RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HIVEP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000095951

Ensembl transcript IDs: ENST00000379388.7, ENST00000399469.2, ENST00000442081.6, ENST00000484210.1, ENST00000487103.5, ENST00000541134.5, ENST00000627968.2

Found 957 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATCACAAGCCTGTCCTCGTCATCATCGCTGCTCACGTCGCTGAAGTaGACAGTGGGCTGCCTCCGCGGTAGTGCTGTGGGCCTGGGAACC +
Preference number: 1 (lower is better)
Translates to: ITSLSSSSSLLTSLK*TVGCLRGSAVGLGT
Trigger: GGTTCCCAGGCCCACAGCACTACCGCGGAGGCAGCCCACTGTGCACTTCAGCGACGTGAGCAGCGATGATGACGAGGACAGGCTTGTGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 90 bp TTGCTATCACAAGCCTGTCCTCGTCATCATCGCTGCTCACGTCGCTaGAGTGCACAGTGGGCTGCCTCCGCGGTAGTGCTGTGGGCCTGG +
Preference number: 1 (lower is better)
Translates to: LLSQACPRHHRCSRR*SAQWAASAVVLWAW
Trigger: CCAGGCCCACAGCACTACCGCGGAGGCAGCCCACTGTGCACTTCAGCGACGTGAGCAGCGATGATGACGAGGACAGGCTTGTGATAGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CCA 90 bp GGGTCAGGATGTGGTGAGGCCACAGAAGGCATCCCCGCTGCTGTCTaGGGGCTGTGCTCAGCTGCAGCAGGAGGAAGTCTTACAGATGAT +
Preference number: 1 (lower is better)
Translates to: GSGCGEATEGIPAAV*GLCSAAAGGSLTDD
Trigger: ATCATCTGTAAGACTTCCTCCTGCTGCAGCTGAGCACAGCCCCCAGACAGCAGCGGGGATGCCTTCTGTGGCCTCACCACATCCTGACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 90 bp TCCTATTGTAGTCAGACTGTGCTGTGCTCAGGACAGTCATTCTGGTaGGCAGCGCCCTGGGCAGAACGTCCATTGGGTCCGTGTGTACCC +
Preference number: 1 (lower is better)
Translates to: SYCSQTVLCSGQSFW*AAPWAERPLGPCVP
Trigger: GGGTACACACGGACCCAATGGACGTTCTGCCCAGGGCGCTGCTCACCAGAATGACTGTCCTGAGCACAGCACAGTCTGACTACAATAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 90 bp TCAGCAGAGGTTGTGACGTGGACGCTGGTTGGCCCTGTATGGAAGTaGGTTCAGGCTTGGGCTTCACGTGATTTGCCGAGGCAGCCTTCT +
Preference number: 1 (lower is better)
Translates to: SAEVVTWTLVGPVWK*VQAWASRDLPRQPS
Trigger: AGAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTCACTTCCATACAGGGCCAACCAGCGTCCACGTCACAACCTCTGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CCA 90 bp CAAAGTTCTGTGAACGACACTGACAGCAGGGATCGTGAGCTGCACTaGTCCAGCCTGAAGGGGCACAAACGTGGAGTATGTGAGGCCAGC +
Preference number: 1 (lower is better)
Translates to: QSSVNDTDSRDRELH*SSLKGHKRGVCEAS
Trigger: GCTGGCCTCACATACTCCACGTTTGTGCCCCTTCAGGCTGGACCAGTGCAGCTCACGATCCCTGCTGTCAGTGTCGTTCACAGAACTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR GCA 90 bp GGAGACTCGGTCCTGCTGACCTGGTTTGCGCTGGCTACAGAAGTCTaGTTGGGTTGTGTCTCGCATGCTTTGCTTTGGGAAGCTGGCATT +
Preference number: 1 (lower is better)
Translates to: GDSVLLTWFALATEV*LGCVSHALLWEAGI
Trigger: AATGCCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAAACCAGGTCAGCAGGACCGAGTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 90 bp ATGCTTAACGAGGGGAGTGACTGCAAGCCTGGGGTACTTAGGTTCTaGAGGCCTGGCACGCGGATTTGGCCGATAGGAATACATGGCACA +
Preference number: 1 (lower is better)
Translates to: MLNEGSDCKPGVLRF*RPGTRIWPIGIHGT
Trigger: TGTGCCATGTATTCCTATCGGCCAAATCCGCGTGCCAGGCCTTCAGAACCTAAGTACCCCAGGCTTGCAGTCACTCCCCTCGTTAAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 90 bp GCTGGTTGGCCCTGTATGGAAGTGAGTTCAGGCTTGGGCTTCACGTaGTTTGCCGAGGCAGCCTTCTCTGTGTCCATTTTACTCAGGCCA +
Preference number: 1 (lower is better)
Translates to: AGWPCMEVSSGLGFT*FAEAAFSVSILLRP
Trigger: TGGCCTGAGTAAAATGGACACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTCACTTCCATACAGGGCCAACCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR GCA 90 bp TTGCGCTGGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTaGTTTGGGAAGCTGGCATTTCTGGAGCTCCCTGTGCATCAACGG +
Preference number: 1 (lower is better)
Translates to: LRWLQKSAWVVSRML*FGKLAFLELPVHQR
Trigger: CCGTTGATGCACAGGGAGCTCCAGAAATGCCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR GCA 90 bp CTGGTTTGCGCTGGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATaGTTTGCTTTGGGAAGCTGGCATTTCTGGAGCTCCCTGTGCATC +
Preference number: 1 (lower is better)
Translates to: LVCAGYRSLLGLCLA*FALGSWHFWSSLCI
Trigger: GATGCACAGGGAGCTCCAGAAATGCCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAAACCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 90 bp AAGCAATCGGTGATCCTGACATCCTCGTCAGTACTCACAGGGTCCTaGAGGCTACTTCTAGATGGAAGGTGCTGCGGGCTAGCTGTGACT +
Preference number: 1 (lower is better)
Translates to: KQSVILTSSSVLTGS*RLLLDGRCCGLAVT
Trigger: AGTCACAGCTAGCCCGCAGCACCTTCCATCTAGAAGTAGCCTTCAGGACCCTGTGAGTACTGACGAGGATGTCAGGATCACCGATTGCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 90 bp TGTGGGCCTGGGAACCTGTCTGTCTGGAGAGAGAGTCTGCTGGCCTaGGGGCTTTGTAAAAACTTCAGAATGTGCCTTCAGCAGAGGTTG +
Preference number: 1 (lower is better)
Translates to: CGPGNLSVWRESLLA*GLCKNFRMCLQQRL
Trigger: CAACCTCTGCTGAAGGCACATTCTGAAGTTTTTACAAAGCCCTCAGGCCAGCAGACTCTCTCTCCAGACAGACAGGTTCCCAGGCCCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CCA 90 bp CTACAGACGGAATTGTGTCGTTTTCATCTCTCGCAGCACGCTGCCTaGCCTTCCCCGGAGAGAGTGTCTTCCTATTGTAGTCAGACTGTG +
Preference number: 1 (lower is better)
Translates to: LQTELCRFHLSQHAA*PSPERVSSYCSQTV
Trigger: CACAGTCTGACTACAATAGGAAGACACTCTCTCCGGGGAAGGCCAGGCAGCGTGCTGCGAGAGATGAAAACGACACAATTCCGTCTGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CCA 90 bp CTGGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTGCTTTaGGAAGCTGGCATTTCTGGAGCTCCCTGTGCATCAACGGCTACT +
Preference number: 1 (lower is better)
Translates to: LATEVCLGCVSHALL*EAGISGAPCASTAT
Trigger: AGTAGCCGTTGATGCACAGGGAGCTCCAGAAATGCCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR GCA 90 bp TTGGCCCTGTATGGAAGTGAGTTCAGGCTTGGGCTTCACGTGATTTaGCGAGGCAGCCTTCTCTGTGTCCATTTTACTCAGGCCATCAAG +
Preference number: 1 (lower is better)
Translates to: LALYGSEFRLGLHVI*RGSLLCVHFTQAIK
Trigger: CTTGATGGCCTGAGTAAAATGGACACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTCACTTCCATACAGGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CCA 90 bp AGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTGCTTTGGGAAGCTaGCATTTCTGGAGCTCCCTGTGCATCAACGGCTACTTGACTGAC +
Preference number: 1 (lower is better)
Translates to: RSLLGLCLACFALGS*HFWSSLCINGYLTD
Trigger: GTCAGTCAAGTAGCCGTTGATGCACAGGGAGCTCCAGAAATGCCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCCAAGCAGACTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 90 bp GATGGACTTGTGGGGCCATATTTGTATTGGCTAGGCCTACAATATTaGCGGTTTCCATGCTTAACGAGGGGAGTGACTGCAAGCCTGGGG +
Preference number: 1 (lower is better)
Translates to: DGLVGPYLYWLGLQY*RFPCLTRGVTASLG
Trigger: CCCCAGGCTTGCAGTCACTCCCCTCGTTAAGCATGGAAACCGTCAATATTGTAGGCCTAGCCAATACAAATATGGCCCCACAAGTCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 90 bp TGGGAAGCTGGCATTTCTGGAGCTCCCTGTGCATCAACGGCTACTTaGCTGACTGAGGGGATTAAGGTGGGCAATGCTATGTTCAAGATC +
Preference number: 1 (lower is better)
Translates to: WEAGISGAPCASTAT*LTEGIKVGNAMFKI
Trigger: GATCTTGAACATAGCATTGCCCACCTTAATCCCCTCAGTCAGTCAAGTAGCCGTTGATGCACAGGGAGCTCCAGAAATGCCAGCTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CCA 90 bp GTCAGAACCTGCAGTCCGACAGCATTCAGAGCCAGTCCTGGTGGATaGACTTGTGGGGCCATATTTGTATTGGCTAGGCCTACAATATTG +
Preference number: 1 (lower is better)
Translates to: VRTCSPTAFRASPGG*TCGAIFVLARPTIL
Trigger: CAATATTGTAGGCCTAGCCAATACAAATATGGCCCCACAAGTCCATCCACCAGGACTGGCTCTGAATGCTGTCGGACTGCAGGTTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 90 bp TATAGCAACAGCTTTTCCTGCCATAGAACTTCTCAGAATTTCTTCTaGCTCAGGGTAGTCCACAGACATCTGATGACACGGGGACCTGGA +
Preference number: 1 (lower is better)
Translates to: YSNSFSCHRTSQNFF*LRVVHRHLMTRGPG
Trigger: TCCAGGTCCCCGTGTCATCAGATGTCTGTGGACTACCCTGAGTCAGAAGAAATTCTGAGAAGTTCTATGGCAGGAAAAGCTGTTGCTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CCA 90 bp GGGGAATGGAGAATGATTCTTTGTTGTTGTTGTTGGTGGTGGTGGTaGTGGTTCTTTGTTGTTGTTGTTGTTGGTTCTTTGTTGTTGTTG +
Preference number: 1 (lower is better)
Translates to: GEWRMILCCCCWWWW*WFFVVVVVGSLLLL
Trigger: CAACAACAACAAAGAACCAACAACAACAACAACAAAGAACCACCACCACCACCACCAACAACAACAACAAAGAATCATTCTCCATTCCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484210.1
3UTR CCA 90 bp TTTGGGGAATGGAGAATGATTCTTTGTTGTTGTTGTTGGTGGTGGTaGTGGTGGTTCTTTGTTGTTGTTGTTGTTGGTTCTTTGTTGTTG +
Preference number: 1 (lower is better)
Translates to: FGEWRMILCCCCWWW*WWFFVVVVVGSLLL
Trigger: CAACAACAAAGAACCAACAACAACAACAACAAAGAACCACCACCACCACCACCAACAACAACAACAAAGAATCATTCTCCATTCCCCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484210.1
3UTR CCA 90 bp GAATGGAGAATGATTCTTTGTTGTTGTTGTTGGTGGTGGTGGTGGTaGTTCTTTGTTGTTGTTGTTGTTGGTTCTTTGTTGTTGTTGTTG +
Preference number: 1 (lower is better)
Translates to: EWRMILCCCCWWWWW*FFVVVVVGSLLLLL
Trigger: CAACAACAACAACAAAGAACCAACAACAACAACAACAAAGAACCACCACCACCACCACCAACAACAACAACAAAGAATCATTCTCCATTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484210.1
3UTR CAA 90 bp CTGGAATGTGTGCCTGAGGGGCGGGGCTGCTTTGTGATGAAGGGTTaGCAGTCAGAACCTGCAGTCCGACAGCATTCAGAGCCAGTCCTG +
Preference number: 2 (lower is better)
Translates to: LECVPEGRGCFVMKG*QSEPAVRQHSEPVL
Trigger: CAGGACTGGCTCTGAATGCTGTCGGACTGCAGGTTCTGACTGCAAACCCTTCATCACAAAGCAGCCCCGCCCCTCAGGCACACATTCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR TCA 90 bp GAGTTCAGGCTTGGGCTTCACGTGATTTGCCGAGGCAGCCTTCTCTGTGTCCATGGACAGTCATTCTGGTaGGCAGCGCCCTGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: EFRLGLHVICRGSLLCVHGQSFW*AAPWAE
Trigger: TTCTGCCCAGGGCGCTGCTCACCAGAATGACTGTCC...ATGGACACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR TCA 90 bp GGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTGCTTTGGGAAGCTGGGGGGTACTTAGGTTCTaGAGGCCTGGCACGCGGATT +
Preference number: 2 (lower is better)
Translates to: GYRSLLGLCLACFALGSWGVLRF*RPGTRI
Trigger: AATCCGCGTGCCAGGCCTTCAGAACCTAAGTACCCC...CCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR GCA 90 bp CTGACCTGGTTTGCGCTGGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTAACGAGGGGAGTGACTaGAAGCCTGGGGTACTTAGG +
Preference number: 2 (lower is better)
Translates to: LTWFALATEVCLGCVSHANEGSD*KPGVLR
Trigger: CCTAAGTACCCCAGGCTTGCAGTCACTCCCCTCGTT...AGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAAACCAGGTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR GCA 90 bp TCAGAATGTGCCTTCAGCAGAGGTTGTGACGTGGACGCTGGTTGGCCCTGTATGCCTGCTGACCTGGTTTaGGCTGGCTACAGAAGTCTG +
Preference number: 2 (lower is better)
Translates to: SECAFSRGCDVDAGWPCMPADLV*AGYRSL
Trigger: CAGACTTCTGTAGCCAGCGCAAACCAGGTCAGCAGG...CATACAGGGCCAACCAGCGTCCACGTCACAACCTCTGCTGAAGGCACATTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR CCA 90 bp GGGTTTGCAGTCAGAACCTGCAGTCCGACAGCATTCAGAGCCAGTCCTGGTGGAGTCCTCGATTGCTGCTaGGAATGCAAAGGAAGGTGG +
Preference number: 2 (lower is better)
Translates to: GFAVRTCSPTAFRASPGGVLDCC*ECKGRW
Trigger: CCACCTTCCTTTGCATTCCCAGCAGCAATCGAGGAC...TCCACCAGGACTGGCTCTGAATGCTGTCGGACTGCAGGTTCTGACTGCAAACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR CCA 90 bp TCAGAATGTGCCTTCAGCAGAGGTTGTGACGTGGACGCTGGTTGGCCCTGTATGCAAGATCTGGAGACCTaGAATGTGTGCCTGAGGGGC +
Preference number: 2 (lower is better)
Translates to: SECAFSRGCDVDAGWPCMQDLET*NVCLRG
Trigger: GCCCCTCAGGCACACATTCCAGGTCTCCAGATCTTG...CATACAGGGCCAACCAGCGTCCACGTCACAACCTCTGCTGAAGGCACATTCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR TCA 90 bp GAGTTCAGGCTTGGGCTTCACGTGATTTGCCGAGGCAGCCTTCTCTGTGTCCATCAAACGTGGAGTATGTaGGGCCAGCAGGTACCACAT +
Preference number: 2 (lower is better)
Translates to: EFRLGLHVICRGSLLCVHQTWSM*GQQVPH
Trigger: ATGTGGTACCTGCTGGCCTCACATACTCCACGTTTG...ATGGACACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR GCA 90 bp CGCCCTGGGCAGAACGTCCATTGGGTCCGTGTGTACCCCAGAAAAGCAATCGGTAGAAGTTACAGTAAGTaGAGTGGTAGGGGCGGACAT +
Preference number: 2 (lower is better)
Translates to: RPGQNVHWVRVYPRKAIGRSYSK*SGRGGH
Trigger: ATGTCCGCCCCTACCACTGCACTTACTGTAACTTCT...ACCGATTGCTTTTCTGGGGTACACACGGACCCAATGGACGTTCTGCCCAGGGCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR GCA 90 bp GGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTGCTTTGGGAAGCTGGCTAGATGGAAGGTGCTaGGGGCTAGCTGTGACTGAG +
Preference number: 2 (lower is better)
Translates to: GYRSLLGLCLACFALGSWLDGRC*GLAVTE
Trigger: CTCAGTCACAGCTAGCCCGCAGCACCTTCCATCTAG...CCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CAA 90 bp TTTGCGCTGGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTaGCTTTGGGAAGCTGGCATTTCTGGAGCTCCCTGTGCATCAACG +
Preference number: 2 (lower is better)
Translates to: FALATEVCLGCVSHA*LWEAGISGAPCAST
Trigger: CGTTGATGCACAGGGAGCTCCAGAAATGCCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR GCA 90 bp GAGTTCAGGCTTGGGCTTCACGTGATTTGCCGAGGCAGCCTTCTCTGTGTCCATCTGGCTACAGAAGTCTaGTTGGGTTGTGTCTCGCAT +
Preference number: 2 (lower is better)
Translates to: EFRLGLHVICRGSLLCVHLATEV*LGCVSH
Trigger: ATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAG...ATGGACACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR CCA 90 bp GTGTCTACAGACGGAATTGTGTCGTTTTCATCTCTCGCAGCACGCTGCCTGGCCAGGACTGATTCAGCCTaGCTGTCCTCATCATCGTCT +
Preference number: 2 (lower is better)
Translates to: VSTDGIVSFSSLAARCLARTDSA*LSSSSS
Trigger: AGACGATGATGAGGACAGCCAGGCTGAATCAGTCCT...GGCCAGGCAGCGTGCTGCGAGAGATGAAAACGACACAATTCCGTCTGTAGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR CCA 90 bp GACCTGGTTTGCGCTGGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTAAGGCTACTTCTAGATaGAAGGTGCTGCGGGCTAGC +
Preference number: 2 (lower is better)
Translates to: DLVCAGYRSLLGLCLACFKATSR*KVLRAS
Trigger: GCTAGCCCGCAGCACCTTCCATCTAGAAGTAGCCTT...AAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAAACCAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR CCA 90 bp CATTCAGAGCCAGTCCTGGTGGATGGACTTGTGGGGCCATATTTGTATTGGCTAGGGCAGAACGTCCATTaGGTCCGTGTGTACCCCAGA +
Preference number: 2 (lower is better)
Translates to: HSEPVLVDGLVGPYLYWLGQNVH*VRVYPR
Trigger: TCTGGGGTACACACGGACCCAATGGACGTTCTGCCC...TAGCCAATACAAATATGGCCCCACAAGTCCATCCACCAGGACTGGCTCTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR CCA 90 bp GACCTGGTTTGCGCTGGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTGATGACACGGGGACCTaGAAGTGTCTACAGACGGAA +
Preference number: 2 (lower is better)
Translates to: DLVCAGYRSLLGLCLACFDDTGT*KCLQTE
Trigger: TTCCGTCTGTAGACACTTCCAGGTCCCCGTGTCATC...AAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAAACCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR GCA 90 bp CCTATGAGTACCCAAAGTTCTGTGAACGACACTGACAGCAGGGATCGTGAGCTGCTTCTAGATGGAAGGTaGTGCGGGCTAGCTGTGACT +
Preference number: 2 (lower is better)
Translates to: PMSTQSSVNDTDSRDRELLLDGR*CGLAVT
Trigger: AGTCACAGCTAGCCCGCAGCACCTTCCATCTAGAAG...CAGCTCACGATCCCTGCTGTCAGTGTCGTTCACAGAACTTTGGGTACTCATAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CAA 90 bp GGATGGACTTGTGGGGCCATATTTGTATTGGCTAGGCCTACAATATaGACGGTTTCCATGCTTAACGAGGGGAGTGACTGCAAGCCTGGG +
Preference number: 2 (lower is better)
Translates to: GWTCGAIFVLARPTI*TVSMLNEGSDCKPG
Trigger: CCCAGGCTTGCAGTCACTCCCCTCGTTAAGCATGGAAACCGTCAATATTGTAGGCCTAGCCAATACAAATATGGCCCCACAAGTCCATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR TCA 90 bp CTGACCTGGTTTGCGCTGGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTCTCAGAATTTCTTCTaGCTCAGGGTAGTCCACAGA +
Preference number: 2 (lower is better)
Translates to: LTWFALATEVCLGCVSHASQNFF*LRVVHR
Trigger: TCTGTGGACTACCCTGAGTCAGAAGAAATTCTGAGA...AGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAAACCAGGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR TCA 90 bp GAGTTCAGGCTTGGGCTTCACGTGATTTGCCGAGGCAGCCTTCTCTGTGTCCATAGGAAGTCTTACAGATaGTGGGCTCTGTGTTATAGC +
Preference number: 2 (lower is better)
Translates to: EFRLGLHVICRGSLLCVHRKSYR*WALCYS
Trigger: GCTATAACACAGAGCCCATCATCTGTAAGACTTCCT...ATGGACACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR CCA 90 bp TCAGAATGTGCCTTCAGCAGAGGTTGTGACGTGGACGCTGGTTGGCCCTGTATGCTGAGGGGATTAAGGTaGGCAATGCTATGTTCAAGA +
Preference number: 2 (lower is better)
Translates to: SECAFSRGCDVDAGWPCMLRGLR*AMLCSR
Trigger: TCTTGAACATAGCATTGCCCACCTTAATCCCCTCAG...CATACAGGGCCAACCAGCGTCCACGTCACAACCTCTGCTGAAGGCACATTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CAA 90 bp TTCAGAGCCAGTCCTGGTGGATGGACTTGTGGGGCCATATTTGTATaGGCTAGGCCTACAATATTGACGGTTTCCATGCTTAACGAGGGG +
Preference number: 2 (lower is better)
Translates to: FRASPGGWTCGAIFV*ARPTILTVSMLNEG
Trigger: CCCCTCGTTAAGCATGGAAACCGTCAATATTGTAGGCCTAGCCAATACAAATATGGCCCCACAAGTCCATCCACCAGGACTGGCTCTGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR CCA 90 bp GTCTACAGACGGAATTGTGTCGTTTTCATCTCTCGCAGCACGCTGCCTGGCCTTATTGTCATCCTCATCTaGGCCATCAGATTCTTCAAG +
Preference number: 2 (lower is better)
Translates to: VYRRNCVVFISRSTLPGLIVILI*AIRFFK
Trigger: CTTGAAGAATCTGATGGCCCAGATGAGGATGACAAT...AAGGCCAGGCAGCGTGCTGCGAGAGATGAAAACGACACAATTCCGTCTGTAGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR TCA 90 bp AACATTCATTCTATGTGCCTGTTACTCTGCCAGGTATATTATATAAAGTGTCCAGTCTGGGCAACAAAGTaGGGAACTCCCCTCCCCTCC +
Preference number: 2 (lower is better)
Translates to: NIHSMCLLLCQVYYIKCPVWATK*GTPLPS
Trigger: GGAGGGGAGGGGAGTTCCTCACTTTGTTGCCCAGAC...TGGACACTTTATATAATATACCTGGCAGAGTAACAGGCACATAGAATGAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484210.1
3UTR-3UTR GCA 90 bp TTCATCTTTAGTCTTAAAGGAGAAGTTACAGTAAGTGCAGTGGTAGGGGCGGACATTTTCCTCTTCCCCTaGCTCGGACATATACATACT +
Preference number: 2 (lower is better)
Translates to: FIFSLKGEVTVSAVVGADIFLFP*LGHIHT
Trigger: AGTATGTATATGTCCGAGGCAGGGGAAGAGGAAAAT...GTCCGCCCCTACCACTGCACTTACTGTAACTTCTCCTTTAAGACTAAAGATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR GCA 90 bp AACATTCATTCTATGTGCCTGTTACTCTGCCAGGTATATTATATAAAGTGTCCACTTGACCTCGTGATCTaGCTGCCTCAGCCTCCCAAA +
Preference number: 2 (lower is better)
Translates to: NIHSMCLLLCQVYYIKCPLDLVI*LPQPPK
Trigger: TTTGGGAGGCTGAGGCAGGCAGATCACGAGGTCAAG...TGGACACTTTATATAATATACCTGGCAGAGTAACAGGCACATAGAATGAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484210.1
3UTR-3UTR CCA 90 bp AACATTCATTCTATGTGCCTGTTACTCTGCCAGGTATATTATATAAAGTGTCCATTGTCGTTGTTGAGATaGAGTCTCGCCCTGTCGCCC +
Preference number: 2 (lower is better)
Translates to: NIHSMCLLLCQVYYIKCPLSLLR*SLALSP
Trigger: GGGCGACAGGGCGAGACTCCATCTCAACAACGACAA...TGGACACTTTATATAATATACCTGGCAGAGTAACAGGCACATAGAATGAATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484210.1
3UTR-3UTR TCA 90 bp ATTTGGCCGATAGGAATACATGGCACAACACTGCTTAATTCAGCCACTCCAGCACAGATCGCTCATAACTaGATCTCTGTTTTTCATCTT +
Preference number: 2 (lower is better)
Translates to: IWPIGIHGTTLLNSATPAQIAHN*ISVFHL
Trigger: AAGATGAAAAACAGAGATTCAGTTATGAGCGATCTG...TGCTGGAGTGGCTGAATTAAGCAGTGTTGTGCCATGTATTCCTATCGGCCAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR CCA 90 bp AACATTCATTCTATGTGCCTGTTACTCTGCCAGGTATATTATATAAAGTGTCCAGTAATCTCAGTGCTTTaGGGGGCCAACACAGGAGGT +
Preference number: 2 (lower is better)
Translates to: NIHSMCLLLCQVYYIKCPVISVL*GANTGG
Trigger: ACCTCCTGTGTTGGCCCCCCAAAGCACTGAGATTAC...TGGACACTTTATATAATATACCTGGCAGAGTAACAGGCACATAGAATGAATGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484210.1
3UTR-3UTR CCA 90 bp AACATTCATTCTATGTGCCTGTTACTCTGCCAGGTATATTATATAAAGTGTCCAGGGGTTTCGGCATGTTaGCCAGGATGGTCTCAATCT +
Preference number: 2 (lower is better)
Translates to: NIHSMCLLLCQVYYIKCPGVSAC*PGWSQS
Trigger: AGATTGAGACCATCCTGGCCAACATGCCGAAACCCC...TGGACACTTTATATAATATACCTGGCAGAGTAACAGGCACATAGAATGAATGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484210.1
3UTR-3UTR CCA 90 bp AACATTCATTCTATGTGCCTGTTACTCTGCCAGGTATATTATATAAAGTGTCCAGCAACCTCCGCCTCCTaGCTTCAAGCAATTATCCTG +
Preference number: 2 (lower is better)
Translates to: NIHSMCLLLCQVYYIKCPATSAS*LQAIIL
Trigger: CAGGATAATTGCTTGAAGCCAGGAGGCGGAGGTTGC...TGGACACTTTATATAATATACCTGGCAGAGTAACAGGCACATAGAATGAATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484210.1
3UTR-3UTR CCA 90 bp AACATTCATTCTATGTGCCTGTTACTCTGCCAGGTATATTATATAAAGTGTCCAGCATGTTGGCCAGGATaGTCTCAATCTCTTGACCTC +
Preference number: 2 (lower is better)
Translates to: NIHSMCLLLCQVYYIKCPACWPG*SQSLDL
Trigger: GAGGTCAAGAGATTGAGACCATCCTGGCCAACATGC...TGGACACTTTATATAATATACCTGGCAGAGTAACAGGCACATAGAATGAATGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484210.1
3UTR-3UTR GCA 90 bp AACATTCATTCTATGTGCCTGTTACTCTGCCAGGTATATTATATAAAGTGTCCATTCAAGCAATTATCCTaGCTCAGCCTCCCAAGTAGC +
Preference number: 2 (lower is better)
Translates to: NIHSMCLLLCQVYYIKCPFKQLS*LSLPSS
Trigger: GCTACTTGGGAGGCTGAGGCAGGATAATTGCTTGAA...TGGACACTTTATATAATATACCTGGCAGAGTAACAGGCACATAGAATGAATGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484210.1
3UTR-3UTR TCA 90 bp AACATTCATTCTATGTGCCTGTTACTCTGCCAGGTATATTATATAAAGTGTCCACGCCCATCCAGAGGATaGTTCTTAACTTTTTCTGTG +
Preference number: 2 (lower is better)
Translates to: NIHSMCLLLCQVYYIKCPRPSRG*FLTFSV
Trigger: CACAGAAAAAGTTAAGAATCATCCTCTGGATGGGCG...TGGACACTTTATATAATATACCTGGCAGAGTAACAGGCACATAGAATGAATGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484210.1
3UTR-3UTR CCA 90 bp AACATTCATTCTATGTGCCTGTTACTCTGCCAGGTATATTATATAAAGTGTCCACCTGGCTTTAGGGTTTaGGGAATGGAGAATGATTCT +
Preference number: 2 (lower is better)
Translates to: NIHSMCLLLCQVYYIKCPPGFRV*GMENDS
Trigger: AGAATCATTCTCCATTCCCCAAACCCTAAAGCCAGG...TGGACACTTTATATAATATACCTGGCAGAGTAACAGGCACATAGAATGAATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484210.1
3UTR-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCAACATGTACAAAAATaGCTGGAGCTGACACAAAAC +
Preference number: 2 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNQHVQK*LELTQN
Trigger: GTTTTGTGTCAGCTCCAGCCATTTTTGTACATGTTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
3UTR-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCAACATGTACAAAAATaGCTGGAGCTGACACAAAAC +
Preference number: 2 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNQHVQK*LELTQN
Trigger: GTTTTGTGTCAGCTCCAGCCATTTTTGTACATGTTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
3UTR-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTATACACAGAAACTCTaGCCCATAGCCATAAAATTT +
Preference number: 2 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNYTQKL*PIAIKF
Trigger: AAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
3UTR CCA 72 bp GCACAGTGGGCTGCCTCCGCGGTAGTGCTGTGGGCCTaGGAACCTGTCTGTCTGGAGAGAGAGTCTGCTGGC +
Preference number: 3 (lower is better)
Translates to: AQWAASAVVLWA*EPVCLERESAG
Trigger: GCCAGCAGACTCTCTCTCCAGACAGACAGGTTCCCAGGCCCACAGCACTACCGCGGAGGCAGCCCACTGTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR GCA 72 bp TCATCGCTGCTCACGTCGCTGAAGTGCACAGTGGGCTaGCTCCGCGGTAGTGCTGTGGGCCTGGGAACCTGT +
Preference number: 3 (lower is better)
Translates to: SSLLTSLKCTVG*LRGSAVGLGTC
Trigger: ACAGGTTCCCAGGCCCACAGCACTACCGCGGAGGCAGCCCACTGTGCACTTCAGCGACGTGAGCAGCGATGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 72 bp CTGACAGCAGGGATCGTGAGCTGCACTGGTCCAGCCTaGAGGGGCACAAACGTGGAGTATGTGAGGCCAGCA +
Preference number: 3 (lower is better)
Translates to: LTAGIVSCTGPA*RGTNVEYVRPA
Trigger: TGCTGGCCTCACATACTCCACGTTTGTGCCCCTTCAGGCTGGACCAGTGCAGCTCACGATCCCTGCTGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 72 bp GTTGTGACGTGGACGCTGGTTGGCCCTGTATGGAAGTaGGTTCAGGCTTGGGCTTCACGTGATTTGCCGAGG +
Preference number: 3 (lower is better)
Translates to: VVTWTLVGPVWK*VQAWASRDLPR
Trigger: CCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTCACTTCCATACAGGGCCAACCAGCGTCCACGTCACAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CCA 72 bp GTGAACGACACTGACAGCAGGGATCGTGAGCTGCACTaGTCCAGCCTGAAGGGGCACAAACGTGGAGTATGT +
Preference number: 3 (lower is better)
Translates to: VNDTDSRDRELH*SSLKGHKRGVC
Trigger: ACATACTCCACGTTTGTGCCCCTTCAGGCTGGACCAGTGCAGCTCACGATCCCTGCTGTCAGTGTCGTTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CCA 72 bp TGTGCCTTCAGCAGAGGTTGTGACGTGGACGCTGGTTaGCCCTGTATGGAAGTGAGTTCAGGCTTGGGCTTC +
Preference number: 3 (lower is better)
Translates to: CAFSRGCDVDAG*PCMEVSSGLGF
Trigger: GAAGCCCAAGCCTGAACTCACTTCCATACAGGGCCAACCAGCGTCCACGTCACAACCTCTGCTGAAGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR CAA 90 bp CATTTTACTCAGGCCATCAAGCCTTGCATGGTCACCTGCAGGGGCAGGTGGATTGCCTGGCACGCGGATTaGGCCGATAGGAATACATGG +
Preference number: 3 (lower is better)
Translates to: HFTQAIKPCMVTCRGRWIAWHAD*ADRNTW
Trigger: CCATGTATTCCTATCGGCCAAATCCGCGTGCCAGGC...AATCCACCTGCCCCTGCAGGTGACCATGCAAGGCTTGATGGCCTGAGTAAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR GCA 72 bp CCCCGGAGAGAGTGTCTTCCTATTGTAGTCAGACTGTaGTGTGCTCAGGACAGTCATTCTGGTGAGCAGCGC +
Preference number: 3 (lower is better)
Translates to: PRRECLPIVVRL*CAQDSHSGEQR
Trigger: GCGCTGCTCACCAGAATGACTGTCCTGAGCACAGCACAGTCTGACTACAATAGGAAGACACTCTCTCCGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR CAA 90 bp GGGTTTGCAGTCAGAACCTGCAGTCCGACAGCATTCAGAGCCAGTCCTGGTGGAATAAGGTGTCCTCGATaGCTGCTGGGAATGCAAAGG +
Preference number: 3 (lower is better)
Translates to: GFAVRTCSPTAFRASPGGIRCPR*LLGMQR
Trigger: CCTTTGCATTCCCAGCAGCAATCGAGGACACCTTAT...TCCACCAGGACTGGCTCTGAATGCTGTCGGACTGCAGGTTCTGACTGCAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 72 bp GTGATCCTGACATCCTCGTCAGTACTCACAGGGTCCTaGAGGCTACTTCTAGATGGAAGGTGCTGCGGGCTA +
Preference number: 3 (lower is better)
Translates to: VILTSSSVLTGS*RLLLDGRCCGL
Trigger: TAGCCCGCAGCACCTTCCATCTAGAAGTAGCCTTCAGGACCCTGTGAGTACTGACGAGGATGTCAGGATCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR GCA 72 bp GTCCTGCTGACCTGGTTTGCGCTGGCTACAGAAGTCTaGTTGGGTTGTGTCTCGCATGCTTTGCTTTGGGAA +
Preference number: 3 (lower is better)
Translates to: VLLTWFALATEV*LGCVSHALLWE
Trigger: TTCCCAAAGCAAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAAACCAGGTCAGCAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CCA 72 bp TGCAGTCCGACAGCATTCAGAGCCAGTCCTGGTGGATaGACTTGTGGGGCCATATTTGTATTGGCTAGGCCT +
Preference number: 3 (lower is better)
Translates to: CSPTAFRASPGG*TCGAIFVLARP
Trigger: AGGCCTAGCCAATACAAATATGGCCCCACAAGTCCATCCACCAGGACTGGCTCTGAATGCTGTCGGACTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CCA 72 bp CAGAACCTGCAGTCCGACAGCATTCAGAGCCAGTCCTaGTGGATGGACTTGTGGGGCCATATTTGTATTGGC +
Preference number: 3 (lower is better)
Translates to: QNLQSDSIQSQS*WMDLWGHICIG
Trigger: GCCAATACAAATATGGCCCCACAAGTCCATCCACCAGGACTGGCTCTGAATGCTGTCGGACTGCAGGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CCA 72 bp CTTGGGTTGTGTCTCGCATGCTTTGCTTTGGGAAGCTaGCATTTCTGGAGCTCCCTGTGCATCAACGGCTAC +
Preference number: 3 (lower is better)
Translates to: LGLCLACFALGS*HFWSSLCINGY
Trigger: GTAGCCGTTGATGCACAGGGAGCTCCAGAAATGCCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 72 bp GGCATTTCTGGAGCTCCCTGTGCATCAACGGCTACTTaGCTGACTGAGGGGATTAAGGTGGGCAATGCTATG +
Preference number: 3 (lower is better)
Translates to: GISGAPCASTAT*LTEGIKVGNAM
Trigger: CATAGCATTGCCCACCTTAATCCCCTCAGTCAGTCAAGTAGCCGTTGATGCACAGGGAGCTCCAGAAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR GCA 72 bp CTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTaGTTTGGGAAGCTGGCATTTCTGGAGCTCCCTGTG +
Preference number: 3 (lower is better)
Translates to: LQKSAWVVSRML*FGKLAFLELPV
Trigger: CACAGGGAGCTCCAGAAATGCCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR GCA 72 bp GTGGGCCTGGGAACCTGTCTGTCTGGAGAGAGAGTCTaGTGGCCTGAGGGCTTTGTAAAAACTTCAGAATGT +
Preference number: 3 (lower is better)
Translates to: VGLGTCLSGERV*WPEGFVKTSEC
Trigger: ACATTCTGAAGTTTTTACAAAGCCCTCAGGCCAGCAGACTCTCTCTCCAGACAGACAGGTTCCCAGGCCCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 72 bp CCCTGTATGGAAGTGAGTTCAGGCTTGGGCTTCACGTaGTTTGCCGAGGCAGCCTTCTCTGTGTCCATTTTA +
Preference number: 3 (lower is better)
Translates to: PCMEVSSGLGFT*FAEAAFSVSIL
Trigger: TAAAATGGACACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTCACTTCCATACAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 72 bp GGGAACCTGTCTGTCTGGAGAGAGAGTCTGCTGGCCTaGGGGCTTTGTAAAAACTTCAGAATGTGCCTTCAG +
Preference number: 3 (lower is better)
Translates to: GNLSVWRESLLA*GLCKNFRMCLQ
Trigger: CTGAAGGCACATTCTGAAGTTTTTACAAAGCCCTCAGGCCAGCAGACTCTCTCTCCAGACAGACAGGTTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 72 bp TTTCTGGAGCTCCCTGTGCATCAACGGCTACTTGACTaGCTGAGGGGATTAAGGTGGGCAATGCTATGTTCA +
Preference number: 3 (lower is better)
Translates to: FLELPVHQRLLD*LRGLRWAMLCS
Trigger: TGAACATAGCATTGCCCACCTTAATCCCCTCAGTCAGTCAAGTAGCCGTTGATGCACAGGGAGCTCCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 72 bp TGTAAAAACTTCAGAATGTGCCTTCAGCAGAGGTTGTaGCGTGGACGCTGGTTGGCCCTGTATGGAAGTGAG +
Preference number: 3 (lower is better)
Translates to: CKNFRMCLQQRL*RGRWLALYGSE
Trigger: CTCACTTCCATACAGGGCCAACCAGCGTCCACGTCACAACCTCTGCTGAAGGCACATTCTGAAGTTTTTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR GCA 72 bp TATGGAAGTGAGTTCAGGCTTGGGCTTCACGTGATTTaGCGAGGCAGCCTTCTCTGTGTCCATTTTACTCAG +
Preference number: 3 (lower is better)
Translates to: YGSEFRLGLHVI*RGSLLCVHFTQ
Trigger: CTGAGTAAAATGGACACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTCACTTCCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CCA 72 bp GTGACTGAGGGTGTGGCTGACAGGACTGATTCAGCCTaGCTGTCCTCATCATCGTCTTCATTTTCATTGTCA +
Preference number: 3 (lower is better)
Translates to: VTEGVADRTDSA*LSSSSSSFSLS
Trigger: TGACAATGAAAATGAAGACGATGATGAGGACAGCCAGGCTGAATCAGTCCTGTCAGCCACACCCTCAGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CCA 72 bp TCTGTGTCCATTTTACTCAGGCCATCAAGCCTTGCATaGTCACCTGCAGGGGCAGGTGGATTCAGAACTTTT +
Preference number: 3 (lower is better)
Translates to: SVSILLRPSSLA*SPAGAGGFRTF
Trigger: AAAAGTTCTGAATCCACCTGCCCCTGCAGGTGACCATGCAAGGCTTGATGGCCTGAGTAAAATGGACACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR CAA 90 bp CATTCAGAGCCAGTCCTGGTGGATGGACTTGTGGGGCCATATTTGTATTGGCTATGTCTACAGACGGAATaGTGTCGTTTTCATCTCTCG +
Preference number: 3 (lower is better)
Translates to: HSEPVLVDGLVGPYLYWLCLQTE*CRFHLS
Trigger: CGAGAGATGAAAACGACACAATTCCGTCTGTAGACA...TAGCCAATACAAATATGGCCCCACAAGTCCATCCACCAGGACTGGCTCTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR TCA 72 bp AGCTTTTCCTGCCATAGAACTTCTCAGAATTTCTTCTaGCTCAGGGTAGTCCACAGACATCTGATGACACGG +
Preference number: 3 (lower is better)
Translates to: SFSCHRTSQNFF*LRVVHRHLMTR
Trigger: CCGTGTCATCAGATGTCTGTGGACTACCCTGAGTCAGAAGAAATTCTGAGAAGTTCTATGGCAGGAAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR-3UTR CAA 90 bp AACATTCATTCTATGTGCCTGTTACTCTGCCAGGTATATTATATAAAGTGTCCACGGGGTTTCGGCATGTaGGCCAGGATGGTCTCAATC +
Preference number: 3 (lower is better)
Translates to: NIHSMCLLLCQVYYIKCPRGFGM*ARMVSI
