAATCAAACGAAGAGTATGTA...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGTGAGAGGAGACAGCTaGAGTCTTGGAGACCCACAA +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFVRGDS*SLGDPQ
Trigger: TTGTGGGTCTCCAAGACTTCAGCTGTCTCCTCTCAC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGCAAAGGAGAATGAGTaGACAAGGTGGTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFAKENE*TRWSGC
Trigger: GCAGCCAGACCACCTTGTTCACTCATTCTCCTTTGC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAATTTCTAACCTGGGCTaGAGCAATGCCCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTISNLG*SNALYA
Trigger: TGCATAAAGGGCATTGCTTCAGCCCAGGTTAGAAAT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACAGAAGCATCCCTCTTaGATTCGTGCTGCTGAAAAA +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTQKHPS*IRAAEK
Trigger: TTTTTCAGCAGCACGAATTCAAGAGGGATGCTTCTG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS-3UTR GCA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCTTGTATACACACATATaGACACGGAATAGCCATGTA +
Preference number: 4 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPLYTHI*TRNSHV
Trigger: TACATGGCTATTCCGTGTGCATATGTGTGTATACAA...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000372583.6
ENST00000372584.5
CDS-3UTR GCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAATGTCCATCCAGGCATaGATGCGTGTTTGTATACAC +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSMSIQA*MRVCIH
Trigger: GTGTATACAAACACGCATGCATGCCTGGATGGACAT...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372583.6
ENST00000372584.5
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGATGGGGTCAACCAGTTaGCATGTGGACCCCTCCAGG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEMGSTS*HVDPSR
Trigger: CCTGGAGGGGTCCACATGGCAACTGGTTGACCCCAT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGGCTCAGAAACGCCTaGTCATCGATCACCTTCTTC +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGLRNA*SSITFF
Trigger: GAAGAAGGTGATCGATGAGCAGGCGTTTCTGAGCCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTATGTGCTCGATCACCTaGGTCCGGGGTACAGACAAA +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFMCSIT*VRGTDK
Trigger: TTTGTCTGTACCCCGGACGCAGGTGATCGAGCACAT...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGAGGCTGTGTCTTTGCTaGTTGGGCCAGGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAERLCLC*LGQAPQ
Trigger: CTGAGGAGCCTGGCCCAAGCAGCAAAGACACAGCCT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGTCAAAGGAGCTGGTGTaGTGGATGACAGAAATTTCT +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVSKELV*WMTEIS
Trigger: AGAAATTTCTGTCATCCAGCACACCAGCTCCTTTGA...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTACCAGGGAGCTGAAGTaGAAACTGGGATTGCAGAGG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFTRELK*KLGLQR
Trigger: CCTCTGCAATCCCAGTTTGCACTTCAGCTCCCTGGT...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCAAGGGTGGTGTACATTaGGCTCCCATAGGACGGCAT +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFKGGVH*APIGRH
Trigger: ATGCCGTCCTATGGGAGCGCAATGTACACCACCCTT...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATTGTGTTTCTTCAGCATaGTGGGCTTCTTGCAGCGAA +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDCVSSA*WASCSE
Trigger: TTCGCTGCAAGAAGCCCAGCATGCTGAAGAAACACA...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCAAAGTGACAGTGCTTaGACACATAGGGCCGGACGT +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFQSDSA*THRAGR
Trigger: ACGTCCGGCCCTATGTGTGCAAGCACTGTCACTTTG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGTGTTTGTGCCCCTCTaGCTGGGGACACTGGCCTTT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEVFVPL*LGTLAF
Trigger: AAAGGCCAGTGTCCCCAGGCAGAGGGGCACAAACAC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCTGGCTCACACTGATTaGTTTGGAGAATTCCAACGA +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGLAHTD*FGEFQR
Trigger: TCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGTGAGATTCTATTTGTaGATTTACCCCCATCATTTA +
Preference number: 4 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTVRFYL*IYPHHL
Trigger: TAAATGATGGGGGTAAATGCACAAATAGAATCTCAC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCGTAGCAGGCATCTGTaGCAAGTCAGCCACTGCCTC +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAERSRHL*QVSHCL
Trigger: GAGGCAGTGGCTGACTTGGCACAGATGCCTGCTACG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCATTGGTCAAGAGCTGTaGGAGCCAAACCCAAGACGG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFIGQEL*EPNPRR
Trigger: CCGTCTTGGGTTTGGCTCCCACAGCTCTTGACCAAT...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGAGAGAAGGGGCTGCTTaGGTCTTGGGGAGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEREGAA*VLGRAL
Trigger: CAGAGCTCTCCCCAAGACCCAAGCAGCCCCTTCTCT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGAGGTGGCTGTCAGCATaGCGGTCCGCTGTCCTATTC +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAERWLSA*RSAVLF
Trigger: GAATAGGACAGCGGACCGCCATGCTGACAGCCACCT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGTGATTGTTCAGGCTTaGTTTTCTCACTGTGGGATG +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSVIVQA*FSHCGM
Trigger: CATCCCACAGTGAGAAAACCAAGCCTGAACAATCAC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGTACTGGGCGGGTGCTaGAGGCTCAGCAGTGATTGT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEVLGGC*RLSSDC
Trigger: ACAATCACTGCTGAGCCTCCAGCACCCGCCCAGTAC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTGCAGAACAGTAGGCTaGAGAGGAAGCGGTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAECRTVG*RGSGGA
Trigger: AGCCCCACCGCTTCCTCTCCAGCCTACTGTTCTGCA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTACTTCCTGTTGCCAGTaGGGCCAGGCTGGTTTTGAT +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFTSCCQ*GQAGFD
Trigger: ATCAAAACCAGCCTGGCCCCACTGGCAACAGGAAGT...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGGGTTCCTCAAACTTaGGAAGTGCCACAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGVPQT*EVPQLL
Trigger: CAGCAACTGTGGCACTTCCCAAGTTTGAGGAACCCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGTGACTTGGCTGGTCTaGAGGACGTTTCTGACAGAG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFVTWLV*RTFLTE
Trigger: CTCTGTCAGAAACGTCCTCCAGACCAGCCAAGTCAC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGTTTCTTCAGCATGCTaGGCTTCTTGCAGCGAATTC +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDVSSAC*ASCSEF
Trigger: GAATTCGCTGCAAGAAGCCCAGCATGCTGAAGAAAC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGAACAGGTCGTCACTaGTTCCTTCTTCGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGTGRH*FLLRLP
Trigger: TGGAAGCCGAAGAAGGAACCAGTGACGACCTGTTCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGGAAGGTACAACAGATaGGGCCGTGAGAGCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEGRYNR*GRESSW
Trigger: CCAGGAGCTCTCACGGCCCCATCTGTTGTACCTTCC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGTTCTGCCTTTGTGGGTaGTTTGGTGGTTTTAGAACA +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVFCLCG*FGGFRT
Trigger: TGTTCTAAAACCACCAAACCACCCACAAAGGCAGAA...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTAGAATCTGTGGTGGCTaGGTGAAGTATCAAACACCA +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGRICGG*VKYQTP
Trigger: TGGTGTTTGATACTTCACCCAGCCACCACAGATTCT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGGTCAAAAGAATCTGTaGTGGCTGGGTGAAGTATCA +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTGQKNL*WLGEVS
Trigger: TGATACTTCACCCAGCCACCACAGATTCTTTTGACC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTAGGCTGGACTGTGGCTaGTTTGTCTGTCTAGTAGGG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFRLDCG*FVCLVG
Trigger: CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCT...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCACTGTCCAGCAATATaGACAGTGTGGTCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFHCPAI*TVWSRL
Trigger: CAGCCTGGACCACACTGTCCATATTGCTGGACAGTG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCTTGGTTCTGTCCCTCTaGGCACGGCATCAATGTGGA +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFLVLSL*ARHQCG
Trigger: TCCACATTGATGCCGTGCCCAGAGGGACAGAACCAA...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGGGGCTAGAGGAATCTaGAAGCTAATTCTTTTAGGC +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSGARGI*KLILLG
Trigger: GCCTAAAAGAATTAGCTTCCAGATTCCTCTAGCCCC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CAA 72 bp TGGAAAGCAGACTGGATTCACAACACAGAAGCAGAATaGGTGGAACAGGCTTTCGGGAACTTTCTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: WKADWIHNTEAE*VEQAFGNFLPL
Trigger: CAGGGGAAGAAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTCTGCTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATAATAGCCATGTACATTaGAGCACCAAACTAGGCAGC +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDNSHVH*STKLGS
Trigger: GCTGCCTAGTTTGGTGCTTCAATGTACATGGCTATT...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372583.6
ENST00000372584.5
CDS-3UTR TCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCCTTCTTGGTGCCCTTaGCACTTTGTTCAGGATCCA +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFPSWCP*HFVQDP
Trigger: TGGATCCTGAACAAAGTGTCAAGGGCACCAAGAAGG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGAAGAAACACTGGTCTaGATGGCCTCTCCTTTGGTC +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFEETLV*MASPLV
Trigger: GACCAAAGGAGAGGCCATTCAGACCAGTGTTTCTTC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCTGGAGGCTCAGCAGTaGTTGTTCAGGCTTGGTTTT +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFLEAQQ*LFRLGF
Trigger: AAAACCAAGCCTGAACAATCACTGCTGAGCCTCCAG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGGTGGTGACTCGGCCTaGCCTGGAGACCATCTCCTG +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETGGDSA*PGDHLL
Trigger: CAGGAGATGGTCTCCAGGTCAGGCCGAGTCACCACC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTCTCTGGGCTTCTGCTaGGGAGCTTGTGAGGTAGAG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAESLGFC*GACEVE
Trigger: CTCTACCTCACAAGCTCCTCAGCAGAAGCCCAGAGA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAAATAAACAGGAACCTTaGTCGCATCTGTACACAGGA +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTNKQEP*SHLYTG
Trigger: TCCTGTGTACAGATGCGATCAAGGTTCCTGTTTATT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGAGGCAACAGGAGAGTaGGGCCTCGGTCAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETEATGE*GLGQGL
Trigger: AAGCCCCTGACCGAGGCCTCACTCTCCTGTTGCCTC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCTCTGTGGTGGCTGGGTaGAGTATCAAACACCATCCT +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFSVVAG*SIKHHP
Trigger: AGGATGGTGTTTGATACTTCACCCAGCCACCACAGA...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGAGAAATAGTCTCCAGTaGCTCCTGGCCCCTGTGGCT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAERNSLQ*LLAPVA
Trigger: AGCCACAGGGGCCAGGAGTCACTGGAGACTATTTCT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGGGACTCCATGCTGCTaGGCCTGGACAGTGAGCTCC +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETGTPCC*AWTVSS
Trigger: GGAGCTCACTGTCCAGGCGCAGCAGCATGGAGTCCC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGATTTTGGGGACTCCATaGTGCTGCGCCTGGACAGTG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEILGTP*CCAWTV
Trigger: CACTGTCCAGGCGCAGCAGCATGGAGTCCCCAAAAT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGCGGTACTGGGCGGGTaGTGGAGGCTCAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETAVLGG*WRLSSD
Trigger: ATCACTGCTGAGCCTCCAGCACCCGCCCAGTACCGC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTAGTCAAAGGATTTGCTaGGTGTCTCGGTCATGTGGG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFSQRIC*VSRSCG
Trigger: CCCACATGACCGAGACACGCAGCAAATCCTTTGACT...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGGTTGTACAAACTTATaGACCAACCAGCGTAAACAG +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGGCTNL*TNQRKQ
Trigger: CTGTTTACGCTGGTTGGTGCATAAGTTTGTACAACC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGCCTTCGACTTCATGTaGTTAGTCAGATTCCCTTTG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDAFDFM*LVRFPL
Trigger: CAAAGGGAATCTGACTAAGCACATGAAGTCGAAGGC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTAAAGGCACAGGTAACTaGATACATGGGAAGGTACAA +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGKGTGN*IHGKVQ
Trigger: TTGTACCTTCCCATGTATGCAGTTACCTGTGCCTTT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACCTCCTCCTTCTACCTaGACCTATTATTTTGTGTTG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTPPPST*TYYFVL
Trigger: CAACACAAAATAATAGGTGCAGGTAGAAGGAGGAGG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCACTCCCAGGGAGCCCTaGCTTCTGTCTCATTTTTGT +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFTPREP*LLSHFC
Trigger: ACAAAAATGAGACAGAAGGCAGGGCTCCCTGGGAGT...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGTGAGATTCTATTTGTaGATTTACCCCCATCATTTA +
Preference number: 4 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGVRFYL*IYPHHL
Trigger: TAAATGATGGGGGTAAATGCACAAATAGAATCTCAC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATCCAGCTCAGATGTATTaGTCATTCCTCTTCAGAAGG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDPAQMY*SFLFRR
Trigger: CCTTCTGAAGAGGAATGAGCAATACATCTGAGCTGG...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTACCAACATTGCAAGATaGAAGTGTGGAAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGTNIAR*KCGNWS
Trigger: ACTCCAGTTTCCACACTTGCATCTTGCAATGTTGGT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGAGACATCTGTGTCCATaGCCCAGTCATCCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAERHLCP*PSHPWS
Trigger: GGACCAGGGATGACTGGGCCATGGACACAGATGTCT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGGAAGCTGTGAGATGTaGACGGATGCTTCGATGGGG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEGSCEM*TDASMG
Trigger: CCCCATCGAAGCATCCGTCCACATCTCACAGCTTCC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGAGGGTCCAGGTCTCATaGGGTCAACCAGTTGCCATG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAERVQVS*GQPVAM
Trigger: CATGGCAACTGGTTGACCCCATGAGACCTGGACCCT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATTCTGCTTAATCGTGTaGGTGTCTTCAGGTTTATGG +
Preference number: 4 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTFCLIV*VSSGLW
Trigger: CCATAAACCTGAAGACACCCACACGATTAAGCAGAA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCCTCCTCTTCCTCAGTaGAGTGAGTTCCAGGGTGGT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEPPLPQ*SEFQGG
Trigger: ACCACCCTGGAACTCACTCCACTGAGGAAGAGGAGG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGCATTTTCTTCTCTCTaGCGGGGCCACCCGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETAFSSL*RGHPRW
Trigger: CCAGCGCGGGTGGCCCCGCCAGAGAGAAGAAAATGC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTGGGCAACGGGGTGGTaGAACACTTGCAGTGCTTCT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEWATGW*NTCSAS
Trigger: AGAAGCACTGCAAGTGTTCCACCACCCCGTTGCCCA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGAGCTGCCTTGGGACTaGGTGACCAAGATCTGGGAA +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEELPWD*VTKIWE
Trigger: TTCCCAGATCTTGGTCACCCAGTCCCAAGGCAGCTC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCTAGCTAGATCTTTCTaGCCTTCCGGGGAAACCAGT +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFLARSF*PSGETS
Trigger: ACTGGTTTCCCCGGAAGGCCAGAAAGATCTAGCTAG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGGACCACGGTCTTCTTaGGGACACAGGCTTGTAGCT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEGPRSS*GHRLVA
Trigger: AGCTACAAGCCTGTGTCCCCAAGAAGACCGTGGTCC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGCCAGGATGTGGCCGTaGAAGTCATGGAGGGCGGAG +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETARMWP*KSWRAE
Trigger: CTCCGCCCTCCATGACTTCCACGGCCACATCCTGGC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCTCTGTTGCTGGACACTaGAAGCCAGATGCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFSVAGH*KPDAEA
Trigger: TGCTTCAGCATCTGGCTTCCAGTGTCCAGCAACAGA...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATATGATTCGAGGAAAGTaGCTGGAAACGTCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDMIRGK*LETSVA
Trigger: AGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTTTCTGCCTTTGTGGGTaGTTTGGTGGTTTTAGAACA +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGFCLCG*FGGFRT
Trigger: TGTTCTAAAACCACCAAACCACCCACAAAGGCAGAA...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCATATACCCAGGCTGGTaGCATTGGTTCTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFIYPGW*HWFCPS
Trigger: AGAGGGACAGAACCAATGCCACCAGCCTGGGTATAT...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCCAGCCGTGGTCTCATaGTCAAGATGTGTCAGAGAT +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFPAVVS*SRCVRD
Trigger: ATCTCTGACACATCTTGACCATGAGACCACGGCTGG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS-3UTR TCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTGGCCCGTTTTCTCCTaGGAGCCTTCCCTAAGAACT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEWPVFS*EPSLRT
Trigger: AGTTCTTAGGGAAGGCTCTCAGGAGAAAACGGGCCA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCAGCTGGTGTGCTGGATaGCAGAAATTTCTTTGGACG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFSWCAG*QKFLWT
Trigger: CGTCCAAAGAAATTTCTGTCATCCAGCACACCAGCT...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGAGAGGGTTTACTGGATaGGGGCTGTGGTTCTTCGCT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAERGFTG*GLWFFA
Trigger: AGCGAAGAACCACAGCCCTCATCCAGTAAACCCTCT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTTACATACTCTTCGTTTaGTTTGTACCCTCCTTCGAA +
Preference number: 4 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGYILFV*FVPSFE
Trigger: TTCGAAGGAGGGTACAAATCAAACGAAGAGTATGTA...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGGCAAGGTTTGGCTCTaGAACCTCGACCAGTTGGTT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEGKVWL*NLDQLV
Trigger: AACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCACACACATCAATACTaGGCATTTTTCCTTTTGTAC +
Preference number: 4 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVHTHQY*AFFLLY
Trigger: GTACAAAAGGAAAAATGCTCAGTATTGATGTGTGTG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCGCACCAGCACTTTCTaGCTGAATGTCTGTCGGGAA +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAERTSTF*LNVCRE
Trigger: TTCCCGACAGACATTCAGGCAGAAAGTGCTGGTGCG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTTATGGCTCAGGGGGTaGTCAGATGAGGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAELWLRG*SDEGST
Trigger: TGTGGAACCCTCATCTGAGCACCCCCTGAGCCATAA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCCATCCCAGTGCGGTTaGTGTACATATCTACAGTAC +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFPSQCG*CTYLQY
Trigger: GTACTGTAGATATGTACAGCAACCGCACTGGGATGG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGTACGTCAGACTCTGTaGTTTAGACCTGCGTGGATT +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFVRQTL*FRPAWI
Trigger: AATCCACGCAGGTCTAAAGCACAGAGTCTGACGTAC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCTCTATTGGTGAGGCATaGCCCTCTACTTTGCAGACA +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFSIGEA*PSTLQT
Trigger: TGTCTGCAAAGTAGAGGGCCATGCCTCACCAATAGA...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTTGGGCTGTGCTGGACTaGGACAGGGAACAGCGTTCG +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETWAVLD*DREQRS
Trigger: CGAACGCTGTTCCCTGTCCCAGTCCAGCACAGCCCA...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATTTCTGCTTAATCGTGTaGGTGTCTTCAGGTTTATGG +
Preference number: 4 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDFCLIV*VSSGLW
Trigger: CCATAAACCTGAAGACACCCACACGATTAAGCAGAA...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGACTCCCCTGATGATTaGGCCATCTCTGCCAGGCGC +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETDSPDD*AISARR
Trigger: GCGCCTGGCAGAGATGGCCCAATCATCAGGGGAGTC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCTGGGTGACCAAGATCTaGGAAAGGGTGGTGTACATT +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFWVTKI*ERVVYI
Trigger: AATGTACACCACCCTTTCCCAGATCTTGGTCACCCA...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTACCTTCTTGTGACTTaGCTGGTCTGGAGGACGTTT +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFYLLVT*LVWRTF
Trigger: AAACGTCCTCCAGACCAGCCAAGTCACAAGAAGGTA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGCGGAGCTGTGGCCATaGTGTATGTCTCTTTGCTCA +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEAELWP*CMSLCS
Trigger: TGAGCAAAGAGACATACACCATGGCCACAGCTCCGC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGTTTCTTCAGCATGCTaGGCTTCTTGCAGCGAATTC +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFVSSAC*ASCSEF
Trigger: GAATTCGCTGCAAGAAGCCCAGCATGCTGAAGAAAC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGAGATGAGTCGTTTTTaGTTAGCGAGTGTTTGCGGG +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFEMSRF*LASVCG
Trigger: CCCGCAAACACTCGCTAACCAAAAACGACTCATCTC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGAGACAGCTGAAGTCTTaGAGACCCACAAGGGAGAGC +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAERQLKS*RPTRES
Trigger: GCTCTCCCTTGTGGGTCTCCAAGACTTCAGCTGTCT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGGAGGCCTGGGTCGGTaGTACCCTCGAGTTTGGAGA +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETGGLGR*YPRVWR
Trigger: TCTCCAAACTCGAGGGTACCACCGACCCAGGCCTCC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGGGGAAACGGTCCTGTaGCAAAGTGGTCCTGAAACA +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEGETVL*QSGPET
Trigger: TGTTTCAGGACCACTTTGCCACAGGACCGTTTCCCC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCAGAAGCAGAATTGGTaGAACAGGCTTTCGGGAACT +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFQKQNW*NRLSGT
Trigger: AGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTACTTGGTTCTGCTGGTaGCTTGGTGGACTCCAGGGG +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETTWFCW*LGGLQG
Trigger: CCCCTGGAGTCCACCAAGTCACCAGCAGAACCAAGT...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTAAGTGCCACAGTTGCTaGGCTGCCTTGGGACTGGGT +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETKCHSC*AALGLG
Trigger: ACCCAGTCCCAAGGCAGCTCAGCAACTGTGGCACTT...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTACAGTCGTCCCCTTTaGTGGGGGTTCCTCAAACTT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEYSRPL*WGFLKL
Trigger: AAGTTTGAGGAACCCCCATCAAAGGGGACGACTGTA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCATTTCTAACCTGGGCTaGAGCAATGCCCTTTATGCA +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFISNLG*SNALYA
Trigger: TGCATAAAGGGCATTGCTTCAGCCCAGGTTAGAAAT...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTCCAAGCCACTCGGCTaGTCGAGAGAATCAGATTTC +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAESKPLG*SRESDF
Trigger: GAAATCTGATTCTCTCGAGCAGCCGAGTGGCTTGGA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGAGTTGGGAAAGCTCTaGTTTGCTCTTCACTTAACC +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFELGKL*FALHLT
Trigger: GGTTAAGTGAAGAGCAAAGCAGAGCTTTCCCAACTC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGTGAAAGGACACGTTTaGTTCCCCCTGCTGTTGATG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEVKGHV*FPLLLM
Trigger: CATCAACAGCAGGGGGAAGCAAACGTGTCCTTTCAC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTTGCCAAGTCAGCCACTaGCTCCTCTGCTGCTTCCCT +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETCQVSH*LLCCFP
Trigger: AGGGAAGCAGCAGAGGAGGCAGTGGCTGACTTGGCA...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGCCGCTGCCTGGGTATaGGACGCTGGAAGAAACACT +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETAAAWV*DAGRNT
Trigger: AGTGTTTCTTCCAGCGTCCCATACCCAGGCAGCGGC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGAGCGAATGTGCTTCTaGAGCACGCTGGGCTTGGCA +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETERMCF*STLGLA
Trigger: TGCCAAGCCCAGCGTGCTCCAGAAGCACATTCGCTC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGACTCTTTTCAGCTTCTaGAGATGTGTGGGTGCCTGC +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAETLFSF*RCVGAC
Trigger: GCAGGCACCCACACATCTCCAGAAGCTGAAAAGAGT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCATAGGACGGCATATTaGTCTGAACACGGACAGGCA +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEHRTAY*SEHGQA
Trigger: TGCCTGTCCGTGTTCAGACCAATATGCCGTCCTATG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGACATTAGTGGTTGTGTaGAGGCTGGGGAACTGCAGT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAETLVVV*RLGNCS
Trigger: ACTGCAGTTCCCCAGCCTCCACACAACCACTAATGT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTCTGTTGCTGGACACTaGAAGCCAGATGCTGAAGCA +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAESVAGH*KPDAEA
Trigger: TGCTTCAGCATCTGGCTTCCAGTGTCCAGCAACAGA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTAGAATCTGTGGTGGCTaGGTGAAGTATCAAACACCA +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFRICGG*VKYQTP
Trigger: TGGTGTTTGATACTTCACCCAGCCACCACAGATTCT...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCTGCTCTGTATAGGGTaGCATCAAACCCAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAELLCIG*HQTQPS
Trigger: TGAAGGCTGGGTTTGATGCCACCCTATACAGAGCAG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGACGCTATTCTATTGGTaGGGCATGGCCCTCTACTTT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAETLFYW*GMALYF
Trigger: AAAGTAGAGGGCCATGCCTCACCAATAGAATAGCGT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCTTTGTTCAGGATCCATaGCCTTCACAAAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: RHWLTLIALENSNELGQFFVQDP*PSQRLQ
Trigger: CTGAAGTCTTTGTGAAGGTCATGGATCCTGAACAAA...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGGCTCATGCTCAATCTaGCTCTTTTCAGCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEGSCSI*LFSASG
Trigger: TCCAGAAGCTGAAAAGAGTCAGATTGAGCATGAGCC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTAAGGCTGCCAGCTGGTaGAAGGACACGTTTGCTTCC +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETKAASW*KDTFAS
Trigger: GGAAGCAAACGTGTCCTTTCACCAGCTGGCAGCCTT...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGCTGAGGAAGTGGGATaGTTCGAGGAAAGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETAEEVG*FEESGW
Trigger: CCAGCCACTTTCCTCGAATCATCCCACTTCCTCAGC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTCGGAGGGCCAGCTTCTaGTTAATCGTGTGGGTGTCT +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETRRASF*LIVWVS
