RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HIPK3 (Homo sapiens)

Ensembl gene IDs: ENSG00000110422

Ensembl transcript IDs: ENST00000303296.9, ENST00000379016.7, ENST00000456517.2, ENST00000525975.5, ENST00000531504.5

Found 263 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GCTTTTTGTGACAAAGTACAGAAGGCTTGGTCACATTTAAATCACTaGGAACTAGAGAGAAATACTATCGCAAACCGTAATAGACATTAC +
Preference number: 1 (lower is better)
Translates to: AFCDKVQKAWSHLNH*ELERNTIANRNRHY
Trigger: GTAATGTCTATTACGGTTTGCGATAGTATTTCTCTCTAGTTCTCAGTGATTTAAATGTGACCAAGCCTTCTGTACTTTGTCACAAAAAGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
3UTR-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGCAAAACTGGACTTCTaGTCCCATAAGTCACCTGTC +
Preference number: 2 (lower is better)
Translates to: NLLEHINKIRRLWRAANLAKLDF*SHKSPV
Trigger: GACAGGTGACTTATGGGAGCAGAAGTCCAGTTTTGC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
3UTR-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAGTCTGTACACAGAATaGCTTCCCAAATGTAGACGT +
Preference number: 2 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSLYTE*LPKCRR
Trigger: ACGTCTACATTTGGGAAGCCATTCTGTGTACAGACT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
3UTR-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACCTTCATTTTCAGTGTaGCTAAAAATGTACTGCTGG +
Preference number: 2 (lower is better)
Translates to: NLLEHINKIRRLWRAANLPSFSV*LKMYCW
Trigger: CCAGCAGTACATTTTTAGTCACACTGAAAATGAAGG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
3UTR-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGAAGCTAGATCATTCTaGAAAATCAGACAGCAGAAT +
Preference number: 2 (lower is better)
Translates to: NLLEHINKIRRLWRAANLEARSF*KIRQQN
Trigger: ATTCTGCTGTCTGATTTTTCAGAATGATCTAGCTTC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
3UTR-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGGTCTGAATTTTAAGTaGTGCAGTCCTCAACATTTA +
Preference number: 2 (lower is better)
Translates to: NLLEHINKIRRLWRAANLGLNFK*CSPQHL
Trigger: TAAATGTTGAGGACTGCAGCACTTAAAATTCAGACC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
3UTR-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAAGTTAAGTCAAGCCTaGAAGATACAGCTTTCTCAA +
Preference number: 2 (lower is better)
Translates to: NLLEHINKIRRLWRAANLKLSQA*KIQLSQ
Trigger: TTGAGAAAGCTGTATCTTGCAGGCTTGACTTAACTT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
3UTR-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAGTCTAGGCAACATTTaGCCCATGCAAAAGACACAT +
Preference number: 3 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSLGNI*PMQKTH
Trigger: ATGTGTCTTTTGCATGGGCAAAATGTTGCCTAGACT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
3UTR-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAGCACTACTAACTGCTaGCTTTTCTTGAAGCTAGAT +
Preference number: 3 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSTTNC*LFLKLD
Trigger: ATCTAGCTTCAAGAAAAGCAAGCAGTTAGTAGTGCT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
3UTR-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACAAATGTTTGTATCATaGAGCTTCCCCAATATACTG +
Preference number: 3 (lower is better)
Translates to: NLLEHINKIRRLWRAANLQMFVS*SFPNIL
Trigger: CAGTATATTGGGGAAGCTCAATGATACAAACATTTG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
3UTR-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAACTGCTTGCTTTTCTaGAAGCTAGATCATTCTGAA +
Preference number: 3 (lower is better)
Translates to: NLLEHINKIRRLWRAANLNCLLF*KLDHSE
Trigger: TTCAGAATGATCTAGCTTCAAGAAAAGCAAGCAGTT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGCGGGGCCTGCGGCTTaGTCTCCTCAGGTCGCCGCG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLAGPAA*SPQVAA
Trigger: CGCGGCGACCTGAGGAGATCAAGCCGCAGGCCCCGC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAATTGGGGCCCATTCCTaGCGCCCCGGCCGGGAGCGG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLIGAHS*RPGRER
Trigger: CCGCTCCCGGCCGGGGCGTCAGGAATGGGCCCCAAT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAACGGGCGACGCAGGGTaGGGGGCCCACGGCGATTGG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLTGDAG*GAHGDW
Trigger: CCAATCGCCGTGGGCCCCGCACCCTGCGTCGCCCGT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGGGGCCCACGGCGATTaGGGCCCATTCCTGACGCCC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLGAHGD*GPFLTP
Trigger: GGGCGTCAGGAATGGGCCCCAATCGCCGTGGGCCCC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATCGGCCTCCGGCTACTaGGGCCTACGGGCGACGCAG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSASGY*GLRATQ
Trigger: CTGCGTCGCCCGTAGGCCCCAGTAGCCGGAGGCCGA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGCTGCTCCGCGACGCTaGGGACGGGGCCACAAAGCC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLAAPRR*GRGHKA
Trigger: GGCTTTGTGGCCCCGTCCCCAGCGTCGCGGAGCAGC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGGCGACGGCGGGGCCTaGGGCTTGATCTCCTCAGGT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLGDGGA*GLISSG
Trigger: ACCTGAGGAGATCAAGCCGCAGGCCCCGCCGTCGCC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACCCGACCGCTGCTGCTaGTGCTGCTGCTCTGGCTGC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLPDRCC*CCCSGC
Trigger: GCAGCCAGAGCAGCAGCAGCAGCAGCAGCGGTCGGG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303296.9
ENST00000379016.7
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATCCCCCGACCGCTGCTaGTGCTGCTGCTGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSPDRC*CCCCSG
Trigger: GCCAGAGCAGCAGCAGCAGCAGCAGCGGTCGGGGGA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303296.9
ENST00000379016.7
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACCTCTCCGCGGCCGCTaGCATCTTGTCCTGGCGGCT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLPLRGR*HLVLAA
Trigger: AGCCGCCAGGACAAGATGGCAGCGGCCGCGGAGAGG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303296.9
ENST00000379016.7
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGGCCATCGGCTGGGGTaGTCAAGCTGCGTGCCTGCG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLGHRLG*SSCVPA
Trigger: CGCAGGCACGCAGCTTGAGCACCCCAGCCGATGGCC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAACCCTGCAAACCCGCTaGTCCGCGACGCTGGGGACG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLTLQTR*SATLGT
Trigger: CGTCCCCAGCGTCGCGGAGCAGCGGGTTTGCAGGGT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACGCCAGTTCTCCCAGTaGGGCGAAGGGAAGCGGGCG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLRQFSQ*GEGKRA
Trigger: CGCCCGCTTCCCTTCGCCGCACTGGGAGAACTGGCG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACTGCTGCTGCTGCTCTaGCTGCTAAGCGCCGGGCCC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLLLLLL*LLSAGP
Trigger: GGGCCCGGCGCTTAGCAGCCAGAGCAGCAGCAGCAG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303296.9
ENST00000379016.7
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGACGCGGCCATCGGCTaGGGTGCTCAAGCTGCGTGC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLDAAIG*GAQAAC
Trigger: GCACGCAGCTTGAGCACCCCAGCCGATGGCCGCGTC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACTCAGGTCGCCGCGATaGCGGCAGTCGTCACTGAGG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLLRSPR*RQSSLR
Trigger: CCTCAGTGACGACTGCCGGCATCGCGGCGACCTGAG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATGCAGGGGGATGGGCTaGACTGCCCTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLCRGMG*TALRSW
Trigger: CCAGCTCCTCAGGGCAGTCCAGCCCATCCCCCTGCA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGCACGTCCCCAGAGTTaGCACCCTGCAAACCCGCTG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLARPQS*HPANPL
Trigger: CAGCGGGTTTGCAGGGTGTCAACTCTGGGGACGTGC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGGGGATGGGCTGGACTaGCCTGAGGAGCTGGTACTC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLGDGLD*PEELVL
Trigger: GAGTACCAGCTCCTCAGGGCAGTCCAGCCCATCCCC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACAGGTGGGCCACTGGTaGAGCACTACTGAGGGTGGC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLQVGHW*STTEGG
Trigger: GCCACCCTCAGTAGTGCTGCACCAGTGGCCCACCTG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATCCTTCCCGGGGATTTaGGGTGGGGACGGCTTGGCT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSFPGI*GGDGLA
Trigger: AGCCAAGCCGTCCCCACCCCAAATCCCCGGGAAGGA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000303296.9
ENST00000379016.7
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACGCCCCAATCTGAGGTaGCTGCACGTGAGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLRPNLR*LHVSLL
Trigger: CAGCAAGCTCACGTGCAGGCACCTCAGATTGGGGCG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACCAGAGTTGACACCCTaGAAACCCGCTGCTCCGCGA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLPELTP*KPAAPR