Trigger: GATTGAGACCATCCTGGCCAACATGCCGAAACCCCG...TGGACACTTTATATAATATACCTGGCAGAGTAACAGGCACATAGAATGAATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484210.1
3UTR CCA 72 bp GGGGAATGGAGAATGATTCTTTGTTGTTGTTGTTGGTaGTGGTGGTGGTGGTTCTTTGTTGTTGTTGTTGTT +
Preference number: 3 (lower is better)
Translates to: GEWRMILCCCCW*WWWWFFVVVVV
Trigger: AACAACAACAACAACAAAGAACCACCACCACCACCACCAACAACAACAACAAAGAATCATTCTCCATTCCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484210.1
3UTR CCA 72 bp GAATGGAGAATGATTCTTTGTTGTTGTTGTTGGTGGTaGTGGTGGTGGTTCTTTGTTGTTGTTGTTGTTGGT +
Preference number: 3 (lower is better)
Translates to: EWRMILCCCCWW*WWWFFVVVVVG
Trigger: ACCAACAACAACAACAACAAAGAACCACCACCACCACCACCAACAACAACAACAAAGAATCATTCTCCATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484210.1
3UTR CCA 72 bp TTTGGGGAATGGAGAATGATTCTTTGTTGTTGTTGTTaGTGGTGGTGGTGGTGGTTCTTTGTTGTTGTTGTT +
Preference number: 3 (lower is better)
Translates to: FGEWRMILCCCC*WWWWWFFVVVV
Trigger: AACAACAACAACAAAGAACCACCACCACCACCACCAACAACAACAACAAAGAATCATTCTCCATTCCCCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484210.1
CDS-3UTR GCA 90 bp TCAGGATGTGGTGAGGCCACAGAAGGCATCCCCGCTGCTGTCTGGGGGCTGTGCTCTCTCGCAGCACGCTaGCTGGCCTTCCCCGGAGAG +
Preference number: 4 (lower is better)
Translates to: SGCGEATEGIPAAVWGLCSLAAR*LAFPGE
Trigger: CTCTCCGGGGAAGGCCAGGCAGCGTGCTGCGAGAGA...GCACAGCCCCCAGACAGCAGCGGGGATGCCTTCTGTGGCCTCACCACATCCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp GGGTCAGGATGTGGTGAGGCCACAGAAGGCATCCCCGCTGCTGTCTGGGGGCTGGGGAACCTGTCTGTCTaGAGAGAGAGTCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: GSGCGEATEGIPAAVWGLGNLSV*RESLLA
Trigger: GGCCAGCAGACTCTCTCTCCAGACAGACAGGTTCCC...CAGCCCCCAGACAGCAGCGGGGATGCCTTCTGTGGCCTCACCACATCCTGACCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp AGCGCCCTGGGCAGAACGTCCATTGGGTCCGTGTGTACCCCAGAAAAGCAATCGGGACAGTCATTCTGGTaGGCAGCGCCCTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: SALGRTSIGSVCTPEKQSGQSFW*AAPWAE
Trigger: TTCTGCCCAGGGCGCTGCTCACCAGAATGACTGTCC...CGATTGCTTTTCTGGGGTACACACGGACCCAATGGACGTTCTGCCCAGGGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp AGCGCCCTGGGCAGAACGTCCATTGGGTCCGTGTGTACCCCAGAAAAGCAATCGCTTCAGCAGAGGTTGTaGCGTGGACGCTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SALGRTSIGSVCTPEKQSLQQRL*RGRWLA
Trigger: GGCCAACCAGCGTCCACGTCACAACCTCTGCTGAAG...CGATTGCTTTTCTGGGGTACACACGGACCCAATGGACGTTCTGCCCAGGGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp GAGTTCAGGCTTGGGCTTCACGTGATTTGCCGAGGCAGCCTTCTCTGTGTCCATCGCTGCTCACGTCGCTaGAGTGCACAGTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: EFRLGLHVICRGSLLCVHRCSRR*SAQWAA
Trigger: GGCAGCCCACTGTGCACTTCAGCGACGTGAGCAGCG...ATGGACACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp AGCGCCCTGGGCAGAACGTCCATTGGGTCCGTGTGTACCCCAGAAAAGCAATCGGATCGTGAGCTGCACTaGTCCAGCCTGAAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SALGRTSIGSVCTPEKQSDRELH*SSLKGH
Trigger: GTGCCCCTTCAGGCTGGACCAGTGCAGCTCACGATC...CGATTGCTTTTCTGGGGTACACACGGACCCAATGGACGTTCTGCCCAGGGCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp GAGGGTGTGGCTGACAGGACTGATTCAGCCTGGCTGTCCTCATCATCGTCTTCAAGAAGGCATCCCCGCTaGTGTCTGGGGGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: EGVADRTDSAWLSSSSSSRRHPR*CLGAVL
Trigger: GAGCACAGCCCCCAGACAGCAGCGGGGATGCCTTCT...TGAAGACGATGATGAGGACAGCCAGGCTGAATCAGTCCTGTCAGCCACACCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp GTGTCTACAGACGGAATTGTGTCGTTTTCATCTCTCGCAGCACGCTGCCTGGCCGAGACCTGGAATGTGTaGCTGAGGGGCGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VSTDGIVSFSSLAARCLAETWNV*LRGGAA
Trigger: AGCAGCCCCGCCCCTCAGGCACACATTCCAGGTCTC...GGCCAGGCAGCGTGCTGCGAGAGATGAAAACGACACAATTCCGTCTGTAGACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp AGCGCCCTGGGCAGAACGTCCATTGGGTCCGTGTGTACCCCAGAAAAGCAATCGCCTTGCATGGTCACCTaGAGGGGCAGGTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: SALGRTSIGSVCTPEKQSPCMVT*RGRWIQ
Trigger: CTGAATCCACCTGCCCCTGCAGGTGACCATGCAAGG...CGATTGCTTTTCTGGGGTACACACGGACCCAATGGACGTTCTGCCCAGGGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp GAGGGTGTGGCTGACAGGACTGATTCAGCCTGGCTGTCCTCATCATCGTCTTCACTCACGTCGCTGAAGTaGACAGTGGGCTGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: EGVADRTDSAWLSSSSSSLTSLK*TVGCLR
Trigger: GCGGAGGCAGCCCACTGTGCACTTCAGCGACGTGAG...TGAAGACGATGATGAGGACAGCCAGGCTGAATCAGTCCTGTCAGCCACACCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp AGGTGCTGCGGGCTAGCTGTGACTGAGGGTGTGGCTGACAGGACTGATTCAGCCATTCAGAGCCAGTCCTaGTGGATGGACTTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: RCCGLAVTEGVADRTDSAIQSQS*WMDLWG
Trigger: GCCCCACAAGTCCATCCACCAGGACTGGCTCTGAAT...GGCTGAATCAGTCCTGTCAGCCACACCCTCAGTCACAGCTAGCCCGCAGCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp CGCCCTGGGCAGAACGTCCATTGGGTCCGTGTGTACCCCAGAAAAGCAATCGGTCCATCAAGCCTTGCATaGTCACCTGCAGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: RPGQNVHWVRVYPRKAIGPSSLA*SPAGAG
Trigger: ACCTGCCCCTGCAGGTGACCATGCAAGGCTTGATGG...ACCGATTGCTTTTCTGGGGTACACACGGACCCAATGGACGTTCTGCCCAGGGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp GAGGGTGTGGCTGACAGGACTGATTCAGCCTGGCTGTCCTCATCATCGTCTTCAAGGGTCAGGATGTGGTaGGGCCACAGAAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: EGVADRTDSAWLSSSSSSRVRMW*GHRRHP
Trigger: GGGATGCCTTCTGTGGCCTCACCACATCCTGACCCT...TGAAGACGATGATGAGGACAGCCAGGCTGAATCAGTCCTGTCAGCCACACCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp TCAGGATGTGGTGAGGCCACAGAAGGCATCCCCGCTGCTGTCTGGGGGCTGTGCTTTGCAGTCAGAACCTaGAGTCCGACAGCATTCAGA +
Preference number: 4 (lower is better)
Translates to: SGCGEATEGIPAAVWGLCFAVRT*SPTAFR
Trigger: TCTGAATGCTGTCGGACTGCAGGTTCTGACTGCAAA...GCACAGCCCCCAGACAGCAGCGGGGATGCCTTCTGTGGCCTCACCACATCCTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp GTGTCTACAGACGGAATTGTGTCGTTTTCATCTCTCGCAGCACGCTGCCTGGCCCAGGCCATCAAGCCTTaGATGGTCACCTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: VSTDGIVSFSSLAARCLAQAIKP*MVTCRG
Trigger: GCCCCTGCAGGTGACCATGCAAGGCTTGATGGCCTG...GGCCAGGCAGCGTGCTGCGAGAGATGAAAACGACACAATTCCGTCTGTAGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp GGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTGCTTTGGGAAGCTGGATCCCCGCTGCTGTCTaGGGGCTGTGCTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: GYRSLLGLCLACFALGSWIPAAV*GLCSAA
Trigger: TGCAGCTGAGCACAGCCCCCAGACAGCAGCGGGGAT...CCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CAA 72 bp GTGCCTGAGGGGCGGGGCTGCTTTGTGATGAAGGGTTaGCAGTCAGAACCTGCAGTCCGACAGCATTCAGAG +
Preference number: 4 (lower is better)
Translates to: VPEGRGCFVMKG*QSEPAVRQHSE
Trigger: CTCTGAATGCTGTCGGACTGCAGGTTCTGACTGCAAACCCTTCATCACAAAGCAGCCCCGCCCCTCAGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp GGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTGCTTTGGGAAGCTGGGAGACTCGGTCCTGCTaGCCTGGTTTGCGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: GYRSLLGLCLACFALGSWETRSC*PGLRWL
Trigger: TAGCCAGCGCAAACCAGGTCAGCAGGACCGAGTCTC...CCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp GGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTGCTTTGGGAAGCTGGGGCTTGGGCTTCACGTaGTTTGCCGAGGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: GYRSLLGLCLACFALGSWGLGFT*FAEAAF
Trigger: GAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCC...CCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp CTGACCTGGTTTGCGCTGGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTCCTGAGGGGCGGGGCTaGTTTGTGATGAAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LTWFALATEVCLGCVSHAPEGRG*FVMKGL
Trigger: CAAACCCTTCATCACAAAGCAGCCCCGCCCCTCAGG...AGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAAACCAGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp GTCTACAGACGGAATTGTGTCGTTTTCATCTCTCGCAGCACGCTGCCTGGCCTTAAGTGCACAGTGGGCTaGCTCCGCGGTAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: VYRRNCVVFISRSTLPGLKCTVG*LRGSAV
Trigger: CACAGCACTACCGCGGAGGCAGCCCACTGTGCACTT...AAGGCCAGGCAGCGTGCTGCGAGAGATGAAAACGACACAATTCCGTCTGTAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp CGCCCTGGGCAGAACGTCCATTGGGTCCGTGTGTACCCCAGAAAAGCAATCGGTAAGGCTACTTCTAGATaGAAGGTGCTGCGGGCTAGC +
Preference number: 4 (lower is better)
Translates to: RPGQNVHWVRVYPRKAIGKATSR*KVLRAS
Trigger: GCTAGCCCGCAGCACCTTCCATCTAGAAGTAGCCTT...ACCGATTGCTTTTCTGGGGTACACACGGACCCAATGGACGTTCTGCCCAGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp TCAGAATGTGCCTTCAGCAGAGGTTGTGACGTGGACGCTGGTTGGCCCTGTATGGCAGAGGTTGTGACGTaGACGCTGGTTGGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: SECAFSRGCDVDAGWPCMAEVVT*TLVGPV
Trigger: TACAGGGCCAACCAGCGTCCACGTCACAACCTCTGC...CATACAGGGCCAACCAGCGTCCACGTCACAACCTCTGCTGAAGGCACATTCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp CCTATGAGTACCCAAAGTTCTGTGAACGACACTGACAGCAGGGATCGTGAGCTGTGCACTGGTCCAGCCTaGAGGGGCACAAACGTGGAG +
Preference number: 4 (lower is better)
Translates to: PMSTQSSVNDTDSRDRELCTGPA*RGTNVE
Trigger: CTCCACGTTTGTGCCCCTTCAGGCTGGACCAGTGCA...CAGCTCACGATCCCTGCTGTCAGTGTCGTTCACAGAACTTTGGGTACTCATAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp CGCCCTGGGCAGAACGTCCATTGGGTCCGTGTGTACCCCAGAAAAGCAATCGGTGAGAGTCTGCTGGCCTaGGGGCTTTGTAAAAACTTC +
Preference number: 4 (lower is better)
Translates to: RPGQNVHWVRVYPRKAIGESLLA*GLCKNF
Trigger: GAAGTTTTTACAAAGCCCTCAGGCCAGCAGACTCTC...ACCGATTGCTTTTCTGGGGTACACACGGACCCAATGGACGTTCTGCCCAGGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp AGCGCCCTGGGCAGAACGTCCATTGGGTCCGTGTGTACCCCAGAAAAGCAATCGTTCTGGAGCTCCCTGTaGATCAACGGCTACTTGACT +
Preference number: 4 (lower is better)
Translates to: SALGRTSIGSVCTPEKQSFWSSL*INGYLT
Trigger: AGTCAAGTAGCCGTTGATGCACAGGGAGCTCCAGAA...CGATTGCTTTTCTGGGGTACACACGGACCCAATGGACGTTCTGCCCAGGGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp GAGTTCAGGCTTGGGCTTCACGTGATTTGCCGAGGCAGCCTTCTCTGTGTCCATCCTGCTGACCTGGTTTaGGCTGGCTACAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: EFRLGLHVICRGSLLCVHPADLV*AGYRSL
Trigger: CAGACTTCTGTAGCCAGCGCAAACCAGGTCAGCAGG...ATGGACACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp CATTTTACTCAGGCCATCAAGCCTTGCATGGTCACCTGCAGGGGCAGGTGGATTGGGCAGAACGTCCATTaGGTCCGTGTGTACCCCAGA +
Preference number: 4 (lower is better)
Translates to: HFTQAIKPCMVTCRGRWIGQNVH*VRVYPR
Trigger: TCTGGGGTACACACGGACCCAATGGACGTTCTGCCC...AATCCACCTGCCCCTGCAGGTGACCATGCAAGGCTTGATGGCCTGAGTAAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp GTCTACAGACGGAATTGTGTCGTTTTCATCTCTCGCAGCACGCTGCCTGGCCTTCAGAGCCAGTCCTGGTaGATGGACTTGTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: VYRRNCVVFISRSTLPGLQSQSW*MDLWGH
Trigger: ATGGCCCCACAAGTCCATCCACCAGGACTGGCTCTG...AAGGCCAGGCAGCGTGCTGCGAGAGATGAAAACGACACAATTCCGTCTGTAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp TCAGAATGTGCCTTCAGCAGAGGTTGTGACGTGGACGCTGGTTGGCCCTGTATGGACGTGGACGCTGGTTaGCCCTGTATGGAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: SECAFSRGCDVDAGWPCMDVDAG*PCMEVS
Trigger: ACTCACTTCCATACAGGGCCAACCAGCGTCCACGTC...CATACAGGGCCAACCAGCGTCCACGTCACAACCTCTGCTGAAGGCACATTCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CAA 72 bp GATGACACGGGGACCTGGAAGTGTCTACAGACGGAATaGTGTCGTTTTCATCTCTCGCAGCACGCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: DDTGTWKCLQTE*CRFHLSQHAAW
Trigger: CCAGGCAGCGTGCTGCGAGAGATGAAAACGACACAATTCCGTCTGTAGACACTTCCAGGTCCCCGTGTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp GTGTCTACAGACGGAATTGTGTCGTTTTCATCTCTCGCAGCACGCTGCCTGGCCGTACCCAAAGTTCTGTaGACGACACTGACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: VSTDGIVSFSSLAARCLAVPKVL*TTLTAG
Trigger: CCCTGCTGTCAGTGTCGTTCACAGAACTTTGGGTAC...GGCCAGGCAGCGTGCTGCGAGAGATGAAAACGACACAATTCCGTCTGTAGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp AGCGCCCTGGGCAGAACGTCCATTGGGTCCGTGTGTACCCCAGAAAAGCAATCGTGCCAGACACTTCTGTaGCCGTATTCCTATGAGTAC +
Preference number: 4 (lower is better)
Translates to: SALGRTSIGSVCTPEKQSCQTLL*PYSYEY
Trigger: GTACTCATAGGAATACGGTCACAGAAGTGTCTGGCA...CGATTGCTTTTCTGGGGTACACACGGACCCAATGGACGTTCTGCCCAGGGCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp TCAGAATGTGCCTTCAGCAGAGGTTGTGACGTGGACGCTGGTTGGCCCTGTATGCTTCTAGATGGAAGGTaGTGCGGGCTAGCTGTGACT +
Preference number: 4 (lower is better)
Translates to: SECAFSRGCDVDAGWPCMLLDGR*CGLAVT
Trigger: AGTCACAGCTAGCCCGCAGCACCTTCCATCTAGAAG...CATACAGGGCCAACCAGCGTCCACGTCACAACCTCTGCTGAAGGCACATTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp CTGACCTGGTTTGCGCTGGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTGGTGTCCTCGATTGCTaGTGGGAATGCAAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: LTWFALATEVCLGCVSHAGVLDC*WECKGR
Trigger: CCTTCCTTTGCATTCCCAGCAGCAATCGAGGACACC...AGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAAACCAGGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp GACCTGGTTTGCGCTGGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTAACGAGGGGAGTGACTaGAAGCCTGGGGTACTTAGG +
Preference number: 4 (lower is better)
Translates to: DLVCAGYRSLLGLCLACFNEGSD*KPGVLR
Trigger: CCTAAGTACCCCAGGCTTGCAGTCACTCCCCTCGTT...AAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAAACCAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp TCAGAATGTGCCTTCAGCAGAGGTTGTGACGTGGACGCTGGTTGGCCCTGTATGGGGTTGTGTCTCGCATaGTTTGCTTTGGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SECAFSRGCDVDAGWPCMGLCLA*FALGSW
Trigger: CCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCC...CATACAGGGCCAACCAGCGTCCACGTCACAACCTCTGCTGAAGGCACATTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp ATTTGGCCGATAGGAATACATGGCACAACACTGCTTAATTCAGCCACTCCAGCATCGCAGCACGCTGCCTaGCCTTCCCCGGAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: IWPIGIHGTTLLNSATPASQHAA*PSPERV
Trigger: CACTCTCTCCGGGGAAGGCCAGGCAGCGTGCTGCGA...TGCTGGAGTGGCTGAATTAAGCAGTGTTGTGCCATGTATTCCTATCGGCCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp GGAAGTGAGTTCAGGCTTGGGCTTCACGTGATTTGCCGAGGCAGCCTTCTCTGTGATGACACGGGGACCTaGAAGTGTCTACAGACGGAA +
Preference number: 4 (lower is better)
Translates to: GSEFRLGLHVICRGSLLCDDTGT*KCLQTE
Trigger: TTCCGTCTGTAGACACTTCCAGGTCCCCGTGTCATC...ACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTCACTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp CTGACCTGGTTTGCGCTGGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTGGAAGCTGGCATTTCTaGAGCTCCCTGTGCATCAAC +
Preference number: 4 (lower is better)
Translates to: LTWFALATEVCLGCVSHAGSWHF*SSLCIN
Trigger: GTTGATGCACAGGGAGCTCCAGAAATGCCAGCTTCC...AGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAAACCAGGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp GGGTTTGCAGTCAGAACCTGCAGTCCGACAGCATTCAGAGCCAGTCCTGGTGGATTTGCTTTGGGAAGCTaGCATTTCTGGAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: GFAVRTCSPTAFRASPGGFALGS*HFWSSL
Trigger: CAGGGAGCTCCAGAAATGCCAGCTTCCCAAAGCAAA...TCCACCAGGACTGGCTCTGAATGCTGTCGGACTGCAGGTTCTGACTGCAAACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CAA 72 bp GACCTGGTTTGCGCTGGCTACAGAAGTCTGCTTGGGTaGTGTCTCGCATGCTTTGCTTTGGGAAGCTGGCAT +
Preference number: 4 (lower is better)
Translates to: DLVCAGYRSLLG*CLACFALGSWH
Trigger: ATGCCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAAACCAGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CAA 72 bp CTGCTGACCTGGTTTGCGCTGGCTACAGAAGTCTGCTaGGGTTGTGTCTCGCATGCTTTGCTTTGGGAAGCT +
Preference number: 4 (lower is better)
Translates to: LLTWFALATEVC*GCVSHALLWEA
Trigger: AGCTTCCCAAAGCAAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAAACCAGGTCAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTGGAGCTGCGCTGCTaGTGGCGGCGGCCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLELRC*WRRPRL
Trigger: GAGCCGCGGCCGCCGCCATCAGCAGCGCAGCTCCAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp GAGGGTGTGGCTGACAGGACTGATTCAGCCTGGCTGTCCTCATCATCGTCTTCAGTACTCACAGGGTCCTaGAGGCTACTTCTAGATGGA +
Preference number: 4 (lower is better)
Translates to: EGVADRTDSAWLSSSSSSVLTGS*RLLLDG
Trigger: TCCATCTAGAAGTAGCCTTCAGGACCCTGTGAGTAC...TGAAGACGATGATGAGGACAGCCAGGCTGAATCAGTCCTGTCAGCCACACCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp GACCTGGTTTGCGCTGGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTCAAACGTGGAGTATGTaGGGCCAGCAGGTACCACAT +
Preference number: 4 (lower is better)
Translates to: DLVCAGYRSLLGLCLACFQTWSM*GQQVPH
Trigger: ATGTGGTACCTGCTGGCCTCACATACTCCACGTTTG...AAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAAACCAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp CATTCAGAGCCAGTCCTGGTGGATGGACTTGTGGGGCCATATTTGTATTGGCTAACTGTAGGTAACCCCTaGGGAGACTCGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: HSEPVLVDGLVGPYLYWLTVGNP*GDSVLL
Trigger: CAGCAGGACCGAGTCTCCTCAGGGGTTACCTACAGT...TAGCCAATACAAATATGGCCCCACAAGTCCATCCACCAGGACTGGCTCTGAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp CCTATGAGTACCCAAAGTTCTGTGAACGACACTGACAGCAGGGATCGTGAGCTGGGCCCTGTATGGAAGTaGGTTCAGGCTTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: PMSTQSSVNDTDSRDRELGPVWK*VQAWAS
Trigger: TGAAGCCCAAGCCTGAACTCACTTCCATACAGGGCC...CAGCTCACGATCCCTGCTGTCAGTGTCGTTCACAGAACTTTGGGTACTCATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp AAAGCAATCGGTGATCCTGACATCCTCGTCAGTACTCACAGGGTCCTGAAGGCTCTAGATGGAAGGTGCTaGGGGCTAGCTGTGACTGAG +
Preference number: 4 (lower is better)
Translates to: KAIGDPDILVSTHRVLKALDGRC*GLAVTE
Trigger: CTCAGTCACAGCTAGCCCGCAGCACCTTCCATCTAG...AGCCTTCAGGACCCTGTGAGTACTGACGAGGATGTCAGGATCACCGATTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp GACCTGGTTTGCGCTGGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTGCCAGTCCTGGTGGATaGACTTGTGGGGCCATATTT +
Preference number: 4 (lower is better)
Translates to: DLVCAGYRSLLGLCLACFASPGG*TCGAIF
Trigger: AAATATGGCCCCACAAGTCCATCCACCAGGACTGGC...AAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAAACCAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp CCTATGAGTACCCAAAGTTCTGTGAACGACACTGACAGCAGGGATCGTGAGCTGCAAGATCTGGAGACCTaGAATGTGTGCCTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: PMSTQSSVNDTDSRDRELQDLET*NVCLRG
Trigger: GCCCCTCAGGCACACATTCCAGGTCTCCAGATCTTG...CAGCTCACGATCCCTGCTGTCAGTGTCGTTCACAGAACTTTGGGTACTCATAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp CCTATGAGTACCCAAAGTTCTGTGAACGACACTGACAGCAGGGATCGTGAGCTGTCGGTCCTGCTGACCTaGTTTGCGCTGGCTACAGAA +
Preference number: 4 (lower is better)
Translates to: PMSTQSSVNDTDSRDRELSVLLT*FALATE
Trigger: TTCTGTAGCCAGCGCAAACCAGGTCAGCAGGACCGA...CAGCTCACGATCCCTGCTGTCAGTGTCGTTCACAGAACTTTGGGTACTCATAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
3UTR CAA 72 bp CCTTCTCTGTGTCCATTTTACTCAGGCCATCAAGCCTaGCATGGTCACCTGCAGGGGCAGGTGGATTCAGAA +
Preference number: 4 (lower is better)
Translates to: PSLCPFYSGHQA*HGHLQGQVDSE
Trigger: TTCTGAATCCACCTGCCCCTGCAGGTGACCATGCAAGGCTTGATGGCCTGAGTAAAATGGACACAGAGAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTGGAGCTGCGCTGCTaGTGGCGGCGGCCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLELRC*WRRPRL
Trigger: GAGCCGCGGCCGCCGCCATCAGCAGCGCAGCTCCAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp GTCTACAGACGGAATTGTGTCGTTTTCATCTCTCGCAGCACGCTGCCTGGCCTTGCATCAACGGCTACTTaGCTGACTGAGGGGATTAAG +
Preference number: 4 (lower is better)
Translates to: VYRRNCVVFISRSTLPGLASTAT*LTEGIK
Trigger: CTTAATCCCCTCAGTCAGTCAAGTAGCCGTTGATGC...AAGGCCAGGCAGCGTGCTGCGAGAGATGAAAACGACACAATTCCGTCTGTAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGCCGGCCCTGGAGCTaGGCTGCTGATGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSRPWS*AADGGG
Trigger: GCCGCCGCCATCAGCAGCGCAGCTCCAGGGCCGGCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp GGGTTTGCAGTCAGAACCTGCAGTCCGACAGCATTCAGAGCCAGTCCTGGTGGATACATGGCACAACACTaGTTAATTCAGCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: GFAVRTCSPTAFRASPGGYMAQH*LIQPLQ
Trigger: CTGGAGTGGCTGAATTAAGCAGTGTTGTGCCATGTA...TCCACCAGGACTGGCTCTGAATGCTGTCGGACTGCAGGTTCTGACTGCAAACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp CATTCAGAGCCAGTCCTGGTGGATGGACTTGTGGGGCCATATTTGTATTGGCTACCTGGCACGCGGATTTaGCCGATAGGAATACATGGC +
Preference number: 4 (lower is better)
Translates to: HSEPVLVDGLVGPYLYWLPGTRI*PIGIHG
Trigger: GCCATGTATTCCTATCGGCCAAATCCGCGTGCCAGG...TAGCCAATACAAATATGGCCCCACAAGTCCATCCACCAGGACTGGCTCTGAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp GGAAGTGAGTTCAGGCTTGGGCTTCACGTGATTTGCCGAGGCAGCCTTCTCTGTCTACAGAAGTCTGCTTaGGTTGTGTCTCGCATGCTT +
Preference number: 4 (lower is better)
Translates to: GSEFRLGLHVICRGSLLCLQKSA*VVSRML
Trigger: AAGCATGCGAGACACAACCCAAGCAGACTTCTGTAG...ACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTCACTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp GACCTGGTTTGCGCTGGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTGGAGAGAGAGTCTGCTaGCCTGAGGGCTTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: DLVCAGYRSLLGLCLACFGERVC*PEGFVK
Trigger: TTTTACAAAGCCCTCAGGCCAGCAGACTCTCTCTCC...AAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAAACCAGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp GGAAGTGAGTTCAGGCTTGGGCTTCACGTGATTTGCCGAGGCAGCCTTCTCTGTAGGAAGTCTTACAGATaGTGGGCTCTGTGTTATAGC +
Preference number: 4 (lower is better)
Translates to: GSEFRLGLHVICRGSLLCRKSYR*WALCYS
Trigger: GCTATAACACAGAGCCCATCATCTGTAAGACTTCCT...ACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTCACTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp ATTTGGCCGATAGGAATACATGGCACAACACTGCTTAATTCAGCCACTCCAGCAGGGGTACTTAGGTTCTaGAGGCCTGGCACGCGGATT +
Preference number: 4 (lower is better)
Translates to: IWPIGIHGTTLLNSATPAGVLRF*RPGTRI
Trigger: AATCCGCGTGCCAGGCCTTCAGAACCTAAGTACCCC...TGCTGGAGTGGCTGAATTAAGCAGTGTTGTGCCATGTATTCCTATCGGCCAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp CATTCAGAGCCAGTCCTGGTGGATGGACTTGTGGGGCCATATTTGTATTGGCTACAACGGCTACTTGACTaGCTGAGGGGATTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: HSEPVLVDGLVGPYLYWLQRLLD*LRGLRW
Trigger: CCACCTTAATCCCCTCAGTCAGTCAAGTAGCCGTTG...TAGCCAATACAAATATGGCCCCACAAGTCCATCCACCAGGACTGGCTCTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGCCGGCCCTGGAGCTaGGCTGCTGATGGCGGCGGC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSRPWS*AADGGG
Trigger: GCCGCCGCCATCAGCAGCGCAGCTCCAGGGCCGGCT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGGTGCTGCGGGCTAGCTGTGACTGAGGGTGTGGCTGACAGGACTGATTCAGCCAGCTGCTTTTCCACTTaGTTGAATAGACCAATAAGT +
Preference number: 4 (lower is better)
Translates to: RCCGLAVTEGVADRTDSASCFST*LNRPIS
Trigger: ACTTATTGGTCTATTCAAGCAAGTGGAAAAGCAGCT...GGCTGAATCAGTCCTGTCAGCCACACCCTCAGTCACAGCTAGCCCGCAGCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp GGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTGCTTTGGGAAGCTGGGCTATGTTCAAGATCTaGAGACCTGGAATGTGTGCC +
Preference number: 4 (lower is better)
Translates to: GYRSLLGLCLACFALGSWAMFKI*RPGMCA
Trigger: GGCACACATTCCAGGTCTCCAGATCTTGAACATAGC...CCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp GGAAGTGAGTTCAGGCTTGGGCTTCACGTGATTTGCCGAGGCAGCCTTCTCTGTTCCAGTGTTCTGTTTTaGATTAAGGAGAGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: GSEFRLGLHVICRGSLLCSSVLF*IKESKC
Trigger: GCACTTGCTCTCCTTAATTCAAAACAGAACACTGGA...ACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTCACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp CGCCCTGGGCAGAACGTCCATTGGGTCCGTGTGTACCCCAGAAAAGCAATCGGTCAGATCGCTCATAACTaGATCTCTGTTTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: RPGQNVHWVRVYPRKAIGQIAHN*ISVFHL
Trigger: AAGATGAAAAACAGAGATTCAGTTATGAGCGATCTG...ACCGATTGCTTTTCTGGGGTACACACGGACCCAATGGACGTTCTGCCCAGGGCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp GGAAGTGAGTTCAGGCTTGGGCTTCACGTGATTTGCCGAGGCAGCCTTCTCTGTATTTTCCTCTTCCCCTaGCTCGGACATATACATACT +
Preference number: 4 (lower is better)
Translates to: GSEFRLGLHVICRGSLLCIFLFP*LGHIHT
Trigger: AGTATGTATATGTCCGAGGCAGGGGAAGAGGAAAAT...ACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTCACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp AAAGCAATCGGTGATCCTGACATCCTCGTCAGTACTCACAGGGTCCTGAAGGCTGTGTCTCGCATGCTTTaGTTTGGGAAGCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: KAIGDPDILVSTHRVLKAVSRML*FGKLAF
Trigger: AAATGCCAGCTTCCCAAAGCAAAGCATGCGAGACAC...AGCCTTCAGGACCCTGTGAGTACTGACGAGGATGTCAGGATCACCGATTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp CATTCAGAGCCAGTCCTGGTGGATGGACTTGTGGGGCCATATTTGTATTGGCTACTGGCTACAGAAGTCTaGTTGGGTTGTGTCTCGCAT +
Preference number: 4 (lower is better)
Translates to: HSEPVLVDGLVGPYLYWLLATEV*LGCVSH
Trigger: ATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAG...TAGCCAATACAAATATGGCCCCACAAGTCCATCCACCAGGACTGGCTCTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp GTGTCTACAGACGGAATTGTGTCGTTTTCATCTCTCGCAGCACGCTGCCTGGCCATTGTCATCCTCATCTaGGCCATCAGATTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: VSTDGIVSFSSLAARCLAIVILI*AIRFFK
Trigger: CTTGAAGAATCTGATGGCCCAGATGAGGATGACAAT...GGCCAGGCAGCGTGCTGCGAGAGATGAAAACGACACAATTCCGTCTGTAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp CATTCAGAGCCAGTCCTGGTGGATGGACTTGTGGGGCCATATTTGTATTGGCTAAGGACTGATTCAGCCTaGCTGTCCTCATCATCGTCT +
Preference number: 4 (lower is better)
Translates to: HSEPVLVDGLVGPYLYWLRTDSA*LSSSSS
Trigger: AGACGATGATGAGGACAGCCAGGCTGAATCAGTCCT...TAGCCAATACAAATATGGCCCCACAAGTCCATCCACCAGGACTGGCTCTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp GACCTGGTTTGCGCTGGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTCTGAGGGGATTAAGGTaGGCAATGCTATGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: DLVCAGYRSLLGLCLACFLRGLR*AMLCSR
Trigger: TCTTGAACATAGCATTGCCCACCTTAATCCCCTCAG...AAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAGCGCAAACCAGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCGCTGCTCACGTCGCTaGAGTGCACAGTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRCSRR*SAQWAA
Trigger: GGCAGCCCACTGTGCACTTCAGCGACGTGAGCAGCG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTCATCTTTAGTCTTAAAGGAGAAGTTACAGTAAGTGCAGTGGTAGGGGCGGACGGGCTTCACGTGATTTaGCGAGGCAGCCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: FIFSLKGEVTVSAVVGADGLHVI*RGSLLC
Trigger: ACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCC...GTCCGCCCCTACCACTGCACTTACTGTAACTTCTCCTTTAAGACTAAAGATGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCGCAGCACGCTGCCTaGCCTTCCCCGGAGAGAGTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSQHAA*PSPERV
Trigger: CACTCTCTCCGGGGAAGGCCAGGCAGCGTGCTGCGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
3UTR CAA 72 bp TGTGGGGCCATATTTGTATTGGCTAGGCCTACAATATaGACGGTTTCCATGCTTAACGAGGGGAGTGACTGC +
Preference number: 4 (lower is better)
Translates to: CGAIFVLARPTI*TVSMLNEGSDC
Trigger: GCAGTCACTCCCCTCGTTAAGCATGGAAACCGTCAATATTGTAGGCCTAGCCAATACAAATATGGCCCCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGCACCTTCTGCACCTaGCTTCCAAGGGGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGTFCT*LPRGLS
Trigger: GCTCAGGCCCCTTGGAAGTCAGGTGCAGAAGGTGCC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp CATTCAGAGCCAGTCCTGGTGGATGGACTTGTGGGGCCATATTTGTATTGGCTACTAGGCCTACAATATTaGCGGTTTCCATGCTTAACG +
Preference number: 4 (lower is better)
Translates to: HSEPVLVDGLVGPYLYWLLGLQY*RFPCLT
Trigger: CGTTAAGCATGGAAACCGTCAATATTGTAGGCCTAG...TAGCCAATACAAATATGGCCCCACAAGTCCATCCACCAGGACTGGCTCTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCGCTGCTCACGTCGCTaGAGTGCACAGTGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNRCSRR*SAQWAA
Trigger: GGCAGCCCACTGTGCACTTCAGCGACGTGAGCAGCG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCGTCTGTTCCCAGATaGCGGAGGACCCAGCGACTC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNASVPR*RRTQRL
Trigger: GAGTCGCTGGGTCCTCCGGCATCTGGGAACAGACGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCTCTCGCAGCACGCTaGCTGGCCTTCCCCGGAGAG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSLAAR*LAFPGE
Trigger: CTCTCCGGGGAAGGCCAGGCAGCGTGCTGCGAGAGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGAGACCTGGAATGTGTaGCTGAGGGGCGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNETWNV*LRGGAA
Trigger: AGCAGCCCCGCCCCTCAGGCACACATTCCAGGTCTC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTCACGTCGCTGAAGTaGACAGTGGGCTGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLTSLK*TVGCLR
Trigger: GCGGAGGCAGCCCACTGTGCACTTCAGCGACGTGAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCAGGCTGCAGCTCCATaGCGCCCAGGTCATGCTGTC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNQAAAP*RPGHAV
Trigger: GACAGCATGACCTGGGCGCCATGGAGCTGCAGCCTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCGGGGATGCCCACTCTaGGGCACAGGAGCGTTAGGT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRGCPL*GTGALG
Trigger: ACCTAACGCTCCTGTGCCCCAGAGTGGGCATCCCCG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATCCCCGCTGCTGTCTaGGGGCTGTGCTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNIPAAV*GLCSAA
Trigger: TGCAGCTGAGCACAGCCCCCAGACAGCAGCGGGGAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTCATCTTTAGTCTTAAAGGAGAAGTTACAGTAAGTGCAGTGGTAGGGGCGGACGTCCTCGATTGCTGCTaGGAATGCAAAGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: FIFSLKGEVTVSAVVGADVLDCC*ECKGRW
Trigger: CCACCTTCCTTTGCATTCCCAGCAGCAATCGAGGAC...GTCCGCCCCTACCACTGCACTTACTGTAACTTCTCCTTTAAGACTAAAGATGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGACTTCCAAGGGGCCTaGGCTCTGGTGGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNDFQGA*ALVVAE
Trigger: CTCTGCTACCACCAGAGCTCAGGCCCCTTGGAAGTC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGCACCTTCTGCACCTaGCTTCCAAGGGGCCTGAGC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGTFCT*LPRGLS
Trigger: GCTCAGGCCCCTTGGAAGTCAGGTGCAGAAGGTGCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGGGTCAGGATGTGGTaGGGCCACAGAAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRVRMW*GHRRHP
Trigger: GGGATGCCTTCTGTGGCCTCACCACATCCTGACCCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGCACTGGTCCAGCCTaGAGGGGCACAAACGTGGAG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNCTGPA*RGTNVE
Trigger: CTCCACGTTTGTGCCCCTTCAGGCTGGACCAGTGCA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGAGACTCGGTCCTGCTaGCCTGGTTTGCGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNETRSC*PGLRWL
Trigger: TAGCCAGCGCAAACCAGGTCAGCAGGACCGAGTCTC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGCTTGGGCTTCACGTaGTTTGCCGAGGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGLGFT*FAEAAF
Trigger: GAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTTCAGCAGAGGTTGTaGCGTGGACGCTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLQQRL*RGRWLA
