RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HIPK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000163349

Ensembl transcript IDs: ENST00000340480.8, ENST00000361587.3, ENST00000369553.5, ENST00000369555.6, ENST00000369558.5, ENST00000369559.8, ENST00000369561.8, ENST00000426820.7, ENST00000503968.1, ENST00000514621.5, ENST00000626993.2

Found 1506 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCTGGCTAAGGGCAGTCAAGCTTAGCCCCTCTAGTGGAGGACAATaGATGAGCAATCACAAAAGCAGGCTCAGAATGGCCAGAACTGTT +
Preference number: 1 (lower is better)
Translates to: AWLRAVKLSPSSGGQ*MSNHKSRLRMARTV
Trigger: AACAGTTCTGGCCATTCTGAGCCTGCTTTTGTGATTGCTCATCCATTGTCCTCCACTAGAGGGGCTAAGCTTGACTGCCCTTAGCCAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR GCA 90 bp CACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTCTCCTTaGAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCT +
Preference number: 1 (lower is better)
Translates to: HQTHLCKTIPRVSSP*RQCPCSFSTTVICS
Trigger: AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR TCA 90 bp AATCCTTTATGGGCAGGAATGTCCCCATCCCCAGTACCTTCTACTTaGCCCAGATCCATGCAGGAGCTGAGAGTACAAGGACAATTTCAC +
Preference number: 1 (lower is better)
Translates to: NPLWAGMSPSPVPST*PRSMQELRVQGQFH
Trigger: GTGAAATTGTCCTTGTACTCTCAGCTCCTGCATGGATCTGGGTCAAGTAGAAGGTACTGGGGATGGGGACATTCCTGCCCATAAAGGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR TCA 90 bp TCTTGGAAGCCCTTACTCCTTACAATGAAGAAACTCCAAATACTTTaGCAGCTCCTCGGTGTTCAACCTGGTACAGAGCTGGCTGACCAG +
Preference number: 1 (lower is better)
Translates to: SWKPLLLTMKKLQIL*QLLGVQPGTELADQ
Trigger: CTGGTCAGCCAGCTCTGTACCAGGTTGAACACCGAGGAGCTGTCAAAGTATTTGGAGTTTCTTCATTGTAAGGAGTAAGGGCTTCCAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR TCA 90 bp TGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCTTACAATaGAGAAACTCCAAATACTTTGACAGCTCCTCGGTGTTCAACCTG +
Preference number: 1 (lower is better)
Translates to: CTDYLPHLGSPYSLQ*RNSKYFDSSSVFNL
Trigger: CAGGTTGAACACCGAGGAGCTGTCAAAGTATTTGGAGTTTCTTCATTGTAAGGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR GCA 90 bp CCCAGAGAAAAACCTTCTGCTTCAGTGGGCCCCTGCAGAACAAGTTaGTGGCTAAGAAATTTCAAGAGGGTAAAGGAGGATCTCTCCATA +
Preference number: 1 (lower is better)
Translates to: PREKPSASVGPCRTS*WLRNFKRVKEDLSI
Trigger: TATGGAGAGATCCTCCTTTACCCTCTTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGGGCCCACTGAAGCAGAAGGTTTTTCTCTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR CCA 90 bp AGAGAAAAACCTTCTGCTTCAGTGGGCCCCTGCAGAACAAGTTGCTaGCTAAGAAATTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCC +
Preference number: 1 (lower is better)
Translates to: REKPSASVGPCRTSC*LRNFKRVKEDLSIA
Trigger: GGCTATGGAGAGATCCTCCTTTACCCTCTTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGGGCCCACTGAAGCAGAAGGTTTTTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR CCA 90 bp GAGTTCCTTGTCACCAGCGGCACCACAAAACTTCTCCTCATAGTATaGGGACATGGTAAGCAATACAACAGGCTCTTTGGTATAAACACA +
Preference number: 1 (lower is better)
Translates to: EFLVTSGTTKLLLIV*GHGKQYNRLFGINT
Trigger: TGTGTTTATACCAAAGAGCCTGTTGTATTGCTTACCATGTCCCCATACTATGAGGAGAAGTTTTGTGGTGCCGCTGGTGACAAGGAACTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR GCA 90 bp CACCTGTGCAAAACAATTCCAAGGGTCTCCTCTCCTTGCAGGCAATaGCCCTGCTCATTCAGCACTACAGTAATATGCTCTAATATAATT +
Preference number: 1 (lower is better)
Translates to: HLCKTIPRVSSPCRQ*PCSFSTTVICSNII
Trigger: AATTATATTAGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCTTGGAATTGTTTTGCACAGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR GCA 90 bp TGCAAAACAATTCCAAGGGTCTCCTCTCCTTGCAGGCAATGCCCCTaGTCATTCAGCACTACAGTAATATGCTCTAATATAATTGCAATT +
Preference number: 1 (lower is better)
Translates to: CKTIPRVSSPCRQCP*SFSTTVICSNIIAI
Trigger: AATTGCAATTATATTAGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCTTGGAATTGTTTTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR GCA 90 bp ACTTTAAAAGAATGCATATTTAATATTGGCTTGACTCCTCTCACCTaGTTCCTGAATTCTCACAGAAGCAAGGTAGCAACGCACAGTGAG +
Preference number: 1 (lower is better)
Translates to: TLKECIFNIGLTPLT*FLNSHRSKVATHSE
Trigger: CTCACTGTGCGTTGCTACCTTGCTTCTGTGAGAATTCAGGAAGCAGGTGAGAGGAGTCAAGCCAATATTAAATATGCATTCTTTTAAAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR GCA 90 bp AGTTTAGACTCCTATCTTAAGTGGTATCTGCTTATTGGACTGGGGTaGAGGAATGGGATTTGGTTTTCTTTCCTGCATCTCATTTCTTAC +
Preference number: 1 (lower is better)
Translates to: SLDSYLKWYLLIGLG*RNGIWFSFLHLISY
Trigger: GTAAGAAATGAGATGCAGGAAAGAAAACCAAATCCCATTCCTGCACCCCAGTCCAATAAGCAGATACCACTTAAGATAGGAGTCTAAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR GCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTaGAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACTG +
Preference number: 1 (lower is better)
Translates to: IFQRVTSEQSLFLGN*RRWASELFQVPKLL
Trigger: CAGTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR CCA 90 bp AGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATaGGCATCTGAACTCTTCCAAGTACCAAAATTACTGTCACAAAAA +
Preference number: 1 (lower is better)
Translates to: RVTSEQSLFLGNCRR*ASELFQVPKLLSQK
Trigger: TTTTTGTGACAGTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCTCCACGGGGGCTTGCTaGTCCATCCTAAGGCAAGCT +
Preference number: 2 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSSTGAC*SILRQA
Trigger: AGCTTGCCTTAGGATGGACCAGCAAGCCCCCGTGGA...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR TCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCGCTGACCAGGCTCCATaGAATCTCCCATCTCCATCC +
Preference number: 2 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSADQAP*NLPSPS
Trigger: GGATGGAGATGGGAGATTTCATGGAGCCTGGTCAGC...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR TCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGACTCTCACCTGCTTCCTaGATTCTCACAGAAGCAAGG +
Preference number: 2 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGLSPAS*ILTEAR
Trigger: CCTTGCTTCTGTGAGAATTCAGGAAGCAGGTGAGAG...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR TCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCAGTACCTTCTACTTaGCCCAGATCCATGCAGGAG +
Preference number: 2 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLPVPST*PRSMQE
Trigger: CTCCTGCATGGATCTGGGTCAAGTAGAAGGTACTGG...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCTCCCATCTCCATCCTaGACCTCCTTGACACCATCT +
Preference number: 2 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSLPSPS*TSLTPS
Trigger: AGATGGTGTCAAGGAGGTGCAGGATGGAGATGGGAG...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCTCCCATCTCCATCCTaGACCTCCTTGACACCATCT +
Preference number: 2 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLLPSPS*TSLTPS
Trigger: AGATGGTGTCAAGGAGGTGCAGGATGGAGATGGGAG...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR TCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGACCTCAAAAGCCTCAATaGCTCAACAGGCTTTGGTTC +
Preference number: 2 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGPQKPQ*LNRLWF
Trigger: GAACCAAAGCCTGTTGAGTCATTGAGGCTTTTGAGG...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCTGCAGGCAATGCCCCTaGTCATTCAGCACTACAGTA +
Preference number: 2 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLCRQCP*SFSTTV
Trigger: TACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCA...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTGCTTCAGTGGGCCCCTaGAGAACAAGTTGCTGGCTA +
Preference number: 2 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSASVGP*RTSCWL
Trigger: TAGCCAGCAACTTGTTCTGCAGGGGCCCACTGAAGC...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATACAGAGAAAAACCTTCTaGTTCAGTGGGCCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIQRKTF*FSGPLQ
Trigger: CTGCAGGGGCCCACTGAAGCAGAAGGTTTTTCTCTG...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAATGTGCAGGAAGGACTaGCACATGGGAAAAGGAAAA +
Preference number: 2 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGMCRKD*HMGKGK
Trigger: TTTTCCTTTTCCCATGTGGCAGTCCTTCCTGCACAT...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAGGTAACTGCAGAAGATaGGCATCTGAACTCTTCCAA +
Preference number: 2 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGGNCRR*ASELFQ
Trigger: TTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACC...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACGGGTCCACGGGGGCTTaGTGGTCCATCCTAAGGCAA +
Preference number: 2 (lower is better)
Translates to: SRHRWIFMLENRKCQFADGSTGA*WSILRQ
Trigger: TTGCCTTAGGATGGACCAGCAAGCCCCCGTGGACCC...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCTTGACTCCTCTCACCTaGTTCCTGAATTCTCACAGA +
Preference number: 2 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLLTPLT*FLNSHR
Trigger: TCTGTGAGAATTCAGGAAGCAGGTGAGAGGAGTCAA...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR CAA 90 bp TCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTCTCCTaGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTC +
Preference number: 2 (lower is better)
Translates to: SPDTPVQNNSKGLLS*QAMPLLIQHYSNML
Trigger: GAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR TCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCTGTTGGCAGGGAAACTaGGAACAATGCATTACACAA +
Preference number: 2 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSCWQGN*EQCITQ
Trigger: TTGTGTAATGCATTGTTCTCAGTTTCCCTGCCAACA...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR TCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCAAACTCCAAATACTTTaGCAGCTCCTCGGTGTTCAA +
Preference number: 2 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLKLQIL*QLLGVQ
Trigger: TTGAACACCGAGGAGCTGTCAAAGTATTTGGAGTTT...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCGAGCATTCAATTTGCTaGTGGCATACAAAGGAAGCT +
Preference number: 2 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLEHSIC*WHTKEA
Trigger: AGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTC...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCGAGCATTCAATTTGCTaGTGGCATACAAAGGAAGCT +
Preference number: 2 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSEHSIC*WHTKEA
Trigger: AGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTC...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAAGAGAGCATTCAATTTaGTGCTGGCATACAAAGGAA +
Preference number: 2 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGREHSI*CWHTKE
Trigger: TTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGCACCAGACACACCTGTaGAAAACAATTCCAAGGGTC +
Preference number: 2 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLHQTHL*KTIPRV
Trigger: GACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTG...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAGACTCCTATCTTAAGTaGTATCTGCTTATTGGACTG +
Preference number: 2 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGDSYLK*YLLIGL
Trigger: CAGTCCAATAAGCAGATACCACTTAAGATAGGAGTC...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR TCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCCAATGCAGTCAACACTaGGACAGGTTCCCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSQCSQH*DRFPQR
Trigger: TCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTG...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGCTCTTCCTTGGTAACTaGAGAAGATGGGCATCTGAA +
Preference number: 2 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLLFLGN*RRWASE
Trigger: TTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAG...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGGGTAACTGCAGAAGATaGGCATCTGAACTCTTCCAA +
Preference number: 2 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLGNCRR*ASELFQ
Trigger: TTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACC...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR CAA 90 bp AAATCCTTTATGGGCAGGAATGTCCCCATCCCCAGTACCTTCTACTaGACCCAGATCCATGCAGGAGCTGAGAGTACAAGGACAATTTCA +
Preference number: 2 (lower is better)
Translates to: KSFMGRNVPIPSTFY*TQIHAGAESTRTIS
Trigger: TGAAATTGTCCTTGTACTCTCAGCTCCTGCATGGATCTGGGTCAAGTAGAAGGTACTGGGGATGGGGACATTCCTGCCCATAAAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGCCCTGCAGAACAAGTTaGTGGCTAAGAAATTTCAAG +
Preference number: 2 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLPCRTS*WLRNFK
Trigger: CTTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGG...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAACCTTCTGCTTCAGTaGGCCCCTGCAGAACAAGTT +
Preference number: 2 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSNLLLQ*APAEQV
Trigger: AACTTGTTCTGCAGGGGCCCACTGAAGCAGAAGGTT...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAACCTTCTGCTTCAGTaGGCCCCTGCAGAACAAGTT +
Preference number: 2 (lower is better)
Translates to: SLFLGNCRRWASELFQVPNLLLQ*APAEQV
Trigger: AACTTGTTCTGCAGGGGCCCACTGAAGCAGAAGGTT...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTAACCTTCTGCTTCAGTaGGCCCCTGCAGAACAAGTT +
Preference number: 2 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPNLLLQ*APAEQV
Trigger: AACTTGTTCTGCAGGGGCCCACTGAAGCAGAAGGTT...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR TCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACGGGAAAATGCTTCTGTaGGAACTCAGCCGAGAATCC +
Preference number: 2 (lower is better)
Translates to: SRHRWIFMLENRKCQFADGKMLL*ELSRES
Trigger: GGATTCTCGGCTGAGTTCTCACAGAAGCATTTTCCC...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR TCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAGCTGACCAGGCTCCATaGAATCTCCCATCTCCATCC +
Preference number: 2 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRADQAP*NLPSPS
Trigger: GGATGGAGATGGGAGATTTCATGGAGCCTGGTCAGC...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAGGCAAAGCTCATCAATaGCAGTATCTCATAATAGAC +
Preference number: 2 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIGKAHQ*QYLIID
Trigger: GTCTATTATGAGATACTGGCATTGATGAGCTTTGCC...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTGAGCATTCAATTTGCTaGTGGCATACAAAGGAAGCT +
Preference number: 2 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSEHSIC*WHTKEA
Trigger: AGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTC...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGAGAGAGCATTCAATTTaGTGCTGGCATACAAAGGAA +
Preference number: 2 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLREHSI*CWHTKE
Trigger: TTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCAGAACAAGTTGCTaGCTAAGAAATTTCAAGAGG +
Preference number: 2 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVICRTSC*LRNFKR
Trigger: CCTCTTGAAATTTCTTAGCCAGCAACTTGTTCTGCA...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR TCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGACAATGCAGTCAACACTaGGACAGGTTCCCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRQCSQH*DRFPQR
Trigger: TCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTG...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR TCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGAAACACAGGAGCAATTaGGAGAATCTCAATAGTAAC +
Preference number: 2 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLKHRSN*ENLNSN
Trigger: GTTACTATTGAGATTCTCTCAATTGCTCCTGTGTTT...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR TCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGATGGTACAGAGCTGGCTaGCCAGGCTCCATGAAATCT +
Preference number: 2 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRWYRAG*PGSMKS
Trigger: AGATTTCATGGAGCCTGGTCAGCCAGCTCTGTACCA...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGACAGAGAAAAACCTTCTaGTTCAGTGGGCCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRQRKTF*FSGPLQ
Trigger: CTGCAGGGGCCCACTGAAGCAGAAGGTTTTTCTCTG...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGACTCCCATCTCCATCCTaGACCTCCTTGACACCATCT +
Preference number: 2 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRLPSPS*TSLTPS
Trigger: AGATGGTGTCAAGGAGGTGCAGGATGGAGATGGGAG...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR TCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGACAATGCAGTCAACACTaGGACAGGTTCCCCCAGAGA +