Trigger: TCGCGGAGCAGCGGGTTTGCAGGGTGTCAACTCTGG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGCTGCCATCTTGTCCTaGCGGCTGAGAGGAAACGGC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLAAILS*RLRGNG
Trigger: GCCGTTTCCTCTCAGCCGCCAGGACAAGATGGCAGC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303296.9
ENST00000379016.7
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATCTTGTCCTGGCGGCTaGGAGGAAACGGCGAAACAC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSCPGG*EETAKH
Trigger: GTGTTTCGCCGTTTCCTCTCAGCCGCCAGGACAAGA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303296.9
ENST00000379016.7
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACTGGTGCAGCACTACTaGGGGTGGCTGATGATGGGT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLLVQHY*GWLMMG
Trigger: ACCCATCATCAGCCACCCTCAGTAGTGCTGCACCAG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACCCACTGGGACTTGGTaGACTATGCCACTGGGATGG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLPTGTW*TMPLGW
Trigger: CCATCCCAGTGGCATAGTTCACCAAGTCCCAGTGGG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAGTGATGACACTCACTaGAGGACTCGGGGAGTCGGC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSDDTH*RTRGVG
Trigger: GCCGACTCCCCGAGTCCTGCAGTGAGTGTCATCACT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACTGGGGTGCTCAAGCTaGGTGCCTGCGCGTTTGTTT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLLGCSS*VPARLF
Trigger: AAACAAACGCGCAGGCACGCAGCTTGAGCACCCCAG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGGAGAGGCTAACAGGTaGGCCACTGGTGCAGCACTA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLGEANR*ATGAAL
Trigger: TAGTGCTGCACCAGTGGCCCACCTGTTAGCCTCTCC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATTGGTAGTGGCAGGCTaGGGCCAGACAACATGTGCA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLLVVAG*GQTTCA
Trigger: TGCACATGTTGTCTGGCCTCAGCCTGCCACTACCAA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACAGGTGGGCATGCACTaGTGTGTGATTGGGACTTCC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLQVGMH*CVIGTS
Trigger: GGAAGTCCCAATCACACAGCAGTGCATGCCCACCTG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACTCAAGCTGCGTGCCTaGGCGTTTGTTTGTTCCCCT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLLKLRA*AFVCSP
Trigger: AGGGGAACAAACAAACGCGCAGGCACGCAGCTTGAG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGGTGCTCAAGCTGCGTaGCTGCGCGTTTGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLGAQAA*LRVCLF
Trigger: GAACAAACAAACGCGCAGGCACGCAGCTTGAGCACC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGCAGTGGCCACTTGTTaGAGAATGGGCCGAATCACT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLAVATC*RMGRIT
Trigger: AGTGATTCGGCCCATTCTTCAACAAGTGGCCACTGC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATCACCACAACCAAACTaGGCAGTTCCTGCCTGCAGA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSPQPN*AVPACR
Trigger: TCTGCAGGCAGGAACTGCTCAGTTTGGTTGTGGTGA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATGCACAGCTGGGGCCTaGGTTACAAGTGGAACTGTA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLCTAGA*VTSGTV
Trigger: TACAGTTCCACTTGTAACTCAGGCCCCAGCTGTGCA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACACGTGAGCTTGCTGTaGCTGAGCTGCTATGACCTT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLHVSLL*LSCYDL
Trigger: AAGGTCATAGCAGCTCAGGCACAGCAAGCTCACGTG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGGGCCTTCTAGGAAATaGAATCTGTTTCGCCACGCC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLGPSRK*NLFRHA
Trigger: GGCGTGGCGAAACAGATTGCATTTCCTAGAAGGCCC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATACTATTCGGTCTCTTaGAGGGGGATGGGCTGGACT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLYYSVS*RGMGWT
Trigger: AGTCCAGCCCATCCCCCTGCAAGAGACCGAATAGTA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGTAGACCAAGACTTGTaGGGCCATACCTTCCTAGAG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLVDQDL*GHTFLE
Trigger: CTCTAGGAAGGTATGGCCTCACAAGTCTTGGTCTAC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303296.9
ENST00000379016.7
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATGGTGCACAACTGAATaGGCAGATGTGGTCAATGCC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLWCTTE*ADVVNA
Trigger: GGCATTGACCACATCTGCTCATTCAGTTGTGCACCA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACCCACACTAACTGGCTaGGGGGCAGATAAAGTTATC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLPTLTG*GADKVI
Trigger: GATAACTTTATCTGCCCCTCAGCCAGTTAGTGTGGG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATTGCTGTGCCTGAGCTaGTATGACCTTTGTAGCACC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLLLCLS*YDLCST
Trigger: GGTGCTACAAAGGTCATAGCAGCTCAGGCACAGCAA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACCAACTCCTCACTCTTaGGCTTCAATCCACATCGCT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLPTPHS*ASIHIA
Trigger: AGCGATGTGGATTGAAGCGCAAGAGTGAGGAGTTGG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAGGCCAGACAACATGTaGAATCCCCACACTAACTGG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLRPDNM*NPHTNW
Trigger: CCAGTTAGTGTGGGGATTGCACATGTTGTCTGGCCT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGCAAATGGACTGTCATaGCCGGAAGAGTCAGATGTC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLANGLS*PEESDV
Trigger: GACATCTGACTCTTCCGGGCATGACAGTCCATTTGC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATTCAATCCACATCGCTaGGGGCCTTCTAGGAAATGC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLFNPHR*GPSRKC
Trigger: GCATTTCCTAGAAGGCCCCCAGCGATGTGGATTGAA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACAGCATTTAACTACCTaGCCAAACGTGCCTCGACCA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLQHLTT*PNVPRP
Trigger: TGGTCGAGGCACGTTTGGCCAGGTAGTTAAATGCTG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAACTGCCCTGAGGAGCTaGTACTCAGAGTACTATCAG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLTALRS*YSEYYQ
Trigger: CTGATAGTACTCTGAGTACCAGCTCCTCAGGGCAGT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAGTGCTCTCTGCAAATaGACTGTCATGCCCGGAAGA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSALCK*TVMPGR
Trigger: TCTTCCGGGCATGACAGTCCATTTGCAGAGAGCACT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAGCACTTGTCTGCAATaGAAAGTTGTGTCCTCGAGG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSTCLQ*KVVSSR
Trigger: CCTCGAGGACACAACTTTTCATTGCAGACAAGTGCT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATGCATTGCGCTGCTATaGTTATCCAACTCCTCACTC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLCIALL*LSNSSL
Trigger: GAGTGAGGAGTTGGATAATCATAGCAGCGCAATGCA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAACAGTCTTTGATACATaGCTGGCCGACCCAAAGTCT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLTVFDT*LADPKS
Trigger: AGACTTTGGGTCGGCCAGTCATGTATCAAAGACTGT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATCCATGGTGCACAACTaGATGAGCAGATGTGGTCAA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSMVHN*MSRCGQ
Trigger: TTGACCACATCTGCTCATTCAGTTGTGCACCATGGA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGTTGCAGGAATACCTTaGATAGCTGGGGGACAGATA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLVAGIP*IAGGQI
Trigger: TATCTGTCCCCCAGCTATTCAAGGTATTCCTGCAAC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAGGCTGCGGCATCACTaGGTTATAATGATTGCTGCA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLRLRHH*VIMIAA
Trigger: TGCAGCAATCATTATAACTCAGTGATGCCGCAGCCT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATCTTGCCTCTCCTTCTaGGTTCTGATTGTCCTGTGT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSCLSF*VLIVLC
Trigger: ACACAGGACAATCAGAACTCAGAAGGAGAGGCAAGA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACTGCTGCTGGAATGCTaGTGTCAATTTTTGCTGACG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLLLLEC*CQFLLT
Trigger: CGTCAGCAAAAATTGACATCAGCATTCCAGCAGCAG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAGTGCTGAACCTGACTaGAGTTCAAATGCTGCTGCT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSAEPD*SSNAAA
Trigger: AGCAGCAGCATTTGAACTTCAGTCAGGTTCAGCACT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATTTCCATTCCACTCTTaGTGCCCAGATCCAAAGTGC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLFPFHS*CPDPKC
Trigger: GCACTTTGGATCTGGGCATCAAGAGTGGAATGGAAA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACTACCTGGCCAAACGTaGCTCGACCAAGAAAATCAA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLLPGQT*LDQENQ