Trigger: AGACACCCACACGATTAAGCAGAAGCTGGCCCTCCG...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTATGAGCTTCGTGATGTaGTCGATCACCTGCGTCCGG +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETMSFVM*SITCVR
Trigger: CCGGACGCAGGTGATCGAGCACATCACGAAGCTCAT...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTAGGTATGGCTTCTCATaGAGGGGTGTCTGGGCAACG +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETRYGFS*RGVWAT
Trigger: CGTTGCCCAGACACCCCTGCATGAGAAGCCATACCT...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGTGAGATTCTATTTGTaGATTTACCCCCATCATTTA +
Preference number: 4 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSVRFYL*IYPHHL
Trigger: TAAATGATGGGGGTAAATGCACAAATAGAATCTCAC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTCACTGCCTCCTCTGCTaGTTCCCTCAACAGGCACAA +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETHCLLC*FPQQAQ
Trigger: TTGTGCCTGTTGAGGGAAGCAGCAGAGGAGGCAGTG...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGTCCCCAAGGACAGGTaGTCAGCCAGGACTTTTGCT +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETVPKDR*SARTFA
Trigger: AGCAAAAGTCCTGGCTGAGCACCTGTCCTTGGGGAC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGTACGTCAGACTCTGTaGTTTAGACCTGCGTGGATT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEVRQTL*FRPAWI
Trigger: AATCCACGCAGGTCTAAAGCACAGAGTCTGACGTAC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGTCACTGGCTGTGAGTaGACTCGGAGCAGGTCATCA +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETVTGCE*TRSRSS
Trigger: TGATGACCTGCTCCGAGTCCACTCACAGCCAGTGAC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTCAGCTTTGGCCACATTaGTCAAGAGCTGTGGGAGCC +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETQLWPH*SRAVGA
Trigger: GGCTCCCACAGCTCTTGACCAATGTGGCCAAAGCTG...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGCAGATGTACTTGCCTaGCTTCTGGGGCTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETADVLA*LLGLPL
Trigger: GAGAGGAAGCCCCAGAAGCCAGGCAAGTACATCTGC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGGGACAATGAGCTTTTaGCAGAGGGTTTACTGGATG +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEGTMSF*QRVYWM
Trigger: CATCCAGTAAACCCTCTGCCAAAAGCTCATTGTCCC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGTTGCTGAGCTGCCTTaGGACTGGGTGACCAAGATC +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETVAELP*DWVTKI
Trigger: GATCTTGGTCACCCAGTCCCAAGGCAGCTCAGCAAC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTCTCAGGTATGGAGTTaGGAAAGCTCTGCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAESQVWS*ESSALL
Trigger: GAGCAAAGCAGAGCTTTCCCAACTCCATACCTGAGA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGCCTGCTTCTTTGCTTaGGGACCACGGTCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETACFFA*GPRSSW
Trigger: CCAAGAAGACCGTGGTCCCCAAGCAAAGAAGCAGGC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGGCAGATTTCTAACCTaGGCTGAAGCAATGCCCTTT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEGRFLT*AEAMPF
Trigger: AAAGGGCATTGCTTCAGCCCAGGTTAGAAATCTGCC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCAGAAGCAGAATTGGTaGAACAGGCTTTCGGGAACT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEQKQNW*NRLSGT
Trigger: AGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTACTCAGTACTCCCTTTaGTGCCTGGGCTCAGAAACG +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETTQYSL*CLGSET
Trigger: CGTTTCTGAGCCCAGGCAGCAAAGGGAGTACTGAGT...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTACAAAGTAGAGTTTTaGCCCAGGAAATGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEYKVEF*PRKCRA
Trigger: TGCCCTGCATTTCCTGGGGCAAAACTCTACTTTGTA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTTGTTCATTGCTAGGCTaGCCAGGGAGGAAACCTTGG +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETCSLLG*PGRKPW
Trigger: CCAAGGTTTCCTCCCTGGGCAGCCTAGCAATGAACA...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTTCCAGAGCCAACCCATaGCTCGCTTGTCTTTTCCAC +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETSRANP*LACLFH
Trigger: GTGGAAAAGACAAGCGAGGCATGGGTTGGCTCTGGA...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGCAGAAGGCATTGAGTaGCTTCTCAGGAGAGGCACA +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETAEGIE*LLRRGT
Trigger: TGTGCCTCTCCTGAGAAGCCACTCAATGCCTTCTGC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTTTTCTTCACGCTCAGTaGGGTCAACCCTCTTCGGTG +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETFLHAQ*GQPSSV
Trigger: CACCGAAGAGGGTTGACCCCACTGAGCGTGAAGAAA...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTCAGGATGCGGAGCTGTaGCCATGGTGTATGTCTCTT +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETQDAEL*PWCMSL
Trigger: AAGAGACATACACCATGGCCACAGCTCCGCATCCTG...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGACATATACCCAGGCTaGTGGCATTGGTTCTGTCCC +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETDIYPG*WHWFCP
Trigger: GGGACAGAACCAATGCCACCAGCCTGGGTATATGTC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGGGGCTAGAGGAATCTaGAAGCTAATTCTTTTAGGC +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEGARGI*KLILLG
Trigger: GCCTAAAAGAATTAGCTTCCAGATTCCTCTAGCCCC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
3UTR CAA 72 bp TGGGTAAGGAAGAGGCACTGGCTCACACTGATTGCTTaGGAGAATTCCAACGAGTTAGGACAATTCAAAAAT +
Preference number: 4 (lower is better)
Translates to: WVRKRHWLTLIA*ENSNELGQFKN
Trigger: ATTTTTGAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCTCTTCCTTACCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTAGGCACCACTTCCGATaGCCAAAACTGAAACGCTGT +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETRHHFR*PKLKRC
Trigger: ACAGCGTTTCAGTTTTGGTCATCGGAAGTGGTGCCT...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGGCACTGGCTCACACTaGTTGCTTTGGAGAATTCCA +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETGTGSH*LLWRIP
Trigger: TGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTTGTATACACACATATaGACACGGAATAGCCATGTA +
Preference number: 4 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFLYTHI*TRNSHV
Trigger: TACATGGCTATTCCGTGTGCATATGTGTGTATACAA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000372583.6
ENST00000372584.5
CDS-3UTR GCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGACCAACATTGCAAGATaGAAGTGTGGAAACTGGAGT +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAETNIAR*KCGNWS
Trigger: ACTCCAGTTTCCACACTTGCATCTTGCAATGTTGGT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGGAGATCAACGGCCTTaGAGGAGAAATCACGCTCTT +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETGDQRP*RRNHAL
Trigger: AAGAGCGTGATTTCTCCTCCAAGGCCGTTGATCTCC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTCGCTGGAAGAAACACTaGTCTGAATGGCCTCTCCTT +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETRWKKH*SEWPLL
Trigger: AAGGAGAGGCCATTCAGACCAGTGTTTCTTCCAGCG...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTAGATCTGGGAAAGGGTaGTGTACATTGCGCTCCCAT +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETRSGKG*CTLRSH
Trigger: ATGGGAGCGCAATGTACACCACCCTTTCCCAGATCT...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTAGGCACTCTCAGGTATaGAGTTGGGAAAGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETRHSQV*SWESSA
Trigger: AGCAGAGCTTTCCCAACTCCATACCTGAGAGTGCCT...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCAAAAGAATCTGTGGTaGCTGGGTGAAGTATCAAAC +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEQKNLW*LGEVSN
Trigger: GTTTGATACTTCACCCAGCCACCACAGATTCTTTTG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTCTGCTCTGTATAGGGTaGCATCAAACCCAGCCTTCA +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETLLCIG*HQTQPS
Trigger: TGAAGGCTGGGTTTGATGCCACCCTATACAGAGCAG...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTTCCGATGACCAAAACTaGAACGCTGTTCTCTCTGAA +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETSDDQN*NAVLSE
Trigger: TTCAGAGAGAACAGCGTTTCAGTTTTGGTCATCGGA...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCACACACATCAATACTaGGCATTTTTCCTTTTGTAC +
Preference number: 4 (lower is better)
Translates to: RGIWKLILLGFFQQREAEHTHQY*AFFLLY
Trigger: GTACAAAAGGAAAAATGCTCAGTATTGATGTGTGTG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR GCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTCATAGTCAAAGGATTTaGTGCGTGTCTCGGTCATGT +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETHSQRI*CVSRSC
Trigger: ACATGACCGAGACACGCAGCAAATCCTTTGACTATG...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR TCA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTTTGAATTCGTGCTGCTaGAAAACACGGAATAAATTC +
Preference number: 4 (lower is better)
Translates to: SFALIYTIPTLQDASVETLNSCC*KTRNKF
Trigger: GAATTTATTCCGTGTTTTTCAGCAGCACGAATTCAA...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS CCA 90 bp TTTCATGAACACCTGCGCGCCGGGCCGGGGCGGCGGGAGGCGGCTTaGGATGCCGGGGTGGCGGGCGGCGGGCGGCAGCGCTGGCAGCCA +
Preference number: 5 (lower is better)
Translates to: FHEHLRAGPGRREAA*DAGVAGGGRQRWQP
Trigger: TGGCTGCCAGCGCTGCCGCCCGCCGCCCGCCACCCCGGCATCCCAAGCCGCCTCCCGCCGCCCCGGCCCGGCGCGCAGGTGTTCATGAAA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489103.5
CDS CCA 90 bp TGTGCCTCGAATCCTGCGGGCGGCCGAGGCTCCGCTGCTCTGGGCTaGGCTGCGCCGCGCTGGACTGGGCTGCGCTGGGCTGCGCGCCCG +
Preference number: 5 (lower is better)
Translates to: CASNPAGGRGSAALG*AAPRWTGLRWAARP
Trigger: CGGGCGCGCAGCCCAGCGCAGCCCAGTCCAGCGCGGCGCAGCCCAGCCCAGAGCAGCGGAGCCTCGGCCGCCCGCAGGATTCGAGGCACA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643665.1
CDS CCA 90 bp GGGTTTGTGCCTCGAATCCTGCGGGCGGCCGAGGCTCCGCTGCTCTaGGCTGGGCTGCGCCGCGCTGGACTGGGCTGCGCTGGGCTGCGC +
Preference number: 5 (lower is better)
Translates to: GFVPRILRAAEAPLL*AGLRRAGLGCAGLR
Trigger: GCGCAGCCCAGCGCAGCCCAGTCCAGCGCGGCGCAGCCCAGCCCAGAGCAGCGGAGCCTCGGCCGCCCGCAGGATTCGAGGCACAAACCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000643665.1
CDS GCA 90 bp CCCGGAGAGGTTCCTCGTCCGGGCTGGGAAGCGGGCAGAGGCCTCTaGCAGGCAGCCCACAGAGCTGCTGCGGTCCAGCGGCGGGGTGGC +
Preference number: 5 (lower is better)
Translates to: PGEVPRPGWEAGRGL*QAAHRAAAVQRRGG
Trigger: GCCACCCCGCCGCTGGACCGCAGCAGCTCTGTGGGCTGCCTGGCAGAGGCCTCTGCCCGCTTCCCAGCCCGGACGAGGAACCTCTCCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 90 bp CAGGGGCTGTGCGTGGGTGTGGGCTCTGCAGGTGCCCCGGTCCCATaGGGTGTCCAGTCAGGAGGCCTGCCCGGGCCTCCGCCGGTCCTC +
Preference number: 5 (lower is better)
Translates to: QGLCVGVGSAGAPVP*GVQSGGLPGPPPVL
Trigger: GAGGACCGGCGGAGGCCCGGGCAGGCCTCCTGACTGGACACCCCATGGGACCGGGGCACCTGCAGAGCCCACACCCACGCACAGCCCCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 90 bp ACGGAGGCTGACGAGCTCTCAGTGGGACTCCAGCGGCCTCGCTCCTaGGCCTCCCGGGCCCCTGTCAGGTCGCTGCCACCCCCGGAGAAG +
Preference number: 5 (lower is better)
Translates to: TEADELSVGLQRPRS*ASRAPVRSLPPPEK
Trigger: CTTCTCCGGGGGTGGCAGCGACCTGACAGGGGCCCGGGAGGCCCAGGAGCGAGGCCGCTGGAGTCCCACTGAGAGCTCGTCAGCCTCCGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS GCA 90 bp CCACAGAGCCCAGAGGGGCCGGTCCCAGCCAGGGGAGGCCCGGCATaGTCTGGCTGGACATGGAGCAGCTGCTGGCTGTCAGGCGCTCAG +
Preference number: 5 (lower is better)
Translates to: PQSPEGPVPARGGPA*SGWTWSSCWLSGAQ
Trigger: CTGAGCGCCTGACAGCCAGCAGCTGCTCCATGTCCAGCCAGAGCATGCCGGGCCTCCCCTGGCTGGGACCGGCCCCTCTGGGCTCTGTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 90 bp GGGCCGGTCCCAGCCAGGGGAGGCCCGGCATGCTCTGGCTGGACATaGAGCAGCTGCTGGCTGTCAGGCGCTCAGCTTCCGAGACCGAGC +
Preference number: 5 (lower is better)
Translates to: GPVPARGGPACSGWT*SSCWLSGAQLPRPS
Trigger: GCTCGGTCTCGGAAGCTGAGCGCCTGACAGCCAGCAGCTGCTCCATGTCCAGCCAGAGCATGCCGGGCCTCCCCTGGCTGGGACCGGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 90 bp GAGCCCAGAGGGGCCGGTCCCAGCCAGGGGAGGCCCGGCATGCTCTaGCTGGACATGGAGCAGCTGCTGGCTGTCAGGCGCTCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: EPRGAGPSQGRPGML*LDMEQLLAVRRSAS
Trigger: GGAAGCTGAGCGCCTGACAGCCAGCAGCTGCTCCATGTCCAGCCAGAGCATGCCGGGCCTCCCCTGGCTGGGACCGGCCCCTCTGGGCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS-3UTR CAA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGAGGGGCGGGCTTGCTaGGCCAGGACCCCGCGAGGC +
Preference number: 5 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAEGRAC*ARTPRG
Trigger: GCCTCGCGGGGTCCTGGCCAAGCAAGCCCGCCCCTC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCCTGGCTTGGGAGTCCTaGGCTGGAAGCCCGTGGGTC +
Preference number: 5 (lower is better)
Translates to: PVASLPEPDGPGDCRASALAWES*AGSPWV
Trigger: GACCCACGGGCTTCCAGCCAAGGACTCCCAAGCCAG...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp TGCCACGGGGAGGCGCAGGTCTCTGGGCTTCTGCTGAGGAGCTTGTaGGGTAGAGGCGCGGGCGGGAAGAGAACCCGTGGGTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: CHGEAQVSGLLLRSL*GRGAGGKRTRGSSP
Trigger: GGGGCTGGACCCACGGGTTCTCTTCCCGCCCGCGCCTCTACCTCACAAGCTCCTCAGCAGAAGCCCAGAGACCTGCGCCTCCCCGTGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372583.6
ENST00000460604.1
CDS TCA 90 bp TTCCACGGGGAGGCGCAGGTCTCTGGGCTTCTGCTGAGGAGCTTGTaGGGTAGAGGCGCGGGCGGGAAGAGAACCCGTGGGTCCAGCCCC +
Preference number: 5 (lower is better)
Translates to: FHGEAQVSGLLLRSL*GRGAGGKRTRGSSP
Trigger: GGGGCTGGACCCACGGGTTCTCTTCCCGCCCGCGCCTCTACCTCACAAGCTCCTCAGCAGAAGCCCAGAGACCTGCGCCTCCCCGTGGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp GGGACTCGGCCTTCCACGGGGAGGCGCAGGTCTCTGGGCTTCTGCTaGGGAGCTTGTGAGGTAGAGGCGCGGGCGGGAAGAGAACCCGTG +
Preference number: 5 (lower is better)
Translates to: GTRPSTGRRRSLGFC*GACEVEARAGREPV
Trigger: CACGGGTTCTCTTCCCGCCCGCGCCTCTACCTCACAAGCTCCTCAGCAGAAGCCCAGAGACCTGCGCCTCCCCGTGGAAGGCCGAGTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp CCCGGGAAGGGCTGCGGGGCTAAGAGCTCTTGGGCGGGGCTCTCTTaGGTGGCAGCTGTGCCGCTGCCTGGGTATGGGACGCTGGAAGAA +
Preference number: 5 (lower is better)
Translates to: PGKGCGAKSSWAGLS*VAAVPLPGYGTLEE
Trigger: TTCTTCCAGCGTCCCATACCCAGGCAGCGGCACAGCTGCCACCCAAGAGAGCCCCGCCCAAGAGCTCTTAGCCCCGCAGCCCTTCCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp GGAGTCTGCCCGCAGTGCATGTGGTGGGCCAGGCGGGGGCGCCTCTaGGGATGGTCTGGACAGCTCATCCTGGCTCTCCTCCTCATCCTC +
Preference number: 5 (lower is better)
Translates to: GVCPQCMWWARRGRL*GWSGQLILALLLIL
Trigger: GAGGATGAGGAGGAGAGCCAGGATGAGCTGTCCAGACCATCCTCAGAGGCGCCCCCGCCTGGCCCACCACATGCACTGCGGGCAGACTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS TCA 90 bp AAGGCCCACTTCCCTGGCGGCGCTGACCGTGGTGGTGACTCGGCCTaGCCTGGAGACCATCTCCTGGTGGGCGAGTATCTGGGGAGGCCT +
Preference number: 5 (lower is better)
Translates to: KAHFPGGADRGGDSA*PGDHLLVGEYLGRP
Trigger: AGGCCTCCCCAGATACTCGCCCACCAGGAGATGGTCTCCAGGTCAGGCCGAGTCACCACCACGGTCAGCGCCGCCAGGGAAGTGGGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS TCA 90 bp ACTCGGCCTTCTGCCACGGGGAGGCGCAGGTCTCTGGGCTTCTGCTaGGGAGCTTGTGAGGTAGAGGCGCGGGCGGGAAGAGAACCCGTG +
Preference number: 5 (lower is better)
Translates to: TRPSATGRRRSLGFC*GACEVEARAGREPV
Trigger: CACGGGTTCTCTTCCCGCCCGCGCCTCTACCTCACAAGCTCCTCAGCAGAAGCCCAGAGACCTGCGCCTCCCCGTGGCAGAAGGCCGAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000372583.6
ENST00000460604.1
CDS TCA 90 bp GGCTTGCTTGGCCAGGACCCCGCGAGGCTCCTCCATGAACTAGGTTaGGGCTGCTGGGTTTGTGCCTCGAATCCTGCGGGCGGCCGAGGC +
Preference number: 5 (lower is better)
Translates to: GLLGQDPARLLHELG*GCWVCASNPAGGRG
Trigger: GCCTCGGCCGCCCGCAGGATTCGAGGCACAAACCCAGCAGCCTCAACCTAGTTCATGGAGGAGCCTCGCGGGGTCCTGGCCAAGCAAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643665.1
CDS CCA 90 bp GCGCTGACCGTGGTGGTGACTCGGCCTGACCTGGAGACCATCTCCTaGTGGGCGAGTATCTGGGGAGGCCTGGGTCGGTGGTACCCTCGA +
Preference number: 5 (lower is better)
Translates to: ALTVVVTRPDLETIS*WASIWGGLGRWYPR
Trigger: TCGAGGGTACCACCGACCCAGGCCTCCCCAGATACTCGCCCACCAGGAGATGGTCTCCAGGTCAGGCCGAGTCACCACCACGGTCAGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCTTGGTTAGCGAGTGTTaGCGGGCTAGTGGTGGACGG +
Preference number: 5 (lower is better)
Translates to: PVASLPEPDGPGDCRASALVSEC*RASGGR
Trigger: CCGTCCACCACTAGCCCGCAAACACTCGCTAACCAA...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp CAGAGGGGCGGGCTTGCTTGGCCAGGACCCCGCGAGGCTCCTCCATaGACTAGGTTGAGGCTGCTGGGTTTGTGCCTCGAATCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: QRGGLAWPGPREAPP*TRLRLLGLCLESCG
Trigger: CCCGCAGGATTCGAGGCACAAACCCAGCAGCCTCAACCTAGTTCATGGAGGAGCCTCGCGGGGTCCTGGCCAAGCAAGCCCGCCCCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000643665.1
CDS GCA 90 bp GAGGAGACAGCTGAAGTCTTGGAGACCCACAAGGGAGAGCGCCCATaGCCCTTCCTGGGTCCACGTGCAGGCCAGGTGGGCTTGGGGCTG +
Preference number: 5 (lower is better)
Translates to: EETAEVLETHKGERP*PFLGPRAGQVGLGL
Trigger: CAGCCCCAAGCCCACCTGGCCTGCACGTGGACCCAGGAAGGGGCATGGGCGCTCTCCCTTGTGGGTCTCCAAGACTTCAGCTGTCTCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 90 bp GGGCTCTGCTCTGAGGCTGACCTCCGCATCTCTCGGGCATGTGGGTaGTGGCTGGGGACAGTCAACATGTGGGTGCCCAGGGGTTTGGGG +
Preference number: 5 (lower is better)
Translates to: GLCSEADLRISRACG*WLGTVNMWVPRGLG
Trigger: CCCCAAACCCCTGGGCACCCACATGTTGACTGTCCCCAGCCACCACCCACATGCCCGAGAGATGCGGAGGTCAGCCTCAGAGCAGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGCCCACGCTATTCTATaGGTGAGGCATGGCCCTCTA +
Preference number: 5 (lower is better)
Translates to: PVASLPEPDGPGDCRASAAHAIL*VRHGPL
Trigger: TAGAGGGCCATGCCTCACCAATAGAATAGCGTGGGC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCCTGCAGAGATGGGCTTaGCGATCTGAAGCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: PVASLPEPDGPGDCRASALQRWA*RSEALS
Trigger: GCTCAGAGCTTCAGATCGCAAAGCCCATCTCTGCAG...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCAAAGGGTGGTGTACATaGCGCTCCCATAGGACGGCA +
Preference number: 5 (lower is better)
Translates to: PVASLPEPDGPGDCRASAKGWCT*RSHRTA
Trigger: TGCCGTCCTATGGGAGCGCAATGTACACCACCCTTT...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGGGGGTTCCTCAAACTaGGGAAGTGCCACAGTTGCT +
Preference number: 5 (lower is better)
Translates to: PVASLPEPDGPGDCRASAGGSSN*GSATVA
Trigger: AGCAACTGTGGCACTTCCCAAGTTTGAGGAACCCCC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCTGCCTGCTTCTTTGCTaGGGGACCACGGTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: PVASLPEPDGPGDCRASACLLLC*GTTVFL
Trigger: CAAGAAGACCGTGGTCCCCAAGCAAAGAAGCAGGCA...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp CAGAGGGGCGGGCTTGCTTGGCCAGGACCCCGCGAGGCTCCTCCATaGACTAGGTTGAGGCTGCTGGGTTTGTGCCTCGAATCCTTCGGC +
Preference number: 5 (lower is better)
Translates to: QRGGLAWPGPREAPP*TRLRLLGLCLESFG
Trigger: GCCGAAGGATTCGAGGCACAAACCCAGCAGCCTCAACCTAGTTCATGGAGGAGCCTCGCGGGGTCCTGGCCAAGCAAGCCCGCCCCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372584.5
CDS CCA 90 bp GCTCTGAGGCTGACCTCCGCATCTCTCGGGCATGTGGGTGGTGGCTaGGGACAGTCAACATGTGGGTGCCCAGGGGTTTGGGGCGCATGT +
Preference number: 5 (lower is better)
Translates to: ALRLTSASLGHVGGG*GQSTCGCPGVWGAC
Trigger: ACATGCGCCCCAAACCCCTGGGCACCCACATGTTGACTGTCCCCAGCCACCACCCACATGCCCGAGAGATGCGGAGGTCAGCCTCAGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp CTGACCGTGGTGGTGACTCGGCCTGACCTGGAGACCATCTCCTGGTaGGCGAGTATCTGGGGAGGCCTGGGTCGGTGGTACCCTCGAGTT +
Preference number: 5 (lower is better)
Translates to: LTVVVTRPDLETISW*ASIWGGLGRWYPRV
Trigger: AACTCGAGGGTACCACCGACCCAGGCCTCCCCAGATACTCGCCCACCAGGAGATGGTCTCCAGGTCAGGCCGAGTCACCACCACGGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGAGGGGCGGGCTTGCTaGGCCAGGACCCCGCGAGGC +
Preference number: 5 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWEGRAC*ARTPRG
Trigger: GCCTCGCGGGGTCCTGGCCAAGCAAGCCCGCCCCTC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCATTGGGCGGGGCTCTCTaGGGTGGCAGCTGTGCCGCT +
Preference number: 5 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPLGGAL*GGSCAA
Trigger: AGCGGCACAGCTGCCACCCAAGAGAGCCCCGCCCAA...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp CAGAGGGGCGGGCTTGCTTGGCCAGGACCCCGCGAGGCTCCTCCATaGACTAGGTTGAGGCTGCTGGGTTTGTGCCTCGAATCCTGCCAA +
Preference number: 5 (lower is better)
Translates to: QRGGLAWPGPREAPP*TRLRLLGLCLESCQ
Trigger: TTGGCAGGATTCGAGGCACAAACCCAGCAGCCTCAACCTAGTTCATGGAGGAGCCTCGCGGGGTCCTGGCCAAGCAAGCCCGCCCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS GCA 90 bp GCGGGGCTAAGAGCTCTTGGGCGGGGCTCTCTTGGGTGGCAGCTGTaGCGCTGCCTGGGTATGGGACGCTGGAAGAAACACTGGTCTGAA +
Preference number: 5 (lower is better)
Translates to: AGLRALGRGSLGWQL*RCLGMGRWKKHWSE
Trigger: TTCAGACCAGTGTTTCTTCCAGCGTCCCATACCCAGGCAGCGGCACAGCTGCCACCCAAGAGAGCCCCGCCCAAGAGCTCTTAGCCCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp GAGCTCTTGGGCGGGGCTCTCTTGGGTGGCAGCTGTGCCGCTGCCTaGGTATGGGACGCTGGAAGAAACACTGGTCTGAATGGCCTCTCC +
Preference number: 5 (lower is better)
Translates to: ELLGGALLGGSCAAA*VWDAGRNTGLNGLS
Trigger: GGAGAGGCCATTCAGACCAGTGTTTCTTCCAGCGTCCCATACCCAGGCAGCGGCACAGCTGCCACCCAAGAGAGCCCCGCCCAAGAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp GCTCCCGGTAGAGGCTGGATTTTGGGGACTCCATGCTGCTGCGCCTaGACAGTGAGCTCCGCCTTGGCTTCACGCTGTCGATCTCGCTGG +
Preference number: 5 (lower is better)
Translates to: APGRGWILGTPCCCA*TVSSALASRCRSRW
Trigger: CCAGCGAGATCGACAGCGTGAAGCCAAGGCGGAGCTCACTGTCCAGGCGCAGCAGCATGGAGTCCCCAAAATCCAGCCTCTACCGGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp CCAGTGAAGGGAGGTGAACCTCTGTCATGCGGGGCTTGCGGGAGCTaGATGGCACAAGCCTTCCTGCCTCAGGATGCGGAGCTGTGGCCA +
Preference number: 5 (lower is better)
Translates to: PVKGGEPLSCGACGS*MAQAFLPQDAELWP
Trigger: TGGCCACAGCTCCGCATCCTGAGGCAGGAAGGCTTGTGCCATCCAGCTCCCGCAAGCCCCGCATGACAGAGGTTCACCTCCCTTCACTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 90 bp AAGGGACATGGGGCACGGGTCAAGTGCTGGGAGTGCAGAGGCAGGTaGCTGAAGATGTTCTCCTCTGTCCGGGCCAGGATGTGGCCGTGG +
Preference number: 5 (lower is better)
Translates to: KGHGARVKCWECRGR*LKMFSSVRARMWPW
Trigger: CCACGGCCACATCCTGGCCCGGACAGAGGAGAACATCTTCAGCCACCTGCCTCTGCACTCCCAGCACTTGACCCGTGCCCCATGTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACCAGAGGGGCGGGCTaGCTTGGCCAGGACCCCGCG +
Preference number: 5 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWTRGAG*LGQDPA
Trigger: CGCGGGGTCCTGGCCAAGCAAGCCCGCCCCTCTGGT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCATTGGGCGGGGCTCTCTaGGGTGGCAGCTGTGCCGCT +
Preference number: 5 (lower is better)
Translates to: GTGFRELSSPGHTADRSPLGGAL*GGSCAA
Trigger: AGCGGCACAGCTGCCACCCAAGAGAGCCCCGCCCAA...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACGAGGCACGAAGACTTaGGGGACTCCAGGAAGGTCC +
Preference number: 5 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRARGTKT*GTPGRS
Trigger: GGACCTTCCTGGAGTCCCCAAAGTCTTCGTGCCTCG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCAAGTGCAAACTGGGATaGCAGAGGCAGGAAAAACCC +
Preference number: 5 (lower is better)
Translates to: PVASLPEPDGPGDCRASAKCKLG*QRQEKP
Trigger: GGGTTTTTCCTGCCTCTGCAATCCCAGTTTGCACTT...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGGCCAGCACTTCCTGTaGCCAGTGGGGCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: GTGFRELSSPGHTADRSPGQHFL*PVGPGW
Trigger: CCAGCCTGGCCCCACTGGCAACAGGAAGTGCTGGCC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGGCCAGCACTTCCTGTaGCCAGTGGGGCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRGQHFL*PVGPGW
Trigger: CCAGCCTGGCCCCACTGGCAACAGGAAGTGCTGGCC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCCCTGGGGCAGGCACTaGATTCACACAGCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAPWGRH*IHTAWL
Trigger: CAGCCAGGCTGTGTGAATCAAGTGCCTGCCCCAGGG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCAACACAGAAGCAGAATaGGTGGAACAGGCTTTCGGG +
Preference number: 5 (lower is better)
Translates to: PVASLPEPDGPGDCRASANTEAE*VEQAFG
Trigger: CCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTT...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp GGCTTGCTTGGCCAGGACCCCGCGAGGCTCCTCCATGAACTAGGTTaGGGCTGCTGGGTTTGTGCCTCGAATCCTTCGGCCTTGGGATGG +
Preference number: 5 (lower is better)
Translates to: GLLGQDPARLLHELG*GCWVCASNPSALGW
Trigger: CCATCCCAAGGCCGAAGGATTCGAGGCACAAACCCAGCAGCCTCAACCTAGTTCATGGAGGAGCCTCGCGGGGTCCTGGCCAAGCAAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372584.5
CDS GCA 90 bp GCCACGAAGGAGCCAGAGGGTCCAGGTCTCATGGGGTCAACCAGTTaGCATGTGGACCCCTCCAGGAGATGCTCAGGTTTGCCAGGCGAC +
Preference number: 5 (lower is better)
Translates to: ATKEPEGPGLMGSTS*HVDPSRRCSGLPGD
Trigger: GTCGCCTGGCAAACCTGAGCATCTCCTGGAGGGGTCCACATGGCAACTGGTTGACCCCATGAGACCTGGACCCTCTGGCTCCTTCGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp CTGCGTGTCTCGGTCATGTGGGCAGAATGGGAAACGTTGGGGCTCTaGTCTGAGGCTGACCTCCGCATCTCTCGGGCATGTGGGTGGTGG +
Preference number: 5 (lower is better)
Translates to: LRVSVMWAEWETLGL*SEADLRISRACGWW
Trigger: CCACCACCCACATGCCCGAGAGATGCGGAGGTCAGCCTCAGAGCAGAGCCCCAACGTTTCCCATTCTGCCCACATGACCGAGACACGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp AGCGTTCGTGGCTGGAACTGTGGCTCCCAGAGCTGTATAGCCCGCTaGAGAGAAGGGGCTGCTTGGGTCTTGGGGAGAGCTCTGCAGGGT +
Preference number: 5 (lower is better)
Translates to: SVRGWNCGSQSCIAR*REGAAWVLGRALQG
Trigger: ACCCTGCAGAGCTCTCCCCAAGACCCAAGCAGCCCCTTCTCTCCAGCGGGCTATACAGCTCTGGGAGCCACAGTTCCAGCCACGAACGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp GCTGTGCTGGACTGGGACAGGGAACAGCGTTCGTGGCTGGAACTGTaGCTCCCAGAGCTGTATAGCCCGCTGGAGAGAAGGGGCTGCTTG +
Preference number: 5 (lower is better)
Translates to: AVLDWDREQRSWLEL*LPELYSPLERRGCL
Trigger: CAAGCAGCCCCTTCTCTCCAGCGGGCTATACAGCTCTGGGAGCCACAGTTCCAGCCACGAACGCTGTTCCCTGTCCCAGTCCAGCACAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp GTGACTGGGCTGTGCTGGACTGGGACAGGGAACAGCGTTCGTGGCTaGAACTGTGGCTCCCAGAGCTGTATAGCCCGCTGGAGAGAAGGG +
Preference number: 5 (lower is better)
Translates to: VTGLCWTGTGNSVRG*NCGSQSCIARWREG
Trigger: CCCTTCTCTCCAGCGGGCTATACAGCTCTGGGAGCCACAGTTCCAGCCACGAACGCTGTTCCCTGTCCCAGTCCAGCACAGCCCAGTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp TTCTCAGCTGGGAGCTGGGCAAGTGTCTGGCTGCGCTGGGGCCATTaGAACTCCTCAGTCTTCTCAGGTTCCTTAGGGGGCGGCTCTGGC +
Preference number: 5 (lower is better)
Translates to: FSAGSWASVWLRWGH*NSSVFSGSLGGGSG
Trigger: GCCAGAGCCGCCCCCTAAGGAACCTGAGAAGACTGAGGAGTTCCAATGGCCCCAGCGCAGCCAGACACTTGCCCAGCTCCCAGCTGAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp GGTGGCAGCTTCTCAGCTGGGAGCTGGGCAAGTGTCTGGCTGCGCTaGGGCCATTGGAACTCCTCAGTCTTCTCAGGTTCCTTAGGGGGC +
Preference number: 5 (lower is better)