Trigger: GGCCAACCAGCGTCCACGTCACAACCTCTGCTGAAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCCGGGCACAGGGCTGTaGTCAGGTTCTCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNPGTGL*SGSLMA
Trigger: AGCCATGAGAGAACCTGAGCACAGCCCTGTGCCCGG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCGTCTGTTCCCAGATaGCGGAGGACCCAGCGACTC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNASVPR*RRTQRL
Trigger: GAGTCGCTGGGTCCTCCGGCATCTGGGAACAGACGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGAAGGCATCCCCGCTaGTGTCTGGGGGCTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNRRHPR*CLGAVL
Trigger: GAGCACAGCCCCCAGACAGCAGCGGGGATGCCTTCT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGAGACCTGGAATGTGTaGCTGAGGGGCGGGGCTGCT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNETWNV*LRGGAA
Trigger: AGCAGCCCCGCCCCTCAGGCACACATTCCAGGTCTC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCAGGCCATCAAGCCTTaGATGGTCACCTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNQAIKP*MVTCRG
Trigger: GCCCCTGCAGGTGACCATGCAAGGCTTGATGGCCTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAAGTGCACAGTGGGCTaGCTCCGCGGTAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNKCTVG*LRGSAV
Trigger: CACAGCACTACCGCGGAGGCAGCCCACTGTGCACTT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTCACGTCGCTGAAGTaGACAGTGGGCTGCCTCCGC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLTSLK*TVGCLR
Trigger: GCGGAGGCAGCCCACTGTGCACTTCAGCGACGTGAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp GGAAGTGAGTTCAGGCTTGGGCTTCACGTGATTTGCCGAGGCAGCCTTCTCTGTATATCTTGCTTAAGCTaGTTTTCCACTTGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: GSEFRLGLHVICRGSLLCISCLS*FSTCLN
Trigger: ATTCAAGCAAGTGGAAAAGCAGCTTAAGCAAGATAT...ACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTCACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCAGGCTGCAGCTCCATaGCGCCCAGGTCATGCTGTC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNQAAAP*RPGHAV
Trigger: GACAGCATGACCTGGGCGCCATGGAGCTGCAGCCTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATACAGCTTGGGATCCATaGTCTGCTCAGGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNTAWDP*SAQGPW
Trigger: CCAGGGGCCCTGAGCAGACCATGGATCCCAAGCTGT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATCCCCGCTGCTGTCTaGGGGCTGTGCTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNIPAAV*GLCSAA
Trigger: TGCAGCTGAGCACAGCCCCCAGACAGCAGCGGGGAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGATCGTGAGCTGCACTaGTCCAGCCTGAAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNDRELH*SSLKGH
Trigger: GTGCCCCTTCAGGCTGGACCAGTGCAGCTCACGATC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
3UTR CAA 72 bp AGTCCTGGTGGATGGACTTGTGGGGCCATATTTGTATaGGCTAGGCCTACAATATTGACGGTTTCCATGCTT +
Preference number: 4 (lower is better)
Translates to: SPGGWTCGAIFV*ARPTILTVSML
Trigger: AAGCATGGAAACCGTCAATATTGTAGGCCTAGCCAATACAAATATGGCCCCACAAGTCCATCCACCAGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGGGTGTTGACGTGGTaGCAAGAGCTGCAGAGGGTC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRVLTW*QELQRV
Trigger: GACCCTCTGCAGCTCTTGTCACCACGTCAACACCCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGCCTTGCTCCTCACTaGCATGGCTTCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNCLAPH*HGFTSS
Trigger: GCTGCTGGTGAAGCCATGTCAGTGAGGAGCAAGGCA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGACTTCCAAGGGGCCTaGGCTCTGGTGGTAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNDFQGA*ALVVAE
Trigger: CTCTGCTACCACCAGAGCTCAGGCCCCTTGGAAGTC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGACAGTCATTCTGGTaGGCAGCGCCCTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGQSFW*AAPWAE
Trigger: TTCTGCCCAGGGCGCTGCTCACCAGAATGACTGTCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGGGTCAGGATGTGGTaGGGCCACAGAAGGCATCCC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNRVRMW*GHRRHP
Trigger: GGGATGCCTTCTGTGGCCTCACCACATCCTGACCCT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGCACTGGTCCAGCCTaGAGGGGCACAAACGTGGAG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNCTGPA*RGTNVE
Trigger: CTCCACGTTTGTGCCCCTTCAGGCTGGACCAGTGCA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGAGACTCGGTCCTGCTaGCCTGGTTTGCGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNETRSC*PGLRWL
Trigger: TAGCCAGCGCAAACCAGGTCAGCAGGACCGAGTCTC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATACTGTAGGTAACCCCTaGGGAGACTCGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNTVGNP*GDSVLL
Trigger: CAGCAGGACCGAGTCTCCTCAGGGGTTACCTACAGT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGCTTGGGCTTCACGTaGTTTGCCGAGGCAGCCTTC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGLGFT*FAEAAF
Trigger: GAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTTCAGCAGAGGTTGTaGCGTGGACGCTGGTTGGCC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLQQRL*RGRWLA
Trigger: GGCCAACCAGCGTCCACGTCACAACCTCTGCTGAAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATGGCGCCCAGGTCATaGTGTCTCTCATCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNMAPRS*CLSSVA
Trigger: CGCCACTGATGAGAGACAGCATGACCTGGGCGCCAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATTATGTGCACAGGCTaGAGCTCCATGGCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNIMCTG*SSMAPR
Trigger: CCTGGGCGCCATGGAGCTGCAGCCTGTGCACATAAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATACAAGTGTACGGGGATaGCCACTCTGGGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNTSVRG*PLWGTG
Trigger: TCCTGTGCCCCAGAGTGGGCATCCCCGTACACTTGT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCGGGCACAGGGCTGTaGTCAGGTTCTCTCATGGCT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPGTGL*SGSLMA
Trigger: AGCCATGAGAGAACCTGAGCACAGCCCTGTGCCCGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTGGGATCCATGGTCTaGTCAGGGCCCCTGGCAACA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLGSMV*SGPLAT
Trigger: TGTTGCCAGGGGCCCTGAGCAGACCATGGATCCCAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTCATCTTTAGTCTTAAAGGAGAAGTTACAGTAAGTGCAGTGGTAGGGGCGGACAGAAGTTACAGTAAGTaGAGTGGTAGGGGCGGACAT +
Preference number: 4 (lower is better)
Translates to: FIFSLKGEVTVSAVVGADRSYSK*SGRGGH
Trigger: ATGTCCGCCCCTACCACTGCACTTACTGTAACTTCT...GTCCGCCCCTACCACTGCACTTACTGTAACTTCTCCTTTAAGACTAAAGATGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCCTGAGGGGCGGGGCTaGTTTGTGATGAAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNPEGRG*FVMKGL
Trigger: CAAACCCTTCATCACAAAGCAGCCCCGCCCCTCAGG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCCTTGCATGGTCACCTaGAGGGGCAGGTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNPCMVT*RGRWIQ
Trigger: CTGAATCCACCTGCCCCTGCAGGTGACCATGCAAGG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCAGGCCATCAAGCCTTaGATGGTCACCTGCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNQAIKP*MVTCRG
Trigger: GCCCCTGCAGGTGACCATGCAAGGCTTGATGGCCTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAAGTGCACAGTGGGCTaGCTCCGCGGTAGTGCTGTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNKCTVG*LRGSAV
Trigger: CACAGCACTACCGCGGAGGCAGCCCACTGTGCACTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACACAGCTTGGGATCCATaGTCTGCTCAGGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNTAWDP*SAQGPW
Trigger: CCAGGGGCCCTGAGCAGACCATGGATCCCAAGCTGT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGATAGCTGTGTGCTCTaGTGGCTAGGCGGTGCATGG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNDSCVL*WLGGAW
Trigger: CCATGCACCGCCTAGCCACCAGAGCACACAGCTATC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGGCAGAACGTCCATTaGGTCCGTGTGTACCCCAGA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGQNVH*VRVYPR
Trigger: TCTGGGGTACACACGGACCCAATGGACGTTCTGCCC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGATCGTGAGCTGCACTaGTCCAGCCTGAAGGGGCAC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNDRELH*SSLKGH
Trigger: GTGCCCCTTCAGGCTGGACCAGTGCAGCTCACGATC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCAGAGCCAGTCCTGGTaGATGGACTTGTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNQSQSW*MDLWGH
Trigger: ATGGCCCCACAAGTCCATCCACCAGGACTGGCTCTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCCATCAAGCCTTGCATaGTCACCTGCAGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNPSSLA*SPAGAG
Trigger: ACCTGCCCCTGCAGGTGACCATGCAAGGCTTGATGG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCAGAGGTTGTGACGTaGACGCTGGTTGGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNAEVVT*TLVGPV
Trigger: TACAGGGCCAACCAGCGTCCACGTCACAACCTCTGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
3UTR CAA 72 bp TCAGCCTGGCTGTCCTCATCATCGTCTTCATTTTCATaGTCATCCTCATCTGGGCCATCAGATTCTTCAAGA +
Preference number: 4 (lower is better)
Translates to: SAWLSSSSSSFS*SSSSGPSDSSR
Trigger: TCTTGAAGAATCTGATGGCCCAGATGAGGATGACAATGAAAATGAAGACGATGATGAGGACAGCCAGGCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTCAGGCTTGTCAAATaGGTTGGGCCTGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLRLVK*VGPAQG
Trigger: TCCCTGAGCAGGCCCAACTCATTTGACAAGCCTGAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCCGTCCCGAGAAGGGTaGCTTTCCTCTTGGGAGATT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNPSREG*LSSWEI
Trigger: AATCTCCCAAGAGGAAAGTCACCCTTCTCGGGACGG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTCATCTTTAGTCTTAAAGGAGAAGTTACAGTAAGTGCAGTGGTAGGGGCGGACTCTCAGAATTTCTTCTaGCTCAGGGTAGTCCACAGA +
Preference number: 4 (lower is better)
Translates to: FIFSLKGEVTVSAVVGADSQNFF*LRVVHR
Trigger: TCTGTGGACTACCCTGAGTCAGAAGAAATTCTGAGA...GTCCGCCCCTACCACTGCACTTACTGTAACTTCTCCTTTAAGACTAAAGATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGGGTACTTAGGTTCTaGAGGCCTGGCACGCGGATT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGVLRF*RPGTRI
Trigger: AATCCGCGTGCCAGGCCTTCAGAACCTAAGTACCCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACACTGTAGGTAACCCCTaGGGAGACTCGGTCCTGCTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNTVGNP*GDSVLL
Trigger: CAGCAGGACCGAGTCTCCTCAGGGGTTACCTACAGT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGCCCTGTATGGAAGTaGGTTCAGGCTTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGPVWK*VQAWAS
Trigger: TGAAGCCCAAGCCTGAACTCACTTCCATACAGGGCC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATGGCGCCCAGGTCATaGTGTCTCTCATCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNMAPRS*CLSSVA
Trigger: CGCCACTGATGAGAGACAGCATGACCTGGGCGCCAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATTATGTGCACAGGCTaGAGCTCCATGGCGCCCAGG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNIMCTG*SSMAPR
Trigger: CCTGGGCGCCATGGAGCTGCAGCCTGTGCACATAAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCGTGGTGACAAGAGCTaGAGAGGGTCCGTTACTCCT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRGDKS*RGSVTP
Trigger: AGGAGTAACGGACCCTCTGCAGCTCTTGTCACCACG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACACAAGTGTACGGGGATaGCCACTCTGGGGCACAGGA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNTSVRG*PLWGTG
Trigger: TCCTGTGCCCCAGAGTGGGCATCCCCGTACACTTGT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTGGGATCCATGGTCTaGTCAGGGCCCCTGGCAACA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLGSMV*SGPLAT
Trigger: TGTTGCCAGGGGCCCTGAGCAGACCATGGATCCCAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCAGGAACACTACTCTaGAGGCGTATGGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNAGTLL*RRMGSM
Trigger: CATGCTGCCCATACGCCTGCAGAGTAGTGTTCCTGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTAGATGGAAGGTGCTaGGGGCTAGCTGTGACTGAG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLDGRC*GLAVTE
Trigger: CTCAGTCACAGCTAGCCCGCAGCACCTTCCATCTAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAACGAGGGGAGTGACTaGAAGCCTGGGGTACTTAGG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNNEGSD*KPGVLR
Trigger: CCTAAGTACCCCAGGCTTGCAGTCACTCCCCTCGTT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCTGAGGGGCGGGGCTaGTTTGTGATGAAGGGTTTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPEGRG*FVMKGL
Trigger: CAAACCCTTCATCACAAAGCAGCCCCGCCCCTCAGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCCTGCTGACCTGGTTTaGGCTGGCTACAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNPADLV*AGYRSL
Trigger: CAGACTTCTGTAGCCAGCGCAAACCAGGTCAGCAGG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCTTGCATGGTCACCTaGAGGGGCAGGTGGATTCAG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPCMVT*RGRWIQ
Trigger: CTGAATCCACCTGCCCCTGCAGGTGACCATGCAAGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGGCTTCACGTGATTTaGCGAGGCAGCCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGLHVI*RGSLLC
Trigger: ACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCTTTGGGGGACTCGTaGGACAAGAACAAGCCACCA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNALGDS*DKNKPP
Trigger: TGGTGGCTTGTTCTTGTCCCACGAGTCCCCCAAAGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCTGTCTCTCATCAGTaGCGCCTTCCTCCTCGCTCT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNAVSHQ*RLPPRS
Trigger: AGAGCGAGGAGGAAGGCGCCACTGATGAGAGACAGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGCTCCTCACTGACATaGCTTCACCAGCAGCATGGC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNCSSLT*LHQQHG
Trigger: GCCATGCTGCTGGTGAAGCCATGTCAGTGAGGAGCA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCTGCTCAGGGCCCCTaGCAACAAGGTGAATATGGG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSAQGP*QQGEYG
Trigger: CCCATATTCACCTTGTTGCCAGGGGCCCTGAGCAGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTGAGGCCCCTGATATaGCACTGCATTCACACTGGG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLRPLI*HCIHTG
Trigger: CCCAGTGTGAATGCAGTGCCATATCAGGGGCCTCAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGCTGTGTGCTCTGGTaGCTAGGCGGTGCATGGATT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSCVLW*LGGAWI
Trigger: AATCCATGCACCGCCTAGCCACCAGAGCACACAGCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGATAGCTGTGTGCTCTaGTGGCTAGGCGGTGCATGG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNDSCVL*WLGGAW
Trigger: CCATGCACCGCCTAGCCACCAGAGCACACAGCTATC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGGCAGAACGTCCATTaGGTCCGTGTGTACCCCAGA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGQNVH*VRVYPR
Trigger: TCTGGGGTACACACGGACCCAATGGACGTTCTGCCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCCTGGCACGCGGATTTaGCCGATAGGAATACATGGC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNPGTRI*PIGIHG
Trigger: GCCATGTATTCCTATCGGCCAAATCCGCGTGCCAGG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCAGAGCCAGTCCTGGTaGATGGACTTGTGGGGCCAT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNQSQSW*MDLWGH
Trigger: ATGGCCCCACAAGTCCATCCACCAGGACTGGCTCTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCAAGATCTGGAGACCTaGAATGTGTGCCTGAGGGGC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNQDLET*NVCLRG
Trigger: GCCCCTCAGGCACACATTCCAGGTCTCCAGATCTTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCGGTCCTGCTGACCTaGTTTGCGCTGGCTACAGAA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSVLLT*FALATE
Trigger: TTCTGTAGCCAGCGCAAACCAGGTCAGCAGGACCGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCATCAAGCCTTGCATaGTCACCTGCAGGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPSSLA*SPAGAG
Trigger: ACCTGCCCCTGCAGGTGACCATGCAAGGCTTGATGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGACGTGGACGCTGGTTaGCCCTGTATGGAAGTGAGT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNDVDAG*PCMEVS
Trigger: ACTCACTTCCATACAGGGCCAACCAGCGTCCACGTC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCAGAGGTTGTGACGTaGACGCTGGTTGGCCCTGTA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNAEVVT*TLVGPV
Trigger: TACAGGGCCAACCAGCGTCCACGTCACAACCTCTGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGGAACCTGTCTGTCTaGAGAGAGAGTCTGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGNLSV*RESLLA
Trigger: GGCCAGCAGACTCTCTCTCCAGACAGACAGGTTCCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGTTCATCGAGGTCACTaGATTTGGCAGGATCAGCGC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNVHRGH*IWQDQR
Trigger: GCGCTGATCCTGCCAAATTCAGTGACCTCGATGAAC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAAAGGTGGGCGCATCTaGCCTGGTAAAAGCAATGCC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNKGGRI*PGKSNA
Trigger: GGCATTGCTTTTACCAGGTCAGATGCGCCCACCTTT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTCAGGCTTGTCAAATaGGTTGGGCCTGCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLRLVK*VGPAQG
Trigger: TCCCTGAGCAGGCCCAACTCATTTGACAAGCCTGAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCGTCCCGAGAAGGGTaGCTTTCCTCTTGGGAGATT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPSREG*LSSWEI
Trigger: AATCTCCCAAGAGGAAAGTCACCCTTCTCGGGACGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCGCCTCATTTCCCGGTaGCATCCAGGAACATTCAGA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRLISR*HPGTFR
Trigger: TCTGAATGTTCCTGGATGTCACCGGGAAATGAGGCG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTGTCTGGGGTGGGGTaGTGCTTCCACAATCGAATG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLSGVG*CFHNRM
Trigger: CATTCGATTGTGGAAGCATCACCCCACCCCAGACAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGCGTATGGGCAGCATaGATGATGATGGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGVWAA*MMMAPS
Trigger: AGAAGGTGCCATCATCATTCATGCTGCCCATACGCC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGTCTGGCAAATTGGCTaGTTGGGCAGATCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNVWQIG*LGRSWV
Trigger: GACCCAAGATCTGCCCAATCAGCCAATTTGCCAGAC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCAAACGTGGAGTATGTaGGGCCAGCAGGTACCACAT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNQTWSM*GQQVPH
Trigger: ATGTGGTACCTGCTGGCCTCACATACTCCACGTTTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGTACCCAAAGTTCTGTaGACGACACTGACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNVPKVL*TTLTAG
Trigger: CCCTGCTGTCAGTGTCGTTCACAGAACTTTGGGTAC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCAACGGCTACTTGACTaGCTGAGGGGATTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNQRLLD*LRGLRW
Trigger: CCACCTTAATCCCCTCAGTCAGTCAAGTAGCCGTTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGCCCTGTATGGAAGTaGGTTCAGGCTTGGGCTTCA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGPVWK*VQAWAS
Trigger: TGAAGCCCAAGCCTGAACTCACTTCCATACAGGGCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCGTGGTGACAAGAGCTaGAGAGGGTCCGTTACTCCT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNRGDKS*RGSVTP
Trigger: AGGAGTAACGGACCCTCTGCAGCTCTTGTCACCACG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTATATGTGGGCCTTGTaGCAGTGCCTTGCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNYMWAL*QCLAPH
Trigger: GTGAGGAGCAAGGCACTGGCACAAGGCCCACATATA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATACTTGGATGTTGTGCTaGCGGACAAGTCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNTWMLC*RTSLEG
Trigger: GCCCTCAAGACTTGTCCGGCAGCACAACATCCAAGT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCCCTGCGTAGACACTTaGAGAGATAGCTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNPCVDT*RDSCVL
Trigger: GAGCACACAGCTATCTCTGCAAGTGTCTACGCAGGG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCAGGAACACTACTCTaGAGGCGTATGGGCAGCATG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNAGTLL*RRMGSM
Trigger: CATGCTGCCCATACGCCTGCAGAGTAGTGTTCCTGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTTCTAGATGGAAGGTaGTGCGGGCTAGCTGTGACT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLLDGR*CGLAVT
Trigger: AGTCACAGCTAGCCCGCAGCACCTTCCATCTAGAAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGTGTCCTCGATTGCTaGTGGGAATGCAAAGGAAGG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGVLDC*WECKGR
Trigger: CCTTCCTTTGCATTCCCAGCAGCAATCGAGGACACC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAACGAGGGGAGTGACTaGAAGCCTGGGGTACTTAGG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNNEGSD*KPGVLR
Trigger: CCTAAGTACCCCAGGCTTGCAGTCACTCCCCTCGTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGGTTGTGTCTCGCATaGTTTGCTTTGGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGLCLA*FALGSW
Trigger: CCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCTGCTGACCTGGTTTaGGCTGGCTACAGAAGTCTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPADLV*AGYRSL
Trigger: CAGACTTCTGTAGCCAGCGCAAACCAGGTCAGCAGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGGCTTCACGTGATTTaGCGAGGCAGCCTTCTCTGT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGLHVI*RGSLLC
Trigger: ACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCTTTGGGGGACTCGTaGGACAAGAACAAGCCACCA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNALGDS*DKNKPP
Trigger: TGGTGGCTTGTTCTTGTCCCACGAGTCCCCCAAAGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGGGACACAGTGACATaGTGGACCACAACTTTCGGT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGDTVT*WTTTFG
Trigger: ACCGAAAGTTGTGGTCCACCATGTCACTGTGTCCCC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCACCCTGGGACATGTTaGCTGAAAGTGGCTGTACGT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNHPGTC*LKVAVR
Trigger: ACGTACAGCCACTTTCAGCCAACATGTCCCAGGGTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTGGAGACTCCACCCTaGGACATGTTGGCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLETPP*DMLAES
Trigger: ACTTTCAGCCAACATGTCCCAGGGTGGAGTCTCCAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGCTGCCTTTGTAGCTaGGCGTGTACCGTTCCTACG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNCCLCS*ACTVPT
Trigger: CGTAGGAACGGTACACGCCCAGCTACAAAGGCAGCA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGCTGGGTAACCTTCTaGCAAAGGGAGTTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNCWVTF*QRELVD
Trigger: GTCCACCAACTCCCTTTGCCAGAAGGTTACCCAGCA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATGCCTTTTCCCCTGTaGGCAAAGCAGAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNMPFPL*AKQRVL
Trigger: CAACACCCTCTGCTTTGCCCACAGGGGAAAAGGCAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCTGCTCAGGGCCCCTaGCAACAAGGTGAATATGGG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSAQGP*QQGEYG
Trigger: CCCATATTCACCTTGTTGCCAGGGGCCCTGAGCAGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCTTGTCAAATGAGTTaGGCCTGCTCAGGGAGTTGG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNACQMS*ACSGSW
Trigger: CCAACTCCCTGAGCAGGCCCAACTCATTTGACAAGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGGTGTTGTCTGGGGTaGGGTGATGCTTCCACAATC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNWCCLG*GDASTI
Trigger: GATTGTGGAAGCATCACCCCACCCCAGACAACACCA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGTAAGTGGTGTTGTCTaGGGTGGGGTGATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNVSGVV*GGVMLP
Trigger: TGGAAGCATCACCCCACCCCAGACAACACCACTTAC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTGAGGCCCCTGATATaGCACTGCATTCACACTGGG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLRPLI*HCIHTG
Trigger: CCCAGTGTGAATGCAGTGCCATATCAGGGGCCTCAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGCTGTGTGCTCTGGTaGCTAGGCGGTGCATGGATT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSCVLW*LGGAWI
Trigger: AATCCATGCACCGCCTAGCCACCAGAGCACACAGCT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAAGGCTACTTCTAGATaGAAGGTGCTGCGGGCTAGC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNKATSR*KVLRAS
Trigger: GCTAGCCCGCAGCACCTTCCATCTAGAAGTAGCCTT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGATGACACGGGGACCTaGAAGTGTCTACAGACGGAA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNDDTGT*KCLQTE
Trigger: TTCCGTCTGTAGACACTTCCAGGTCCCCGTGTCATC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGTCCTCGATTGCTGCTaGGAATGCAAAGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNVLDCC*ECKGRW
Trigger: CCACCTTCCTTTGCATTCCCAGCAGCAATCGAGGAC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCTGGCACGCGGATTTaGCCGATAGGAATACATGGC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPGTRI*PIGIHG
Trigger: GCCATGTATTCCTATCGGCCAAATCCGCGTGCCAGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCCAGTCCTGGTGGATaGACTTGTGGGGCCATATTT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNASPGG*TCGAIF
Trigger: AAATATGGCCCCACAAGTCCATCCACCAGGACTGGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATTCAGAGCCAGTCCTaGTGGATGGACTTGTGGGGC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNIQSQS*WMDLWG
Trigger: GCCCCACAAGTCCATCCACCAGGACTGGCTCTGAAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGAAGCTGGCATTTCTaGAGCTCCCTGTGCATCAAC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGSWHF*SSLCIN
Trigger: GTTGATGCACAGGGAGCTCCAGAAATGCCAGCTTCC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCGGTCCTGCTGACCTaGTTTGCGCTGGCTACAGAA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSVLLT*FALATE
Trigger: TTCTGTAGCCAGCGCAAACCAGGTCAGCAGGACCGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGACTCCGAAGCACTATaGAGAACGGCGAAAGATGAC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNDSEAL*RTAKDD
Trigger: GTCATCTTTCGCCGTTCTTCATAGTGCTTCGGAGTC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGTTCATCGAGGTCACTaGATTTGGCAGGATCAGCGC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNVHRGH*IWQDQR
Trigger: GCGCTGATCCTGCCAAATTCAGTGACCTCGATGAAC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTGTCAGTGATCCTGTaGAACCTGAACACCCCGGAA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLSVIL*NLNTPE
Trigger: TTCCGGGGTGTTCAGGTTTCACAGGATCACTGACAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTCTGTCACAGCTTGTaGTTCTGCAGATCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLCHSL*FCRSVL
Trigger: CAGGACAGATCTGCAGAATCACAAGCTGTGACAGAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTGGGACATGTTGGCTaGAAGTGGCTGTACGTTTGT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLGHVG*KWLYVC
Trigger: ACAAACGTACAGCCACTTTCAGCCAACATGTCCCAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGTGGACTCACTGTTTaGTCGGCACTTTCAGAACGT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGGLTV*SALSER
Trigger: ACGTTCTGAAAGTGCCGATCAAACAGTGAGTCCACC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAAAGGTGGGCGCATCTaGCCTGGTAAAAGCAATGCC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNKGGRI*PGKSNA
Trigger: GGCATTGCTTTTACCAGGTCAGATGCGCCCACCTTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCGGTATATCAGAGCTTaGACTTGTTCTCCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRYIRA*TCSPSH
Trigger: GTGGGACGGAGAACAAGTTCAAGCTCTGATATACCG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCCCCTGGCAACAAGGTaGATATGGGAGTTTTGCAAC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNPLATR*IWEFCN
Trigger: GTTGCAAAACTCCCATATTCACCTTGTTGCCAGGGG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGTTGGTGTGCTGGATaGCAGAGATTCCAGTTCCGT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSWCAG*QRFQFR
Trigger: ACGGAACTGGAATCTCTGTCATCCAGCACACCAACT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCCTGAAGTTCTCCTCTaGGAGCGTCTGATAGTGCAA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNPEVLL*ERLIVQ
Trigger: TTGCACTATCAGACGCTCTCAGAGGAGAACTTCAGG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTTCTGGAGCTTTCCTaGAGTTCTCCTCTGAGAGCG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNFLELS*SSPLRA
Trigger: CGCTCTCAGAGGAGAACTTCAGGAAAGCTCCAGAAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCGCCTCATTTCCCGGTaGCATCCAGGAACATTCAGA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNRLISR*HPGTFR
Trigger: TCTGAATGTTCCTGGATGTCACCGGGAAATGAGGCG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTGTCTGGGGTGGGGTaGTGCTTCCACAATCGAATG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLSGVG*CFHNRM
Trigger: CATTCGATTGTGGAAGCATCACCCCACCCCAGACAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGTAGAGCTGGAGTTTaGTGTTTCTGCCTGCAGATC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGRAGV*CFCLQI
Trigger: GATCTGCAGGCAGAAACATCAAACTCCAGCTCTACC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGCGTATGGGCAGCATaGATGATGATGGCACCTTCT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGVWAA*MMMAPS
Trigger: AGAAGGTGCCATCATCATTCATGCTGCCCATACGCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGTCTGGCAAATTGGCTaGTTGGGCAGATCTTGGGTC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNVWQIG*LGRSWV
Trigger: GACCCAAGATCTGCCCAATCAGCCAATTTGCCAGAC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGTACTCACAGGGTCCTaGAGGCTACTTCTAGATGGA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNVLTGS*RLLLDG
Trigger: TCCATCTAGAAGTAGCCTTCAGGACCCTGTGAGTAC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGTACCCAAAGTTCTGTaGACGACACTGACAGCAGGG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNVPKVL*TTLTAG
Trigger: CCCTGCTGTCAGTGTCGTTCACAGAACTTTGGGTAC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCAACGGCTACTTGACTaGCTGAGGGGATTAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNQRLLD*LRGLRW
Trigger: CCACCTTAATCCCCTCAGTCAGTCAAGTAGCCGTTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCATCAACGGCTACTTaGCTGACTGAGGGGATTAAG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNASTAT*LTEGIK
Trigger: CTTAATCCCCTCAGTCAGTCAAGTAGCCGTTGATGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGAGAGTCTGCTGGCCTaGGGGCTTTGTAAAAACTTC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNESLLA*GLCKNF
Trigger: GAAGTTTTTACAAAGCCCTCAGGCCAGCAGACTCTC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCCACCAGCATCTGGTTaGAAGACAAGACCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNPPASG*KTRPSL
Trigger: CAAACTGGGTCTTGTCTTGCAACCAGATGCTGGTGG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTATATGTGGGCCTTGTaGCAGTGCCTTGCTCCTCAC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNYMWAL*QCLAPH
Trigger: GTGAGGAGCAAGGCACTGGCACAAGGCCCACATATA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCCAGTTCCGTGTCTCTaGAGTTCTATCTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNPVPCL*SSILSW
Trigger: CCAGGACAAGATAGAACTGCAGAGACACGGAACTGG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTCAGGGAGTTGGTGTaGTGGATGACAGAGATTCCA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLRELV*WMTEIP
Trigger: TGGAATCTCTGTCATCCAGCACACCAACTCCCTGAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACACTTGGATGTTGTGCTaGCGGACAAGTCTTGAGGGC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNTWMLC*RTSLEG