Trigger: TTGATTTTCTTGGTCGAGGCACGTTTGGCCAGGTAG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAAACTGAGCAGTTCCTaGCTGCAGAGGTATTCCATG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLKLSSS*LQRYSM
Trigger: CATGGAATACCTCTGCAGGCAGGAACTGCTCAGTTT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACACAAAAGTGCTCTCTaGAAATGGACTGTCATGCCC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLHKSAL*KWTVMP
Trigger: GGGCATGACAGTCCATTTGCAGAGAGCACTTTTGTG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGCTTGCTGTCTTCTGTaGCCAAAGTTTCCATTCCAC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLACCLL*PKFPFH
Trigger: GTGGAATGGAAACTTTGGGCACAGAAGACAGCAAGC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGGACTTGGTGAACTATaGCACTGGGATGGGAGATAT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLGLGEL*HWDGRY
Trigger: ATATCTCCCATCCCAGTGGCATAGTTCACCAAGTCC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGCACTGCTGTGTGATTaGGACTTCCATGAGAAAGAG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLALLCD*DFHEKE
Trigger: CTCTTTCTCATGGAAGTCCCAATCACACAGCAGTGC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGGTACAATTCTGTTTTaGTCCTGTGGTAGCTGTCAC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLGTILF*SCGSCH
Trigger: GTGACAGCTACCACAGGATCAAAACAGAATTGTACC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAATCACACATCCCAATaGCCACATGTCTATGGCTTC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLNHTSQ*PHVYGF
Trigger: GAAGCCATAGACATGTGGTCATTGGGATGTGTGATT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGATGTCAATTTTTGCTaGCGAGTACCCACTGCAGAA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLDVNFC*RVPTAE
Trigger: TTCTGCAGTGGGTACTCGTCAGCAAAAATTGACATC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACTTCATTCCTGTCTCTaGCTCATGCTCTTCCAATGT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLLHSCL*LMLFQC
Trigger: ACATTGGAAGAGCATGAGGCAGAGACAGGAATGAAG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAATCACTGTGTTCACATaGGCTACATCATCCAGACTG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLITVFT*ATSSRL
Trigger: CAGTCTGGATGATGTAGCGCATGTGAACACAGTGAT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATGTCCTCCACAAAAGTaGTCTCTGCAAATGGACTGT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLCPPQK*SLQMDC
Trigger: ACAGTCCATTTGCAGAGAGCACTTTTGTGGAGGACA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACCCCAATATAATCTCTaGAGCTCTGTAGTACCGAGA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLPQYNL*SSVVPR
Trigger: TCTCGGTACTACAGAGCTCCAGAGATTATATTGGGG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACTGAGTGAATGTCTCTaGGAAGTCTCTTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLLSECL*EVSSSS
Trigger: TGATGAGGAAGAGACTTCCCAGAGACATTCACTCAG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAACTGAGTCTGATGAATaGTTGGGGATGGTAACAGAC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLTESDE*LGMVTD
Trigger: GTCTGTTACCATCCCCAACCATTCATCAGACTCAGT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACTGGCTGAGTTTTGTTaGACTCAGTGGAAATCCAGT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLLAEFC*TQWKSS
Trigger: ACTGGATTTCCACTGAGTCCAACAAAACTCAGCCAG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACCCTTAGTGGGAGGATaGGAATTTCCAAAGTTTCTA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLPLVGG*EFPKFL
Trigger: TAGAAACTTTGGAAATTCTCATCCTCCCACTAAGGG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACAGCATTTTCAGTACTaGGCCTTGCTAATATGCTCA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLQHFQY*ALLICS
Trigger: TGAGCATATTAGCAAGGCTCAGTACTGAAAATGCTG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGATGTGGTCAATGCCTaGCTTCTTAATGTTCCGATT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLDVVNA*LLNVPI
Trigger: AATCGGAACATTAAGAAGTCAGGCATTGACCACATC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAATAATGATTGCTGCATaGAATCATCTTCCCCCAGTC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLIMIAA*NHLPPV
Trigger: GACTGGGGGAAGATGATTTCATGCAGCAATCATTAT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATTTACATTCTCTGAGTaGATGTCTCTGGGAAGTCTC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLFTFSE*MSLGSL
Trigger: GAGACTTCCCAGAGACATTCACTCAGAGAATGTAAA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATACCTTTACATTCTCTaGGTGAATGTCTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLYLYIL*VNVSGK
Trigger: CTTCCCAGAGACATTCACTCAGAGAATGTAAAGGTA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATCCAGTATATGCAGGTaGTGCTGCAATGTAAGAATG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSSICR*CCNVRM
Trigger: CATTCTTACATTGCAGCATCACCTGCATATACTGGA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATATATGGATACTGGCTaGGTTTTGTTGGACTCAGTG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLYMDTG*VLLDSV
Trigger: CACTGAGTCCAACAAAACTCAGCCAGTATCCATATA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAAAACCCGCTTTTTGTaGCAAAGTACAGAAGGCTTG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLKTRFL*QSTEGL
Trigger: CAAGCCTTCTGTACTTTGTCACAAAAAGCGGGTTTT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGTAGACCAAGACTTGTaGGGCCATACCATTTTACAA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLVDQDL*GHTILQ
Trigger: TTGTAAAATGGTATGGCCTCACAAGTCTTGGTCTAC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACAATCTGCATTGCGCTaGTATGATTATCCAACTCCT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLQSALR*YDYPTP
Trigger: AGGAGTTGGATAATCATAGCAGCGCAATGCAGATTG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACTGGATTTCCCATGTTaGTTTGCAACATTGCAGGAA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLLDFPC*FATLQE
Trigger: TTCCTGCAATGTTGCAAACCAACATGGGAAATCCAG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACCACTTGTTGAAGAATaGGCCGAATCACTTTTAGTG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLPLVEE*AESLLV
Trigger: CACTAAAAGTGATTCGGCCCATTCTTCAACAAGTGG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACTGAATGAGCAGATGTaGTCAATGCCTGACTTCTTA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLLNEQM*SMPDFL
Trigger: TAAGAAGTCAGGCATTGACCACATCTGCTCATTCAG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGGCCTGAGTTACAAGTaGAACTGTATTATCTACCCT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLGLSYK*NCIIYP
Trigger: AGGGTAGATAATACAGTTCCACTTGTAACTCAGGCC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGGTGAACTATGCCACTaGGATGGGAGATATTATAAG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLGELCH*DGRYYK
Trigger: CTTATAATATCTCCCATCCCAGTGGCATAGTTCACC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAATGTGGTGGGAAGATTaGTTTGTACTGAGTCTGATG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLMWWED*FVLSLM
Trigger: CATCAGACTCAGTACAAACCAATCTTCCCACCACAT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAATGGTATCTTTGTCTaGAAAGCACTACCCTTAGTG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLNGIFV*KALPLV
Trigger: CACTAAGGGTAGTGCTTTTCAGACAAAGATACCATT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAATAATCAATGTCTGCTaGAAAGCATCACCACAACCA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLIINVC*KASPQP
Trigger: TGGTTGTGGTGATGCTTTTCAGCAGACATTGATTAT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATTCTTGCTCTTCATCTaGCATACTATTCGGTCTCTT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLFLLFI*HTIRSL
Trigger: AAGAGACCGAATAGTATGTCAGATGAAGAGCAAGAA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAATTCTGTGTTTTCATaGGTGTCCTCCACAAAAGTG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLNSVFS*VSSTKV
Trigger: CACTTTTGTGGAGGACACTCATGAAAACACAGAATT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAATCGACAATCTGCATTaGGCTGCTATGATTATCCAA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLIDNLH*AAMIIQ
Trigger: TTGGATAATCATAGCAGCGCAATGCAGATTGTCGAT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGTTGGTTTGCAACATTaGAGGAAGTATGGACAATTC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLVGLQH*RKYGQF
Trigger: GAATTGTCCATACTTCCTGCAATGTTGCAAACCAAC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATTTCCCATGTTGGTTTaGAACATTGCAGGAAGTATG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLFPMLV*NIAGSM
Trigger: CATACTTCCTGCAATGTTGCAAACCAACATGGGAAA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGCAATAATGATGGTTTaGCGCTGTTTGTCTGAAACT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLAIMMV*RCLSET
Trigger: AGTTTCAGACAAACAGCGGCAAACCATCATTATTGC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAATTCACATAGGTCCGTaGATAGTTTCTTTCCTGGAA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLIHIGP*IVSFLE
Trigger: TTCCAGGAAAGAAACTATCCACGGACCTATGTGAAT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAGTCACCTTCTCCAGTaGTACAATTCTGTTTTGATC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSHLLQ*YNSVLI