Translates to: GGSFSAGSWASVWLR*GHWNSSVFSGSLGG
Trigger: GCCCCCTAAGGAACCTGAGAAGACTGAGGAGTTCCAATGGCCCCAGCGCAGCCAGACACTTGCCCAGCTCCCAGCTGAGAAGCTGCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp GAGACCATCTCCTGGTGGGCGAGTATCTGGGGAGGCCTGGGTCGGTaGTACCCTCGAGTTTGGAGAGCACATGTGCTCGAGGGGCCAGTT +
Preference number: 5 (lower is better)
Translates to: ETISWWASIWGGLGR*YPRVWRAHVLEGPV
Trigger: AACTGGCCCCTCGAGCACATGTGCTCTCCAAACTCGAGGGTACCACCGACCCAGGCCTCCCCAGATACTCGCCCACCAGGAGATGGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 90 bp CTGACCTGGAGACCATCTCCTGGTGGGCGAGTATCTGGGGAGGCCTaGGTCGGTGGTACCCTCGAGTTTGGAGAGCACATGTGCTCGAGG +
Preference number: 5 (lower is better)
Translates to: LTWRPSPGGRVSGEA*VGGTLEFGEHMCSR
Trigger: CCTCGAGCACATGTGCTCTCCAAACTCGAGGGTACCACCGACCCAGGCCTCCCCAGATACTCGCCCACCAGGAGATGGTCTCCAGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 90 bp GTGACTCGGCCTGACCTGGAGACCATCTCCTGGTGGGCGAGTATCTaGGGAGGCCTGGGTCGGTGGTACCCTCGAGTTTGGAGAGCACAT +
Preference number: 5 (lower is better)
Translates to: VTRPDLETISWWASI*GGLGRWYPRVWRAH
Trigger: ATGTGCTCTCCAAACTCGAGGGTACCACCGACCCAGGCCTCCCCAGATACTCGCCCACCAGGAGATGGTCTCCAGGTCAGGCCGAGTCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 90 bp AGAGGCAGGTGGCTGAAGATGTTCTCCTCTGTCCGGGCCAGGATGTaGCCGTGGAAGTCATGGAGGGCGGAGAAGGGTCGGGAGGAGAGA +
Preference number: 5 (lower is better)
Translates to: RGRWLKMFSSVRARM*PWKSWRAEKGREER
Trigger: TCTCTCCTCCCGACCCTTCTCCGCCCTCCATGACTTCCACGGCCACATCCTGGCCCGGACAGAGGAGAACATCTTCAGCCACCTGCCTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS-3UTR CAA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGAGGGGCGGGCTTGCTaGGCCAGGACCCCGCGAGGC +
Preference number: 5 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGEGRAC*ARTPRG
Trigger: GCCTCGCGGGGTCCTGGCCAAGCAAGCCCGCCCCTC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCGTGCTATGCAAACGGTaGAAGGTTGGAGACATCTGT +
Preference number: 5 (lower is better)
Translates to: PVASLPEPDGPGDCRASAVLCKR*KVGDIC
Trigger: ACAGATGTCTCCAACCTTCAACCGTTTGCATAGCAC...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGGCTTCCTCTCCTTCTaGTGTGCCTCTTCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAGFLSF*CASSVG
Trigger: GCCCACAGAAGAGGCACACAAGAAGGAGAGGAAGCC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATCCACCACGGCCTCGTaGATGGTGATGAGCTTCGTG +
Preference number: 5 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRASTTAS*MVMSFV
Trigger: CACGAAGCTCATCACCATCAACGAGGCCGTGGTGGA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAACAGTGAGCTCCGCCTaGGCTTCACGCTGTCGATCT +
Preference number: 5 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRATVSSA*ASRCRS
Trigger: AGATCGACAGCGTGAAGCCAAGGCGGAGCTCACTGT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACTGGCTTGGGAGTCCTaGGCTGGAAGCCCGTGGGTC +
Preference number: 5 (lower is better)
Translates to: GTGFRELSSPGHTADRSPLAWES*AGSPWV
Trigger: GACCCACGGGCTTCCAGCCAAGGACTCCCAAGCCAG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACCTCCTTCGAAGATTTaGATCCTCGCCGGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAPPSKI*ILAGSP
Trigger: AGGGGAGCCGGCGAGGATCAAAATCTTCGAAGGAGG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGCAGAAGGCTCGGGGTaGGTCGGTGCACGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWAEGSG*VGARGD
Trigger: GTCCCCGCGTGCACCGACCAACCCCGAGCCTTCTGC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCAGTATCCAGGAGCCCTaGGGGAGCCAGCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: LYRGMATPRISTEHVAGISIQEP*GSQPSS
Trigger: GGAGGAGGGCTGGCTCCCCAAGGGCTCCTGGATACT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCACTGGCCTCCTGGGACTaGGAGGAGTCACTTTCTGTC +
Preference number: 5 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRALASWD*EESLSV
Trigger: GACAGAAAGTGACTCCTCCAAGTCCCAGGAGGCCAG...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp GTGGCAGGTGGCCCCCACGAGTCCCCCGTGTGCTATGCAAACGGTTaGAGGTTGGAGACATCTGTGTCCATGGCCCAGTCATCCCTGGTC +
Preference number: 5 (lower is better)
Translates to: VAGGPHESPVCYANG*RLETSVSMAQSSLV
Trigger: GACCAGGGATGACTGGGCCATGGACACAGATGTCTCCAACCTTCAACCGTTTGCATAGCACACGGGGGACTCGTGGGGGCCACCTGCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp GCTGTGCCGCTGCCTGGGTATGGGACGCTGGAAGAAACACTGGTCTaGATGGCCTCTCCTTTGGTCAGCCGCTTCCGGGGACTTCCCTCA +
Preference number: 5 (lower is better)
Translates to: AVPLPGYGTLEETLV*MASPLVSRFRGLPS
Trigger: TGAGGGAAGTCCCCGGAAGCGGCTGACCAAAGGAGAGGCCATTCAGACCAGTGTTTCTTCCAGCGTCCCATACCCAGGCAGCGGCACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp GTAGAGGCTGGATTTTGGGGACTCCATGCTGCTGCGCCTGGACAGTaGGCTCCGCCTTGGCTTCACGCTGTCGATCTCGCTGGTGTCCAC +
Preference number: 5 (lower is better)
Translates to: VEAGFWGLHAAAPGQ*APPWLHAVDLAGVH
Trigger: GTGGACACCAGCGAGATCGACAGCGTGAAGCCAAGGCGGAGCTCACTGTCCAGGCGCAGCAGCATGGAGTCCCCAAAATCCAGCCTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp ATTGCCGGCTGGCGCTTCAGCATCCGGGGGTGGGAGGTAAACACGTaGCTGCTGTGGCTCAGGGCTTCGGAGTCGGTGATATGGTCATCG +
Preference number: 5 (lower is better)
Translates to: IAGWRFSIRGWEVNT*LLWLRASESVIWSS
Trigger: CGATGACCATATCACCGACTCCGAAGCCCTGAGCCACAGCAGTCACGTGTTTACCTCCCACCCCCGGATGCTGAAGCGCCAGCCGGCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp GGCTTGCTTGGCCAGGACCCCGCGAGGCTCCTCCATGAACTAGGTTaGGGCTGCTGGGTTTGTGCCTCGAATCCTGCCAAAAACCAGCCG +
Preference number: 5 (lower is better)
Translates to: GLLGQDPARLLHELG*GCWVCASNPAKNQP
Trigger: CGGCTGGTTTTTGGCAGGATTCGAGGCACAAACCCAGCAGCCTCAACCTAGTTCATGGAGGAGCCTCGCGGGGTCCTGGCCAAGCAAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS GCA 90 bp TCAGCTGGCAGTGGCAGGTGGCCCCCACGAGTCCCCCGTGTGCTATaGAAACGGTTGAAGGTTGGAGACATCTGTGTCCATGGCCCAGTC +
Preference number: 5 (lower is better)
Translates to: SAGSGRWPPRVPRVL*KRLKVGDICVHGPV
Trigger: GACTGGGCCATGGACACAGATGTCTCCAACCTTCAACCGTTTGCATAGCACACGGGGGACTCGTGGGGGCCACCTGCCACTGCCAGCTGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp CTAAGAGCTCTTGGGCGGGGCTCTCTTGGGTGGCAGCTGTGCCGCTaGCTGGGTATGGGACGCTGGAAGAAACACTGGTCTGAATGGCCT +
Preference number: 5 (lower is better)
Translates to: LRALGRGSLGWQLCR*LGMGRWKKHWSEWP
Trigger: AGGCCATTCAGACCAGTGTTTCTTCCAGCGTCCCATACCCAGGCAGCGGCACAGCTGCCACCCAAGAGAGCCCCGCCCAAGAGCTCTTAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp GGGCCGCATGCCTCCAGCTCCAGCTCTTCTTGGGGCTCCAGAGTGTaGCAGTTTCCCTTCAAGCACCAGTGTCCTCAACCTCTGGCATGG +
Preference number: 5 (lower is better)
Translates to: GPHASSSSSSWGSRV*QFPFKHQCPQPLAW
Trigger: CCATGCCAGAGGTTGAGGACACTGGTGCTTGAAGGGAAACTGGCACACTCTGGAGCCCCAAGAAGAGCTGGAGCTGGAGGCATGCGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS CCA 90 bp TGCCGCTGCCTGGGTATGGGACGCTGGAAGAAACACTGGTCTGAATaGCCTCTCCTTTGGTCAGCCGCTTCCGGGGACTTCCCTCAGCCT +
Preference number: 5 (lower is better)
Translates to: CRCLGMGRWKKHWSE*PLLWSAASGDFPQP
Trigger: AGGCTGAGGGAAGTCCCCGGAAGCGGCTGACCAAAGGAGAGGCCATTCAGACCAGTGTTTCTTCCAGCGTCCCATACCCAGGCAGCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp TGGCAGCTGTGCCGCTGCCTGGGTATGGGACGCTGGAAGAAACACTaGTCTGAATGGCCTCTCCTTTGGTCAGCCGCTTCCGGGGACTTC +
Preference number: 5 (lower is better)
Translates to: WQLCRCLGMGRWKKH*SEWPLLWSAASGDF
Trigger: GAAGTCCCCGGAAGCGGCTGACCAAAGGAGAGGCCATTCAGACCAGTGTTTCTTCCAGCGTCCCATACCCAGGCAGCGGCACAGCTGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp GGCTCTCTTGGGTGGCAGCTGTGCCGCTGCCTGGGTATGGGACGCTaGAAGAAACACTGGTCTGAATGGCCTCTCCTTTGGTCAGCCGCT +
Preference number: 5 (lower is better)
Translates to: GSLGWQLCRCLGMGR*KKHWSEWPLLWSAA
Trigger: AGCGGCTGACCAAAGGAGAGGCCATTCAGACCAGTGTTTCTTCCAGCGTCCCATACCCAGGCAGCGGCACAGCTGCCACCCAAGAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp TTGGGCGGGGCTCTCTTGGGTGGCAGCTGTGCCGCTGCCTGGGTATaGGACGCTGGAAGAAACACTGGTCTGAATGGCCTCTCCTTTGGT +
Preference number: 5 (lower is better)
Translates to: LGGALLGGSCAAAWV*DAGRNTGLNGLSFG
Trigger: ACCAAAGGAGAGGCCATTCAGACCAGTGTTTCTTCCAGCGTCCCATACCCAGGCAGCGGCACAGCTGCCACCCAAGAGAGCCCCGCCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp CGGTACTGGGCGGGTGCTGGAGGCTCAGCAGTGATTGTTCAGGCTTaGTTTTCTCACTGTGGGATGACAGGGGCTCCCGGTAGAGGCTGG +
Preference number: 5 (lower is better)
Translates to: RYWAGAGGSAVIVQA*FSHCGMTGAPGRGW
Trigger: CCAGCCTCTACCGGGAGCCCCTGTCATCCCACAGTGAGAAAACCAAGCCTGAACAATCACTGCTGAGCCTCCAGCACCCGCCCAGTACCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp ACGTTGTTCTCCTCTCCTTCCCTGATTCTGAACCGGACCCTGGCTTaGGAGTCCTTGGCTGGAAGCCCGTGGGTCCCTCCAAGGAGGGCA +
Preference number: 5 (lower is better)
Translates to: TLFSSPSLILNRTLA*ESLAGSPWVPPRRA
Trigger: TGCCCTCCTTGGAGGGACCCACGGGCTTCCAGCCAAGGACTCCCAAGCCAGGGTCCGGTTCAGAATCAGGGAAGGAGAGGAGAACAACGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAACCAGAGGGGCGGGCTaGCTTGGCCAGGACCCCGCG +
Preference number: 5 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSTRGAG*LGQDPA
Trigger: CGCGGGGTCCTGGCCAAGCAAGCCCGCCCCTCTGGT...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGTGGAGCACGCTGGGCTaGGCACAGGGCCGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVWSTLG*AQGRLQ
Trigger: CTGCAGCCGGCCCTGTGCCAAGCCCAGCGTGCTCCA...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCACTTCGTCCGAGGGCTaGGAGGCTGTGTCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: GWWHWFCPSGHGINVEAATSSEG*EAVSLL
Trigger: CAGCAAAGACACAGCCTCCAAGCCCTCGGACGAAGT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTGGGTGCCCAGGGGTTaGGGGCGCATGTCAGATGAG +
Preference number: 5 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTWVPRG*GRMSDE
Trigger: CTCATCTGACATGCGCCCCAAACCCCTGGGCACCCA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACGGCTGCCTGCTTCTTaGCTTGGGGACCACGGTCTT +
Preference number: 5 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPRLPAS*LGDHGL
Trigger: AAGACCGTGGTCCCCAAGCAAAGAAGCAGGCAGCCG...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGCAGAAGGCTCGGGGTaGGTCGGTGCACGCGGGGAC +
Preference number: 5 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVAEGSG*VGARGD
Trigger: GTCCCCGCGTGCACCGACCAACCCCGAGCCTTCTGC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGAGTATCCAGGAGCCCTaGGGGAGCCAGCCCTCCTCC +
Preference number: 5 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGSIQEP*GSQPSS
Trigger: GGAGGAGGGCTGGCTCCCCAAGGGCTCCTGGATACT...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCGGCTGCACTGTTCATaGCTAGGCTGCCCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTRLHCS*LGCPGR
Trigger: CCTCCCTGGGCAGCCTAGCAATGAACAGTGCAGCCG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACGGCTGCACTGTTCATaGCTAGGCTGCCCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: GTGFRELSSPGHTADRSPRLHCS*LGCPGR
Trigger: CCTCCCTGGGCAGCCTAGCAATGAACAGTGCAGCCG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp GTCCGAGTCCTCCAGGTCCGAAAACTGGTGCTCCTCCACAGCCTCTaGACCCTCTCGTCCTTCCGAGTCCTGGAACAGGTCGTCACTGGT +
Preference number: 5 (lower is better)
Translates to: VRVLQVRKLVLLHSL*TLSSFRVLEQVVTG
Trigger: ACCAGTGACGACCTGTTCCAGGACTCGGAAGGACGAGAGGGTTCAGAGGCTGTGGAGGAGCACCAGTTTTCGGACCTGGAGGACTCGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS TCA 90 bp GCAGGCACTAAAAAGGCGGGAGTAAGAGCGATGAGAGTAGAACGCTaGGCTGAGGCTGGCCTCCTTCACGGCCACCTTCCTCCAGGGGTG +
Preference number: 5 (lower is better)
Translates to: AGTKKAGVRAMRVER*AEAGLLHGHLPPGV
Trigger: CACCCCTGGAGGAAGGTGGCCGTGAAGGAGGCCAGCCTCAGCTCAGCGTTCTACTCTCATCGCTCTTACTCCCGCCTTTTTAGTGCCTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000489103.5
ENST00000491442.5
CDS GCA 90 bp CTGGTGTCCACCACGGCCTCGTTGATGGTGATGAGCTTCGTGATGTaGTCGATCACCTGCGTCCGGGGTACAGACAAAGGCACCAGGCTG +
Preference number: 5 (lower is better)
Translates to: LVSTTASLMVMSFVM*SITCVRGTDKGTRL
Trigger: CAGCCTGGTGCCTTTGTCTGTACCCCGGACGCAGGTGATCGAGCACATCACGAAGCTCATCACCATCAACGAGGCCGTGGTGGACACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp CCCTCTCAAACGAGGCTGAGCGGCTGGACCCACTCAAAGAGACATTaGTTTCCTGGCTCGGGCTGCGAGACAGAGGCACAGAGGACTCGA +
Preference number: 5 (lower is better)
Translates to: PSQTRLSGWTHSKRH*FPGSGCETEAQRTR
Trigger: TCGAGTCCTCTGTGCCTCTGTCTCGCAGCCCGAGCCAGGAAAGCAATGTCTCTTTGAGTGGGTCCAGCCGCTCAGCCTCGTTTGAGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp CGGGGCTTGCGGGAGCTGGATGGCACAAGCCTTCCTGCCTCAGGATaGGGAGCTGTGGCCATGGTGTATGTCTCTTTGCTCACTTTCTGC +
Preference number: 5 (lower is better)
Translates to: RGLRELDGTSLPASG*GAVAMVYVSLLTFC
Trigger: GCAGAAAGTGAGCAAAGAGACATACACCATGGCCACAGCTCCGCATCCTGAGGCAGGAAGGCTTGTGCCATCCAGCTCCCGCAAGCCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS GCA 90 bp CTCTGTCATGCGGGGCTTGCGGGAGCTGGATGGCACAAGCCTTCCTaGCTCAGGATGCGGAGCTGTGGCCATGGTGTATGTCTCTTTGCT +
Preference number: 5 (lower is better)
Translates to: LCHAGLAGAGWHKPS*LRMRSCGHGVCLFA
Trigger: AGCAAAGAGACATACACCATGGCCACAGCTCCGCATCCTGAGGCAGGAAGGCTTGTGCCATCCAGCTCCCGCAAGCCCCGCATGACAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS GCA 90 bp AGGGCTCTTGGTCATGGCTGGTACTTCTACCCTTCGTGGGCCGCATaGCTCCAGCTCCAGCTCTTCTTGGGGCTCCAGAGTGTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: RALGHGWYFYPSWAA*LQLQLFLGLQSVPV
Trigger: AACTGGCACACTCTGGAGCCCCAAGAAGAGCTGGAGCTGGAGGCATGCGGCCCACGAAGGGTAGAAGTACCAGCCATGACCAAGAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS CCA 90 bp TCCATGGCCCAGTCATCCCTGGTCCTGGCACAAGAGATGCCACGCTaGATGCTGGGGGTGGCTCTTCTCCCCTTTAGTTCTGGGTTGGAG +
Preference number: 5 (lower is better)
Translates to: SMAQSSLVLAQEMPR*MLGVALLPFSSGLE
Trigger: CTCCAACCCAGAACTAAAGGGGAGAAGAGCCACCCCCAGCATCCAGCGTGGCATCTCTTGTGCCAGGACCAGGGATGACTGGGCCATGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp ACGGTTGAAGGTTGGAGACATCTGTGTCCATGGCCCAGTCATCCCTaGTCCTGGCACAAGAGATGCCACGCTGGATGCTGGGGGTGGCTC +
Preference number: 5 (lower is better)
Translates to: TVEGWRHLCPWPSHP*SWHKRCHAGCWGWL
Trigger: GAGCCACCCCCAGCATCCAGCGTGGCATCTCTTGTGCCAGGACCAGGGATGACTGGGCCATGGACACAGATGTCTCCAACCTTCAACCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp CCTCCAAGGAGGGCACTGATTTACTTGGTTCTGCTGGTGACTTGGTaGACTCCAGGGGAAGGTTCCGAGCAGCATCAGATGGCCCGGGGC +
Preference number: 5 (lower is better)
Translates to: PPRRALIYLVLLVTW*TPGEGSEQHQMARG
Trigger: GCCCCGGGCCATCTGATGCTGCTCGGAACCTTCCCCTGGAGTCCACCAAGTCACCAGCAGAACCAAGTAAATCAGTGCCCTCCTTGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp CCCCTGATGATTGGGCCATCTCTGCCAGGCGCAACCTCTTCTTTTTaGGTGGCAGCTTCTCAGCTGGGAGCTGGGCAAGTGTCTGGCTGC +
Preference number: 5 (lower is better)
Translates to: PLMIGPSLPGATSSF*VAASQLGAGQVSGC
Trigger: GCAGCCAGACACTTGCCCAGCTCCCAGCTGAGAAGCTGCCACCCAAAAAGAAGAGGTTGCGCCTGGCAGAGATGGCCCAATCATCAGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp AACGAGGCTGAGCGGCTGGACCCACTCAAAGAGACATTGCTTTCCTaGCTCGGGCTGCGAGACAGAGGCACAGAGGACTCGAAGCTGGAC +
Preference number: 5 (lower is better)
Translates to: NEAERLDPLKETLLS*LGLRDRGTEDSKLD
Trigger: GTCCAGCTTCGAGTCCTCTGTGCCTCTGTCTCGCAGCCCGAGCCAGGAAAGCAATGTCTCTTTGAGTGGGTCCAGCCGCTCAGCCTCGTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp ATCCCACCGATGGGAATCAAGGGACATGGGGCACGGGTCAAGTGCTaGGAGTGCAGAGGCAGGTGGCTGAAGATGTTCTCCTCTGTCCGG +
Preference number: 5 (lower is better)
Translates to: IPPMGIKGHGARVKC*ECRGRWLKMFSSVR
Trigger: CCGGACAGAGGAGAACATCTTCAGCCACCTGCCTCTGCACTCCCAGCACTTGACCCGTGCCCCATGTCCCTTGATTCCCATCGGTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS-3UTR CAA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGCCTTCTTGGTGCCCTaGACACTTTGTTCAGGATCC +
Preference number: 5 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAAFLVP*TLCSGS
Trigger: GGATCCTGAACAAAGTGTCAAGGGCACCAAGAAGGC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCATGGGGTCAACCAGTaGCCATGTGGACCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTHGVNQ*PCGPLQ
Trigger: CTGGAGGGGTCCACATGGCAACTGGTTGACCCCATG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCGAGGCACGAAGACTTaGGGGACTCCAGGAAGGTCC +
Preference number: 5 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRRGTKT*GTPGRS
Trigger: GGACCTTCCTGGAGTCCCCAAAGTCTTCGTGCCTCG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGAACCGGACCCTGGCTaGGGAGTCCTTGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPEPDPG*GVLGWK
Trigger: CTTCCAGCCAAGGACTCCCAAGCCAGGGTCCGGTTC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGGGGTGGTGGAACACTaGCAGTGCTTCTGTGTAGGG +
Preference number: 5 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPGVVEH*QCFCVG
Trigger: CCCTACACAGAAGCACTGCAAGTGTTCCACCACCCC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCATGGGAAGTGCCACAGTaGCTGAGCTGCCTTGGGACT +
Preference number: 5 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPWEVPQ*LSCLGT
Trigger: AGTCCCAAGGCAGCTCAGCAACTGTGGCACTTCCCA...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTGCTTCCCCCTGCTGTaGATGAACTCCCCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTCFPLL*MNSPPG
Trigger: GCCTGGAGGGGAGTTCATCAACAGCAGGGGGAAGCA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTGTGGCTTCTCTGCCTGAGCCTGACGGGCCCGGTGACTGCCGGGCCTCTGCCAGATCAGGTTGTTCCTaGGAATCTTCTTTCTTCACG +
Preference number: 5 (lower is better)
Translates to: PVASLPEPDGPGDCRASARSGCS*ESSFFT
Trigger: CGTGAAGAAAGAAGATTCCAAGGAACAACCTGATCT...GGCAGAGGCCCGGCAGTCACCGGGCCCGTCAGGCTCAGGCAGAGAAGCCACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCAGCATGCTGGGCTTCTaGCAGCGAATTCCACACTCC +
Preference number: 5 (lower is better)
Translates to: GWWHWFCPSGHGINVEAASMLGF*QRIPHS
Trigger: GGAGTGTGGAATTCGCTGCAAGAAGCCCAGCATGCT...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGGGACCACGGTCTTCTaGGGGACACAGGCTTGTAGC +
Preference number: 5 (lower is better)
Translates to: GTGFRELSSPGHTADRSPGTTVF*GTQACS
Trigger: GCTACAAGCCTGTGTCCCCAAGAAGACCGTGGTCCC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTGCCTGCTTCTTTGCTaGGGGACCACGGTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: GWWHWFCPSGHGINVEAACLLLC*GTTVFL
Trigger: CAAGAAGACCGTGGTCCCCAAGCAAAGAAGCAGGCA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACGGCTGCCTGCTTCTTaGCTTGGGGACCACGGTCTT +
Preference number: 5 (lower is better)
Translates to: GTGFRELSSPGHTADRSPRLPAS*LGDHGL
Trigger: AAGACCGTGGTCCCCAAGCAAAGAAGCAGGCAGCCG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAATCCACCAGCCACAGTaGTGGGTATTTCCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAIHQPQ*WVFPWG
Trigger: ACCCCAAGGAAATACCCACAACTGTGGCTGGTGGAT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCCCTGGGGCAGGCACTaGATTCACACAGCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPPWGRH*IHTAWL
Trigger: CAGCCAGGCTGTGTGAATCAAGTGCCTGCCCCAGGG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGGGAAAGGCCACGAATaGGAAGAGGCAAGTACAGCC +
Preference number: 5 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAGKGHE*EEASTA
Trigger: GGCTGTACTTGCCTCTTCCAATTCGTGGCCTTTCCC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGCTTGGAGAACTGTGTaGGAGGGAGGCCTTCGGCCT +
Preference number: 5 (lower is better)
Translates to: LYRGMATPRISTEHVAGIAWRTV*EGGLRP
Trigger: AGGCCGAAGGCCTCCCTCCAACACAGTTCTCCAAGC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS-3UTR CAA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTTGAGGCTGCTGGGTTaGTGCCTCGAATCCTGCGGG +
Preference number: 5 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTLRLLG*CLESCG
Trigger: CCCGCAGGATTCGAGGCACAAACCCAGCAGCCTCAA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000643665.1
CDS TCA 90 bp GCCATGTGGACCCCTCCAGGAGATGCTCAGGTTTGCCAGGCGACATaGATGCTGGTGTCAGAGGGTGCTGCGGAAGCTGTGAGATGTGGA +
Preference number: 5 (lower is better)
Translates to: AMWTPPGDAQVCQAT*MLVSEGAAEAVRCG
Trigger: TCCACATCTCACAGCTTCCGCAGCACCCTCTGACACCAGCATTCATGTCGCCTGGCAAACCTGAGCATCTCCTGGAGGGGTCCACATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp TGGCCCAGTCATCCCTGGTCCTGGCACAAGAGATGCCACGCTGGATaGTGGGGGTGGCTCTTCTCCCCTTTAGTTCTGGGTTGGAGATCA +
Preference number: 5 (lower is better)
Translates to: WPSHPWSWHKRCHAG*WGWLFSPLVLGWRS
Trigger: TGATCTCCAACCCAGAACTAAAGGGGAGAAGAGCCACCCCCAGCATCCAGCGTGGCATCTCTTGTGCCAGGACCAGGGATGACTGGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp CATCTGTGTCCATGGCCCAGTCATCCCTGGTCCTGGCACAAGAGATaGCACGCTGGATGCTGGGGGTGGCTCTTCTCCCCTTTAGTTCTG +
Preference number: 5 (lower is better)
Translates to: HLCPWPSHPWSWHKR*HAGCWGWLFSPLVL
Trigger: CAGAACTAAAGGGGAGAAGAGCCACCCCCAGCATCCAGCGTGGCATCTCTTGTGCCAGGACCAGGGATGACTGGGCCATGGACACAGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp ACGGCCTCGTTGATGGTGATGAGCTTCGTGATGTGCTCGATCACCTaGGTCCGGGGTACAGACAAAGGCACCAGGCTGGGCTTGTCTTCG +
Preference number: 5 (lower is better)
Translates to: TASLMVMSFVMCSIT*VRGTDKGTRLGLSS
Trigger: CGAAGACAAGCCCAGCCTGGTGCCTTTGTCTGTACCCCGGACGCAGGTGATCGAGCACATCACGAAGCTCATCACCATCAACGAGGCCGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp TGGATCCCACCGATGGGAATCAAGGGACATGGGGCACGGGTCAAGTaGTGGGAGTGCAGAGGCAGGTGGCTGAAGATGTTCTCCTCTGTC +
Preference number: 5 (lower is better)
Translates to: WIPPMGIKGHGARVK*WECRGRWLKMFSSV
Trigger: GACAGAGGAGAACATCTTCAGCCACCTGCCTCTGCACTCCCAGCACTTGACCCGTGCCCCATGTCCCTTGATTCCCATCGGTGGGATCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 90 bp CATCCCTGGTCCTGGCACAAGAGATGCCACGCTGGATGCTGGGGGTaGCTCTTCTCCCCTTTAGTTCTGGGTTGGAGATCAACGGCCTTG +
Preference number: 5 (lower is better)
Translates to: HPWSWHKRCHAGCWG*LFSPLVLGWRSTAL
Trigger: CAAGGCCGTTGATCTCCAACCCAGAACTAAAGGGGAGAAGAGCCACCCCCAGCATCCAGCGTGGCATCTCTTGTGCCAGGACCAGGGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp CCCAGTCATCCCTGGTCCTGGCACAAGAGATGCCACGCTGGATGCTaGGGGTGGCTCTTCTCCCCTTTAGTTCTGGGTTGGAGATCAACG +
Preference number: 5 (lower is better)
Translates to: PSHPWSWHKRCHAGC*GWLFSPLVLGWRST
Trigger: CGTTGATCTCCAACCCAGAACTAAAGGGGAGAAGAGCCACCCCCAGCATCCAGCGTGGCATCTCTTGTGCCAGGACCAGGGATGACTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp GGTATGGGACGCTGGAAGAAACACTGGTCTGAATGGCCTCTCCTTTaGTCAGCCGCTTCCGGGGACTTCCCTCAGCCTTCTTGGTGCCCT +
Preference number: 5 (lower is better)
Translates to: GMGRWKKHWSEWPLL*SAASGDFPQPSWCP
Trigger: AGGGCACCAAGAAGGCTGAGGGAAGTCCCCGGAAGCGGCTGACCAAAGGAGAGGCCATTCAGACCAGTGTTTCTTCCAGCGTCCCATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp ATTCTGAACCGGACCCTGGCTTGGGAGTCCTTGGCTGGAAGCCCGTaGGTCCCTCCAAGGAGGGCACTGATTTACTTGGTTCTGCTGGTG +
Preference number: 5 (lower is better)
Translates to: ILNRTLAWESLAGSP*VPPRRALIYLVLLV
Trigger: CACCAGCAGAACCAAGTAAATCAGTGCCCTCCTTGGAGGGACCCACGGGCTTCCAGCCAAGGACTCCCAAGCCAGGGTCCGGTTCAGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp TCCTTCCCTGATTCTGAACCGGACCCTGGCTTGGGAGTCCTTGGCTaGAAGCCCGTGGGTCCCTCCAAGGAGGGCACTGATTTACTTGGT +
Preference number: 5 (lower is better)
Translates to: SFPDSEPDPGLGVLG*KPVGPSKEGTDLLG
Trigger: ACCAAGTAAATCAGTGCCCTCCTTGGAGGGACCCACGGGCTTCCAGCCAAGGACTCCCAAGCCAGGGTCCGGTTCAGAATCAGGGAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp AGGATTTGCTGCGTGTCTCGGTCATGTGGGCAGAATGGGAAACGTTaGGGCTCTGCTCTGAGGCTGACCTCCGCATCTCTCGGGCATGTG +
Preference number: 5 (lower is better)
Translates to: RICCVSRSCGQNGKR*GSALRLTSASLGHV
Trigger: CACATGCCCGAGAGATGCGGAGGTCAGCCTCAGAGCAGAGCCCCAACGTTTCCCATTCTGCCCACATGACCGAGACACGCAGCAAATCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp GCTGAGCTGAGGCTGGCCTCCTTCACGGCCACCTTCCTCCAGGGGTaGATCCGTGTTCCAGTCACCTCCAAACACACAAAGATGTCAGTG +
Preference number: 5 (lower is better)
Translates to: AELRLASFTATFLQG*IRVPVTSKHTKMSV
Trigger: CACTGACATCTTTGTGTGTTTGGAGGTGACTGGAACACGGATCCACCCCTGGAGGAAGGTGGCCGTGAAGGAGGCCAGCCTCAGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489103.5
ENST00000491442.5
CDS-3UTR CAA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCATCGAATCCTTCGGCCTaGGGATGGCAAACTGGTCCT +
Preference number: 5 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPSNPSA*GWQTGP
Trigger: AGGACCAGTTTGCCATCCCAAGGCCGAAGGATTCGA...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372584.5
CDS-3UTR CAA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACTTGAGGCTGCTGGGTTaGTGCCTCGAATCCTTCGGC +
Preference number: 5 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDLRLLG*CLESFG
Trigger: GCCGAAGGATTCGAGGCACAAACCCAGCAGCCTCAA...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372584.5
CDS-3UTR CAA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGGTGCCCTTGACACTTaGTTCAGGATCCATGACCTT +
Preference number: 5 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAGALDT*FRIHDL
Trigger: AAGGTCATGGATCCTGAACAAAGTGTCAAGGGCACC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGGCTTCCTCTCCTTCTaGTGTGCCTCTTCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: GTGFRELSSPGHTADRSPGFLSF*CASSVG
Trigger: GCCCACAGAAGAGGCACACAAGAAGGAGAGGAAGCC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGGCTTCCTCTCCTTCTaGTGTGCCTCTTCTGTGGGC +
Preference number: 5 (lower is better)
Translates to: LYRGMATPRISTEHVAGIGFLSF*CASSVG
Trigger: GCCCACAGAAGAGGCACACAAGAAGGAGAGGAAGCC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATTGGAGCACGCTGGGCTaGGCACAGGGCCGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDWSTLG*AQGRLQ
Trigger: CTGCAGCCGGCCCTGTGCCAAGCCCAGCGTGCTCCA...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGGTAGAGGCTGGATTTaGGGGACTCCATGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LYRGMATPRISTEHVAGIGRGWI*GTPCCC
Trigger: GCAGCAGCATGGAGTCCCCAAAATCCAGCCTCTACC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCAGGCGGCAGAAGGCATaGAGTGGCTTCTCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTRRQKA*SGFSGE
Trigger: CTCTCCTGAGAAGCCACTCAATGCCTTCTGCCGCCT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGAACCGGACCCTGGCTaGGGAGTCCTTGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWEPDPG*GVLGWK
Trigger: CTTCCAGCCAAGGACTCCCAAGCCAGGGTCCGGTTC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGCTGCGCTGGGGCCATaGGAACTCCTCAGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPAALGP*ELLSLL
Trigger: GAGAAGACTGAGGAGTTCCAATGGCCCCAGCGCAGC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGCAGAATGGGAAACGTaGGGGCTCTGCTCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDAEWET*GLCSEA
Trigger: AGCCTCAGAGCAGAGCCCCAACGTTTCCCATTCTGC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGGGGTGGTGGAACACTaGCAGTGCTTCTGTGTAGGG +