Trigger: GCCCTCAAGACTTGTCCGGCAGCACAACATCCAAGT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGAACTTGGATGTTGTaGTGCCGGACAAGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGTWML*CRTSLE
Trigger: CTCAAGACTTGTCCGGCAGCACAACATCCAAGTTCC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCTAAGAGAGGCACATaGCCAGTCACTCCCACTCGA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSKRGT*PVTPTR
Trigger: TCGAGTGGGAGTGACTGGGCATGTGCCTCTCTTAGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCCTGCGTAGACACTTaGAGAGATAGCTGTGTGCTC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPCVDT*RDSCVL
Trigger: GAGCACACAGCTATCTCTGCAAGTGTCTACGCAGGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCTGGCTTGCTACCCTaGGTAGACACTTGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSGLLP*VDTCRD
Trigger: ATCTCTGCAAGTGTCTACGCAGGGTAGCAAGCCAGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTGGCCCGCTTCTGGTaGTTTTCCATGGCAATGTCT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLARFW*FSMAMS
Trigger: AGACATTGCCATGGAAAAGCACCAGAAGCGGGCCAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTAGGGAAAGCCAGCTaGTGGGTGTCCTTGATGTTA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLGKAS*WVSLML
Trigger: TAACATCAAGGACACCCAGCAGCTGGCTTTCCCTAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTTCTAGATGGAAGGTaGTGCGGGCTAGCTGTGACT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLLDGR*CGLAVT
Trigger: AGTCACAGCTAGCCCGCAGCACCTTCCATCTAGAAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGGTTGTGTCTCGCATaGTTTGCTTTGGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGLCLA*FALGSW
Trigger: CCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTGGCTACAGAAGTCTaGTTGGGTTGTGTCTCGCAT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLATEV*LGCVSH
Trigger: ATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGTCGCTCTCCAGTGTaGGAGCGGATATGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGRSPV*ERICFK
Trigger: TTTAAAGCATATCCGCTCCCACACTGGAGAGCGACC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCAAGCCACCAGCATCTaGTTGCAAGACAAGACCCAG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNQATSI*LQDKTQ
Trigger: CTGGGTCTTGTCTTGCAACCAGATGCTGGTGGCTTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCAGGCTTGGGATCCATaGCCTTTGGACTGTCAGTTC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNQAWDP*PLDCQF
Trigger: GAACTGACAGTCCAAAGGCCATGGATCCCAAGCCTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCACCCTGGGACATGTTaGCTGAAAGTGGCTGTACGT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNHPGTC*LKVAVR
Trigger: ACGTACAGCCACTTTCAGCCAACATGTCCCAGGGTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTGGAGACTCCACCCTaGGACATGTTGGCTGAAAGT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLETPP*DMLAES
Trigger: ACTTTCAGCCAACATGTCCCAGGGTGGAGTCTCCAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGCAAAGGGAGTTGGTaGACTCACTGTTTGATCGGC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGKGSW*THCLIG
Trigger: GCCGATCAAACAGTGAGTCCACCAACTCCCTTTGCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGCTGGGTAACCTTCTaGCAAAGGGAGTTGGTGGAC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNCWVTF*QRELVD
Trigger: GTCCACCAACTCCCTTTGCCAGAAGGTTACCCAGCA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATGCCTTTTCCCCTGTaGGCAAAGCAGAGGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNMPFPL*AKQRVL
Trigger: CAACACCCTCTGCTTTGCCCACAGGGGAAAAGGCAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGGTGTTGTCTGGGGTaGGGTGATGCTTCCACAATC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNWCCLG*GDASTI
Trigger: GATTGTGGAAGCATCACCCCACCCCAGACAACACCA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGTAAGTGGTGTTGTCTaGGGTGGGGTGATGCTTCCA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNVSGVV*GGVMLP
Trigger: TGGAAGCATCACCCCACCCCAGACAACACCACTTAC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCTTTGGCCCGCTTCTaGTGCTTTTCCATGGCAATG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSLARF*CFSMAM
Trigger: CATTGCCATGGAAAAGCACCAGAAGCGGGCCAAAGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGGAAAGCCAGCTGCTaGGTGTCCTTGATGTTAAAC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGKASC*VSLMLN
Trigger: GTTTAACATCAAGGACACCCAGCAGCTGGCTTTCCC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGTGGGCAAACCGAGTaGATTTGGATTACTGGCGCT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNCGQTE*IWITGA
Trigger: AGCGCCAGTAATCCAAATCCACTCGGTTTGCCCACA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGGACTGATTCAGCCTaGCTGTCCTCATCATCGTCT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRTDSA*LSSSSS
Trigger: AGACGATGATGAGGACAGCCAGGCTGAATCAGTCCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAAGGCTACTTCTAGATaGAAGGTGCTGCGGGCTAGC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNKATSR*KVLRAS
Trigger: GCTAGCCCGCAGCACCTTCCATCTAGAAGTAGCCTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGTCCTCGATTGCTGCTaGGAATGCAAAGGAAGGTGG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNVLDCC*ECKGRW
Trigger: CCACCTTCCTTTGCATTCCCAGCAGCAATCGAGGAC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCCAGTCCTGGTGGATaGACTTGTGGGGCCATATTT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNASPGG*TCGAIF
Trigger: AAATATGGCCCCACAAGTCCATCCACCAGGACTGGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTTGCTTTGGGAAGCTaGCATTTCTGGAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNFALGS*HFWSSL
Trigger: CAGGGAGCTCCAGAAATGCCAGCTTCCCAAAGCAAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGAGAGAGAGTCTGCTaGCCTGAGGGCTTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGERVC*PEGFVK
Trigger: TTTTACAAAGCCCTCAGGCCAGCAGACTCTCTCTCC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGATCCCTCCTTCACTTaGCAACCCCAAACACAAACA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNDPSFT*QPQTQT
Trigger: TGTTTGTGTTTGGGGTTGTCAAGTGAAGGAGGGATC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGACTCCGAAGCACTATaGAGAACGGCGAAAGATGAC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNDSEAL*RTAKDD
Trigger: GTCATCTTTCGCCGTTCTTCATAGTGCTTCGGAGTC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGACGTAGTGCCACAATaGGAAGAGATGCATTCGCTA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNDVVPQ*EEMHSL
Trigger: TAGCGAATGCATCTCTTCTCATTGTGGCACTACGTC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGCAACCAATTCCTGTaGAGTCTGATTTGGGGCATC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSNQFL*SLIWGI
Trigger: GATGCCCCAAATCAGACTTCACAGGAATTGGTTGCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATACAAATGAGAAGCTaGCTGCATTGCCCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNIQMRS*LHCPLL
Trigger: GAGCAAGGGGCAATGCAGTCAGCTTCTCATTTGTAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCACCCCGGAAGCTGTTaGTTATGTTGGTTGGATTTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNHPGSC*LCWLDL
Trigger: CAAATCCAACCAACATAATCAACAGCTTCCGGGGTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTGTCAGTGATCCTGTaGAACCTGAACACCCCGGAA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLSVIL*NLNTPE
Trigger: TTCCGGGGTGTTCAGGTTTCACAGGATCACTGACAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTCTGTCACAGCTTGTaGTTCTGCAGATCTGTCCTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLCHSL*FCRSVL
Trigger: CAGGACAGATCTGCAGAATCACAAGCTGTGACAGAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTGGGACATGTTGGCTaGAAGTGGCTGTACGTTTGT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLGHVG*KWLYVC
Trigger: ACAAACGTACAGCCACTTTCAGCCAACATGTCCCAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGTACCGTTCCTACGTaGGAGTCTTGCTTTCCTTCC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNCTVPT*ESCFPS
Trigger: GGAAGGAAAGCAAGACTCTCACGTAGGAACGGTACA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGTGGACTCACTGTTTaGTCGGCACTTTCAGAACGT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGGLTV*SALSER
Trigger: ACGTTCTGAAAGTGCCGATCAAACAGTGAGTCCACC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCGGTATATCAGAGCTTaGACTTGTTCTCCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNRYIRA*TCSPSH
Trigger: GTGGGACGGAGAACAAGTTCAAGCTCTGATATACCG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGTAGGGGTGAAAGGTaGCTTCGGTATATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSRGER*LRYIRA
Trigger: AGCTCTGATATACCGAAGTCACCTTTCACCCCTACT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATTTGCAGGTACTGCTaGATAACCTGTGGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNICRYC*ITCGRH
Trigger: ATGCCGACCACAGGTTATTCAGCAGTACCTGCAAAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCCCTGGCAACAAGGTaGATATGGGAGTTTTGCAAC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPLATR*IWEFCN
Trigger: GTTGCAAAACTCCCATATTCACCTTGTTGCCAGGGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTTGTCCTGGGCTGCTaGACTTATCTGTTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLVLGC*TYLLFH
Trigger: ATGGAACAACAGATAAGTTCAGCAGCCCAGGACAAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGTTGGTGTGCTGGATaGCAGAGATTCCAGTTCCGT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSWCAG*QRFQFR
Trigger: ACGGAACTGGAATCTCTGTCATCCAGCACACCAACT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCTGAAGTTCTCCTCTaGGAGCGTCTGATAGTGCAA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPEVLL*ERLIVQ
Trigger: TTGCACTATCAGACGCTCTCAGAGGAGAACTTCAGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTTCTGGAGCTTTCCTaGAGTTCTCCTCTGAGAGCG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNFLELS*SSPLRA
Trigger: CGCTCTCAGAGGAGAACTTCAGGAAAGCTCCAGAAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTACGCTGGGGCCAACTaGACTTCTCTGACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNYAGAN*TSLTFL
Trigger: AAGAAAAGTCAGAGAAGTTCAGTTGGCCCCAGCGTA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGTAGAGCTGGAGTTTaGTGTTTCTGCCTGCAGATC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGRAGV*CFCLQI
Trigger: GATCTGCAGGCAGAAACATCAAACTCCAGCTCTACC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGAGCAAGATGGGCCTaGAGTGAAAACCTGACAATG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRARWA*SENLTM
Trigger: CATTGTCAGGTTTTCACTTCAGGCCCATCTTGCTCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCTGAAGATTCTTGTTaGGGGGAAAGTCGACCAACA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNAEDSC*GESRPT
Trigger: TGTTGGTCGACTTTCCCCTCAACAAGAATCTTCAGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGTTTTCTGGTCCTTCTaGGGCAAATGCAACGACTTC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNVFWSF*GKCNDF
Trigger: GAAGTCGTTGCATTTGCCTCAGAAGGACCAGAAAAC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGTACTCACAGGGTCCTaGAGGCTACTTCTAGATGGA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNVLTGS*RLLLDG
Trigger: TCCATCTAGAAGTAGCCTTCAGGACCCTGTGAGTAC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGCCAGACACTTCTGTaGCCGTATTCCTATGAGTAC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNCQTLL*PYSYEY
Trigger: GTACTCATAGGAATACGGTCACAGAAGTGTCTGGCA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCATCAACGGCTACTTaGCTGACTGAGGGGATTAAG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNASTAT*LTEGIK
Trigger: CTTAATCCCCTCAGTCAGTCAAGTAGCCGTTGATGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCGCAGTTCAGATGGTTaGTGCAGAAACAAGGGCTTC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNRSSDG*CRNKGF
Trigger: GAAGCCCTTGTTTCTGCAGCAACCATCTGAACTGCG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCCTTTTGTGACAAGGTaGTCAGTTCTGGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNPFVTR*SVLAPL
Trigger: CAATGGAGCCAGAACTGAGCACCTTGTCACAAAAGG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTTGGGAGGGGAACGTaGAGTTTTATTTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNFGRGT*SFIWPQ
Trigger: CTGAGGCCAAATAAAACTGCACGTTCCCCTCCCAAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGTGTGGGAGCGGATATaGTTTAAAAGCACACTAGGC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNVWERI*FKSTLG
Trigger: GCCTAGTGTGCTTTTAAAGCATATCCGCTCCCACAC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCACCAGCATCTGGTTaGAAGACAAGACCCAGTTTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPPASG*KTRPSL
Trigger: CAAACTGGGTCTTGTCTTGCAACCAGATGCTGGTGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCAGAGTCTTGTTCTGTaGTGGGTAACCTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNQSLVL*WVTFWQ
Trigger: TTGCCAGAAGGTTACCCAGCACAGAACAAGACTCTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCAGTTCCGTGTCTCTaGAGTTCTATCTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPVPCL*SSILSW
Trigger: CCAGGACAAGATAGAACTGCAGAGACACGGAACTGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTCAGGGAGTTGGTGTaGTGGATGACAGAGATTCCA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLRELV*WMTEIP
Trigger: TGGAATCTCTGTCATCCAGCACACCAACTCCCTGAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGAACTTGGATGTTGTaGTGCCGGACAAGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGTWML*CRTSLE
Trigger: CTCAAGACTTGTCCGGCAGCACAACATCCAAGTTCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCTGGCTTGCTACCCTaGGTAGACACTTGCAGAGAT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSGLLP*VDTCRD
Trigger: ATCTCTGCAAGTGTCTACGCAGGGTAGCAAGCCAGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTGGCCCGCTTCTGGTaGTTTTCCATGGCAATGTCT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLARFW*FSMAMS
Trigger: AGACATTGCCATGGAAAAGCACCAGAAGCGGGCCAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTAGGGAAAGCCAGCTaGTGGGTGTCCTTGATGTTA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLGKAS*WVSLML
Trigger: TAACATCAAGGACACCCAGCAGCTGGCTTTCCCTAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGAAGTTACAGTAAGTaGAGTGGTAGGGGCGGACAT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRSYSK*SGRGGH
Trigger: ATGTCCGCCCCTACCACTGCACTTACTGTAACTTCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTTGCAGTCAGAACCTaGAGTCCGACAGCATTCAGA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNFAVRT*SPTAFR
Trigger: TCTGAATGCTGTCGGACTGCAGGTTCTGACTGCAAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTCTGGAGCTCCCTGTaGATCAACGGCTACTTGACT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNFWSSL*INGYLT
Trigger: AGTCAAGTAGCCGTTGATGCACAGGGAGCTCCAGAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGTGTCTCGCATGCTTTaGTTTGGGAAGCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNVSRML*FGKLAF
Trigger: AAATGCCAGCTTCCCAAAGCAAAGCATGCGAGACAC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTGGCTACAGAAGTCTaGTTGGGTTGTGTCTCGCAT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLATEV*LGCVSH
Trigger: ATGCGAGACACAACCCAAGCAGACTTCTGTAGCCAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCTACGCAGTTCAGATaGTTGCTGCAGAAACAAGGG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSTQFR*LLQKQG
Trigger: CCCTTGTTTCTGCAGCAACCATCTGAACTGCGTAGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGTCGCTCTCCAGTGTaGGAGCGGATATGCTTTAAA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGRSPV*ERICFK
Trigger: TTTAAAGCATATCCGCTCCCACACTGGAGAGCGACC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGACACAGTGACATGGTaGACCACAACTTTCGGTAAC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNDTVTW*TTTFGN
Trigger: GTTACCGAAAGTTGTGGTCCACCATGTCACTGTGTC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCTGGCAAAGGGAGTTaGTGGACTCACTGTTTGATC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSGKGS*WTHCLI
Trigger: GATCAAACAGTGAGTCCACCAACTCCCTTTGCCAGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGTCTTGTTCTGTGCTaGGTAACCTTCTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSLVLC*VTFWQR
Trigger: CCTTTGCCAGAAGGTTACCCAGCACAGAACAAGACT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTCCTTTTTCTTATCTaGGGCGTCTGTTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLLFLI*GVCSQM
Trigger: CATCTGGGAACAGACGCCCCAGATAAGAAAAAGGAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGGGAGTTGGTGTGCTaGATGACAGAGATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRELVC*MTEIPV
Trigger: AACTGGAATCTCTGTCATCCAGCACACCAACTCCCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTCCTGGAAAGAAACTaGGGAGGCTCTTTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLLERN*GGSFKR
Trigger: CCTTTTGAAAGAGCCTCCCCAGTTTCTTTCCAGGAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGTTCTATTCAGCTCCTaGAAAGAAACTGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNVLFSS*KETGEA
Trigger: AGCCTCCCCAGTTTCTTTCCAGGAGCTGAATAGAAC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAAGGTTTCACTACGCTaGGGCCAACTGAACTTCTCT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNKVSLR*GQLNFS
Trigger: AGAGAAGTTCAGTTGGCCCCAGCGTAGTGAAACCTT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCTTTGGCCCGCTTCTaGTGCTTTTCCATGGCAATG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSLARF*CFSMAM
Trigger: CATTGCCATGGAAAAGCACCAGAAGCGGGCCAAAGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGGAAAGCCAGCTGCTaGGTGTCCTTGATGTTAAAC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGKASC*VSLMLN
Trigger: GTTTAACATCAAGGACACCCAGCAGCTGGCTTTCCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGTGGGCAAACCGAGTaGATTTGGATTACTGGCGCT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNCGQTE*IWITGA
Trigger: AGCGCCAGTAATCCAAATCCACTCGGTTTGCCCACA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGGACTGATTCAGCCTaGCTGTCCTCATCATCGTCT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNRTDSA*LSSSSS
Trigger: AGACGATGATGAGGACAGCCAGGCTGAATCAGTCCT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCTATGTTCAAGATCTaGAGACCTGGAATGTGTGCC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNAMFKI*RPGMCA
Trigger: GGCACACATTCCAGGTCTCCAGATCTTGAACATAGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTTGCTTTGGGAAGCTaGCATTTCTGGAGCTCCCTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNFALGS*HFWSSL
Trigger: CAGGGAGCTCCAGAAATGCCAGCTTCCCAAAGCAAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTACAGAAGTCTGCTTaGGTTGTGTCTCGCATGCTT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLQKSA*VVSRML
Trigger: AAGCATGCGAGACACAACCCAAGCAGACTTCTGTAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGAGAGAGAGTCTGCTaGCCTGAGGGCTTTGTAAAA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGERVC*PEGFVK
Trigger: TTTTACAAAGCCCTCAGGCCAGCAGACTCTCTCTCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGATCCCTCCTTCACTTaGCAACCCCAAACACAAACA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNDPSFT*QPQTQT
Trigger: TGTTTGTGTTTGGGGTTGTCAAGTGAAGGAGGGATC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGACGTAGTGCCACAATaGGAAGAGATGCATTCGCTA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNDVVPQ*EEMHSL
Trigger: TAGCGAATGCATCTCTTCTCATTGTGGCACTACGTC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGCAACCAATTCCTGTaGAGTCTGATTTGGGGCATC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSNQFL*SLIWGI
Trigger: GATGCCCCAAATCAGACTTCACAGGAATTGGTTGCT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGTACAAGAAGACTGTaGTTCAGCAACCAATTCCTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGTRRL*FSNQFL
Trigger: CAGGAATTGGTTGCTGAATCACAGTCTTCTTGTACC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCACCCCGGAAGCTGTTaGTTATGTTGGTTGGATTTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNHPGSC*LCWLDL
Trigger: CAAATCCAACCAACATAATCAACAGCTTCCGGGGTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGTAGGGGTGAAAGGTaGCTTCGGTATATCAGAGCT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSRGER*LRYIRA
Trigger: AGCTCTGATATACCGAAGTCACCTTTCACCCCTACT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATTTGCAGGTACTGCTaGATAACCTGTGGTCGGCAT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNICRYC*ITCGRH
Trigger: ATGCCGACCACAGGTTATTCAGCAGTACCTGCAAAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTATCTGTTGTTCCATaGTGGTCGACAGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLSVVP*WSTAWD
Trigger: ATCCCAAGCTGTCGACCATCATGGAACAACAGATAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTTGTCCTGGGCTGCTaGACTTATCTGTTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLVLGC*TYLLFH
Trigger: ATGGAACAACAGATAAGTTCAGCAGCCCAGGACAAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTACGCTGGGGCCAACTaGACTTCTCTGACTTTTCTT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNYAGAN*TSLTFL
Trigger: AAGAAAAGTCAGAGAAGTTCAGTTGGCCCCAGCGTA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTCTGTTGGCAATTTTaGCAAGGTTTCACTACGCTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLCWQF*QGFTTL
Trigger: CAGCGTAGTGAAACCTTGTCAAAATTGCCAACAGAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCGAATGATTTGCTTCTaGGATCAGAGACCTCCATTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRMICF*DQRPPL
Trigger: CAATGGAGGTCTCTGATCTCAGAAGCAAATCATTCG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCTGAAGATTCTTGTTaGGGGGAAAGTCGACCAACA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNAEDSC*GESRPT
Trigger: TGTTGGTCGACTTTCCCCTCAACAAGAATCTTCAGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCCTTTTACTCGAAGCTaGAGATTCTTGTTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNPFTRS*RFLLRG
Trigger: TCCCCTCAACAAGAATCTTCAGCTTCGAGTAAAAGG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGTTTTCTGGTCCTTCTaGGGCAAATGCAACGACTTC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNVFWSF*GKCNDF
Trigger: GAAGTCGTTGCATTTGCCTCAGAAGGACCAGAAAAC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCCAATCAGTATAGGCTaGAGTTTTCTGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNPISIG*SFLVLL
Trigger: CAGAAGGACCAGAAAACTTCAGCCTATACTGATTGG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGGAAGTCTTACAGATaGTGGGCTCTGTGTTATAGC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRKSYR*WALCYS
Trigger: GCTATAACACAGAGCCCATCATCTGTAAGACTTCCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGCCAGACACTTCTGTaGCCGTATTCCTATGAGTAC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNCQTLL*PYSYEY
Trigger: GTACTCATAGGAATACGGTCACAGAAGTGTCTGGCA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTAGGCCTACAATATTaGCGGTTTCCATGCTTAACG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLGLQY*RFPCLT
Trigger: CGTTAAGCATGGAAACCGTCAATATTGTAGGCCTAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCTTTTGTGACAAGGTaGTCAGTTCTGGCTCCATTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPFVTR*SVLAPL
Trigger: CAATGGAGCCAGAACTGAGCACCTTGTCACAAAAGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTTGGGAGGGGAACGTaGAGTTTTATTTGGCCTCAG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNFGRGT*SFIWPQ
Trigger: CTGAGGCCAAATAAAACTGCACGTTCCCCTCCCAAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGTGTGGGAGCGGATATaGTTTAAAAGCACACTAGGC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNVWERI*FKSTLG
Trigger: GCCTAGTGTGCTTTTAAAGCATATCCGCTCCCACAC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCAGAGTCTTGTTCTGTaGTGGGTAACCTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNQSLVL*WVTFWQ
Trigger: TTGCCAGAAGGTTACCCAGCACAGAACAAGACTCTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATTTGGGGGAATCAATaGTTCCTCGTCTTGACAGTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNIWGNQ*FLVLTV
Trigger: CACTGTCAAGACGAGGAAGCATTGATTCCCCCAAAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGAGTCTTCTATGGCTaGTTGTCTCACAAGTGTACG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRVFYG*LSHKCT
Trigger: CGTACACTTGTGAGACAAGCAGCCATAGAAGACTCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGTGAAGATGGAGGCTaGAATTCAGTAAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGEDGG*NSVSGV
Trigger: AACACCACTTACTGAATTGCAGCCTCCATCTTCACC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGGTCTCACGTCTGTTaGACAAACAGCTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRSHVC*TNSSIF
Trigger: GAAAATGGAGCTGTTTGTGCAACAGACGTGAGACCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGAAGTTACAGTAAGTaGAGTGGTAGGGGCGGACAT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNRSYSK*SGRGGH
Trigger: ATGTCCGCCCCTACCACTGCACTTACTGTAACTTCT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGTGTCTCGCATGCTTTaGTTTGGGAAGCTGGCATTT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNVSRML*FGKLAF
Trigger: AAATGCCAGCTTCCCAAAGCAAAGCATGCGAGACAC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AACATTCATTCTATGTGCCTGTTACTCTGCCAGGTATATTATATAAAGTGTCCACCAGAAGTTTGGGGTTaGAGTGAGCTACAACTACAC +
Preference number: 4 (lower is better)
Translates to: NIHSMCLLLCQVYYIKCPPEVWG*SELQLH
Trigger: GTGTAGTTGTAGCTCACTGCAACCCCAAACTTCTGG...TGGACACTTTATATAATATACCTGGCAGAGTAACAGGCACATAGAATGAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484210.1
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCTACGCAGTTCAGATaGTTGCTGCAGAAACAAGGG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSTQFR*LLQKQG
Trigger: CCCTTGTTTCTGCAGCAACCATCTGAACTGCGTAGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGACACAGTGACATGGTaGACCACAACTTTCGGTAAC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNDTVTW*TTTFGN
Trigger: GTTACCGAAAGTTGTGGTCCACCATGTCACTGTGTC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATGTCGCCTTTCTGGTaGGAATTCTCATTAGTCTCC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNMSPFW*EFSLVS
Trigger: GGAGACTAATGAGAATTCCCACCAGAAAGGCGACAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTGCTTTCCTTCCAGTaGATTCATGTCGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLLSFQ*IHVAFL
Trigger: CAGAAAGGCGACATGAATCCACTGGAAGGAAAGCAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGTCTTGTTCTGTGCTaGGTAACCTTCTGGCAAAGG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSLVLC*VTFWQR
Trigger: CCTTTGCCAGAAGGTTACCCAGCACAGAACAAGACT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTGCTGAATAACCTGTaGTCGGCATGGAATTACTTC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLLNNL*SAWNYF
Trigger: GAAGTAATTCCATGCCGACCACAGGTTATTCAGCAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCTCAGGTTCTCTCATaGCTACCTTTGTTTTTGGTC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNAQVLS*LPLFLV
Trigger: GACCAAAAACAAAGGTAGCCATGAGAGAACCTGAGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTCCTTTTTCTTATCTaGGGCGTCTGTTCCCAGATG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLLFLI*GVCSQM
Trigger: CATCTGGGAACAGACGCCCCAGATAAGAAAAAGGAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGGGAGTTGGTGTGCTaGATGACAGAGATTCCAGTT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNRELVC*MTEIPV
Trigger: AACTGGAATCTCTGTCATCCAGCACACCAACTCCCT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTCCTGGAAAGAAACTaGGGAGGCTCTTTCAAAAGG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLLERN*GGSFKR
Trigger: CCTTTTGAAAGAGCCTCCCCAGTTTCTTTCCAGGAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGTTCTATTCAGCTCCTaGAAAGAAACTGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNVLFSS*KETGEA
Trigger: AGCCTCCCCAGTTTCTTTCCAGGAGCTGAATAGAAC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCACATGTCGTTCACTTaGACTCTTTCTGGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNHMSFT*TLSGAF
Trigger: GAAAGCTCCAGAAAGAGTCCAAGTGAACGACATGTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAAAATCTCTGGAACTTaGATGTTGTGCTGCCGGACA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNKISGT*MLCCRT
Trigger: TGTCCGGCAGCACAACATCCAAGTTCCAGAGATTTT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGACTCCTGGAGAGAGTaGAATCAAAGCTCGATTCTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNDSWRE*NQSSIL
Trigger: CAGAATCGAGCTTTGATTCCACTCTCTCCAGGAGTC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCCTACTTAGACTCCTaGAGAGAGTGGAATCAAAGC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPYLDS*REWNQS
Trigger: GCTTTGATTCCACTCTCTCCAGGAGTCTAAGTAGGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCACTGCATTCACACTaGGAAGAGCAGTATTTTGGA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNALHSH*EEQYFG
Trigger: TCCAAAATACTGCTCTTCCCAGTGTGAATGCAGTGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGCAAATTGGCTGATTaGGCAGATCTTGGGTCACTA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGKLAD*ADLGSL
Trigger: TAGTGACCCAAGATCTGCCCAATCAGCCAATTTGCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGTGGATTTGGATTACTaGCGCTTACTGTCCAATCAG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNVDLDY*RLLSNQ
Trigger: CTGATTGGACAGTAAGCGCCAGTAATCCAAATCCAC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCAAACCGAGTGGATTTaGATTACTGGCGCTTACTGT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNQTEWI*ITGAYC
Trigger: ACAGTAAGCGCCAGTAATCCAAATCCACTCGGTTTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCAAGTGCAACTTTTGTaGGCAAACCGAGTGGATTTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNQVQLL*ANRVDL
Trigger: CAAATCCACTCGGTTTGCCCACAAAAGTTGCACTTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTGAGGGGATTAAGGTaGGCAATGCTATGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLRGLR*AMLCSR
Trigger: TCTTGAACATAGCATTGCCCACCTTAATCCCCTCAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTACAGAAGTCTGCTTaGGTTGTGTCTCGCATGCTT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLQKSA*VVSRML
Trigger: AAGCATGCGAGACACAACCCAAGCAGACTTCTGTAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AACATTCATTCTATGTGCCTGTTACTCTGCCAGGTATATTATATAAAGTGTCCATTGTCCCCAGAAGTTTaGGGTTGCAGTGAGCTACAA +
Preference number: 4 (lower is better)
Translates to: NIHSMCLLLCQVYYIKCPLSPEV*GCSELQ
Trigger: TTGTAGCTCACTGCAACCCCAAACTTCTGGGGACAA...TGGACACTTTATATAATATACCTGGCAGAGTAACAGGCACATAGAATGAATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484210.1
3UTR CAA 72 bp TGGTGGTGGTTCTTTGTTGTTGTTGTTGTTGGTTCTTaGTTGTTGTTGTTGTTGTTGTCGTTGTTGAGATGG +
Preference number: 4 (lower is better)
Translates to: WWWFFVVVVVGS*LLLLLLSLLRW
Trigger: CCATCTCAACAACGACAACAACAACAACAACAACAAAGAACCAACAACAACAACAACAAAGAACCACCACCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484210.1
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAATTCCTGTGAAGTCTaGTTTGGGGCATCCATTGAA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNNSCEV*FGASIE
Trigger: TTCAATGGATGCCCCAAATCAGACTTCACAGGAATT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGTACAAGAAGACTGTaGTTCAGCAACCAATTCCTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGTRRL*FSNQFL