Preference number: 2 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRQCSQH*DRFPQR
Trigger: TCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTG...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGACAGAGAAAAACCTTCTaGTTCAGTGGGCCCCTGCAG +
Preference number: 2 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRQRKTF*FSGPLQ
Trigger: CTGCAGGGGCCCACTGAAGCAGAAGGTTTTTCTCTG...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTCAGCAAATGGTGAGCTaGCTTTTAAACACTACTTTA +
Preference number: 2 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSQQMVS*LLNTTL
Trigger: TAAAGTAGTGTTTAAAAGGCAGCTCACCATTTGCTG...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGATCCCCAAATCCTTTATaGGCAGGAATGTCCCCATCC +
Preference number: 2 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRSPNPL*AGMSPS
Trigger: GGATGGGGACATTCCTGCCCATAAAGGATTTGGGGA...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGACTACCTGCCCCATCTTaGAAGCCCTTACTCCTTACA +
Preference number: 2 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRLPAPS*KPLLLT
Trigger: TGTAAGGAGTAAGGGCTTCCAAGATGGGGCAGGTAG...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR CAA 90 bp TCAGAATGGCCAGAACTGTTTGAAATGGAGTTCTTATTCCTGGGGTaGGTATTTCAGCTGAGCACTGAAAATAATATCACCTCCTGGGAG +
Preference number: 2 (lower is better)
Translates to: SEWPELFEMEFLFLG*VFQLSTENNITSWE
Trigger: CTCCCAGGAGGTGATATTATTTTCAGTGCTCAGCTGAAATACCAACCCCAGGAATAAGAACTCCATTTCAAACAGTTCTGGCCATTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR TCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAGATCCATGCAGGAGCTaGGAGTACAAGGACAATTTC +
Preference number: 2 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRDPCRS*EYKDNF
Trigger: GAAATTGTCCTTGTACTCTCAGCTCCTGCATGGATC...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACCCCTGCAGAACAAGTTaGTGGCTAAGAAATTTCAAG +
Preference number: 2 (lower is better)
Translates to: SRHRWIFMLENRKCQFADPCRTS*WLRNFK
Trigger: CTTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGG...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCCCTGCAGAACAAGTTaGTGGCTAAGAAATTTCAAG +
Preference number: 2 (lower is better)
Translates to: SEQSLFLGNCRRWASELFPCRTS*WLRNFK
Trigger: CTTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGG...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTGGCAAAGCTCATCAATaGCAGTATCTCATAATAGAC +
Preference number: 2 (lower is better)
Translates to: QWRHQSISGITLEDHIHTGKAHQ*QYLIID
Trigger: GTCTATTATGAGATACTGGCATTGATGAGCTTTGCC...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTGGCAAAGCTCATCAATaGCAGTATCTCATAATAGAC +
Preference number: 2 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPGKAHQ*QYLIID
Trigger: GTCTATTATGAGATACTGGCATTGATGAGCTTTGCC...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACGAGCATTCAATTTGCTaGTGGCATACAAAGGAAGCT +
Preference number: 2 (lower is better)
Translates to: SRHRWIFMLENRKCQFADEHSIC*WHTKEA
Trigger: AGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTC...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGGTGACCCAGGCCAGCTaGTCACTAAATTCACCAGGC +
Preference number: 2 (lower is better)
Translates to: SSVILRNYLFLEACCKRKVTQAS*SLNSPG
Trigger: GCCTGGTGAATTTAGTGAGCAGCTGGCCTGGGTCAC...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTTGCAGAACAAGTTGCTaGCTAAGAAATTTCAAGAGG +
Preference number: 2 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLCRTSC*LRNFKR
Trigger: CCTCTTGAAATTTCTTAGCCAGCAACTTGTTCTGCA...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAAACCTTCTGCTTCAGTaGGCCCCTGCAGAACAAGTT +
Preference number: 2 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRNLLLQ*APAEQV
Trigger: AACTTGTTCTGCAGGGGCCCACTGAAGCAGAAGGTT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACCCCTGCAGAACAAGTTaGTGGCTAAGAAATTTCAAG +
Preference number: 2 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYPCRTS*WLRNFK
Trigger: CTTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGG...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCTGCAGAACAAGTTGCTaGCTAAGAAATTTCAAGAGG +
Preference number: 2 (lower is better)
Translates to: SEQSLFLGNCRRWASELFCRTSC*LRNFKR
Trigger: CCTCTTGAAATTTCTTAGCCAGCAACTTGTTCTGCA...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTGCAGAACAAGTTGCTaGCTAAGAAATTTCAAGAGG +
Preference number: 2 (lower is better)
Translates to: SRHRWIFMLENRKCQFADCRTSC*LRNFKR
Trigger: CCTCTTGAAATTTCTTAGCCAGCAACTTGTTCTGCA...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR TCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTATCAGCATTTTTCCTaGCCAGCAATCACAATAACA +
Preference number: 2 (lower is better)
Translates to: SRHRWIFMLENRKCQFADYQHFS*PAITIT
Trigger: TGTTATTGTGATTGCTGGTCAGGAAAAATGCTGATA...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAGAGCATTCAATTTGCTaGTGGCATACAAAGGAAGCT +
Preference number: 2 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLREHSIC*WHTKEA
Trigger: AGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTC...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACAACCTTCTGCTTCAGTaGGCCCCTGCAGAACAAGTT +
Preference number: 2 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHNLLLQ*APAEQV
Trigger: AACTTGTTCTGCAGGGGCCCACTGAAGCAGAAGGTT...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGACTTCTCCTCATAGTATaGGGACATGGTAAGCAATAC +
Preference number: 2 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRLLLIV*GHGKQY
Trigger: GTATTGCTTACCATGTCCCCATACTATGAGGAGAAG...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGTCCCCAAATCCTTTATaGGCAGGAATGTCCCCATCC +
Preference number: 2 (lower is better)
Translates to: SSVILRNYLFLEACCKRKSPNPL*AGMSPS
Trigger: GGATGGGGACATTCCTGCCCATAAAGGATTTGGGGA...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGCTACCTGCCCCATCTTaGAAGCCCTTACTCCTTACA +
Preference number: 2 (lower is better)
Translates to: SSVILRNYLFLEACCKRKLPAPS*KPLLLT
Trigger: TGTAAGGAGTAAGGGCTTCCAAGATGGGGCAGGTAG...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGATTACTGTGCTTGCCTaGCTAAGGGCAGTCAAGCTT +
Preference number: 2 (lower is better)
Translates to: SSVILRNYLFLEACCKRKITVLA*LRAVKL
Trigger: AAGCTTGACTGCCCTTAGCCAGGCAAGCACAGTAAT...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGCTCTTCCTTGGTAACTaGAGAAGATGGGCATCTGAA +
Preference number: 2 (lower is better)
Translates to: SSVILRNYLFLEACCKRKLFLGN*RRWASE
Trigger: TTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAG...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGCAGAACAAGTTGCTaGCTAAGAAATTTCAAGAGG +
Preference number: 2 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRCRTSC*LRNFKR
Trigger: CCTCTTGAAATTTCTTAGCCAGCAACTTGTTCTGCA...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAGGCAAAGCTCATCAATaGCAGTATCTCATAATAGAC +
Preference number: 2 (lower is better)
Translates to: REHSICCWHTKEATLKYKGKAHQ*QYLIID
Trigger: GTCTATTATGAGATACTGGCATTGATGAGCTTTGCC...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR GCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGAAGAAAATCAGAATGTaGTTGGCAAAAAGGAGACAC +
Preference number: 2 (lower is better)
Translates to: SSVILRNYLFLEACCKRKKKIRM*LAKRRH
Trigger: GTGTCTCCTTTTTGCCAAGCACATTCTGATTTTCTT...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGAACAATACAAGCTCTTaGTATTATCCTTTTCTGTGG +
Preference number: 2 (lower is better)
Translates to: SSVILRNYLFLEACCKRKNNTSS*YYPFLW
Trigger: CCACAGAAAAGGATAATACCAAGAGCTTGTATTGTT...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAAGGGTCCACGGGGGCTaGCTGGTCCATCCTAAGGCA +
Preference number: 3 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGRVHGG*LVHPKA
Trigger: TGCCTTAGGATGGACCAGCAAGCCCCCGTGGACCCT...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAAAGGGTCTCCTCTCCTaGCAGGCAATGCCCCTGCTC +
Preference number: 3 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGKGLLS*QAMPLL
Trigger: GAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCTT...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGACTTTCTGTGAGTTCCTaGTCACCAGCGGCACCACAA +
Preference number: 3 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGLSVSS*SPAAPQ
Trigger: TTGTGGTGCCGCTGGTGACAAGGAACTCACAGAAAG...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAAGTGGTATCTGCTTATaGGACTGGGGTGCAGGAATG +
Preference number: 3 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGSGICL*DWGAGM
Trigger: CATTCCTGCACCCCAGTCCAATAAGCAGATACCACT...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCATCCTGCACCTCCTaGACACCATCTCTATCTACA +
Preference number: 3 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLPSCTS*TPSLST
Trigger: TGTAGATAGAGATGGTGTCAAGGAGGTGCAGGATGG...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR CCA 72 bp AGGGCAGTCAAGCTTAGCCCCTCTAGTGGAGGACAATaGATGAGCAATCACAAAAGCAGGCTCAGAATGGCC +
Preference number: 3 (lower is better)
Translates to: RAVKLSPSSGGQ*MSNHKSRLRMA
Trigger: GGCCATTCTGAGCCTGCTTTTGTGATTGCTCATCCATTGTCCTCCACTAGAGGGGCTAAGCTTGACTGCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACAGGGTCCACGGGGGCTaGCTGGTCCATCCTAAGGCA +
Preference number: 3 (lower is better)
Translates to: SRHRWIFMLENRKCQFADRVHGG*LVHPKA
Trigger: TGCCTTAGGATGGACCAGCAAGCCCCCGTGGACCCT...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCCCTGCAGAACAAGTaGCTGGCTAAGAAATTTCAA +
Preference number: 3 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLPLQNK*LAKKFQ
Trigger: TTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGGG...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACAAGGGTCTCCTCTCCTaGCAGGCAATGCCCCTGCTC +
Preference number: 3 (lower is better)
Translates to: SRHRWIFMLENRKCQFADKGLLS*QAMPLL
Trigger: GAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCTT...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR TCA 72 bp CAGTCAAGCTTAGCCCCTCTAGTGGAGGACAATGGATaGGCAATCACAAAAGCAGGCTCAGAATGGCCAGAA +
Preference number: 3 (lower is better)
Translates to: QSSLAPLVEDNG*AITKAGSEWPE
Trigger: TTCTGGCCATTCTGAGCCTGCTTTTGTGATTGCTCATCCATTGTCCTCCACTAGAGGGGCTAAGCTTGACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR CCA 72 bp CCTTCTGCTTCAGTGGGCCCCTGCAGAACAAGTTGCTaGCTAAGAAATTTCAAGAGGGTAAAGGAGGATCTC +
Preference number: 3 (lower is better)
Translates to: PSASVGPCRTSC*LRNFKRVKEDL
Trigger: GAGATCCTCCTTTACCCTCTTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGGGCCCACTGAAGCAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAAAGGGTCTCCTCTCCTaGCAGGCAATGCCCCTGCTC +
Preference number: 3 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRKGLLS*QAMPLL
Trigger: GAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCTT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCATGACTCAACAGGCTTaGGTTCCTTCTCTATATTCT +
Preference number: 3 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLMTQQA*VPSLYS
Trigger: AGAATATAGAGAAGGAACCAAAGCCTGTTGAGTCAT...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR TCA 72 bp AATATCACCTCCTGGGAGCTATTAAAAACTCTGGAGTaGCCAAGTGTCCCTATGAGCCCAGAGTGGCTACAC +
Preference number: 3 (lower is better)
Translates to: NITSWELLKTLE*PSVPMSPEWLH
Trigger: GTGTAGCCACTCTGGGCTCATAGGGACACTTGGTCACTCCAGAGTTTTTAATAGCTCCCAGGAGGTGATATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR CCA 72 bp GTCACCAGCGGCACCACAAAACTTCTCCTCATAGTATaGGGACATGGTAAGCAATACAACAGGCTCTTTGGT +
Preference number: 3 (lower is better)
Translates to: VTSGTTKLLLIV*GHGKQYNRLFG
Trigger: ACCAAAGAGCCTGTTGTATTGCTTACCATGTCCCCATACTATGAGGAGAAGTTTTGTGGTGCCGCTGGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAAAGAGAGCATTCAATTaGCTGCTGGCATACAAAGGA +
Preference number: 3 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIKRAFN*LLAYKG
Trigger: TCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCTT...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACCTTTCTGTGAGTTCCTaGTCACCAGCGGCACCACAA +
Preference number: 3 (lower is better)
Translates to: SRHRWIFMLENRKCQFADLSVSS*SPAAPQ
Trigger: TTGTGGTGCCGCTGGTGACAAGGAACTCACAGAAAG...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR TCA 72 bp CTCCATGAAATCTCCCATCTCCATCCTGCACCTCCTTaGCACCATCTCTATCTACACAGAACCAGTCCTAAA +
Preference number: 3 (lower is better)
Translates to: LHEISHLHPAPP*HHLYLHRTSPK
Trigger: TTTAGGACTGGTTCTGTGTAGATAGAGATGGTGTCAAGGAGGTGCAGGATGGAGATGGGAGATTTCATGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR TCA 72 bp TACCTGCCCCATCTTGGAAGCCCTTACTCCTTACAATaGAGAAACTCCAAATACTTTGACAGCTCCTCGGTG +
Preference number: 3 (lower is better)
Translates to: YLPHLGSPYSLQ*RNSKYFDSSSV
Trigger: CACCGAGGAGCTGTCAAAGTATTTGGAGTTTCTTCATTGTAAGGAGTAAGGGCTTCCAAGATGGGGCAGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR GCA 72 bp AAACCTTCTGCTTCAGTGGGCCCCTGCAGAACAAGTTaGTGGCTAAGAAATTTCAAGAGGGTAAAGGAGGAT +
Preference number: 3 (lower is better)
Translates to: KPSASVGPCRTS*WLRNFKRVKED
Trigger: ATCCTCCTTTACCCTCTTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGGGCCCACTGAAGCAGAAGGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR GCA 72 bp AAAACAATTCCAAGGGTCTCCTCTCCTTGCAGGCAATaGCCCTGCTCATTCAGCACTACAGTAATATGCTCT +
Preference number: 3 (lower is better)
Translates to: KTIPRVSSPCRQ*PCSFSTTVICS
Trigger: AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCTTGGAATTGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR CCA 72 bp ATAATGCTGAACAAAACACACATTACTGTGCTTGCCTaGCTAAGGGCAGTCAAGCTTAGCCCCTCTAGTGGA +
Preference number: 3 (lower is better)
Translates to: IMLNKTHITVLA*LRAVKLSPSSG
Trigger: TCCACTAGAGGGGCTAAGCTTGACTGCCCTTAGCCAGGCAAGCACAGTAATGTGTGTTTTGTTCAGCATTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCACCCCTGCAGAACAAGTaGCTGGCTAAGAAATTTCAA +
Preference number: 3 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAPLQNK*LAKKFQ
Trigger: TTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGGG...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTCCCCTGCAGAACAAGTaGCTGGCTAAGAAATTTCAA +
Preference number: 3 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLPLQNK*LAKKFQ
Trigger: TTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGGG...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR TCA 72 bp CAAACTTTGGGAAGACTACAACAATGCAGTCAACACTaGGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTC +
Preference number: 3 (lower is better)
Translates to: QTLGRLQQCSQH*DRFPQRKTFCF
Trigger: GAAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR TCA 72 bp CCCTTACTCCTTACAATGAAGAAACTCCAAATACTTTaGCAGCTCCTCGGTGTTCAACCTGGTACAGAGCTG +
Preference number: 3 (lower is better)
Translates to: PLLLTMKKLQIL*QLLGVQPGTEL
Trigger: CAGCTCTGTACCAGGTTGAACACCGAGGAGCTGTCAAAGTATTTGGAGTTTCTTCATTGTAAGGAGTAAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR GCA 72 bp ATTCCAAGGGTCTCCTCTCCTTGCAGGCAATGCCCCTaGTCATTCAGCACTACAGTAATATGCTCTAATATA +
Preference number: 3 (lower is better)
Translates to: IPRVSSPCRQCP*SFSTTVICSNI
Trigger: TATATTAGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCTTGGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACCCCCTGCAGAACAAGTaGCTGGCTAAGAAATTTCAA +
Preference number: 3 (lower is better)
Translates to: SRHRWIFMLENRKCQFADPLQNK*LAKKFQ
Trigger: TTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGGG...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACGTGCAGGAATGGGATTaGGTTTTCTTTCCTGCATCT +
Preference number: 3 (lower is better)
Translates to: SRHRWIFMLENRKCQFADVQEWD*VFFPAS
Trigger: AGATGCAGGAAAGAAAACCAAATCCCATTCCTGCAC...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAAGTGGTATCTGCTTATaGGACTGGGGTGCAGGAATG +
Preference number: 3 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRSGICL*DWGAGM
Trigger: CATTCCTGCACCCCAGTCCAATAAGCAGATACCACT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR GCA 72 bp AGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTaGAGAAGATGGGCATCTGAACTCTTCCAAGTACCA +
Preference number: 3 (lower is better)
Translates to: RVTSEQSLFLGN*RRWASELFQVP
Trigger: TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR GCA 72 bp TCCTATCTTAAGTGGTATCTGCTTATTGGACTGGGGTaGAGGAATGGGATTTGGTTTTCTTTCCTGCATCTC +