Preference number: 5 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDGVVEH*QCFCVG
Trigger: CCCTACACAGAAGCACTGCAAGTGTTCCACCACCCC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCATGGGAAGTGCCACAGTaGCTGAGCTGCCTTGGGACT +
Preference number: 5 (lower is better)
Translates to: GTGFRELSSPGHTADRSPWEVPQ*LSCLGT
Trigger: AGTCCCAAGGCAGCTCAGCAACTGTGGCACTTCCCA...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGGGGGTTCCTCAAACTaGGGAAGTGCCACAGTTGCT +
Preference number: 5 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPGGSSN*GSATVA
Trigger: AGCAACTGTGGCACTTCCCAAGTTTGAGGAACCCCC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGGTGAAAGGACACGTTaGCTTCCCCCTGCTGTTGAT +
Preference number: 5 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAGERTR*LPPAVD
Trigger: ATCAACAGCAGGGGGAAGCAAACGTGTCCTTTCACC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAGGAGATGAGTCGTTTTaGGTTAGCGAGTGTTTGCGG +
Preference number: 5 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAGDESF*VSECLR
Trigger: CCGCAAACACTCGCTAACCAAAAACGACTCATCTCC...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGGCTGGAAACGTCTGTaGCTGGACACTGGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDGWKRL*LDTGSQ
Trigger: CTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGGCTTGCTGCTTCTCTaGGGGAGGATGAGAGCCCTA +
Preference number: 5 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRGLLLL*GRMRAL
Trigger: TAGGGCTCTCATCCTCCCCAAGAGAAGCAGCAAGCC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCATGTGGAGGCAGCCCTTaGGTGAGATTCTATTTGTGC +
Preference number: 5 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRACGGSP*VRFYLC
Trigger: GCACAAATAGAATCTCACCAAAGGGCTGCCTCCACA...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCAACCCATGCCTCGCTaGTCTTTTCCACTAGGAGTC +
Preference number: 5 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAQPMPR*SFPLGV
Trigger: GACTCCTAGTGGAAAAGACAAGCGAGGCATGGGTTG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS GCA 90 bp TACCCAGACTCAGTACTCCCTTTGCTGCCTGGGCTCAGAAACGCCTaGTCATCGATCACCTTCTTCCTCTCGCTTAAGCGGAGGGCCAGC +
Preference number: 5 (lower is better)
Translates to: YPDSVLPLLPGLRNA*SSITFFLSLKRRAS
Trigger: GCTGGCCCTCCGCTTAAGCGAGAGGAAGAAGGTGATCGATGAGCAGGCGTTTCTGAGCCCAGGCAGCAAAGGGAGTACTGAGTCTGGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp CCTTGGGTTCCACTTCGTCCGAGGGCTTGGAGGCTGTGTCTTTGCTaGTTGGGCCAGGCTCCTCAGAACTGTATTCCCCTCCCAAAGGTA +
Preference number: 5 (lower is better)
Translates to: PWVPLRPRAWRLCLC*LGQAPQNCIPLPKV
Trigger: TACCTTTGGGAGGGGAATACAGTTCTGAGGAGCCTGGCCCAAGCAGCAAAGACACAGCCTCCAAGCCCTCGGACGAAGTGGAACCCAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp GACATGGCCTGGGTGGAGAAGAATTCTGGAGACTGTCCTGGCTCATaGTGCACGAGATGCTGGAAGGAGAAAAGGGAGACTGGTGGGGGC +
Preference number: 5 (lower is better)
Translates to: DMAWVEKNSGDCPGS*CTRCWKEKRETGGG
Trigger: GCCCCCACCAGTCTCCCTTTTCTCCTTCCAGCATCTCGTGCAGCATGAGCCAGGACAGTCTCCAGAATTCTTCTCCACCCAGGCCATGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp TTGCCTCCCGGGGGTCCACCATGTGAGGTGGCCGCAGAGGAAATCTaGGACAATGAGCTTTTGGCAGAGGGTTTACTGGATGAGGGCTGT +
Preference number: 5 (lower is better)
Translates to: LPPGGPPCEVAAEEI*DNELLAEGLLDEGC
Trigger: ACAGCCCTCATCCAGTAAACCCTCTGCCAAAAGCTCATTGTCCCAGATTTCCTCTGCGGCCACCTCACATGGTGGACCCCCGGGAGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp GACAGCATTTCTAGCTCCCTCCTGCCTTGGCCCTGGTTGCCTAAGTaGGATTTCTCTGGCCTCTTCCCATCCTCGGTGCTGGTAAGGACC +
Preference number: 5 (lower is better)
Translates to: DSISSSLLPWPWLPK*DFSGLFPSSVLVRT
Trigger: GGTCCTTACCAGCACCGAGGATGGGAAGAGGCCAGAGAAATCCCACTTAGGCAACCAGGGCCAAGGCAGGAGGGAGCTAGAAATGCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp GGATCTGAGGACAGGCTGGACAGCATTTCTAGCTCCCTCCTGCCTTaGCCCTGGTTGCCTAAGTGGGATTTCTCTGGCCTCTTCCCATCC +
Preference number: 5 (lower is better)
Translates to: GSEDRLDSISSSLLP*PWLPKWDFSGLFPS
Trigger: GGATGGGAAGAGGCCAGAGAAATCCCACTTAGGCAACCAGGGCCAAGGCAGGAGGGAGCTAGAAATGCTGTCCAGCCTGTCCTCAGATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTACCAGAGGGGCGGGCTaGCTTGGCCAGGACCCCGCG +
Preference number: 5 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFTRGAG*LGQDPA
Trigger: CGCGGGGTCCTGGCCAAGCAAGCCCGCCCCTCTGGT...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCATGGAGATCAACGGCCTaGGAGGAGAAATCACGCTCT +
Preference number: 5 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPWRSTA*EEKSRS
Trigger: AGAGCGTGATTTCTCCTCCAAGGCCGTTGATCTCCA...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGCCTTCTTGGTGCCCTaGACACTTTGTTCAGGATCC +
Preference number: 5 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPAFLVP*TLCSGS
Trigger: GGATCCTGAACAAAGTGTCAAGGGCACCAAGAAGGC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAAGGAGATGCTCAGGTTaGCCAGGCGACATGAATGCT +
Preference number: 5 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPRRCSG*PGDMNA
Trigger: AGCATTCATGTCGCCTGGCAAACCTGAGCATCTCCT...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGCATGGGGTCAACCAGTaGCCATGTGGACCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWHGVNQ*PCGPLQ
Trigger: CTGGAGGGGTCCACATGGCAACTGGTTGACCCCATG...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCGACTCAGTACTCCCTTaGCTGCCTGGGCTCAGAAAC +
Preference number: 5 (lower is better)
Translates to: LYRGMATPRISTEHVAGIDSVLP*LPGLRN
Trigger: GTTTCTGAGCCCAGGCAGCAAAGGGAGTACTGAGTC...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGACTCAGTACTCCCTTaGCTGCCTGGGCTCAGAAAC +
Preference number: 5 (lower is better)
Translates to: GTGFRELSSPGHTADRSPDSVLP*LPGLRN
Trigger: GTTTCTGAGCCCAGGCAGCAAAGGGAGTACTGAGTC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCCAAAGGTAATTCGATaGCCGGCTGGCGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRPKVIR*PAGASA
Trigger: TGCTGAAGCGCCAGCCGGCAATCGAATTACCTTTGG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCACTTCGTCCGAGGGCTaGGAGGCTGTGTCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPTSSEG*EAVSLL
Trigger: CAGCAAAGACACAGCCTCCAAGCCCTCGGACGAAGT...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGTAAGCTCGCTTTCCTaGGGTTCCACTTCGTCCGAG +
Preference number: 5 (lower is better)
Translates to: GTGFRELSSPGHTADRSPVSSLS*GSTSSE
Trigger: CTCGGACGAAGTGGAACCCAAGGAAAGCGAGCTTAC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGAACCGGACCCTGGCTaGGGAGTCCTTGGCTGGAAG +
Preference number: 5 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVEPDPG*GVLGWK
Trigger: CTTCCAGCCAAGGACTCCCAAGCCAGGGTCCGGTTC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAACTGGGCCAGAGGTTaGTCTTCCCCTTCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: GTGFRELSSPGHTADRSPNWARG*SSPSKP
Trigger: TGGCTTGGAAGGGGAAGACAAACCTCTGGCCCAGTT...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACAACTGGGCCAGAGGTTaGTCTTCCCCTTCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDNWARG*SSPSKP
Trigger: TGGCTTGGAAGGGGAAGACAAACCTCTGGCCCAGTT...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGGGGGTTCCTCAAACTaGGGAAGTGCCACAGTTGCT +
Preference number: 5 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRGGSSN*GSATVA
Trigger: AGCAACTGTGGCACTTCCCAAGTTTGAGGAACCCCC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
58% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGGTGAAAGGACACGTTaGCTTCCCCCTGCTGTTGAT +
Preference number: 5 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPGERTR*LPPAVD
Trigger: ATCAACAGCAGGGGGAAGCAAACGTGTCCTTTCACC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGAAACCCCCGGAAGGTaGGGGTTGTACAAACTTATG +
Preference number: 5 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAETPGR*GLYKLM
Trigger: CATAAGTTTGTACAACCCCAACCTTCCGGGGGTTTC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGTCTCTTGGCACTTTTaGCTGTGGGCCTTCGACTTC +
Preference number: 5 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPVSWHF*LWAFDF
Trigger: GAAGTCGAAGGCCCACAGCAAAAAGTGCCAAGAGAC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCATGCCTGCTTCTTTGCTaGGGGACCACGGTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: GTGFRELSSPGHTADRSPCLLLC*GTTVFL
Trigger: CAAGAAGACCGTGGTCCCCAAGCAAAGAAGCAGGCA...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCTTGGTTAGCGAGTGTTaGCGGGCTAGTGGTGGACGG +
Preference number: 5 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPLVSEC*RASGGR
Trigger: CCGTCCACCACTAGCCCGCAAACACTCGCTAACCAA...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGGAGATGAGTCGTTTTaGGTTAGCGAGTGTTTGCGG +
Preference number: 5 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAGDESF*VSECLR
Trigger: CCGCAAACACTCGCTAACCAAAAACGACTCATCTCC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp GCCTTGGGACTGGGTGACCAAGATCTGGGAAAGGGTGGTGTACATTaGGCTCCCATAGGACGGCATATTGGTCTGAACACGGACAGGCAC +
Preference number: 5 (lower is better)
Translates to: ALGLGDQDLGKGGVH*APIGRHIGLNTDRH
Trigger: GTGCCTGTCCGTGTTCAGACCAATATGCCGTCCTATGGGAGCGCAATGTACACCACCCTTTCCCAGATCTTGGTCACCCAGTCCCAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp CTGCTTTGCTCTTCACTTAACCCAGAAGGGCCGGGCCCAACCTCATaGACATCTGCACCACATACAGTCGTCCCCTTTGATGGGGGTTCC +
Preference number: 5 (lower is better)
Translates to: LLCSSLNPEGPGPTS*TSAPHTVVPFDGGS
Trigger: GGAACCCCCATCAAAGGGGACGACTGTATGTGGTGCAGATGTGCATGAGGTTGGGCCCGGCCCTTCTGGGTTAAGTGAAGAGCAAAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp CAGATGGATCTGAGGACAGGCTGGACAGCATTTCTAGCTCCCTCCTaGCTTGGCCCTGGTTGCCTAAGTGGGATTTCTCTGGCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: QMDLRTGWTAFLAPS*LGPGCLSGISLASS
Trigger: GGAAGAGGCCAGAGAAATCCCACTTAGGCAACCAGGGCCAAGGCAGGAGGGAGCTAGAAATGCTGTCCAGCCTGTCCTCAGATCCATCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp TTCCTCTCCTTCTTGTGTGCCTCTTCTGTGGGCTTCAAGGAGACCTaGGAAGGACGAGGCACGAAGACTTTGGGGACTCCAGGAAGGTCC +
Preference number: 5 (lower is better)
Translates to: FLSFLCASSVGFKET*EGRGTKTLGTPGRS
Trigger: GGACCTTCCTGGAGTCCCCAAAGTCTTCGTGCCTCGTCCTTCCCAGGTCTCCTTGAAGCCCACAGAAGAGGCACACAAGAAGGAGAGGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp GTTTACTGGATGAGGGCTGTGGTTCTTCGCTCTCCTGTCTTCCCTTaGGGGCAACCTCCAACTCAGATTCTGGAGGCCTGCTCAGAGAGG +
Preference number: 5 (lower is better)
Translates to: VYWMRAVVLRSPVFP*GQPPTQILEACSER
Trigger: CCTCTCTGAGCAGGCCTCCAGAATCTGAGTTGGAGGTTGCCCCCAAGGGAAGACAGGAGAGCGAAGAACCACAGCCCTCATCCAGTAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp GAGGCTGGACATGGCCTGGGTGGAGAAGAATTCTGGAGACTGTCCTaGCTCATGCTGCACGAGATGCTGGAAGGAGAAAAGGGAGACTGG +
Preference number: 5 (lower is better)
Translates to: EAGHGLGGEEFWRLS*LMLHEMLEGEKGDW
Trigger: CCAGTCTCCCTTTTCTCCTTCCAGCATCTCGTGCAGCATGAGCCAGGACAGTCTCCAGAATTCTTCTCCACCCAGGCCATGTCCAGCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCCCCTTTAGTTCTGGGTaGGAGATCAACGGCCTTGGA +
Preference number: 5 (lower is better)
Translates to: LYRGMATPRISTEHVAGIPFSSG*EINGLG
Trigger: TCCAAGGCCGTTGATCTCCAACCCAGAACTAAAGGG...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCGTGCTATGCAAACGGTaGAAGGTTGGAGACATCTGT +
Preference number: 5 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAVLCKR*KVGDIC
Trigger: ACAGATGTCTCCAACCTTCAACCGTTTGCATAGCAC...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAGCATGGCCCTCTACTTaGCAGACAGAAAACGCACCA +
Preference number: 5 (lower is better)
Translates to: GTGFRELSSPGHTADRSPAWPST*QTENAP
Trigger: TGGTGCGTTTTCTGTCTGCAAAGTAGAGGGCCATGC...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGCCCACGCTATTCTATaGGTGAGGCATGGCCCTCTA +
Preference number: 5 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGAHAIL*VRHGPL
Trigger: TAGAGGGCCATGCCTCACCAATAGAATAGCGTGGGC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCGCCTTCTTGGTGCCCTaGACACTTTGTTCAGGATCC +
Preference number: 5 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTAFLVP*TLCSGS
Trigger: GGATCCTGAACAAAGTGTCAAGGGCACCAAGAAGGC...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGAGGAGATGCTCAGGTTaGCCAGGCGACATGAATGCT +
Preference number: 5 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRRRCSG*PGDMNA
Trigger: AGCATTCATGTCGCCTGGCAAACCTGAGCATCTCCT...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCTGGAGCACGCTGGGCTaGGCACAGGGCCGGCTGCAG +
Preference number: 5 (lower is better)
Translates to: RHWLTLIALENSNELGQFWSTLG*AQGRLQ
Trigger: CTGCAGCCGGCCCTGTGCCAAGCCCAGCGTGCTCCA...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCCTATTCGCCCACACTaGCCAAAGATGATCTCAGCG +
Preference number: 5 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTPIRPH*PKMISA
Trigger: CGCTGAGATCATCTTTGGCAAGTGTGGGCGAATAGG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAAGTGATTGTTCAGGCTaGGTTTTCTCACTGTGGGAT +
Preference number: 5 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRASDCSG*VFSLWD
Trigger: ATCCCACAGTGAGAAAACCAAGCCTGAACAATCACT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCCCTTCTTGGTCTTTTaGGTAAGCTCGCTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: GWWHWFCPSGHGINVEAAPFLVF*VSSLSL
Trigger: CAAGGAAAGCGAGCTTACCAAAAAGACCAAGAAGGG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCTGCCAAACTGACTTTTaGTGGACTCAAAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: GWWHWFCPSGHGINVEAACQTDF*WTQRQV
Trigger: CACCTGCCTTTGAGTCCACAAAAAGTCAGTTTGGCA...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATCTGGCTTGGGAGTCCTaGGCTGGAAGCCCGTGGGTC +
Preference number: 5 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDLAWES*AGSPWV
Trigger: GACCCACGGGCTTCCAGCCAAGGACTCCCAAGCCAG...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCGCAACCTCTTCTTTTaGGGTGGCAGCTTCTCAGCT +
Preference number: 5 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDRNLFF*GGSFSA
Trigger: AGCTGAGAAGCTGCCACCCAAAAAGAAGAGGTTGCG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCATGGGTGCCCAGGGGTTaGGGGCGCATGTCAGATGAG +
Preference number: 5 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSWVPRG*GRMSDE
Trigger: CTCATCTGACATGCGCCCCAAACCCCTGGGCACCCA...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGAAAGGGTGGTGTACATaGCGCTCCCATAGGACGGCA +
Preference number: 5 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGKGWCT*RSHRTA
Trigger: TGCCGTCCTATGGGAGCGCAATGTACACCACCCTTT...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCTCCTTCACTCTTTTTaGCTGCTGGGTTTCCATGGT +
Preference number: 5 (lower is better)
Translates to: GWWHWFCPSGHGINVEAALLHSF*LLGFHG
Trigger: ACCATGGAAACCCAGCAGCAAAAAAGAGTGAAGGAG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGGTACCTTCTTGTGACTaGGCTGGTCTGGAGGACGTT +
Preference number: 5 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRVPSCD*AGLEDV
Trigger: AACGTCCTCCAGACCAGCCAAGTCACAAGAAGGTAC...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACGTACCTTCTTGTGACTaGGCTGGTCTGGAGGACGTT +
Preference number: 5 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDVPSCD*AGLEDV
Trigger: AACGTCCTCCAGACCAGCCAAGTCACAAGAAGGTAC...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATCTGTCATGCGGGGCTaGCGGGAGCTGGATGGCACA +
Preference number: 5 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTSVMRG*RELDGT
Trigger: TGTGCCATCCAGCTCCCGCAAGCCCCGCATGACAGA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCAGGAGATGAGTCGTTTTaGGTTAGCGAGTGTTTGCGG +
Preference number: 5 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPGDESF*VSECLR
Trigger: CCGCAAACACTCGCTAACCAAAAACGACTCATCTCC...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGAGACAGCTGAAGTCTaGGAGACCCACAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPETAEV*ETHKGE
Trigger: CTCTCCCTTGTGGGTCTCCAAGACTTCAGCTGTCTC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCGTGGTACCCTCGAGTTaGGAGAGCACATGTGCTCGA +
Preference number: 5 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPVVPSS*ESTCAR
Trigger: TCGAGCACATGTGCTCTCCAAACTCGAGGGTACCAC...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCATCCACCAGCCACAGTaGTGGGTATTTCCTTGGGGT +
Preference number: 5 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTIHQPQ*WVFPWG
Trigger: ACCCCAAGGAAATACCCACAACTGTGGCTGGTGGAT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGGGAGGCCTTCGGCCTaGGGATGGCAAACTGGTCCT +
Preference number: 5 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSGRPSA*GWQTGP
Trigger: AGGACCAGTTTGCCATCCCAAGGCCGAAGGCCTCCC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS TCA 90 bp GAGTGGACTCGGAGCAGGTCATCAGGGCCCACGCTATTCTATTGGTaGGGCATGGCCCTCTACTTTGCAGACAGAAAACGCACCAGCACT +
Preference number: 5 (lower is better)
Translates to: EWTRSRSSGPTLFYW*GMALYFADRKRTST
Trigger: AGTGCTGGTGCGTTTTCTGTCTGCAAAGTAGAGGGCCATGCCTCACCAATAGAATAGCGTGGGCCCTGATGACCTGCTCCGAGTCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp CAAACTTGGGAAGTGCCACAGTTGCTGAGCTGCCTTGGGACTGGGTaGCCAAGATCTGGGAAAGGGTGGTGTACATTGCGCTCCCATAGG +
Preference number: 5 (lower is better)
Translates to: QTWEVPQLLSCLGTG*PRSGKGWCTLRSHR
Trigger: CCTATGGGAGCGCAATGTACACCACCCTTTCCCAGATCTTGGTCACCCAGTCCCAAGGCAGCTCAGCAACTGTGGCACTTCCCAAGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp AAGCACCAAACTAGGCAGCTGGATAATGGGAGAGTCGGCTGGTTGTaGGCATGCTCGCGCCGGGAACAGATCCACCCTCTGTTATTCCTC +
Preference number: 5 (lower is better)
Translates to: KHQTRQLDNGRVGWL*ACSRREQIHPLLFL
Trigger: GAGGAATAACAGAGGGTGGATCTGTTCCCGGCGCGAGCATGCTCACAACCAGCCGACTCTCCCATTATCCAGCTGCCTAGTTTGGTGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS GCA 90 bp CTGCACTCTCGGAGCGAGAGAAATACCCAGACTCAGTACTCCCTTTaGTGCCTGGGCTCAGAAACGCCTGCTCATCGATCACCTTCTTCC +
Preference number: 5 (lower is better)
Translates to: LHSRSERNTQTQYSL*CLGSETPAHRSPSS
Trigger: GGAAGAAGGTGATCGATGAGCAGGCGTTTCTGAGCCCAGGCAGCAAAGGGAGTACTGAGTCTGGGTATTTCTCTCGCTCCGAGAGTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp GGGAACTGGGCCAGAGGTTTGTCTTCCCCTTCCAAGCCACTCGGCTaGTCGAGAGAATCAGATTTCTCAAAGGAGCTGGTGTGCTGGATG +
Preference number: 5 (lower is better)
Translates to: GNWARGLSSPSKPLG*SRESDFSKELVCWM
Trigger: CATCCAGCACACCAGCTCCTTTGAGAAATCTGATTCTCTCGAGCAGCCGAGTGGCTTGGAAGGGGAAGACAAACCTCTGGCCCAGTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp GAGCAGAAGGGCCTGTCAAGGACAAGCTGCCATAGTCAAAGGATTTaGTGCGTGTCTCGGTCATGTGGGCAGAATGGGAAACGTTGGGGC +
Preference number: 5 (lower is better)
Translates to: EQKGLSRTSCHSQRI*CVSRSCGQNGKRWG
Trigger: GCCCCAACGTTTCCCATTCTGCCCACATGACCGAGACACGCAGCAAATCCTTTGACTATGGCAGCTTGTCCTTGACAGGCCCTTCTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp CACGCTGGATGCTGGGGGTGGCTCTTCTCCCCTTTAGTTCTGGGTTaGAGATCAACGGCCTTGGAGGAGAAATCACGCTCTTCTTCTGTG +
Preference number: 5 (lower is better)
Translates to: HAGCWGWLFSPLVLG*RSTALEEKSRSSSV
Trigger: CACAGAAGAAGAGCGTGATTTCTCCTCCAAGGCCGTTGATCTCCAACCCAGAACTAAAGGGGAGAAGAGCCACCCCCAGCATCCAGCGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp CTCGGAGCAGGTCATCAGGGCCCACGCTATTCTATTGGTGAGGCATaGCCCTCTACTTTGCAGACAGAAAACGCACCAGCACTTTCTGCC +
Preference number: 5 (lower is better)
Translates to: LGAGHQGPRYSIGEA*PSTLQTENAPALSA
Trigger: GGCAGAAAGTGCTGGTGCGTTTTCTGTCTGCAAAGTAGAGGGCCATGCCTCACCAATAGAATAGCGTGGGCCCTGATGACCTGCTCCGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp CTCGGAGCGAGAGAAATACCCAGACTCAGTACTCCCTTTGCTGCCTaGGCTCAGAAACGCCTGCTCATCGATCACCTTCTTCCTCTCGCT +
Preference number: 5 (lower is better)
Translates to: LGAREIPRLSTPFAA*AQKRLLIDHLLPLA
Trigger: AGCGAGAGGAAGAAGGTGATCGATGAGCAGGCGTTTCTGAGCCCAGGCAGCAAAGGGAGTACTGAGTCTGGGTATTTCTCTCGCTCCGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp CCGCAGAGGAAATCTGGGACAATGAGCTTTTGGCAGAGGGTTTACTaGATGAGGGCTGTGGTTCTTCGCTCTCCTGTCTTCCCTTGGGGG +
Preference number: 5 (lower is better)
Translates to: PQRKSGTMSFWQRVY*MRAVVLRSPVFPWG
Trigger: CCCCCAAGGGAAGACAGGAGAGCGAAGAACCACAGCCCTCATCCAGTAAACCCTCTGCCAAAAGCTCATTGTCCCAGATTTCCTCTGCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp TCTGGGAAAGGGTGGTGTACATTGCGCTCCCATAGGACGGCATATTaGTCTGAACACGGACAGGCACAACCAGGGACACCATGGTGTCTG +
Preference number: 5 (lower is better)
Translates to: SGKGWCTLRSHRTAY*SEHGQAQPGTPWCL
Trigger: CAGACACCATGGTGTCCCTGGTTGTGCCTGTCCGTGTTCAGACCAATATGCCGTCCTATGGGAGCGCAATGTACACCACCCTTTCCCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp GGAGGGGAGGAATTTCCTTTGTGTCAGATGGATCTGAGGACAGGCTaGACAGCATTTCTAGCTCCCTCCTGCCTTGGCCCTGGTTGCCTA +
Preference number: 5 (lower is better)
Translates to: GGEEFPLCQMDLRTG*TAFLAPSCLGPGCL
Trigger: TAGGCAACCAGGGCCAAGGCAGGAGGGAGCTAGAAATGCTGTCCAGCCTGTCCTCAGATCCATCTGACACAAAGGAAATTCCTCCCCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp GCAGAGAGCTCGGAGGTGCCAAGGAGGGGAGATCAGGTTGTTCCTTaGAATCTTCTTTCTTCACGCTCAGTGGGGTCAACCCTCTTCGGT +
Preference number: 5 (lower is better)
Translates to: AESSEVPRRGDQVVP*NLLSSRSVGSTLFG
Trigger: ACCGAAGAGGGTTGACCCCACTGAGCGTGAAGAAAGAAGATTCCAAGGAACAACCTGATCTCCCCTCCTTGGCACCTCCGAGCTCTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACATGGGGTCAACCAGTaGCCATGTGGACCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTHGVNQ*PCGPLQ
Trigger: CTGGAGGGGTCCACATGGCAACTGGTTGACCCCATG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGTACTGGCAGATGTACTaGCCTGGCTTCTGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWYWQMY*PGFWGF
Trigger: GAAGCCCCAGAAGCCAGGCAAGTACATCTGCCAGTA...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGATTACTCTTGGTCTaGAAGGAGAAGCCACAGGGG +
Preference number: 5 (lower is better)
Translates to: GTGFRELSSPGHTADRSPRLLLV*KEKPQG
Trigger: CCCCTGTGGCTTCTCCTTCAAGACCAAGAGTAATCT...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGCTGGTGGCATTGGTTCTGTCCCTCTGGGCACGGCATCAATGTGGAGGCAGCCCGTAGATCACCCCTTTaGTTTTCAAACCCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: GWWHWFCPSGHGINVEAARRSPL*FSNPSW
Trigger: CCAAGAAGGGTTTGAAAACAAAAGGGGTGATCTACG...GGCTGCCTCCACATTGATGCCGTGCCCAGAGGGACAGAACCAATGCCACCAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCACCCCGCGCAATGACAGAAATTTCTTaGGACGTTGTTCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: AHTQGPGLVCTEEWPPRAMTEIS*DVVLLS
Trigger: GGAGAGGAGAACAACGTCCAAAGAAATTTCTGTCAT...TGCGCGGGGTGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGCTGCGCTGGGGCCATaGGAACTCCTCAGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSAALGP*ELLSLL
Trigger: GAGAAGACTGAGGAGTTCCAATGGCCCCAGCGCAGC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATTGGGTGCCCAGGGGTTaGGGGCGCATGTCAGATGAG +
Preference number: 5 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDWVPRG*GRMSDE
Trigger: CTCATCTGACATGCGCCCCAAACCCCTGGGCACCCA...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCAAGTGCAAACTGGGATaGCAGAGGCAGGAAAAACCC +
Preference number: 5 (lower is better)
Translates to: LYRGMATPRISTEHVAGIKCKLG*QRQEKP
Trigger: GGGTTTTTCCTGCCTCTGCAATCCCAGTTTGCACTT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGGCCAGCACTTCCTGTaGCCAGTGGGGCCAGGCTGG +
Preference number: 5 (lower is better)
Translates to: RHWLTLIALENSNELGQFGQHFL*PVGPGW
Trigger: CCAGCCTGGCCCCACTGGCAACAGGAAGTGCTGGCC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCATACAGTCGTCCCCTTaGATGGGGGTTCCTCAAACT +
Preference number: 5 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTIQSSP*MGVPQT
Trigger: AGTTTGAGGAACCCCCATCAAAGGGGACGACTGTAT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCCTCTCAGGTATGGAGTaGGGAAAGCTCTGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: LYRGMATPRISTEHVAGILSGME*GKLCFA
Trigger: AGCAAAGCAGAGCTTTCCCAACTCCATACCTGAGAG...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTTGCTTCCCCCTGCTGTaGATGAACTCCCCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGCFPLL*MNSPPG
Trigger: GCCTGGAGGGGAGTTCATCAACAGCAGGGGGAAGCA...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGTACCTTCTTGTGACTaGGCTGGTCTGGAGGACGTT +
Preference number: 5 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGVPSCD*AGLEDV
Trigger: AACGTCCTCCAGACCAGCCAAGTCACAAGAAGGTAC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACCCCGGAAGGTTGGGGTaGTACAAACTTATGCACCAA +
Preference number: 5 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDPGRLG*YKLMHQ
Trigger: TTGGTGCATAAGTTTGTACAACCCCAACCTTCCGGG...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACGGCTGCCTGCTTCTTaGCTTGGGGACCACGGTCTT +
Preference number: 5 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTRLPAS*LGDHGL
Trigger: AAGACCGTGGTCCCCAAGCAAAGAAGCAGGCAGCCG...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGAGACAGCTGAAGTCTaGGAGACCCACAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWETAEV*ETHKGE
Trigger: CTCTCCCTTGTGGGTCTCCAAGACTTCAGCTGTCTC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCCCCCACTGCCCACACCCAAGGACCAGGACTAGTCTGTACCGAGGAATGGCCATTACAAAGTAGAGTTTaGCCCCAGGAAATGCAGGGC +
Preference number: 5 (lower is better)
Translates to: SPTAHTQGPGLVCTEEWPLQSRV*PQEMQG
Trigger: GCCCTGCATTTCCTGGGGCAAAACTCTACTTTGTAA...TGGCCATTCCTCGGTACAGACTAGTCCTGGTCCTTGGGTGTGGGCAGTGGGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCTGGCCTCCTGGGACTaGGAGGAGTCACTTTCTGTC +
Preference number: 5 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVLASWD*EESLSV
Trigger: GACAGAAAGTGACTCCTCCAAGTCCCAGGAGGCCAG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGTGGGGCAGGAAGAGCTaGCCCAGGCAGATTTCTAAC +
Preference number: 5 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWWGRKS*PRQISN
Trigger: GTTAGAAATCTGCCTGGGCAAGCTCTTCCTGCCCCA...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATCGGCTGCACTGTTCATaGCTAGGCTGCCCAGGGAGG +
Preference number: 5 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDRLHCS*LGCPGR
Trigger: CCTCCCTGGGCAGCCTAGCAATGAACAGTGCAGCCG...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCCCCATCCCAGTGCGGTaGCTGTACATATCTACAGTA +
Preference number: 5 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTPIPVR*LYISTV
Trigger: TACTGTAGATATGTACAGCAACCGCACTGGGATGGG...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp TGCTGTCCTCCATTCAGTGGGTTCTGGATGGATTGCCAGATGATGTaGAGGGCTCTTGGTCATGGCTGGTACTTCTACCCTTCGTGGGCC +
Preference number: 5 (lower is better)
Translates to: CCPPFSGFWMDCQMM*RALGHGWYFYPSWA