Trigger: CAGGAATTGGTTGCTGAATCACAGTCTTCTTGTACC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTGGACTGCTTGGAGTaGAGCTTGATTTTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLDCLE*SLILVK
Trigger: CTTTACTAAAATCAAGCTTCACTCCAAGCAGTCCAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCAAAGCTTCATTGTCTaGGATAAGCTTCGATATCCG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNQSFIV*DKLRYP
Trigger: CGGATATCGAAGCTTATCTCAGACAATGAAGCTTTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATGACTTTCATTTGCTaGAGAGTCTTCTATGGCTGC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNMTFIC*RVFYGC
Trigger: GCAGCCATAGAAGACTCTTCAGCAAATGAAAGTCAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCCAGTACCAAGAACATaGCTTTCATTTGCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNPVPRT*LSFAEE
Trigger: CTCTTCAGCAAATGAAAGTCATGTTCTTGGTACTGG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTATCTGTTGTTCCATaGTGGTCGACAGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLSVVP*WSTAWD
Trigger: ATCCCAAGCTGTCGACCATCATGGAACAACAGATAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCCAACTGAACTTCTCTaGCTTTTCTTGATCATGGCA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNPTELL*LFLIMA
Trigger: TGCCATGATCAAGAAAAGTCAGAGAAGTTCAGTTGG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTCTGTTGGCAATTTTaGCAAGGTTTCACTACGCTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLCWQF*QGFTTL
Trigger: CAGCGTAGTGAAACCTTGTCAAAATTGCCAACAGAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGAGAAACTTGAAGTGTaGGATAAACTGCTCTCCCTA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNEKLEV*DKLLSL
Trigger: TAGGGAGAGCAGTTTATCTCACACTTCAAGTTTCTC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATCAGAGACCTCCATTaGCGTTTGCGTGCAATTAAT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNIRDLH*RLRAIN
Trigger: ATTAATTGCACGCAAACGTCAATGGAGGTCTCTGAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCGAATGATTTGCTTCTaGGATCAGAGACCTCCATTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNRMICF*DQRPPL
Trigger: CAATGGAGGTCTCTGATCTCAGAAGCAAATCATTCG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAAGATGGGCCTGAAGTaGAAACCTGACAATGCAATT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNKMGLK*KPDNAI
Trigger: AATTGCATTGTCAGGTTTTCACTTCAGGCCCATCTT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATTGGCACTACACTATaGTTAGTCTGGCAAATTGGC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNIGTTL*LVWQIG
Trigger: GCCAATTTGCCAGACTAATCATAGTGTAGTGCCAAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCTTTTACTCGAAGCTaGAGATTCTTGTTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPFTRS*RFLLRG
Trigger: TCCCCTCAACAAGAATCTTCAGCTTCGAGTAAAAGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATACAATGAAAGAGAAGTaGCTGGCTGTTGACTTTGCT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNTMKEK*LAVDFA
Trigger: AGCAAAGTCAACAGCCAGTCACTTCTCTTTCATTGT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCAATCAGTATAGGCTaGAGTTTTCTGGTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPISIG*SFLVLL
Trigger: CAGAAGGACCAGAAAACTTCAGCCTATACTGATTGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCCAGTGTTCTGTTTTaGATTAAGGAGAGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSSVLF*IKESKC
Trigger: GCACTTGCTCTCCTTAATTCAAAACAGAACACTGGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCTCAGAATTTCTTCTaGCTCAGGGTAGTCCACAGA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSQNFF*LRVVHR
Trigger: TCTGTGGACTACCCTGAGTCAGAAGAAATTCTGAGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTAGGCCTACAATATTaGCGGTTTCCATGCTTAACG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLGLQY*RFPCLT
Trigger: CGTTAAGCATGGAAACCGTCAATATTGTAGGCCTAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGTTCAGATGGTTGCTaGAGAAACAAGGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSSDGC*RNKGFF
Trigger: AAAGAAGCCCTTGTTTCTGCAGCAACCATCTGAACT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCACAATGAGAAGAGATaGATTCGCTATTGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNHNEKR*IRYCQS
Trigger: GGACTGACAATAGCGAATGCATCTCTTCTCATTGTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGAGTCTTCTATGGCTaGTTGTCTCACAAGTGTACG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNRVFYG*LSHKCT
Trigger: CGTACACTTGTGAGACAAGCAGCCATAGAAGACTCT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAAGTGTGAGATAAACTaGTCTCCCTACTTAGACTCC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNKCEIN*SPYLDS
Trigger: GGAGTCTAAGTAGGGAGAGCAGTTTATCTCACACTT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGTGAAGATGGAGGCTaGAATTCAGTAAGTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGEDGG*NSVSGV
Trigger: AACACCACTTACTGAATTGCAGCCTCCATCTTCACC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATGTTTAAAGATATTTaGCGTACCAGTGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNMFKDI*RTSGPL
Trigger: GAGAGGCCCACTGGTACGGCAAATATCTTTAAACAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGGTCTCACGTCTGTTaGACAAACAGCTCCATTTTC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNRSHVC*TNSSIF
Trigger: GAAAATGGAGCTGTTTGTGCAACAGACGTGAGACCT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATTTTCCTCTTCCCCTaGCTCGGACATATACATACT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNIFLFP*LGHIHT
Trigger: AGTATGTATATGTCCGAGGCAGGGGAAGAGGAAAAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTACATGGCACAACACTaGTTAATTCAGCCACTCCAG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNYMAQH*LIQPLQ
Trigger: CTGGAGTGGCTGAATTAAGCAGTGTTGTGCCATGTA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATACCTATCACATTTTCTaGACTGCTTGGAGTGAAGCT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNTYHIF*TAWSEA
Trigger: AGCTTCACTCCAAGCAGTCCAGAAAATGTGATAGGT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATGTCGCCTTTCTGGTaGGAATTCTCATTAGTCTCC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNMSPFW*EFSLVS
Trigger: GGAGACTAATGAGAATTCCCACCAGAAAGGCGACAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTCATGTCGCCTTTCTaGTGGGAATTCTCATTAGTC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNFMSPF*WEFSLV
Trigger: GACTAATGAGAATTCCCACCAGAAAGGCGACATGAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTGCTTTCCTTCCAGTaGATTCATGTCGCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLLSFQ*IHVAFL
Trigger: CAGAAAGGCGACATGAATCCACTGGAAGGAAAGCAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTGAAGAGTCTTCTATaGCTGCTTGTCTCACAAGTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLKSLL*LLVSQV
Trigger: CACTTGTGAGACAAGCAGCCATAGAAGACTCTTCAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGTTCTATCTTGTCCTaGGCTGCTGAACTTATCTGT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSSILS*AAELIC
Trigger: ACAGATAAGTTCAGCAGCCCAGGACAAGATAGAACT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCACATGTCGTTCACTTaGACTCTTTCTGGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNHMSFT*TLSGAF
Trigger: GAAAGCTCCAGAAAGAGTCCAAGTGAACGACATGTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAAAATCTCTGGAACTTaGATGTTGTGCTGCCGGACA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNKISGT*MLCCRT
Trigger: TGTCCGGCAGCACAACATCCAAGTTCCAGAGATTTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGTGACCAAAATCTCTaGAACTTGGATGTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNCDQNL*NLDVVL
Trigger: CAGCACAACATCCAAGTTCCAGAGATTTTGGTCACA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTCCAGGTCTCGATCTaGTTCTTCTGTGACCAAAAT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNFQVSI*FFCDQN
Trigger: ATTTTGGTCACAGAAGAACCAGATCGAGACCTGGAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGTATTCAAGCCAGCTaGAATCATAAGAAACTCGGC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSIQAS*NHKKLG
Trigger: GCCGAGTTTCTTATGATTCCAGCTGGCTTGAATACT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCACTGCATTCACACTaGGAAGAGCAGTATTTTGGA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNALHSH*EEQYFG
Trigger: TCCAAAATACTGCTCTTCCCAGTGTGAATGCAGTGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATTAGTCTGGCAAATTaGCTGATTGGGCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNISLAN*LIGQIL
Trigger: CAAGATCTGCCCAATCAGCCAATTTGCCAGACTAAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGTGGATTTGGATTACTaGCGCTTACTGTCCAATCAG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNVDLDY*RLLSNQ
Trigger: CTGATTGGACAGTAAGCGCCAGTAATCCAAATCCAC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCAAACCGAGTGGATTTaGATTACTGGCGCTTACTGT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNQTEWI*ITGAYC
Trigger: ACAGTAAGCGCCAGTAATCCAAATCCACTCGGTTTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCAAGTGCAACTTTTGTaGGCAAACCGAGTGGATTTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNQVQLL*ANRVDL
Trigger: CAAATCCACTCGGTTTGCCCACAAAAGTTGCACTTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATTGTCATCCTCATCTaGGCCATCAGATTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNIVILI*AIRFFK
Trigger: CTTGAAGAATCTGATGGCCCAGATGAGGATGACAAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTGAGGGGATTAAGGTaGGCAATGCTATGTTCAAGA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLRGLR*AMLCSR
Trigger: TCTTGAACATAGCATTGCCCACCTTAATCCCCTCAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
3UTR CAA 72 bp TGGTTCTTTGTTGTTGTTGTTGTTGGTTCTTTGTTGTaGTTGTTGTTGTTGTCGTTGTTGAGATGGAGTCTC +
Preference number: 4 (lower is better)
Translates to: WFFVVVVVGSLL*LLLLSLLRWSL
Trigger: GAGACTCCATCTCAACAACGACAACAACAACAACAACAACAAAGAACCAACAACAACAACAACAAAGAACCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484210.1
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTTAGATTTCTGGGATaGATTTGTTTAGTTCGAGGC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLRFLG*ICLVRG
Trigger: GCCTCGAACTAAACAAATTCATCCCAGAAATCTAAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAATTCCTGTGAAGTCTaGTTTGGGGCATCCATTGAA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNNSCEV*FGASIE
Trigger: TTCAATGGATGCCCCAAATCAGACTTCACAGGAATT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGAGGCAACATGAGTTaGATTATAGATTGGCATGGG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNRGNMS*IIDWHG
Trigger: CCCATGCCAATCTATAATTCAACTCATGTTGCCTCT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATTTGCTCTACGCTTTaGTTAACAACAGAGGCAACA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNICSTL*LTTEAT
Trigger: TGTTGCCTCTGTTGTTAATCAAAGCGTAGAGCAAAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTGGACTGCTTGGAGTaGAGCTTGATTTTAGTAAAG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLDCLE*SLILVK
Trigger: CTTTACTAAAATCAAGCTTCACTCCAAGCAGTCCAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCAAAGCTTCATTGTCTaGGATAAGCTTCGATATCCG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNQSFIV*DKLRYP
Trigger: CGGATATCGAAGCTTATCTCAGACAATGAAGCTTTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTTCCTCTTAGTGGATaGGGAGGAGGTATTATATTT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLPLSG*GGGIIF
Trigger: AAATATAATACCTCCTCCTCATCCACTAAGAGGAAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATGACTTTCATTTGCTaGAGAGTCTTCTATGGCTGC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNMTFIC*RVFYGC
Trigger: GCAGCCATAGAAGACTCTTCAGCAAATGAAAGTCAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCAGTACCAAGAACATaGCTTTCATTTGCTGAAGAG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPVPRT*LSFAEE
Trigger: CTCTTCAGCAAATGAAAGTCATGTTCTTGGTACTGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCACTTTCATTTTGCTaGAGTTCTTCATCATCCCCA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPLSFC*SSSSSP
Trigger: TGGGGATGATGAAGAACTTCAGCAAAATGAAAGTGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAAAGCTCGATTCTGTTaGGGAATGTTCTATCTCAGC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNKARFC*GMFYLS
Trigger: GCTGAGATAGAACATTCCTCAACAGAATCGAGCTTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGAGAAACTTGAAGTGTaGGATAAACTGCTCTCCCTA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNEKLEV*DKLLSL
Trigger: TAGGGAGAGCAGTTTATCTCACACTTCAAGTTTCTC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCAATTAATCTGTTCTaGTGCAGTACGCCTCATTTC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNAINLF*CSTPHF
Trigger: GAAATGAGGCGTACTGCATCAGAACAGATTAATTGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATCAGAGACCTCCATTaGCGTTTGCGTGCAATTAAT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNIRDLH*RLRAIN
Trigger: ATTAATTGCACGCAAACGTCAATGGAGGTCTCTGAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATATCACAGAGCTGTTaGACAGGAAAAACGTTGGTA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNISQSC*TGKTLV
Trigger: TACCAACGTTTTTCCTGTTCAACAGCTCTGTGATAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAAGATGGGCCTGAAGTaGAAACCTGACAATGCAATT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNKMGLK*KPDNAI
Trigger: AATTGCATTGTCAGGTTTTCACTTCAGGCCCATCTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATTGGCACTACACTATaGTTAGTCTGGCAAATTGGC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNIGTTL*LVWQIG
Trigger: GCCAATTTGCCAGACTAATCATAGTGTAGTGCCAAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCCAGTGTTCTGTTTTaGATTAAGGAGAGCAAGTGC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSSVLF*IKESKC
Trigger: GCACTTGCTCTCCTTAATTCAAAACAGAACACTGGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATACTACTGTGGACTTTTaGTTACCTAATGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNTTVDF*LPNALL
Trigger: CAAGAGAGCATTAGGTAATCAAAAGTCCACAGTAGT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGGCATCTTTATTGCTaGATTCAACTACTGTGGACT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRHLYC*IQLLWT
Trigger: AGTCCACAGTAGTTGAATTCAGCAATAAAGATGCCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGTTCAGATGGTTGCTaGAGAAACAAGGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSSDGC*RNKGFF
Trigger: AAAGAAGCCCTTGTTTCTGCAGCAACCATCTGAACT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCACAATGAGAAGAGATaGATTCGCTATTGTCAGTCC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNHNEKR*IRYCQS
Trigger: GGACTGACAATAGCGAATGCATCTCTTCTCATTGTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATACTAGGCTTTGCACATaGTCTATTGCAATACTCACA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNTRLCT*SIAILT
Trigger: TGTGAGTATTGCAATAGAGCATGTGCAAAGCCTAGT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCAGTTTGATAGTATGTaGGTGGGATTTCTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNQFDSM*VGFLVL
Trigger: AAGCACAAGAAATCCCACGCACATACTATCAAACTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGTCCTTCTGCTTTTGTaGACTAGAAAGTTCAGGCTT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNVLLLL*TRKFRL
Trigger: AAGCCTGAACTTTCTAGTGCACAAAAGCAGAAGGAC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAAGTGTGAGATAAACTaGTCTCCCTACTTAGACTCC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNKCEIN*SPYLDS
Trigger: GGAGTCTAAGTAGGGAGAGCAGTTTATCTCACACTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATACCTCCATTGACGTTTaGGTGCAATTAATCTGTTCT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNTSIDV*VQLICS
Trigger: AGAACAGATTAATTGCACGCAAACGTCAATGGAGGT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATGTTTAAAGATATTTaGCGTACCAGTGGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNMFKDI*RTSGPL
Trigger: GAGAGGCCCACTGGTACGGCAAATATCTTTAAACAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTCTCTTGCTTAAGCTaGTTTTCCACTTGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLSCLS*FSTCLN
Trigger: ATTCAAGCAAGTGGAAAAGCAGCTTAAGCAAGAGAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAATCCACACATTTCTTaGTATGTGCCTTGGACTTCA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNNPHIS*YVPWTS
Trigger: TGAAGTCCAAGGCACATAGCAAGAAATGTGTGGATT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000379388.7
ENST00000541134.5
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGCAACAGCTTTTCCTaGCATAGAACTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSNSFS*HRTSQN
Trigger: ATTCTGAGAAGTTCTATGGCAGGAAAAGCTGTTGCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTCATGTCGCCTTTCTaGTGGGAATTCTCATTAGTC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNFMSPF*WEFSLV
Trigger: GACTAATGAGAATTCCCACCAGAAAGGCGACATGAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGTTCTATCTTGTCCTaGGCTGCTGAACTTATCTGT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSSILS*AAELIC
Trigger: ACAGATAAGTTCAGCAGCCCAGGACAAGATAGAACT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGTGACCAAAATCTCTaGAACTTGGATGTTGTGCTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNCDQNL*NLDVVL
Trigger: CAGCACAACATCCAAGTTCCAGAGATTTTGGTCACA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTCCAGGTCTCGATCTaGTTCTTCTGTGACCAAAAT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNFQVSI*FFCDQN
Trigger: ATTTTGGTCACAGAAGAACCAGATCGAGACCTGGAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATTTTGGAAAGATGTTaGGTGTACAGGAGACAGATG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNILERC*VYRRQM
Trigger: CATCTGTCTCCTGTACACCCAACATCTTTCCAAAAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGAAGAGCAGTATTTTaGAAAGATGTTGGGTGTACA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGRAVF*KDVGCT
Trigger: TGTACACCCAACATCTTTCCAAAATACTGCTCTTCC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAACAGAATTTTTATCTaGCTTGCTACCCTGCGTAGA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNNRIFI*LATLRR
Trigger: TCTACGCAGGGTAGCAAGCCAGATAAAAATTCTGTT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAATGCAATTGGTATTTaGGAGCAAAGCAATCCTCAC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNNAIGI*EQSNPH
Trigger: GTGAGGATTGCTTTGCTCCCAAATACCAATTGCATT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATTAGTCTGGCAAATTaGCTGATTGGGCAGATCTTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNISLAN*LIGQIL
Trigger: CAAGATCTGCCCAATCAGCCAATTTGCCAGACTAAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATTGTCATCCTCATCTaGGCCATCAGATTCTTCAAG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNIVILI*AIRFFK
Trigger: CTTGAAGAATCTGATGGCCCAGATGAGGATGACAAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAAGAACGGCGAAAGATaGCTCTTCTGTATTTTGTTT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNKNGER*LFCILF
Trigger: AAACAAAATACAGAAGAGTCATCTTTCGCCGTTCTT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGATTCTTCAGATTTTaGGGCTTCAGCAATTATTCC +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRFFRF*GFSNYS
Trigger: GGAATAATTGCTGAAGCCTCAAAATCTGAAGAATCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATTTGCTCTACGCTTTaGTTAACAACAGAGGCAACA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNICSTL*LTTEAT
Trigger: TGTTGCCTCTGTTGTTAATCAAAGCGTAGAGCAAAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTTCCTCTTAGTGGATaGGGAGGAGGTATTATATTT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLPLSG*GGGIIF
Trigger: AAATATAATACCTCCTCCTCATCCACTAAGAGGAAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATATCACAGAGCTGTTaGACAGGAAAAACGTTGGTA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNISQSC*TGKTLV
Trigger: TACCAACGTTTTTCCTGTTCAACAGCTCTGTGATAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGCGGTGCATGGATTTaGTTTAACAAATTGATATCA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGGAWI*FNKLIS
Trigger: TGATATCAATTTGTTAAATCAAATCCATGCACCGCC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGTTCCAACTGGATCTaGAATAACTTGATTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNCSNWI*NNLIWQ
Trigger: TTGCCAAATCAAGTTATTTCAGATCCAGTTGGAACA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATGATGTGGATGACTTaGTGTTTTCAAATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNMMWMT*CFQIPA
Trigger: TGCAGGAATTTGAAAACATCAAGTCATCCACATCAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACACTACTGTGGACTTTTaGTTACCTAATGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNTTVDF*LPNALL
Trigger: CAAGAGAGCATTAGGTAATCAAAAGTCCACAGTAGT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGGCATCTTTATTGCTaGATTCAACTACTGTGGACT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNRHLYC*IQLLWT
Trigger: AGTCCACAGTAGTTGAATTCAGCAATAAAGATGCCT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCAGATCGCTCATAACTaGATCTCTGTTTTTCATCTG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNQIAHN*ISVFHL
Trigger: CAGATGAAAAACAGAGATTCAGTTATGAGCGATCTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379388.7
ENST00000541134.5
CDS-3UTR TCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCACAGAAAATCTGTCTaGAGTGTAAAGTTACTGTCT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNHRKSV*SVKLLS
Trigger: AGACAGTAACTTTACACTTCAGACAGATTTTCTGTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTTTCAGAAGAAGATTaGACATTTGCTCTACGCTTT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLSEED*TFALRF
Trigger: AAAGCGTAGAGCAAATGTGCAATCTTCTTCTGAAAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACACTAGGCTTTGCACATaGTCTATTGCAATACTCACA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNTRLCT*SIAILT
Trigger: TGTGAGTATTGCAATAGAGCATGTGCAAAGCCTAGT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAAGCACACTAGGCTTTaGACATGCTCTATTGCAATA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNKHTRL*TCSIAI
Trigger: TATTGCAATAGAGCATGTGCAAAGCCTAGTGTGCTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCAGTTTGATAGTATGTaGGTGGGATTTCTTGTGCTT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNQFDSM*VGFLVL
Trigger: AAGCACAAGAAATCCCACGCACATACTATCAAACTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTCACACTATCCAGTTaGTTGTCATCTACCAAAGCT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNFTLSS*LSSTKA
Trigger: AGCTTTGGTAGATGACAAGCAACTGGATAGTGTGAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGACAGAAGAAACACTTaGTTTGATTTTTCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNDRRNT*FDFSVG
Trigger: CCCTACTGAAAAATCAAAGCAAGTGTTTCTTCTGTC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGCTGCTTTTCCACTTaGTTGAATAGACCAATAAGT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSCFST*LNRPIS
Trigger: ACTTATTGGTCTATTCAAGCAAGTGGAAAAGCAGCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTCTCTTGCTTAAGCTaGTTTTCCACTTGCTTGAAT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLSCLS*FSTCLN
Trigger: ATTCAAGCAAGTGGAAAAGCAGCTTAAGCAAGAGAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAATCCACACATTTCTTaGTATGTGCCTTGGACTTCA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNNPHIS*YVPWTS
Trigger: TGAAGTCCAAGGCACATAGCAAGAAATGTGTGGATT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379388.7
ENST00000541134.5
CDS-3UTR GCA 90 bp TCTCTGTTTTTCATCTTTAGTCTTAAAGGAGAAGTTACAGTAAGTGCAGTGGTAAGCAACAGCTTTTCCTaGCATAGAACTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: SLFFIFSLKGEVTVSAVVSNSFS*HRTSQN
Trigger: ATTCTGAGAAGTTCTATGGCAGGAAAAGCTGTTGCT...TACCACTGCACTTACTGTAACTTCTCCTTTAAGACTAAAGATGAAAAACAGAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGCAACAGCTTTTCCTaGCATAGAACTTCTCAGAAT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSNSFS*HRTSQN
Trigger: ATTCTGAGAAGTTCTATGGCAGGAAAAGCTGTTGCT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AACATTCATTCTATGTGCCTGTTACTCTGCCAGGTATATTATATAAAGTGTCCAAACATTCATTCTATGTaGCTGTTACTCTGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: NIHSMCLLLCQVYYIKCPNIHSM*LLLCQV
Trigger: TACCTGGCAGAGTAACAGGCACATAGAATGAATGTT...TGGACACTTTATATAATATACCTGGCAGAGTAACAGGCACATAGAATGAATGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484210.1
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCCTTCAGAACTTTTTaGAGATGTTCCACTTTCATT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNAFRTF*RCSTFI
Trigger: AATGAAAGTGGAACATCTCCAAAAAGTTCTGAAGGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATTTTGGAAAGATGTTaGGTGTACAGGAGACAGATG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNILERC*VYRRQM
Trigger: CATCTGTCTCCTGTACACCCAACATCTTTCCAAAAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGAAGAGCAGTATTTTaGAAAGATGTTGGGTGTACA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGRAVF*KDVGCT
Trigger: TGTACACCCAACATCTTTCCAAAATACTGCTCTTCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAACAGAATTTTTATCTaGCTTGCTACCCTGCGTAGA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNNRIFI*LATLRR
Trigger: TCTACGCAGGGTAGCAAGCCAGATAAAAATTCTGTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAATGCAATTGGTATTTaGGAGCAAAGCAATCCTCAC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNNAIGI*EQSNPH
Trigger: GTGAGGATTGCTTTGCTCCCAAATACCAATTGCATT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTGATTTTTAACCCCTaGAGACTTCCTTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLIFNP*RLPFLV
Trigger: AACCAAGAAAGGAAGTCTCCAGGGGTTAAAAATCAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAAGAACGGCGAAAGATaGCTCTTCTGTATTTTGTTT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNKNGER*LFCILF
Trigger: AAACAAAATACAGAAGAGTCATCTTTCGCCGTTCTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGATTCTTCAGATTTTaGGGCTTCAGCAATTATTCC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNRFFRF*GFSNYS
Trigger: GGAATAATTGCTGAAGCCTCAAAATCTGAAGAATCT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACACTGTCTTCTACGTCTaGATGAATACTAAGTGCTTT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNTVFYV*MNTKCF
Trigger: AAAGCACTTAGTATTCATTCAGACGTAGAAGACAGT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGCGGTGCATGGATTTaGTTTAACAAATTGATATCA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGGAWI*FNKLIS
Trigger: TGATATCAATTTGTTAAATCAAATCCATGCACCGCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGATCTGAAATAACTTaGTTTGGCAAAGAATGCACA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGSEIT*FGKECT
Trigger: TGTGCATTCTTTGCCAAATCAAGTTATTTCAGATCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGTTCCAACTGGATCTaGAATAACTTGATTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNCSNWI*NNLIWQ
Trigger: TTGCCAAATCAAGTTATTTCAGATCCAGTTGGAACA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATGATGTGGATGACTTaGTGTTTTCAAATTCCTGCA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNMMWMT*CFQIPA
Trigger: TGCAGGAATTTGAAAACATCAAGTCATCCACATCAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCTCTGTTTTTCATCTaGTTCTTCTGTATCCTGTTC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSLFFI*FFCILF
Trigger: GAACAGGATACAGAAGAATCAGATGAAAAACAGAGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000379388.7
ENST00000541134.5
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCACAGAAAATCTGTCTaGAGTGTAAAGTTACTGTCT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNHRKSV*SVKLLS
Trigger: AGACAGTAACTTTACACTTCAGACAGATTTTCTGTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR TCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCAGATCGCTCATAACTaGATCTCTGTTTTTCATCTT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNQIAHN*ISVFHL
Trigger: AAGATGAAAAACAGAGATTCAGTTATGAGCGATCTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTTTCAGAAGAAGATTaGACATTTGCTCTACGCTTT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLSEED*TFALRF
Trigger: AAAGCGTAGAGCAAATGTGCAATCTTCTTCTGAAAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCGTGGGATTTCTTGTaGTTATACAGATTACTTTTA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNAWDFL*LYRLLL
Trigger: TAAAAGTAATCTGTATAAGCACAAGAAATCCCACGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTATGTTGGTTGGATTTaGGAACAAAGTGTTCATGTT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNYVGWI*EQSVHV
Trigger: AACATGAACACTTTGTTCCCAAATCCAACCAACATA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAAACCTGTTCAAGTTTaGCATTCTCTTGATTTTGCA +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNKPVQV*HSLDFA
Trigger: TGCAAAATCAAGAGAATGCCAAACTTGAACAGGTTT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTGATAGTATGTGCGTaGGATTTCTTGTGCTTATAC +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLIVCA*DFLCLY
Trigger: GTATAAGCACAAGAAATCCCACGCACATACTATCAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCCTTCAGAACTTTTTaGAGATGTTCCACTTTCATT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNAFRTF*RCSTFI
Trigger: AATGAAAGTGGAACATCTCCAAAAAGTTCTGAAGGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTGTTCTTCACTGATTaGCACTACACTATGATTAGT +
Preference number: 4 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLFFTD*HYTMIS
Trigger: ACTAATCATAGTGTAGTGCCAATCAGTGAAGAACAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTGATTTTTAACCCCTaGAGACTTCCTTTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLIFNP*RLPFLV
Trigger: AACCAAGAAAGGAAGTCTCCAGGGGTTAAAAATCAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCGTGGGATTTCTTGTaGTTATACAGATTACTTTTA +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNAWDFL*LYRLLL
Trigger: TAAAAGTAATCTGTATAAGCACAAGAAATCCCACGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTATACACAGAAACTCTaGCCCATAGCCATAAAATTT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNYTQKL*PIAIKF
Trigger: AAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR GCA 90 bp AACATTCATTCTATGTGCCTGTTACTCTGCCAGGTATATTATATAAAGTGTCCAATGTGCCTGTTACTCTaGCAGGTATATTATATAAAG +
Preference number: 4 (lower is better)
Translates to: NIHSMCLLLCQVYYIKCPMCLLL*QVYYIK
Trigger: CTTTATATAATATACCTGGCAGAGTAACAGGCACAT...TGGACACTTTATATAATATACCTGGCAGAGTAACAGGCACATAGAATGAATGTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484210.1
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTATGTTGGTTGGATTTaGGAACAAAGTGTTCATGTT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNYVGWI*EQSVHV
Trigger: AACATGAACACTTTGTTCCCAAATCCAACCAACATA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTGTTCTTCACTGATTaGCACTACACTATGATTAGT +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLFFTD*HYTMIS
Trigger: ACTAATCATAGTGTAGTGCCAATCAGTGAAGAACAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CCA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATATTTTCTGAGTTATaGGCAAGGATTCTGATAGAG +
Preference number: 4 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNIFSEL*ARILIE
Trigger: CTCTATCAGAATCCTTGCCCATAACTCAGAAAATAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGCGCCCTGGGCAGAACGTCCATTGGGTCCGTGTGTACCCCAGAAAAGCAATCGTGGGCTTCACGTGATTaGCCGAGGCAGCCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: SALGRTSIGSVCTPEKQSWASRD*PRQPSL