Preference number: 3 (lower is better)
Translates to: SYLKWYLLIGLG*RNGIWFSFLHL
Trigger: GAGATGCAGGAAAGAAAACCAAATCCCATTCCTGCACCCCAGTCCAATAAGCAGATACCACTTAAGATAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR CCA 72 bp TATCCTTTTCTGTGGAGTTTAGACTCCTATCTTAAGTaGTATCTGCTTATTGGACTGGGGTGCAGGAATGGG +
Preference number: 3 (lower is better)
Translates to: YPFLWSLDSYLK*YLLIGLGCRNG
Trigger: CCCATTCCTGCACCCCAGTCCAATAAGCAGATACCACTTAAGATAGGAGTCTAAACTCCACAGAAAAGGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACCCCCTGCAGAACAAGTaGCTGGCTAAGAAATTTCAA +
Preference number: 3 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYPLQNK*LAKKFQ
Trigger: TTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGGG...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTAAAATAGGGCAAACTTaGGGAAGACTACAACAATGC +
Preference number: 3 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPKIGQT*GRLQQC
Trigger: GCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTT...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACAAGAGAGCATTCAATTaGCTGCTGGCATACAAAGGA +
Preference number: 3 (lower is better)
Translates to: SRHRWIFMLENRKCQFADKRAFN*LLAYKG
Trigger: TCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCTT...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACATATTTAATATTGGCTaGACTCCTCTCACCTGCTTC +
Preference number: 3 (lower is better)
Translates to: SRHRWIFMLENRKCQFADIFNIG*TPLTCF
Trigger: GAAGCAGGTGAGAGGAGTCAAGCCAATATTAAATAT...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAGAAACTCCAAATACTTaGACAGCTCCTCGGTGTTCA +
Preference number: 3 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRETPNT*TAPRCS
Trigger: TGAACACCGAGGAGCTGTCAAAGTATTTGGAGTTTC...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR CCA 72 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATaGGCATCTGAACTCTTCCAAGTACCAAAATTACTG +
Preference number: 3 (lower is better)
Translates to: SEQSLFLGNCRR*ASELFQVPKLL
Trigger: CAGTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR CCA 72 bp CATACACATTCAGCAGACACAGGTGGATTTTTATGCTaGAAAATCGGAAATGCCAGTTTGCAGACTAAGACT +
Preference number: 3 (lower is better)
Translates to: HTHSADTGGFLC*KIGNASLQTKT
Trigger: AGTCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCTGAATGTGTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAAAGAGAGCATTCAATTaGCTGCTGGCATACAAAGGA +
Preference number: 3 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRKRAFN*LLAYKG
Trigger: TCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCTT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACAAAATCAGAATGTGCTaGGCAAAAAGGAGACACAAA +
Preference number: 3 (lower is better)
Translates to: SRHRWIFMLENRKCQFADKIRMC*AKRRHK
Trigger: TTTGTGTCTCCTTTTTGCCAAGCACATTCTGATTTT...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAATGACTCAACAGGCTTaGGTTCCTTCTCTATATTCT +
Preference number: 3 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRMTQQA*VPSLYS
Trigger: AGAATATAGAGAAGGAACCAAAGCCTGTTGAGTCAT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAAACTGCTTGGCTATCTaGACCAATATAGTGCTGAAA +
Preference number: 3 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRNCLAI*TNIVLK
Trigger: TTTCAGCACTATATTGGTCAAGATAGCCAAGCAGTT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGGAAACTCCAAATACTTaGACAGCTCCTCGGTGTTCA +
Preference number: 3 (lower is better)
Translates to: SSVILRNYLFLEACCKRKETPNT*TAPRCS
Trigger: TGAACACCGAGGAGCTGTCAAAGTATTTGGAGTTTC...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGAAAATAGGGCAAACTTaGGGAAGACTACAACAATGC +
Preference number: 3 (lower is better)
Translates to: SSVILRNYLFLEACCKRKKIGQT*GRLQQC
Trigger: GCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTT...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGAATGGCCAGAACTGTTaGAAATGGAGTTCTTATTCC +
Preference number: 3 (lower is better)
Translates to: SSVILRNYLFLEACCKRKNGQNC*KWSSYS
Trigger: GGAATAAGAACTCCATTTCAAACAGTTCTGGCCATT...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR-3UTR CAA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGAAAATCAGAATGTGCTaGGCAAAAAGGAGACACAAA +
Preference number: 3 (lower is better)
Translates to: SSVILRNYLFLEACCKRKKIRMC*AKRRHK
Trigger: TTTGTGTCTCCTTTTTGCCAAGCACATTCTGATTTT...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCGCCGGCCGGCCGGCTaGGCAGCTCAGAGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSRRPAG*AAQSKG
Trigger: CCCTTTACTCTGAGCTGCGCAGCCGGCCGGCCGGCG...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCGCCGGCCGGCCGGCTaGGCAGCTCAGAGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLRRPAG*AAQSKG
Trigger: CCCTTTACTCTGAGCTGCGCAGCCGGCCGGCCGGCG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
CDS-3UTR TCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCACGCTGGCAGAAGTaGGGAGGCTGGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLPRWQK*GGWAQH
Trigger: GTGTTGGGCCCAGCCTCCTCACTTCTGCCAGCGTGG...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAGAGGTCAGGTCACTGTaGCCCAGGCCAGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGEVRSL*PRPAAH
Trigger: GTGAGCAGCTGGCCTGGGTCACAGTGACCTGACCTC...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCAGATGAGCCTGGCTTaGCAGGTGAGCAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSQMSLA*QVSRGR
Trigger: CCGGCCCCTGCTCACCTGCCAAGCCAGGCTCATCTG...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGATGCAGTAGGAGTCGGTaGGCCTCGAGTAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGCSRSR*ASSRWA
Trigger: GGCCCACCTACTCGAGGCCCACCGACTCCTACTGCA...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTTCTCAGCCGCGAGCTaGGGCTGCCGTGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPFSAAS*GCREEA
Trigger: CGCCTCCTCACGGCAGCCCCAGCTCGCGGCTGAGAA...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369555.6
ENST00000369558.5
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTTCTCAGCCGCGAGCTaGGGCTGCCGTGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLFSAAS*GCREEA
Trigger: CGCCTCCTCACGGCAGCCCCAGCTCGCGGCTGAGAA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
CDS-3UTR TCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCGGCAGGAGAATTTGCTaGGTCCCTCCAGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSGRRIC*VPPGHA
Trigger: GGCGTGGCCTGGAGGGACTCAGCAAATTCTCCTGCC...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGCTGGGCCCAACACTaGCAGGGACCTGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSGWAQH*QGPGAP
Trigger: TGGTGCACCAGGTCCCTGTCAGTGTTGGGCCCAGCC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACCACGCTGGCAGAAGTaGGGAGGCTGGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSPRWQK*GGWAQH
Trigger: GTGTTGGGCCCAGCCTCCTCACTTCTGCCAGCGTGG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGCGCCGGCCGGCCGGCTaGGCAGCTCAGAGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKRRPAG*AAQSKG
Trigger: CCCTTTACTCTGAGCTGCGCAGCCGGCCGGCCGGCG...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369558.5
ENST00000426820.7
CDS-3UTR GCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGACTCCAGTCAGCTAGCTaGTGTCCACTCCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGLQSAS*CPLPMA
Trigger: GGCCATGGGGAGTGGACAGCAGCTAGCTGACTGGAG...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGGGGCAAGGTGTGGGTaGCCTGTCGAGTGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLGARCG*PVECSG
Trigger: CCCGCTACACTCGACAGGGCACCCACACCTTGCCCC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGGGCAAGGTGTGGGTaGCCTGTCGAGTGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSGARCG*PVECSG
Trigger: CCCGCTACACTCGACAGGGCACCCACACCTTGCCCC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCAGATGAGCCTGGCTTaGCAGGTGAGCAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLQMSLA*QVSRGR
Trigger: CCGGCCCCTGCTCACCTGCCAAGCCAGGCTCATCTG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTATCGAGTGCGGGGCCTaGACTTCCCGCCCCCTCCGC +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSIECGA*TSRPLR
Trigger: GCGGAGGGGGCGGGAAGTCCAGGCCCCGCACTCGAT...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGGGCCTCGAGTAGGTaGGCCTCCGTAGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSWASSR*ASVGSQ
Trigger: CTGGCTCCCTACGGAGGCCCACCTACTCGAGGCCCA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACTCCACTGCAGGAGCTaGGAGGAGGAGGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSLHCRS*EEEALV
Trigger: GACCAGGGCCTCCTCCTCCCAGCTCCTGCAGTGGAG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGCAGGAGAATTTGCTaGGTCCCTCCAGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSGRRIC*VPPGHA
Trigger: GGCGTGGCCTGGAGGGACTCAGCAAATTCTCCTGCC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCGGTTGGAGCCGCCGATaGCTGCTGGTTCTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSGWSRR*LLVLAK
Trigger: CTTAGCCAGAACCAGCAGTCATCGGCGGCTCCAACC...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGGGCTGGGCCCAACACTaGCAGGGACCTGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLGWAQH*QGPGAP
Trigger: TGGTGCACCAGGTCCCTGTCAGTGTTGGGCCCAGCC...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGAGGTCAGGTCACTGTaGCCCAGGCCAGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLEVRSL*PRPAAH
Trigger: GTGAGCAGCTGGCCTGGGTCACAGTGACCTGACCTC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGATGGCTGAGCAGCTGGTaGCTGGGGTACAATCGGTAC +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGWLSSW*LGYNRY
Trigger: GTACCGATTGTACCCCAGGCACCAGCTGCTCAGCCA...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCCTCCAGGCCACGCCTaGAGTACAGCGGCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLPPGHA*STAAVC
Trigger: ACAGACTGCCGCTGTACTGCAGGCGTGGCCTGGAGG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
CDS-3UTR GCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGCCAGCGTGGATCGAGTaGGGGGCCTGGACTTCCCGC +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKPAWIE*GAWTSR
Trigger: GCGGGAAGTCCAGGCCCCGCACTCGATCCACGCTGG...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGCGTAGGGAGCCAGCGTaGATCGAGTGCGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQRREPA*IECGAW
Trigger: CCAGGCCCCGCACTCGATCCACGCTGGCTCCCTACG...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGTTCTCAGCCGCGAGCTaGGGCTGCCGTGAGGAGGCG +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKFSAAS*GCREEA
Trigger: CGCCTCCTCACGGCAGCCCCAGCTCGCGGCTGAGAA...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369555.6
ENST00000369558.5
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATACCGCCGGTGTGTCTaGTTCTCAGCCGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSYRRCV*FSAASW
Trigger: CCAGCTCGCGGCTGAGAACCAGACACACCGGCGGTA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGTTGGAGCCGCCGATaGCTGCTGGTTCTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSGWSRR*LLVLAK
Trigger: CTTAGCCAGAACCAGCAGTCATCGGCGGCTCCAACC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCCACGCTGGCAGAAGTaGGGAGGCTGGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMPRWQK*GGWAQH
Trigger: GTGTTGGGCCCAGCCTCCTCACTTCTGCCAGCGTGG...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAACTGGTGTTGGTACTaGGCAGGGGCCACGCTGGCA +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLNWCWY*AGATLA
Trigger: TGCCAGCGTGGCCCCTGCTCAGTACCAACACCAGTT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCACGCCGGCCGGCCGGCTaGGCAGCTCAGAGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPRRPAG*AAQSKG
Trigger: CCCTTTACTCTGAGCTGCGCAGCCGGCCGGCCGGCG...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369558.5
ENST00000426820.7
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCCTCCAGTCAGCTAGCTaGTGTCCACTCCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPLQSAS*CPLPMA
Trigger: GGCCATGGGGAGTGGACAGCAGCTAGCTGACTGGAG...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCTCCAGTCAGCTAGCTaGTGTCCACTCCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLLQSAS*CPLPMA
Trigger: GGCCATGGGGAGTGGACAGCAGCTAGCTGACTGGAG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGGGGGCAAGGTGTGGGTaGCCTGTCGAGTGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMGARCG*PVECSG
Trigger: CCCGCTACACTCGACAGGGCACCCACACCTTGCCCC...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGGGGCAAGGTGTGGGTaGCCTGTCGAGTGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQGARCG*PVECSG
Trigger: CCCGCTACACTCGACAGGGCACCCACACCTTGCCCC...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTGGGGCAAGGTGTGGGTaGCCTGTCGAGTGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSGARCG*PVECSG
Trigger: CCCGCTACACTCGACAGGGCACCCACACCTTGCCCC...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAGCTGTCCACTCCCCATaGCCTCTGGAATCATTGCTG +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGAVHSP*PLESLL
Trigger: CAGCAATGATTCCAGAGGCCATGGGGAGTGGACAGC...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGCAGATGAGCCTGGCTTaGCAGGTGAGCAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQQMSLA*QVSRGR
Trigger: CCGGCCCCTGCTCACCTGCCAAGCCAGGCTCATCTG...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCAGTAGGAGTCGGTaGGCCTCGAGTAGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVICSRSR*ASSRWA
Trigger: GGCCCACCTACTCGAGGCCCACCGACTCCTACTGCA...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCCTGGTGAGAGGAGTTaGCTTGCCCTTGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSPGERS*LALVWL
Trigger: CAGCCACACAAGGGCAAGCCAACTCCTCTCACCAGG...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCTGGTGAGAGGAGTTaGCTTGCCCTTGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLPGERS*LALVWL
Trigger: CAGCCACACAAGGGCAAGCCAACTCCTCTCACCAGG...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCACTGCAGGAGCTaGGAGGAGGAGGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMLHCRS*EEEALV
Trigger: GACCAGGGCCTCCTCCTCCCAGCTCCTGCAGTGGAG...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCGTGATGGTGGCTACTTaGGGGTGGAGAGTTGCTACC +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSVMVAT*GWRVAT
Trigger: GGTAGCAACTCTCCACCCTCAAGTAGCCACCATCAC...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACCGCATACTGCGGTGTaGTGGTGGCTACTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSPHTAV*WWLLEG
Trigger: ACCCTCAAGTAGCCACCATCACACCGCAGTATGCGG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
CDS-3UTR TCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCTGTACTGGTTGCCATaGGAGTGGGCATTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSLYWLP*EWAFLQ
Trigger: CTGGAGGAATGCCCACTCTCATGGCAACCAGTACAG...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCATTGCTCAGGAGACCTaGGGCCTGGGTTGCTACAGT +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLIAQET*GLGCYS
Trigger: ACTGTAGCAACCCAGGCCTCAGGTCTCCTGAGCAAT...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCATTGCTCAGGAGACCTaGGGCCTGGGTTGCTACAGT +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSIAQET*GLGCYS
Trigger: ACTGTAGCAACCCAGGCCTCAGGTCTCCTGAGCAAT...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAGATACCCTGTGGGGGTaGTACAGCATCCAGATGACT +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGDTLWG*YSIQMT
Trigger: AGTCATCTGGATGCTGTATCACCCCCACAGGGTATC...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAGGTTGGAGCCGCCGATaGCTGCTGGTTCTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIGWSRR*LLVLAK
Trigger: CTTAGCCAGAACCAGCAGTCATCGGCGGCTCCAACC...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGAACTGGTGTTGGTACTaGGCAGGGGCCACGCTGGCA +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLNWCWY*AGATLA
Trigger: TGCCAGCGTGGCCCCTGCTCAGTACCAACACCAGTT...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAAACTGGTGTTGGTACTaGGCAGGGGCCACGCTGGCA +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVINWCWY*AGATLA
Trigger: TGCCAGCGTGGCCCCTGCTCAGTACCAACACCAGTT...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCGGTAGCAACGCACAGTaGGAGAGCCACATGGGGAAA +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLGSNAQ*ESHMGK