Trigger: GATCAAAACAGAATTGTACCACTGGAGAAGGTGACT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATCTTTGATACATGACTaGCCGACCCAAAGTCTATTA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSLIHD*PTQSLL
Trigger: TAATAGACTTTGGGTCGGCCAGTCATGTATCAAAGA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAATATTAACAAAAGGATaGTTCAGGGTCTCAGCTGGA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLILTKG*FRVSAG
Trigger: TCCAGCTGAGACCCTGAACCATCCTTTTGTTAATAT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACCCTTATTGAATAACTaGTGGGTTTACCATGTGTTG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLPLLNN*WVYHVL
Trigger: CAACACATGGTAAACCCACCAGTTATTCAATAAGGG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACACATATATGGATACTaGCTGAGTTTTGTTGGACTC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLHIYGY*LSFVGL
Trigger: GAGTCCAACAAAACTCAGCCAGTATCCATATATGTG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAATCTCCAACCAGAATaGGACATATCTGTTTCTTTG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLNLQPE*DISVSL
Trigger: CAAAGAAACAGATATGTCTCATTCTGGTTGGAGATT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACATCATCCAGACTGTTaGAAATGTATTTTCTGGCTT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLHHPDC*KCIFWL
Trigger: AAGCCAGAAAATACATTTTCAACAGTCTGGATGATG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATTTACATGGTTGCTATaGGGGAAATCTAGAAGATGT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLFTWLL*GKSRRC
Trigger: ACATCTTCTAGATTTCCCTCATAGCAACCATGTAAA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAATTATCTACCCTTATTaGATAACTGGTGGGTTTACC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLIIYPY*ITGGFT
Trigger: GGTAAACCCACCAGTTATTCAATAAGGGTAGATAAT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR TCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGTTTTGTACCTGTTGTaGTACAATCAATCCTTTGCA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLVLYLL*YNQSFA
Trigger: TGCAAAGGATTGATTGTATCACAACAGGTACAAAAC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAGGACTTTACATGGTTaGTATGAGGGAAATCTAGAA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLRTLHG*YEGNLE
Trigger: TTCTAGATTTCCCTCATAGCAACCATGTAAAGTCCT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAGTTATAATGATTGCTaGATGAAATCATCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSYNDC*MKSSSP
Trigger: GGGGGAAGATGATTTCATGCAGCAATCATTATAACT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGATCAATATTCAAAGTaGTCTGGCAAGCTTCACAAT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLDQYSK*SGKLHN
Trigger: ATTGTGAAGCTTGCCAGAGCACTTTGAATATTGATC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATATAGAATCTGTGTTTaGCATATGCTCATCGGCATT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLYRICV*HMLIGI
Trigger: AATGCCGATGAGCATATGGCAAACACAGATTCTATA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATGTAATATTGCACAGTaGAATTGCTACATGGCAAAC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLCNIAQ*NCYMAN
Trigger: GTTTGCCATGTAGCAATTGCACTGTGCAATATTACA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAGTTTGATAAACATATaGTGGGTAGACCAAGACTTG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSLINI*WVDQDL
Trigger: CAAGTCTTGGTCTACCCACCATATGTTTATCAAACT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGAATACACAACTGCTTaGCTCTACTTTGAGTTTCTT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLEYTTA*LYFEFL
Trigger: AAGAAACTCAAAGTAGAGCCAAGCAGTTGTGTATTC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAACATTGCAGGAAGTATaGACAATTCATCGACAATCT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLTLQEV*TIHRQS
Trigger: AGATTGTCGATGAATTGTCCATACTTCCTGCAATGT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATATGGCTTCACAAAATaGCAACCCCAATATAATCTC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLYGFTK*QPQYNL
Trigger: GAGATTATATTGGGGTTGCCATTTTGTGAAGCCATA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAATACCTTGAATAGCTaGGGGACAGATAATCAATGT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLNTLNS*GTDNQC
Trigger: ACATTGATTATCTGTCCCCCAGCTATTCAAGGTATT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATTATTGAATAACTGGTaGGTTTACCATGTGTTGCAG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLLLNNW*VYHVLQ
Trigger: CTGCAACACATGGTAAACCCACCAGTTATTCAATAA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAATGTAAGAATGTGGTaGGAAGATTGGTTTGTACTG +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLNVRMW*EDWFVL
Trigger: CAGTACAAACCAATCTTCCCACCACATTCTTACATT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATGCAATGTAAGAATGTaGTGGGAAGATTGGTTTGTA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLCNVRM*WEDWFV
Trigger: TACAAACCAATCTTCCCACCACATTCTTACATTGCA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACTGAGTTATAATGATTaGTGCATGAAATCATCTTCC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLLSYND*CMKSSS
Trigger: GGAAGATGATTTCATGCAGCAATCATTATAACTCAG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR GCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATCACAACTACTTTCTTaGTCTTCATCTGACATACTA +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSQLLS*SSSDIL
Trigger: TAGTATGTCAGATGAAGAGCAAGAAAGTAGTTGTGA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACGTAAGTATTTTTCATaGAGCATAAGACTTCATGCT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLRKYFS*SIRLHA
Trigger: AGCATGAAGTCTTATGCTCCATGAAAAATACTTACG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACAACATAATATTCTCTaGCTTGAGATCAGCATGAAT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLQHNIL*LEISMN
Trigger: ATTCATGCTGATCTCAAGCCAGAGAATATTATGTTG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAATGAGAAAGAGTGAATaGATTACTGGTAACACTAGT +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLMRKSE*ITGNTS
Trigger: ACTAGTGTTACCAGTAATCCATTCACTCTTTCTCAT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CCA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAGCAGTGTAGTTAACTaGGATATACCTTTATCAAAC +
Preference number: 4 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSSVVN*DIPLSN
Trigger: GTTTGATAAAGGTATATCCCAGTTAACTACACTGCT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS CCA 90 bp TGGCTAGGGCGAGGGGTAGTGGGAGGCCGGTCGGCCTCCGGCTACTaGGGCCTACGGGCGACGCAGGGTGCGGGGCCCACGGCGATTGGG +
Preference number: 5 (lower is better)
Translates to: WLGRGVVGGRSASGY*GLRATQGAGPTAIG
Trigger: CCCAATCGCCGTGGGCCCCGCACCCTGCGTCGCCCGTAGGCCCCAGTAGCCGGAGGCCGACCGGCCTCCCACTACCCCTCGCCCTAGCCA
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS CCA 90 bp CTGACGCCCCGGCCGGGAGCGGAGAAGGAAGACTGGCGGGAGTGGTaGCGACGGCGGGGCCTGCGGCTTGATCTCCTCAGGTCGCCGCGA +
Preference number: 5 (lower is better)
Translates to: LTPRPGAEKEDWREW*RRRGLRLDLLRSPR
Trigger: TCGCGGCGACCTGAGGAGATCAAGCCGCAGGCCCCGCCGTCGCCACCACTCCCGCCAGTCTTCCTTCTCCGCTCCCGGCCGGGGCGTCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS TCA 90 bp GGGCTCAGCCCCTCTCCGCGGCCGCTGCCATCTTGTCCTGGCGGCTaGGAGGAAACGGCGAAACACCCTCCCCCGACCGCTGCTGCTGCT +
Preference number: 5 (lower is better)
Translates to: GLSPSPRPLPSCPGG*EETAKHPPPTAAAA
Trigger: AGCAGCAGCAGCGGTCGGGGGAGGGTGTTTCGCCGTTTCCTCTCAGCCGCCAGGACAAGATGGCAGCGGCCGCGGAGAGGGGCTGAGCCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000303296.9
ENST00000379016.7
CDS GCA 90 bp GAGCGGAGAAGGAAGACTGGCGGGAGTGGTGGCGACGGCGGGGCCTaGGGCTTGATCTCCTCAGGTCGCCGCGATGCCGGCAGTCGTCAC +
Preference number: 5 (lower is better)
Translates to: ERRRKTGGSGGDGGA*GLISSGRRDAGSRH
Trigger: GTGACGACTGCCGGCATCGCGGCGACCTGAGGAGATCAAGCCGCAGGCCCCGCCGTCGCCACCACTCCCGCCAGTCTTCCTTCTCCGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS CCA 90 bp CGGCGAAACACCCTCCCCCGACCGCTGCTGCTGCTGCTGCTGCTCTaGCTGCTAAGCGCCGGGCCCGTCTCCCTCATCTTCCTTCCCGGG +
Preference number: 5 (lower is better)
Translates to: RRNTLPRPLLLLLLL*LLSAGPVSLIFLPG
Trigger: CCCGGGAAGGAAGATGAGGGAGACGGGCCCGGCGCTTAGCAGCCAGAGCAGCAGCAGCAGCAGCAGCGGTCGGGGGAGGGTGTTTCGCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303296.9
ENST00000379016.7
CDS TCA 90 bp GAAGGAAGACTGGCGGGAGTGGTGGCGACGGCGGGGCCTGCGGCTTaGTCTCCTCAGGTCGCCGCGATGCCGGCAGTCGTCACTGAGGCA +
Preference number: 5 (lower is better)
Translates to: EGRLAGVVATAGPAA*SPQVAAMPAVVTEA
Trigger: TGCCTCAGTGACGACTGCCGGCATCGCGGCGACCTGAGGAGATCAAGCCGCAGGCCCCGCCGTCGCCACCACTCCCGCCAGTCTTCCTTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS GCA 90 bp AGAAACAGACATTTTCATCCAAAGTCTTTCCGCCAGTTCTCCCAGTaGGGCGAAGGGAAGCGGGCGGCAGCCACCGTAACGAGAGAAGCC +
Preference number: 5 (lower is better)