Trigger: GGCCCACGAAGGGTAGAAGTACCAGCCATGACCAAGAGCCCTTCACATCATCTGGCAATCCATCCAGAACCCACTGAATGGAGGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS GCA 90 bp TCATCGATCACCTTCTTCCTCTCGCTTAAGCGGAGGGCCAGCTTCTaGTTAATCGTGTGGGTGTCTTCAGGTTTATGGCTCAGGGGGTGC +
Preference number: 5 (lower is better)
Translates to: SSITFFLSLKRRASF*LIVWVSSGLWLRGC
Trigger: GCACCCCCTGAGCCATAAACCTGAAGACACCCACACGATTAAGCAGAAGCTGGCCCTCCGCTTAAGCGAGAGGAAGAAGGTGATCGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp CACTCTCGGAGCGAGAGAAATACCCAGACTCAGTACTCCCTTTGCTaGCTGGGCTCAGAAACGCCTGCTCATCGATCACCTTCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: HSRSERNTQTQYSLC*LGSETPAHRSPSSS
Trigger: AGAGGAAGAAGGTGATCGATGAGCAGGCGTTTCTGAGCCCAGGCAGCAAAGGGAGTACTGAGTCTGGGTATTTCTCTCGCTCCGAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp CTTCTTTCTTCACGCTCAGTGGGGTCAACCCTCTTCGGTGAGGTTTaGCAGATGGCTGGGGATATTCCTTCAAAGCTTCTGAGCCTGGGG +
Preference number: 5 (lower is better)
Translates to: LLSSRSVGSTLFGEV*QMAGDIPSKLLSLG
Trigger: CCCCAGGCTCAGAAGCTTTGAAGGAATATCCCCAGCCATCTGGCAAACCTCACCGAAGAGGGTTGACCCCACTGAGCGTGAAGAAAGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp GGATGTCAGTATTGCCATTGTATTGTTTCAGCTGGCAGTGGCAGGTaGCCCCCACGAGTCCCCCGTGTGCTATGCAAACGGTTGAAGGTT +
Preference number: 5 (lower is better)
Translates to: GCQYCHCIVSAGSGR*PPRVPRVLCKRLKV
Trigger: AACCTTCAACCGTTTGCATAGCACACGGGGGACTCGTGGGGGCCACCTGCCACTGCCAGCTGAAACAATACAATGGCAATACTGACATCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp TTCTTCCTCTCGCTTAAGCGGAGGGCCAGCTTCTGCTTAATCGTGTaGGTGTCTTCAGGTTTATGGCTCAGGGGGTGCTCAGATGAGGGT +
Preference number: 5 (lower is better)
Translates to: FFLSLKRRASFCLIV*VSSGLWLRGCSDEG
Trigger: ACCCTCATCTGAGCACCCCCTGAGCCATAAACCTGAAGACACCCACACGATTAAGCAGAAGCTGGCCCTCCGCTTAAGCGAGAGGAAGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp TTCGCTCTCCTGTCTTCCCTTGGGGGCAACCTCCAACTCAGATTCTaGAGGCCTGCTCAGAGAGGCCTGTCTCACCAAGAAGCATTTTCT +
Preference number: 5 (lower is better)
Translates to: FALLSSLGGNLQLRF*RPAQRGLSHQEAFS
Trigger: AGAAAATGCTTCTTGGTGAGACAGGCCTCTCTGAGCAGGCCTCCAGAATCTGAGTTGGAGGTTGCCCCCAAGGGAAGACAGGAGAGCGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp GGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTaGAAGCCAGATGCTGAAGCAGTTGGAGAGAGGCTAAGCGTTGGG +
Preference number: 5 (lower is better)
Translates to: GMIRGKWLETSVAGH*KPDAEAVGERLSVG
Trigger: CCCAACGCTTAGCCTCTCTCCAACTGCTTCAGCATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 90 bp TTCTTCAGGACGTTTGTCCCTCGACTGGACAAGATCCAGCAGGAGTaGGCAACACAGGAACAAATCCGAGACACCAGACTTCGGCCTTGG +
Preference number: 5 (lower is better)
Translates to: FFRTFVPRLDKIQQE*ATQEQIRDTRLRPW
Trigger: CCAAGGCCGAAGTCTGGTGTCTCGGATTTGTTCCTGTGTTGCCCACTCCTGCTGGATCTTGTCCAGTCGAGGGACAAACGTCCTGAAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489103.5
ENST00000491442.5
CDS-3UTR CAA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCATCCACCACGGCCTCGTaGATGGTGATGAGCTTCGTG +
Preference number: 5 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSSTTAS*MVMSFV
Trigger: CACGAAGCTCATCACCATCAACGAGGCCGTGGTGGA...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAACAGTGAGCTCCGCCTaGGCTTCACGCTGTCGATCT +
Preference number: 5 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTTVSSA*ASRCRS
Trigger: AGATCGACAGCGTGAAGCCAAGGCGGAGCTCACTGT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGGTAGAGGCTGGATTTaGGGGACTCCATGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTGRGWI*GTPCCC
Trigger: GCAGCAGCATGGAGTCCCCAAAATCCAGCCTCTACC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACCCTTCTTGGTCTTTTaGGTAAGCTCGCTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: GTGFRELSSPGHTADRSPPFLVF*VSSLSL
Trigger: CAAGGAAAGCGAGCTTACCAAAAAGACCAAGAAGGG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCTGCAGAGATGGGCTTaGCGATCTGAAGCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVLQRWA*RSEALS
Trigger: GCTCAGAGCTTCAGATCGCAAAGCCCATCTCTGCAG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACTTTGTAATGCATCATTaGGGACCACGGCTCATGCTC +
Preference number: 5 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDFVMHH*GPRLML
Trigger: GAGCATGAGCCGTGGTCCCAAATGATGCATTACAAA...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTTTGTAATGCATCATTaGGGACCACGGCTCATGCTC +
Preference number: 5 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTFVMHH*GPRLML
Trigger: GAGCATGAGCCGTGGTCCCAAATGATGCATTACAAA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGAGGGCACTGATTTACTaGGTTCTGCTGGTGACTTGG +
Preference number: 5 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGRALIY*VLLVTW
Trigger: CCAAGTCACCAGCAGAACCAAGTAAATCAGTGCCCT...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCATGGGAAGTGCCACAGTaGCTGAGCTGCCTTGGGACT +
Preference number: 5 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSWEVPQ*LSCLGT
Trigger: AGTCCCAAGGCAGCTCAGCAACTGTGGCACTTCCCA...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGCTCCTTCACTCTTTTTaGCTGCTGGGTTTCCATGGT +
Preference number: 5 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRLLHSF*LLGFHG
Trigger: ACCATGGAAACCCAGCAGCAAAAAAGAGTGAAGGAG...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGCCCGGAAGGTTGGGGTaGTACAAACTTATGCACCAA +
Preference number: 5 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGPGRLG*YKLMHQ
Trigger: TTGGTGCATAAGTTTGTACAACCCCAACCTTCCGGG...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGGAAACCCCCGGAAGGTaGGGGTTGTACAAACTTATG +
Preference number: 5 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGETPGR*GLYKLM
Trigger: CATAAGTTTGTACAACCCCAACCTTCCGGGGGTTTC...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGGGACCACGGTCTTCTaGGGGACACAGGCTTGTAGC +
Preference number: 5 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDGTTVF*GTQACS
Trigger: GCTACAAGCCTGTGTCCCCAAGAAGACCGTGGTCCC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTTACAAAGTAGAGTTTaGCCCCAGGAAATGCAGGGC +
Preference number: 5 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRLQSRV*PQEMQG
Trigger: GCCCTGCATTTCCTGGGGCAAAACTCTACTTTGTAA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGGCTTGCTGCTTCTCTaGGGGAGGATGAGAGCCCTA +
Preference number: 5 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTGLLLL*GRMRAL
Trigger: TAGGGCTCTCATCCTCCCCAAGAGAAGCAGCAAGCC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACTGGCCTCCTGGGACTaGGAGGAGTCACTTTCTGTC +
Preference number: 5 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSLASWD*EESLSV
Trigger: GACAGAAAGTGACTCCTCCAAGTCCCAGGAGGCCAG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCTGTGGAGGCAGCCCTTaGGTGAGATTCTATTTGTGC +
Preference number: 5 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPCGGSP*VRFYLC
Trigger: GCACAAATAGAATCTCACCAAAGGGCTGCCTCCACA...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ACAAGGTGGTCTGGCTGCAGGCTGGACTGTGGCTGGTTTGTCTGTCTAGTAGGGAACACAGAAGCAGAATaGGTGGAACAGGCTTTCGGG +
Preference number: 5 (lower is better)
Translates to: TRWSGCRLDCGWFVCLVGNTEAE*VEQAFG
Trigger: CCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTT...CCCTACTAGACAGACAAACCAGCCACAGTCCAGCCTGCAGCCAGACCACCTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCCCCATCCCAGTGCGGTaGCTGTACATATCTACAGTA +
Preference number: 5 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPPIPVR*LYISTV
Trigger: TACTGTAGATATGTACAGCAACCGCACTGGGATGGG...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp CAGGTAATGTCACAGGCACTCTCAGGTATGGAGTTGGGAAAGCTCTaGTTTGCTCTTCACTTAACCCAGAAGGGCCGGGCCCAACCTCAT +
Preference number: 5 (lower is better)
Translates to: QVMSQALSGMELGKL*FALHLTQKGRAQPH
Trigger: ATGAGGTTGGGCCCGGCCCTTCTGGGTTAAGTGAAGAGCAAAGCAGAGCTTTCCCAACTCCATACCTGAGAGTGCCTGTGACATTACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp GGATGCGGAGCTGTGGCCATGGTGTATGTCTCTTTGCTCACTTTCTaGTTAGACCTCAGGAGGGACAAAGCAGCTTTAGTGGAAACCCCC +
Preference number: 5 (lower is better)
Translates to: GCGAVAMVYVSLLTF*LDLRRDKAALVETP
Trigger: GGGGGTTTCCACTAAAGCTGCTTTGTCCCTCCTGAGGTCTAAGCAGAAAGTGAGCAAAGAGACATACACCATGGCCACAGCTCCGCATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 90 bp CTCTGGCCTCTTCCCATCCTCGGTGCTGGTAAGGACCACACTGCATaGTTTTACCAGCTCAAGTTTTTCATCTGCCTTGGAAGCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LWPLPILGAGKDHTA*FYQLKFFICLGSLL
Trigger: GAGGAGGCTTCCAAGGCAGATGAAAAACTTGAGCTGGTAAAACCATGCAGTGTGGTCCTTACCAGCACCGAGGATGGGAAGAGGCCAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp GGGGAGATCAGGTTGTTCCTTGGAATCTTCTTTCTTCACGCTCAGTaGGGTCAACCCTCTTCGGTGAGGTTTGCCAGATGGCTGGGGATA +
Preference number: 5 (lower is better)
Translates to: GEIRLFLGIFFLHAQ*GQPSSVRFARWLGI
Trigger: TATCCCCAGCCATCTGGCAAACCTCACCGAAGAGGGTTGACCCCACTGAGCGTGAAGAAAGAAGATTCCAAGGAACAACCTGATCTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp CAGCCGTGGTCTCATGGTCAAGATGTGTCAGAGATTTCTAGAGCTTaGAGAACTGTGTTGGAGGGAGGCCTTCGGCCTTGGGATGGCAAA +
Preference number: 5 (lower is better)
Translates to: QPWSHGQDVSEISRA*RTVLEGGLRPWDGK
Trigger: TTTGCCATCCCAAGGCCGAAGGCCTCCCTCCAACACAGTTCTCCAAGCTCTAGAAATCTCTGACACATCTTGACCATGAGACCACGGCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS-3UTR CAA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCAGTATTGCCATTGTATaGTTTCAGCTGGCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: LYRGMATPRISTEHVAGISIAIV*FQLAVA
Trigger: TGCCACTGCCAGCTGAAACAATACAATGGCAATACT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGCATGGCCCTCTACTTaGCAGACAGAAAACGCACCA +
Preference number: 5 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVAWPST*QTENAP
Trigger: TGGTGCGTTTTCTGTCTGCAAAGTAGAGGGCCATGC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGACTCAGTACTCCCTTaGCTGCCTGGGCTCAGAAAC +
Preference number: 5 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSDSVLP*LPGLRN
Trigger: GTTTCTGAGCCCAGGCAGCAAAGGGAGTACTGAGTC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGCCTATTCGCCCACACTaGCCAAAGATGATCTCAGCG +
Preference number: 5 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVPIRPH*PKMISA
Trigger: CGCTGAGATCATCTTTGGCAAGTGTGGGCGAATAGG...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCCAAAGGTAATTCGATaGCCGGCTGGCGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGPKVIR*PAGASA
Trigger: TGCTGAAGCGCCAGCCGGCAATCGAATTACCTTTGG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATACTTCGTCCGAGGGCTaGGAGGCTGTGTCTTTGCTG +
Preference number: 5 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDTSSEG*EAVSLL
Trigger: CAGCAAAGACACAGCCTCCAAGCCCTCGGACGAAGT...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGTAAGCTCGCTTTCCTaGGGTTCCACTTCGTCCGAG +
Preference number: 5 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTVSSLS*GSTSSE
Trigger: CTCGGACGAAGTGGAACCCAAGGAAAGCGAGCTTAC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCACGTAGATCACCCCTTTaGTTTTCAAACCCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: GTGFRELSSPGHTADRSPRRSPL*FSNPSW
Trigger: CCAAGAAGGGTTTGAAAACAAAAGGGGTGATCTACG...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCTGCAGAGATGGGCTTaGCGATCTGAAGCTCTGAGC +
Preference number: 5 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGLQRWA*RSEALS
Trigger: GCTCAGAGCTTCAGATCGCAAAGCCCATCTCTGCAG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCTGCCAAACTGACTTTTaGTGGACTCAAAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPCQTDF*WTQRQV
Trigger: CACCTGCCTTTGAGTCCACAAAAAGTCAGTTTGGCA...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCAAATTTCTTTGGACGTaGTTCTCCTCTCCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: LYRGMATPRISTEHVAGIKFLWT*FSSPSL
Trigger: CAGGGAAGGAGAGGAGAACAACGTCCAAAGAAATTT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAAAAGGGTGGTGTACATaGCGCTCCCATAGGACGGCA +
Preference number: 5 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSKGWCT*RSHRTA
Trigger: TGCCGTCCTATGGGAGCGCAATGTACACCACCCTTT...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCTCTGTCATGCGGGGCTaGCGGGAGCTGGATGGCACA +
Preference number: 5 (lower is better)
Translates to: RHWLTLIALENSNELGQFSVMRG*RELDGT
Trigger: TGTGCCATCCAGCTCCCGCAAGCCCCGCATGACAGA...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTCTGTCATGCGGGGCTaGCGGGAGCTGGATGGCACA +
Preference number: 5 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFSVMRG*RELDGT
Trigger: TGTGCCATCCAGCTCCCGCAAGCCCCGCATGACAGA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGAGACAGCTGAAGTCTaGGAGACCCACAAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGETAEV*ETHKGE
Trigger: CTCTCCCTTGTGGGTCTCCAAGACTTCAGCTGTCTC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGTGGTACCCTCGAGTTaGGAGAGCACATGTGCTCGA +
Preference number: 5 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSVVPSS*ESTCAR
Trigger: TCGAGCACATGTGCTCTCCAAACTCGAGGGTACCAC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGGCCTTTGTGGGTGGTTaGGTGGTTTTAGAACAGAGG +
Preference number: 5 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWAFVGG*VVLEQR
Trigger: CCTCTGTTCTAAAACCACCAAACCACCCACAAAGGC...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGGGAAAGGCCACGAATaGGAAGAGGCAAGTACAGCC +
Preference number: 5 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGGKGHE*EEASTA
Trigger: GGCTGTACTTGCCTCTTCCAATTCGTGGCCTTTCCC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACTCCAGCTCAGATGTATaGCTCATTCCTCTTCAGAAG +
Preference number: 5 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDSSSDV*LIPLQK
Trigger: CTTCTGAAGAGGAATGAGCAATACATCTGAGCTGGA...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TTTGGCTCTGAAACCTCGACCAGTTGGTTCCTCCCCCACTGCCCACACCCAAGGTCCAGCTCAGATGTATaGCTCATTCCTCTTCAGAAG +
Preference number: 5 (lower is better)
Translates to: FGSETSTSWFLPHCPHPRSSSDV*LIPLQK
Trigger: CTTCTGAAGAGGAATGAGCAATACATCTGAGCTGGA...CCTTGGGTGTGGGCAGTGGGGGAGGAACCAACTGGTCGAGGTTTCAGAGCCAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATTGAGGCTGCTGGGTTaGTGCCTCGAATCCTGCCAA +
Preference number: 5 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTLRLLG*CLESCQ
Trigger: TTGGCAGGATTCGAGGCACAAACCCAGCAGCCTCAA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS GCA 90 bp CTGCCTGAATGTCTGTCGGGAAAACGTCATGAAGGATGTCAGTATTaGCATTGTATTGTTTCAGCTGGCAGTGGCAGGTGGCCCCCACGA +
Preference number: 5 (lower is better)
Translates to: LPECLSGKRHEGCQY*HCIVSAGSGRWPPR
Trigger: TCGTGGGGGCCACCTGCCACTGCCAGCTGAAACAATACAATGGCAATACTGACATCCTTCATGACGTTTTCCCGACAGACATTCAGGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp ATCAGGGCCCACGCTATTCTATTGGTGAGGCATGGCCCTCTACTTTaGAGACAGAAAACGCACCAGCACTTTCTGCCTGAATGTCTGTCG +
Preference number: 5 (lower is better)
Translates to: IRAHAILLVRHGPLL*RQKTHQHFLPECLS
Trigger: CGACAGACATTCAGGCAGAAAGTGCTGGTGCGTTTTCTGTCTGCAAAGTAGAGGGCCATGCCTCACCAATAGAATAGCGTGGGCCCTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp TTTGATCTGGGGCAGATGGCTTTCCACATCACCAGGGAGCTGAAGTaGAAACTGGGATTGCAGAGGCAGGAAAAACCCAGAAGACAGTGC +
Preference number: 5 (lower is better)
Translates to: FDLGQMAFHITRELK*KLGLQRQEKPRRQC
Trigger: GCACTGTCTTCTGGGTTTTTCCTGCCTCTGCAATCCCAGTTTGCACTTCAGCTCCCTGGTGATGTGGAAAGCCATCTGCCCCAGATCAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp CAGAACCTCCTTTCTTCCCATTCTTCAGGACGTTTGTCCCTCGACTaGACAAGATCCAGCAGGAGTGGGCAACACAGGAACAAATCCGAG +
Preference number: 5 (lower is better)
Translates to: QNLLSSHSSGRLSLD*TRSSRSGQHRNKSE
Trigger: CTCGGATTTGTTCCTGTGTTGCCCACTCCTGCTGGATCTTGTCCAGTCGAGGGACAAACGTCCTGAAGAATGGGAAGAAAGGAGGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS-3UTR CAA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATGGAGATCAACGGCCTaGGAGGAGAAATCACGCTCT +
Preference number: 5 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTWRSTA*EEKSRS
Trigger: AGAGCGTGATTTCTCCTCCAAGGCCGTTGATCTCCA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCATGTCAGTATTGCCATaGTATTGTTTCAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: LYRGMATPRISTEHVAGIMSVLP*YCFSWQ
Trigger: CTGCCAGCTGAAACAATACAATGGCAATACTGACAT...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAGCATGGCCCTCTACTTaGCAGACAGAAAACGCACCA +
Preference number: 5 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSAWPST*QTENAP
Trigger: TGGTGCGTTTTCTGTCTGCAAAGTAGAGGGCCATGC...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGGCTTTGGGAGTTTTTaGCAAGTGTCACTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVGFGSF*QVSLAV
Trigger: CACAGCCAGTGACACTTGCAAAAAACTCCCAAAGCC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGGGTGCCCTTGACACTTaGTTCAGGATCCATGACCTT +
Preference number: 5 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVGALDT*FRIHDL
Trigger: AAGGTCATGGATCCTGAACAAAGTGTCAAGGGCACC...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATTACTGGCAGATGTACTaGCCTGGCTTCTGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDYWQMY*PGFWGF
Trigger: GAAGCCCCAGAAGCCAGGCAAGTACATCTGCCAGTA...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGAGATTACTCTTGGTCTaGAAGGAGAAGCCACAGGGG +
Preference number: 5 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVRLLLV*KEKPQG
Trigger: CCCCTGTGGCTTCTCCTTCAAGACCAAGAGTAATCT...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GCTGTGGAGAACTGGAAAAACCCAGCCATGAGGGGAACAGGCTCCCTTGTACCCAAATTTCTTTGGACGTaGTTCTCCTCTCCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: AVENWKNPAMRGTGSLVPKFLWT*FSSPSL
Trigger: CAGGGAAGGAGAGGAGAACAACGTCCAAAGAAATTT...GGGTACAAGGGAGCCTGTTCCCCTCATGGCTGGGTTTTTCCAGTTCTCCACAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCACGCAACCTCTTCTTTTaGGGTGGCAGCTTCTCAGCT +
Preference number: 5 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSRNLFF*GGSFSA
Trigger: AGCTGAGAAGCTGCCACCCAAAAAGAAGAGGTTGCG...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCTGCTTCCCCCTGCTGTaGATGAACTCCCCTCCAGGC +
Preference number: 5 (lower is better)
Translates to: RHWLTLIALENSNELGQFCFPLL*MNSPPG
Trigger: GCCTGGAGGGGAGTTCATCAACAGCAGGGGGAAGCA...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCAGATCAGGTTGTTCCTaGGAATCTTCTTTCTTCACG +
Preference number: 5 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTRSGCS*ESSFFT
Trigger: CGTGAAGAAAGAAGATTCCAAGGAACAACCTGATCT...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAAGGACATGGTGTATGTCTCTTaGCTCACTTTCTGCTTAGAC +
Preference number: 5 (lower is better)
Translates to: RLSGTFFPWSHGRSVPKDMVYVS*LTFCLD
Trigger: GTCTAAGCAGAAAGTGAGCAAAGAGACATACACCAT...GTCCTTGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGGGACCACGGTCTTCTaGGGGACACAGGCTTGTAGC +
Preference number: 5 (lower is better)
Translates to: RHWLTLIALENSNELGQFGTTVF*GTQACS
Trigger: GCTACAAGCCTGTGTCCCCAAGAAGACCGTGGTCCC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGAGGAGAGTGTGAATTaGGAGACCTTAGCCACAGGC +
Preference number: 5 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGEESVN*ETLATG
Trigger: GCCTGTGGCTAAGGTCTCCAAATTCACACTCTCCTC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCCCAGACCTCAGCCCTaGAAGTCTCCAATCCGTGGG +
Preference number: 5 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFPRPQP*KSPIRG
Trigger: CCCACGGATTGGAGACTTCAAGGGCTGAGGTCTGGG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp TTCTTCAGGACGTTTGTCCCTCGACTGGACAAGATCCAGCAGGAGTaGGCAACACAGGAACAAATCCGAGACACCAGACTGTTTCTCTTC +
Preference number: 5 (lower is better)
Translates to: FFRTFVPRLDKIQQE*ATQEQIRDTRLFLF
Trigger: GAAGAGAAACAGTCTGGTGTCTCGGATTTGTTCCTGTGTTGCCCACTCCTGCTGGATCTTGTCCAGTCGAGGGACAAACGTCCTGAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479350.1
CDS-3UTR CAA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGGCTTTGGGAGTTTTTaGCAAGTGTCACTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTGFGSF*QVSLAV
Trigger: CACAGCCAGTGACACTTGCAAAAAACTCCCAAAGCC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGGTGCCCTTGACACTTaGTTCAGGATCCATGACCTT +
Preference number: 5 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGGALDT*FRIHDL
Trigger: AAGGTCATGGATCCTGAACAAAGTGTCAAGGGCACC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCAAGATTACTCTTGGTCTaGAAGGAGAAGCCACAGGGG +
Preference number: 5 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSRLLLV*KEKPQG
Trigger: CCCCTGTGGCTTCTCCTTCAAGACCAAGAGTAATCT...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGAGTGATTGTTCAGGCTaGGTTTTCTCACTGTGGGAT +
Preference number: 5 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWSDCSG*VFSLWD
Trigger: ATCCCACAGTGAGAAAACCAAGCCTGAACAATCACT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTAGGGCACTGATTTACTaGGTTCTGCTGGTGACTTGG +
Preference number: 5 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGRALIY*VLLVTW
Trigger: CCAAGTCACCAGCAGAACCAAGTAAATCAGTGCCCT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGAAATTTCTTTGGACGTaGTTCTCCTCTCCTTCCCTG +
Preference number: 5 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWKFLWT*FSSPSL
Trigger: CAGGGAAGGAGAGGAGAACAACGTCCAAAGAAATTT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGCAGAATGGGAAACGTaGGGGCTCTGCTCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFAEWET*GLCSEA
Trigger: AGCCTCAGAGCAGAGCCCCAACGTTTCCCATTCTGC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAATACAGTCGTCCCCTTaGATGGGGGTTCCTCAAACT +
Preference number: 5 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTIQSSP*MGVPQT
Trigger: AGTTTGAGGAACCCCCATCAAAGGGGACGACTGTAT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGGTGAAAGGACACGTTaGCTTCCCCCTGCTGTTGAT +
Preference number: 5 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDGERTR*LPPAVD
Trigger: ATCAACAGCAGGGGGAAGCAAACGTGTCCTTTCACC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGGGGAGGAATTTCCTTaGTGTCAGATGGATCTGAGG +
Preference number: 5 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTGEEFP*CQMDLR
Trigger: CCTCAGATCCATCTGACACAAAGGAAATTCCTCCCC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTGAAACCCCCGGAAGGTaGGGGTTGTACAAACTTATG +
Preference number: 5 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGETPGR*GLYKLM
Trigger: CATAAGTTTGTACAACCCCAACCTTCCGGGGGTTTC...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTCCTCCTTCGAAGATTTaGATCCTCGCCGGCTCCCCT +
Preference number: 5 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFPPSKI*ILAGSP
Trigger: AGGGGAGCCGGCGAGGATCAAAATCTTCGAAGGAGG...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTACTCTTCGTTTGATTaGTACCCTCCTTCGAAGATT +
Preference number: 5 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTYSSFD*YPPSKI
Trigger: AATCTTCGAAGGAGGGTACAAATCAAACGAAGAGTA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGTACCGAGGAATGGCCACCCCGCGCATTTCAACAGAGCACGTAGCAGGCATCTACTCTTCGTTTGATTaGTACCCTCCTTCGAAGATT +
Preference number: 5 (lower is better)
Translates to: LYRGMATPRISTEHVAGIYSSFD*YPPSKI
Trigger: AATCTTCGAAGGAGGGTACAAATCAAACGAAGAGTA...GATGCCTGCTACGTGCTCTGTTGAAATGCGCGGGGTGGCCATTCCTCGGTACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCAATACATACTCTTCGTTaGATTTGTACCCTCCTTCGA +
Preference number: 5 (lower is better)
Translates to: GTGFRELSSPGHTADRSPIHTLR*ICTLLR
Trigger: TCGAAGGAGGGTACAAATCAAACGAAGAGTATGTAT...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGTCTCTTGGCACTTTTaGCTGTGGGCCTTCGACTTC +
Preference number: 5 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDVSWHF*LWAFDF
Trigger: GAAGTCGAAGGCCCACAGCAAAAAGTGCCAAGAGAC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCTTGGTTAGCGAGTGTTaGCGGGCTAGTGGTGGACGG +
Preference number: 5 (lower is better)
Translates to: RHWLTLIALENSNELGQFLVSEC*RASGGR
Trigger: CCGTCCACCACTAGCCCGCAAACACTCGCTAACCAA...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGAGGAGAGTGTGAATTaGGAGACCTTAGCCACAGGC +
Preference number: 5 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDEESVN*ETLATG
Trigger: GCCTGTGGCTAAGGTCTCCAAATTCACACTCTCCTC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAGCCTTTGTGGGTGGTTaGGTGGTTTTAGAACAGAGG +
Preference number: 5 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTAFVGG*VVLEQR
Trigger: CCTCTGTTCTAAAACCACCAAACCACCCACAAAGGC...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATCTGCCACTTCTGCCTTaGTGGGTGGTTTGGTGGTTT +
Preference number: 5 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDLPLLP*WVVWWF
Trigger: AAACCACCAAACCACCCACAAAGGCAGAAGTGGCAG...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGCGGGACTAGAGTCCGGAGGAGGGGGTTAGAGCTGTGCCCAGTGACATATACCTTGGTGAGATTCTATTaGTGCATTTACCCCCATCAT +
Preference number: 5 (lower is better)
Translates to: SGTRVRRRGLELCPVTYTLVRFY*CIYPHH
Trigger: ATGATGGGGGTAAATGCACAAATAGAATCTCACCAA...GGTATATGTCACTGGGCACAGCTCTAACCCCCTCCTCCGGACTCTAGTCCCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGAACAGGCTTTCGGGAACTTTCTTCCCCTGGTCACACGGCAGATCGGTCCCCATTGGTGAGATTCTATTaGTGCATTTACCCCCATCAT +
Preference number: 5 (lower is better)
Translates to: GTGFRELSSPGHTADRSPLVRFY*CIYPHH
Trigger: ATGATGGGGGTAAATGCACAAATAGAATCTCACCAA...TGGGGACCGATCTGCCGTGTGACCAGGGGAAGAAAGTTCCCGAAAGCCTGTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTTGTGGAGGCAGCCCTTaGGTGAGATTCTATTTGTGC +
Preference number: 5 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGCGGSP*VRFYLC
Trigger: GCACAAATAGAATCTCACCAAAGGGCTGCCTCCACA...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGCCCACGCTATTCTATaGGTGAGGCATGGCCCTCTA +
Preference number: 5 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFAHAIL*VRHGPL
Trigger: TAGAGGGCCATGCCTCACCAATAGAATAGCGTGGGC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCTACTGGCAGATGTACTaGCCTGGCTTCTGGGGCTTC +
Preference number: 5 (lower is better)
Translates to: RHWLTLIALENSNELGQFYWQMY*PGFWGF
Trigger: GAAGCCCCAGAAGCCAGGCAAGTACATCTGCCAGTA...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGTAAGCTCGCTTTCCTaGGGTTCCACTTCGTCCGAG +
Preference number: 5 (lower is better)
Translates to: RHWLTLIALENSNELGQFVSSLS*GSTSSE
Trigger: CTCGGACGAAGTGGAACCCAAGGAAAGCGAGCTTAC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTAACTGGGCCAGAGGTTaGTCTTCCCCTTCCAAGCCA +
Preference number: 5 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFNWARG*SSPSKP
Trigger: TGGCTTGGAAGGGGAAGACAAACCTCTGGCCCAGTT...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGCTGCGCTGGGGCCATaGGAACTCCTCAGTCTTCTC +