Trigger: TTTCCCCATGTGGCTCTCTCACTGTGCGTTGCTACC...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCAGAGTGGCTACACTaGACCCTTCTCCGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLPEWLH*TLLRFF
Trigger: GAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGG...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGGCACTCGACGACACTaGTGGGGGCGAAAACACTTG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLGTRRH*WGRKHL
Trigger: CAAGTGTTTTCGCCCCCATCAGTGTCGTCGAGTGCC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTGGCTGAGCAGCTGGTaGCTGGGGTACAATCGGTAC +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPWLSSW*LGYNRY
Trigger: GTACCGATTGTACCCCAGGCACCAGCTGCTCAGCCA...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTGGCTGAGCAGCTGGTaGCTGGGGTACAATCGGTAC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLWLSSW*LGYNRY
Trigger: GTACCGATTGTACCCCAGGCACCAGCTGCTCAGCCA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGGCTGAGCAGCTGGTaGCTGGGGTACAATCGGTAC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSWLSSW*LGYNRY
Trigger: GTACCGATTGTACCCCAGGCACCAGCTGCTCAGCCA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCATCTGCCACAACTCTaGCAGGCCCCTCCAAAACGG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLHLPQL*QAPPKR
Trigger: CCGTTTTGGAGGGGCCTGGCAGAGTTGTGGCAGATG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCGGAGCCGCCGATGACTaGTGGTTCTGGCTAAGATTG +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLGAADD*WFWLRL
Trigger: CAATCTTAGCCAGAACCAGCAGTCATCGGCGGCTCC...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATCGAGTGTAGCGGGCTaGCATGCTGGAAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSSSVAG*HAGRCR
Trigger: CCTACACCTTCCAGCATGGCAGCCCGCTACACTCGA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGGGGTCCACGGGGGCTTaGTGGTCCATCCTAAGGCAA +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLGSTGA*WSILRQ
Trigger: TTGCCTTAGGATGGACCAGCAAGCCCCCGTGGACCC...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCGCTGTACGGACTACCTaGCCCATCTTGGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLAVRTT*PILEAL
Trigger: AAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGC...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTCCAGCGTGGATCGAGTaGGGGGCCTGGACTTCCCGC +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPPAWIE*GAWTSR
Trigger: GCGGGAAGTCCAGGCCCCGCACTCGATCCACGCTGG...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAGGGGGCGAAAACACTTaGAGCTGTGATGCCATACTG +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGGGENT*SCDAIL
Trigger: CAGTATGGCATCACAGCTGCAAGTGTTTTCGCCCCC...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAAAGGCTGTGGCCACCTaGTGCAAGATTGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGKAVAT*CKIGLM
Trigger: CATCAGACCAATCTTGCAGCAGGTGGCCACAGCCTT...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCACTCCCCATGGCCTCTaGAATCATTGCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLTPHGL*NHCCGL
Trigger: CAGCCCACAGCAATGATTCCAGAGGCCATGGGGAGT...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCAGGAGACCTGAGGCCTaGGTTGCTACAGTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLRRPEA*VATVQS
Trigger: TGACTGCACTGTAGCAACCCAGGCCTCAGGTCTCCT...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAGCCGCCGATGACTGCTaGTTCTGGCTAAGATTGAGT +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGAADDC*FWLRLS
Trigger: ACTCAATCTTAGCCAGAACCAGCAGTCATCGGCGGC...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCGATGAGCAATGGAGCTaGTTGAGCCCAGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSDEQWS*LSPVQQ
Trigger: CTGCTGCACTGGGCTCAACCAGCTCCATTGCTCATC...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCACACTGACAGGGACCTaGTGCACCAAAGTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSTLTGT*CTKVLG
Trigger: CCCTAGCACTTTGGTGCACCAGGTCCCTGTCAGTGT...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCCACGGGGGCTTGCTaGTCCATCCTAAGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPSTGAC*SILRQA
Trigger: AGCTTGCCTTAGGATGGACCAGCAAGCCCCCGTGGA...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCCGTAGGGAGCCAGCGTaGATCGAGTGCGGGGCCTGG +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSRREPA*IECGAW
Trigger: CCAGGCCCCGCACTCGATCCACGCTGGCTCCCTACG...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCTTGCCCTTGTGTGGCTaGGAGGGTTTTGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSLPLCG*EGFAVG
Trigger: ACCCACAGCAAAACCCTCCCAGCCACACAAGGGCAA...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCTGGCTTGCCCTTGTGTaGCTGGGAGGGTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSWLALV*LGGFCC
Trigger: ACAGCAAAACCCTCCCAGCCACACAAGGGCAAGCCA...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACCTGGTGAGAGGAGTTaGCTTGCCCTTGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSPGERS*LALVWL
Trigger: CAGCCACACAAGGGCAAGCCAACTCCTCTCACCAGG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAGCTTCATCAAGGCTGTaGCCACCTGCTGCAAGATTG +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGASSRL*PPAARL
Trigger: CAATCTTGCAGCAGGTGGCCACAGCCTTGATGAAGC...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGTACCGCCGGTGTGTCTaGTTCTCAGCCGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQYRRCV*FSAASW
Trigger: CCAGCTCGCGGCTGAGAACCAGACACACCGGCGGTA...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369555.6
ENST00000369558.5
CDS-3UTR TCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCGTGATGGTGGCTACTTaGGGGTGGAGAGTTGCTACC +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPVMVAT*GWRVAT
Trigger: GGTAGCAACTCTCCACCCTCAAGTAGCCACCATCAC...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000426820.7
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGTGATGGTGGCTACTTaGGGGTGGAGAGTTGCTACC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSVMVAT*GWRVAT
Trigger: GGTAGCAACTCTCCACCCTCAAGTAGCCACCATCAC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
CDS-3UTR TCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCCTGTACTGGTTGCCATaGGAGTGGGCATTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPLYWLP*EWAFLQ
Trigger: CTGGAGGAATGCCCACTCTCATGGCAACCAGTACAG...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACTGTACTGGTTGCCATaGGAGTGGGCATTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSLYWLP*EWAFLQ
Trigger: CTGGAGGAATGCCCACTCTCATGGCAACCAGTACAG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCAACATTCAGAGGCTaGGCAGTGGCCAATGTCACA +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLPTFRG*AVANVT
Trigger: TGTGACATTGGCCACTGCTCAGCCTCTGAATGTTGG...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATTGCTCAGGAGACCTaGGGCCTGGGTTGCTACAGT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLIAQET*GLGCYS
Trigger: ACTGTAGCAACCCAGGCCTCAGGTCTCCTGAGCAAT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCGATACCCTGTGGGGGTaGTACAGCATCCAGATGACT +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLDTLWG*YSIQMT
Trigger: AGTCATCTGGATGCTGTATCACCCCCACAGGGTATC...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCGGCTGGGCCCAACACTaGCAGGGACCTGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGGWAQH*QGPGAP
Trigger: TGGTGCACCAGGTCCCTGTCAGTGTTGGGCCCAGCC...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTGGCTGGGCCCAACACTaGCAGGGACCTGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLGWAQH*QGPGAP
Trigger: TGGTGCACCAGGTCCCTGTCAGTGTTGGGCCCAGCC...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCGGCTGGGCCCAACACTaGCAGGGACCTGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSGWAQH*QGPGAP
Trigger: TGGTGCACCAGGTCCCTGTCAGTGTTGGGCCCAGCC...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTGGCTGGGCCCAACACTaGCAGGGACCTGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPGWAQH*QGPGAP
Trigger: TGGTGCACCAGGTCCCTGTCAGTGTTGGGCCCAGCC...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTCCACGCTGGCAGAAGTaGGGAGGCTGGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPPRWQK*GGWAQH
Trigger: GTGTTGGGCCCAGCCTCCTCACTTCTGCCAGCGTGG...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCACCACGCTGGCAGAAGTaGGGAGGCTGGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPPRWQK*GGWAQH
Trigger: GTGTTGGGCCCAGCCTCCTCACTTCTGCCAGCGTGG...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGTAGCAACGCACAGTaGGAGAGCCACATGGGGAAA +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSGSNAQ*ESHMGK
Trigger: TTTCCCCATGTGGCTCTCTCACTGTGCGTTGCTACC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGCTGACCAGGCTCCATaGAATCTCCCATCTCCATCC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSADQAP*NLPSPS
Trigger: GGATGGAGATGGGAGATTTCATGGAGCCTGGTCAGC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCCAGAGTGGCTACACTaGACCCTTCTCCGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLPEWLH*TLLRFF
Trigger: GAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCCCAGAGTGGCTACACTaGACCCTTCTCCGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPPEWLH*TLLRFF
Trigger: GAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGG...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGCGGAAGTGCAGCTaGATGGACTCTCTAGGACGA +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLRRKCS*MDSLGR
Trigger: TCGTCCTAGAGAGTCCATTCAGCTGCACTTCCGCCT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCGCTGTGATGCCATACTaGGGCGGAAGTGCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPAVMPY*GGSAAE
Trigger: TTCAGCTGCACTTCCGCCTCAGTATGGCATCACAGC...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGGGCACTCGACGACACTaGTGGGGGCGAAAACACTTG +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLGTRRH*WGRKHL
Trigger: CAAGTGTTTTCGCCCCCATCAGTGTCGTCGAGTGCC...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCGCTGCTTTGGAAGGTTaGTGTAGCAGCACTGCCCGA +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPAALEG*CSSTAR
Trigger: TCGGGCAGTGCTGCTACATCAACCTTCCAAAGCAGC...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGCTGCTTTGGAAGGTTaGTGTAGCAGCACTGCCCGA +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSAALEG*CSSTAR
Trigger: TCGGGCAGTGCTGCTACATCAACCTTCCAAAGCAGC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAACACTTGCAGCTGTaGTGCCATACCGCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLKHLQL*CHTAGV
Trigger: CACACCGGCGGTATGGCATCACAGCTGCAAGTGTTT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
CDS-3UTR GCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCTGCAAGGAAACACCCTaGTGGGCAACTCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLCKETP*WATPGT
Trigger: AGTTCCTGGAGTTGCCCAGCAGGGTGTTTCCTTGCA...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACCGCCGGCCGGCCGGCTaGGCAGCTCAGAGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYRRPAG*AAQSKG
Trigger: CCCTTTACTCTGAGCTGCGCAGCCGGCCGGCCGGCG...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369558.5
ENST00000426820.7
CDS-3UTR GCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCGGCCTCTGGAATCATTaGTGTGGGCTGGACAGAGTT +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLGLWNH*CGLDRV
Trigger: AACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCC...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGCTCCAGTCAGCTAGCTaGTGTCCACTCCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQLQSAS*CPLPMA
Trigger: GGCCATGGGGAGTGGACAGCAGCTAGCTGACTGGAG...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAGTCAGCAAGGATGGCTaGTGCATGATAGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGVSKDG*CMIVLY
Trigger: GTACAGCACTATCATGCAGCAGCCATCCTTGCTGAC...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTGGTGCGGAGGGGACTaGTCCCAACCAGAGAATAGA +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPWCGGD*SQPENR
Trigger: TCTATTCTCTGGTTGGGAGCAGTCCCCTCCGCACCA...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTGGTGCGGAGGGGACTaGTCCCAACCAGAGAATAGA +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLWCGGD*SQPENR
Trigger: TCTATTCTCTGGTTGGGAGCAGTCCCCTCCGCACCA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGGTGCGGAGGGGACTaGTCCCAACCAGAGAATAGA +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSWCGGD*SQPENR
Trigger: TCTATTCTCTGGTTGGGAGCAGTCCCCTCCGCACCA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCAAACGGATCCACTATTaGCTCGGAGAGCACTCAGGG +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLKRIHY*LGEHSG
Trigger: CCCTGAGTGCTCTCCGAGGCAATAGTGGATCCGTTT...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGCATCTGCCACAACTCTaGCAGGCCCCTCCAAAACGG +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLHLPQL*QAPPKR
Trigger: CCGTTTTGGAGGGGCCTGGCAGAGTTGTGGCAGATG...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGACCTGGGTTGCTACAGTaGAGTCACCAAGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGPGLLQ*SHQAEF
Trigger: AAACTCAGCTTGGTGACTGCACTGTAGCAACCCAGG...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCAGCATCCAGATGACTaGCCACTCACTGAAGCGACT +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSQHPDD*PLTEAT
Trigger: AGTCGCTTCAGTGAGTGGGCAGTCATCTGGATGCTG...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGGAGCCGCCGATGACTaGTGGTTCTGGCTAAGATTG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLGAADD*WFWLRL
Trigger: CAATCTTAGCCAGAACCAGCAGTCATCGGCGGCTCC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCGGGGCAAGGTGTGGGTaGCCTGTCGAGTGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSGARCG*PVECSG
Trigger: CCCGCTACACTCGACAGGGCACCCACACCTTGCCCC...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAGGGGCAAGGTGTGGGTaGCCTGTCGAGTGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPGARCG*PVECSG
Trigger: CCCGCTACACTCGACAGGGCACCCACACCTTGCCCC...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGCTTCAGTGGGCCCCTaGAGAACAAGTTGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLASVGP*RTSCWL
Trigger: TAGCCAGCAACTTGTTCTGCAGGGGCCCACTGAAGC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCGCTTCAGTGGGCCCCTaGAGAACAAGTTGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPASVGP*RTSCWL
Trigger: TAGCCAGCAACTTGTTCTGCAGGGGCCCACTGAAGC...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCAGAGAAAAACCTTCTaGTTCAGTGGGCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSQRKTF*FSGPLQ
Trigger: CTGCAGGGGCCCACTGAAGCAGAAGGTTTTTCTCTG...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCTCTCCTTGCAGGCAATaGCCCTGCTCATTCAGCACT +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSSPCRQ*PCSFST
Trigger: AGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGA...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGGGGTCCACGGGGGCTTaGTGGTCCATCCTAAGGCAA +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMGSTGA*WSILRQ
Trigger: TTGCCTTAGGATGGACCAGCAAGCCCCCGTGGACCC...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGGGTCCACGGGGGCTTaGTGGTCCATCCTAAGGCAA +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQGSTGA*WSILRQ
Trigger: TTGCCTTAGGATGGACCAGCAAGCCCCCGTGGACCC...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCGCTGTACGGACTACCTaGCCCATCTTGGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPAVRTT*PILEAL
Trigger: AAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGC...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAGCTGTTACAACAATATaGTCCACTGCAGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGAVTTI*STAGAG
Trigger: CCCAGCTCCTGCAGTGGAGCATATTGTTGTAACAGC...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGGGGGCGAAAACACTTaGAGCTGTGATGCCATACCG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLGGENT*SCDAIP
Trigger: CGGTATGGCATCACAGCTGCAAGTGTTTTCGCCCCC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
CDS-3UTR CCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAGAGTGCAAATCTGGGTaGTTCCAGGCTGCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGECKSG*FQAARK
Trigger: TTTCCTTGCAGCCTGGAACCACCCAGATTTGCACTC...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCACTCCCCATGGCCTCTaGAATCATTGCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPTPHGL*NHCCGL