Translates to: RNRHFHPKSFRQFSQ*GEGKRAAATVTREA
Trigger: GGCTTCTCTCGTTACGGTGGCTGCCGCCCGCTTCCCTTCGCCGCACTGGGAGAACTGGCGGAAAGACTTTGGATGAAAATGTCTGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456517.2
ENST00000531504.5
CDS CCA 90 bp GGATGCTGTAACATAGGTCTTGAGGTACACGGAGAGGCTAACAGGTaGGCCACTGGTGCAGCACTACTGAGGGTGGCTGATGATGGGTAT +
Preference number: 5 (lower is better)
Translates to: GCCNIGLEVHGEANR*ATGAALLRVADDGY
Trigger: ATACCCATCATCAGCCACCCTCAGTAGTGCTGCACCAGTGGCCCACCTGTTAGCCTCTCCGTGTACCTCAAGACCTATGTTACAGCATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CCA 90 bp GCTCTTCATCTGACATACTATTCGGTCTCTTGCAGGGGGATGGGCTaGACTGCCCTGAGGAGCTGGTACTCAGAGTACTATCAGGACTAC +
Preference number: 5 (lower is better)
Translates to: ALHLTYYSVSCRGMG*TALRSWYSEYYQDY
Trigger: GTAGTCCTGATAGTACTCTGAGTACCAGCTCCTCAGGGCAGTCCAGCCCATCCCCCTGCAAGAGACCGAATAGTATGTCAGATGAAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 90 bp AGGCTGTCCTCCGAGGTGTGTATTTCCAGCCAGGTGGGCATGCACTaGTGTGTGATTGGGACTTCCATGAGAAAGAGTGAATGGATTACT +
Preference number: 5 (lower is better)
Translates to: RLSSEVCISSQVGMH*CVIGTSMRKSEWIT
Trigger: AGTAATCCATTCACTCTTTCTCATGGAAGTCCCAATCACACAGCAGTGCATGCCCACCTGGCTGGAAATACACACCTCGGAGGACAGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CCA 90 bp TATTCGGTCTCTTGCAGGGGGATGGGCTGGACTGCCCTGAGGAGCTaGTACTCAGAGTACTATCAGGACTACTTAATGAACACATCCGAT +
Preference number: 5 (lower is better)
Translates to: YSVSCRGMGWTALRS*YSEYYQDYLMNTSD
Trigger: ATCGGATGTGTTCATTAAGTAGTCCTGATAGTACTCTGAGTACCAGCTCCTCAGGGCAGTCCAGCCCATCCCCCTGCAAGAGACCGAATA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGGCGGGGCCTGCGGCTaGATCTCCTCAGGTCGCCGC +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLGGACG*ISSGRR
Trigger: GCGGCGACCTGAGGAGATCAAGCCGCAGGCCCCGCC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACGGGGCCCACGGCGATaGGGGCCCATTCCTGACGCC +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLRGPRR*GPIPDA
Trigger: GGCGTCAGGAATGGGCCCCAATCGCCGTGGGCCCCG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS GCA 90 bp CGACAATCTGCATTGCGCTGCTATGATTATCCAACTCCTCACTCTTaGGCTTCAATCCACATCGCTGGGGGCCTTCTAGGAAATGCAATC +
Preference number: 5 (lower is better)
Translates to: RQSALRCYDYPTPHS*ASIHIAGGLLGNAI
Trigger: GATTGCATTTCCTAGAAGGCCCCCAGCGATGTGGATTGAAGCGCAAGAGTGAGGAGTTGGATAATCATAGCAGCGCAATGCAGATTGTCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CCA 90 bp TTCTGTGTTTTCATGAGTGTCCTCCACAAAAGTGCTCTCTGCAAATaGACTGTCATGCCCGGAAGAGTCAGATGTCGGAGAGCCATCCAC +
Preference number: 5 (lower is better)
Translates to: FCVFMSVLHKSALCK*TVMPGRVRCRRAIH
Trigger: GTGGATGGCTCTCCGACATCTGACTCTTCCGGGCATGACAGTCCATTTGCAGAGAGCACTTTTGTGGAGGACACTCATGAAAACACAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 90 bp TACCAATTCTGTGTTTTCATGAGTGTCCTCCACAAAAGTGCTCTCTaGAAATGGACTGTCATGCCCGGAAGAGTCAGATGTCGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: YQFCVFMSVLHKSAL*KWTVMPGRVRCRRA
Trigger: GGCTCTCCGACATCTGACTCTTCCGGGCATGACAGTCCATTTGCAGAGAGCACTTTTGTGGAGGACACTCATGAAAACACAGAATTGGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGCGGCCGCTGCCATCTaGTCCTGGCGGCTGAGAGGA +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLAAAAI*SWRLRG
Trigger: TCCTCTCAGCCGCCAGGACAAGATGGCAGCGGCCGC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303296.9
ENST00000379016.7
CDS TCA 90 bp GCAGGAAGTATGGACAATTCATCGACAATCTGCATTGCGCTGCTATaGTTATCCAACTCCTCACTCTTGCGCTTCAATCCACATCGCTGG +
Preference number: 5 (lower is better)
Translates to: AGSMDNSSTICIALL*LSNSSLLRFNPHRW
Trigger: CCAGCGATGTGGATTGAAGCGCAAGAGTGAGGAGTTGGATAATCATAGCAGCGCAATGCAGATTGTCGATGAATTGTCCATACTTCCTGC
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS TCA 90 bp CTGAAGTTCAAATGCTGCTGCTGGAATGCTGATGTCAATTTTTGCTaGCGAGTACCCACTGCAGAAGGCTGGTTTAATCTTCCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: LKFKCCCWNADVNFC*RVPTAEGWFNLPGA
Trigger: TGCCCCTGGAAGATTAAACCAGCCTTCTGCAGTGGGTACTCGTCAGCAAAAATTGACATCAGCATTCCAGCAGCAGCATTTGAACTTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 90 bp ATGACACTCACTGCAGGACTCGGGGAGTCGGCAATAATGATGGTTTaGCGCTGTTTGTCTGAAACTGATGAATCAGAGTCCTGTCTGATA +
Preference number: 5 (lower is better)
Translates to: MTLTAGLGESAIMMV*RCLSETDESESCLI
Trigger: TATCAGACAGGACTCTGATTCATCAGTTTCAGACAAACAGCGGCAAACCATCATTATTGCCGACTCCCCGAGTCCTGCAGTGAGTGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 90 bp CAGAGGATACCAATTCTGTGTTTTCATGAGTGTCCTCCACAAAAGTaGTCTCTGCAAATGGACTGTCATGCCCGGAAGAGTCAGATGTCG +
Preference number: 5 (lower is better)
Translates to: QRIPILCFHECPPQK*SLQMDCHARKSQMS
Trigger: CGACATCTGACTCTTCCGGGCATGACAGTCCATTTGCAGAGAGCACTTTTGTGGAGGACACTCATGAAAACACAGAATTGGTATCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS TCA 90 bp AAAGTGCTGAACCTGACTGAAGTTCAAATGCTGCTGCTGGAATGCTaGTGTCAATTTTTGCTGACGAGTACCCACTGCAGAAGGCTGGTT +
Preference number: 5 (lower is better)
Translates to: KVLNLTEVQMLLLEC*CQFLLTSTHCRRLV
Trigger: AACCAGCCTTCTGCAGTGGGTACTCGTCAGCAAAAATTGACATCAGCATTCCAGCAGCAGCATTTGAACTTCAGTCAGGTTCAGCACTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CCA 90 bp TTTCTAGTTCCACTGGTGGCACCACAACAGAACAGACAGCTGGCTTaGTTTCTGTGTCAGCAGAGGATACCAATTCTGTGTTTTCATGAG +
Preference number: 5 (lower is better)
Translates to: FLVPLVAPQQNRQLA*FLCQQRIPILCFHE
Trigger: CTCATGAAAACACAGAATTGGTATCCTCTGCTGACACAGAAACCAAGCCAGCTGTCTGTTCTGTTGTGGTGCCACCAGTGGAACTAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACAGGGGTGTCACCTGTaGCCAGGCAGGCACCAGCAT +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLQGCHL*PGRHQH
Trigger: ATGCTGGTGCCTGCCTGGCAACAGGTGACACCCCTG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACGCACGTCCCCAGAGTaGACACCCTGCAAACCCGCT +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLRTSPE*TPCKPA
Trigger: AGCGGGTTTGCAGGGTGTCAACTCTGGGGACGTGCG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456517.2
CDS GCA 90 bp AGCTGTCACAACTGTCACTGGATTTCCCATGTTGGTTTGCAACATTaGAGGAAGTATGGACAATTCATCGACAATCTGCATTGCGCTGCT +
Preference number: 5 (lower is better)
Translates to: SCHNCHWISHVGLQH*RKYGQFIDNLHCAA
Trigger: AGCAGCGCAATGCAGATTGTCGATGAATTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAATCCAGTGACAGTTGTGACAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS TCA 90 bp CTGGCTGAGTTTTGTTGGACTCAGTGGAAATCCAGTATATGCAGGTaGTGCTGCAATGTAAGAATGTGGTGGGAAGATTGGTTTGTACTG +
Preference number: 5 (lower is better)
Translates to: LAEFCWTQWKSSICR*CCNVRMWWEDWFVL
Trigger: CAGTACAAACCAATCTTCCCACCACATTCTTACATTGCAGCATCACCTGCATATACTGGATTTCCACTGAGTCCAACAAAACTCAGCCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 90 bp ACATTGCAGGAAGTATGGACAATTCATCGACAATCTGCATTGCGCTaGTATGATTATCCAACTCCTCACTCTTGCGCTTCAATCCACATC +
Preference number: 5 (lower is better)
Translates to: TLQEVWTIHRQSALR*YDYPTPHSCASIHI
Trigger: GATGTGGATTGAAGCGCAAGAGTGAGGAGTTGGATAATCATAGCAGCGCAATGCAGATTGTCGATGAATTGTCCATACTTCCTGCAATGT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 90 bp TTGCAACATTGCAGGAAGTATGGACAATTCATCGACAATCTGCATTaGGCTGCTATGATTATCCAACTCCTCACTCTTGCGCTTCAATCC +
Preference number: 5 (lower is better)
Translates to: LQHCRKYGQFIDNLH*AAMIIQLLTLALQS
Trigger: GGATTGAAGCGCAAGAGTGAGGAGTTGGATAATCATAGCAGCGCAATGCAGATTGTCGATGAATTGTCCATACTTCCTGCAATGTTGCAA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 90 bp CCTGTGGTAGCTGTCACAACTGTCACTGGATTTCCCATGTTGGTTTaGAACATTGCAGGAAGTATGGACAATTCATCGACAATCTGCATT +
Preference number: 5 (lower is better)
Translates to: PVVAVTTVTGFPMLV*NIAGSMDNSSTICI
Trigger: AATGCAGATTGTCGATGAATTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAATCCAGTGACAGTTGTGACAGCTACCACAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATGCCTGCACGTGAGCTaGCTGTGCCTGAGCTGCTAT +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLCLHVS*LCLSCY
Trigger: ATAGCAGCTCAGGCACAGCAAGCTCACGTGCAGGCA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS CCA 90 bp CTGTCACTGGATTTCCCATGTTGGTTTGCAACATTGCAGGAAGTATaGACAATTCATCGACAATCTGCATTGCGCTGCTATGATTATCCA +
Preference number: 5 (lower is better)
Translates to: LSLDFPCWFATLQEV*TIHRQSALRCYDYP
Trigger: TGGATAATCATAGCAGCGCAATGCAGATTGTCGATGAATTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAATCCAGTGACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CCA 90 bp GGCATGCACTGCTGTGTGATTGGGACTTCCATGAGAAAGAGTGAATaGATTACTGGTAACACTAGTAGGAATATAAGCTTGCTGTCTTCT +
Preference number: 5 (lower is better)
Translates to: GMHCCVIGTSMRKSE*ITGNTSRNISLLSS
Trigger: AGAAGACAGCAAGCTTATATTCCTACTAGTGTTACCAGTAATCCATTCACTCTTTCTCATGGAAGTCCCAATCACACAGCAGTGCATGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAATACTATTCGGTCTCTaGCAGGGGGATGGGCTGGAC +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLILFGL*QGDGLD