Trigger: CAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCA...CGATTGCTTTTCTGGGGTACACACGGACCCAATGGACGTTCTGCCCAGGGCGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CAA 90 bp GGGTCAGGATGTGGTGAGGCCACAGAAGGCATCCCCGCTGCTGTCTGGGGGCTGTCGTCTTCATTTTCATaGTCATCCTCATCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: GSGCGEATEGIPAAVWGLSSSFS*SSSSGP
Trigger: TGGCCCAGATGAGGATGACAATGAAAATGAAGACGA...CAGCCCCCAGACAGCAGCGGGGATGCCTTCTGTGGCCTCACCACATCCTGACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CAA 90 bp TCAGAATGTGCCTTCAGCAGAGGTTGTGACGTGGACGCTGGTTGGCCCTGTATGTGGGCAGAACGTCCATaGGGTCCGTGTGTACCCCAG +
Preference number: 5 (lower is better)
Translates to: SECAFSRGCDVDAGWPCMWAERP*GPCVPQ
Trigger: CTGGGGTACACACGGACCCAATGGACGTTCTGCCCA...CATACAGGGCCAACCAGCGTCCACGTCACAACCTCTGCTGAAGGCACATTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS TCA 90 bp TGCAGGCGTATGGGCAGCATGAATGATGATGGCACCTTCTGCACCTaGCTTCCAAGGGGCCTGAGCTCTGGTGGTAGCAGAGGATGCGAA +
Preference number: 5 (lower is better)
Translates to: CRRMGSMNDDGTFCT*LPRGLSSGGSRGCE
Trigger: TTCGCATCCTCTGCTACCACCAGAGCTCAGGCCCCTTGGAAGTCAGGTGCAGAAGGTGCCATCATCATTCATGCTGCCCATACGCCTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 90 bp TGTGCCAGTGCCTTGCTCCTCACTGACATGGCTTCACCAGCAGCATaGCATCCTTGGTGGCTCTCATCCAGGGACTGTCCAGTACCAAGA +
Preference number: 5 (lower is better)
Translates to: CASALLLTDMASPAA*HPWWLSSRDCPVPR
Trigger: TCTTGGTACTGGACAGTCCCTGGATGAGAGCCACCAAGGATGCCATGCTGCTGGTGAAGCCATGTCAGTGAGGAGCAAGGCACTGGCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp GAGTTCAGGCTTGGGCTTCACGTGATTTGCCGAGGCAGCCTTCTCTGTGTCCATGCCTGGCACGCGGATTaGGCCGATAGGAATACATGG +
Preference number: 5 (lower is better)
Translates to: EFRLGLHVICRGSLLCVHAWHAD*ADRNTW
Trigger: CCATGTATTCCTATCGGCCAAATCCGCGTGCCAGGC...ATGGACACAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCAAGCCTGAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS GCA 90 bp GGCACATGCCCAGTCACTCCCACTCGAGAAGGTGAAGATGGAGGCTaGAATTCAGTAAGTGGTGTTGTCTGGGGTGGGGTGATGCTTCCA +
Preference number: 5 (lower is better)
Translates to: GTCPVTPTREGEDGG*NSVSGVVWGGVMLP
Trigger: TGGAAGCATCACCCCACCCCAGACAACACCACTTACTGAATTGCAGCCTCCATCTTCACCTTCTCGAGTGGGAGTGACTGGGCATGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGCGCCCTGGGCAGAACGTCCATTGGGTCCGTGTGTACCCCAGAAAAGCAATCGTGTGTCTCGCATGCTTaGCTTTGGGAAGCTGGCATT +
Preference number: 5 (lower is better)
Translates to: SALGRTSIGSVCTPEKQSCVSHA*LWEAGI
Trigger: AATGCCAGCTTCCCAAAGCAAAGCATGCGAGACACA...CGATTGCTTTTCTGGGGTACACACGGACCCAATGGACGTTCTGCCCAGGGCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CAA 90 bp AAAGCAATCGGTGATCCTGACATCCTCGTCAGTACTCACAGGGTCCTGAAGGCTTCAGGCCATCAAGCCTaGCATGGTCACCTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: KAIGDPDILVSTHRVLKASGHQA*HGHLQG
Trigger: CCCCTGCAGGTGACCATGCAAGGCTTGATGGCCTGA...AGCCTTCAGGACCCTGTGAGTACTGACGAGGATGTCAGGATCACCGATTGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS TCA 90 bp GTGGCGCCTTCCTCCTCGCTCTCCCCACTGTCTTCTACGTCTGAATaGATACTAAGTGCTTTGGGGGACTCGTGGGACAAGAACAAGCCA +
Preference number: 5 (lower is better)
Translates to: VAPSSSLSPLSSTSE*ILSALGDSWDKNKP
Trigger: TGGCTTGTTCTTGTCCCACGAGTCCCCCAAAGCACTTAGTATTCATTCAGACGTAGAAGACAGTGGGGAGAGCGAGGAGGAAGGCGCCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 90 bp TCGGTAGCCTGCTGCCTTTGTAGCTGGGCGTGTACCGTTCCTACGTaGGAGTCTTGCTTTCCTTCCAGTGGATTCATGTCGCCTTTCTGG +
Preference number: 5 (lower is better)
Translates to: SVACCLCSWACTVPT*ESCFPSSGFMSPFW
Trigger: CCAGAAAGGCGACATGAATCCACTGGAAGGAAAGCAAGACTCTCACGTAGGAACGGTACACGCCCAGCTACAAAGGCAGCAGGCTACCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 90 bp GCAATGCCTTTTCCCCTGTGGGCAAAGCAGAGGGTGTTGACGTGGTaGCAAGAGCTGCAGAGGGTCCGTTACTCCTTCCAGAGTCTTGTT +
Preference number: 5 (lower is better)
Translates to: AMPFPLWAKQRVLTW*QELQRVRYSFQSLV
Trigger: AACAAGACTCTGGAAGGAGTAACGGACCCTCTGCAGCTCTTGTCACCACGTCAACACCCTCTGCTTTGCCCACAGGGGAAAAGGCATTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 90 bp GCAGTTCTATCTTGTCCTGGGCTGCTGAACTTATCTGTTGTTCCATaGTGGTCGACAGCTTGGGATCCATGGTCTGCTCAGGGCCCCTGG +
Preference number: 5 (lower is better)
Translates to: AVLSCPGLLNLSVVP*WSTAWDPWSAQGPW
Trigger: CCAGGGGCCCTGAGCAGACCATGGATCCCAAGCTGTCGACCATCATGGAACAACAGATAAGTTCAGCAGCCCAGGACAAGATAGAACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 90 bp CAGCATTTGACATCCTCTTTATTATGTGCACAGGCTGCAGCTCCATaGCGCCCAGGTCATGCTGTCTCTCATCAGTGGCGCCTTCCTCCT +
Preference number: 5 (lower is better)
Translates to: QHLTSSLLCAQAAAP*RPGHAVSHQWRLPP
Trigger: AGGAGGAAGGCGCCACTGATGAGAGACAGCATGACCTGGGCGCCATGGAGCTGCAGCCTGTGCACATAATAAAGAGGATGTCAAATGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TCAGGATGTGGTGAGGCCACAGAAGGCATCCCCGCTGCTGTCTGGGGGCTGTGCACCAATAAGTCTGACTaGGAATGGGTAGTTATTGCT +
Preference number: 5 (lower is better)
Translates to: SGCGEATEGIPAAVWGLCTNKSD*EWVVIA
Trigger: AGCAATAACTACCCATTCCAAGTCAGACTTATTGGT...GCACAGCCCCCAGACAGCAGCGGGGATGCCTTCTGTGGCCTCACCACATCCTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS TCA 90 bp GTCGTTCACTTGGACTCTTTCTGGAGCTTTCCTGAAGTTCTCCTCTaGGAGCGTCTGATAGTGCAAGCTGGTGAGGATGAGACCCGTCCC +
Preference number: 5 (lower is better)
Translates to: VVHLDSFWSFPEVLL*ERLIVQAGEDETRP
Trigger: GGGACGGGTCTCATCCTCACCAGCTTGCACTATCAGACGCTCTCAGAGGAGAACTTCAGGAAAGCTCCAGAAAGAGTCCAAGTGAACGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 90 bp ATTTGCCGTACCAGTGGGCCTCTCCTTCTTTCTAAGAGAGGCACATaGCCAGTCACTCCCACTCGAGAAGGTGAAGATGGAGGCTGCAAT +
Preference number: 5 (lower is better)
Translates to: ICRTSGPLLLSKRGT*PVTPTREGEDGGCN
Trigger: ATTGCAGCCTCCATCTTCACCTTCTCGAGTGGGAGTGACTGGGCATGTGCCTCTCTTAGAAAGAAGGAGAGGCCCACTGGTACGGCAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 90 bp TGTGCTTCTTCAATTTTGTCAAGACCATGCGGAAGAGCCACCCCGTaGAGTCCAGTGACCCTTCTCCACGGAACCCAGGACAACATGCTA +
Preference number: 5 (lower is better)
Translates to: CASSILSRPCGRATP*SPVTLLHGTQDNML
Trigger: TAGCATGTTGTCCTGGGTTCCGTGGAGAAGGGTCACTGGACTGCACGGGGTGGCTCTTCCGCATGGTCTTGACAAAATTGAAGAAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442081.6
CDS GCA 90 bp CAAGAGCTGCAGAGGGTCCGTTACTCCTTCCAGAGTCTTGTTCTGTaGTGGGTAACCTTCTGGCAAAGGGAGTTGGTGGACTCACTGTTT +
Preference number: 5 (lower is better)
Translates to: QELQRVRYSFQSLVL*WVTFWQRELVDSLF
Trigger: AAACAGTGAGTCCACCAACTCCCTTTGCCAGAAGGTTACCCAGCACAGAACAAGACTCTGGAAGGAGTAACGGACCCTCTGCAGCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 90 bp GAGCTGCAGAGGGTCCGTTACTCCTTCCAGAGTCTTGTTCTGTGCTaGGTAACCTTCTGGCAAAGGGAGTTGGTGGACTCACTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: ELQRVRYSFQSLVLC*VTFWQRELVDSLFD
Trigger: ATCAAACAGTGAGTCCACCAACTCCCTTTGCCAGAAGGTTACCCAGCACAGAACAAGACTCTGGAAGGAGTAACGGACCCTCTGCAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp GTCTACAGACGGAATTGTGTCGTTTTCATCTCTCGCAGCACGCTGCCTGGCCTTAGAAGTCTGCTTGGGTaGTGTCTCGCATGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: VYRRNCVVFISRSTLPGLRSLLG*CLACFA
Trigger: AGCAAAGCATGCGAGACACAACCCAAGCAGACTTCT...AAGGCCAGGCAGCGTGCTGCGAGAGATGAAAACGACACAATTCCGTCTGTAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS TCA 90 bp CCACCCTGGGACATGTTGGCTGAAAGTGGCTGTACGTTTGTCACCTaGAGGTCCTTCTGCTTTTGTGCACTAGAAAGTTCAGGCTTGGGA +
Preference number: 5 (lower is better)
Translates to: PPWDMLAESGCTFVT*RSFCFCALESSGLG
Trigger: TCCCAAGCCTGAACTTTCTAGTGCACAAAAGCAGAAGGACCTTCAGGTGACAAACGTACAGCCACTTTCAGCCAACATGTCCCAGGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 90 bp CTCATTAGTCTCCAACCTGGAGACTCCACCCTGGGACATGTTGGCTaGAAGTGGCTGTACGTTTGTCACCTGAAGGTCCTTCTGCTTTTG +
Preference number: 5 (lower is better)
Translates to: LISLQPGDSTLGHVG*KWLYVCHLKVLLLL
Trigger: CAAAAGCAGAAGGACCTTCAGGTGACAAACGTACAGCCACTTTCAGCCAACATGTCCCAGGGTGGAGTCTCCAGGTTGGAGACTAATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 90 bp GCAGGATCAGCGCCTTCGGATCTCCATCTACGCAGTTCAGATGGTTaGTGCAGAAACAAGGGCTTCTTTGGGGAGACAGATTCTTCAGAT +
Preference number: 5 (lower is better)
Translates to: AGSAPSDLHLRSSDG*CRNKGFFGETDSSD
Trigger: ATCTGAAGAATCTGTCTCCCCAAAGAAGCCCTTGTTTCTGCAGCAACCATCTGAACTGCGTAGATGGAGATCCGAAGGCGCTGATCCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 90 bp GCTTTGGGGGACTCGTGGGACAAGAACAAGCCACCAGCATCTGGTTaGAAGACAAGACCCAGTTTGATAGTATGTGCGTGGGATTTCTTG +
Preference number: 5 (lower is better)
Translates to: ALGDSWDKNKPPASG*KTRPSLIVCAWDFL
Trigger: CAAGAAATCCCACGCACATACTATCAAACTGGGTCTTGTCTTGCAACCAGATGCTGGTGGCTTGTTCTTGTCCCACGAGTCCCCCAAAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 90 bp TTTGGCAGGATCAGCGCCTTCGGATCTCCATCTACGCAGTTCAGATaGTTGCTGCAGAAACAAGGGCTTCTTTGGGGAGACAGATTCTTC +
Preference number: 5 (lower is better)
Translates to: FGRISAFGSPSTQFR*LLQKQGLLWGDRFF
Trigger: GAAGAATCTGTCTCCCCAAAGAAGCCCTTGTTTCTGCAGCAACCATCTGAACTGCGTAGATGGAGATCCGAAGGCGCTGATCCTGCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 90 bp GTCCGTTACTCCTTCCAGAGTCTTGTTCTGTGCTGGGTAACCTTCTaGCAAAGGGAGTTGGTGGACTCACTGTTTGATCGGCACTTTCAG +
Preference number: 5 (lower is better)
Translates to: VRYSFQSLVLCWVTF*QRELVDSLFDRHFQ
Trigger: CTGAAAGTGCCGATCAAACAGTGAGTCCACCAACTCCCTTTGCCAGAAGGTTACCCAGCACAGAACAAGACTCTGGAAGGAGTAACGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 90 bp GAGGCTGCAGACCGCCGGGCACAGGGCTGTGCTCAGGTTCTCTCATaGCTACCTTTGTTTTTGGTCCATGTAACTCAGAACAGTAAAATT +
Preference number: 5 (lower is better)
Translates to: EAADRRAQGCAQVLS*LPLFLVHVTQNSKI
Trigger: AATTTTACTGTTCTGAGTTACATGGACCAAAAACAAAGGTAGCCATGAGAGAACCTGAGCACAGCCCTGTGCCCGGCGGTCTGCAGCCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp GAGGGTGTGGCTGACAGGACTGATTCAGCCTGGCTGTCCTCATCATCGTCTTCAGGGGCCATATTTGTATaGGCTAGGCCTACAATATTG +
Preference number: 5 (lower is better)
Translates to: EGVADRTDSAWLSSSSSSGAIFV*ARPTIL
Trigger: CAATATTGTAGGCCTAGCCAATACAAATATGGCCCC...TGAAGACGATGATGAGGACAGCCAGGCTGAATCAGTCCTGTCAGCCACACCCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CAA 90 bp GTCTACAGACGGAATTGTGTCGTTTTCATCTCTCGCAGCACGCTGCCTGGCCTTTCCTGGTGGATGGACTaGTGGGGCCATATTTGTATT +
Preference number: 5 (lower is better)
Translates to: VYRRNCVVFISRSTLPGLSWWMD*WGHICI
Trigger: AATACAAATATGGCCCCACAAGTCCATCCACCAGGA...AAGGCCAGGCAGCGTGCTGCGAGAGATGAAAACGACACAATTCCGTCTGTAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS GCA 90 bp AGTAAAGTTTCAGCATTTGACATCCTCTTTATTATGTGCACAGGCTaGAGCTCCATGGCGCCCAGGTCATGCTGTCTCTCATCAGTGGCG +
Preference number: 5 (lower is better)
Translates to: SKVSAFDILFIMCTG*SSMAPRSCCLSSVA
Trigger: CGCCACTGATGAGAGACAGCATGACCTGGGCGCCATGGAGCTGCAGCCTGTGCACATAATAAAGAGGATGTCAAATGCTGAAACTTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 90 bp AAGTGCTTTGGGGGACTCGTGGGACAAGAACAAGCCACCAGCATCTaGTTGCAAGACAAGACCCAGTTTGATAGTATGTGCGTGGGATTT +
Preference number: 5 (lower is better)
Translates to: KCFGGLVGQEQATSI*LQDKTQFDSMCVGF
Trigger: AAATCCCACGCACATACTATCAAACTGGGTCTTGTCTTGCAACCAGATGCTGGTGGCTTGTTCTTGTCCCACGAGTCCCCCAAAGCACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 90 bp CTGGGCGTGTACCGTTCCTACGTGAGAGTCTTGCTTTCCTTCCAGTaGATTCATGTCGCCTTTCTGGTGGGAATTCTCATTAGTCTCCAA +
Preference number: 5 (lower is better)
Translates to: LGVYRSYVRVLLSFQ*IHVAFLVGILISLQ
Trigger: TTGGAGACTAATGAGAATTCCCACCAGAAAGGCGACATGAATCCACTGGAAGGAAAGCAAGACTCTCACGTAGGAACGGTACACGCCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 90 bp GTCCAGTACCAAGAACATGACTTTCATTTGCTGAAGAGTCTTCTATaGCTGCTTGTCTCACAAGTGTACGGGGATGCCCACTCTGGGGCA +
Preference number: 5 (lower is better)
Translates to: VQYQEHDFHLLKSLL*LLVSQVYGDAHSGA
Trigger: TGCCCCAGAGTGGGCATCCCCGTACACTTGTGAGACAAGCAGCCATAGAAGACTCTTCAGCAAATGAAAGTCATGTTCTTGGTACTGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 90 bp TCCAGGTCTCGATCTGGTTCTTCTGTGACCAAAATCTCTGGAACTTaGATGTTGTGCTGCCGGACAAGTCTTGAGGGCTGTCCTAACACA +
Preference number: 5 (lower is better)
Translates to: SRSRSGSSVTKISGT*MLCCRTSLEGCPNT
Trigger: TGTGTTAGGACAGCCCTCAAGACTTGTCCGGCAGCACAACATCCAAGTTCCAGAGATTTTGGTCACAGAAGAACCAGATCGAGACCTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp CATTTTACTCAGGCCATCAAGCCTTGCATGGTCACCTGCAGGGGCAGGTGGATTTGTCTACAGACGGAATaGTGTCGTTTTCATCTCTCG +
Preference number: 5 (lower is better)
Translates to: HFTQAIKPCMVTCRGRWICLQTE*CRFHLS
Trigger: CGAGAGATGAAAACGACACAATTCCGTCTGTAGACA...AATCCACCTGCCCCTGCAGGTGACCATGCAAGGCTTGATGGCCTGAGTAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CAA 90 bp GGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTGCTTTGGGAAGCTGGGCTAGGCCTACAATATaGACGGTTTCCATGCTTAAC +
Preference number: 5 (lower is better)
Translates to: GYRSLLGLCLACFALGSWARPTI*TVSMLN
Trigger: GTTAAGCATGGAAACCGTCAATATTGTAGGCCTAGC...CCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CAA 90 bp AAAGCAATCGGTGATCCTGACATCCTCGTCAGTACTCACAGGGTCCTGAAGGCTCTTGTGGGGCCATATTaGTATTGGCTAGGCCTACAA +
Preference number: 5 (lower is better)
Translates to: KAIGDPDILVSTHRVLKALVGPY*YWLGLQ
Trigger: TTGTAGGCCTAGCCAATACAAATATGGCCCCACAAG...AGCCTTCAGGACCCTGTGAGTACTGACGAGGATGTCAGGATCACCGATTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS TCA 90 bp GACCCTTCTCCACGGAACCCAGGACAACATGCTAAGCCTTTCTTCTaGACACCAAGTGCTGCTCTCATGCTCTTCCAAAATTCTTCAACC +
Preference number: 5 (lower is better)
Translates to: DPSPRNPGQHAKPFF*TPSAALMLFQNSST
Trigger: GGTTGAAGAATTTTGGAAGAGCATGAGAGCAGCACTTGGTGTTCAGAAGAAAGGCTTAGCATGTTGTCCTGGGTTCCGTGGAGAAGGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442081.6
CDS GCA 90 bp GGATCAGCGCCTTCGGATCTCCATCTACGCAGTTCAGATGGTTGCTaGAGAAACAAGGGCTTCTTTGGGGAGACAGATTCTTCAGATTTT +
Preference number: 5 (lower is better)
Translates to: GSAPSDLHLRSSDGC*RNKGFFGETDSSDF
Trigger: AAAATCTGAAGAATCTGTCTCCCCAAAGAAGCCCTTGTTTCTGCAGCAACCATCTGAACTGCGTAGATGGAGATCCGAAGGCGCTGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 90 bp CGATCTGGTTCTTCTGTGACCAAAATCTCTGGAACTTGGATGTTGTaGTGCCGGACAAGTCTTGAGGGCTGTCCTAACACATGTCGTTCA +
Preference number: 5 (lower is better)
Translates to: RSGSSVTKISGTWML*CRTSLEGCPNTCRS
Trigger: TGAACGACATGTGTTAGGACAGCCCTCAAGACTTGTCCGGCAGCACAACATCCAAGTTCCAGAGATTTTGGTCACAGAAGAACCAGATCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 90 bp ATGGCCTTTGGACTGTCAGTTCTTAAGGGGGACACAGTGACATGGTaGACCACAACTTTCGGTAACTCTGTCACAGCTTGTGATTCTGCA +
Preference number: 5 (lower is better)
Translates to: MAFGLSVLKGDTVTW*TTTFGNSVTACDSA
Trigger: TGCAGAATCACAAGCTGTGACAGAGTTACCGAAAGTTGTGGTCCACCATGTCACTGTGTCCCCCTTAAGAACTGACAGTCCAAAGGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 90 bp TCCATGGCCTTTGGACTGTCAGTTCTTAAGGGGGACACAGTGACATaGTGGACCACAACTTTCGGTAACTCTGTCACAGCTTGTGATTCT +
Preference number: 5 (lower is better)
Translates to: SMAFGLSVLKGDTVT*WTTTFGNSVTACDS
Trigger: AGAATCACAAGCTGTGACAGAGTTACCGAAAGTTGTGGTCCACCATGTCACTGTGTCCCCCTTAAGAACTGACAGTCCAAAGGCCATGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 90 bp CGAGAAGGTGAAGATGGAGGCTGCAATTCAGTAAGTGGTGTTGTCTaGGGTGGGGTGATGCTTCCACAATCGAATGATTTGCTTCTGAGA +
Preference number: 5 (lower is better)
Translates to: REGEDGGCNSVSGVV*GGVMLPQSNDLLLR
Trigger: TCTCAGAAGCAAATCATTCGATTGTGGAAGCATCACCCCACCCCAGACAACACCACTTACTGAATTGCAGCCTCCATCTTCACCTTCTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp GAGGGTGTGGCTGACAGGACTGATTCAGCCTGGCTGTCCTCATCATCGTCTTCATGCTTTTCCACTTGCTaGAATAGACCAATAAGTCTG +
Preference number: 5 (lower is better)
Translates to: EGVADRTDSAWLSSSSSSCFSTC*NRPISL
Trigger: CAGACTTATTGGTCTATTCAAGCAAGTGGAAAAGCA...TGAAGACGATGATGAGGACAGCCAGGCTGAATCAGTCCTGTCAGCCACACCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CAA 90 bp GGCTACAGAAGTCTGCTTGGGTTGTGTCTCGCATGCTTTGCTTTGGGAAGCTGGATAAAATCCATCAGGTaGCTATCACAAGCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: GYRSLLGLCLACFALGSWIKSIR*LSQACP
Trigger: AGGACAGGCTTGTGATAGCAACCTGATGGATTTTAT...CCAGCTTCCCAAAGCAAAGCATGCGAGACACAACCCAAGCAGACTTCTGTAGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS TCA 90 bp CTCATCCAGGGACTGTCCAGTACCAAGAACATGACTTTCATTTGCTaGAGAGTCTTCTATGGCTGCTTGTCTCACAAGTGTACGGGGATG +
Preference number: 5 (lower is better)
Translates to: LIQGLSSTKNMTFIC*RVFYGCLSHKCTGM
Trigger: CATCCCCGTACACTTGTGAGACAAGCAGCCATAGAAGACTCTTCAGCAAATGAAAGTCATGTTCTTGGTACTGGACAGTCCCTGGATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 90 bp CCTCGTCTTGACAGTGAGGTTCTCCGCGGCTTCACACTATCCAGTTaGTTGTCATCTACCAAAGCTTCATTGTCTGAGATAAGCTTCGAT +
Preference number: 5 (lower is better)
Translates to: PRLDSEVLRGFTLSS*LSSTKASLSEISFD
Trigger: ATCGAAGCTTATCTCAGACAATGAAGCTTTGGTAGATGACAAGCAACTGGATAGTGTGAAGCCGCGGAGAACCTCACTGTCAAGACGAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 90 bp TCTGGTTCTTCTGTGACCAAAATCTCTGGAACTTGGATGTTGTGCTaGCGGACAAGTCTTGAGGGCTGTCCTAACACATGTCGTTCACTT +
Preference number: 5 (lower is better)
Translates to: SGSSVTKISGTWMLC*RTSLEGCPNTCRSL
Trigger: AAGTGAACGACATGTGTTAGGACAGCCCTCAAGACTTGTCCGGCAGCACAACATCCAAGTTCCAGAGATTTTGGTCACAGAAGAACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 90 bp GATAAAACAGAATTTTTATCTGGCTTGCTACCCTGCGTAGACACTTaGAGAGATAGCTGTGTGCTCTGGTGGCTAGGCGGTGCATGGATT +
Preference number: 5 (lower is better)
Translates to: DKTEFLSGLLPCVDT*RDSCVLWWLGGAWI
Trigger: AATCCATGCACCGCCTAGCCACCAGAGCACACAGCTATCTCTGCAAGTGTCTACGCAGGGTAGCAAGCCAGATAAAAATTCTGTTTTATC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp ATTTGGCCGATAGGAATACATGGCACAACACTGCTTAATTCAGCCACTCCAGCAATAAGGTGTCCTCGATaGCTGCTGGGAATGCAAAGG +
Preference number: 5 (lower is better)
Translates to: IWPIGIHGTTLLNSATPAIRCPR*LLGMQR
Trigger: CCTTTGCATTCCCAGCAGCAATCGAGGACACCTTAT...TGCTGGAGTGGCTGAATTAAGCAGTGTTGTGCCATGTATTCCTATCGGCCAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS TCA 90 bp GAGTGGATTTGGATTACTGGCGCTTACTGTCCAATCAGTATAGGCTaGAGTTTTCTGGTCCTTCTGAGGCAAATGCAACGACTTCTGCCT +
Preference number: 5 (lower is better)
Translates to: EWIWITGAYCPISIG*SFLVLLRQMQRLLP
Trigger: AGGCAGAAGTCGTTGCATTTGCCTCAGAAGGACCAGAAAACTTCAGCCTATACTGATTGGACAGTAAGCGCCAGTAATCCAAATCCACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 90 bp TTAGAAGACCCAGATAAAACAGAATTTTTATCTGGCTTGCTACCCTaGGTAGACACTTGCAGAGATAGCTGTGTGCTCTGGTGGCTAGGC +
Preference number: 5 (lower is better)
Translates to: LEDPDKTEFLSGLLP*VDTCRDSCVLWWLG
Trigger: GCCTAGCCACCAGAGCACACAGCTATCTCTGCAAGTGTCTACGCAGGGTAGCAAGCCAGATAAAAATTCTGTTTTATCTGGGTCTTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 90 bp GAGCAAGTGCAACTTTTGTGGGCAAACCGAGTGGATTTGGATTACTaGCGCTTACTGTCCAATCAGTATAGGCTGAAGTTTTCTGGTCCT +
Preference number: 5 (lower is better)
Translates to: EQVQLLWANRVDLDY*RLLSNQYRLKFSGP
Trigger: AGGACCAGAAAACTTCAGCCTATACTGATTGGACAGTAAGCGCCAGTAATCCAAATCCACTCGGTTTGCCCACAAAAGTTGCACTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGGGCAGAACGTCCATaGGGTCCGTGTGTACCCCAG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNWAERP*GPCVPQ
Trigger: CTGGGGTACACACGGACCCAATGGACGTTCTGCCCA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCAGGCCATCAAGCCTaGCATGGTCACCTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSGHQA*HGHLQG
Trigger: CCCCTGCAGGTGACCATGCAAGGCTTGATGGCCTGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 90 bp TTTTACTTGACAAGGAACTTGAGTCACATTGTTCATCGAGGTCACTaGATTTGGCAGGATCAGCGCCTTCGGATCTCCATCTACGCAGTT +
Preference number: 5 (lower is better)
Translates to: FYLTRNLSHIVHRGH*IWQDQRLRISIYAV
Trigger: AACTGCGTAGATGGAGATCCGAAGGCGCTGATCCTGCCAAATTCAGTGACCTCGATGAACAATGTGACTCAAGTTCCTTGTCAAGTAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 90 bp TGCGTGCAATTAATCTGTTCTGATGCAGTACGCCTCATTTCCCGGTaGCATCCAGGAACATTCAGAGTATTCAAGCCAGCTGGAATCATA +
Preference number: 5 (lower is better)
Translates to: CVQLICSDAVRLISR*HPGTFRVFKPAGII
Trigger: TATGATTCCAGCTGGCTTGAATACTCTGAATGTTCCTGGATGTCACCGGGAAATGAGGCGTACTGCATCAGAACAGATTAATTGCACGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 90 bp CTTGATTTTAGTAAAGTTTCAGCATTTGACATCCTCTTTATTATGTaGACAGGCTGCAGCTCCATGGCGCCCAGGTCATGCTGTCTCTCA +
Preference number: 5 (lower is better)
Translates to: LDFSKVSAFDILFIM*TGCSSMAPRSCCLS
Trigger: TGAGAGACAGCATGACCTGGGCGCCATGGAGCTGCAGCCTGTGCACATAATAAAGAGGATGTCAAATGCTGAAACTTTACTAAAATCAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 90 bp CCTCTATGTCTAAAGAGGCTGAGAAACTTGAAGTGTGAGATAAACTaGTCTCCCTACTTAGACTCCTGGAGAGAGTGGAATCAAAGCTCG +
Preference number: 5 (lower is better)
Translates to: PLCLKRLRNLKCEIN*SPYLDSWREWNQSS
Trigger: CGAGCTTTGATTCCACTCTCTCCAGGAGTCTAAGTAGGGAGAGCAGTTTATCTCACACTTCAAGTTTCTCAGCCTCTTTAGACATAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGCCTGCTCAGGGAGTaGGTGTGCTGGATGACAGAG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGLLRE*VCWMTE
Trigger: CTCTGTCATCCAGCACACCAACTCCCTGAGCAGGCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGGGCAGAACGTCCATaGGGTCCGTGTGTACCCCAG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNWAERP*GPCVPQ
Trigger: CTGGGGTACACACGGACCCAATGGACGTTCTGCCCA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCCTGGCACGCGGATTaGGCCGATAGGAATACATGG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNAWHAD*ADRNTW
Trigger: CCATGTATTCCTATCGGCCAAATCCGCGTGCCAGGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCAGGCCATCAAGCCTaGCATGGTCACCTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSGHQA*HGHLQG
Trigger: CCCCTGCAGGTGACCATGCAAGGCTTGATGGCCTGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGGGCTTCACGTGATTaGCCGAGGCAGCCTTCTCTG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNWASRD*PRQPSL
Trigger: CAGAGAAGGCTGCCTCGGCAAATCACGTGAAGCCCA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 90 bp AAGTGTGAGATAAACTGCTCTCCCTACTTAGACTCCTGGAGAGAGTaGAATCAAAGCTCGATTCTGTTGAGGAATGTTCTATCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: KCEINCSPYLDSWRE*NQSSILLRNVLSQP
Trigger: TGGCTGAGATAGAACATTCCTCAACAGAATCGAGCTTTGATTCCACTCTCTCCAGGAGTCTAAGTAGGGAGAGCAGTTTATCTCACACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 90 bp CTAAAGGTCTCACGTCTGTTGCACAAACAGCTCCATTTTCATCTTTaGCCCGCTTCTGGTGCTTTTCCATGGCAATGTCTAAACTATTTG +
Preference number: 5 (lower is better)
Translates to: LKVSRLLHKQLHFHL*PASGAFPWQCLNYL
Trigger: CAAATAGTTTAGACATTGCCATGGAAAAGCACCAGAAGCGGGCCAAAGATGAAAATGGAGCTGTTTGTGCAACAGACGTGAGACCTTTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 90 bp CATGTAAAGTTGGTTGTAGTTTTCAGGCTAGGGAAAGCCAGCTGCTaGGTGTCCTTGATGTTAAACAATGAAAGAGAAGTGACTGGCTGT +
Preference number: 5 (lower is better)
Translates to: HVKLVVVFRLGKASC*VSLMLNNEREVTGC
Trigger: ACAGCCAGTCACTTCTCTTTCATTGTTTAACATCAAGGACACCCAGCAGCTGGCTTTCCCTAGCCTGAAAACTACAACCAACTTTACATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCGAGGTCACTGAATTaGGCAGGATCAGCGCCTTCG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSRSLN*AGSAPS
Trigger: CGAAGGCGCTGATCCTGCCAAATTCAGTGACCTCGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCTCCTCAAGTGTTTTaGTGGCCAAAGGTGGGCGCA +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNAPQVF*WPKVGA
Trigger: TGCGCCCACCTTTGGCCACAAAAACACTTGAGGAGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCAATGCTTCCTCGTCTaGACAGTGAGGTTCTCCGCG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNQCFLV*TVRFSA
Trigger: CGCGGAGAACCTCACTGTCAAGACGAGGAAGCATTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCTTGTGCCAGTGCCTaGCTCCTCACTGACATGGCT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPCASA*LLTDMA
Trigger: AGCCATGTCAGTGAGGAGCAAGGCACTGGCACAAGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGCTTGTCAAATGAGTaGGGCCTGCTCAGGGAGTTG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGLSNE*GLLREL
Trigger: CAACTCCCTGAGCAGGCCCAACTCATTTGACAAGCC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCTGCCGGACAAGTCTaGAGGGCTGTCCTAACACAT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNAAGQV*RAVLTH
Trigger: ATGTGTTAGGACAGCCCTCAAGACTTGTCCGGCAGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCCTGGCACGCGGATTaGGCCGATAGGAATACATGG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNAWHAD*ADRNTW
Trigger: CCATGTATTCCTATCGGCCAAATCCGCGTGCCAGGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp CATTCAGAGCCAGTCCTGGTGGATGGACTTGTGGGGCCATATTTGTATTGGCTACATTTGACTTATATCTaGCTTAAGCTGCTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: HSEPVLVDGLVGPYLYWLHLTYI*LKLLFH
Trigger: GTGGAAAAGCAGCTTAAGCAAGATATAAGTCAAATG...TAGCCAATACAAATATGGCCCCACAAGTCCATCCACCAGGACTGGCTCTGAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS TCA 90 bp CTTCACACTATCCAGTTGCTTGTCATCTACCAAAGCTTCATTGTCTaGGATAAGCTTCGATATCCGCTCCTCAAGTGTTTTTGTGGCCAA +
Preference number: 5 (lower is better)
Translates to: LHTIQLLVIYQSFIV*DKLRYPLLKCFCGQ
Trigger: TTGGCCACAAAAACACTTGAGGAGCGGATATCGAAGCTTATCTCAGACAATGAAGCTTTGGTAGATGACAAGCAACTGGATAGTGTGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 90 bp TTAGAAACGTCCTCTATGTCTAAAGAGGCTGAGAAACTTGAAGTGTaGGATAAACTGCTCTCCCTACTTAGACTCCTGGAGAGAGTGGAA +
Preference number: 5 (lower is better)
Translates to: LETSSMSKEAEKLEV*DKLLSLLRLLERVE
Trigger: TTCCACTCTCTCCAGGAGTCTAAGTAGGGAGAGCAGTTTATCTCACACTTCAAGTTTCTCAGCCTCTTTAGACATAGAGGACGTTTCTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCGAGGTCACTGAATTaGGCAGGATCAGCGCCTTCG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSRSLN*AGSAPS
Trigger: CGAAGGCGCTGATCCTGCCAAATTCAGTGACCTCGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTTTCCTTGCTGCTCTaGGGAGTAATCGGTAGCCTG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLSLLL*GVIGSL
Trigger: CAGGCTACCGATTACTCCCAAGAGCAGCAAGGAAAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCAATGCTTCCTCGTCTaGACAGTGAGGTTCTCCGCG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNQCFLV*TVRFSA
Trigger: CGCGGAGAACCTCACTGTCAAGACGAGGAAGCATTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGTCTTCTATGGCTGCTaGTCTCACAAGTGTACGGGG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNVFYGC*SHKCTG
Trigger: CCCCGTACACTTGTGAGACAAGCAGCCATAGAAGAC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTCTATATGTGGGCCTaGTGCCAGTGCCTTGCTCCT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNFYMWA*CQCLAP
Trigger: AGGAGCAAGGCACTGGCACAAGGCCCACATATAGAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATGATGGTCGACAGCTaGGGATCCATGGTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNMMVDS*GSMVCS
Trigger: TGAGCAGACCATGGATCCCAAGCTGTCGACCATCAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCTGCCGGACAAGTCTaGAGGGCTGTCCTAACACAT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNAAGQV*RAVLTH
Trigger: ATGTGTTAGGACAGCCCTCAAGACTTGTCCGGCAGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCTACAGAAGTCTGCTaGGGTTGTGTCTCGCATGCT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNATEVC*GCVSHA
Trigger: AGCATGCGAGACACAACCCAAGCAGACTTCTGTAGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 90 bp CAAGTTTGGCATTCTCTTGATTTTGCAGATTTGTCAGTGATCCTGTaGAACCTGAACACCCCGGAAGCTGTTGATTATGTTGGTTGGATT +
Preference number: 5 (lower is better)
Translates to: QVWHSLDFADLSVIL*NLNTPEAVDYVGWI
Trigger: AATCCAACCAACATAATCAACAGCTTCCGGGGTGTTCAGGTTTCACAGGATCACTGACAAATCTGCAAAATCAAGAGAATGCCAAACTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 90 bp GAATGCACAGGATTAGAAGAGCAAGATGGGCCTGAAGTGAAAACCTaGCAATGCAATTGGTATTTGGGAGCAAAGCAATCCTCACTTTTA +
Preference number: 5 (lower is better)
Translates to: ECTGLEEQDGPEVKT*QCNWYLGAKQSSLL
Trigger: TAAAAGTGAGGATTGCTTTGCTCCCAAATACCAATTGCATTGTCAGGTTTTCACTTCAGGCCCATCTTGCTCTTCTAATCCTGTGCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATACGCAGTTCAGATGGTaGCTGCAGAAACAAGGGCTT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNTQFRW*LQKQGL
Trigger: AAGCCCTTGTTTCTGCAGCAACCATCTGAACTGCGT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGAGAAGCTGACTGCATaGCCCCTTGCTCATTCTTCT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNEKLTA*PLAHSS
Trigger: AGAAGAATGAGCAAGGGGCAATGCAGTCAGCTTCTC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCCACCAGCATCTGGTaGCAAGACAAGACCCAGTTT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNATSIW*QDKTQF
Trigger: AAACTGGGTCTTGTCTTGCAACCAGATGCTGGTGGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGGGATCCATGGCCTTaGGACTGTCAGTTCTTAAGG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNWDPWP*DCQFLR
Trigger: CCTTAAGAACTGACAGTCCAAAGGCCATGGATCCCA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGGTGGACTCACTGTTaGATCGGCACTTTCAGAACG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNWWTHC*IGTFRT
Trigger: CGTTCTGAAAGTGCCGATCAAACAGTGAGTCCACCA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGTCTTCTATGGCTGCTaGTCTCACAAGTGTACGGGG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNVFYGC*SHKCTG
Trigger: CCCCGTACACTTGTGAGACAAGCAGCCATAGAAGAC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTCTATATGTGGGCCTaGTGCCAGTGCCTTGCTCCT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNFYMWA*CQCLAP
Trigger: AGGAGCAAGGCACTGGCACAAGGCCCACATATAGAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATGATGGTCGACAGCTaGGGATCCATGGTCTGCTCA +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNMMVDS*GSMVCS
Trigger: TGAGCAGACCATGGATCCCAAGCTGTCGACCATCAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTCTGCAGTTCTATCTaGTCCTGGGCTGCTGAACTT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLCSSI*SWAAEL
Trigger: AAGTTCAGCAGCCCAGGACAAGATAGAACTGCAGAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCAAAAGGCTCAGGCTaGTCAAATGAGTTGGGCCTG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSKGSG*SNELGL
Trigger: CAGGCCCAACTCATTTGACAAGCCTGAGCCTTTTGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCTCCATTTTCATCTTaGGCCCGCTTCTGGTGCTTT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNAPFSS*ARFWCF
Trigger: AAAGCACCAGAAGCGGGCCAAAGATGAAAATGGAGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCAAACCGAGTGGATTaGGATTACTGGCGCTTACTG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNANRVD*DYWRLL
Trigger: CAGTAAGCGCCAGTAATCCAAATCCACTCGGTTTGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGAGCAAGTGCAACTTTaGTGGGCAAACCGAGTGGAT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNEQVQL*WANRVD
Trigger: ATCCACTCGGTTTGCCCACAAAAGTTGCACTTGCTC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATAAGGTGTCCTCGATaGCTGCTGGGAATGCAAAGG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNIRCPR*LLGMQR
Trigger: CCTTTGCATTCCCAGCAGCAATCGAGGACACCTTAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGTGTCTCGCATGCTTaGCTTTGGGAAGCTGGCATT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNCVSHA*LWEAGI