Trigger: CAGCCCACAGCAATGATTCCAGAGGCCATGGGGAGT...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACTCCCCATGGCCTCTaGAATCATTGCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLTPHGL*NHCCGL
Trigger: CAGCCCACAGCAATGATTCCAGAGGCCATGGGGAGT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGCTGTCCACTCCCCATaGCCTCTGGAATCATTGCTG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLAVHSP*PLESLL
Trigger: CAGCAATGATTCCAGAGGCCATGGGGAGTGGACAGC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAAGGGCTGGGAGTATCTaGAATGATGATGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGRAGSI*NDDGLM
Trigger: CATCAGCCCATCATCATTCCAGATACTCCCAGCCCT...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGAGACCTGAGGCCTaGGTTGCTACAGTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLRRPEA*VATVQS
Trigger: TGACTGCACTGTAGCAACCCAGGCCTCAGGTCTCCT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCTGGCTAAGATTGAGTaGTTGTGCTGCACTGGTCCC +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSLAKIE*LCCTGP
Trigger: GGGACCAGTGCAGCACAACCACTCAATCTTAGCCAG...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCCAGATGAGCCTGGCTTaGCAGGTGAGCAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSQMSLA*QVSRGR
Trigger: CCGGCCCCTGCTCACCTGCCAAGCCAGGCTCATCTG...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCACAGATGAGCCTGGCTTaGCAGGTGAGCAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPQMSLA*QVSRGR
Trigger: CCGGCCCCTGCTCACCTGCCAAGCCAGGCTCATCTG...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTCAGATGAGCCTGGCTTaGCAGGTGAGCAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLQMSLA*QVSRGR
Trigger: CCGGCCCCTGCTCACCTGCCAAGCCAGGCTCATCTG...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGATGAGCAATGGAGCTaGTTGAGCCCAGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSDEQWS*LSPVQQ
Trigger: CTGCTGCACTGGGCTCAACCAGCTCCATTGCTCATC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAACACTGACAGGGACCTaGTGCACCAAAGTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSTLTGT*CTKVLG
Trigger: CCCTAGCACTTTGGTGCACCAGGTCCCTGTCAGTGT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAAACCTTCTGCTTCAGTaGGCCCCTGCAGAACAAGTT +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGNLLLQ*APAEQV
Trigger: AACTTGTTCTGCAGGGGCCCACTGAAGCAGAAGGTT...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTTGGGCCTCGAGTAGGTaGGCCTCCGTAGGGAGCCAG +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTWASSR*ASVGSQ
Trigger: CTGGCTCCCTACGGAGGCCCACCTACTCGAGGCCCA...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTTGCCCTTGTGTGGCTaGGAGGGTTTTGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLLPLCG*EGFAVG
Trigger: ACCCACAGCAAAACCCTCCCAGCCACACAAGGGCAA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGGCTTGCCCTTGTGTaGCTGGGAGGGTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSWLALV*LGGFCC
Trigger: ACAGCAAAACCCTCCCAGCCACACAAGGGCAAGCCA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCACTCCACTGCAGGAGCTaGGAGGAGGAGGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWALHCRS*EEEALV
Trigger: GACCAGGGCCTCCTCCTCCCAGCTCCTGCAGTGGAG...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAGGCTTAAGGTCAGCGTaGATCAGACCAAGACTCTTG +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGGLRSA*IRPRLL
Trigger: CAAGAGTCTTGGTCTGATCCACGCTGACCTTAAGCC...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCTACAGCTTCCCTGCGTaGGAACTCCTGACTGAATCT +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLYSFPA*ELLTES
Trigger: AGATTCAGTCAGGAGTTCTCACGCAGGGAAGCTGTA...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
CDS-3UTR TCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCTACAGCTTCCCTGCGTaGGAACTCCTGACTGAATCT +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSYSFPA*ELLTES
Trigger: AGATTCAGTCAGGAGTTCTCACGCAGGGAAGCTGTA...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
CDS-3UTR TCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGCCGCATACTGCGGTGTaGTGGTGGCTACTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQPHTAV*WWLLEG
Trigger: ACCCTCAAGTAGCCACCATCACACCGCAGTATGCGG...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000426820.7
CDS-3UTR TCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAGGCAGGAGAATTTGCTaGGTCCCTCCAGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPGRRIC*VPPGHA
Trigger: GGCGTGGCCTGGAGGGACTCAGCAAATTCTCCTGCC...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCGGCAGGAGAATTTGCTaGGTCCCTCCAGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGGRRIC*VPPGHA
Trigger: GGCGTGGCCTGGAGGGACTCAGCAAATTCTCCTGCC...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGCTGTACTGGTTGCCATaGGAGTGGGCATTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLLYWLP*EWAFLQ
Trigger: CTGGAGGAATGCCCACTCTCATGGCAACCAGTACAG...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCCCAACATTCAGAGGCTaGGCAGTGGCCAATGTCACA +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPPTFRG*AVANVT
Trigger: TGTGACATTGGCCACTGCTCAGCCTCTGAATGTTGG...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACCAACATTCAGAGGCTaGGCAGTGGCCAATGTCACA +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSPTFRG*AVANVT
Trigger: TGTGACATTGGCCACTGCTCAGCCTCTGAATGTTGG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCCAACATTCAGAGGCTaGGCAGTGGCCAATGTCACA +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLPTFRG*AVANVT
Trigger: TGTGACATTGGCCACTGCTCAGCCTCTGAATGTTGG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGATACCCTGTGGGGGTaGTACAGCATCCAGATGACT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSDTLWG*YSIQMT
Trigger: AGTCATCTGGATGCTGTATCACCCCCACAGGGTATC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCTGTGGGGAGAAAAGATaGGCAATGGAGCTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSCGEKR*AMELVE
Trigger: CTCAACCAGCTCCATTGCTCATCTTTTCTCCCCACA...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCCACGCTGGCAGAAGTaGGGAGGCTGGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFPRWQK*GGWAQH
Trigger: GTGTTGGGCCCAGCCTCCTCACTTCTGCCAGCGTGG...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCAATGCAGTCAACACTaGGACAGGTTCCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLQCSQH*DRFPQR
Trigger: TCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAGACAATTTCACAGCTTaGAGGGCCCCAAGACTATAC +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGDNFTA*RAPRLY
Trigger: GTATAGTCTTGGGGCCCTTCAAGCTGTGAAATTGTC...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAGATCCATGCAGGAGCTaGGAGTACAAGGACAATTTC +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGDPCRS*EYKDNF
Trigger: GAAATTGTCCTTGTACTCTCAGCTCCTGCATGGATC...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCCAGTACCTTCTACTTaGCCCAGATCCATGCAGGAG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLPVPST*PRSMQE
Trigger: CTCCTGCATGGATCTGGGTCAAGTAGAAGGTACTGG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGGTACAGAGCTGGCTaGCCAGGCTCCATGAAATCT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSWYRAG*PGSMKS
Trigger: AGATTTCATGGAGCCTGGTCAGCCAGCTCTGTACCA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCGAGGTCAGGTCACTGTaGCCCAGGCCAGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGEVRSL*PRPAAH
Trigger: GTGAGCAGCTGGCCTGGGTCACAGTGACCTGACCTC...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGCCTTAAGCTGGTTTaGGGTCAGGTCACTGTGACC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLSLKLV*GQVTVT
Trigger: GGTCACAGTGACCTGACCTCAAACCAGCTTAAGGCT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCGGCCACTCCTGTCACTaGGAGGCAATTTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSGHSCH*EAISFP
Trigger: AGGAAATGAAATTGCCTCTCAGTGACAGGAGTGGCC...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGGGCACTCGACGACACTaGTGGGGGCGAAAACACTTG +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMGTRRH*WGRKHL
Trigger: CAAGTGTTTTCGCCCCCATCAGTGTCGTCGAGTGCC...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGGCACTCGACGACACTaGTGGGGGCGAAAACACTTG +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKGTRRH*WGRKHL
Trigger: CAAGTGTTTTCGCCCCCATCAGTGTCGTCGAGTGCC...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCGAAACGTTGCTTCTGTaGGTCAGGGTCTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPETLLL*VRVWLL
Trigger: AAGCAGCCAGACCCTGACTCACAGAAGCAACGTTTC...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGAAACGTTGCTTCTGTaGGTCAGGGTCTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSETLLL*VRVWLL
Trigger: AAGCAGCCAGACCCTGACTCACAGAAGCAACGTTTC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCAGAACCAAAGTCAATaGCCTTCACTCGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLQNQSQ*PSLGRA
Trigger: AGCCCTACCGAGTGAAGGTCATTGACTTTGGTTCTG...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGCCACGCCTGCTGCGTaGGAACTCCTGACTGAATCT +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQATPAA*ELLTES
Trigger: AGATTCAGTCAGGAGTTCTCACGCAGCAGGCGTGGC...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369555.6
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCGGTCTGCCTTCTCTaGCAACATGTCTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPSVCLL*QHVCSL
Trigger: GAGGGAACAGACATGTTGGCAGAGAAGGCAGACCGA...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATCGGTCTGCCTTCTCTaGCAACATGTCTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSSVCLL*QHVCSL
Trigger: GAGGGAACAGACATGTTGGCAGAGAAGGCAGACCGA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGCAAGGAAACACCCTaGTGGGCAACTCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSCKETP*WATPGT
Trigger: AGTTCCTGGAGTTGCCCAGCAGGGTGTTTCCTTGCA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTGCAAGGAAACACCCTaGTGGGCAACTCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLCKETP*WATPGT
Trigger: AGTTCCTGGAGTTGCCCAGCAGGGTGTTTCCTTGCA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTCCTCCAGGCCACGCCTaGAGTACAGCGGCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPPPGHA*STAAVC
Trigger: ACAGACTGCCGCTGTACTGCAGGCGTGGCCTGGAGG...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCGGCCTCTGGAATCATTaGTGTGGGCTGGACAGAGTT +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPGLWNH*CGLDRV
Trigger: AACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCC...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGCCTCTGGAATCATTaGTGTGGGCTGGACAGAGTT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSGLWNH*CGLDRV
Trigger: AACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCAGCAAGGATGGCTGCTaGATGATAGTGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLSKDGC*MIVLYW
Trigger: CCAGTACAGCACTATCATGCAGCAGCCATCCTTGCT...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCGTCAGCAAGGATGGCTaGTGCATGATAGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLVSKDG*CMIVLY
Trigger: GTACAGCACTATCATGCAGCAGCCATCCTTGCTGAC...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGTGGTGCGGAGGGGACTaGTCCCAACCAGAGAATAGA +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLWCGGD*SQPENR
Trigger: TCTATTCTCTGGTTGGGAGCAGTCCCCTCCGCACCA...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAACGGATCCACTATTaGCTCGGAGAGCACTCAGGG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLKRIHY*LGEHSG
Trigger: CCCTGAGTGCTCTCCGAGGCAATAGTGGATCCGTTT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCAAACGGATCCACTATTaGCTCGGAGAGCACTCAGGG +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPKRIHY*LGEHSG
Trigger: CCCTGAGTGCTCTCCGAGGCAATAGTGGATCCGTTT...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAAACGGATCCACTATTaGCTCGGAGAGCACTCAGGG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSKRIHY*LGEHSG
Trigger: CCCTGAGTGCTCTCCGAGGCAATAGTGGATCCGTTT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTCATCTGCCACAACTCTaGCAGGCCCCTCCAAAACGG +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSHLPQL*QAPPKR
Trigger: CCGTTTTGGAGGGGCCTGGCAGAGTTGTGGCAGATG...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCAGCATCCAGATGACTaGCCACTCACTGAAGCGACT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLQHPDD*PLTEAT
Trigger: AGTCGCTTCAGTGAGTGGGCAGTCATCTGGATGCTG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGTCGAGTGTAGCGGGCTaGCATGCTGGAAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKSSVAG*HAGRCR
Trigger: CCTACACCTTCCAGCATGGCAGCCCGCTACACTCGA...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCGGGGCAAGGTGTGGGTaGCCTGTCGAGTGTAGCGGG +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFGARCG*PVECSG
Trigger: CCCGCTACACTCGACAGGGCACCCACACCTTGCCCC...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAGCTTCAGTGGGCCCCTaGAGAACAAGTTGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIASVGP*RTSCWL
Trigger: TAGCCAGCAACTTGTTCTGCAGGGGCCCACTGAAGC...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCCAGAGAAAAACCTTCTaGTTCAGTGGGCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPQRKTF*FSGPLQ
Trigger: CTGCAGGGGCCCACTGAAGCAGAAGGTTTTTCTCTG...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCGCCACATGGGGAAAATaGTTCTGTGAGAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLATWGK*FCENSA
Trigger: GGCTGAGTTCTCACAGAAGCATTTTCCCCATGTGGC...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCCTCCCATCTCCATCCTaGACCTCCTTGACACCATCT +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPLPSPS*TSLTPS
Trigger: AGATGGTGTCAAGGAGGTGCAGGATGGAGATGGGAG...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAACACATTACTGTGCTTaGCTGGCTAAGGGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGTHYCA*LAKGSQ
Trigger: TTGACTGCCCTTAGCCAGGCAAGCACAGTAATGTGT...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGGGGGCGAAAACACTTaGAGCTGTGATGCCATACTG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLGGENT*SCDAIL
Trigger: CAGTATGGCATCACAGCTGCAAGTGTTTTCGCCCCC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAAGGCTGTGGCCACCTaGTGCAAGATTGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSKAVAT*CKIGLM
Trigger: CATCAGACCAATCTTGCAGCAGGTGGCCACAGCCTT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAATCATTGCTGTGGGCTaGACAGAGTTGTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGIIAVG*TELCRA
Trigger: AGCTCTACACAACTCTGTCCAGCCCACAGCAATGAT...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAAATTATAAGAAGATGTaGTGCGGAGGGGACTGCTCC +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGNYKKM*CGGDCS
Trigger: GGAGCAGTCCCCTCCGCACCACATCTTCTTATAATT...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCAGGGCTGGGAGTATCTaGAATGATGATGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSRAGSI*NDDGLM
Trigger: CATCAGCCCATCATCATTCCAGATACTCCCAGCCCT...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGAGGAGACCTGAGGCCTaGGTTGCTACAGTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLRRPEA*VATVQS
Trigger: TGACTGCACTGTAGCAACCCAGGCCTCAGGTCTCCT...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACTGGCTAAGATTGAGTaGTTGTGCTGCACTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSLAKIE*LCCTGP
Trigger: GGGACCAGTGCAGCACAACCACTCAATCTTAGCCAG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGCCGCCGATGACTGCTaGTTCTGGCTAAGATTGAGT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLAADDC*FWLRLS
Trigger: ACTCAATCTTAGCCAGAACCAGCAGTCATCGGCGGC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGTCCACGGGGGCTTGCTaGTCCATCCTAAGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMSTGAC*SILRQA
Trigger: AGCTTGCCTTAGGATGGACCAGCAAGCCCCCGTGGA...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGTCCACGGGGGCTTGCTaGTCCATCCTAAGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKSTGAC*SILRQA
Trigger: AGCTTGCCTTAGGATGGACCAGCAAGCCCCCGTGGA...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCTACCTGCCCCATCTTaGAAGCCCTTACTCCTTACA +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLLPAPS*KPLLLT
Trigger: TGTAAGGAGTAAGGGCTTCCAAGATGGGGCAGGTAG...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGTTGCCCTTGTGTGGCTaGGAGGGTTTTGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLLPLCG*EGFAVG