Trigger: GTCCAGCCCATCCCCCTGCAAGAGACCGAATAGTAT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS TCA 90 bp AGCTGGGGCCTGAGTTACAAGTGGAACTGTATTATCTACCCTTATTaGATAACTGGTGGGTTTACCATGTGTTGCAGGAATACCTTGAAT +
Preference number: 5 (lower is better)
Translates to: SWGLSYKWNCIIYPY*ITGGFTMCCRNTLN
Trigger: ATTCAAGGTATTCCTGCAACACATGGTAAACCCACCAGTTATTCAATAAGGGTAGATAATACAGTTCCACTTGTAACTCAGGCCCCAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATCCAACTCCTCACTCTaGCGCTTCAATCCACATCGC +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSNSSL*RFNPHR
Trigger: GCGATGTGGATTGAAGCGCAAGAGTGAGGAGTTGGA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATGCAGTGGCCACTTGTaGAAGAATGGGCCGAATCAC +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLCSGHL*KNGPNH
Trigger: GTGATTCGGCCCATTCTTCAACAAGTGGCCACTGCA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACAGTGCAGTGGCCACTaGTTGAAGAATGGGCCGAAT +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLQCSGH*LKNGPN
Trigger: ATTCGGCCCATTCTTCAACAAGTGGCCACTGCACTG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS CCA 90 bp ACGTGCCTCGACCAAGAAAATCAAGGACTTCGTAAGTATTTTTCATaGAGCATAAGACTTCATGCTGTACTAACTGATAGTCACCTTCTC +
Preference number: 5 (lower is better)
Translates to: TCLDQENQGLRKYFS*SIRLHAVLTDSHLL
Trigger: GAGAAGGTGACTATCAGTTAGTACAGCATGAAGTCTTATGCTCCATGAAAAATACTTACGAAGTCCTTGATTTTCTTGGTCGAGGCACGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATGCGTGCCTGCGCGTTaGTTTGTTCCCCTTAATGAA +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLCVPAR*FVPLNE
Trigger: TTCATTAAGGGGAACAAACAAACGCGCAGGCACGCA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000456517.2
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATGTTGCAGGAATACCTaGAATAGCTGGGGGACAGAT +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLCCRNT*NSWGTD
Trigger: ATCTGTCCCCCAGCTATTCAAGGTATTCCTGCAACA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS CCA 90 bp TCAGGACTACTTAATGAACACATCCGATCAATATTCAAAGTGCTCTaGCAAGCTTCACAATCTAGACTACCTTTACATTCTCTGAGTGAA +
Preference number: 5 (lower is better)
Translates to: SGLLNEHIRSIFKVL*QASQSRLPLHSLSE
Trigger: TTCACTCAGAGAATGTAAAGGTAGTCTAGATTGTGAAGCTTGCCAGAGCACTTTGAATATTGATCGGATGTGTTCATTAAGTAGTCCTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACATCGACAATCTGCATaGCGCTGCTATGATTATCCA +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLHRQSA*RCYDYP
Trigger: TGGATAATCATAGCAGCGCAATGCAGATTGTCGATG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAACTGGATTTCCCATGTaGGTTTGCAACATTGCAGGA +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLTGFPM*VCNIAG
Trigger: TCCTGCAATGTTGCAAACCAACATGGGAAATCCAGT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACACTTCTATTTGACCTaGACGGGCATAAGAAGGATG +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLHFYLT*TGIRRM
Trigger: CATCCTTCTTATGCCCGTCAAGGTCAAATAGAAGTG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATTGAACAAACAGTCTTaGATACATGACTGGCCGACC +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLLNKQS*IHDWPT
Trigger: GGTCGGCCAGTCATGTATCAAAGACTGTTTGTTCAA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATTCTCCTGGCAAACCTaGAGTCTGAGAAATGTATCG +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLFSWQT*SLRNVS
Trigger: CGATACATTTCTCAGACTCAAGGTTTGCCAGGAGAA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAATGGTTTGCCGCTGTTaGTCTGAAACTGATGAATCA +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLMVCRC*SETDES
Trigger: TGATTCATCAGTTTCAGACAAACAGCGGCAAACCAT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAGTAGGAATATAAGCTaGCTGTCTTCTGTGCCCAAA +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLSRNIS*LSSVPK
Trigger: TTTGGGCACAGAAGACAGCAAGCTTATATTCCTACT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAATGTGGTGGGAAGATaGGTTTGTACTGAGTCTGAT +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLNVVGR*VCTESD
Trigger: ATCAGACTCAGTACAAACCAATCTTCCCACCACATT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATATTGCACAGTGCAATaGCTACATGGCAAACTAGTG +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLYCTVQ*LHGKLV
Trigger: CACTAGTTTGCCATGTAGCAATTGCACTGTGCAATA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS TCA 90 bp GCAGTACTGCTTGAAGCAACTGGTCTTAAAAGTGAAGTTTTGTTGTaGTTATTTGTGTCACATGAATTTAGGTGGGACTTACAAATATCC +
Preference number: 5 (lower is better)
Translates to: AVLLEATGLKSEVLL*LFVSHEFRWDLQIS
Trigger: GGATATTTGTAAGTCCCACCTAAATTCATGTGACACAAATAATCACAACAAAACTTCACTTTTAAGACCAGTTGCTTCAAGCAGTACTGC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTATGTTGGTTTGCAACATaGCAGGAAGTATGGACAATT +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLCWFAT*QEVWTI
Trigger: AATTGTCCATACTTCCTGCAATGTTGCAAACCAACA...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACAAAGTACAGAAGGCTaGGTCACATTTAAATCACTG +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLQSTEG*VTFKSL
Trigger: CAGTGATTTAAATGTGACCAAGCCTTCTGTACTTTG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTACACTACAAAAGGCACTaGACTGAGTTTGATAAACAT +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLHYKRH*TEFDKH
Trigger: ATGTTTATCAAACTCAGTCAAGTGCCTTTTGTAGTG...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAAAAGTCATACAAGTTTaGTTCCAGCATCTCAAAGAC +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLKVIQV*FQHLKD
Trigger: GTCTTTGAGATGCTGGAACAAAACTTGTATGACTTT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAACATCATCCAGACTGTaGAAAATGTATTTTCTGGCT +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLTSSRL*KMYFLA
Trigger: AGCCAGAAAATACATTTTCAACAGTCTGGATGATGT...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGATACAATCAATCCTTaGCACTTGGTGTTTCTGAAA +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLDTINP*HLVFLK
Trigger: TTTCAGAAACACCAAGTGCAAAGGATTGATTGTATC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS-3UTR CAA 90 bp AATCTGCTGGAACATATAAATAAAATTAGAAGGCTGTGGAGGGCAGCAAATTTAGTCCTTATTGTAATATaGCACAGTGCAATTGCTACA +
Preference number: 5 (lower is better)
Translates to: NLLEHINKIRRLWRAANLVLIVI*HSAIAT
Trigger: TGTAGCAATTGCACTGTGCAATATTACAATAAGGAC...TAAATTTGCTGCCCTCCACAGCCTTCTAATTTTATTTATATGTTCCAGCAGATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
CDS TCA 72 bp GGCCCGCGCTCTCTCCTCTTCGGGCGGCCGCAGCCCTaGGCATGTCCGGGGTGGGGCGCAGGGCCGTGCCGG +
Preference number: 6 (lower is better)
Translates to: GPRSLLFGRPQP*ACPGWGAGPCR
Trigger: CCGGCACGGCCCTGCGCCCCACCCCGGACATGCTCAGGGCTGCGGCCGCCCGAAGAGGAGAGAGCGCGGGCC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000303296.9
ENST00000379016.7
CDS CCA 72 bp CCTACGGGCGACGCAGGGTGCGGGGCCCACGGCGATTaGGGCCCATTCCTGACGCCCCGGCCGGGAGCGGAG +
Preference number: 6 (lower is better)
Translates to: PTGDAGCGAHGD*GPFLTPRPGAE
Trigger: CTCCGCTCCCGGCCGGGGCGTCAGGAATGGGCCCCAATCGCCGTGGGCCCCGCACCCTGCGTCGCCCGTAGG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS CCA 72 bp CGAGGGGTAGTGGGAGGCCGGTCGGCCTCCGGCTACTaGGGCCTACGGGCGACGCAGGGTGCGGGGCCCACG +
Preference number: 6 (lower is better)
Translates to: RGVVGGRSASGY*GLRATQGAGPT
Trigger: CGTGGGCCCCGCACCCTGCGTCGCCCGTAGGCCCCAGTAGCCGGAGGCCGACCGGCCTCCCACTACCCCTCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS TCA 72 bp CTGGCGGGAGTGGTGGCGACGGCGGGGCCTGCGGCTTaGTCTCCTCAGGTCGCCGCGATGCCGGCAGTCGTC +
Preference number: 6 (lower is better)
Translates to: LAGVVATAGPAA*SPQVAAMPAVV
Trigger: GACGACTGCCGGCATCGCGGCGACCTGAGGAGATCAAGCCGCAGGCCCCGCCGTCGCCACCACTCCCGCCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS CCA 72 bp CCCCGGCCGGGAGCGGAGAAGGAAGACTGGCGGGAGTaGTGGCGACGGCGGGGCCTGCGGCTTGATCTCCTC +
Preference number: 6 (lower is better)
Translates to: PRPGAEKEDWRE*WRRRGLRLDLL
Trigger: GAGGAGATCAAGCCGCAGGCCCCGCCGTCGCCACCACTCCCGCCAGTCTTCCTTCTCCGCTCCCGGCCGGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS GCA 72 bp AGGAAGACTGGCGGGAGTGGTGGCGACGGCGGGGCCTaGGGCTTGATCTCCTCAGGTCGCCGCGATGCCGGC +
Preference number: 6 (lower is better)
Translates to: RKTGGSGGDGGA*GLISSGRRDAG
Trigger: GCCGGCATCGCGGCGACCTGAGGAGATCAAGCCGCAGGCCCCGCCGTCGCCACCACTCCCGCCAGTCTTCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS CAA 72 bp ACTGGCGGGAGTGGTGGCGACGGCGGGGCCTGCGGCTaGATCTCCTCAGGTCGCCGCGATGCCGGCAGTCGT +
Preference number: 6 (lower is better)
Translates to: TGGSGGDGGACG*ISSGRRDAGSR
Trigger: ACGACTGCCGGCATCGCGGCGACCTGAGGAGATCAAGCCGCAGGCCCCGCCGTCGCCACCACTCCCGCCAGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000303296.9
CDS TCA 72 bp CCCTCTCCGCGGCCGCTGCCATCTTGTCCTGGCGGCTaGGAGGAAACGGCGAAACACCCTCCCCCGACCGCT +