Preference number: 5 (lower is better)
Translates to: RGIWKLILLGFFQQREAEAALGP*ELLSLL
Trigger: GAGAAGACTGAGGAGTTCCAATGGCCCCAGCGCAGC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CCTCCTGGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGATGGTGTATGTCTCTTaGCTCACTTTCTGCTTAGAC +
Preference number: 5 (lower is better)
Translates to: PPGTWRSHFLSGHCPAIWMVYVS*LTFCLD
Trigger: GTCTAAGCAGAAAGTGAGCAAAGAGACATACACCAT...CCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCCAGGAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGCCTTTGTGGGTGGTTaGGTGGTTTTAGAACAGAGG +
Preference number: 5 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDAFVGG*VVLEQR
Trigger: CCTCTGTTCTAAAACCACCAAACCACCCACAAAGGC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATAACACAGAAGCAGAATaGGTGGAACAGGCTTTCGGG +
Preference number: 5 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDNTEAE*VEQAFG
Trigger: CCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTT...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp ACGCTCTTCTTCTGTGCTGAAGGCACCACTTCCGATGACCAAAACTaGAACGCTGTTCTCTCTGAAAGCCAGCATTCATGTCCACTCCTA +
Preference number: 5 (lower is better)
Translates to: TLFFCAEGTTSDDQN*NAVLSESQHSCPLL
Trigger: TAGGAGTGGACATGAATGCTGGCTTTCAGAGAGAACAGCGTTTCAGTTTTGGTCATCGGAAGTGGTGCCTTCAGCACAGAAGAAGAGCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp GGCATGGCCCTCTACTTTGCAGACAGAAAACGCACCAGCACTTTCTaGCTGAATGTCTGTCGGGAAAACGTCATGAAGGATGTCAGTATT +
Preference number: 5 (lower is better)
Translates to: GMALYFADRKRTSTF*LNVCRENVMKDVSI
Trigger: AATACTGACATCCTTCATGACGTTTTCCCGACAGACATTCAGGCAGAAAGTGCTGGTGCGTTTTCTGTCTGCAAAGTAGAGGGCCATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp CCACTCGGCTGCTCGAGAGAATCAGATTTCTCAAAGGAGCTGGTGTaGTGGATGACAGAAATTTCTTTGGACGTTGTTCTCCTCTCCTTC +
Preference number: 5 (lower is better)
Translates to: PLGCSRESDFSKELV*WMTEISLDVVLLSF
Trigger: GAAGGAGAGGAGAACAACGTCCAAAGAAATTTCTGTCATCCAGCACACCAGCTCCTTTGAGAAATCTGATTCTCTCGAGCAGCCGAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp ATGAACTCCCCTCCAGGCTCAAGATACTCTCTGATGACAGGGAAGTaGCTTTTCTTTCAGGTAATGTCACAGGCACTCTCAGGTATGGAG +
Preference number: 5 (lower is better)
Translates to: MNSPPGSRYSLMTGK*LFFQVMSQALSGME
Trigger: CTCCATACCTGAGAGTGCCTGTGACATTACCTGAAAGAAAAGGCACTTCCCTGTCATCAGAGAGTATCTTGAGCCTGGAGGGGAGTTCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp TTCAAGCACCAGTGTCCTCAACCTCTGGCATGGTATTGGAATCTGTaGCTTCAGAACCTCCTTTCTTCCCATTCTTCAGGACGTTTGTCC +
Preference number: 5 (lower is better)
Translates to: FKHQCPQPLAWYWNL*LQNLLSSHSSGRLS
Trigger: GGACAAACGTCCTGAAGAATGGGAAGAAAGGAGGTTCTGAAGGCACAGATTCCAATACCATGCCAGAGGTTGAGGACACTGGTGCTTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS CCA 90 bp CTCGGCTGCTCGAGAGAATCAGATTTCTCAAAGGAGCTGGTGTGCTaGATGACAGAAATTTCTTTGGACGTTGTTCTCCTCTCCTTCCCT +
Preference number: 5 (lower is better)
Translates to: LGCSRESDFSKELVC*MTEISLDVVLLSFP
Trigger: AGGGAAGGAGAGGAGAACAACGTCCAAAGAAATTTCTGTCATCCAGCACACCAGCTCCTTTGAGAAATCTGATTCTCTCGAGCAGCCGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp CAGTTACAAAATGAGAAAGACCTCGCTGTGCTGTCCTCCATTCAGTaGGTTCTGGATGGATTGCCAGATGATGTGAAGGGCTCTTGGTCA +
Preference number: 5 (lower is better)
Translates to: QLQNEKDLAVLSSIQ*VLDGLPDDVKGSWS
Trigger: TGACCAAGAGCCCTTCACATCATCTGGCAATCCATCCAGAACCCACTGAATGGAGGACAGCACAGCGAGGTCTTTCTCATTTTGTAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS CCA 90 bp ACATGCTTAAAGGTGGATATGAGATGGCCAAAGTCCCATGAGGAATaGCCTCCAGGTATGATGATGAAATCCAGTGCAGGAGGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: TCLKVDMRWPKSHEE*PPGMMMKSSAGGKV
Trigger: GACCTTCCCTCCTGCACTGGATTTCATCATCATACCTGGAGGCCATTCCTCATGGGACTTTGGCCATCTCATATCCACCTTTAAGCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS-3UTR CAA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTGGAGATCAACGGCCTaGGAGGAGAAATCACGCTCT +
Preference number: 5 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFWRSTA*EEKSRS
Trigger: AGAGCGTGATTTCTCCTCCAAGGCCGTTGATCTCCA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCCCTTTAGTTCTGGGTaGGAGATCAACGGCCTTGGA +
Preference number: 5 (lower is better)
Translates to: RHWLTLIALENSNELGQFPFSSG*EINGLG
Trigger: TCCAAGGCCGTTGATCTCCAACCCAGAACTAAAGGG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGTCCACCACGGCCTCGTaGATGGTGATGAGCTTCGTG +
Preference number: 5 (lower is better)
Translates to: RGIWKLILLGFFQQREAESTTAS*MVMSFV
Trigger: CACGAAGCTCATCACCATCAACGAGGCCGTGGTGGA...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATCTCCTTCACTCTTTTTaGCTGCTGGGTTTCCATGGT +
Preference number: 5 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDLLHSF*LLGFHG
Trigger: ACCATGGAAACCCAGCAGCAAAAAAGAGTGAAGGAG...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GGGACTTGGAGGAGTCACTTTCTGTCAGGCCACTGTCCAGCAATATGGACAGTGAGATCAGGTTGTTCCTaGGAATCTTCTTTCTTCACG +
Preference number: 5 (lower is better)
Translates to: GTWRSHFLSGHCPAIWTVRSGCS*ESSFFT
Trigger: CGTGAAGAAAGAAGATTCCAAGGAACAACCTGATCT...CACTGTCCATATTGCTGGACAGTGGCCTGACAGAAAGTGACTCCTCCAAGTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATGGAGGGGAGATCAGGTaGTTCCTTGGAATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDGGEIR*FLGIFF
Trigger: AAAGAAGATTCCAAGGAACAACCTGATCTCCCCTCC...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCGAGGAGAGTGTGAATTaGGAGACCTTAGCCACAGGC +
Preference number: 5 (lower is better)
Translates to: RHWLTLIALENSNELGQFEESVN*ETLATG
Trigger: GCCTGTGGCTAAGGTCTCCAAATTCACACTCTCCTC...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGGCTGGAAACGTCTGTaGCTGGACACTGGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: RGIWKLILLGFFQQREAEGWKRL*LDTGSQ
Trigger: CTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGGCTTGCTGCTTCTCTaGGGGAGGATGAGAGCCCTA +
Preference number: 5 (lower is better)
Translates to: RGIWKLILLGFFQQREAEGLLLL*GRMRAL
Trigger: TAGGGCTCTCATCCTCCCCAAGAGAAGCAGCAAGCC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACATCCAGCTCAGATGTATaGCTCATTCCTCTTCAGAAG +
Preference number: 5 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTSSSDV*LIPLQK
Trigger: CTTCTGAAGAGGAATGAGCAATACATCTGAGCTGGA...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp GAACAAATCCGAGACACCAGACTGTTTCTCTTCTCAGAGGGGCTCTaGGTCATGAGGAGAACCTCTGGATATGCAGAATGGATAAACTGC +
Preference number: 5 (lower is better)
Translates to: EQIRDTRLFLFSEGL*VMRRTSGYAEWINC
Trigger: GCAGTTTATCCATTCTGCATATCCAGAGGTTCTCCTCATGACTCAGAGCCCCTCTGAGAAGAGAAACAGTCTGGTGTCTCGGATTTGTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479350.1
CDS TCA 90 bp TCTTTGGCTTCTCTGGCTCTTGTTCCAGCTTTTGCAGTTACAAAATaGGAAAGACCTCGCTGTGCTGTCCTCCATTCAGTGGGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: SLASLALVPAFAVTK*ERPRCAVLHSVGSG
Trigger: TCCAGAACCCACTGAATGGAGGACAGCACAGCGAGGTCTTTCTCATTTTGTAACTGCAAAAGCTGGAACAAGAGCCAGAGAAGCCAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS TCA 90 bp GGGAATAACATGCTTAAAGGTGGATATGAGATGGCCAAAGTCCCATaGGGAATGGCCTCCAGGTATGATGATGAAATCCAGTGCAGGAGG +
Preference number: 5 (lower is better)
Translates to: GNNMLKGGYEMAKVP*GMASRYDDEIQCRR
Trigger: CCTCCTGCACTGGATTTCATCATCATACCTGGAGGCCATTCCTCATGGGACTTTGGCCATCTCATATCCACCTTTAAGCATGTTATTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS-3UTR CAA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTATGTCAGTATTGCCATaGTATTGTTTCAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGMSVLP*YCFSWQ
Trigger: CTGCCAGCTGAAACAATACAATGGCAATACTGACAT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGCTTTGGGAGTTTTTaGCAAGTGTCACTGGCTGTG +
Preference number: 5 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGFGSF*QVSLAV
Trigger: CACAGCCAGTGACACTTGCAAAAAACTCCCAAAGCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCCAAAGGTAATTCGATaGCCGGCTGGCGCTTCAGCA +
Preference number: 5 (lower is better)
Translates to: RGIWKLILLGFFQQREAEPKVIR*PAGASA
Trigger: TGCTGAAGCGCCAGCCGGCAATCGAATTACCTTTGG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTATGACAGAAATTTCTTaGGACGTTGTTCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGMTEIS*DVVLLS
Trigger: GGAGAGGAGAACAACGTCCAAAGAAATTTCTGTCAT...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCTCTCAGGTATGGAGTaGGGAAAGCTCTGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: RHWLTLIALENSNELGQFLSGME*GKLCFA
Trigger: AGCAAAGCAGAGCTTTCCCAACTCCATACCTGAGAG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGGGAGGAATTTCCTTaGTGTCAGATGGATCTGAGG +
Preference number: 5 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGEEFP*CQMDLR
Trigger: CCTCAGATCCATCTGACACAAAGGAAATTCCTCCCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCCCGGAAGGTTGGGGTaGTACAAACTTATGCACCAA +
Preference number: 5 (lower is better)
Translates to: RHWLTLIALENSNELGQFPGRLG*YKLMHQ
Trigger: TTGGTGCATAAGTTTGTACAACCCCAACCTTCCGGG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAATGGTGTATGTCTCTTaGCTCACTTTCTGCTTAGAC +
Preference number: 5 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTMVYVS*LTFCLD
Trigger: GTCTAAGCAGAAAGTGAGCAAAGAGACATACACCAT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CAAGGACTCACCAACCAAAGGCAAGGTTTGGCTCTGAAACCTCGACCAGTTGGTCTCACACTGATTGCTTaGGAGAATTCCAACGAGTTA +
Preference number: 5 (lower is better)
Translates to: QGLTNQRQGLALKPRPVGLTLIA*ENSNEL
Trigger: TAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAG...ACCAACTGGTCGAGGTTTCAGAGCCAAACCTTGCCTTTGGTTGGTGAGTCCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTCCCTGGGGCAGGCACTaGATTCACACAGCCTGGCTG +
Preference number: 5 (lower is better)
Translates to: SFALIYTIPTLQDASVETPWGRH*IHTAWL
Trigger: CAGCCAGGCTGTGTGAATCAAGTGCCTGCCCCAGGG...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 90 bp TCTTGTTCCAGCTTTTGCAGTTACAAAATGAGAAAGACCTCGCTGTaGTGTCCTCCATTCAGTGGGTTCTGGATGGATTGCCAGATGATG +
Preference number: 5 (lower is better)
Translates to: SCSSFCSYKMRKTSL*CPPFSGFWMDCQMM
Trigger: CATCATCTGGCAATCCATCCAGAACCCACTGAATGGAGGACAGCACAGCGAGGTCTTTCTCATTTTGTAACTGCAAAAGCTGGAACAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS GCA 90 bp GACTTGTACTGCTTCTTTGGCTTCTCTGGCTCTTGTTCCAGCTTTTaGAGTTACAAAATGAGAAAGACCTCGCTGTGCTGTCCTCCATTC +
Preference number: 5 (lower is better)
Translates to: DLYCFFGFSGSCSSF*SYKMRKTSLCCPPF
Trigger: GAATGGAGGACAGCACAGCGAGGTCTTTCTCATTTTGTAACTGCAAAAGCTGGAACAAGAGCCAGAGAAGCCAAAGAAGCAGTACAAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS-3UTR CAA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCCCTTTAGTTCTGGGTaGGAGATCAACGGCCTTGGA +
Preference number: 5 (lower is better)
Translates to: RGIWKLILLGFFQQREAEPFSSG*EINGLG
Trigger: TCCAAGGCCGTTGATCTCCAACCCAGAACTAAAGGG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATATGTCAGTATTGCCATaGTATTGTTTCAGCTGGCAG +
Preference number: 5 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDMSVLP*YCFSWQ
Trigger: CTGCCAGCTGAAACAATACAATGGCAATACTGACAT...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGAGGAGATGCTCAGGTTaGCCAGGCGACATGAATGCT +
Preference number: 5 (lower is better)
Translates to: RGIWKLILLGFFQQREAERRCSG*PGDMNA
Trigger: AGCATTCATGTCGCCTGGCAAACCTGAGCATCTCCT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTTTTGTAATGCATCATTaGGGACCACGGCTCATGCTC +
Preference number: 5 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFFVMHH*GPRLML
Trigger: GAGCATGAGCCGTGGTCCCAAATGATGCATTACAAA...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCTGCCAAACTGACTTTTaGTGGACTCAAAGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: RHWLTLIALENSNELGQFCQTDF*WTQRQV
Trigger: CACCTGCCTTTGAGTCCACAAAAAGTCAGTTTGGCA...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCGCAACCTCTTCTTTTaGGGTGGCAGCTTCTCAGCT +
Preference number: 5 (lower is better)
Translates to: RGIWKLILLGFFQQREAERNLFF*GGSFSA
Trigger: AGCTGAGAAGCTGCCACCCAAAAAGAAGAGGTTGCG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GACTGGATTCACAACACAGAAGCAGAATTGGTGGAACAGGCTTTCGGGAACTTTGGAGGGGAGATCAGGTaGTTCCTTGGAATCTTCTTT +
Preference number: 5 (lower is better)
Translates to: DWIHNTEAELVEQAFGNFGGEIR*FLGIFF
Trigger: AAAGAAGATTCCAAGGAACAACCTGATCTCCCCTCC...AAAGTTCCCGAAAGCCTGTTCCACCAATTCTGCTTCTGTGTTGTGAATCCAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp CTGAGGAAGTGGGATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACAATACATACTCTTCGTTaGATTTGTACCCTCCTTCGA +
Preference number: 5 (lower is better)
Translates to: LRKWDDSRKVAGNVCCWTIHTLR*ICTLLR
Trigger: TCGAAGGAGGGTACAAATCAAACGAAGAGTATGTAT...TGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCATCCCACTTCCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp GTCTTAACCCTCCCCACCTACTGTGTCCTGTACCCAAGCAGCTTCAATAGCTCATTGGTGAGATTCTATTaGTGCATTTACCCCCATCAT +
Preference number: 5 (lower is better)
Translates to: VLTLPTYCVLYPSSFNSSLVRFY*CIYPHH
Trigger: ATGATGGGGGTAAATGCACAAATAGAATCTCACCAA...TGAGCTATTGAAGCTGCTTGGGTACAGGACACAGTAGGTGGGGAGGGTTAAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGGTAGAGGCTGGATTTaGGGGACTCCATGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: SFALIYTIPTLQDASVETGRGWI*GTPCCC
Trigger: GCAGCAGCATGGAGTCCCCAAAATCCAGCCTCTACC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTAGGCGGCAGAAGGCATaGAGTGGCTTCTCAGGAGAG +
Preference number: 5 (lower is better)
Translates to: SFALIYTIPTLQDASVETRRQKA*SGFSGE
Trigger: CTCTCCTGAGAAGCCACTCAATGCCTTCTGCCGCCT...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGGCACTGGCTCACACTGATTGCTTTGGAGAATTCCAACGAGTTAGGACAATTCCGTAGATCACCCCTTTaGTTTTCAAACCCTTCTTGG +
Preference number: 5 (lower is better)
Translates to: RHWLTLIALENSNELGQFRRSPL*FSNPSW
Trigger: CCAAGAAGGGTTTGAAAACAAAAGGGGTGATCTACG...GAATTGTCCTAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAGCCAGTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGCAGAATGGGAAACGTaGGGGCTCTGCTCTGAGGCT +
Preference number: 5 (lower is better)
Translates to: SFALIYTIPTLQDASVETAEWET*GLCSEA
Trigger: AGCCTCAGAGCAGAGCCCCAACGTTTCCCATTCTGC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTGGGGTGGTGGAACACTaGCAGTGCTTCTGTGTAGGG +
Preference number: 5 (lower is better)
Translates to: SFALIYTIPTLQDASVETGVVEH*QCFCVG
Trigger: CCCTACACAGAAGCACTGCAAGTGTTCCACCACCCC...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGAAGTGCAAACTGGGATaGCAGAGGCAGGAAAAACCC +
Preference number: 5 (lower is better)
Translates to: RGIWKLILLGFFQQREAEKCKLG*QRQEKP
Trigger: GGGTTTTTCCTGCCTCTGCAATCCCAGTTTGCACTT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGCTCTCAGGTATGGAGTaGGGAAAGCTCTGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: RGIWKLILLGFFQQREAELSGME*GKLCFA
Trigger: AGCAAAGCAGAGCTTTCCCAACTCCATACCTGAGAG...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGGGGAGGAATTTCCTTaGTGTCAGATGGATCTGAGG +
Preference number: 5 (lower is better)
Translates to: RGIWKLILLGFFQQREAEGEEFP*CQMDLR
Trigger: CCTCAGATCCATCTGACACAAAGGAAATTCCTCCCC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp ATGATTCGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTGGAAGCCAGATTACTCTTCGTTTGATTaGTACCCTCCTTCGAAGATT +
Preference number: 5 (lower is better)
Translates to: MIRGKWLETSVAGHWKPDYSSFD*YPPSKI
Trigger: AATCTTCGAAGGAGGGTACAAATCAAACGAAGAGTA...ATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCGAATCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 90 bp ACCACAGCTGAAATGGGAATAACATGCTTAAAGGTGGATATGAGATaGCCAAAGTCCCATGAGGAATGGCCTCCAGGTATGATGATGAAA +
Preference number: 5 (lower is better)
Translates to: TTAEMGITCLKVDMR*PKSHEEWPPGMMMK
Trigger: TTTCATCATCATACCTGGAGGCCATTCCTCATGGGACTTTGGCCATCTCATATCCACCTTTAAGCATGTTATTCCCATTTCAGCTGTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS-3UTR CAA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGGTGCTATGCAAACGGTaGAAGGTTGGAGACATCTGT +
Preference number: 5 (lower is better)
Translates to: RGIWKLILLGFFQQREAEVLCKR*KVGDIC
Trigger: ACAGATGTCTCCAACCTTCAACCGTTTGCATAGCAC...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTAGCATGCTGGGCTTCTaGCAGCGAATTCCACACTCC +
Preference number: 5 (lower is better)
Translates to: SFALIYTIPTLQDASVETSMLGF*QRIPHS
Trigger: GGAGTGTGGAATTCGCTGCAAGAAGCCCAGCATGCT...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 90 bp CGATCAGAAACCCAAACAGAAGCATCCCTCTTGAATTCGTGCTGCTaGAAAACACGGAATAAATTCAGCCTGCAGACACAGAATCTAATC +
Preference number: 5 (lower is better)
Translates to: RSETQTEASLLNSCC*KTRNKFSLQTQNLI
Trigger: GATTAGATTCTGTGTCTGCAGGCTGAATTTATTCCGTGTTTTTCAGCAGCACGAATTCAAGAGGGATGCTTCTGTTTGGGTTTCTGATCG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS TCA 90 bp CCTCTTGCAGAAGTGGATCCCGTTAACAATGAAACAGATATGACATaGACTTGGCAACTTCTGAGAACAGGAATGTCTAGTGGTGCTTCT +
Preference number: 5 (lower is better)
Translates to: PLAEVDPVNNETDMT*TWQLLRTGMSSGAS
Trigger: AGAAGCACCACTAGACATTCCTGTTCTCAGAAGTTGCCAAGTTCATGTCATATCTGTTTCATTGTTAACGGGATCCACTTCTGCAAGAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489103.5
ENST00000491442.5
CDS-3UTR CAA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGAGTATTGCCATTGTATaGTTTCAGCTGGCAGTGGCA +
Preference number: 5 (lower is better)
Translates to: RGIWKLILLGFFQQREAESIAIV*FQLAVA
Trigger: TGCCACTGCCAGCTGAAACAATACAATGGCAATACT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTCCTATTCGCCCACACTaGCCAAAGATGATCTCAGCG +
Preference number: 5 (lower is better)
Translates to: SFALIYTIPTLQDASVETPIRPH*PKMISA
Trigger: CGCTGAGATCATCTTTGGCAAGTGTGGGCGAATAGG...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp AGAGGAATCTGGAAGCTAATTCTTTTAGGCTTTTTCCAACAGAGGGAAGCAGAGAGTGATTGTTCAGGCTaGGTTTTCTCACTGTGGGAT +
Preference number: 5 (lower is better)
Translates to: RGIWKLILLGFFQQREAESDCSG*VFSLWD
Trigger: ATCCCACAGTGAGAAAACCAAGCCTGAACAATCACT...CTCTGCTTCCCTCTGTTGGAAAAAGCCTAAAAGAATTAGCTTCCAGATTCCTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTAGGGCACTGATTTACTaGGTTCTGCTGGTGACTTGG +
Preference number: 5 (lower is better)
Translates to: SFALIYTIPTLQDASVETRALIY*VLLVTW
Trigger: CCAAGTCACCAGCAGAACCAAGTAAATCAGTGCCCT...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTATACAGTCGTCCCCTTaGATGGGGGTTCCTCAAACT +
Preference number: 5 (lower is better)
Translates to: SFALIYTIPTLQDASVETIQSSP*MGVPQT
Trigger: AGTTTGAGGAACCCCCATCAAAGGGGACGACTGTAT...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTCCCATCCCAGTGCGGTaGCTGTACATATCTACAGTA +
Preference number: 5 (lower is better)
Translates to: SFALIYTIPTLQDASVETPIPVR*LYISTV
Trigger: TACTGTAGATATGTACAGCAACCGCACTGGGATGGG...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTCCCTTCTTGGTCTTTTaGGTAAGCTCGCTTTCCTTG +
Preference number: 5 (lower is better)
Translates to: SFALIYTIPTLQDASVETPFLVF*VSSLSL
Trigger: CAAGGAAAGCGAGCTTACCAAAAAGACCAAGAAGGG...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS-3UTR CAA 90 bp TCTTTTGCACTGATATATACCATACCAACATTGCAAGATGCAAGTGTGGAAACTCTCACACTGATTGCTTaGGAGAATTCCAACGAGTTA +
Preference number: 5 (lower is better)
Translates to: SFALIYTIPTLQDASVETLTLIA*ENSNEL
Trigger: TAACTCGTTGGAATTCTCCAAAGCAATCAGTGTGAG...AGTTTCCACACTTGCATCTTGCAATGTTGGTATGGTATATATCAGTGCAAAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp GGCAGCCCACAGAGCTGCTGCGGTCCAGCGGCGGGGTaGCAGAAGGCTCGGGGTTGGTCGGTGCACGCGGGG +
Preference number: 6 (lower is better)
Translates to: GSPQSCCGPAAG*QKARGWSVHAG
Trigger: CCCCGCGTGCACCGACCAACCCCGAGCCTTCTGCCACCCCGCCGCTGGACCGCAGCAGCTCTGTGGGCTGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 72 bp GGGGCCGGTCCCAGCCAGGGGAGGCCCGGCATGCTCTaGCTGGACATGGAGCAGCTGCTGGCTGTCAGGCGC +
Preference number: 6 (lower is better)
Translates to: GAGPSQGRPGML*LDMEQLLAVRR
Trigger: GCGCCTGACAGCCAGCAGCTGCTCCATGTCCAGCCAGAGCATGCCGGGCCTCCCCTGGCTGGGACCGGCCCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 72 bp GGCTGCGGGGCTAAGAGCTCTTGGGCGGGGCTCTCTTaGGTGGCAGCTGTGCCGCTGCCTGGGTATGGGACG +
Preference number: 6 (lower is better)
Translates to: GCGAKSSWAGLS*VAAVPLPGYGT
Trigger: CGTCCCATACCCAGGCAGCGGCACAGCTGCCACCCAAGAGAGCCCCGCCCAAGAGCTCTTAGCCCCGCAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp CACCTAGGCGCCGCTCTTCCCACCAGAGGGGCGGGCTaGCTTGGCCAGGACCCCGCGAGGCTCCTCCATGAA +
Preference number: 6 (lower is better)
Translates to: HLGAALPTRGAG*LGQDPARLLHE
Trigger: TTCATGGAGGAGCCTCGCGGGGTCCTGGCCAAGCAAGCCCGCCCCTCTGGTGGGAAGAGCGGCGCCTAGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 72 bp CCGCAGTGCATGTGGTGGGCCAGGCGGGGGCGCCTCTaGGGATGGTCTGGACAGCTCATCCTGGCTCTCCTC +
Preference number: 6 (lower is better)
Translates to: PQCMWWARRGRL*GWSGQLILALL
Trigger: GAGGAGAGCCAGGATGAGCTGTCCAGACCATCCTCAGAGGCGCCCCCGCCTGGCCCACCACATGCACTGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS TCA 72 bp GAGGCGCAGGTCTCTGGGCTTCTGCTGAGGAGCTTGTaGGGTAGAGGCGCGGGCGGGAAGAGAACCCGTGGG +
Preference number: 6 (lower is better)
Translates to: EAQVSGLLLRSL*GRGAGGKRTRG
Trigger: CCCACGGGTTCTCTTCCCGCCCGCGCCTCTACCTCACAAGCTCCTCAGCAGAAGCCCAGAGACCTGCGCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS GCA 72 bp GCTGAAGTCTTGGAGACCCACAAGGGAGAGCGCCCATaGCCCTTCCTGGGTCCACGTGCAGGCCAGGTGGGC +
Preference number: 6 (lower is better)
Translates to: AEVLETHKGERP*PFLGPRAGQVG
Trigger: GCCCACCTGGCCTGCACGTGGACCCAGGAAGGGGCATGGGCGCTCTCCCTTGTGGGTCTCCAAGACTTCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 72 bp GTGGTGGTGACTCGGCCTGACCTGGAGACCATCTCCTaGTGGGCGAGTATCTGGGGAGGCCTGGGTCGGTGG +
Preference number: 6 (lower is better)
Translates to: VVVTRPDLETIS*WASIWGGLGRW
Trigger: CCACCGACCCAGGCCTCCCCAGATACTCGCCCACCAGGAGATGGTCTCCAGGTCAGGCCGAGTCACCACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS TCA 72 bp TTCCCTGGCGGCGCTGACCGTGGTGGTGACTCGGCCTaGCCTGGAGACCATCTCCTGGTGGGCGAGTATCTG +
Preference number: 6 (lower is better)
Translates to: FPGGADRGGDSA*PGDHLLVGEYL
Trigger: CAGATACTCGCCCACCAGGAGATGGTCTCCAGGTCAGGCCGAGTCACCACCACGGTCAGCGCCGCCAGGGAA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS TCA 72 bp GGCCAGGACCCCGCGAGGCTCCTCCATGAACTAGGTTaGGGCTGCTGGGTTTGTGCCTCGAATCCTGCGGGC +
Preference number: 6 (lower is better)
Translates to: GQDPARLLHELG*GCWVCASNPAG
Trigger: GCCCGCAGGATTCGAGGCACAAACCCAGCAGCCTCAACCTAGTTCATGGAGGAGCCTCGCGGGGTCCTGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000643665.1
CDS CCA 72 bp GGTGGAACACTTGCAGTGCTTCTGTGTAGGGCACAGTaGGCCCCAATGGGGGCCTGTCCTGCCCTGGGCCCT +
Preference number: 6 (lower is better)
Translates to: GGTLAVLLCRAQ*APMGACPALGP
Trigger: AGGGCCCAGGGCAGGACAGGCCCCCATTGGGGCCCACTGTGCCCTACACAGAAGCACTGCAAGTGTTCCACC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp GTGGGCGAGTATCTGGGGAGGCCTGGGTCGGTGGTACCCTCGAGTTaGGAGAGCACATGTGCTCGAGGGGCCAGTTCTCTTCCCAGGGGG +
Preference number: 6 (lower is better)
Translates to: VGEYLGRPGSVVPSS*ESTCARGASSLPRG
Trigger: CCCCCTGGGAAGAGAACTGGCCCCTCGAGCACATGTGCTCTCCAAACTCGAGGGTACCACCGACCCAGGCCTCCCCAGATACTCGCCCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS TCA 72 bp GGCCAGGACCCCGCGAGGCTCCTCCATGAACTAGGTTaGGGCTGCTGGGTTTGTGCCTCGAATCCTTCGGCC +
Preference number: 6 (lower is better)
Translates to: GQDPARLLHELG*GCWVCASNPSA
Trigger: GGCCGAAGGATTCGAGGCACAAACCCAGCAGCCTCAACCTAGTTCATGGAGGAGCCTCGCGGGGTCCTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372584.5
CDS GCA 72 bp CCATGGCCCAGTCATCCCTGGTCCTGGCACAAGAGATaGCACGCTGGATGCTGGGGGTGGCTCTTCTCCCCT +
Preference number: 6 (lower is better)
Translates to: PWPSHPWSWHKR*HAGCWGWLFSP
Trigger: AGGGGAGAAGAGCCACCCCCAGCATCCAGCGTGGCATCTCTTGTGCCAGGACCAGGGATGACTGGGCCATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp CTTGGGCGGGGCTCTCTTGGGTGGCAGCTGTGCCGCTaGCTGGGTATGGGACGCTGGAAGAAACACTGGTCT +
Preference number: 6 (lower is better)
Translates to: LGRGSLGWQLCR*LGMGRWKKHWS
Trigger: AGACCAGTGTTTCTTCCAGCGTCCCATACCCAGGCAGCGGCACAGCTGCCACCCAAGAGAGCCCCGCCCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp AGAGCTCTTGGGCGGGGCTCTCTTGGGTGGCAGCTGTaGCGCTGCCTGGGTATGGGACGCTGGAAGAAACAC +
Preference number: 6 (lower is better)
Translates to: RALGRGSLGWQL*RCLGMGRWKKH
Trigger: GTGTTTCTTCCAGCGTCCCATACCCAGGCAGCGGCACAGCTGCCACCCAAGAGAGCCCCGCCCAAGAGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp GCGGGGCTTGCGGGAGCTGGATGGCACAAGCCTTCCTaGCTCAGGATGCGGAGCTGTGGCCATGGTGTATGT +
Preference number: 6 (lower is better)
Translates to: AGLAGAGWHKPS*LRMRSCGHGVC
Trigger: ACATACACCATGGCCACAGCTCCGCATCCTGAGGCAGGAAGGCTTGTGCCATCCAGCTCCCGCAAGCCCCGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 72 bp CAGGGGCCACGAAGGAGCCAGAGGGTCCAGGTCTCATaGGGTCAACCAGTTGCCATGTGGACCCCTCCAGGA +
Preference number: 6 (lower is better)
Translates to: QGPRRSQRVQVS*GQPVAMWTPPG
Trigger: TCCTGGAGGGGTCCACATGGCAACTGGTTGACCCCATGAGACCTGGACCCTCTGGCTCCTTCGTGGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp CTGACCTCCGCATCTCTCGGGCATGTGGGTGGTGGCTaGGGACAGTCAACATGTGGGTGCCCAGGGGTTTGG +
Preference number: 6 (lower is better)
Translates to: LTSASLGHVGGG*GQSTCGCPGVW
Trigger: CCAAACCCCTGGGCACCCACATGTTGACTGTCCCCAGCCACCACCCACATGCCCGAGAGATGCGGAGGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp GGAGGTGAACCTCTGTCATGCGGGGCTTGCGGGAGCTaGATGGCACAAGCCTTCCTGCCTCAGGATGCGGAG +
Preference number: 6 (lower is better)
Translates to: GGEPLSCGACGS*MAQAFLPQDAE
Trigger: CTCCGCATCCTGAGGCAGGAAGGCTTGTGCCATCCAGCTCCCGCAAGCCCCGCATGACAGAGGTTCACCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 72 bp CCTGACCTGGAGACCATCTCCTGGTGGGCGAGTATCTaGGGAGGCCTGGGTCGGTGGTACCCTCGAGTTTGG +
Preference number: 6 (lower is better)
Translates to: PDLETISWWASI*GGLGRWYPRVW
Trigger: CCAAACTCGAGGGTACCACCGACCCAGGCCTCCCCAGATACTCGCCCACCAGGAGATGGTCTCCAGGTCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 72 bp CTCCTGGCCGGGCCTGCACCATCTGGATCCCACCGATaGGAATCAAGGGACATGGGGCACGGGTCAAGTGCT +
Preference number: 6 (lower is better)
Translates to: LLAGPAPSGSHR*ESRDMGHGSSA
Trigger: AGCACTTGACCCGTGCCCCATGTCCCTTGATTCCCATCGGTGGGATCCAGATGGTGCAGGCCCGGCCAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CAA 72 bp TCCCTGATTCTGAACCGGACCCTGGCTTGGGAGTCCTaGGCTGGAAGCCCGTGGGTCCCTCCAAGGAGGGCA +
Preference number: 6 (lower is better)
Translates to: SLILNRTLAWES*AGSPWVPPRRA