Trigger: ACCCACAGCAAAACCCTCCCAGCCACACAAGGGCAA...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGCCTGGTGAGAGGAGTTaGCTTGCCCTTGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKPGERS*LALVWL
Trigger: CAGCCACACAAGGGCAAGCCAACTCCTCTCACCAGG...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATCTTTGTGGTCACAGTaGTGGTTGTGGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSSLWSQ*WLWQQH
Trigger: GTGCTGCTGCCACAACCACCACTGTGACCACAAAGA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCAATCCCCTTCTCCGCTaGAACTGCTACTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLNPLLR*NCYSLW
Trigger: CCACAAAGAGTAGCAGTTCCAGCGGAGAAGGGGATT...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCAATCCCCTTCTCCGCTaGAACTGCTACTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSNPLLR*NCYSLW
Trigger: CCACAAAGAGTAGCAGTTCCAGCGGAGAAGGGGATT...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCAATCTGTCCTTGTCTaGCATAGGAGGGGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLQSVLV*HRRGGS
Trigger: AGAACCACCCCTCCTATGCCAGACAAGGACAGATTG...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGCTTCATCAAGGCTGTaGCCACCTGCTGCAAGATTG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSASSRL*PPAARL
Trigger: CAATCTTGCAGCAGGTGGCCACAGCCTTGATGAAGC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCGTAGGGCTGGCGAACTaGATCAACCAGCATGATGTT +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLVGLAN*INQHDV
Trigger: AACATCATGCTGGTTGATCCAGTTCGCCAGCCCTAC...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTTACCGCCGGTGTGTCTaGTTCTCAGCCGCGAGCTGG +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPYRRCV*FSAASW
Trigger: CCAGCTCGCGGCTGAGAACCAGACACACCGGCGGTA...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000369558.5
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATACAGCTTCCCTGCGTaGGAACTCCTGACTGAATCT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSYSFPA*ELLTES
Trigger: AGATTCAGTCAGGAGTTCTCACGCAGGGAAGCTGTA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTACAGCTTCCCTGCGTaGGAACTCCTGACTGAATCT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLYSFPA*ELLTES
Trigger: AGATTCAGTCAGGAGTTCTCACGCAGGGAAGCTGTA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
CDS-3UTR TCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCAACTGTTGCCAAGTTaGAGGCAGGAGAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSQLLPS*RQENLL
Trigger: CAGCAAATTCTCCTGCCTTCAACTTGGCAACAGTTG...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGATTGCTCAGGAGACCTaGGGCCTGGGTTGCTACAGT +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMIAQET*GLGCYS
Trigger: ACTGTAGCAACCCAGGCCTCAGGTCTCCTGAGCAAT...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGATTGCTCAGGAGACCTaGGGCCTGGGTTGCTACAGT +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKIAQET*GLGCYS
Trigger: ACTGTAGCAACCCAGGCCTCAGGTCTCCTGAGCAAT...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTGGTTGGAGCCGCCGATaGCTGCTGGTTCTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPGWSRR*LLVLAK
Trigger: CTTAGCCAGAACCAGCAGTCATCGGCGGCTCCAACC...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGTGGGGAGAAAAGATaGGCAATGGAGCTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSCGEKR*AMELVE
Trigger: CTCAACCAGCTCCATTGCTCATCTTTTCTCCCCACA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTGTGGGGAGAAAAGATaGGCAATGGAGCTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLCGEKR*AMELVE
Trigger: CTCAACCAGCTCCATTGCTCATCTTTTCTCCCCACA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACGGCTGGGCCCAACACTaGCAGGGACCTGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYGWAQH*QGPGAP
Trigger: TGGTGCACCAGGTCCCTGTCAGTGTTGGGCCCAGCC...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTAACTGGTGTTGGTACTaGGCAGGGGCCACGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPNWCWY*AGATLA
Trigger: TGCCAGCGTGGCCCCTGCTCAGTACCAACACCAGTT...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTAACTGGTGTTGGTACTaGGCAGGGGCCACGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLNWCWY*AGATLA
Trigger: TGCCAGCGTGGCCCCTGCTCAGTACCAACACCAGTT...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGTGGTACAGAGCTGGCTaGCCAGGCTCCATGAAATCT +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLWYRAG*PGSMKS
Trigger: AGATTTCATGGAGCCTGGTCAGCCAGCTCTGTACCA...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGCCAGAGTGGCTACACTaGACCCTTCTCCGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQPEWLH*TLLRFF
Trigger: GAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGG...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGTGGAGGACAATGGATaGGCAATCACAAAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLVEDNG*AITKAG
Trigger: GCCTGCTTTTGTGATTGCTCATCCATTGTCCTCCAC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGGCCACTCCTGTCACTaGGAGGCAATTTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLGHSCH*EAISFP
Trigger: AGGAAATGAAATTGCCTCTCAGTGACAGGAGTGGCC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAACACTTGCAGCTGTaGTGCCATACTGAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLKHLQL*CHTEAE
Trigger: TTCCGCCTCAGTATGGCATCACAGCTGCAAGTGTTT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCGTAAGCAGGGATGTTaGAATTTGCTACCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLRKQGC*NLLPGE
Trigger: CTCACCAGGTAGCAAATTTCAACATCCCTGCTTACG...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAGAAACGTTGCTTCTGTaGGTCAGGGTCTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIETLLL*VRVWLL
Trigger: AAGCAGCCAGACCCTGACTCACAGAAGCAACGTTTC...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGGGGATGTTCTTCTATaGTCTGCACACTACCGTTGC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLGDVLL*SAHYRC
Trigger: GCAACGGTAGTGTGCAGATCATAGAAGAACATCCCC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGGGATGTTCTTCTATaGTCTGCACACTACCGTTGC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSGDVLL*SAHYRC
Trigger: GCAACGGTAGTGTGCAGATCATAGAAGAACATCCCC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTCAGACCAAGACTCTTaGGCTTCATCAAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLSDQDS*ASSRLW
Trigger: CCACAGCCTTGATGAAGCTCAAGAGTCTTGGTCTGA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCAGAACCAAAGTCAATaGCCTTCACTCGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLQNQSQ*PSLGRA
Trigger: AGCCCTACCGAGTGAAGGTCATTGACTTTGGTTCTG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGCTGTATCATACATGTaGACCCTCCGCTTGCAGATC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLAVSYM*TLRLQI
Trigger: GATCTGCAAGCGGAGGGTTCACATGTATGATACAGC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369561.8
CDS-3UTR GCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTCTCCAGTCAGCTAGCTaGTGTCCACTCCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPLQSAS*CPLPMA
Trigger: GGCCATGGGGAGTGGACAGCAGCTAGCTGACTGGAG...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCACTCCAGTCAGCTAGCTaGTGTCCACTCCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPLQSAS*CPLPMA
Trigger: GGCCATGGGGAGTGGACAGCAGCTAGCTGACTGGAG...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCCTCCAGTCAGCTAGCTaGTGTCCACTCCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSLQSAS*CPLPMA
Trigger: GGCCATGGGGAGTGGACAGCAGCTAGCTGACTGGAG...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGCAAGGATGGCTGCTaGATGATAGTGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLSKDGC*MIVLYW
Trigger: CCAGTACAGCACTATCATGCAGCAGCCATCCTTGCT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGTCAGCAAGGATGGCTaGTGCATGATAGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSVSKDG*CMIVLY
Trigger: GTACAGCACTATCATGCAGCAGCCATCCTTGCTGAC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGTCAGCAAGGATGGCTaGTGCATGATAGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLVSKDG*CMIVLY
Trigger: GTACAGCACTATCATGCAGCAGCCATCCTTGCTGAC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGTGGTGCGGAGGGGACTaGTCCCAACCAGAGAATAGA +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMWCGGD*SQPENR
Trigger: TCTATTCTCTGGTTGGGAGCAGTCCCCTCCGCACCA...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATATAAGAAGATGTGGTaGGGAGGGGACTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSYKKMW*GGDCSQ
Trigger: TTGGGAGCAGTCCCCTCCGCACCACATCTTCTTATA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTATAAGAAGATGTGGTaGGGAGGGGACTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLYKKMW*GGDCSQ
Trigger: TTGGGAGCAGTCCCCTCCGCACCACATCTTCTTATA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACCTGGGTTGCTACAGTaGAGTCACCAAGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSPGLLQ*SHQAEF
Trigger: AAACTCAGCTTGGTGACTGCACTGTAGCAACCCAGG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCCTGGGTTGCTACAGTaGAGTCACCAAGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLPGLLQ*SHQAEF
Trigger: AAACTCAGCTTGGTGACTGCACTGTAGCAACCCAGG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGGGAGCCGCCGATGACTaGTGGTTCTGGCTAAGATTG +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMGAADD*WFWLRL
Trigger: CAATCTTAGCCAGAACCAGCAGTCATCGGCGGCTCC...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGGAGCCGCCGATGACTaGTGGTTCTGGCTAAGATTG +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQGAADD*WFWLRL
Trigger: CAATCTTAGCCAGAACCAGCAGTCATCGGCGGCTCC...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTGCAGGCAATGCCCCTaGTCATTCAGCACTACAGTA +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPCRQCP*SFSTTV
Trigger: TACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCA...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATCTCCTTGCAGGCAATaGCCCTGCTCATTCAGCACT +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVISPCRQ*PCSFST
Trigger: AGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGA...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGCCACATGGGGAAAATaGTTCTGTGAGAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLATWGK*FCENSA
Trigger: GGCTGAGTTCTCACAGAAGCATTTTCCCCATGTGGC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGATTGACTCCTCTCACCTaGTTCCTGAATTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGLTPLT*FLNSHR
Trigger: TCTGTGAGAATTCAGGAAGCAGGTGAGAGGAGTCAA...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCGGAATGTCAACTATGTaGAGGAAGGACTGCCACATG +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSGMSTM*RKDCHM
Trigger: CATGTGGCAGTCCTTCCTGCACATAGTTGACATTCC...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATACTCCCATCTCCATCCTaGACCTCCTTGACACCATCT +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVILPSPS*TSLTPS
Trigger: AGATGGTGTCAAGGAGGTGCAGGATGGAGATGGGAG...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGGCTGTACGGACTACCTaGCCCATCTTGGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMAVRTT*PILEAL
Trigger: AAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGC...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTGTGACCCAGGCCAGCTaGTCACTAAATTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSVTQAS*SLNSPG
Trigger: GCCTGGTGAATTTAGTGAGCAGCTGGCCTGGGTCAC...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGCTGTTACAACAATATaGTCCACTGCAGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLAVTTI*STAGAG
Trigger: CCCAGCTCCTGCAGTGGAGCATATTGTTGTAACAGC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGCTGTTACAACAATATaGTCCACTGCAGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSAVTTI*STAGAG
Trigger: CCCAGCTCCTGCAGTGGAGCATATTGTTGTAACAGC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACCACAGTCCTGTTTTaGAGCATGAGAGGGGGATGT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLTTVLF*SMRGGC
Trigger: ACATCCCCCTCTCATGCTGCAAAACAGGACTGTGGT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAACCACAGTCCTGTTTTaGAGCATGAGAGGGGGATGT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSTTVLF*SMRGGC
Trigger: ACATCCCCCTCTCATGCTGCAAAACAGGACTGTGGT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCACCGCCCCCTCCGCACTaGAGACTCTGCGGTGATTTA +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPPPPPH*RLCGDL
Trigger: TAAATCACCGCAGAGTCTGCAGTGCGGAGGGGGCGG...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426820.7
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGAGTGCAAATCTGGGTaGTTCCAGGCTGCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSECKSG*FQAARK
Trigger: TTTCCTTGCAGCCTGGAACCACCCAGATTTGCACTC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCTGGAATCATTGCTGTaGGCTGGACAGAGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLLESLL*AGQSCV
Trigger: TACACAACTCTGTCCAGCCCACAGCAATGATTCCAG...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGACTCCCCATGGCCTCTaGAATCATTGCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMTPHGL*NHCCGL
Trigger: CAGCCCACAGCAATGATTCCAGAGGCCATGGGGAGT...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGCTGTCCACTCCCCATaGCCTCTGGAATCATTGCTG +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQAVHSP*PLESLL
Trigger: CAGCAATGATTCCAGAGGCCATGGGGAGTGGACAGC...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGTGGCCAATGTCACATaGTTAGTCAGCAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLVANVT*LVSKDG
Trigger: GCCATCCTTGCTGACTAACCATGTGACATTGGCCAC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGGCTGGGAGTATCTaGAATGATGATGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLRAGSI*NDDGLM
Trigger: CATCAGCCCATCATCATTCCAGATACTCCCAGCCCT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAGGGCTGGGAGTATCTaGAATGATGATGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSRAGSI*NDDGLM
Trigger: CATCAGCCCATCATCATTCCAGATACTCCCAGCCCT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGAGGAGACCTGAGGCCTaGGTTGCTACAGTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQRRPEA*VATVQS
Trigger: TGACTGCACTGTAGCAACCCAGGCCTCAGGTCTCCT...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGGCCGCCGATGACTGCTaGTTCTGGCTAAGATTGAGT +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLAADDC*FWLRLS
Trigger: ACTCAATCTTAGCCAGAACCAGCAGTCATCGGCGGC...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAGCCGCCGATGACTGCTaGTTCTGGCTAAGATTGAGT +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIAADDC*FWLRLS
Trigger: ACTCAATCTTAGCCAGAACCAGCAGTCATCGGCGGC...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGACACTGACAGGGACCTaGTGCACCAAAGTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKTLTGT*CTKVLG
Trigger: CCCTAGCACTTTGGTGCACCAGGTCCCTGTCAGTGT...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAACCTTCTGCTTCAGTaGGCCCCTGCAGAACAAGTT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSNLLLQ*APAEQV
Trigger: AACTTGTTCTGCAGGGGCCCACTGAAGCAGAAGGTT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACTACCTGCCCCATCTTaGAAGCCCTTACTCCTTACA +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSLPAPS*KPLLLT
Trigger: TGTAAGGAGTAAGGGCTTCCAAGATGGGGCAGGTAG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGTGGTATCTGCTTATTaGACTGGGGTGCAGGAATGG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSVVSAY*TGVQEW
Trigger: CCATTCCTGCACCCCAGTCCAATAAGCAGATACCAC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGTTGCCCTTGTGTGGCTaGGAGGGTTTTGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKLPLCG*EGFAVG
Trigger: ACCCACAGCAAAACCCTCCCAGCCACACAAGGGCAA...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGGTCTGGCTGCTTTaGAAGGTTGATGTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLRVWLL*KVDVAA
Trigger: TGCTGCTACATCAACCTTCCAAAGCAGCCAGACCCT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCAACTGCTACTCTTTGTaGTCACAGTGGTGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSNCYSL*SQWWLW
Trigger: CCACAACCACCACTGTGACCACAAAGAGTAGCAGTT...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAATCCCCTTCTCCGCTaGAACTGCTACTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSNPLLR*NCYSLW
Trigger: CCACAAAGAGTAGCAGTTCCAGCGGAGAAGGGGATT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCAATCTGTCCTTGTCTaGCATAGGAGGGGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLQSVLV*HRRGGS