Trigger: AATGCCAGCTTCCCAAAGCAAAGCATGCGAGACACA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGAAGTCTGCTTGGGTaGTGTCTCGCATGCTTTGCT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRSLLG*CLACFA
Trigger: AGCAAAGCATGCGAGACACAACCCAAGCAGACTTCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TCTCTGTTTTTCATCTTTAGTCTTAAAGGAGAAGTTACAGTAAGTGCAGTGGTAGCTACAGAAGTCTGCTaGGGTTGTGTCTCGCATGCT +
Preference number: 5 (lower is better)
Translates to: SLFFIFSLKGEVTVSAVVATEVC*GCVSHA
Trigger: AGCATGCGAGACACAACCCAAGCAGACTTCTGTAGC...TACCACTGCACTTACTGTAACTTCTCCTTTAAGACTAAAGATGAAAAACAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000399469.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCTACAGAAGTCTGCTaGGGTTGTGTCTCGCATGCT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNATEVC*GCVSHA
Trigger: AGCATGCGAGACACAACCCAAGCAGACTTCTGTAGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGATCCCTCCTTCACTaGACAACCCCAAACACAAAC +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGSLLH*TTPNTN
Trigger: GTTTGTGTTTGGGGTTGTCAAGTGAAGGAGGGATCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGAAACAAGGGCTTCTTaGGGGAGACAGATTCTTCAG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNETRAS*GRQILQ
Trigger: CTGAAGAATCTGTCTCCCCAAAGAAGCCCTTGTTTC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACACGCAGTTCAGATGGTaGCTGCAGAAACAAGGGCTT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNTQFRW*LQKQGL
Trigger: AAGCCCTTGTTTCTGCAGCAACCATCTGAACTGCGT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGAGAAGCTGACTGCATaGCCCCTTGCTCATTCTTCT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNEKLTA*PLAHSS
Trigger: AGAAGAATGAGCAAGGGGCAATGCAGTCAGCTTCTC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGGGATCCATGGCCTTaGGACTGTCAGTTCTTAAGG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNWDPWP*DCQFLR
Trigger: CCTTAAGAACTGACAGTCCAAAGGCCATGGATCCCA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTAGAAAGTTCAGGCTaGGGATCCATGGCCTTTGGA +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLESSG*GSMAFG
Trigger: TCCAAAGGCCATGGATCCCAAGCCTGAACTTTCTAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCCTACGTGAGAGTCTaGCTTTCCTTCCAGTGGATT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSYVRV*LSFQWI
Trigger: AATCCACTGGAAGGAAAGCAAGACTCTCACGTAGGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGGTGGACTCACTGTTaGATCGGCACTTTCAGAACG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNWWTHC*IGTFRT
Trigger: CGTTCTGAAAGTGCCGATCAAACAGTGAGTCCACCA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTCTGGCAAAGGGAGTaGGTGGACTCACTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNFWQRE*VDSLFD
Trigger: ATCAAACAGTGAGTCCACCAACTCCCTTTGCCAGAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTATCAGAGCTTGAACTaGTTCTCCGTCCCACTGGTT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNYQSLN*FSVPLV
Trigger: AACCAGTGGGACGGAGAACAAGTTCAAGCTCTGATA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTTCACACTCAAACATaGTCCCTCGCCCTTGATGAG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNFHTQT*SLALDE
Trigger: CTCATCAAGGGCGAGGGACAATGTTTGAGTGTGAAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTCTGCAGTTCTATCTaGTCCTGGGCTGCTGAACTT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLCSSI*SWAAEL
Trigger: AAGTTCAGCAGCCCAGGACAAGATAGAACTGCAGAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTCTTGATCATGGCATaGAGCTTCCAGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNFLIMA*SFQVSI
Trigger: GATCGAGACCTGGAAGCTCAATGCCATGATCAAGAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCGGAGCCTTTTCTTTTaGGGTGGCAGTTTCTCTGTT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRSLFF*GGSFSV
Trigger: AACAGAGAAACTGCCACCCAAAAAGAAAAGGCTCCG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCTCCATTTTCATCTTaGGCCCGCTTCTGGTGCTTT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNAPFSS*ARFWCF
Trigger: AAAGCACCAGAAGCGGGCCAAAGATGAAAATGGAGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCAAACCGAGTGGATTaGGATTACTGGCGCTTACTG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNANRVD*DYWRLL
Trigger: CAGTAAGCGCCAGTAATCCAAATCCACTCGGTTTGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGAGCAAGTGCAACTTTaGTGGGCAAACCGAGTGGAT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNEQVQL*WANRVD
Trigger: ATCCACTCGGTTTGCCCACAAAAGTTGCACTTGCTC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATAAGGTGTCCTCGATaGCTGCTGGGAATGCAAAGG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNIRCPR*LLGMQR
Trigger: CCTTTGCATTCCCAGCAGCAATCGAGGACACCTTAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTTGTGGGGCCATATTaGTATTGGCTAGGCCTACAA +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLVGPY*YWLGLQ
Trigger: TTGTAGGCCTAGCCAATACAAATATGGCCCCACAAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGTGTCTCGCATGCTTaGCTTTGGGAAGCTGGCATT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNCVSHA*LWEAGI
Trigger: AATGCCAGCTTCCCAAAGCAAAGCATGCGAGACACA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 90 bp GTGATAGGTAAACAGTCAAGTGAAGGTACAGACAGAAGAAACACTTaGTTTGATTTTTCAGTAGGGGTGAAAGGTGACTTCGGTATATCA +
Preference number: 5 (lower is better)
Translates to: VIGKQSSEGTDRRNT*FDFSVGVKGDFGIS
Trigger: TGATATACCGAAGTCACCTTTCACCCCTACTGAAAAATCAAAGCAAGTGTTTCTTCTGTCTGTACCTTCACTTGACTGTTTACCTATCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGAAACAAGGGCTTCTTaGGGGAGACAGATTCTTCAG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNETRAS*GRQILQ
Trigger: CTGAAGAATCTGTCTCCCCAAAGAAGCCCTTGTTTC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCAGTCCTGGTTTTACTaGACAAGGAACTTGAGTCAC +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNQSWFY*TRNLSH
Trigger: GTGACTCAAGTTCCTTGTCAAGTAAAACCAGGACTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCAGTTCTGGCTCCATaGCTTTCAGTAAGACATCGA +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSVLAP*LSVRHR
Trigger: TCGATGTCTTACTGAAAGCAATGGAGCCAGAACTGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCTGTGAAGTCTGATTaGGGGCATCCATTGAACTGT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPVKSD*GHPLNC
Trigger: ACAGTTCAATGGATGCCCCAAATCAGACTTCACAGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATACACCCCGGAAGCTGTaGATTATGTTGGTTGGATTT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNTPRKL*IMLVGF
Trigger: AAATCCAACCAACATAATCAACAGCTTCCGGGGTGT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAAGACAAGACCCAGTTaGATAGTATGTGCGTGGGAT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNKTRPS*IVCAWD
Trigger: ATCCCACGCACATACTATCAAACTGGGTCTTGTCTT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAAGGTCCTTCTGCTTTaGTGCACTAGAAAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNKVLLL*CTRKFR
Trigger: CCTGAACTTTCTAGTGCACAAAAGCAGAAGGACCTT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAAAGTGGCTGTACGTTaGTCACCTGAAGGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNKVAVR*SPEGPS
Trigger: AGAAGGACCTTCAGGTGACAAACGTACAGCCACTTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCCTACGTGAGAGTCTaGCTTTCCTTCCAGTGGATT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSYVRV*LSFQWI
Trigger: AATCCACTGGAAGGAAAGCAAGACTCTCACGTAGGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTCTGGCAAAGGGAGTaGGTGGACTCACTGTTTGAT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNFWQRE*VDSLFD
Trigger: ATCAAACAGTGAGTCCACCAACTCCCTTTGCCAGAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTTCACACTATCCAGTaGCTTGTCATCTACCAAAGC +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLHTIQ*LVIYQS
Trigger: GCTTTGGTAGATGACAAGCAACTGGATAGTGTGAAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTATCAGAGCTTGAACTaGTTCTCCGTCCCACTGGTT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNYQSLN*FSVPLV
Trigger: AACCAGTGGGACGGAGAACAAGTTCAAGCTCTGATA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTTCACACTCAAACATaGTCCCTCGCCCTTGATGAG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNFHTQT*SLALDE
Trigger: CTCATCAAGGGCGAGGGACAATGTTTGAGTGTGAAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGGGTGACTTTCCTCTaGGGAGATTCCTATCACTTT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNRVTFL*GDSYHF
Trigger: AAAGTGATAGGAATCTCCCAAGAGGAAAGTCACCCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATACACATGTCGTTCACTaGGACTCTTTCTGGAGCTTT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNTHVVH*DSFWSF
Trigger: AAAGCTCCAGAAAGAGTCCAAGTGAACGACATGTGT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTCTTGATCATGGCATaGAGCTTCCAGGTCTCGATC +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNFLIMA*SFQVSI
Trigger: GATCGAGACCTGGAAGCTCAATGCCATGATCAAGAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCCACAATCGAATGATTaGCTTCTGAGATCAGAGACC +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNPQSND*LLRSET
Trigger: GGTCTCTGATCTCAGAAGCAAATCATTCGATTGTGG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGGAAGAGCAGTATTTaGGAAAGATGTTGGGTGTAC +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGKSSI*ERCWVY
Trigger: GTACACCCAACATCTTTCCAAAATACTGCTCTTCCC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGAATTTTTATCTGGCTaGCTACCCTGCGTAGACACT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNEFLSG*LPCVDT
Trigger: AGTGTCTACGCAGGGTAGCAAGCCAGATAAAAATTC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATTCCTTCTCTGGGTTaGGCAAAGCATTCTGATGAC +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNIPSLG*AKHSDD
Trigger: GTCATCAGAATGCTTTGCCAAACCCAGAGAAGGAAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAAGGTCTCACGTCTGTaGCACAAACAGCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNKVSRL*HKQLHF
Trigger: AAAATGGAGCTGTTTGTGCAACAGACGTGAGACCTT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTGTTGACTTTGCTCTaGGATGTTCACTTTGTCACC +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLLTLL*DVHFVT
Trigger: GGTGACAAAGTGAACATCCAAGAGCAAAGTCAACAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGACTGGCTGTTGACTTaGCTCTTGGATGTTCACTTT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNDWLLT*LLDVHF
Trigger: AAAGTGAACATCCAAGAGCAAAGTCAACAGCCAGTC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCGTCTTCATTTTCATaGTCATCCTCATCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSSSFS*SSSSGP
Trigger: TGGCCCAGATGAGGATGACAATGAAAATGAAGACGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGTCTACAGACGGAATaGTGTCGTTTTCATCTCTCG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNCLQTE*CRFHLS
Trigger: CGAGAGATGAAAACGACACAATTCCGTCTGTAGACA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGCTAGGCCTACAATATaGACGGTTTCCATGCTTAAC +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNARPTI*TVSMLN
Trigger: GTTAAGCATGGAAACCGTCAATATTGTAGGCCTAGC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGGGCCATATTTGTATaGGCTAGGCCTACAATATTG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGAIFV*ARPTIL
Trigger: CAATATTGTAGGCCTAGCCAATACAAATATGGCCCC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTTGTGGGGCCATATTaGTATTGGCTAGGCCTACAA +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLVGPY*YWLGLQ
Trigger: TTGTAGGCCTAGCCAATACAAATATGGCCCCACAAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCCTGGTGGATGGACTaGTGGGGCCATATTTGTATT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSWWMD*WGHICI
Trigger: AATACAAATATGGCCCCACAAGTCCATCCACCAGGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 90 bp ACTTTGCTCTTGGATGTTCACTTTGTCACCTTGATTTTTAACCCCTaGAGACTTCCTTTCTTGGTTATTGTCTGTACATTTCAAAGGAGA +
Preference number: 5 (lower is better)
Translates to: TLLLDVHFVTLIFNP*RLPFLVIVCTFQRR
Trigger: TCTCCTTTGAAATGTACAGACAATAACCAAGAAAGGAAGTCTCCAGGGGTTAAAAATCAAGGTGACAAAGTGAACATCCAAGAGCAAAGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCAGCTACGATCTTTTaGCGTTTCACACCTTTAAGG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSATIF*RFTPLR
Trigger: CCTTAAAGGTGTGAAACGCAAAAAGATCGTAGCTGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCAGTCCTGGTTTTACTaGACAAGGAACTTGAGTCAC +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNQSWFY*TRNLSH
Trigger: GTGACTCAAGTTCCTTGTCAAGTAAAACCAGGACTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGAGATGCATTCGCTATaGTCAGTCCTGGTTTTACTT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNEMHSL*SVLVLL
Trigger: AAGTAAAACCAGGACTGACAATAGCGAATGCATCTC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCAGTTCTGGCTCCATaGCTTTCAGTAAGACATCGA +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSVLAP*LSVRHR
Trigger: TCGATGTCTTACTGAAAGCAATGGAGCCAGAACTGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACACACCCCGGAAGCTGTaGATTATGTTGGTTGGATTT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNTPRKL*IMLVGF
Trigger: AAATCCAACCAACATAATCAACAGCTTCCGGGGTGT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATCCATTTGCTGGTTTaGAGGAGTAACCTGAGATCT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNIHLLV*RSNLRS
Trigger: AGATCTCAGGTTACTCCTCAAAACCAGCAAATGGAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCATTTGCTCTACGCTTaGATTAACAACAGAGGCAAC +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNHLLYA*INNRGN
Trigger: GTTGCCTCTGTTGTTAATCAAAGCGTAGAGCAAATG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAAGGTCCTTCTGCTTTaGTGCACTAGAAAGTTCAGG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNKVLLL*CTRKFR
Trigger: CCTGAACTTTCTAGTGCACAAAAGCAGAAGGACCTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATACACTATCCAGTTGCTaGTCATCTACCAAAGCTTCA +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNTLSSC*SSTKAS
Trigger: TGAAGCTTTGGTAGATGACAAGCAACTGGATAGTGT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTTCACACTATCCAGTaGCTTGTCATCTACCAAAGC +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLHTIQ*LVIYQS
Trigger: GCTTTGGTAGATGACAAGCAACTGGATAGTGTGAAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGGCTACCTTTGTTTTaGGTCCATGTAACTCAGAAC +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNWLPLF*VHVTQN
Trigger: GTTCTGAGTTACATGGACCAAAAACAAAGGTAGCCA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCTCTCATGGCTACCTTaGTTTTTGGTCCATGTAACT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNLSWLP*FLVHVT
Trigger: AGTTACATGGACCAAAAACAAAGGTAGCCATGAGAG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGGCCTTCAGAACTTTTaGGAGATGTTCCACTTTCAT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNGLQNF*EMFHFH
Trigger: ATGAAAGTGGAACATCTCCAAAAAGTTCTGAAGGCC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCTCTGTTGGCAATTTaGACAAGGTTTCACTACGCT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSLLAI*TRFHYA
Trigger: AGCGTAGTGAAACCTTGTCAAAATTGCCAACAGAGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGTGGCAGTTTCTCTGTaGGCAATTTTGACAAGGTTT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNVAVSL*AILTRF
Trigger: AAACCTTGTCAAAATTGCCAACAGAGAAACTGCCAC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCAAAGCTCGATTCTGTaGAGGAATGTTCTATCTCAG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNQSSIL*RNVLSQ
Trigger: CTGAGATAGAACATTCCTCAACAGAATCGAGCTTTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAAGAGGCTGAGAAACTaGAAGTGTGAGATAAACTGC +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNKRLRN*KCEINC
Trigger: GCAGTTTATCTCACACTTCAAGTTTCTCAGCCTCTT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCCACAATCGAATGATTaGCTTCTGAGATCAGAGACC +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNPQSND*LLRSET
Trigger: GGTCTCTGATCTCAGAAGCAAATCATTCGATTGTGG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGGAAGAGCAGTATTTaGGAAAGATGTTGGGTGTAC +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGKSSI*ERCWVY
Trigger: GTACACCCAACATCTTTCCAAAATACTGCTCTTCCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGAATTTTTATCTGGCTaGCTACCCTGCGTAGACACT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNEFLSG*LPCVDT
Trigger: AGTGTCTACGCAGGGTAGCAAGCCAGATAAAAATTC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAACCTGACAATGCAATaGGTATTTGGGAGCAAAGCA +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNNLTMQ*VFGSKA
Trigger: TGCTTTGCTCCCAAATACCAATTGCATTGTCAGGTT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGTTGGCACAGAATTTaGTTCTTCACTGATTGGCAC +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNCWHRI*FFTDWH
Trigger: GTGCCAATCAGTGAAGAACAAAATTCTGTGCCAACA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATTCCTTCTCTGGGTTaGGCAAAGCATTCTGATGAC +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNIPSLG*AKHSDD
Trigger: GTCATCAGAATGCTTTGCCAAACCCAGAGAAGGAAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAAGGTCTCACGTCTGTaGCACAAACAGCTCCATTTT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNKVSRL*HKQLHF
Trigger: AAAATGGAGCTGTTTGTGCAACAGACGTGAGACCTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGTTCACTTTGTCACCTaGATTTTTAACCCCTGGAGA +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNVHFVT*IFNPWR
Trigger: TCTCCAGGGGTTAAAAATCAAGGTGACAAAGTGAAC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTGTTGACTTTGCTCTaGGATGTTCACTTTGTCACC +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLLTLL*DVHFVT
Trigger: GGTGACAAAGTGAACATCCAAGAGCAAAGTCAACAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGACTGGCTGTTGACTTaGCTCTTGGATGTTCACTTT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNDWLLT*LLDVHF
Trigger: AAAGTGAACATCCAAGAGCAAAGTCAACAGCCAGTC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAGCTGCTGGGTGTCCTaGATGTTAAACAATGAAAGA +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSCWVS*MLNNER
Trigger: TCTTTCATTGTTTAACATCAAGGACACCCAGCAGCT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTTCTTGCTATGTGCCTaGGACTTCATGTGTTTTGTC +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNFLLCA*DFMCFV
Trigger: GACAAAACACATGAAGTCCAAGGCACATAGCAAGAA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379388.7
ENST00000541134.5
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCGTCTTCATTTTCATaGTCATCCTCATCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSSSFS*SSSSGP
Trigger: TGGCCCAGATGAGGATGACAATGAAAATGAAGACGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGTCTACAGACGGAATaGTGTCGTTTTCATCTCTCG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNCLQTE*CRFHLS
Trigger: CGAGAGATGAAAACGACACAATTCCGTCTGTAGACA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGCTAGGCCTACAATATaGACGGTTTCCATGCTTAAC +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNARPTI*TVSMLN
Trigger: GTTAAGCATGGAAACCGTCAATATTGTAGGCCTAGC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGGGCCATATTTGTATaGGCTAGGCCTACAATATTG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGAIFV*ARPTIL
Trigger: CAATATTGTAGGCCTAGCCAATACAAATATGGCCCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCAGCTACGATCTTTTaGCGTTTCACACCTTTAAGG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSATIF*RFTPLR
Trigger: CCTTAAAGGTGTGAAACGCAAAAAGATCGTAGCTGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGAGATGCATTCGCTATaGTCAGTCCTGGTTTTACTT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNEMHSL*SVLVLL
Trigger: AAGTAAAACCAGGACTGACAATAGCGAATGCATCTC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCATTTGCTCTACGCTTaGATTAACAACAGAGGCAAC +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNHLLYA*INNRGN
Trigger: GTTGCCTCTGTTGTTAATCAAAGCGTAGAGCAAATG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCTTTCAGAAGAAGATaGCACATTTGCTCTACGCTT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSFRRR*HICSTL
Trigger: AAGCGTAGAGCAAATGTGCAATCTTCTTCTGAAAGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGTGCGTGGGATTTCTaGTGCTTATACAGATTACTT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNCAWDF*CLYRLL
Trigger: AAGTAATCTGTATAAGCACAAGAAATCCCACGCACA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCTACCAAAGCTTCATaGTCTGAGATAAGCTTCGAT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSTKAS*SEISFD
Trigger: ATCGAAGCTTATCTCAGACAATGAAGCTTTGGTAGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACACACTATCCAGTTGCTaGTCATCTACCAAAGCTTCA +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNTLSSC*SSTKAS
Trigger: TGAAGCTTTGGTAGATGACAAGCAACTGGATAGTGT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGAACATGACTTTCATTaGCTGAAGAGTCTTCTATGG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNEHDFH*LKSLLW
Trigger: CCATAGAAGACTCTTCAGCAAATGAAAGTCATGTTC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGGCTACCTTTGTTTTaGGTCCATGTAACTCAGAAC +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNWLPLF*VHVTQN
Trigger: GTTCTGAGTTACATGGACCAAAAACAAAGGTAGCCA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCTCTCATGGCTACCTTaGTTTTTGGTCCATGTAACT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLSWLP*FLVHVT
Trigger: AGTTACATGGACCAAAAACAAAGGTAGCCATGAGAG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGGCCTTCAGAACTTTTaGGAGATGTTCCACTTTCAT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNGLQNF*EMFHFH
Trigger: ATGAAAGTGGAACATCTCCAAAAAGTTCTGAAGGCC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCTCTGTTGGCAATTTaGACAAGGTTTCACTACGCT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSLLAI*TRFHYA
Trigger: AGCGTAGTGAAACCTTGTCAAAATTGCCAACAGAGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGTGGCAGTTTCTCTGTaGGCAATTTTGACAAGGTTT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNVAVSL*AILTRF
Trigger: AAACCTTGTCAAAATTGCCAACAGAGAAACTGCCAC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACCAAAGCTCGATTCTGTaGAGGAATGTTCTATCTCAG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNQSSIL*RNVLSQ
Trigger: CTGAGATAGAACATTCCTCAACAGAATCGAGCTTTG...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAAGAGGCTGAGAAACTaGAAGTGTGAGATAAACTGC +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNKRLRN*KCEINC
Trigger: GCAGTTTATCTCACACTTCAAGTTTCTCAGCCTCTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATGAGAGTGCAAAGTATTaGCAGAAAACTCAGCTAAAG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNESAKY*QKTQLK
Trigger: CTTTAGCTGAGTTTTCTGCAAATACTTTGCACTCTC...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAACCTGACAATGCAATaGGTATTTGGGAGCAAAGCA +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNNLTMQ*VFGSKA
Trigger: TGCTTTGCTCCCAAATACCAATTGCATTGTCAGGTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGTTGGCACAGAATTTaGTTCTTCACTGATTGGCAC +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNCWHRI*FFTDWH
Trigger: GTGCCAATCAGTGAAGAACAAAATTCTGTGCCAACA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCAATGTCTAAACTATTaGCTGGGGAAAGCATCCTTT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNQCLNY*LGKASF
Trigger: AAAGGATGCTTTCCCCAGCAAATAGTTTAGACATTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACGTTCACTTTGTCACCTaGATTTTTAACCCCTGGAGA +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNVHFVT*IFNPWR
Trigger: TCTCCAGGGGTTAAAAATCAAGGTGACAAAGTGAAC...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAGCTGCTGGGTGTCCTaGATGTTAAACAATGAAAGA +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSCWVS*MLNNER
Trigger: TCTTTCATTGTTTAACATCAAGGACACCCAGCAGCT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATACCAATAAGTCTGACTaGGAATGGGTAGTTATTGCT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNTNKSD*EWVVIA
Trigger: AGCAATAACTACCCATTCCAAGTCAGACTTATTGGT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGCTTTTCCACTTGCTaGAATAGACCAATAAGTCTG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNCFSTC*NRPISL
Trigger: CAGACTTATTGGTCTATTCAAGCAAGTGGAAAAGCA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTTACCTAATGCTCTCTaGCTTAAGCTGCTTTTCCAC +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNLPNAL*LKLLFH
Trigger: GTGGAAAAGCAGCTTAAGCAAGAGAGCATTAGGTAA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTCAGAGGCATCTTTATaGCTGAATTCAACTACTGTG +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNSEASL*LNSTTV
Trigger: CACAGTAGTTGAATTCAGCAATAAAGATGCCTCTGA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAAATCCACACATTTCTaGCTATGTGCCTTGGACTTC +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNKSTHF*LCALDF
Trigger: GAAGTCCAAGGCACATAGCAAGAAATGTGTGGATTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000379388.7
ENST00000541134.5
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACATAAAATCCATCAGGTaGCTATCACAAGCCTGTCCT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNIKSIR*LSQACP
Trigger: AGGACAGGCTTGTGATAGCAACCTGATGGATTTTAT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 90 bp TGCAAGACAAGACCCAGTTTGATAGTATGTGCGTGGGATTTCTTGTaGTTATACAGATTACTTTTAGTCTTAAATGAAAATCCACAAGTC +
Preference number: 5 (lower is better)
Translates to: CKTRPSLIVCAWDFL*LYRLLLVLNENPQV
Trigger: GACTTGTGGATTTTCATTTAAGACTAAAAGTAATCTGTATAAGCACAAGAAATCCCACGCACATACTATCAAACTGGGTCTTGTCTTGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATATTTCTGGGATGAATTaGTTTAGTTCGAGGCATCTT +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNISGMN*FSSRHL
Trigger: AAGATGCCTCGAACTAAACAAATTCATCCCAGAAAT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATTGTGCTTCTTCAATTTaGTCTCTTAGATTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNCASSI*SLRFLG
Trigger: TCCCAGAAATCTAAGAGACAAAATTGAAGAAGCACA...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATCAGATTCTTCAGATTTaGAGGCTTCAGCAATTATTC +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNQILQI*RLQQLF
Trigger: GAATAATTGCTGAAGCCTCAAAATCTGAAGAATCTG...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AGTGTAAAGTTACTGTCTTACACAAGGAGGACAGACCCATTTTCAAAGACTAATAAGCTGTTGATTATGTaGGTTGGATTTGGGAACAAA +
Preference number: 5 (lower is better)
Translates to: SVKLLSYTRRTDPFSKTNKLLIM*VGFGNK
Trigger: TTTGTTCCCAAATCCAACCAACATAATCAACAGCTT...ATTAGTCTTTGAAAATGGGTCTGTCCTCCTTGTGTAAGACAGTAACTTTACACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGTGCGTGGGATTTCTaGTGCTTATACAGATTACTT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNCAWDF*CLYRLL
Trigger: AAGTAATCTGTATAAGCACAAGAAATCCCACGCACA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCTACCAAAGCTTCATaGTCTGAGATAAGCTTCGAT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSTKAS*SEISFD
Trigger: ATCGAAGCTTATCTCAGACAATGAAGCTTTGGTAGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACACCAATAAGTCTGACTaGGAATGGGTAGTTATTGCT +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNTNKSD*EWVVIA
Trigger: AGCAATAACTACCCATTCCAAGTCAGACTTATTGGT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGCTTTTCCACTTGCTaGAATAGACCAATAAGTCTG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNCFSTC*NRPISL
Trigger: CAGACTTATTGGTCTATTCAAGCAAGTGGAAAAGCA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTCAGAGGCATCTTTATaGCTGAATTCAACTACTGTG +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNSEASL*LNSTTV
Trigger: CACAGTAGTTGAATTCAGCAATAAAGATGCCTCTGA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AACATTCATTCTATGTGCCTGTTACTCTGCCAGGTATATTATATAAAGTGTCCAATTTCTGGGATGAATTaGTTTAGTTCGAGGCATCTT +
Preference number: 5 (lower is better)
Translates to: NIHSMCLLLCQVYYIKCPISGMN*FSSRHL
Trigger: AAGATGCCTCGAACTAAACAAATTCATCCCAGAAAT...TGGACACTTTATATAATATACCTGGCAGAGTAACAGGCACATAGAATGAATGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484210.1
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACTGTGCTTCTTCAATTTaGTCTCTTAGATTTCTGGGA +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNCASSI*SLRFLG
Trigger: TCCCAGAAATCTAAGAGACAAAATTGAAGAAGCACA...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAAGCTGTTGATTATGTaGGTTGGATTTGGGAACAAA +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNKLLIM*VGFGNK
Trigger: TTTGTTCCCAAATCCAACCAACATAATCAACAGCTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp TTATACACAGAAACTCTGCCCCATAGCCATAAAATTTATATTCAACAGTGGAACAAGAAGATTGCACATTaGCTCTACGCTTTGATTAAC +
Preference number: 5 (lower is better)
Translates to: LYTETLPHSHKIYIQQWNKKIAH*LYALIN
Trigger: GTTAATCAAAGCGTAGAGCAAATGTGCAATCTTCTT...GTTCCACTGTTGAATATAAATTTTATGGCTATGGGGCAGAGTTTCTGTGTATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS-3UTR CAA 90 bp AACATTCATTCTATGTGCCTGTTACTCTGCCAGGTATATTATATAAAGTGTCCAAAAGTGGTAAGTAATTaGGCTAAGGACATAGCTAGT +
Preference number: 5 (lower is better)
Translates to: NIHSMCLLLCQVYYIKCPKVVSN*AKDIAS
Trigger: ACTAGCTATGTCCTTAGCCAAATTACTTACCACTTT...TGGACACTTTATATAATATACCTGGCAGAGTAACAGGCACATAGAATGAATGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000484210.1
CDS-3UTR CAA 90 bp AACATTCATTCTATGTGCCTGTTACTCTGCCAGGTATATTATATAAAGTGTCCAACCAAGCATTCCAATTaGAAAAAGGTAATCCTGGTT +
Preference number: 5 (lower is better)
Translates to: NIHSMCLLLCQVYYIKCPTKHSN*KKVILV
Trigger: AACCAGGATTACCTTTTTCAAATTGGAATGCTTGGT...TGGACACTTTATATAATATACCTGGCAGAGTAACAGGCACATAGAATGAATGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000484210.1
CDS GCA 72 bp ATGTGCACAGGCTGCAGCTCCATGGCGCCCAGGTCATaGTGTCTCTCATCAGTGGCGCCTTCCTCCTCGCTC +
Preference number: 6 (lower is better)
Translates to: MCTGCSSMAPRS*CLSSVAPSSSL
Trigger: GAGCGAGGAGGAAGGCGCCACTGATGAGAGACAGCATGACCTGGGCGCCATGGAGCTGCAGCCTGTGCACAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp GCCTTGCTCCTCACTGACATGGCTTCACCAGCAGCATaGCATCCTTGGTGGCTCTCATCCAGGGACTGTCCA +
Preference number: 6 (lower is better)
Translates to: ALLLTDMASPAA*HPWWLSSRDCP
Trigger: TGGACAGTCCCTGGATGAGAGCCACCAAGGATGCCATGCTGCTGGTGAAGCCATGTCAGTGAGGAGCAAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 72 bp TCAATTTTGTCAAGACCATGCGGAAGAGCCACCCCGTaGAGTCCAGTGACCCTTCTCCACGGAACCCAGGAC +
Preference number: 6 (lower is better)
Translates to: SILSRPCGRATP*SPVTLLHGTQD
Trigger: GTCCTGGGTTCCGTGGAGAAGGGTCACTGGACTGCACGGGGTGGCTCTTCCGCATGGTCTTGACAAAATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442081.6
CDS TCA 72 bp TATATGTGGGCCTTGTGCCAGTGCCTTGCTCCTCACTaGCATGGCTTCACCAGCAGCATGGCATCCTTGGTG +
Preference number: 6 (lower is better)
Translates to: YMWALCQCLAPH*HGFTSSMASLV
Trigger: CACCAAGGATGCCATGCTGCTGGTGAAGCCATGTCAGTGAGGAGCAAGGCACTGGCACAAGGCCCACATATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp ATGGGCAGCATGAATGATGATGGCACCTTCTGCACCTaGCTTCCAAGGGGCCTGAGCTCTGGTGGTAGCAGA +
Preference number: 6 (lower is better)
Translates to: MGSMNDDGTFCT*LPRGLSSGGSR
Trigger: TCTGCTACCACCAGAGCTCAGGCCCCTTGGAAGTCAGGTGCAGAAGGTGCCATCATCATTCATGCTGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 72 bp CCAGTCACTCCCACTCGAGAAGGTGAAGATGGAGGCTaGAATTCAGTAAGTGGTGTTGTCTGGGGTGGGGTG +
Preference number: 6 (lower is better)
Translates to: PVTPTREGEDGG*NSVSGVVWGGV