Trigger: TGCCCTCCTTGGAGGGACCCACGGGCTTCCAGCCAAGGACTCCCAAGCCAGGGTCCGGTTCAGAATCAGGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp CTCCTCTCCTTCCCTGATTCTGAACCGGACCCTGGCTaGGGAGTCCTTGGCTGGAAGCCCGTGGGTCCCTCC +
Preference number: 6 (lower is better)
Translates to: LLSFPDSEPDPG*GVLGWKPVGPS
Trigger: GGAGGGACCCACGGGCTTCCAGCCAAGGACTCCCAAGCCAGGGTCCGGTTCAGAATCAGGGAAGGAGAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp GGCCACGAAGGAGCCAGAGGGTCCAGGTCTCATGGGGTCAACCAGTaGCCATGTGGACCCCTCCAGGAGATGCTCAGGTTTGCCAGGCGA +
Preference number: 6 (lower is better)
Translates to: GHEGARGSRSHGVNQ*PCGPLQEMLRFARR
Trigger: TCGCCTGGCAAACCTGAGCATCTCCTGGAGGGGTCCACATGGCAACTGGTTGACCCCATGAGACCTGGACCCTCTGGCTCCTTCGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp ATTTTGGGGACTCCATGCTGCTGCGCCTGGACAGTGAGCTCCGCCTaGGCTTCACGCTGTCGATCTCGCTGGTGTCCACCACGGCCTCGT +
Preference number: 6 (lower is better)
Translates to: ILGTPCCCAWTVSSA*ASRCRSRWCPPRPR
Trigger: ACGAGGCCGTGGTGGACACCAGCGAGATCGACAGCGTGAAGCCAAGGCGGAGCTCACTGTCCAGGCGCAGCAGCATGGAGTCCCCAAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp GACGTTGTTCTCCTCTCCTTCCCTGATTCTGAACCGGACCCTGGCTaGGGAGTCCTTGGCTGGAAGCCCGTGGGTCCCTCCAAGGAGGGC +
Preference number: 6 (lower is better)
Translates to: DVVLLSFPDSEPDPG*GVLGWKPVGPSKEG
Trigger: GCCCTCCTTGGAGGGACCCACGGGCTTCCAGCCAAGGACTCCCAAGCCAGGGTCCGGTTCAGAATCAGGGAAGGAGAGGAGAACAACGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp CTTCTCAGCTGGGAGCTGGGCAAGTGTCTGGCTGCGCTGGGGCCATaGGAACTCCTCAGTCTTCTCAGGTTCCTTAGGGGGCGGCTCTGG +
Preference number: 6 (lower is better)
Translates to: LLSWELGKCLAALGP*ELLSLLRFLRGRLW
Trigger: CCAGAGCCGCCCCCTAAGGAACCTGAGAAGACTGAGGAGTTCCAATGGCCCCAGCGCAGCCAGACACTTGCCCAGCTCCCAGCTGAGAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 72 bp GGGCTTGCTTGGCCAGGACCCCGCGAGGCTCCTCCATaGACTAGGTTGAGGCTGCTGGGTTTGTGCCTCGAA +
Preference number: 6 (lower is better)
Translates to: GLAWPGPREAPP*TRLRLLGLCLE
Trigger: TTCGAGGCACAAACCCAGCAGCCTCAACCTAGTTCATGGAGGAGCCTCGCGGGGTCCTGGCCAAGCAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 72 bp GAATTTGGAGACCTTAGCCACAGGCGACACGGAGGCTaGCGAGCTCTCAGTGGGACTCCAGCGGCCTCGCTC +
Preference number: 6 (lower is better)
Translates to: EFGDLSHRRHGG*RALSGTPAASL
Trigger: GAGCGAGGCCGCTGGAGTCCCACTGAGAGCTCGTCAGCCTCCGTGTCGCCTGTGGCTAAGGTCTCCAAATTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS TCA 72 bp GGCGGGAGTAAGAGCGATGAGAGTAGAACGCTGAGCTaGGGCTGGCCTCCTTCACGGCCACCTTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: GGSKSDESRTLS*GWPPSRPPSSR
Trigger: CCTGGAGGAAGGTGGCCGTGAAGGAGGCCAGCCTCAGCTCAGCGTTCTACTCTCATCGCTCTTACTCCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000489103.5
ENST00000491442.5
CDS GCA 72 bp CCAGTGAAGGGAGGTGAACCTCTGTCATGCGGGGCTTaGGGGAGCTGGATGGCACAAGCCTTCCTGCCTCAG +
Preference number: 6 (lower is better)
Translates to: PVKGGEPLSCGA*GSWMAQAFLPQ
Trigger: CTGAGGCAGGAAGGCTTGTGCCATCCAGCTCCCGCAAGCCCCGCATGACAGAGGTTCACCTCCCTTCACTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS GCA 72 bp TGGGTCGGTGGTACCCTCGAGTTTGGAGAGCACATGTaGTCGAGGGGCCAGTTCTCTTCCCAGGGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: WVGGTLEFGEHM*SRGQFSSQGAE
Trigger: CTCTGCCCCCTGGGAAGAGAACTGGCCCCTCGAGCACATGTGCTCTCCAAACTCGAGGGTACCACCGACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 72 bp GGCGGGGCTCTCTTGGGTGGCAGCTGTGCCGCTGCCTaGGTATGGGACGCTGGAAGAAACACTGGTCTGAAT +
Preference number: 6 (lower is better)
Translates to: GGALLGGSCAAA*VWDAGRNTGLN
Trigger: ATTCAGACCAGTGTTTCTTCCAGCGTCCCATACCCAGGCAGCGGCACAGCTGCCACCCAAGAGAGCCCCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp CTGTGCTGGACTGGGACAGGGAACAGCGTTCGTGGCTaGAACTGTGGCTCCCAGAGCTGTATAGCCCGCTGG +
Preference number: 6 (lower is better)
Translates to: LCWTGTGNSVRG*NCGSQSCIARW
Trigger: CCAGCGGGCTATACAGCTCTGGGAGCCACAGTTCCAGCCACGAACGCTGTTCCCTGTCCCAGTCCAGCACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp GATTCTGAACCGGACCCTGGCTTGGGAGTCCTTGGCTaGAAGCCCGTGGGTCCCTCCAAGGAGGGCACTGAT +
Preference number: 6 (lower is better)
Translates to: DSEPDPGLGVLG*KPVGPSKEGTD
Trigger: ATCAGTGCCCTCCTTGGAGGGACCCACGGGCTTCCAGCCAAGGACTCCCAAGCCAGGGTCCGGTTCAGAATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp TCCTCTCCTTCCCTGATTCTGAACCGGACCCTGGCTTaGGAGTCCTTGGCTGGAAGCCCGTGGGTCCCTCCA +
Preference number: 6 (lower is better)
Translates to: SSPSLILNRTLA*ESLAGSPWVPP
Trigger: TGGAGGGACCCACGGGCTTCCAGCCAAGGACTCCCAAGCCAGGGTCCGGTTCAGAATCAGGGAAGGAGAGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp GGGAGCTGGGCAAGTGTCTGGCTGCGCTGGGGCCATTaGAACTCCTCAGTCTTCTCAGGTTCCTTAGGGGGC +
Preference number: 6 (lower is better)
Translates to: GSWASVWLRWGH*NSSVFSGSLGG
Trigger: GCCCCCTAAGGAACCTGAGAAGACTGAGGAGTTCCAATGGCCCCAGCGCAGCCAGACACTTGCCCAGCTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp CTGGGCCCTTGCCTCCCGGGGGTCCACCATGTGAGGTaGCCGCAGAGGAAATCTGGGACAATGAGCTTTTGG +
Preference number: 6 (lower is better)
Translates to: LGPCLPGVHHVR*PQRKSGTMSFW
Trigger: CCAAAAGCTCATTGTCCCAGATTTCCTCTGCGGCCACCTCACATGGTGGACCCCCGGGAGGCAAGGGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp TCCTGGTGGGCGAGTATCTGGGGAGGCCTGGGTCGGTaGTACCCTCGAGTTTGGAGAGCACATGTGCTCGAG +
Preference number: 6 (lower is better)
Translates to: SWWASIWGGLGR*YPRVWRAHVLE
Trigger: CTCGAGCACATGTGCTCTCCAAACTCGAGGGTACCACCGACCCAGGCCTCCCCAGATACTCGCCCACCAGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 72 bp AAGATGTTCTCCTCTGTCCGGGCCAGGATGTGGCCGTaGAAGTCATGGAGGGCGGAGAAGGGTCGGGAGGAG +
Preference number: 6 (lower is better)
Translates to: KMFSSVRARMWP*KSWRAEKGREE
Trigger: CTCCTCCCGACCCTTCTCCGCCCTCCATGACTTCCACGGCCACATCCTGGCCCGGACAGAGGAGAACATCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 72 bp TGGCTGAAGATGTTCTCCTCTGTCCGGGCCAGGATGTaGCCGTGGAAGTCATGGAGGGCGGAGAAGGGTCGG +
Preference number: 6 (lower is better)
Translates to: WLKMFSSVRARM*PWKSWRAEKGR
Trigger: CCGACCCTTCTCCGCCCTCCATGACTTCCACGGCCACATCCTGGCCCGGACAGAGGAGAACATCTTCAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CAA 72 bp ACTCCATGCTGCTGCGCCTGGACAGTGAGCTCCGCCTaGGCTTCACGCTGTCGATCTCGCTGGTGTCCACCA +
Preference number: 6 (lower is better)
Translates to: TPCCCAWTVSSA*ASRCRSRWCPP
Trigger: TGGTGGACACCAGCGAGATCGACAGCGTGAAGCCAAGGCGGAGCTCACTGTCCAGGCGCAGCAGCATGGAGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 72 bp GGATTTTGGGGACTCCATGCTGCTGCGCCTGGACAGTaGGCTCCGCCTTGGCTTCACGCTGTCGATCTCGCT +
Preference number: 6 (lower is better)
Translates to: GFWGLHAAAPGQ*APPWLHAVDLA
Trigger: AGCGAGATCGACAGCGTGAAGCCAAGGCGGAGCTCACTGTCCAGGCGCAGCAGCATGGAGTCCCCAAAATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 72 bp TGGCGCTTCAGCATCCGGGGGTGGGAGGTAAACACGTaGCTGCTGTGGCTCAGGGCTTCGGAGTCGGTGATA +
Preference number: 6 (lower is better)
Translates to: WRFSIRGWEVNT*LLWLRASESVI
Trigger: TATCACCGACTCCGAAGCCCTGAGCCACAGCAGTCACGTGTTTACCTCCCACCCCCGGATGCTGAAGCGCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 72 bp GGCCAGGACCCCGCGAGGCTCCTCCATGAACTAGGTTaGGGCTGCTGGGTTTGTGCCTCGAATCCTGCCAAA +
Preference number: 6 (lower is better)
Translates to: GQDPARLLHELG*GCWVCASNPAK
Trigger: TTTGGCAGGATTCGAGGCACAAACCCAGCAGCCTCAACCTAGTTCATGGAGGAGCCTCGCGGGGTCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS GCA 72 bp GCAGCTTCTCAGCTGGGAGCTGGGCAAGTGTCTGGCTaGGCTGGGGCCATTGGAACTCCTCAGTCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: AASQLGAGQVSG*AGAIGTPQSSQ
Trigger: CTGAGAAGACTGAGGAGTTCCAATGGCCCCAGCGCAGCCAGACACTTGCCCAGCTCCCAGCTGAGAAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp ACGAGGCTGAGCGGCTGGACCCACTCAAAGAGACATTaGTTTCCTGGCTCGGGCTGCGAGACAGAGGCACAG +
Preference number: 6 (lower is better)
Translates to: TRLSGWTHSKRH*FPGSGCETEAQ
Trigger: CTGTGCCTCTGTCTCGCAGCCCGAGCCAGGAAAGCAATGTCTCTTTGAGTGGGTCCAGCCGCTCAGCCTCGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp GGTCATGGCTGGTACTTCTACCCTTCGTGGGCCGCATaGCTCCAGCTCCAGCTCTTCTTGGGGCTCCAGAGT +
Preference number: 6 (lower is better)
Translates to: GHGWYFYPSWAA*LQLQLFLGLQS
Trigger: ACTCTGGAGCCCCAAGAAGAGCTGGAGCTGGAGGCATGCGGCCCACGAAGGGTAGAAGTACCAGCCATGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS CCA 72 bp CCCTGGTCCTGGCACAAGAGATGCCACGCTGGATGCTaGGGGTGGCTCTTCTCCCCTTTAGTTCTGGGTTGG +
Preference number: 6 (lower is better)
Translates to: PWSWHKRCHAGC*GWLFSPLVLGW
Trigger: CCAACCCAGAACTAAAGGGGAGAAGAGCCACCCCCAGCATCCAGCGTGGCATCTCTTGTGCCAGGACCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp AGACATCTGTGTCCATGGCCCAGTCATCCCTGGTCCTaGCACAAGAGATGCCACGCTGGATGCTGGGGGTGG +
Preference number: 6 (lower is better)
Translates to: RHLCPWPSHPWS*HKRCHAGCWGW
Trigger: CCACCCCCAGCATCCAGCGTGGCATCTCTTGTGCCAGGACCAGGGATGACTGGGCCATGGACACAGATGTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp GGGTGGCAGCTGTGCCGCTGCCTGGGTATGGGACGCTaGAAGAAACACTGGTCTGAATGGCCTCTCCTTTGG +
Preference number: 6 (lower is better)
Translates to: GWQLCRCLGMGR*KKHWSEWPLLW
Trigger: CCAAAGGAGAGGCCATTCAGACCAGTGTTTCTTCCAGCGTCCCATACCCAGGCAGCGGCACAGCTGCCACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp GCTCTCTTGGGTGGCAGCTGTGCCGCTGCCTGGGTATaGGACGCTGGAAGAAACACTGGTCTGAATGGCCTC +
Preference number: 6 (lower is better)
Translates to: ALLGGSCAAAWV*DAGRNTGLNGL
Trigger: GAGGCCATTCAGACCAGTGTTTCTTCCAGCGTCCCATACCCAGGCAGCGGCACAGCTGCCACCCAAGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp AGGGTCCAGGTCTCATGGGGTCAACCAGTTGCCATGTaGACCCCTCCAGGAGATGCTCAGGTTTGCCAGGCG +
Preference number: 6 (lower is better)
Translates to: RVQVSWGQPVAM*TPPGDAQVCQA
Trigger: CGCCTGGCAAACCTGAGCATCTCCTGGAGGGGTCCACATGGCAACTGGTTGACCCCATGAGACCTGGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp AGAGGCTGGATTTTGGGGACTCCATGCTGCTGCGCCTaGACAGTGAGCTCCGCCTTGGCTTCACGCTGTCGA +
Preference number: 6 (lower is better)
Translates to: RGWILGTPCCCA*TVSSALASRCR
Trigger: TCGACAGCGTGAAGCCAAGGCGGAGCTCACTGTCCAGGCGCAGCAGCATGGAGTCCCCAAAATCCAGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp GCTCGCTTTCCTTGGGTTCCACTTCGTCCGAGGGCTTaGAGGCTGTGTCTTTGCTGCTTGGGCCAGGCTCCT +
Preference number: 6 (lower is better)
Translates to: ARFPWVPLRPRA*RLCLCCLGQAP
Trigger: AGGAGCCTGGCCCAAGCAGCAAAGACACAGCCTCCAAGCCCTCGGACGAAGTGGAACCCAAGGAAAGCGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp CGGACCCTGGCTTGGGAGTCCTTGGCTGGAAGCCCGTaGGTCCCTCCAAGGAGGGCACTGATTTACTTGGTT +
Preference number: 6 (lower is better)
Translates to: RTLAWESLAGSP*VPPRRALIYLV
Trigger: AACCAAGTAAATCAGTGCCCTCCTTGGAGGGACCCACGGGCTTCCAGCCAAGGACTCCCAAGCCAGGGTCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp GAGCGGCTGGACCCACTCAAAGAGACATTGCTTTCCTaGCTCGGGCTGCGAGACAGAGGCACAGAGGACTCG +
Preference number: 6 (lower is better)
Translates to: ERLDPLKETLLS*LGLRDRGTEDS
Trigger: CGAGTCCTCTGTGCCTCTGTCTCGCAGCCCGAGCCAGGAAAGCAATGTCTCTTTGAGTGGGTCCAGCCGCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp ATCTGGGGAGGCCTGGGTCGGTGGTACCCTCGAGTTTaGAGAGCACATGTGCTCGAGGGGCCAGTTCTCTTC +
Preference number: 6 (lower is better)
Translates to: IWGGLGRWYPRV*RAHVLEGPVLF
Trigger: GAAGAGAACTGGCCCCTCGAGCACATGTGCTCTCCAAACTCGAGGGTACCACCGACCCAGGCCTCCCCAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 72 bp AGACCATCTCCTGGTGGGCGAGTATCTGGGGAGGCCTaGGTCGGTGGTACCCTCGAGTTTGGAGAGCACATG +
Preference number: 6 (lower is better)
Translates to: RPSPGGRVSGEA*VGGTLEFGEHM
Trigger: CATGTGCTCTCCAAACTCGAGGGTACCACCGACCCAGGCCTCCCCAGATACTCGCCCACCAGGAGATGGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 72 bp AGGGCTCTTGGTCATGGCTGGTACTTCTACCCTTCGTaGGCCGCATGCCTCCAGCTCCAGCTCTTCTTGGGG +
Preference number: 6 (lower is better)
Translates to: RALGHGWYFYPS*AACLQLQLFLG
Trigger: CCCCAAGAAGAGCTGGAGCTGGAGGCATGCGGCCCACGAAGGGTAGAAGTACCAGCCATGACCAAGAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS CAA 72 bp GGCGGGTGCTGGAGGCTCAGCAGTGATTGTTCAGGCTaGGTTTTCTCACTGTGGGATGACAGGGGCTCCCGG +
Preference number: 6 (lower is better)
Translates to: GGCWRLSSDCSG*VFSLWDDRGSR
Trigger: CCGGGAGCCCCTGTCATCCCACAGTGAGAAAACCAAGCCTGAACAATCACTGCTGAGCCTCCAGCACCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp CCTTCGTGGGCCGCATGCCTCCAGCTCCAGCTCTTCTaGGGGCTCCAGAGTGTGCCAGTTTCCCTTCAAGCA +
Preference number: 6 (lower is better)
Translates to: PSWAACLQLQLF*GLQSVPVSLQA
Trigger: TGCTTGAAGGGAAACTGGCACACTCTGGAGCCCCAAGAAGAGCTGGAGCTGGAGGCATGCGGCCCACGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS CAA 90 bp AGTGGCAGGTGGCCCCCACGAGTCCCCCGTGTGCTATGCAAACGGTaGAAGGTTGGAGACATCTGTGTCCATGGCCCAGTCATCCCTGGT +
Preference number: 6 (lower is better)
Translates to: SGRWPPRVPRVLCKR*KVGDICVHGPVIPG
Trigger: ACCAGGGATGACTGGGCCATGGACACAGATGTCTCCAACCTTCAACCGTTTGCATAGCACACGGGGGACTCGTGGGGGCCACCTGCCACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp CTTGGCTTCACGCTGTCGATCTCGCTGGTGTCCACCACGGCCTCGTaGATGGTGATGAGCTTCGTGATGTGCTCGATCACCTGCGTCCGG +
Preference number: 6 (lower is better)
Translates to: LGFTLSISLVSTTAS*MVMSFVMCSITCVR
Trigger: CCGGACGCAGGTGATCGAGCACATCACGAAGCTCATCACCATCAACGAGGCCGTGGTGGACACCAGCGAGATCGACAGCGTGAAGCCAAG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp TCCTCTCCTTCCCTGATTCTGAACCGGACCCTGGCTTGGGAGTCCTaGGCTGGAAGCCCGTGGGTCCCTCCAAGGAGGGCACTGATTTAC +
Preference number: 6 (lower is better)
Translates to: SSPSLILNRTLAWES*AGSPWVPPRRALIY
Trigger: GTAAATCAGTGCCCTCCTTGGAGGGACCCACGGGCTTCCAGCCAAGGACTCCCAAGCCAGGGTCCGGTTCAGAATCAGGGAAGGAGAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 72 bp GGCCCCCACGAGTCCCCCGTGTGCTATGCAAACGGTTaGAGGTTGGAGACATCTGTGTCCATGGCCCAGTCA +
Preference number: 6 (lower is better)
Translates to: GPHESPVCYANG*RLETSVSMAQS
Trigger: TGACTGGGCCATGGACACAGATGTCTCCAACCTTCAACCGTTTGCATAGCACACGGGGGACTCGTGGGGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 72 bp CTGCCTGGGTATGGGACGCTGGAAGAAACACTGGTCTaGATGGCCTCTCCTTTGGTCAGCCGCTTCCGGGGA +
Preference number: 6 (lower is better)
Translates to: LPGYGTLEETLV*MASPLVSRFRG
Trigger: TCCCCGGAAGCGGCTGACCAAAGGAGAGGCCATTCAGACCAGTGTTTCTTCCAGCGTCCCATACCCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 72 bp ACCCCTCCAGGAGATGCTCAGGTTTGCCAGGCGACATaGATGCTGGTGTCAGAGGGTGCTGCGGAAGCTGTG +
Preference number: 6 (lower is better)
Translates to: TPPGDAQVCQAT*MLVSEGAAEAV
Trigger: CACAGCTTCCGCAGCACCCTCTGACACCAGCATTCATGTCGCCTGGCAAACCTGAGCATCTCCTGGAGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 72 bp CGGTCTTCTTGGGGACACAGGCTTGTAGCTCAAGGCTaGGCCTGTGTCTTTCTCCACAGAGCCCAGAGGGGC +
Preference number: 6 (lower is better)
Translates to: RSSWGHRLVAQG*ACVFLHRAQRG
Trigger: GCCCCTCTGGGCTCTGTGGAGAAAGACACAGGCTCAGCCTTGAGCTACAAGCCTGTGTCCCCAAGAAGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS TCA 72 bp ACTAGGCAGCTGGATAATGGGAGAGTCGGCTGGTTGTaGGCATGCTCGCGCCGGGAACAGATCCACCCTCTG +
Preference number: 6 (lower is better)
Translates to: TRQLDNGRVGWL*ACSRREQIHPL
Trigger: CAGAGGGTGGATCTGTTCCCGGCGCGAGCATGCTCACAACCAGCCGACTCTCCCATTATCCAGCTGCCTAGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS GCA 72 bp CATCCCTGGTCCTGGCACAAGAGATGCCACGCTGGATaGTGGGGGTGGCTCTTCTCCCCTTTAGTTCTGGGT +
Preference number: 6 (lower is better)
Translates to: HPWSWHKRCHAG*WGWLFSPLVLG
Trigger: ACCCAGAACTAAAGGGGAGAAGAGCCACCCCCAGCATCCAGCGTGGCATCTCTTGTGCCAGGACCAGGGATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp GAGCCAGAGGGTCCAGGTCTCATGGGGTCAACCAGTTaGCATGTGGACCCCTCCAGGAGATGCTCAGGTTTG +
Preference number: 6 (lower is better)
Translates to: EPEGPGLMGSTS*HVDPSRRCSGL
Trigger: CAAACCTGAGCATCTCCTGGAGGGGTCCACATGGCAACTGGTTGACCCCATGAGACCTGGACCCTCTGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp CCACTTCGTCCGAGGGCTTGGAGGCTGTGTCTTTGCTaGTTGGGCCAGGCTCCTCAGAACTGTATTCCCCTC +
Preference number: 6 (lower is better)
Translates to: PLRPRAWRLCLC*LGQAPQNCIPL
Trigger: GAGGGGAATACAGTTCTGAGGAGCCTGGCCCAAGCAGCAAAGACACAGCCTCCAAGCCCTCGGACGAAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp TCGGTCATGTGGGCAGAATGGGAAACGTTGGGGCTCTaGTCTGAGGCTGACCTCCGCATCTCTCGGGCATGT +
Preference number: 6 (lower is better)
Translates to: SVMWAEWETLGL*SEADLRISRAC
Trigger: ACATGCCCGAGAGATGCGGAGGTCAGCCTCAGAGCAGAGCCCCAACGTTTCCCATTCTGCCCACATGACCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp GGTTGGAGACATCTGTGTCCATGGCCCAGTCATCCCTaGTCCTGGCACAAGAGATGCCACGCTGGATGCTGG +
Preference number: 6 (lower is better)
Translates to: GWRHLCPWPSHP*SWHKRCHAGCW
Trigger: CCAGCATCCAGCGTGGCATCTCTTGTGCCAGGACCAGGGATGACTGGGCCATGGACACAGATGTCTCCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp TGCCGCTGCCTGGGTATGGGACGCTGGAAGAAACACTaGTCTGAATGGCCTCTCCTTTGGTCAGCCGCTTCC +
Preference number: 6 (lower is better)
Translates to: CRCLGMGRWKKH*SEWPLLWSAAS
Trigger: GGAAGCGGCTGACCAAAGGAGAGGCCATTCAGACCAGTGTTTCTTCCAGCGTCCCATACCCAGGCAGCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp GCGGGTGCTGGAGGCTCAGCAGTGATTGTTCAGGCTTaGTTTTCTCACTGTGGGATGACAGGGGCTCCCGGT +
Preference number: 6 (lower is better)
Translates to: AGAGGSAVIVQA*FSHCGMTGAPG
Trigger: ACCGGGAGCCCCTGTCATCCCACAGTGAGAAAACCAAGCCTGAACAATCACTGCTGAGCCTCCAGCACCCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp TTCTCAGCTGGGAGCTGGGCAAGTGTCTGGCTGCGCTaGGGCCATTGGAACTCCTCAGTCTTCTCAGGTTCC +
Preference number: 6 (lower is better)
Translates to: FSAGSWASVWLR*GHWNSSVFSGS
Trigger: GGAACCTGAGAAGACTGAGGAGTTCCAATGGCCCCAGCGCAGCCAGACACTTGCCCAGCTCCCAGCTGAGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp TGCGTGTCTCGGTCATGTGGGCAGAATGGGAAACGTTaGGGCTCTGCTCTGAGGCTGACCTCCGCATCTCTC +
Preference number: 6 (lower is better)
Translates to: CVSRSCGQNGKR*GSALRLTSASL
Trigger: GAGAGATGCGGAGGTCAGCCTCAGAGCAGAGCCCCAACGTTTCCCATTCTGCCCACATGACCGAGACACGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp TCTAGCTCCCTCCTGCCTTGGCCCTGGTTGCCTAAGTaGGATTTCTCTGGCCTCTTCCCATCCTCGGTGCTG +
Preference number: 6 (lower is better)
Translates to: SSSLLPWPWLPK*DFSGLFPSSVL
Trigger: CAGCACCGAGGATGGGAAGAGGCCAGAGAAATCCCACTTAGGCAACCAGGGCCAAGGCAGGAGGGAGCTAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp AGGCTGGCCTCCTTCACGGCCACCTTCCTCCAGGGGTaGATCCGTGTTCCAGTCACCTCCAAACACACAAAG +
Preference number: 6 (lower is better)
Translates to: RLASFTATFLQG*IRVPVTSKHTK
Trigger: CTTTGTGTGTTTGGAGGTGACTGGAACACGGATCCACCCCTGGAGGAAGGTGGCCGTGAAGGAGGCCAGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000489103.5
ENST00000491442.5
CDS CAA 72 bp TGGCCCCCACGAGTCCCCCGTGTGCTATGCAAACGGTaGAAGGTTGGAGACATCTGTGTCCATGGCCCAGTC +
Preference number: 6 (lower is better)
Translates to: WPPRVPRVLCKR*KVGDICVHGPV
Trigger: GACTGGGCCATGGACACAGATGTCTCCAACCTTCAACCGTTTGCATAGCACACGGGGGACTCGTGGGGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp GGAGCCAGAGGGTCCAGGTCTCATGGGGTCAACCAGTaGCCATGTGGACCCCTCCAGGAGATGCTCAGGTTT +
Preference number: 6 (lower is better)
Translates to: GARGSRSHGVNQ*PCGPLQEMLRF
Trigger: AAACCTGAGCATCTCCTGGAGGGGTCCACATGGCAACTGGTTGACCCCATGAGACCTGGACCCTCTGGCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp CCTCAGAACTGTATTCCCCTCCCAAAGGTAATTCGATaGCCGGCTGGCGCTTCAGCATCCGGGGGTGGGAGG +
Preference number: 6 (lower is better)
Translates to: PQNCIPLPKVIR*PAGASASGGGR
Trigger: CCTCCCACCCCCGGATGCTGAAGCGCCAGCCGGCAATCGAATTACCTTTGGGAGGGGAATACAGTTCTGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp CTTCGTCCGAGGGCTTGGAGGCTGTGTCTTTGCTGCTaGGGCCAGGCTCCTCAGAACTGTATTCCCCTCCCA +
Preference number: 6 (lower is better)
Translates to: LRPRAWRLCLCC*GQAPQNCIPLP
Trigger: TGGGAGGGGAATACAGTTCTGAGGAGCCTGGCCCAAGCAGCAAAGACACAGCCTCCAAGCCCTCGGACGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp GGCTGCCTGCTTCTTTGCTTGGGGACCACGGTCTTCTaGGGGACACAGGCTTGTAGCTCAAGGCTGAGCCTG +
Preference number: 6 (lower is better)
Translates to: GCLLLCLGTTVF*GTQACSSRLSL
Trigger: CAGGCTCAGCCTTGAGCTACAAGCCTGTGTCCCCAAGAAGACCGTGGTCCCCAAGCAAAGAAGCAGGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CAA 72 bp TATCTGGGGAGGCCTGGGTCGGTGGTACCCTCGAGTTaGGAGAGCACATGTGCTCGAGGGGCCAGTTCTCTT +
Preference number: 6 (lower is better)
Translates to: YLGRPGSVVPSS*ESTCARGASSL
Trigger: AAGAGAACTGGCCCCTCGAGCACATGTGCTCTCCAAACTCGAGGGTACCACCGACCCAGGCCTCCCCAGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CAA 90 bp GGTCCCTCCAAGGAGGGCACTGATTTACTTGGTTCTGCTGGTGACTaGGTGGACTCCAGGGGAAGGTTCCGAGCAGCATCAGATGGCCCG +
Preference number: 6 (lower is better)
Translates to: GPSKEGTDLLGSAGD*VDSRGRFRAASDGP
Trigger: CGGGCCATCTGATGCTGCTCGGAACCTTCCCCTGGAGTCCACCAAGTCACCAGCAGAACCAAGTAAATCAGTGCCCTCCTTGGAGGGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp TCCCCTGATGATTGGGCCATCTCTGCCAGGCGCAACCTCTTCTTTTaGGGTGGCAGCTTCTCAGCTGGGAGCTGGGCAAGTGTCTGGCTG +
Preference number: 6 (lower is better)
Translates to: SPDDWAISARRNLFF*GGSFSAGSWASVWL
Trigger: CAGCCAGACACTTGCCCAGCTCCCAGCTGAGAAGCTGCCACCCAAAAAGAAGAGGTTGCGCCTGGCAGAGATGGCCCAATCATCAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp GACAGGCTGGACAGCATTTCTAGCTCCCTCCTGCCTTGGCCCTGGTaGCCTAAGTGGGATTTCTCTGGCCTCTTCCCATCCTCGGTGCTG +
Preference number: 6 (lower is better)
Translates to: DRLDSISSSLLPWPW*PKWDFSGLFPSSVL
Trigger: CAGCACCGAGGATGGGAAGAGGCCAGAGAAATCCCACTTAGGCAACCAGGGCCAAGGCAGGAGGGAGCTAGAAATGCTGTCCAGCCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp GTGGTGGACGGCTGCCTGCTTCTTTGCTTGGGGACCACGGTCTTCTaGGGGACACAGGCTTGTAGCTCAAGGCTGAGCCTGTGTCTTTCT +
Preference number: 6 (lower is better)
Translates to: VVDGCLLLCLGTTVF*GTQACSSRLSLCLS
Trigger: AGAAAGACACAGGCTCAGCCTTGAGCTACAAGCCTGTGTCCCCAAGAAGACCGTGGTCCCCAAGCAAAGAAGCAGGCAGCCGTCCACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS GCA 72 bp AGTGGCAGGTGGCCCCCACGAGTCCCCCGTGTGCTATaGAAACGGTTGAAGGTTGGAGACATCTGTGTCCAT +
Preference number: 6 (lower is better)
Translates to: SGRWPPRVPRVL*KRLKVGDICVH
Trigger: ATGGACACAGATGTCTCCAACCTTCAACCGTTTGCATAGCACACGGGGGACTCGTGGGGGCCACCTGCCACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp TTGATGGTGATGAGCTTCGTGATGTGCTCGATCACCTaGGTCCGGGGTACAGACAAAGGCACCAGGCTGGGC +
Preference number: 6 (lower is better)
Translates to: LMVMSFVMCSIT*VRGTDKGTRLG
Trigger: GCCCAGCCTGGTGCCTTTGTCTGTACCCCGGACGCAGGTGATCGAGCACATCACGAAGCTCATCACCATCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp ACCACGGCCTCGTTGATGGTGATGAGCTTCGTGATGTaGTCGATCACCTGCGTCCGGGGTACAGACAAAGGC +
Preference number: 6 (lower is better)
Translates to: TTASLMVMSFVM*SITCVRGTDKG
Trigger: GCCTTTGTCTGTACCCCGGACGCAGGTGATCGAGCACATCACGAAGCTCATCACCATCAACGAGGCCGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp TGGTTAGCGAGTGTTTGCGGGCTAGTGGTGGACGGCTaGCTGCTTCTTTGCTTGGGGACCACGGTCTTCTTG +
Preference number: 6 (lower is better)
Translates to: WLASVCGLVVDG*LLLCLGTTVFL
Trigger: CAAGAAGACCGTGGTCCCCAAGCAAAGAAGCAGGCAGCCGTCCACCACTAGCCCGCAAACACTCGCTAACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS GCA 72 bp GCCTCCAGCTCCAGCTCTTCTTGGGGCTCCAGAGTGTaGCAGTTTCCCTTCAAGCACCAGTGTCCTCAACCT +
Preference number: 6 (lower is better)
Translates to: ASSSSSSWGSRV*QFPFKHQCPQP
Trigger: AGGTTGAGGACACTGGTGCTTGAAGGGAAACTGGCACACTCTGGAGCCCCAAGAAGAGCTGGAGCTGGAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS CCA 72 bp CGCTGGAAGAAACACTGGTCTGAATGGCCTCTCCTTTaGTCAGCCGCTTCCGGGGACTTCCCTCAGCCTTCT +
Preference number: 6 (lower is better)
Translates to: RWKKHWSEWPLL*SAASGDFPQPS
Trigger: AGAAGGCTGAGGGAAGTCCCCGGAAGCGGCTGACCAAAGGAGAGGCCATTCAGACCAGTGTTTCTTCCAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp CTGGGTATGGGACGCTGGAAGAAACACTGGTCTGAATaGCCTCTCCTTTGGTCAGCCGCTTCCGGGGACTTC +
Preference number: 6 (lower is better)
Translates to: LGMGRWKKHWSE*PLLWSAASGDF
Trigger: GAAGTCCCCGGAAGCGGCTGACCAAAGGAGAGGCCATTCAGACCAGTGTTTCTTCCAGCGTCCCATACCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp CTGTATTCCCCTCCCAAAGGTAATTCGATTGCCGGCTaGCGCTTCAGCATCCGGGGGTGGGAGGTAAACACG +
Preference number: 6 (lower is better)
Translates to: LYSPPKGNSIAG*RFSIRGWEVNT
Trigger: CGTGTTTACCTCCCACCCCCGGATGCTGAAGCGCCAGCCGGCAATCGAATTACCTTTGGGAGGGGAATACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp GGGGCATGGAGTATGGTGAGGACAGGAGGCTGGACATaGCCTGGGTGGAGAAGAATTCTGGAGACTGTCCTG +
Preference number: 6 (lower is better)
Translates to: GAWSMVRTGGWT*PGWRRILETVL
Trigger: CAGGACAGTCTCCAGAATTCTTCTCCACCCAGGCCATGTCCAGCCTCCTGTCCTCACCATACTCCATGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp TCCACAGCCTCTGAACCCTCTCGTCCTTCCGAGTCCTaGAACAGGTCGTCACTGGTTCCTTCTTCGGCTTCC +
Preference number: 6 (lower is better)
Translates to: STASEPSRPSES*NRSSLVPSSAS
Trigger: GGAAGCCGAAGAAGGAACCAGTGACGACCTGTTCCAGGACTCGGAAGGACGAGAGGGTTCAGAGGCTGTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 72 bp ATGGGAATCAAGGGACATGGGGCACGGGTCAAGTGCTaGGAGTGCAGAGGCAGGTGGCTGAAGATGTTCTCC +
Preference number: 6 (lower is better)
Translates to: MGIKGHGARVKC*ECRGRWLKMFS
Trigger: GGAGAACATCTTCAGCCACCTGCCTCTGCACTCCCAGCACTTGACCCGTGCCCCATGTCCCTTGATTCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CAA 72 bp ACGCTGTCGATCTCGCTGGTGTCCACCACGGCCTCGTaGATGGTGATGAGCTTCGTGATGTGCTCGATCACC +
Preference number: 6 (lower is better)
Translates to: TLSISLVSTTAS*MVMSFVMCSIT
Trigger: GGTGATCGAGCACATCACGAAGCTCATCACCATCAACGAGGCCGTGGTGGACACCAGCGAGATCGACAGCGT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp CAGCATCAGATGGCCCGGGGCTGCCAAACTGACTTTTaGTGGACTCAAAGGCAGGTGGCTCTTCCTCGTCCC +
Preference number: 6 (lower is better)
Translates to: QHQMARGCQTDF*WTQRQVALPRP
Trigger: GGGACGAGGAAGAGCCACCTGCCTTTGAGTCCACAAAAAGTCAGTTTGGCAGCCCCGGGCCATCTGATGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp CTTTCCTTGGGTTCCACTTCGTCCGAGGGCTTGGAGGCTGTGTCTTaGCTGCTTGGGCCAGGCTCCTCAGAACTGTATTCCCCTCCCAAA +
Preference number: 6 (lower is better)
Translates to: LSLGSTSSEGLEAVS*LLGPGSSELYSPPK
Trigger: TTTGGGAGGGGAATACAGTTCTGAGGAGCCTGGCCCAAGCAGCAAAGACACAGCCTCCAAGCCCTCGGACGAAGTGGAACCCAAGGAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp GGTTTACTGGATGAGGGCTGTGGTTCTTCGCTCTCCTGTCTTCCCTaGGGGGCAACCTCCAACTCAGATTCTGGAGGCCTGCTCAGAGAG +
Preference number: 6 (lower is better)
Translates to: GLLDEGCGSSLSCLP*GATSNSDSGGLLRE
Trigger: CTCTCTGAGCAGGCCTCCAGAATCTGAGTTGGAGGTTGCCCCCAAGGGAAGACAGGAGAGCGAAGAACCACAGCCCTCATCCAGTAAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp CGGGCCCAACCTCATGCACATCTGCACCACATACAGTCGTCCCCTTaGATGGGGGTTCCTCAAACTTGGGAAGTGCCACAGTTGCTGAGC +