Trigger: AGAACCACCCCTCCTATGCCAGACAAGGACAGATTG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGGCTTAAGGTCAGCGTaGATCAGACCAAGACTCTTG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLGLRSA*IRPRLL
Trigger: CAAGAGTCTTGGTCTGATCCACGCTGACCTTAAGCC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGTAGGGCTGGCGAACTaGATCAACCAGCATGATGTT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLVGLAN*INQHDV
Trigger: AACATCATGCTGGTTGATCCAGTTCGCCAGCCCTAC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCTATCACACAGCCCAGTaGCCACATATCAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLYHTAQ*PHINSF
Trigger: GAAGCTATTGATATGTGGTCACTGGGCTGTGTGATA...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCACTGTATCATACATGTaGACCCTCCGCTTGCAGATC +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPTVSYM*TLRLQI
Trigger: GATCTGCAAGCGGAGGGTTCACATGTATGATACAGT...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAAAGGGACTCTTGATCTaGCTCACTGTATCATACATG +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGKGLLI*LTVSYM
Trigger: CATGTATGATACAGTGAGTCAGATCAAGAGTCCCTT...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGGAATGGATCTGTCTaGGTGCAAATCTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSWNGSV*VQIWVV
Trigger: AACCACCCAGATTTGCACTCAGACAGATCCATTCCA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCCGCATACTGCGGTGTaGTGGTGGCTACTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGPHTAV*WWLLEG
Trigger: ACCCTCAAGTAGCCACCATCACACCGCAGTATGCGG...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000426820.7
CDS-3UTR TCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCACCGCATACTGCGGTGTaGTGGTGGCTACTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAPHTAV*WWLLEG
Trigger: ACCCTCAAGTAGCCACCATCACACCGCAGTATGCGG...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000426820.7
CDS-3UTR TCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACGGCAGGAGAATTTGCTaGGTCCCTCCAGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYGRRIC*VPPGHA
Trigger: GGCGTGGCCTGGAGGGACTCAGCAAATTCTCCTGCC...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACAACTGTTGCCAAGTTaGAGGCAGGAGAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSQLLPS*RQENLL
Trigger: CAGCAAATTCTCCTGCCTTCAACTTGGCAACAGTTG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCAACTGTTGCCAAGTTaGAGGCAGGAGAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLQLLPS*RQENLL
Trigger: CAGCAAATTCTCCTGCCTTCAACTTGGCAACAGTTG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTCCAACATTCAGAGGCTaGGCAGTGGCCAATGTCACA +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSPTFRG*AVANVT
Trigger: TGTGACATTGGCCACTGCTCAGCCTCTGAATGTTGG...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCTGGATTGTTGTTGTCTaGCAACATGGGCAACACCAA +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSWIVVV*QHGQHQ
Trigger: TTGGTGTTGCCCATGTTGTCAGACAACAACAATCCA...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGAAGAGACTGGAGCTaGCTGCTTATTCTTCTTCGA +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSGRDWS*LLILLR
Trigger: TCGAAGAAGAATAAGCAGTCAGCTCCAGTCTCTTCC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTGATACCCTGTGGGGGTaGTACAGCATCCAGATGACT +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSDTLWG*YSIQMT
Trigger: AGTCATCTGGATGCTGTATCACCCCCACAGGGTATC...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGATACCCTGTGGGGGTaGTACAGCATCCAGATGACT +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKDTLWG*YSIQMT
Trigger: AGTCATCTGGATGCTGTATCACCCCCACAGGGTATC...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTCCAGTGTAAATTGTTaGGCCTCGGGAAGACCCAAT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLSSVNC*ASGRPN
Trigger: ATTGGGTCTTCCCGAGGCTCAACAATTTACACTGGA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGCAATGCAGTCAACACTaGGACAGGTTCCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQQCSQH*DRFPQR
Trigger: TCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTG...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATACTCTCACCTGCTTCCTaGATTCTCACAGAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVILSPAS*ILTEAR
Trigger: CCTTGCTTCTGTGAGAATTCAGGAAGCAGGTGAGAG...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACCTCAAAAGCCTCAATaGCTCAACAGGCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSPQKPQ*LNRLWF
Trigger: GAACCAAAGCCTGTTGAGTCATTGAGGCTTTTGAGG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTCCAGTACCTTCTACTTaGCCCAGATCCATGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSPVPST*PRSMQE
Trigger: CTCCTGCATGGATCTGGGTCAAGTAGAAGGTACTGG...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTTGGTACAGAGCTGGCTaGCCAGGCTCCATGAAATCT +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSWYRAG*PGSMKS
Trigger: AGATTTCATGGAGCCTGGTCAGCCAGCTCTGTACCA...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCTTAAAAACTCTGGAGTaGCCAAGTGTCCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSLKTLE*PSVPMS
Trigger: GCTCATAGGGACACTTGGTCACTCCAGAGTTTTTAA...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACGTAAGCAGGGATGTTaGAATTTGCTACCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSRKQGC*NLLPGE
Trigger: CTCACCAGGTAGCAAATTTCAACATCCCTGCTTACG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAAACGTTGCTTCTGTaGGTCAGGGTCTGGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQETLLL*VRVWLL
Trigger: AAGCAGCCAGACCCTGACTCACAGAAGCAACGTTTC...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATACAGAACCAAAGTCAATaGCCTTCACTCGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIQNQSQ*PSLGRA
Trigger: AGCCCTACCGAGTGAAGGTCATTGACTTTGGTTCTG...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAGCCACGCCTGCTGCGTaGGAACTCCTGACTGAATCT +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAATPAA*ELLTES
Trigger: AGATTCAGTCAGGAGTTCTCACGCAGCAGGCGTGGC...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369555.6
ENST00000626993.2
CDS-3UTR TCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCACTGCAGACTCTGCGGTaGTTTAAAGGTGCCTGGCGG +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWALQTLR*FKGAWR
Trigger: CCGCCAGGCACCTTTAAATCACCGCAGAGTCTGCAG...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426820.7
CDS-3UTR GCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGTCGGTCTGCCTTCTCTaGCAACATGTCTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQSVCLL*QHVCSL
Trigger: GAGGGAACAGACATGTTGGCAGAGAAGGCAGACCGA...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCGTATTCTCTTCGGTCTaGCTTCTCTGCCAACATGTC +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPVFSSV*LLCQHV
Trigger: GACATGTTGGCAGAGAAGGCAGACCGAAGAGAATAC...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGTATTCTCTTCGGTCTaGCTTCTCTGCCAACATGTC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSVFSSV*LLCQHV
Trigger: GACATGTTGGCAGAGAAGGCAGACCGAAGAGAATAC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCAGAAAGAGTAGCAGCTaGTGCAGTAGAACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPRKSSS*CSRTGS
Trigger: GCTTCCAGTTCTACTGCAGCAGCTGCTACTCTTTCT...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAGAAAGAGTAGCAGCTaGTGCAGTAGAACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSRKSSS*CSRTGS
Trigger: GCTTCCAGTTCTACTGCAGCAGCTGCTACTCTTTCT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGTGCAAGGAAACACCCTaGTGGGCAACTCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKCKETP*WATPGT
Trigger: AGTTCCTGGAGTTGCCCAGCAGGGTGTTTCCTTGCA...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGGATCTGTCTGAGTaGAAATCTGGGTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLMDLSE*KSGWFQ
Trigger: CTGGAACCACCCAGATTTGCACTCAGACAGATCCAT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGGCCTCTGGAATCATTaGTGTGGGCTGGACAGAGTT +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKGLWNH*CGLDRV
Trigger: AACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCC...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGGTCAGCAAGGATGGCTaGTGCATGATAGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLVSKDG*CMIVLY
Trigger: GTACAGCACTATCATGCAGCAGCCATCCTTGCTGAC...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGAGACTGGAGCTGACTaGTTATTCTTCTTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLETGAD*LFFFEG
Trigger: CCCTTCGAAGAAGAATAAGCAGTCAGCTCCAGTCTC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCGAGACTGGAGCTGACTaGTTATTCTTCTTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPETGAD*LFFFEG
Trigger: CCCTTCGAAGAAGAATAAGCAGTCAGCTCCAGTCTC...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATATAAGAAGATGTGGTaGGGAGGGGACTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIYKKMW*GGDCSQ
Trigger: TTGGGAGCAGTCCCCTCCGCACCACATCTTCTTATA...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCCATCTGCCACAACTCTaGCAGGCCCCTCCAAAACGG +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSHLPQL*QAPPKR
Trigger: CCGTTTTGGAGGGGCCTGGCAGAGTTGTGGCAGATG...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGCCTGGGTTGCTACAGTaGAGTCACCAAGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLPGLLQ*SHQAEF
Trigger: AAACTCAGCTTGGTGACTGCACTGTAGCAACCCAGG...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTCAGCATCCAGATGACTaGCCACTCACTGAAGCGACT +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSQHPDD*PLTEAT
Trigger: AGTCGCTTCAGTGAGTGGGCAGTCATCTGGATGCTG...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTTCGAGTGTAGCGGGCTaGCATGCTGGAAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLSSVAG*HAGRCR
Trigger: CCTACACCTTCCAGCATGGCAGCCCGCTACACTCGA...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCTCGAGTGTAGCGGGCTaGCATGCTGGAAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSSSVAG*HAGRCR
Trigger: CCTACACCTTCCAGCATGGCAGCCCGCTACACTCGA...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCCACCAGACACACCTGTaGAAAACAATTCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPHQTHL*KTIPRV
Trigger: GACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTG...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAGCCACATGGGGAAAATaGTTCTGTGAGAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIATWGK*FCENSA
Trigger: GGCTGAGTTCTCACAGAAGCATTTTCCCCATGTGGC...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCTTGACTCCTCTCACCTaGTTCCTGAATTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSLTPLT*FLNSHR
Trigger: TCTGTGAGAATTCAGGAAGCAGGTGAGAGGAGTCAA...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGCTCCCATCTCCATCCTaGACCTCCTTGACACCATCT +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKLPSPS*TSLTPS
Trigger: AGATGGTGTCAAGGAGGTGCAGGATGGAGATGGGAG...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCCATCAGCATTTTCACTaGTTAGGCGGGAAAGGATGC +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPHQHFH*LGGKGC
Trigger: GCATCCTTTCCCGCCTAAGCAGTGAAAATGCTGATG...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCATCAGCATTTTCACTaGTTAGGCGGGAAAGGATGC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLHQHFH*LGGKGC
Trigger: GCATCCTTTCCCGCCTAAGCAGTGAAAATGCTGATG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGAAGGCTGTGGCCACCTaGTGCAAGATTGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKKAVAT*CKIGLM
Trigger: CATCAGACCAATCTTGCAGCAGGTGGCCACAGCCTT...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCTGGAAGCTAGAACACTaGCCTGATTGTGCACTGTAT +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSWKLEH*PDCALY
Trigger: ATACAGTGCACAATCAGGCCAGTGTTCTAGCTTCCA...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCATCATTGCTGTGGGCTaGACAGAGTTGTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPIIAVG*TELCRA
Trigger: AGCTCTACACAACTCTGTCCAGCCCACAGCAATGAT...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATCATTGCTGTGGGCTaGACAGAGTTGTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLIIAVG*TELCRA
Trigger: AGCTCTACACAACTCTGTCCAGCCCACAGCAATGAT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCTGGAATCATTGCTGTaGGCTGGACAGAGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLLESLL*AGQSCV
Trigger: TACACAACTCTGTCCAGCCCACAGCAATGATTCCAG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAGTGGCCAATGTCACATaGTTAGTCAGCAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIVANVT*LVSKDG
Trigger: GCCATCCTTGCTGACTAACCATGTGACATTGGCCAC...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGGTGGCCAATGTCACATaGTTAGTCAGCAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLVANVT*LVSKDG
Trigger: GCCATCCTTGCTGACTAACCATGTGACATTGGCCAC...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCATCTAGAGAGGACTTaGAAGAGACTGGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLHLERT*KRLELT
Trigger: AGTCAGCTCCAGTCTCTTCCAAGTCCTCTCTAGATG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAATTATAAGAAGATGTaGTGCGGAGGGGACTGCTCC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLNYKKM*CGGDCS
Trigger: GGAGCAGTCCCCTCCGCACCACATCTTCTTATAATT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAATTATAAGAAGATGTaGTGCGGAGGGGACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSNYKKM*CGGDCS
Trigger: GGAGCAGTCCCCTCCGCACCACATCTTCTTATAATT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCGATGACATTAGACCTTaGCTTCAGTCCAGAGCTACT +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLDDIRP*LQSRAT
Trigger: AGTAGCTCTGGACTGAAGCCAAGGTCTAATGTCATC...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCACTCAGGGTATCAGTaGAATAAGGGCTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLHSGYQ*NKGCSK
Trigger: CTTTGAGCAGCCCTTATTCCACTGATACCCTGAGTG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACACTCAGGGTATCAGTaGAATAAGGGCTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSHSGYQ*NKGCSK
Trigger: CTTTGAGCAGCCCTTATTCCACTGATACCCTGAGTG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCAAGCTGAGTTTTCAGTaGAGGCACAATGATAGTGCG +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLKLSFQ*RHNDSA
Trigger: CGCACTATCATTGTGCCTCCACTGAAAACTCAGCTT...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGCTGGCTAAGATTGAGTaGTTGTGCTGCACTGGTCCC +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKLAKIE*LCCTGP
Trigger: GGGACCAGTGCAGCACAACCACTCAATCTTAGCCAG...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCGATGACTGCTGGTTCTaGCTAAGATTGAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLDDCWF*LRLSGC
Trigger: ACAACCACTCAATCTTAGCCAGAACCAGCAGTCATC...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGGCCGCCGATGACTGCTaGTTCTGGCTAAGATTGAGT +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMAADDC*FWLRLS
Trigger: ACTCAATCTTAGCCAGAACCAGCAGTCATCGGCGGC...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGCCGCCGATGACTGCTaGTTCTGGCTAAGATTGAGT +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQAADDC*FWLRLS
Trigger: ACTCAATCTTAGCCAGAACCAGCAGTCATCGGCGGC...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTGCCGCCGATGACTGCTaGTTCTGGCTAAGATTGAGT +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSAADDC*FWLRLS
Trigger: ACTCAATCTTAGCCAGAACCAGCAGTCATCGGCGGC...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGACAGATGAGCCTGGCTTaGCAGGTGAGCAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRQMSLA*QVSRGR
Trigger: CCGGCCCCTGCTCACCTGCCAAGCCAGGCTCATCTG...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGTCCCCAAATCCTTTATaGGCAGGAATGTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLSPNPL*AGMSPS
Trigger: GGATGGGGACATTCCTGCCCATAAAGGATTTGGGGA...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATACTACCTGCCCCATCTTaGAAGCCCTTACTCCTTACA +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVILPAPS*KPLLLT
Trigger: TGTAAGGAGTAAGGGCTTCCAAGATGGGGCAGGTAG...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCACTGGGGTGCAGGAATaGGATTTGGTTTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSTGVQE*DLVFFP
Trigger: AGGAAAGAAAACCAAATCCCATTCCTGCACCCCAGT...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGATCTAGTGGAGGACAATaGATGAGCAATCACAAAAGC +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGSSGGQ*MSNHKS