Trigger: CACCCCACCCCAGACAACACCACTTACTGAATTGCAGCCTCCATCTTCACCTTCTCGAGTGGGAGTGACTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 72 bp GGGACAAGCCTTAGCTTGTCCCCAGAAGTTTGGGGTTaGAGTGAGCTACAACTACACCACTGCACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: GTSLSLSPEVWG*SELQLHHCTPA
Trigger: GGCTGGAGTGCAGTGGTGTAGTTGTAGCTCACTGCAACCCCAAACTTCTGGGGACAAGCTAAGGCTTGTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484210.1
CDS CCA 72 bp ACATCCTCTTTATTATGTGCACAGGCTGCAGCTCCATaGCGCCCAGGTCATGCTGTCTCTCATCAGTGGCGC +
Preference number: 6 (lower is better)
Translates to: TSSLLCAQAAAP*RPGHAVSHQWR
Trigger: GCGCCACTGATGAGAGACAGCATGACCTGGGCGCCATGGAGCTGCAGCCTGTGCACATAATAAAGAGGATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp GCCTTCCTCCTCGCTCTCCCCACTGTCTTCTACGTCTaGATGAATACTAAGTGCTTTGGGGGACTCGTGGGA +
Preference number: 6 (lower is better)
Translates to: AFLLALPTVFYV*MNTKCFGGLVG
Trigger: TCCCACGAGTCCCCCAAAGCACTTAGTATTCATTCAGACGTAGAAGACAGTGGGGAGAGCGAGGAGGAAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 72 bp CAGAGGGTCCGTTACTCCTTCCAGAGTCTTGTTCTGTaGTGGGTAACCTTCTGGCAAAGGGAGTTGGTGGAC +
Preference number: 6 (lower is better)
Translates to: QRVRYSFQSLVL*WVTFWQRELVD
Trigger: GTCCACCAACTCCCTTTGCCAGAAGGTTACCCAGCACAGAACAAGACTCTGGAAGGAGTAACGGACCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 72 bp ACCAGTGGGCCTCTCCTTCTTTCTAAGAGAGGCACATaGCCAGTCACTCCCACTCGAGAAGGTGAAGATGGA +
Preference number: 6 (lower is better)
Translates to: TSGPLLLSKRGT*PVTPTREGEDG
Trigger: TCCATCTTCACCTTCTCGAGTGGGAGTGACTGGGCATGTGCCTCTCTTAGAAAGAAGGAGAGGCCCACTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp TGCTGCCTTTGTAGCTGGGCGTGTACCGTTCCTACGTaGGAGTCTTGCTTTCCTTCCAGTGGATTCATGTCG +
Preference number: 6 (lower is better)
Translates to: CCLCSWACTVPT*ESCFPSSGFMS
Trigger: CGACATGAATCCACTGGAAGGAAAGCAAGACTCTCACGTAGGAACGGTACACGCCCAGCTACAAAGGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 72 bp GCGCCTTCGGATCTCCATCTACGCAGTTCAGATGGTTaGTGCAGAAACAAGGGCTTCTTTGGGGAGACAGAT +
Preference number: 6 (lower is better)
Translates to: APSDLHLRSSDG*CRNKGFFGETD
Trigger: ATCTGTCTCCCCAAAGAAGCCCTTGTTTCTGCAGCAACCATCTGAACTGCGTAGATGGAGATCCGAAGGCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 72 bp TCCTCCTTTTTCTTATCTGGGGCGTCTGTTCCCAGATaGCGGAGGACCCAGCGACTCTGTAGTGTAGAATCT +
Preference number: 6 (lower is better)
Translates to: SSFFLSGASVPR*RRTQRLCSVES
Trigger: AGATTCTACACTACAGAGTCGCTGGGTCCTCCGGCATCTGGGAACAGACGCCCCAGATAAGAAAAAGGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 72 bp TTGTCAAATGAGTTGGGCCTGCTCAGGGAGTTGGTGTaGTGGATGACAGAGATTCCAGTTCCGTGTCTCTGC +
Preference number: 6 (lower is better)
Translates to: LSNELGLLRELV*WMTEIPVPCLC
Trigger: GCAGAGACACGGAACTGGAATCTCTGTCATCCAGCACACCAACTCCCTGAGCAGGCCCAACTCATTTGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp ATCAGCGCCTTCGGATCTCCATCTACGCAGTTCAGATaGTTGCTGCAGAAACAAGGGCTTCTTTGGGGAGAC +
Preference number: 6 (lower is better)
Translates to: ISAFGSPSTQFR*LLQKQGLLWGD
Trigger: GTCTCCCCAAAGAAGCCCTTGTTTCTGCAGCAACCATCTGAACTGCGTAGATGGAGATCCGAAGGCGCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp GGGGGACTCGTGGGACAAGAACAAGCCACCAGCATCTaGTTGCAAGACAAGACCCAGTTTGATAGTATGTGC +
Preference number: 6 (lower is better)
Translates to: GGLVGQEQATSI*LQDKTQFDSMC
Trigger: GCACATACTATCAAACTGGGTCTTGTCTTGCAACCAGATGCTGGTGGCTTGTTCTTGTCCCACGAGTCCCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp AGGGTCCGTTACTCCTTCCAGAGTCTTGTTCTGTGCTaGGTAACCTTCTGGCAAAGGGAGTTGGTGGACTCA +
Preference number: 6 (lower is better)
Translates to: RVRYSFQSLVLC*VTFWQRELVDS
Trigger: TGAGTCCACCAACTCCCTTTGCCAGAAGGTTACCCAGCACAGAACAAGACTCTGGAAGGAGTAACGGACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp AGGAAGGGGACAAGCCTTAGCTTGTCCCCAGAAGTTTaGGGTTGCAGTGAGCTACAACTACACCACTGCACT +
Preference number: 6 (lower is better)
Translates to: RKGTSLSLSPEV*GCSELQLHHCT
Trigger: AGTGCAGTGGTGTAGTTGTAGCTCACTGCAACCCCAAACTTCTGGGGACAAGCTAAGGCTTGTCCCCTTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000484210.1
CDS TCA 72 bp TCTTGTCCTGGGCTGCTGAACTTATCTGTTGTTCCATaGTGGTCGACAGCTTGGGATCCATGGTCTGCTCAG +
Preference number: 6 (lower is better)
Translates to: SCPGLLNLSVVP*WSTAWDPWSAQ
Trigger: CTGAGCAGACCATGGATCCCAAGCTGTCGACCATCATGGAACAACAGATAAGTTCAGCAGCCCAGGACAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 72 bp GAATTTTTATCTGGCTTGCTACCCTGCGTAGACACTTaGAGAGATAGCTGTGTGCTCTGGTGGCTAGGCGGT +
Preference number: 6 (lower is better)
Translates to: EFLSGLLPCVDT*RDSCVLWWLGG
Trigger: ACCGCCTAGCCACCAGAGCACACAGCTATCTCTGCAAGTGTCTACGCAGGGTAGCAAGCCAGATAAAAATTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp GGACTCGTGGGACAAGAACAAGCCACCAGCATCTGGTaGCAAGACAAGACCCAGTTTGATAGTATGTGCGTG +
Preference number: 6 (lower is better)
Translates to: GLVGQEQATSIW*QDKTQFDSMCV
Trigger: CACGCACATACTATCAAACTGGGTCTTGTCTTGCAACCAGATGCTGGTGGCTTGTTCTTGTCCCACGAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp AAAGAAACTGGGGAGGCTCTTTCAAAAGGCTCAGGCTaGTCAAATGAGTTGGGCCTGCTCAGGGAGTTGGTG +
Preference number: 6 (lower is better)
Translates to: KETGEALSKGSG*SNELGLLRELV
Trigger: CACCAACTCCCTGAGCAGGCCCAACTCATTTGACAAGCCTGAGCCTTTTGAAAGAGCCTCCCCAGTTTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp TGCTTTGGGGGACTCGTGGGACAAGAACAAGCCACCAGCATCTGGTaGCAAGACAAGACCCAGTTTGATAGTATGTGCGTGGGATTTCTT +
Preference number: 6 (lower is better)
Translates to: CFGGLVGQEQATSIW*QDKTQFDSMCVGFL
Trigger: AAGAAATCCCACGCACATACTATCAAACTGGGTCTTGTCTTGCAACCAGATGCTGGTGGCTTGTTCTTGTCCCACGAGTCCCCCAAAGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp AGGCCCCTGATATGGCACTGCATTCACACTGGGAAGAGCAGTATTTaGGAAAGATGTTGGGTGTACAGGAGACAGATGACTATCTGGGGC +
Preference number: 6 (lower is better)
Translates to: RPLIWHCIHTGKSSI*ERCWVYRRQMTIWG
Trigger: GCCCCAGATAGTCATCTGTCTCCTGTACACCCAACATCTTTCCAAAATACTGCTCTTCCCAGTGTGAATGCAGTGCCATATCAGGGGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp TTGGACTCTTTCTGGAGCTTTCCTGAAGTTCTCCTCTaGGAGCGTCTGATAGTGCAAGCTGGTGAGGATGAG +
Preference number: 6 (lower is better)
Translates to: LDSFWSFPEVLL*ERLIVQAGEDE
Trigger: CTCATCCTCACCAGCTTGCACTATCAGACGCTCTCAGAGGAGAACTTCAGGAAAGCTCCAGAAAGAGTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp GGACTGTCAGTTCTTAAGGGGGACACAGTGACATGGTaGACCACAACTTTCGGTAACTCTGTCACAGCTTGT +
Preference number: 6 (lower is better)
Translates to: GLSVLKGDTVTW*TTTFGNSVTAC
Trigger: ACAAGCTGTGACAGAGTTACCGAAAGTTGTGGTCCACCATGTCACTGTGTCCCCCTTAAGAACTGACAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp GAATTCTCATTAGTCTCCAACCTGGAGACTCCACCCTaGGACATGTTGGCTGAAAGTGGCTGTACGTTTGTC +
Preference number: 6 (lower is better)
Translates to: EFSLVSNLETPP*DMLAESGCTFV
Trigger: GACAAACGTACAGCCACTTTCAGCCAACATGTCCCAGGGTGGAGTCTCCAGGTTGGAGACTAATGAGAATTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp GGACTTCCCCGTTCTATTCAGCTCCTGGAAAGAAACTaGGGAGGCTCTTTCAAAAGGCTCAGGCTTGTCAAA +
Preference number: 6 (lower is better)
Translates to: GLPRSIQLLERN*GGSFKRLRLVK
Trigger: TTTGACAAGCCTGAGCCTTTTGAAAGAGCCTCCCCAGTTTCTTTCCAGGAGCTGAATAGAACGGGGAAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp CGATCTGGTTCTTCTGTGACCAAAATCTCTGGAACTTaGATGTTGTGCTGCCGGACAAGTCTTGAGGGCTGT +
Preference number: 6 (lower is better)
Translates to: RSGSSVTKISGT*MLCCRTSLEGC
Trigger: ACAGCCCTCAAGACTTGTCCGGCAGCACAACATCCAAGTTCCAGAGATTTTGGTCACAGAAGAACCAGATCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp GAACTTGAGTCACATTGTTCATCGAGGTCACTGAATTaGGCAGGATCAGCGCCTTCGGATCTCCATCTACGC +
Preference number: 6 (lower is better)
Translates to: ELESHCSSRSLN*AGSAPSDLHLR
Trigger: GCGTAGATGGAGATCCGAAGGCGCTGATCCTGCCAAATTCAGTGACCTCGATGAACAATGTGACTCAAGTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp TGGCTGTACGTTTGTCACCTGAAGGTCCTTCTGCTTTaGTGCACTAGAAAGTTCAGGCTTGGGATCCATGGC +
Preference number: 6 (lower is better)
Translates to: WLYVCHLKVLLL*CTRKFRLGIHG
Trigger: GCCATGGATCCCAAGCCTGAACTTTCTAGTGCACAAAAGCAGAAGGACCTTCAGGTGACAAACGTACAGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp GGTTCTTCTGTGACCAAAATCTCTGGAACTTGGATGTaGTGCTGCCGGACAAGTCTTGAGGGCTGTCCTAAC +
Preference number: 6 (lower is better)
Translates to: GSSVTKISGTWM*CCRTSLEGCPN
Trigger: GTTAGGACAGCCCTCAAGACTTGTCCGGCAGCACAACATCCAAGTTCCAGAGATTTTGGTCACAGAAGAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp GTCTGGGGTGGGGTGATGCTTCCACAATCGAATGATTaGCTTCTGAGATCAGAGACCTCCATTGACGTTTGC +
Preference number: 6 (lower is better)
Translates to: VWGGVMLPQSND*LLRSETSIDVC
Trigger: GCAAACGTCAATGGAGGTCTCTGATCTCAGAAGCAAATCATTCGATTGTGGAAGCATCACCCCACCCCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp CACAAGGTGAGCCCTTTTGTGACAAGGTGCTCAGTTCTGGCTCCATaGCTTTCAGTAAGACATCGAATGCAGTGTTTGTATAGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: HKVSPFVTRCSVLAP*LSVRHRMQCLYRRG
Trigger: CCCCCTCCTATACAAACACTGCATTCGATGTCTTACTGAAAGCAATGGAGCCAGAACTGAGCACCTTGTCACAAAAGGGCTCACCTTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp GGCTCTCATCCAGGGACTGTCCAGTACCAAGAACATGACTTTCATTaGCTGAAGAGTCTTCTATGGCTGCTTGTCTCACAAGTGTACGGG +
Preference number: 6 (lower is better)
Translates to: GSHPGTVQYQEHDFH*LKSLLWLLVSQVYG
Trigger: CCCGTACACTTGTGAGACAAGCAGCCATAGAAGACTCTTCAGCAAATGAAAGTCATGTTCTTGGTACTGGACAGTCCCTGGATGAGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp TCTCGATCTGGTTCTTCTGTGACCAAAATCTCTGGAACTTGGATGTaGTGCTGCCGGACAAGTCTTGAGGGCTGTCCTAACACATGTCGT +
Preference number: 6 (lower is better)
Translates to: SRSGSSVTKISGTWM*CCRTSLEGCPNTCR
Trigger: ACGACATGTGTTAGGACAGCCCTCAAGACTTGTCCGGCAGCACAACATCCAAGTTCCAGAGATTTTGGTCACAGAAGAACCAGATCGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp ACAAGGAACTTGAGTCACATTGTTCATCGAGGTCACTaGATTTGGCAGGATCAGCGCCTTCGGATCTCCATC +
Preference number: 6 (lower is better)
Translates to: TRNLSHIVHRGH*IWQDQRLRISI
Trigger: GATGGAGATCCGAAGGCGCTGATCCTGCCAAATTCAGTGACCTCGATGAACAATGTGACTCAAGTTCCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp TCCGTGTCTCTGCAGTTCTATCTTGTCCTGGGCTGCTaGACTTATCTGTTGTTCCATGATGGTCGACAGCTT +
Preference number: 6 (lower is better)
Translates to: SVSLQFYLVLGC*TYLLFHDGRQL
Trigger: AAGCTGTCGACCATCATGGAACAACAGATAAGTTCAGCAGCCCAGGACAAGATAGAACTGCAGAGACACGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp ACATGTCGTTCACTTGGACTCTTTCTGGAGCTTTCCTaGAGTTCTCCTCTGAGAGCGTCTGATAGTGCAAGC +
Preference number: 6 (lower is better)
Translates to: TCRSLGLFLELS*SSPLRASDSAS
Trigger: GCTTGCACTATCAGACGCTCTCAGAGGAGAACTTCAGGAAAGCTCCAGAAAGAGTCCAAGTGAACGACATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp CAAGGTTTCACTACGCTGGGGCCAACTGAACTTCTCTaGCTTTTCTTGATCATGGCATTGAGCTTCCAGGTC +
Preference number: 6 (lower is better)
Translates to: QGFTTLGPTELL*LFLIMALSFQV
Trigger: GACCTGGAAGCTCAATGCCATGATCAAGAAAAGTCAGAGAAGTTCAGTTGGCCCCAGCGTAGTGAAACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp CCACGGAACCCAGGACAACATGCTAAGCCTTTCTTCTaGACACCAAGTGCTGCTCTCATGCTCTTCCAAAAT +
Preference number: 6 (lower is better)
Translates to: PRNPGQHAKPFF*TPSAALMLFQN
Trigger: ATTTTGGAAGAGCATGAGAGCAGCACTTGGTGTTCAGAAGAAAGGCTTAGCATGTTGTCCTGGGTTCCGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442081.6
CDS GCA 72 bp AGTAAAGTTTCAGCATTTGACATCCTCTTTATTATGTaGACAGGCTGCAGCTCCATGGCGCCCAGGTCATGC +
Preference number: 6 (lower is better)
Translates to: SKVSAFDILFIM*TGCSSMAPRSC
Trigger: GCATGACCTGGGCGCCATGGAGCTGCAGCCTGTGCACATAATAAAGAGGATGTCAAATGCTGAAACTTTACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 72 bp CTGTACGTTTGTCACCTGAAGGTCCTTCTGCTTTTGTaGACTAGAAAGTTCAGGCTTGGGATCCATGGCCTT +
Preference number: 6 (lower is better)
Translates to: LYVCHLKVLLLL*TRKFRLGIHGL
Trigger: AAGGCCATGGATCCCAAGCCTGAACTTTCTAGTGCACAAAAGCAGAAGGACCTTCAGGTGACAAACGTACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 72 bp TCTTCTGTGACCAAAATCTCTGGAACTTGGATGTTGTaGTGCCGGACAAGTCTTGAGGGCTGTCCTAACACA +
Preference number: 6 (lower is better)
Translates to: SSVTKISGTWML*CRTSLEGCPNT
Trigger: TGTGTTAGGACAGCCCTCAAGACTTGTCCGGCAGCACAACATCCAAGTTCCAGAGATTTTGGTCACAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp TTTGGACTGTCAGTTCTTAAGGGGGACACAGTGACATaGTGGACCACAACTTTCGGTAACTCTGTCACAGCT +
Preference number: 6 (lower is better)
Translates to: FGLSVLKGDTVT*WTTTFGNSVTA
Trigger: AGCTGTGACAGAGTTACCGAAAGTTGTGGTCCACCATGTCACTGTGTCCCCCTTAAGAACTGACAGTCCAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp TGCTTTCCTTCCAGTGGATTCATGTCGCCTTTCTGGTaGGAATTCTCATTAGTCTCCAACCTGGAGACTCCA +
Preference number: 6 (lower is better)
Translates to: CFPSSGFMSPFW*EFSLVSNLETP
Trigger: TGGAGTCTCCAGGTTGGAGACTAATGAGAATTCCCACCAGAAAGGCGACATGAATCCACTGGAAGGAAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp GAAGATGGAGGCTGCAATTCAGTAAGTGGTGTTGTCTaGGGTGGGGTGATGCTTCCACAATCGAATGATTTG +
Preference number: 6 (lower is better)
Translates to: EDGGCNSVSGVV*GGVMLPQSNDL
Trigger: CAAATCATTCGATTGTGGAAGCATCACCCCACCCCAGACAACACCACTTACTGAATTGCAGCCTCCATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp CAAGTCTTGAGGGCTGTCCTAACACATGTCGTTCACTaGGACTCTTTCTGGAGCTTTCCTGAAGTTCTCCTC +
Preference number: 6 (lower is better)
Translates to: QVLRAVLTHVVH*DSFWSFPEVLL
Trigger: GAGGAGAACTTCAGGAAAGCTCCAGAAAGAGTCCAAGTGAACGACATGTGTTAGGACAGCCCTCAAGACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp GACTCCTGGAGAGAGTGGAATCAAAGCTCGATTCTGTaGAGGAATGTTCTATCTCAGCCAGACGGAGCCTTT +
Preference number: 6 (lower is better)
Translates to: DSWREWNQSSIL*RNVLSQPDGAF
Trigger: AAAGGCTCCGTCTGGCTGAGATAGAACATTCCTCAACAGAATCGAGCTTTGATTCCACTCTCTCCAGGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp CTTGACAAGGAACTTGAGTCACATTGTTCATCGAGGTCACTGAATTaGGCAGGATCAGCGCCTTCGGATCTCCATCTACGCAGTTCAGAT +
Preference number: 6 (lower is better)
Translates to: LDKELESHCSSRSLN*AGSAPSDLHLRSSD
Trigger: ATCTGAACTGCGTAGATGGAGATCCGAAGGCGCTGATCCTGCCAAATTCAGTGACCTCGATGAACAATGTGACTCAAGTTCCTTGTCAAG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp TTCCAGAGTCTTGTTCTGTGCTGGGTAACCTTCTGGCAAAGGGAGTaGGTGGACTCACTGTTTGATCGGCACTTTCAGAACGTGAAAAGT +
Preference number: 6 (lower is better)
Translates to: FQSLVLCWVTFWQRE*VDSLFDRHFQNVKS
Trigger: ACTTTTCACGTTCTGAAAGTGCCGATCAAACAGTGAGTCCACCAACTCCCTTTGCCAGAAGGTTACCCAGCACAGAACAAGACTCTGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp AGTGGTGTTGTCTGGGGTGGGGTGATGCTTCCACAATCGAATGATTaGCTTCTGAGATCAGAGACCTCCATTGACGTTTGCGTGCAATTA +
Preference number: 6 (lower is better)
Translates to: SGVVWGGVMLPQSND*LLRSETSIDVCVQL
Trigger: TAATTGCACGCAAACGTCAATGGAGGTCTCTGATCTCAGAAGCAAATCATTCGATTGTGGAAGCATCACCCCACCCCAGACAACACCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp CGTCTTGACAGTGAGGTTCTCCGCGGCTTCACACTATCCAGTTGCTaGTCATCTACCAAAGCTTCATTGTCTGAGATAAGCTTCGATATC +
Preference number: 6 (lower is better)
Translates to: RLDSEVLRGFTLSSC*SSTKASLSEISFDI
Trigger: GATATCGAAGCTTATCTCAGACAATGAAGCTTTGGTAGATGACAAGCAACTGGATAGTGTGAAGCCGCGGAGAACCTCACTGTCAAGACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp GACCGCCGGGCACAGGGCTGTGCTCAGGTTCTCTCATGGCTACCTTaGTTTTTGGTCCATGTAACTCAGAACAGTAAAATTTCTTATGAT +
Preference number: 6 (lower is better)
Translates to: DRRAQGCAQVLSWLP*FLVHVTQNSKISYD
Trigger: ATCATAAGAAATTTTACTGTTCTGAGTTACATGGACCAAAAACAAAGGTAGCCATGAGAGAACCTGAGCACAGCCCTGTGCCCGGCGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp CCCTACTTAGACTCCTGGAGAGAGTGGAATCAAAGCTCGATTCTGTaGAGGAATGTTCTATCTCAGCCAGACGGAGCCTTTTCTTTTTGG +
Preference number: 6 (lower is better)
Translates to: PYLDSWREWNQSSIL*RNVLSQPDGAFSFW
Trigger: CCAAAAAGAAAAGGCTCCGTCTGGCTGAGATAGAACATTCCTCAACAGAATCGAGCTTTGATTCCACTCTCTCCAGGAGTCTAAGTAGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp ACTCCTGGAGAGAGTGGAATCAAAGCTCGATTCTGTTaGGGAATGTTCTATCTCAGCCAGACGGAGCCTTTT +
Preference number: 6 (lower is better)
Translates to: TPGESGIKARFC*GMFYLSQTEPF
Trigger: AAAAGGCTCCGTCTGGCTGAGATAGAACATTCCTCAACAGAATCGAGCTTTGATTCCACTCTCTCCAGGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 72 bp GACAGTGAGGTTCTCCGCGGCTTCACACTATCCAGTTaGTTGTCATCTACCAAAGCTTCATTGTCTGAGATA +
Preference number: 6 (lower is better)
Translates to: DSEVLRGFTLSS*LSSTKASLSEI
Trigger: TATCTCAGACAATGAAGCTTTGGTAGATGACAAGCAACTGGATAGTGTGAAGCCGCGGAGAACCTCACTGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp TCTTGCTTTCCTTCCAGTGGATTCATGTCGCCTTTCTaGTGGGAATTCTCATTAGTCTCCAACCTGGAGACT +
Preference number: 6 (lower is better)
Translates to: SCFPSSGFMSPF*WEFSLVSNLET
Trigger: AGTCTCCAGGTTGGAGACTAATGAGAATTCCCACCAGAAAGGCGACATGAATCCACTGGAAGGAAAGCAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp TACCGTTCCTACGTGAGAGTCTTGCTTTCCTTCCAGTaGATTCATGTCGCCTTTCTGGTGGGAATTCTCATT +
Preference number: 6 (lower is better)
Translates to: YRSYVRVLLSFQ*IHVAFLVGILI
Trigger: AATGAGAATTCCCACCAGAAAGGCGACATGAATCCACTGGAAGGAAAGCAAGACTCTCACGTAGGAACGGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp AGCAAGTGCAACTTTTGTGGGCAAACCGAGTGGATTTaGATTACTGGCGCTTACTGTCCAATCAGTATAGGC +
Preference number: 6 (lower is better)
Translates to: SKCNFCGQTEWI*ITGAYCPISIG
Trigger: GCCTATACTGATTGGACAGTAAGCGCCAGTAATCCAAATCCACTCGGTTTGCCCACAAAAGTTGCACTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp GCAGTTCAGATGGTTGCTGCAGAAACAAGGGCTTCTTaGGGGAGACAGATTCTTCAGATTTTGAGGCTTCAG +
Preference number: 6 (lower is better)
Translates to: AVQMVAAETRAS*GRQILQILRLQ
Trigger: CTGAAGCCTCAAAATCTGAAGAATCTGTCTCCCCAAAGAAGCCCTTGTTTCTGCAGCAACCATCTGAACTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp AGGTCCTTCTGCTTTTGTGCACTAGAAAGTTCAGGCTaGGGATCCATGGCCTTTGGACTGTCAGTTCTTAAG +
Preference number: 6 (lower is better)
Translates to: RSFCFCALESSG*GSMAFGLSVLK
Trigger: CTTAAGAACTGACAGTCCAAAGGCCATGGATCCCAAGCCTGAACTTTCTAGTGCACAAAAGCAGAAGGACCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp AGTGAGGTTCTCCGCGGCTTCACACTATCCAGTTGCTaGTCATCTACCAAAGCTTCATTGTCTGAGATAAGC +
Preference number: 6 (lower is better)
Translates to: SEVLRGFTLSSC*SSTKASLSEIS
Trigger: GCTTATCTCAGACAATGAAGCTTTGGTAGATGACAAGCAACTGGATAGTGTGAAGCCGCGGAGAACCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp ATATGTATGATTTGGGGGAATCAATGCTTCCTCGTCTaGACAGTGAGGTTCTCCGCGGCTTCACACTATCCA +
Preference number: 6 (lower is better)
Translates to: ICMIWGNQCFLV*TVRFSAASHYP
Trigger: TGGATAGTGTGAAGCCGCGGAGAACCTCACTGTCAAGACGAGGAAGCATTGATTCCCCCAAATCATACATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp GTTTTCAGGCTAGGGAAAGCCAGCTGCTGGGTGTCCTaGATGTTAAACAATGAAAGAGAAGTGACTGGCTGT +
Preference number: 6 (lower is better)
Translates to: VFRLGKASCWVS*MLNNEREVTGC
Trigger: ACAGCCAGTCACTTCTCTTTCATTGTTTAACATCAAGGACACCCAGCAGCTGGCTTTCCCTAGCCTGAAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp GAGCAAGTGCAACTTTTGTGGGCAAACCGAGTGGATTaGGATTACTGGCGCTTACTGTCCAATCAGTATAGG +
Preference number: 6 (lower is better)
Translates to: EQVQLLWANRVD*DYWRLLSNQYR
Trigger: CCTATACTGATTGGACAGTAAGCGCCAGTAATCCAAATCCACTCGGTTTGCCCACAAAAGTTGCACTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp CGCGGCTTCACACTATCCAGTTGCTTGTCATCTACCAAAGCTTCATaGTCTGAGATAAGCTTCGATATCCGCTCCTCAAGTGTTTTTGTG +
Preference number: 6 (lower is better)
Translates to: RGFTLSSCLSSTKAS*SEISFDIRSSSVFV
Trigger: CACAAAAACACTTGAGGAGCGGATATCGAAGCTTATCTCAGACAATGAAGCTTTGGTAGATGACAAGCAACTGGATAGTGTGAAGCCGCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp CATGGTCTGCTCAGGGCCCCTGGCAACAAGGTGAATATGGGAGTTTaGCAACTGTATATTTTTATGCTGCTGGTCACTTCTTATGGTAAC +
Preference number: 6 (lower is better)
Translates to: HGLLRAPGNKVNMGV*QLYIFMLLVTSYGN
Trigger: GTTACCATAAGAAGTGACCAGCAGCATAAAAATATACAGTTGCAAAACTCCCATATTCACCTTGTTGCCAGGGGCCCTGAGCAGACCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp GACATGTTGGCTGAAAGTGGCTGTACGTTTGTCACCTaGAGGTCCTTCTGCTTTTGTGCACTAGAAAGTTCA +
Preference number: 6 (lower is better)
Translates to: DMLAESGCTFVT*RSFCFCALESS
Trigger: TGAACTTTCTAGTGCACAAAAGCAGAAGGACCTTCAGGTGACAAACGTACAGCCACTTTCAGCCAACATGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp TTAATCTGTTCTGATGCAGTACGCCTCATTTCCCGGTaGCATCCAGGAACATTCAGAGTATTCAAGCCAGCT +
Preference number: 6 (lower is better)
Translates to: LICSDAVRLISR*HPGTFRVFKPA
Trigger: AGCTGGCTTGAATACTCTGAATGTTCCTGGATGTCACCGGGAAATGAGGCGTACTGCATCAGAACAGATTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp TGGATTACTGGCGCTTACTGTCCAATCAGTATAGGCTaGAGTTTTCTGGTCCTTCTGAGGCAAATGCAACGA +
Preference number: 6 (lower is better)
Translates to: WITGAYCPISIG*SFLVLLRQMQR
Trigger: TCGTTGCATTTGCCTCAGAAGGACCAGAAAACTTCAGCCTATACTGATTGGACAGTAAGCGCCAGTAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 72 bp CCAGATAAAACAGAATTTTTATCTGGCTTGCTACCCTaGGTAGACACTTGCAGAGATAGCTGTGTGCTCTGG +
Preference number: 6 (lower is better)
Translates to: PDKTEFLSGLLP*VDTCRDSCVLW
Trigger: CCAGAGCACACAGCTATCTCTGCAAGTGTCTACGCAGGGTAGCAAGCCAGATAAAAATTCTGTTTTATCTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp AAGTGTGAGATAAACTGCTCTCCCTACTTAGACTCCTaGAGAGAGTGGAATCAAAGCTCGATTCTGTTGAGG +
Preference number: 6 (lower is better)
Translates to: KCEINCSPYLDS*REWNQSSILLR
Trigger: CCTCAACAGAATCGAGCTTTGATTCCACTCTCTCCAGGAGTCTAAGTAGGGAGAGCAGTTTATCTCACACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp AAGCCACCAGCATCTGGTTGCAAGACAAGACCCAGTTaGATAGTATGTGCGTGGGATTTCTTGTGCTTATAC +
Preference number: 6 (lower is better)
Translates to: KPPASGCKTRPS*IVCAWDFLCLY
Trigger: GTATAAGCACAAGAAATCCCACGCACATACTATCAAACTGGGTCTTGTCTTGCAACCAGATGCTGGTGGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp TCCATCTACGCAGTTCAGATGGTTGCTGCAGAAACAAGGGCTTCTTaGGGGAGACAGATTCTTCAGATTTTGAGGCTTCAGCAATTATTC +
Preference number: 6 (lower is better)
Translates to: SIYAVQMVAAETRAS*GRQILQILRLQQLF
Trigger: GAATAATTGCTGAAGCCTCAAAATCTGAAGAATCTGTCTCCCCAAAGAAGCCCTTGTTTCTGCAGCAACCATCTGAACTGCGTAGATGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp ATGGCACTGCATTCACACTGGGAAGAGCAGTATTTTGGAAAGATGTaGGGTGTACAGGAGACAGATGACTATCTGGGGCTATGTTTAAAG +
Preference number: 6 (lower is better)
Translates to: MALHSHWEEQYFGKM*GVQETDDYLGLCLK
Trigger: CTTTAAACATAGCCCCAGATAGTCATCTGTCTCCTGTACACCCAACATCTTTCCAAAATACTGCTCTTCCCAGTGTGAATGCAGTGCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp GGATTAGAAGAGCAAGATGGGCCTGAAGTGAAAACCTaGCAATGCAATTGGTATTTGGGAGCAAAGCAATCC +
Preference number: 6 (lower is better)
Translates to: GLEEQDGPEVKT*QCNWYLGAKQS
Trigger: GGATTGCTTTGCTCCCAAATACCAATTGCATTGTCAGGTTTTCACTTCAGGCCCATCTTGCTCTTCTAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp ACGGCACCCACCACGTTTCCTCTTAGATTTCTGGGATaGATTTGTTTAGTTCGAGGCATCTTCTTTGACTCA +
Preference number: 6 (lower is better)
Translates to: TAPTTFPLRFLG*ICLVRGIFFDS
Trigger: TGAGTCAAAGAAGATGCCTCGAACTAAACAAATTCATCCCAGAAATCTAAGAGGAAACGTGGTGGGTGCCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442081.6
CDS GCA 72 bp CTAAAGAGGCTGAGAAACTTGAAGTGTGAGATAAACTaGTCTCCCTACTTAGACTCCTGGAGAGAGTGGAAT +
Preference number: 6 (lower is better)
Translates to: LKRLRNLKCEIN*SPYLDSWREWN
Trigger: ATTCCACTCTCTCCAGGAGTCTAAGTAGGGAGAGCAGTTTATCTCACACTTCAAGTTTCTCAGCCTCTTTAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp TTCTTGATCATGGCATTGAGCTTCCAGGTCTCGATCTaGTTCTTCTGTGACCAAAATCTCTGGAACTTGGAT +
Preference number: 6 (lower is better)
Translates to: FLIMALSFQVSI*FFCDQNLWNLD
Trigger: ATCCAAGTTCCAGAGATTTTGGTCACAGAAGAACCAGATCGAGACCTGGAAGCTCAATGCCATGATCAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp GCACAAACAGCTCCATTTTCATCTTTGGCCCGCTTCTaGTGCTTTTCCATGGCAATGTCTAAACTATTTGCT +
Preference number: 6 (lower is better)
Translates to: AQTAPFSSLARF*CFSMAMSKLFA
Trigger: AGCAAATAGTTTAGACATTGCCATGGAAAAGCACCAGAAGCGGGCCAAAGATGAAAATGGAGCTGTTTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp TTGGTTGTAGTTTTCAGGCTAGGGAAAGCCAGCTGCTaGGTGTCCTTGATGTTAAACAATGAAAGAGAAGTG +
Preference number: 6 (lower is better)
Translates to: LVVVFRLGKASC*VSLMLNNEREV
Trigger: CACTTCTCTTTCATTGTTTAACATCAAGGACACCCAGCAGCTGGCTTTCCCTAGCCTGAAAACTACAACCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp CAACTTTTGTGGGCAAACCGAGTGGATTTGGATTACTaGCGCTTACTGTCCAATCAGTATAGGCTGAAGTTT +
Preference number: 6 (lower is better)
Translates to: QLLWANRVDLDY*RLLSNQYRLKF
Trigger: AAACTTCAGCCTATACTGATTGGACAGTAAGCGCCAGTAATCCAAATCCACTCGGTTTGCCCACAAAAGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp AGCCCTTTTGTGACAAGGTGCTCAGTTCTGGCTCCATaGCTTTCAGTAAGACATCGAATGCAGTGTTTGTAT +
Preference number: 6 (lower is better)
Translates to: SPFVTRCSVLAP*LSVRHRMQCLY
Trigger: ATACAAACACTGCATTCGATGTCTTACTGAAAGCAATGGAGCCAGAACTGAGCACCTTGTCACAAAAGGGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp GCACAGGGCTGTGCTCAGGTTCTCTCATGGCTACCTTaGTTTTTGGTCCATGTAACTCAGAACAGTAAAATT +
Preference number: 6 (lower is better)
Translates to: AQGCAQVLSWLP*FLVHVTQNSKI
Trigger: AATTTTACTGTTCTGAGTTACATGGACCAAAAACAAAGGTAGCCATGAGAGAACCTGAGCACAGCCCTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp GCTGCAGAAACAAGGGCTTCTTTGGGGAGACAGATTCTTCAGATTTaGAGGCTTCAGCAATTATTCCAGGTGTTTCTCCATTTTGTTTGG +
Preference number: 6 (lower is better)
Translates to: AAETRASLGRQILQI*RLQQLFQVFLHFVW
Trigger: CCAAACAAAATGGAGAAACACCTGGAATAATTGCTGAAGCCTCAAAATCTGAAGAATCTGTCTCCCCAAAGAAGCCCTTGTTTCTGCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000379388.7
ENST00000487103.5
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp GAACAAAGTGTTCATGTTGATGATACAAATGAGAAGCTGACTGCATaGCCCCTTGCTCATTCTTCTGAGCAGCAGACATATGGACTGTGT +
Preference number: 6 (lower is better)
Translates to: EQSVHVDDTNEKLTA*PLAHSSEQQTYGLC
Trigger: ACACAGTCCATATGTCTGCTGCTCAGAAGAATGAGCAAGGGGCAATGCAGTCAGCTTCTCATTTGTATCATCAACATGAACACTTTGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp GACAAGAACAAGCCACCAGCATCTGGTTGCAAGACAAGACCCAGTTaGATAGTATGTGCGTGGGATTTCTTGTGCTTATACAGATTACTT +
Preference number: 6 (lower is better)
Translates to: DKNKPPASGCKTRPS*IVCAWDFLCLYRLL
Trigger: AAGTAATCTGTATAAGCACAAGAAATCCCACGCACATACTATCAAACTGGGTCTTGTCTTGCAACCAGATGCTGGTGGCTTGTTCTTGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp TCTAAAGGTCTCACGTCTGTTGCACAAACAGCTCCATTTTCATCTTaGGCCCGCTTCTGGTGCTTTTCCATGGCAATGTCTAAACTATTT +
Preference number: 6 (lower is better)
Translates to: SKGLTSVAQTAPFSS*ARFWCFSMAMSKLF
Trigger: AAATAGTTTAGACATTGCCATGGAAAAGCACCAGAAGCGGGCCAAAGATGAAAATGGAGCTGTTTGTGCAACAGACGTGAGACCTTTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp ACAAGGGCTTCTTTGGGGAGACAGATTCTTCAGATTTaGAGGCTTCAGCAATTATTCCAGGTGTTTCTCCAT +
Preference number: 6 (lower is better)
Translates to: TRASLGRQILQI*RLQQLFQVFLH
Trigger: ATGGAGAAACACCTGGAATAATTGCTGAAGCCTCAAAATCTGAAGAATCTGTCTCCCCAAAGAAGCCCTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000379388.7
ENST00000487103.5
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp GTTCATGTTGATGATACAAATGAGAAGCTGACTGCATaGCCCCTTGCTCATTCTTCTGAGCAGCAGACATAT +
Preference number: 6 (lower is better)
Translates to: VHVDDTNEKLTA*PLAHSSEQQTY
Trigger: ATATGTCTGCTGCTCAGAAGAATGAGCAAGGGGCAATGCAGTCAGCTTCTCATTTGTATCATCAACATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp ACACTATCCAGTTGCTTGTCATCTACCAAAGCTTCATaGTCTGAGATAAGCTTCGATATCCGCTCCTCAAGT +
Preference number: 6 (lower is better)
Translates to: TLSSCLSSTKAS*SEISFDIRSSS
Trigger: ACTTGAGGAGCGGATATCGAAGCTTATCTCAGACAATGAAGCTTTGGTAGATGACAAGCAACTGGATAGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp CATTCTCTTGATTTTGCAGATTTGTCAGTGATCCTGTaGAACCTGAACACCCCGGAAGCTGTTGATTATGTT +
Preference number: 6 (lower is better)
Translates to: HSLDFADLSVIL*NLNTPEAVDYV
Trigger: AACATAATCAACAGCTTCCGGGGTGTTCAGGTTTCACAGGATCACTGACAAATCTGCAAAATCAAGAGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp ATCCAGTTGCTTGTCATCTACCAAAGCTTCATTGTCTaGGATAAGCTTCGATATCCGCTCCTCAAGTGTTTT +
Preference number: 6 (lower is better)
Translates to: IQLLVIYQSFIV*DKLRYPLLKCF
Trigger: AAAACACTTGAGGAGCGGATATCGAAGCTTATCTCAGACAATGAAGCTTTGGTAGATGACAAGCAACTGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS GCA 72 bp TACCTAATGCTCTCTTGCTTAAGCTGCTTTTCCACTTaGTTGAATAGACCAATAAGTCTGACTTGGAATGGG +
Preference number: 6 (lower is better)
Translates to: YLMLSCLSCFST*LNRPISLTWNG
Trigger: CCCATTCCAAGTCAGACTTATTGGTCTATTCAAGCAAGTGGAAAAGCAGCTTAAGCAAGAGAGCATTAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp CTGTTGACTTTGCTCTTGGATGTTCACTTTGTCACCTaGATTTTTAACCCCTGGAGACTTCCTTTCTTGGTT +
Preference number: 6 (lower is better)
Translates to: LLTLLLDVHFVT*IFNPWRLPFLV
Trigger: AACCAAGAAAGGAAGTCTCCAGGGGTTAAAAATCAAGGTGACAAAGTGAACATCCAAGAGCAAAGTCAACAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 90 bp GGAGCAGGTGAACTTCGAACTGTAAGAGTTAATGATGTGGATGACTaGATGTTTTCAAATTCCTGCAATTCACTTATAGGTTCTATAACG +
Preference number: 6 (lower is better)
Translates to: GAGELRTVRVNDVDD*MFSNSCNSLIGSIT
Trigger: CGTTATAGAACCTATAAGTGAATTGCAGGAATTTGAAAACATCAAGTCATCCACATCATTAACTCTTACAGTTCGAAGTTCACCTGCTCC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp GCATCTTTATTGCTGAATTCAACTACTGTGGACTTTTaGTTACCTAATGCTCTCTTGCTTAAGCTGCTTTTC +
Preference number: 6 (lower is better)
Translates to: ASLLLNSTTVDF*LPNALLLKLLF
Trigger: GAAAAGCAGCTTAAGCAAGAGAGCATTAGGTAATCAAAAGTCCACAGTAGTTGAATTCAGCAATAAAGATGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CCA 72 bp TTGGATGTTCACTTTGTCACCTTGATTTTTAACCCCTaGAGACTTCCTTTCTTGGTTATTGTCTGTACATTT +
Preference number: 6 (lower is better)
Translates to: LDVHFVTLIFNP*RLPFLVIVCTF
Trigger: AAATGTACAGACAATAACCAAGAAAGGAAGTCTCCAGGGGTTAAAAATCAAGGTGACAAAGTGAACATCCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS CAA 72 bp GTCACCTTGATTTTTAACCCCTGGAGACTTCCTTTCTaGGTTATTGTCTGTACATTTCAAAGGAGAAATATG +
Preference number: 6 (lower is better)
Translates to: VTLIFNPWRLPF*VIVCTFQRRNM
Trigger: CATATTTCTCCTTTGAAATGTACAGACAATAACCAAGAAAGGAAGTCTCCAGGGGTTAAAAATCAAGGTGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2
CDS TCA 72 bp CAGATTCTTCAAGATCATATCCAGATCGCTCATAACTaGATCTCTGTTTTTCATCTGATTCTTCTGTATCCT +
Preference number: 6 (lower is better)
Translates to: QILQDHIQIAHN*ISVFHLILLYP
Trigger: AGGATACAGAAGAATCAGATGAAAAACAGAGATTCAGTTATGAGCGATCTGGATATGATCTTGAAGAATCTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000442081.6
ENST00000541134.5
CDS CCA 72 bp ATGATGTCACTGCTATATTATAAACCTGTTCAAGTTTaGCATTCTCTTGATTTTGCAGATTTGTCAGTGATC +
Preference number: 6 (lower is better)
Translates to: MMSLLYYKPVQV*HSLDFADLSVI
Trigger: GATCACTGACAAATCTGCAAAATCAAGAGAATGCCAAACTTGAACAGGTTTATAATATAGCAGTGACATCAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000379388.7
ENST00000541134.5
ENST00000627968.2