Preference number: 6 (lower is better)
Translates to: RAQPHAHLHHIQSSP*MGVPQTWEVPQLLS
Trigger: GCTCAGCAACTGTGGCACTTCCCAAGTTTGAGGAACCCCCATCAAAGGGGACGACTGTATGTGGTGCAGATGTGCATGAGGTTGGGCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp GGCAGAGAGCTCGGAGGTGCCAAGGAGGGGAGATCAGGTTGTTCCTaGGAATCTTCTTTCTTCACGCTCAGTGGGGTCAACCCTCTTCGG +
Preference number: 6 (lower is better)
Translates to: GRELGGAKEGRSGCS*ESSFFTLSGVNPLR
Trigger: CCGAAGAGGGTTGACCCCACTGAGCGTGAAGAAAGAAGATTCCAAGGAACAACCTGATCTCCCCTCCTTGGCACCTCCGAGCTCTCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 72 bp CGGTCCGCTGTCCTATTCGCCCACACTTGCCAAAGATaGTCTCAGCGTAGGACTTGGCGTTGGTGTTTGGGG +
Preference number: 6 (lower is better)
Translates to: RSAVLFAHTCQR*SQRRTWRWCLG
Trigger: CCCCAAACACCAACGCCAAGTCCTACGCTGAGATCATCTTTGGCAAGTGTGGGCGAATAGGACAGCGGACCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 72 bp ACACGTGACTGCTGTGGCTCAGGGCTTCGGAGTCGGTaGTATGGTCATCGAAGGAGTAGCTACCTCGGAAGG +
Preference number: 6 (lower is better)
Translates to: TRDCCGSGLRSR*YGHRRSSYLGR
Trigger: CCTTCCGAGGTAGCTACTCCTTCGATGACCATATCACCGACTCCGAAGCCCTGAGCCACAGCAGTCACGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 72 bp TTCCGAGCAGCATCAGATGGCCCGGGGCTGCCAAACTaGCTTTTTGTGGACTCAAAGGCAGGTGGCTCTTCC +
Preference number: 6 (lower is better)
Translates to: FRAASDGPGLPN*LFVDSKAGGSS
Trigger: GGAAGAGCCACCTGCCTTTGAGTCCACAAAAAGTCAGTTTGGCAGCCCCGGGCCATCTGATGCTGCTCGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 72 bp TGGGGGTTCCTCAAACTTGGGAAGTGCCACAGTTGCTaGGCTGCCTTGGGACTGGGTGACCAAGATCTGGGA +
Preference number: 6 (lower is better)
Translates to: WGFLKLGKCHSC*AALGLGDQDLG
Trigger: TCCCAGATCTTGGTCACCCAGTCCCAAGGCAGCTCAGCAACTGTGGCACTTCCCAAGTTTGAGGAACCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp CTGGGGCTGGAGCAGAAGGGCCTGTCAAGGACAAGCTaGCATAGTCAAAGGATTTGCTGCGTGTCTCGGTCA +
Preference number: 6 (lower is better)
Translates to: LGLEQKGLSRTS*HSQRICCVSRS
Trigger: TGACCGAGACACGCAGCAAATCCTTTGACTATGGCAGCTTGTCCTTGACAGGCCCTTCTGCTCCAGCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp TCCTGGCACAAGAGATGCCACGCTGGATGCTGGGGGTaGCTCTTCTCCCCTTTAGTTCTGGGTTGGAGATCA +
Preference number: 6 (lower is better)
Translates to: SWHKRCHAGCWG*LFSPLVLGWRS
Trigger: TGATCTCCAACCCAGAACTAAAGGGGAGAAGAGCCACCCCCAGCATCCAGCGTGGCATCTCTTGTGCCAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp TATTGCCATTGTATTGTTTCAGCTGGCAGTGGCAGGTaGCCCCCACGAGTCCCCCGTGTGCTATGCAAACGG +
Preference number: 6 (lower is better)
Translates to: YCHCIVSAGSGR*PPRVPRVLCKR
Trigger: CCGTTTGCATAGCACACGGGGGACTCGTGGGGGCCACCTGCCACTGCCAGCTGAAACAATACAATGGCAATA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp AAGGATTTGCTGCGTGTCTCGGTCATGTGGGCAGAATaGGAAACGTTGGGGCTCTGCTCTGAGGCTGACCTC +
Preference number: 6 (lower is better)
Translates to: KDLLRVSVMWAE*ETLGLCSEADL
Trigger: GAGGTCAGCCTCAGAGCAGAGCCCCAACGTTTCCCATTCTGCCCACATGACCGAGACACGCAGCAAATCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp CTGTCTTCCCTTGGGGGCAACCTCCAACTCAGATTCTaGAGGCCTGCTCAGAGAGGCCTGTCTCACCAAGAA +
Preference number: 6 (lower is better)
Translates to: LSSLGGNLQLRF*RPAQRGLSHQE
Trigger: TTCTTGGTGAGACAGGCCTCTCTGAGCAGGCCTCCAGAATCTGAGTTGGAGGTTGCCCCCAAGGGAAGACAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp GGGTGGTGTACATTGCGCTCCCATAGGACGGCATATTaGTCTGAACACGGACAGGCACAACCAGGGACACCA +
Preference number: 6 (lower is better)
Translates to: GWCTLRSHRTAY*SEHGQAQPGTP
Trigger: TGGTGTCCCTGGTTGTGCCTGTCCGTGTTCAGACCAATATGCCGTCCTATGGGAGCGCAATGTACACCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp TTGGTCAGCCGCTTCCGGGGACTTCCCTCAGCCTTCTaGGTGCCCTTGACACTTTGTTCAGGATCCATGACC +
Preference number: 6 (lower is better)
Translates to: LVSRFRGLPSAF*VPLTLCSGSMT
Trigger: GGTCATGGATCCTGAACAAAGTGTCAAGGGCACCAAGAAGGCTGAGGGAAGTCCCCGGAAGCGGCTGACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp CCACGCTGGATGCTGGGGGTGGCTCTTCTCCCCTTTAGTTCTGGGTaGGAGATCAACGGCCTTGGAGGAGAAATCACGCTCTTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: PRWMLGVALLPFSSG*EINGLGGEITLFFC
Trigger: ACAGAAGAAGAGCGTGATTTCTCCTCCAAGGCCGTTGATCTCCAACCCAGAACTAAAGGGGAGAAGAGCCACCCCCAGCATCCAGCGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp TGGGTTCCACTTCGTCCGAGGGCTTGGAGGCTGTGTCTTTGCTGCTaGGGCCAGGCTCCTCAGAACTGTATTCCCCTCCCAAAGGTAATT +
Preference number: 6 (lower is better)
Translates to: WVPLRPRAWRLCLCC*GQAPQNCIPLPKVI
Trigger: AATTACCTTTGGGAGGGGAATACAGTTCTGAGGAGCCTGGCCCAAGCAGCAAAGACACAGCCTCCAAGCCCTCGGACGAAGTGGAACCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp CCACCATGTGAGGTGGCCGCAGAGGAAATCTGGGACAATGAGCTTTaGGCAGAGGGTTTACTGGATGAGGGCTGTGGTTCTTCGCTCTCC +
Preference number: 6 (lower is better)
Translates to: PPCEVAAEEIWDNEL*AEGLLDEGCGSSLS
Trigger: GGAGAGCGAAGAACCACAGCCCTCATCCAGTAAACCCTCTGCCAAAAGCTCATTGTCCCAGATTTCCTCTGCGGCCACCTCACATGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp CAAGGCTGCCAGCTGGTGAAAGGACACGTTTGCTTCCCCCTGCTGTaGATGAACTCCCCTCCAGGCTCAAGATACTCTCTGATGACAGGG +
Preference number: 6 (lower is better)
Translates to: QGCQLVKGHVCFPLL*MNSPPGSRYSLMTG
Trigger: CCCTGTCATCAGAGAGTATCTTGAGCCTGGAGGGGAGTTCATCAACAGCAGGGGGAAGCAAACGTGTCCTTTCACCAGCTGGCAGCCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 72 bp CGGAGCAGGTCATCAGGGCCCACGCTATTCTATTGGTaGGGCATGGCCCTCTACTTTGCAGACAGAAAACGC +
Preference number: 6 (lower is better)
Translates to: RSRSSGPTLFYW*GMALYFADRKR
Trigger: GCGTTTTCTGTCTGCAAAGTAGAGGGCCATGCCTCACCAATAGAATAGCGTGGGCCCTGATGACCTGCTCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp TCAGTACTCCCTTTGCTGCCTGGGCTCAGAAACGCCTaGTCATCGATCACCTTCTTCCTCTCGCTTAAGCGG +
Preference number: 6 (lower is better)
Translates to: SVLPLLPGLRNA*SSITFFLSLKR
Trigger: CCGCTTAAGCGAGAGGAAGAAGGTGATCGATGAGCAGGCGTTTCTGAGCCCAGGCAGCAAAGGGAGTACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp CGGAGCGAGAGAAATACCCAGACTCAGTACTCCCTTTaGTGCCTGGGCTCAGAAACGCCTGCTCATCGATCA +
Preference number: 6 (lower is better)
Translates to: RSERNTQTQYSL*CLGSETPAHRS
Trigger: TGATCGATGAGCAGGCGTTTCTGAGCCCAGGCAGCAAAGGGAGTACTGAGTCTGGGTATTTCTCTCGCTCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp TCACAGGCACTCTCAGGTATGGAGTTGGGAAAGCTCTaGTTTGCTCTTCACTTAACCCAGAAGGGCCGGGCC +
Preference number: 6 (lower is better)
Translates to: SQALSGMELGKL*FALHLTQKGRA
Trigger: GGCCCGGCCCTTCTGGGTTAAGTGAAGAGCAAAGCAGAGCTTTCCCAACTCCATACCTGAGAGTGCCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp TTCTTGTGTGCCTCTTCTGTGGGCTTCAAGGAGACCTaGGAAGGACGAGGCACGAAGACTTTGGGGACTCCA +
Preference number: 6 (lower is better)
Translates to: FLCASSVGFKET*EGRGTKTLGTP
Trigger: TGGAGTCCCCAAAGTCTTCGTGCCTCGTCCTTCCCAGGTCTCCTTGAAGCCCACAGAAGAGGCACACAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp TCGCTTAAGCGGAGGGCCAGCTTCTGCTTAATCGTGTaGGTGTCTTCAGGTTTATGGCTCAGGGGGTGCTCA +
Preference number: 6 (lower is better)
Translates to: SLKRRASFCLIV*VSSGLWLRGCS
Trigger: TGAGCACCCCCTGAGCCATAAACCTGAAGACACCCACACGATTAAGCAGAAGCTGGCCCTCCGCTTAAGCGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp TCGGAGCGAGAGAAATACCCAGACTCAGTACTCCCTTaGCTGCCTGGGCTCAGAAACGCCTGCTCATCGATC +
Preference number: 6 (lower is better)
Translates to: SEREKYPDSVLP*LPGLRNACSSI
Trigger: GATCGATGAGCAGGCGTTTCTGAGCCCAGGCAGCAAAGGGAGTACTGAGTCTGGGTATTTCTCTCGCTCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp GTCAAGAGCTGTGGGAGCCAAACCCAAGACGGCTTTGGGAGTTTTTaGCAAGTGTCACTGGCTGTGAGTGGACTCGGAGCAGGTCATCAG +
Preference number: 6 (lower is better)
Translates to: VKSCGSQTQDGFGSF*QVSLAVSGLGAGHQ
Trigger: CTGATGACCTGCTCCGAGTCCACTCACAGCCAGTGACACTTGCAAAAAACTCCCAAAGCCGTCTTGGGTTTGGCTCCCACAGCTCTTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp TCTGCACTCTCGGAGCGAGAGAAATACCCAGACTCAGTACTCCCTTaGCTGCCTGGGCTCAGAAACGCCTGCTCATCGATCACCTTCTTC +
Preference number: 6 (lower is better)
Translates to: SALSEREKYPDSVLP*LPGLRNACSSITFF
Trigger: GAAGAAGGTGATCGATGAGCAGGCGTTTCTGAGCCCAGGCAGCAAAGGGAGTACTGAGTCTGGGTATTTCTCTCGCTCCGAGAGTGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 72 bp ACTCTTCGTTTGATTTGTACCCTCCTTCGAAGATTTTaGTCCTCGCCGGCTCCCCTCTCTGGGAGGCAGGAG +
Preference number: 6 (lower is better)
Translates to: TLRLICTLLRRF*SSPAPLSGRQE
Trigger: CTCCTGCCTCCCAGAGAGGGGAGCCGGCGAGGATCAAAATCTTCGAAGGAGGGTACAAATCAAACGAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp AGCGAGAGAAATACCCAGACTCAGTACTCCCTTTGCTaGCTGGGCTCAGAAACGCCTGCTCATCGATCACCT +
Preference number: 6 (lower is better)
Translates to: SERNTQTQYSLC*LGSETPAHRSP
Trigger: AGGTGATCGATGAGCAGGCGTTTCTGAGCCCAGGCAGCAAAGGGAGTACTGAGTCTGGGTATTTCTCTCGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp CTGGGTGACCAAGATCTGGGAAAGGGTGGTGTACATTaGGCTCCCATAGGACGGCATATTGGTCTGAACACG +
Preference number: 6 (lower is better)
Translates to: LGDQDLGKGGVH*APIGRHIGLNT
Trigger: CGTGTTCAGACCAATATGCCGTCCTATGGGAGCGCAATGTACACCACCCTTTCCCAGATCTTGGTCACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp TCTTCACTTAACCCAGAAGGGCCGGGCCCAACCTCATaGACATCTGCACCACATACAGTCGTCCCCTTTGAT +
Preference number: 6 (lower is better)
Translates to: SSLNPEGPGPTS*TSAPHTVVPFD
Trigger: ATCAAAGGGGACGACTGTATGTGGTGCAGATGTGCATGAGGTTGGGCCCGGCCCTTCTGGGTTAAGTGAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp TCACGCTCAGTGGGGTCAACCCTCTTCGGTGAGGTTTaGCAGATGGCTGGGGATATTCCTTCAAAGCTTCTG +
Preference number: 6 (lower is better)
Translates to: SRSVGSTLFGEV*QMAGDIPSKLL
Trigger: CAGAAGCTTTGAAGGAATATCCCCAGCCATCTGGCAAACCTCACCGAAGAGGGTTGACCCCACTGAGCGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp GGTCATCAGGGCCCACGCTATTCTATTGGTGAGGCATaGCCCTCTACTTTGCAGACAGAAAACGCACCAGCA +
Preference number: 6 (lower is better)
Translates to: GHQGPRYSIGEA*PSTLQTENAPA
Trigger: TGCTGGTGCGTTTTCTGTCTGCAAAGTAGAGGGCCATGCCTCACCAATAGAATAGCGTGGGCCCTGATGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp TTGGGAAGTGCCACAGTTGCTGAGCTGCCTTGGGACTaGGTGACCAAGATCTGGGAAAGGGTGGTGTACATT +
Preference number: 6 (lower is better)
Translates to: LGSATVAELPWD*VTKIWERVVYI
Trigger: AATGTACACCACCCTTTCCCAGATCTTGGTCACCCAGTCCCAAGGCAGCTCAGCAACTGTGGCACTTCCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp ATACAGTCGTCCCCTTTGATGGGGGTTCCTCAAACTTaGGAAGTGCCACAGTTGCTGAGCTGCCTTGGGACT +
Preference number: 6 (lower is better)
Translates to: IQSSPLMGVPQT*EVPQLLSCLGT
Trigger: AGTCCCAAGGCAGCTCAGCAACTGTGGCACTTCCCAAGTTTGAGGAACCCCCATCAAAGGGGACGACTGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp TCGGAGGTGCCAAGGAGGGGAGATCAGGTTGTTCCTTaGAATCTTCTTTCTTCACGCTCAGTGGGGTCAACC +
Preference number: 6 (lower is better)
Translates to: SEVPRRGDQVVP*NLLSSRSVGST
Trigger: GGTTGACCCCACTGAGCGTGAAGAAAGAAGATTCCAAGGAACAACCTGATCTCCCCTCCTTGGCACCTCCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp ATGGCACAAGCCTTCCTGCCTCAGGATGCGGAGCTGTaGCCATGGTGTATGTCTCTTTGCTCACTTTCTGCT +
Preference number: 6 (lower is better)
Translates to: MAQAFLPQDAEL*PWCMSLCSLSA
Trigger: AGCAGAAAGTGAGCAAAGAGACATACACCATGGCCACAGCTCCGCATCCTGAGGCAGGAAGGCTTGTGCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CCA 72 bp CGAGGAAAGTGGCTGGAAACGTCTGTTGCTGGACACTaGAAGCCAGATGCTGAAGCAGTTGGAGAGAGGCTA +
Preference number: 6 (lower is better)
Translates to: RGKWLETSVAGH*KPDAEAVGERL
Trigger: TAGCCTCTCTCCAACTGCTTCAGCATCTGGCTTCCAGTGTCCAGCAACAGACGTTTCCAGCCACTTTCCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000460604.1
ENST00000643665.1
CDS CAA 72 bp GACTCGGAGCAGGTCATCAGGGCCCACGCTATTCTATaGGTGAGGCATGGCCCTCTACTTTGCAGACAGAAA +
Preference number: 6 (lower is better)
Translates to: DSEQVIRAHAIL*VRHGPLLCRQK
Trigger: TTTCTGTCTGCAAAGTAGAGGGCCATGCCTCACCAATAGAATAGCGTGGGCCCTGATGACCTGCTCCGAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp TGTGGGAGCCAAACCCAAGACGGCTTTGGGAGTTTTTaGCAAGTGTCACTGGCTGTGAGTGGACTCGGAGCA +
Preference number: 6 (lower is better)
Translates to: CGSQTQDGFGSF*QVSLAVSGLGA
Trigger: TGCTCCGAGTCCACTCACAGCCAGTGACACTTGCAAAAAACTCCCAAAGCCGTCTTGGGTTTGGCTCCCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp GAGGTGGCCGCAGAGGAAATCTGGGACAATGAGCTTTaGGCAGAGGGTTTACTGGATGAGGGCTGTGGTTCT +
Preference number: 6 (lower is better)
Translates to: EVAAEEIWDNEL*AEGLLDEGCGS
Trigger: AGAACCACAGCCCTCATCCAGTAAACCCTCTGCCAAAAGCTCATTGTCCCAGATTTCCTCTGCGGCCACCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp CCTCATGCACATCTGCACCACATACAGTCGTCCCCTTaGATGGGGGTTCCTCAAACTTGGGAAGTGCCACAG +
Preference number: 6 (lower is better)
Translates to: PHAHLHHIQSSP*MGVPQTWEVPQ
Trigger: CTGTGGCACTTCCCAAGTTTGAGGAACCCCCATCAAAGGGGACGACTGTATGTGGTGCAGATGTGCATGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp CTCGGAGGTGCCAAGGAGGGGAGATCAGGTTGTTCCTaGGAATCTTCTTTCTTCACGCTCAGTGGGGTCAAC +
Preference number: 6 (lower is better)
Translates to: LGGAKEGRSGCS*ESSFFTLSGVN
Trigger: GTTGACCCCACTGAGCGTGAAGAAAGAAGATTCCAAGGAACAACCTGATCTCCCCTCCTTGGCACCTCCGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp CAGAGAGCTCGGAGGTGCCAAGGAGGGGAGATCAGGTaGTTCCTTGGAATCTTCTTTCTTCACGCTCAGTGG +
Preference number: 6 (lower is better)
Translates to: QRARRCQGGEIR*FLGIFFLHAQW
Trigger: CCACTGAGCGTGAAGAAAGAAGATTCCAAGGAACAACCTGATCTCCCCTCCTTGGCACCTCCGAGCTCTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp GCTGCATTTATGAATAATCCCAGTGTCCCAAGGAGGTGTCCAGCTTaGGCCACATTGGTCAAGAGCTGTGGGAGCCAAACCCAAGACGGC +
Preference number: 6 (lower is better)
Translates to: AAFMNNPSVPRRCPA*ATLVKSCGSQTQDG
Trigger: GCCGTCTTGGGTTTGGCTCCCACAGCTCTTGACCAATGTGGCCAAAGCTGGACACCTCCTTGGGACACTGGGATTATTCATAAATGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp ACCTTCTTCCTCTCGCTTAAGCGGAGGGCCAGCTTCTaGTTAATCGTGTGGGTGTCTTCAGGTTTATGGCTC +
Preference number: 6 (lower is better)
Translates to: TFFLSLKRRASF*LIVWVSSGLWL
Trigger: GAGCCATAAACCTGAAGACACCCACACGATTAAGCAGAAGCTGGCCCTCCGCTTAAGCGAGAGGAAGAAGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp GGCCTGTCAAGGACAAGCTGCCATAGTCAAAGGATTTaGTGCGTGTCTCGGTCATGTGGGCAGAATGGGAAA +
Preference number: 6 (lower is better)
Translates to: GLSRTSCHSQRI*CVSRSCGQNGK
Trigger: TTTCCCATTCTGCCCACATGACCGAGACACGCAGCAAATCCTTTGACTATGGCAGCTTGTCCTTGACAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp GAATTTCCTTTGTGTCAGATGGATCTGAGGACAGGCTaGACAGCATTTCTAGCTCCCTCCTGCCTTGGCCCT +
Preference number: 6 (lower is better)
Translates to: EFPLCQMDLRTG*TAFLAPSCLGP
Trigger: AGGGCCAAGGCAGGAGGGAGCTAGAAATGCTGTCCAGCCTGTCCTCAGATCCATCTGACACAAAGGAAATTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp ATGAATAATCCCAGTGTCCCAAGGAGGTGTCCAGCTTaGGCCACATTGGTCAAGAGCTGTGGGAGCCAAACC +
Preference number: 6 (lower is better)
Translates to: MNNPSVPRRCPA*ATLVKSCGSQT
Trigger: GGTTTGGCTCCCACAGCTCTTGACCAATGTGGCCAAAGCTGGACACCTCCTTGGGACACTGGGATTATTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp TACTCTTCGTTTGATTTGTACCCTCCTTCGAAGATTTaGATCCTCGCCGGCTCCCCTCTCTGGGAGGCAGGA +
Preference number: 6 (lower is better)
Translates to: YSSFDLYPPSKI*ILAGSPLWEAG
Trigger: TCCTGCCTCCCAGAGAGGGGAGCCGGCGAGGATCAAAATCTTCGAAGGAGGGTACAAATCAAACGAAGAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp CTTCAGAACCTCCTTTCTTCCCATTCTTCAGGACGTTaGTCCCTCGACTGGACAAGATCCAGCAGGAGTGGG +
Preference number: 6 (lower is better)
Translates to: LQNLLSSHSSGR*SLDWTRSSRSG
Trigger: CCCACTCCTGCTGGATCTTGTCCAGTCGAGGGACAAACGTCCTGAAGAATGGGAAGAAAGGAGGTTCTGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS CAA 90 bp GTTTCCATGGTAAGTTCAAGGCTGCCAGCTGGTGAAAGGACACGTTaGCTTCCCCCTGCTGTTGATGAACTCCCCTCCAGGCTCAAGATA +
Preference number: 6 (lower is better)
Translates to: VSMVSSRLPAGERTR*LPPAVDELPSRLKI
Trigger: TATCTTGAGCCTGGAGGGGAGTTCATCAACAGCAGGGGGAAGCAAACGTGTCCTTTCACCAGCTGGCAGCCTTGAACTTACCATGGAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp AATCTGTGCCTTCAGAACCTCCTTTCTTCCCATTCTTCAGGACGTTaGTCCCTCGACTGGACAAGATCCAGCAGGAGTGGGCAACACAGG +
Preference number: 6 (lower is better)
Translates to: NLCLQNLLSSHSSGR*SLDWTRSSRSGQHR
Trigger: CCTGTGTTGCCCACTCCTGCTGGATCTTGTCCAGTCGAGGGACAAACGTCCTGAAGAATGGGAAGAAAGGAGGTTCTGAAGGCACAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS CAA 90 bp CCGCTTCCGGGGACTTCCCTCAGCCTTCTTGGTGCCCTTGACACTTaGTTCAGGATCCATGACCTTCACAAAGACTTCAGATGCTATTCA +
Preference number: 6 (lower is better)
Translates to: PLPGTSLSLLGALDT*FRIHDLHKDFRCYS
Trigger: TGAATAGCATCTGAAGTCTTTGTGAAGGTCATGGATCCTGAACAAAGTGTCAAGGGCACCAAGAAGGCTGAGGGAAGTCCCCGGAAGCGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp AAAGACCTCGCTGTGCTGTCCTCCATTCAGTGGGTTCTGGATGGATaGCCAGATGATGTGAAGGGCTCTTGGTCATGGCTGGTACTTCTA +
Preference number: 6 (lower is better)
Translates to: KDLAVLSSIQWVLDG*PDDVKGSWSWLVLL
Trigger: TAGAAGTACCAGCCATGACCAAGAGCCCTTCACATCATCTGGCAATCCATCCAGAACCCACTGAATGGAGGACAGCACAGCGAGGTCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS TCA 72 bp TCTTTCTTCACGCTCAGTGGGGTCAACCCTCTTCGGTaGGGTTTGCCAGATGGCTGGGGATATTCCTTCAAA +
Preference number: 6 (lower is better)
Translates to: SFFTLSGVNPLR*GLPDGWGYSFK
Trigger: TTTGAAGGAATATCCCCAGCCATCTGGCAAACCTCACCGAAGAGGGTTGACCCCACTGAGCGTGAAGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 72 bp CGAGACACCAGACTGTTTCTCTTCTCAGAGGGGCTCTaGGTCATGAGGAGAACCTCTGGATATGCAGAATGG +
Preference number: 6 (lower is better)
Translates to: RDTRLFLFSEGL*VMRRTSGYAEW
Trigger: CCATTCTGCATATCCAGAGGTTCTCCTCATGACTCAGAGCCCCTCTGAGAAGAGAAACAGTCTGGTGTCTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479350.1
CDS GCA 72 bp TGGAAACCCCCGGAAGGTTGGGGTTGTACAAACTTATaGACCAACCAGCGTAAACAGAGGACCTCCTATCTG +
Preference number: 6 (lower is better)
Translates to: WKPPEGWGCTNL*TNQRKQRTSYL
Trigger: CAGATAGGAGGTCCTCTGTTTACGCTGGTTGGTGCATAAGTTTGTACAACCCCAACCTTCCGGGGGTTTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp AGAGAAATACCCAGACTCAGTACTCCCTTTGCTGCCTaGGCTCAGAAACGCCTGCTCATCGATCACCTTCTT +
Preference number: 6 (lower is better)
Translates to: REIPRLSTPFAA*AQKRLLIDHLL
Trigger: AAGAAGGTGATCGATGAGCAGGCGTTTCTGAGCCCAGGCAGCAAAGGGAGTACTGAGTCTGGGTATTTCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp TCTCATGGTCAAGATGTGTCAGAGATTTCTAGAGCTTaGAGAACTGTGTTGGAGGGAGGCCTTCGGCCTTGG +
Preference number: 6 (lower is better)
Translates to: SHGQDVSEISRA*RTVLEGGLRPW
Trigger: CCAAGGCCGAAGGCCTCCCTCCAACACAGTTCTCCAAGCTCTAGAAATCTCTGACACATCTTGACCATGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS CCA 72 bp AATGAGAAAGACCTCGCTGTGCTGTCCTCCATTCAGTaGGTTCTGGATGGATTGCCAGATGATGTGAAGGGC +
Preference number: 6 (lower is better)
Translates to: NEKDLAVLSSIQ*VLDGLPDDVKG
Trigger: GCCCTTCACATCATCTGGCAATCCATCCAGAACCCACTGAATGGAGGACAGCACAGCGAGGTCTTTCTCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS CAA 72 bp GAAAACGTCATGAAGGATGTCAGTATTGCCATTGTATaGTTTCAGCTGGCAGTGGCAGGTGGCCCCCACGAG +
Preference number: 6 (lower is better)
Translates to: ENVMKDVSIAIV*FQLAVAGGPHE
Trigger: CTCGTGGGGGCCACCTGCCACTGCCAGCTGAAACAATACAATGGCAATACTGACATCCTTCATGACGTTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp TGCAGTACCTTCTTTGAGTCCGTACCTTCTTGTGACTaGGCTGGTCTGGAGGACGTTTCTGACAGAGGCAGA +
Preference number: 6 (lower is better)
Translates to: CSTFFESVPSCD*AGLEDVSDRGR
Trigger: TCTGCCTCTGTCAGAAACGTCCTCCAGACCAGCCAAGTCACAAGAAGGTACGGACTCAAAGAAGGTACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp CAGTGGAGTGAGTTCCAGGGTGGTTCCCAGTTTGTAATGCATCATTaGGGACCACGGCTCATGCTCAATCTGACTCTTTTCAGCTTCTGG +
Preference number: 6 (lower is better)
Translates to: QWSEFQGGSQFVMHH*GPRLMLNLTLFSFW
Trigger: CCAGAAGCTGAAAAGAGTCAGATTGAGCATGAGCCGTGGTCCCAAATGATGCATTACAAACTGGGAACCACCCTGGAACTCACTCCACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp TGCCTTTTCTTTCAGGTAATGTCACAGGCACTCTCAGGTATGGAGTaGGGAAAGCTCTGCTTTGCTCTTCACTTAACCCAGAAGGGCCGG +
Preference number: 6 (lower is better)
Translates to: CLFFQVMSQALSGME*GKLCFALHLTQKGR
Trigger: CCGGCCCTTCTGGGTTAAGTGAAGAGCAAAGCAGAGCTTTCCCAACTCCATACCTGAGAGTGCCTGTGACATTACCTGAAAGAAAAGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp CACGCTATTCTATTGGTGAGGCATGGCCCTCTACTTTaGAGACAGAAAACGCACCAGCACTTTCTGCCTGAA +
Preference number: 6 (lower is better)
Translates to: HAILLVRHGPLL*RQKTHQHFLPE
Trigger: TTCAGGCAGAAAGTGCTGGTGCGTTTTCTGTCTGCAAAGTAGAGGGCCATGCCTCACCAATAGAATAGCGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp CAACTGACATTAGTGGTTGTGTGGAGGCTGGGGAACTaGAGTACCTTCTTTGAGTCCGTACCTTCTTGTGAC +
Preference number: 6 (lower is better)
Translates to: QLTLVVVWRLGN*STFFESVPSCD
Trigger: GTCACAAGAAGGTACGGACTCAAAGAAGGTACTGCAGTTCCCCAGCCTCCACACAACCACTAATGTCAGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp TTTCAGCTTCTGGAGATGTGTGGGTGCCTGCAGAGATaGGCTTTGCGATCTGAAGCTCTGAGCAGTAGTATT +
Preference number: 6 (lower is better)
Translates to: FQLLEMCGCLQR*ALRSEALSSSI
Trigger: AATACTACTGCTCAGAGCTTCAGATCGCAAAGCCCATCTCTGCAGGCACCCACACATCTCCAGAAGCTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp AAATCTGGGACAATGAGCTTTTGGCAGAGGGTTTACTaGATGAGGGCTGTGGTTCTTCGCTCTCCTGTCTTC +
Preference number: 6 (lower is better)
Translates to: KSGTMSFWQRVY*MRAVVLRSPVF
Trigger: GAAGACAGGAGAGCGAAGAACCACAGCCCTCATCCAGTAAACCCTCTGCCAAAAGCTCATTGTCCCAGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 72 bp GGGACTTCCCTCAGCCTTCTTGGTGCCCTTGACACTTaGTTCAGGATCCATGACCTTCACAAAGACTTCAGA +
Preference number: 6 (lower is better)
Translates to: GTSLSLLGALDT*FRIHDLHKDFR
Trigger: TCTGAAGTCTTTGTGAAGGTCATGGATCCTGAACAAAGTGTCAAGGGCACCAAGAAGGCTGAGGGAAGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CCA 72 bp TGGGTTTGTGCCTCGAATCCTGCCAAAAACCAGCCGTaGTCTCATGGTCAAGATGTGTCAGAGATTTCTAGA +
Preference number: 6 (lower is better)
Translates to: WVCASNPAKNQP*SHGQDVSEISR
Trigger: TCTAGAAATCTCTGACACATCTTGACCATGAGACCACGGCTGGTTTTTGGCAGGATTCGAGGCACAAACCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS CCA 72 bp TTTCCCTTCAAGCACCAGTGTCCTCAACCTCTGGCATaGTATTGGAATCTGTGCCTTCAGAACCTCCTTTCT +
Preference number: 6 (lower is better)
Translates to: FPFKHQCPQPLA*YWNLCLQNLLS
Trigger: AGAAAGGAGGTTCTGAAGGCACAGATTCCAATACCATGCCAGAGGTTGAGGACACTGGTGCTTGAAGGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS CCA 72 bp AAGGTGGATATGAGATGGCCAAAGTCCCATGAGGAATaGCCTCCAGGTATGATGATGAAATCCAGTGCAGGA +
Preference number: 6 (lower is better)
Translates to: KVDMRWPKSHEE*PPGMMMKSSAG
Trigger: TCCTGCACTGGATTTCATCATCATACCTGGAGGCCATTCCTCATGGGACTTTGGCCATCTCATATCCACCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS CAA 72 bp GAGTTCCAGGGTGGTTCCCAGTTTGTAATGCATCATTaGGGACCACGGCTCATGCTCAATCTGACTCTTTTC +
Preference number: 6 (lower is better)
Translates to: EFQGGSQFVMHH*GPRLMLNLTLF
Trigger: GAAAAGAGTCAGATTGAGCATGAGCCGTGGTCCCAAATGATGCATTACAAACTGGGAACCACCCTGGAACTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS CAA 90 bp GGACTTGTACTGCTTCTTTGGCTTCTCTGGCTCTTGTTCCAGCTTTaGCAGTTACAAAATGAGAAAGACCTCGCTGTGCTGTCCTCCATT +
Preference number: 6 (lower is better)
Translates to: GLVLLLWLLWLLFQL*QLQNEKDLAVLSSI
Trigger: AATGGAGGACAGCACAGCGAGGTCTTTCTCATTTTGTAACTGCAAAAGCTGGAACAAGAGCCAGAGAAGCCAAAGAAGCAGTACAAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS TCA 72 bp TTCTGTGCTGAAGGCACCACTTCCGATGACCAAAACTaGAACGCTGTTCTCTCTGAAAGCCAGCATTCATGT +
Preference number: 6 (lower is better)
Translates to: FCAEGTTSDDQN*NAVLSESQHSC
Trigger: ACATGAATGCTGGCTTTCAGAGAGAACAGCGTTTCAGTTTTGGTCATCGGAAGTGGTGCCTTCAGCACAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS TCA 72 bp GAATGGATAAACTGCTTCTTTAAAGAAGGGCGTCTCTaGGTGCTGGGTCCTCCACTGGAAATAATGTGGGGA +
Preference number: 6 (lower is better)
Translates to: EWINCFFKEGRL*VLGPPLEIMWG
Trigger: TCCCCACATTATTTCCAGTGGAGGACCCAGCACTCAGAGACGCCCTTCTTTAAAGAAGCAGTTTATCCATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479350.1
CDS GCA 72 bp CTCTACTTTGCAGACAGAAAACGCACCAGCACTTTCTaGCTGAATGTCTGTCGGGAAAACGTCATGAAGGAT +
Preference number: 6 (lower is better)
Translates to: LYFADRKRTSTF*LNVCRENVMKD
Trigger: ATCCTTCATGACGTTTTCCCGACAGACATTCAGGCAGAAAGTGCTGGTGCGTTTTCTGTCTGCAAAGTAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp TTGTTCAGGATCCATGACCTTCACAAAGACTTCAGATaGTATTCAGGGAGAGTCAGGGCGGGCTGCATTTAT +
Preference number: 6 (lower is better)
Translates to: LFRIHDLHKDFR*YSGRVRAGCIY
Trigger: ATAAATGCAGCCCGCCCTGACTCTCCCTGAATAGCATCTGAAGTCTTTGTGAAGGTCATGGATCCTGAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000372583.6
ENST00000372584.5
ENST00000643665.1
CDS GCA 72 bp AGCTTTTGCAGTTACAAAATGAGAAAGACCTCGCTGTaGTGTCCTCCATTCAGTGGGTTCTGGATGGATTGC +
Preference number: 6 (lower is better)
Translates to: SFCSYKMRKTSL*CPPFSGFWMDC
Trigger: GCAATCCATCCAGAACCCACTGAATGGAGGACAGCACAGCGAGGTCTTTCTCATTTTGTAACTGCAAAAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS TCA 72 bp ACCCAAACAGAAGCATCCCTCTTGAATTCGTGCTGCTaGAAAACACGGAATAAATTCAGCCTGCAGACACAG +
Preference number: 6 (lower is better)
Translates to: TQTEASLLNSCC*KTRNKFSLQTQ
Trigger: CTGTGTCTGCAGGCTGAATTTATTCCGTGTTTTTCAGCAGCACGAATTCAAGAGGGATGCTTCTGTTTGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS CCA 72 bp GAAATGGGAATAACATGCTTAAAGGTGGATATGAGATaGCCAAAGTCCCATGAGGAATGGCCTCCAGGTATG +
Preference number: 6 (lower is better)
Translates to: EMGITCLKVDMR*PKSHEEWPPGM
Trigger: CATACCTGGAGGCCATTCCTCATGGGACTTTGGCCATCTCATATCCACCTTTAAGCATGTTATTCCCATTTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5
CDS TCA 72 bp TATACACACATATGCACACGGAATAGCCATGTACATTaGAGCACCAAACTAGGCAGCTGGATAATGGGAGAG +
Preference number: 6 (lower is better)
Translates to: YTHICTRNSHVH*STKLGSWIMGE
Trigger: CTCTCCCATTATCCAGCTGCCTAGTTTGGTGCTTCAATGTACATGGCTATTCCGTGTGCATATGTGTGTATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000372583.6
ENST00000372584.5
CDS TCA 72 bp TCGCGCCGGGAACAGATCCACCCTCTGTTATTCCTCTaGATAAATATAAATCACGATCAGAAACCCAAACAG +
Preference number: 6 (lower is better)
Translates to: SRREQIHPLLFL*ININHDQKPKQ
Trigger: CTGTTTGGGTTTCTGATCGTGATTTATATTTATTCAGAGGAATAACAGAGGGTGGATCTGTTCCCGGCGCGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372583.6
CDS TCA 72 bp TTTCTCCTAGGGAAGGATACCCAGAGCTACCACAGCTaGAATGGGAATAACATGCTTAAAGGTGGATATGAG +
Preference number: 6 (lower is better)
Translates to: FLLGKDTQSYHS*NGNNMLKGGYE
Trigger: CTCATATCCACCTTTAAGCATGTTATTCCCATTTCAGCTGTGGTAGCTCTGGGTATCCTTCCCTAGGAGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000479350.1
ENST00000489103.5
ENST00000491442.5