Preference number: 6 (lower is better)
Translates to: PSPRPLPSCPGG*EETAKHPPPTA
Trigger: AGCGGTCGGGGGAGGGTGTTTCGCCGTTTCCTCTCAGCCGCCAGGACAAGATGGCAGCGGCCGCGGAGAGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303296.9
ENST00000379016.7
CDS CCA 72 bp ACCCTCCCCCGACCGCTGCTGCTGCTGCTGCTGCTCTaGCTGCTAAGCGCCGGGCCCGTCTCCCTCATCTTC +
Preference number: 6 (lower is better)
Translates to: TLPRPLLLLLLL*LLSAGPVSLIF
Trigger: GAAGATGAGGGAGACGGGCCCGGCGCTTAGCAGCCAGAGCAGCAGCAGCAGCAGCAGCGGTCGGGGGAGGGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000303296.9
ENST00000379016.7
CDS CCA 72 bp GCTCAGCCCCTCTCCGCGGCCGCTGCCATCTTGTCCTaGCGGCTGAGAGGAAACGGCGAAACACCCTCCCCC +
Preference number: 6 (lower is better)
Translates to: AQPLSAAAAILS*RLRGNGETPSP
Trigger: GGGGGAGGGTGTTTCGCCGTTTCCTCTCAGCCGCCAGGACAAGATGGCAGCGGCCGCGGAGAGGGGCTGAGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000303296.9
ENST00000379016.7
CDS CCA 72 bp GGACGGGGCCACAAAGCCCGGGACGCGGCCATCGGCTaGGGTGCTCAAGCTGCGTGCCTGCGCGTTTGTTTG +
Preference number: 6 (lower is better)
Translates to: GRGHKARDAAIG*GAQAACLRVCL
Trigger: CAAACAAACGCGCAGGCACGCAGCTTGAGCACCCCAGCCGATGGCCGCGTCCCGGGCTTTGTGGCCCCGTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456517.2
ENST00000531504.5
CDS GCA 72 bp GGGCCACAAAGCCCGGGACGCGGCCATCGGCTGGGGTaGTCAAGCTGCGTGCCTGCGCGTTTGTTTGTTCCC +
Preference number: 6 (lower is better)
Translates to: GPQSPGRGHRLG*SSCVPARLFVP
Trigger: GGGAACAAACAAACGCGCAGGCACGCAGCTTGAGCACCCCAGCCGATGGCCGCGTCCCGGGCTTTGTGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456517.2
ENST00000531504.5
CDS CAA 72 bp CCCAACAATCACACACACGCACGCACGTCCCCAGAGTaGACACCCTGCAAACCCGCTGCTCCGCGACGCTGG +
Preference number: 6 (lower is better)
Translates to: PNNHTHARTSPE*TPCKPAAPRRW
Trigger: CCAGCGTCGCGGAGCAGCGGGTTTGCAGGGTGTCAACTCTGGGGACGTGCGTGCGTGTGTGTGATTGTTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456517.2
ENST00000531504.5
CDS GCA 72 bp AGCCCGGGACGCGGCCATCGGCTGGGGTGCTCAAGCTaGGTGCCTGCGCGTTTGTTTGTTCCCCTTAATGAA +
Preference number: 6 (lower is better)
Translates to: SPGRGHRLGCSS*VPARLFVPLNE
Trigger: TTCATTAAGGGGAACAAACAAACGCGCAGGCACGCAGCTTGAGCACCCCAGCCGATGGCCGCGTCCCGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000456517.2
ENST00000531504.5
CDS GCA 72 bp CATTTTCATCCAAAGTCTTTCCGCCAGTTCTCCCAGTaGGGCGAAGGGAAGCGGGCGGCAGCCACCGTAACG +
Preference number: 6 (lower is better)
Translates to: HFHPKSFRQFSQ*GEGKRAAATVT
Trigger: CGTTACGGTGGCTGCCGCCCGCTTCCCTTCGCCGCACTGGGAGAACTGGCGGAAAGACTTTGGATGAAAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000456517.2
ENST00000531504.5
CDS CAA 72 bp TCGCCACGCCCCAATCTGAGGTGCCTGCACGTGAGCTaGCTGTGCCTGAGCTGCTATGACCTTTGTAGCACC +
Preference number: 6 (lower is better)
Translates to: SPRPNLRCLHVS*LCLSCYDLCST
Trigger: GGTGCTACAAAGGTCATAGCAGCTCAGGCACAGCAAGCTCACGTGCAGGCACCTCAGATTGGGGCGTGGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 72 bp CGCCCCAATCTGAGGTGCCTGCACGTGAGCTTGCTGTaGCTGAGCTGCTATGACCTTTGTAGCACCTGCAGT +
Preference number: 6 (lower is better)
Translates to: RPNLRCLHVSLL*LSCYDLCSTCS
Trigger: ACTGCAGGTGCTACAAAGGTCATAGCAGCTCAGGCACAGCAAGCTCACGTGCAGGCACCTCAGATTGGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CAA 90 bp CAATCTGTTTCGCCACGCCCCAATCTGAGGTGCCTGCACGTGAGCTaGCTGTGCCTGAGCTGCTATGACCTTTGTAGCACCTGCAGTGTT +
Preference number: 6 (lower is better)
Translates to: QSVSPRPNLRCLHVS*LCLSCYDLCSTCSV
Trigger: AACACTGCAGGTGCTACAAAGGTCATAGCAGCTCAGGCACAGCAAGCTCACGTGCAGGCACCTCAGATTGGGGCGTGGCGAAACAGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 72 bp GAAATGCAATCTGTTTCGCCACGCCCCAATCTGAGGTaGCTGCACGTGAGCTTGCTGTGCCTGAGCTGCTAT +
Preference number: 6 (lower is better)
Translates to: EMQSVSPRPNLR*LHVSLLCLSCY
Trigger: ATAGCAGCTCAGGCACAGCAAGCTCACGTGCAGGCACCTCAGATTGGGGCGTGGCGAAACAGATTGCATTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CCA 72 bp AACATAGGTCTTGAGGTACACGGAGAGGCTAACAGGTaGGCCACTGGTGCAGCACTACTGAGGGTGGCTGAT +
Preference number: 6 (lower is better)
Translates to: NIGLEVHGEANR*ATGAALLRVAD
Trigger: ATCAGCCACCCTCAGTAGTGCTGCACCAGTGGCCCACCTGTTAGCCTCTCCGTGTACCTCAAGACCTATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 72 bp TCCTCCACAAAAGTGCTCTCTGCAAATGGACTGTCATaGCCGGAAGAGTCAGATGTCGGAGAGCCATCCACC +
Preference number: 6 (lower is better)
Translates to: SSTKVLSANGLS*PEESDVGEPST
Trigger: GGTGGATGGCTCTCCGACATCTGACTCTTCCGGGCATGACAGTCCATTTGCAGAGAGCACTTTTGTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CCA 72 bp CTGACATACTATTCGGTCTCTTGCAGGGGGATGGGCTaGACTGCCCTGAGGAGCTGGTACTCAGAGTACTAT +
Preference number: 6 (lower is better)
Translates to: LTYYSVSCRGMG*TALRSWYSEYY
Trigger: ATAGTACTCTGAGTACCAGCTCCTCAGGGCAGTCCAGCCCATCCCCCTGCAAGAGACCGAATAGTATGTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 72 bp GCATTGCGCTGCTATGATTATCCAACTCCTCACTCTTaGGCTTCAATCCACATCGCTGGGGGCCTTCTAGGA +
Preference number: 6 (lower is better)
Translates to: ALRCYDYPTPHS*ASIHIAGGLLG
Trigger: TCCTAGAAGGCCCCCAGCGATGTGGATTGAAGCGCAAGAGTGAGGAGTTGGATAATCATAGCAGCGCAATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CCA 72 bp TCTTGCAGGGGGATGGGCTGGACTGCCCTGAGGAGCTaGTACTCAGAGTACTATCAGGACTACTTAATGAAC +
Preference number: 6 (lower is better)
Translates to: SCRGMGWTALRS*YSEYYQDYLMN
Trigger: GTTCATTAAGTAGTCCTGATAGTACTCTGAGTACCAGCTCCTCAGGGCAGTCCAGCCCATCCCCCTGCAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 72 bp TCCGAGGTGTGTATTTCCAGCCAGGTGGGCATGCACTaGTGTGTGATTGGGACTTCCATGAGAAAGAGTGAA +
Preference number: 6 (lower is better)
Translates to: SEVCISSQVGMH*CVIGTSMRKSE
Trigger: TTCACTCTTTCTCATGGAAGTCCCAATCACACAGCAGTGCATGCCCACCTGGCTGGAAATACACACCTCGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 72 bp ACTGCAGGACTCGGGGAGTCGGCAATAATGATGGTTTaGCGCTGTTTGTCTGAAACTGATGAATCAGAGTCC +
Preference number: 6 (lower is better)
Translates to: TAGLGESAIMMV*RCLSETDESES
Trigger: GGACTCTGATTCATCAGTTTCAGACAAACAGCGGCAAACCATCATTATTGCCGACTCCCCGAGTCCTGCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CCA 72 bp TTCATGAGTGTCCTCCACAAAAGTGCTCTCTGCAAATaGACTGTCATGCCCGGAAGAGTCAGATGTCGGAGA +
Preference number: 6 (lower is better)
Translates to: FMSVLHKSALCK*TVMPGRVRCRR
Trigger: TCTCCGACATCTGACTCTTCCGGGCATGACAGTCCATTTGCAGAGAGCACTTTTGTGGAGGACACTCATGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 72 bp GACGGGGATTTAAGCCCACTGGGACTTGGTGAACTATaGCACTGGGATGGGAGATATTATAAGTTGGATGCT +
Preference number: 6 (lower is better)
Translates to: DGDLSPLGLGEL*HWDGRYYKLDA
Trigger: AGCATCCAACTTATAATATCTCCCATCCCAGTGGCATAGTTCACCAAGTCCCAGTGGGCTTAAATCCCCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CAA 90 bp ACTGCAGGACTCGGGGAGTCGGCAATAATGATGGTTTGCCGCTGTTaGTCTGAAACTGATGAATCAGAGTCCTGTCTGATAGATGTTTCA +
Preference number: 6 (lower is better)
Translates to: TAGLGESAIMMVCRC*SETDESESCLIDVS
Trigger: TGAAACATCTATCAGACAGGACTCTGATTCATCAGTTTCAGACAAACAGCGGCAAACCATCATTATTGCCGACTCCCCGAGTCCTGCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 72 bp GTCGGAGAGCCATCCACCGTATCACAACTACTTTCTTaGTCTTCATCTGACATACTATTCGGTCTCTTGCAG +
Preference number: 6 (lower is better)
Translates to: VGEPSTVSQLLS*SSSDILFGLLQ
Trigger: CTGCAAGAGACCGAATAGTATGTCAGATGAAGAGCAAGAAAGTAGTTGTGATACGGTGGATGGCTCTCCGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 72 bp TGTGTTTTCATGAGTGTCCTCCACAAAAGTGCTCTCTaGAAATGGACTGTCATGCCCGGAAGAGTCAGATGT +
Preference number: 6 (lower is better)
Translates to: CVFMSVLHKSAL*KWTVMPGRVRC
Trigger: ACATCTGACTCTTCCGGGCATGACAGTCCATTTGCAGAGAGCACTTTTGTGGAGGACACTCATGAAAACACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 72 bp CCAATTCTGTGTTTTCATGAGTGTCCTCCACAAAAGTaGTCTCTGCAAATGGACTGTCATGCCCGGAAGAGT +
Preference number: 6 (lower is better)
Translates to: PILCFHECPPQK*SLQMDCHARKS
Trigger: ACTCTTCCGGGCATGACAGTCCATTTGCAGAGAGCACTTTTGTGGAGGACACTCATGAAAACACAGAATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CAA 72 bp CTCGGGGAGTCGGCAATAATGATGGTTTGCCGCTGTTaGTCTGAAACTGATGAATCAGAGTCCTGTCTGATA +
Preference number: 6 (lower is better)
Translates to: LGESAIMMVCRC*SETDESESCLI
Trigger: TATCAGACAGGACTCTGATTCATCAGTTTCAGACAAACAGCGGCAAACCATCATTATTGCCGACTCCCCGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS TCA 72 bp AACCTGACTGAAGTTCAAATGCTGCTGCTGGAATGCTaGTGTCAATTTTTGCTGACGAGTACCCACTGCAGA +
Preference number: 6 (lower is better)
Translates to: NLTEVQMLLLEC*CQFLLTSTHCR
Trigger: TCTGCAGTGGGTACTCGTCAGCAAAAATTGACATCAGCATTCCAGCAGCAGCATTTGAACTTCAGTCAGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 72 bp TGCAGGAAGTATGGACAATTCATCGACAATCTGCATTaGGCTGCTATGATTATCCAACTCCTCACTCTTGCG +
Preference number: 6 (lower is better)
Translates to: CRKYGQFIDNLH*AAMIIQLLTLA
Trigger: CGCAAGAGTGAGGAGTTGGATAATCATAGCAGCGCAATGCAGATTGTCGATGAATTGTCCATACTTCCTGCA
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CAA 90 bp TCCTGTGGTAGCTGTCACAACTGTCACTGGATTTCCCATGTTGGTTaGCAACATTGCAGGAAGTATGGACAATTCATCGACAATCTGCAT +
Preference number: 6 (lower is better)
Translates to: SCGSCHNCHWISHVG*QHCRKYGQFIDNLH
Trigger: ATGCAGATTGTCGATGAATTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAATCCAGTGACAGTTGTGACAGCTACCACAGGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS TCA 72 bp ATGGACAATTCATCGACAATCTGCATTGCGCTGCTATaGTTATCCAACTCCTCACTCTTGCGCTTCAATCCA +
Preference number: 6 (lower is better)
Translates to: MDNSSTICIALL*LSNSSLLRFNP
Trigger: TGGATTGAAGCGCAAGAGTGAGGAGTTGGATAATCATAGCAGCGCAATGCAGATTGTCGATGAATTGTCCAT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS TCA 72 bp CTGATAGTCACCTTCTCCAGTGGTACAATTCTGTTTTaGTCCTGTGGTAGCTGTCACAACTGTCACTGGATT +
Preference number: 6 (lower is better)
Translates to: LIVTFSSGTILF*SCGSCHNCHWI
Trigger: AATCCAGTGACAGTTGTGACAGCTACCACAGGATCAAAACAGAATTGTACCACTGGAGAAGGTGACTATCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS TCA 72 bp AAATGCTGCTGCTGGAATGCTGATGTCAATTTTTGCTaGCGAGTACCCACTGCAGAAGGCTGGTTTAATCTT +
Preference number: 6 (lower is better)
Translates to: KCCCWNADVNFC*RVPTAEGWFNL
Trigger: AAGATTAAACCAGCCTTCTGCAGTGGGTACTCGTCAGCAAAAATTGACATCAGCATTCCAGCAGCAGCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 72 bp GAAGTATGGACAATTCATCGACAATCTGCATTGCGCTaGTATGATTATCCAACTCCTCACTCTTGCGCTTCA +
Preference number: 6 (lower is better)
Translates to: EVWTIHRQSALR*YDYPTPHSCAS
Trigger: TGAAGCGCAAGAGTGAGGAGTTGGATAATCATAGCAGCGCAATGCAGATTGTCGATGAATTGTCCATACTTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 72 bp GCTGTCACAACTGTCACTGGATTTCCCATGTTGGTTTaGAACATTGCAGGAAGTATGGACAATTCATCGACA +
Preference number: 6 (lower is better)
Translates to: AVTTVTGFPMLV*NIAGSMDNSST
Trigger: TGTCGATGAATTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAATCCAGTGACAGTTGTGACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CCA 72 bp GATTTAAGCCCACTGGGACTTGGTGAACTATGCCACTaGGATGGGAGATATTATAAGTTGGATGCTGTAACA +
Preference number: 6 (lower is better)
Translates to: DLSPLGLGELCH*DGRYYKLDAVT
Trigger: TGTTACAGCATCCAACTTATAATATCTCCCATCCCAGTGGCATAGTTCACCAAGTCCCAGTGGGCTTAAATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CAA 72 bp AGCTGTCACAACTGTCACTGGATTTCCCATGTTGGTTaGCAACATTGCAGGAAGTATGGACAATTCATCGAC +
Preference number: 6 (lower is better)
Translates to: SCHNCHWISHVG*QHCRKYGQFID
Trigger: GTCGATGAATTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAATCCAGTGACAGTTGTGACAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CAA 72 bp GTGGTAGCTGTCACAACTGTCACTGGATTTCCCATGTaGGTTTGCAACATTGCAGGAAGTATGGACAATTCA +
Preference number: 6 (lower is better)
Translates to: VVAVTTVTGFPM*VCNIAGSMDNS
Trigger: TGAATTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAATCCAGTGACAGTTGTGACAGCTACCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CAA 90 bp TTTGCAACATTGCAGGAAGTATGGACAATTCATCGACAATCTGCATaGCGCTGCTATGATTATCCAACTCCTCACTCTTGCGCTTCAATC +
Preference number: 6 (lower is better)
Translates to: FATLQEVWTIHRQSA*RCYDYPTPHSCASI
Trigger: GATTGAAGCGCAAGAGTGAGGAGTTGGATAATCATAGCAGCGCAATGCAGATTGTCGATGAATTGTCCATACTTCCTGCAATGTTGCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CAA 90 bp TTTGATCCTGTGGTAGCTGTCACAACTGTCACTGGATTTCCCATGTaGGTTTGCAACATTGCAGGAAGTATGGACAATTCATCGACAATC +
Preference number: 6 (lower is better)
Translates to: FDPVVAVTTVTGFPM*VCNIAGSMDNSSTI
Trigger: GATTGTCGATGAATTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAATCCAGTGACAGTTGTGACAGCTACCACAGGATCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CAA 90 bp CAGCTGGGGCCTGAGTTACAAGTGGAACTGTATTATCTACCCTTATaGAATAACTGGTGGGTTTACCATGTGTTGCAGGAATACCTTGAA +
Preference number: 6 (lower is better)
Translates to: QLGPELQVELYYLPL*NNWWVYHVLQEYLE
Trigger: TTCAAGGTATTCCTGCAACACATGGTAAACCCACCAGTTATTCAATAAGGGTAGATAATACAGTTCCACTTGTAACTCAGGCCCCAGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CCA 72 bp GATTTCCCATGTTGGTTTGCAACATTGCAGGAAGTATaGACAATTCATCGACAATCTGCATTGCGCTGCTAT +
Preference number: 6 (lower is better)
Translates to: DFPCWFATLQEV*TIHRQSALRCY
Trigger: ATAGCAGCGCAATGCAGATTGTCGATGAATTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CCA 72 bp AATCTTCCAGGGGCAGATCGTCCTTTTATTAATGGCTaGCATATAGAATCTGTGTTTGCCATATGCTCATCG +
Preference number: 6 (lower is better)
Translates to: NLPGADRPFING*HIESVFAICSS
Trigger: CGATGAGCATATGGCAAACACAGATTCTATATGCCAGCCATTAATAAAAGGACGATCTGCCCCTGGAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CAA 72 bp CAACTGTCACTGGATTTCCCATGTTGGTTTGCAACATaGCAGGAAGTATGGACAATTCATCGACAATCTGCA +
Preference number: 6 (lower is better)
Translates to: QLSLDFPCWFAT*QEVWTIHRQSA
Trigger: TGCAGATTGTCGATGAATTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAATCCAGTGACAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CAA 90 bp AGAAAGAGTGAATGGATTACTGGTAACACTAGTAGGAATATAAGCTaGCTGTCTTCTGTGCCCAAAGTTTCCATTCCACTCTTGATGCCC +
Preference number: 6 (lower is better)
Translates to: RKSEWITGNTSRNIS*LSSVPKVSIPLLMP
Trigger: GGGCATCAAGAGTGGAATGGAAACTTTGGGCACAGAAGACAGCAAGCTTATATTCCTACTAGTGTTACCAGTAATCCATTCACTCTTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 72 bp AACTGTCACTGGATTTCCCATGTTGGTTTGCAACATTaGAGGAAGTATGGACAATTCATCGACAATCTGCAT +
Preference number: 6 (lower is better)
Translates to: NCHWISHVGLQH*RKYGQFIDNLH
Trigger: ATGCAGATTGTCGATGAATTGTCCATACTTCCTGCAATGTTGCAAACCAACATGGGAAATCCAGTGACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CAA 72 bp GAATGGATTACTGGTAACACTAGTAGGAATATAAGCTaGCTGTCTTCTGTGCCCAAAGTTTCCATTCCACTC +
Preference number: 6 (lower is better)
Translates to: EWITGNTSRNIS*LSSVPKVSIPL
Trigger: GAGTGGAATGGAAACTTTGGGCACAGAAGACAGCAAGCTTATATTCCTACTAGTGTTACCAGTAATCCATTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CCA 72 bp TGCTGTGTGATTGGGACTTCCATGAGAAAGAGTGAATaGATTACTGGTAACACTAGTAGGAATATAAGCTTG +
Preference number: 6 (lower is better)
Translates to: CCVIGTSMRKSE*ITGNTSRNISL
Trigger: CAAGCTTATATTCCTACTAGTGTTACCAGTAATCCATTCACTCTTTCTCATGGAAGTCCCAATCACACAGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CAA 72 bp CCTGAGTTACAAGTGGAACTGTATTATCTACCCTTATaGAATAACTGGTGGGTTTACCATGTGTTGCAGGAA +
Preference number: 6 (lower is better)
Translates to: PELQVELYYLPL*NNWWVYHVLQE
Trigger: TTCCTGCAACACATGGTAAACCCACCAGTTATTCAATAAGGGTAGATAATACAGTTCCACTTGTAACTCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS TCA 72 bp GATTGTAGATATGTTGAACAAACAGTCTTTGATACATaGCTGGCCGACCCAAAGTCTATTACTTTAACCCTG +
Preference number: 6 (lower is better)
Translates to: DCRYVEQTVFDT*LADPKSITLTL
Trigger: CAGGGTTAAAGTAATAGACTTTGGGTCGGCCAGTCATGTATCAAAGACTGTTTGTTCAACATATCTACAATC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS TCA 72 bp CTGAGTTACAAGTGGAACTGTATTATCTACCCTTATTaGATAACTGGTGGGTTTACCATGTGTTGCAGGAAT +
Preference number: 6 (lower is better)
Translates to: LSYKWNCIIYPY*ITGGFTMCCRN
Trigger: ATTCCTGCAACACATGGTAAACCCACCAGTTATTCAATAAGGGTAGATAATACAGTTCCACTTGTAACTCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS GCA 72 bp GACTACTTAATGAACACATCCGATCAATATTCAAAGTaGTCTGGCAAGCTTCACAATCTAGACTACCTTTAC +
Preference number: 6 (lower is better)
Translates to: DYLMNTSDQYSK*SGKLHNLDYLY
Trigger: GTAAAGGTAGTCTAGATTGTGAAGCTTGCCAGAGCACTTTGAATATTGATCGGATGTGTTCATTAAGTAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CCA 72 bp CAAGTGGAACTGTATTATCTACCCTTATTGAATAACTaGTGGGTTTACCATGTGTTGCAGGAATACCTTGAA +
Preference number: 6 (lower is better)
Translates to: QVELYYLPLLNN*WVYHVLQEYLE
Trigger: TTCAAGGTATTCCTGCAACACATGGTAAACCCACCAGTTATTCAATAAGGGTAGATAATACAGTTCCACTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CAA 72 bp AGTACCGAGATTGTAGATATGTTGAACAAACAGTCTTaGATACATGACTGGCCGACCCAAAGTCTATTACTT +
Preference number: 6 (lower is better)
Translates to: STEIVDMLNKQS*IHDWPTQSLLL
Trigger: AAGTAATAGACTTTGGGTCGGCCAGTCATGTATCAAAGACTGTTTGTTCAACATATCTACAATCTCGGTACT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5
CDS CCA 72 bp CTTAATGAACACATCCGATCAATATTCAAAGTGCTCTaGCAAGCTTCACAATCTAGACTACCTTTACATTCT +
Preference number: 6 (lower is better)
Translates to: LNEHIRSIFKVL*QASQSRLPLHS
Trigger: AGAATGTAAAGGTAGTCTAGATTGTGAAGCTTGCCAGAGCACTTTGAATATTGATCGGATGTGTTCATTAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000303296.9
ENST00000379016.7
ENST00000456517.2
ENST00000525975.5