Trigger: GCTTTTGTGATTGCTCATCCATTGTCCTCCACTAGA...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAATTACTGTGCTTGCCTaGCTAAGGGCAGTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSITVLA*LRAVKL
Trigger: AAGCTTGACTGCCCTTAGCCAGGCAAGCACAGTAAT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGTCTTTGTGGTCACAGTaGTGGTTGTGGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQSLWSQ*WLWQQH
Trigger: GTGCTGCTGCCACAACCACCACTGTGACCACAAAGA...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGTCTTTGTGGTCACAGTaGTGGTTGTGGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKSLWSQ*WLWQQH
Trigger: GTGCTGCTGCCACAACCACCACTGTGACCACAAAGA...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAACTGCTACTCTTTGTaGTCACAGTGGTGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSNCYSL*SQWWLW
Trigger: CCACAACCACCACTGTGACCACAAAGAGTAGCAGTT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAAATCCCCTTCTCCGCTaGAACTGCTACTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVINPLLR*NCYSLW
Trigger: CCACAAAGAGTAGCAGTTCCAGCGGAGAAGGGGATT...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACACCTGCTGCAAGATTaGTCTGATGTACTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSHLLQD*SDVLEW
Trigger: CCACTCAAGTACATCAGACCAATCTTGCAGCAGGTG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCCACCTGCTGCAAGATTaGTCTGATGTACTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPHLLQD*SDVLEW
Trigger: CCACTCAAGTACATCAGACCAATCTTGCAGCAGGTG...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGCTTCATCAAGGCTGTaGCCACCTGCTGCAAGATTG +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQASSRL*PPAARL
Trigger: CAATCTTGCAGCAGGTGGCCACAGCCTTGATGAAGC...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTATCACACAGCCCAGTaGCCACATATCAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLYHTAQ*PHINSF
Trigger: GAAGCTATTGATATGTGGTCACTGGGCTGTGTGATA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGACTGTATCATACATGTaGACCCTCCGCTTGCAGATC +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLTVSYM*TLRLQI
Trigger: GATCTGCAAGCGGAGGGTTCACATGTATGATACAGT...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTGCACTGTATTGAGCTaGTTGCTGAAGCTCATGGTT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLCTVLS*LLKLMV
Trigger: AACCATGAGCTTCAGCAATCAGCTCAATACAGTGCA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGCACTGTATTGAGCTaGTTGCTGAAGCTCATGGTT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSCTVLS*LLKLMV
Trigger: AACCATGAGCTTCAGCAATCAGCTCAATACAGTGCA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAGTGATGGTGGCTACTTaGGGGTGGAGAGTTGCTACC +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAVMVAT*GWRVAT
Trigger: GGTAGCAACTCTCCACCCTCAAGTAGCCACCATCAC...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000426820.7
CDS-3UTR TCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTCTGTACTGGTTGCCATaGGAGTGGGCATTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLLYWLP*EWAFLQ
Trigger: CTGGAGGAATGCCCACTCTCATGGCAACCAGTACAG...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGGATTGTTGTTGTCTaGCAACATGGGCAACACCAA +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSWIVVV*QHGQHQ
Trigger: TTGGTGTTGCCCATGTTGTCAGACAACAACAATCCA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTGGATTGTTGTTGTCTaGCAACATGGGCAACACCAA +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPWIVVV*QHGQHQ
Trigger: TTGGTGTTGCCCATGTTGTCAGACAACAACAATCCA...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTGGATTGTTGTTGTCTaGCAACATGGGCAACACCAA +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLWIVVV*QHGQHQ
Trigger: TTGGTGTTGCCCATGTTGTCAGACAACAACAATCCA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGGGAAGAGACTGGAGCTaGCTGCTTATTCTTCTTCGA +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLGRDWS*LLILLR
Trigger: TCGAAGAAGAATAAGCAGTCAGCTCCAGTCTCTTCC...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTATTGCTCAGGAGACCTaGGGCCTGGGTTGCTACAGT +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLIAQET*GLGCYS
Trigger: ACTGTAGCAACCCAGGCCTCAGGTCTCCTGAGCAAT...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGTGTGGGGAGAAAAGATaGGCAATGGAGCTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKCGEKR*AMELVE
Trigger: CTCAACCAGCTCCATTGCTCATCTTTTCTCCCCACA...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGACCACGCTGGCAGAAGTaGGGAGGCTGGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRPRWQK*GGWAQH
Trigger: GTGTTGGGCCCAGCCTCCTCACTTCTGCCAGCGTGG...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCTGTTGGCAGGGAAACTaGGAACAATGCATTACACAA +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLCWQGN*EQCITQ
Trigger: TTGTGTAATGCATTGTTCTCAGTTTCCCTGCCAACA...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGGGAAAATGCTTCTGTaGGAACTCAGCCGAGAATCC +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKGKMLL*ELSRES
Trigger: GGATTCTCGGCTGAGTTCTCACAGAAGCATTTTCCC...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGCTCTCACCTGCTTCCTaGATTCTCACAGAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKLSPAS*ILTEAR
Trigger: CCTTGCTTCTGTGAGAATTCAGGAAGCAGGTGAGAG...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGGACAATTTCACAGCTTaGAGGGCCCCAAGACTATAC +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLDNFTA*RAPRLY
Trigger: GTATAGTCTTGGGGCCCTTCAAGCTGTGAAATTGTC...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAGATCCATGCAGGAGCTaGGAGTACAAGGACAATTTC +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIDPCRS*EYKDNF
Trigger: GAAATTGTCCTTGTACTCTCAGCTCCTGCATGGATC...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAGCTGACCAGGCTCCATaGAATCTCCCATCTCCATCC +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPADQAP*NLPSPS
Trigger: GGATGGAGATGGGAGATTTCATGGAGCCTGGTCAGC...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAGAGGTCAGGTCACTGTaGCCCAGGCCAGCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLREVRSL*PRPAAH
Trigger: GTGAGCAGCTGGCCTGGGTCACAGTGACCTGACCTC...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTTAAAAACTCTGGAGTaGCCAAGTGTCCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLLKTLE*PSVPMS
Trigger: GCTCATAGGGACACTTGGTCACTCCAGAGTTTTTAA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTAGGCGGAAGTGCAGCTaGATGGACTCTCTAGGACGA +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPRRKCS*MDSLGR
Trigger: TCGTCCTAGAGAGTCCATTCAGCTGCACTTCCGCCT...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACGGCACTCGACGACACTaGTGGGGGCGAAAACACTTG +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADGTRRH*WGRKHL
Trigger: CAAGTGTTTTCGCCCCCATCAGTGTCGTCGAGTGCC...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCGCTGCTTTGGAAGGTTaGTGTAGCAGCACTGCCCGA +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGAALEG*CSSTAR
Trigger: TCGGGCAGTGCTGCTACATCAACCTTCCAAAGCAGC...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAGCTGCTTTGGAAGGTTaGTGTAGCAGCACTGCCCGA +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAAALEG*CSSTAR
Trigger: TCGGGCAGTGCTGCTACATCAACCTTCCAAAGCAGC...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGGGGATGTTCTTCTATaGTCTGCACACTACCGTTGC +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKGDVLL*SAHYRC
Trigger: GCAACGGTAGTGTGCAGATCATAGAAGAACATCCCC...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGACTGAAAGCACTCGTATaGACGGACAAAATTATACTC +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGLKALV*TDKIIL
Trigger: GAGTATAATTTTGTCCGTTCATACGAGTGCTTTCAG...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGTCAGACCAAGACTCTTaGGCTTCATCAAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQSDQDS*ASSRLW
Trigger: CCACAGCCTTGATGAAGCTCAAGAGTCTTGGTCTGA...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCAAACACTTGCAGCTGTaGTGCCATACCGCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGKHLQL*CHTAGV
Trigger: CACACCGGCGGTATGGCATCACAGCTGCAAGTGTTT...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000369555.6
ENST00000369558.5
CDS-3UTR GCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGCGCCGGCCGGCCGGCTaGGCAGCTCAGAGTAAAGGG +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKRRPAG*AAQSKG
Trigger: CCCTTTACTCTGAGCTGCGCAGCCGGCCGGCCGGCG...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
CDS-3UTR GCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTAGCAAGGATGGCTGCTaGATGATAGTGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSSKDGC*MIVLYW
Trigger: CCAGTACAGCACTATCATGCAGCAGCCATCCTTGCT...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGTCAGCAAGGATGGCTaGTGCATGATAGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQVSKDG*CMIVLY
Trigger: GTACAGCACTATCATGCAGCAGCCATCCTTGCTGAC...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTTGGTGCGGAGGGGACTaGTCCCAACCAGAGAATAGA +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPWCGGD*SQPENR
Trigger: TCTATTCTCTGGTTGGGAGCAGTCCCCTCCGCACCA...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCATGGTGCGGAGGGGACTaGTCCCAACCAGAGAATAGA +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPWCGGD*SQPENR
Trigger: TCTATTCTCTGGTTGGGAGCAGTCCCCTCCGCACCA...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCATCTGCCACAACTCTaGCAGGCCCCTCCAAAACGG +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFHLPQL*QAPPKR
Trigger: CCGTTTTGGAGGGGCCTGGCAGAGTTGTGGCAGATG...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAGGAGCCGCCGATGACTaGTGGTTCTGGCTAAGATTG +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAGAADD*WFWLRL
Trigger: CAATCTTAGCCAGAACCAGCAGTCATCGGCGGCTCC...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCTCGAGTGTAGCGGGCTaGCATGCTGGAAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFSSVAG*HAGRCR
Trigger: CCTACACCTTCCAGCATGGCAGCCCGCTACACTCGA...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCATTCCTCCTCCCTCATaGTCACCAACTATAAGTAGG +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPIPPPS*SPTISR
Trigger: CCTACTTATAGTTGGTGAGCATGAGGGAGGAGGAAT...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAATTCCTCCTCCCTCATaGTCACCAACTATAAGTAGG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSIPPPS*SPTISR
Trigger: CCTACTTATAGTTGGTGAGCATGAGGGAGGAGGAAT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCCCTGCAGAACAAGTTaGTGGCTAAGAAATTTCAAG +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSPCRTS*WLRNFK
Trigger: CTTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGG...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAGCTTCAGTGGGCCCCTaGAGAACAAGTTGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAASVGP*RTSCWL
Trigger: TAGCCAGCAACTTGTTCTGCAGGGGCCCACTGAAGC...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCGCTTCAGTGGGCCCCTaGAGAACAAGTTGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGASVGP*RTSCWL
Trigger: TAGCCAGCAACTTGTTCTGCAGGGGCCCACTGAAGC...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCTCTTCCTTGGTAACTaGAGAAGATGGGCATCTGAA +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLLFLGN*RRWASE
Trigger: TTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGCCACATGGGGAAAATaGTTCTGTGAGAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQATWGK*FCENSA
Trigger: GGCTGAGTTCTCACAGAAGCATTTTCCCCATGTGGC...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTTGACTCCTCTCACCTaGTTCCTGAATTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPLTPLT*FLNSHR
Trigger: TCTGTGAGAATTCAGGAAGCAGGTGAGAGGAGTCAA...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGTGCAGGAAGGACTaGCACATGGGAAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLMCRKD*HMGKGK
Trigger: TTTTCCTTTTCCCATGTGGCAGTCCTTCCTGCACAT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGGGAATGTCAACTATGTaGAGGAAGGACTGCCACATG +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLGMSTM*RKDCHM
Trigger: CATGTGGCAGTCCTTCCTGCACATAGTTGACATTCC...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAGCTGTACGGACTACCTaGCCCATCTTGGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPAVRTT*PILEAL
Trigger: AAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGC...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCTTATTGGACTGGGGTaGAGGAATGGGATTTGGTTT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLLIGLG*RNGIWF
Trigger: AAACCAAATCCCATTCCTGCACCCCAGTCCAATAAG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCATCTTAAGTGGTATCTaGTTATTGGACTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLILSGI*LLDWGA
Trigger: TGCACCCCAGTCCAATAAGCAGATACCACTTAAGAT...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTGTGACCCAGGCCAGCTaGTCACTAAATTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTVTQAS*SLNSPG
Trigger: GCCTGGTGAATTTAGTGAGCAGCTGGCCTGGGTCAC...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCGTGACCCAGGCCAGCTaGTCACTAAATTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSVTQAS*SLNSPG
Trigger: GCCTGGTGAATTTAGTGAGCAGCTGGCCTGGGTCAC...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGGAAGAAGTTGGAAATaGCAAGTTCTGAGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLGRSWK*QVLRED
Trigger: GTCCTCTCTCAGAACTTGGCATTTCCAACTTCTTCC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGGCTGTTACAACAATATaGTCCACTGCAGGAGCTGGG +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMAVTTI*STAGAG
Trigger: CCCAGCTCCTGCAGTGGAGCATATTGTTGTAACAGC...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATCTGCACACTACCGTTaGTGTCAACTTCCTCACTTT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSSAHYR*CQLPHF
Trigger: AAAGTGAGGAAGTTGACAGCAACGGTAGTGTGCAGA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGACCACAGTCCTGTTTTaGAGCATGAGAGGGGGATGT +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKTTVLF*SMRGGC
Trigger: ACATCCCCCTCTCATGCTGCAAAACAGGACTGTGGT...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATTAGGCGGGAAAGGATaGTCACTTCAATCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSLGGKG*SLQSVL
Trigger: AAGGACAGATTGAAGTGAGCATCCTTTCCCGCCTAA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGCATCAGCATTTTCACTaGTTAGGCGGGAAAGGATGC +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLHQHFH*LGGKGC
Trigger: GCATCCTTTCCCGCCTAAGCAGTGAAAATGCTGATG...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTGGGGGCGAAAACACTTaGAGCTGTGATGCCATACCG +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLGGENT*SCDAIP
Trigger: CGGTATGGCATCACAGCTGCAAGTGTTTTCGCCCCC...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000369555.6
ENST00000369558.5
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGGAAGCTAGAACACTaGCCTGATTGTGCACTGTAT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSWKLEH*PDCALY
Trigger: ATACAGTGCACAATCAGGCCAGTGTTCTAGCTTCCA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAATCATTGCTGTGGGCTaGACAGAGTTGTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIIIAVG*TELCRA
Trigger: AGCTCTACACAACTCTGTCCAGCCCACAGCAATGAT...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTACTCCCCATGGCCTCTaGAATCATTGCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPTPHGL*NHCCGL
Trigger: CAGCCCACAGCAATGATTCCAGAGGCCATGGGGAGT...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTGCTGTCCACTCCCCATaGCCTCTGGAATCATTGCTG +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTAVHSP*PLESLL
Trigger: CAGCAATGATTCCAGAGGCCATGGGGAGTGGACAGC...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTGCTGTCCACTCCCCATaGCCTCTGGAATCATTGCTG +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPAVHSP*PLESLL
Trigger: CAGCAATGATTCCAGAGGCCATGGGGAGTGGACAGC...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTGGCCAATGTCACATaGTTAGTCAGCAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKVANVT*LVSKDG
Trigger: GCCATCCTTGCTGACTAACCATGTGACATTGGCCAC...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGGTGGCCAATGTCACATaGTTAGTCAGCAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMVANVT*LVSKDG
Trigger: GCCATCCTTGCTGACTAACCATGTGACATTGGCCAC...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAAATTATAAGAAGATGTaGTGCGGAGGGGACTGCTCC +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVINYKKM*CGGDCS
Trigger: GGAGCAGTCCCCTCCGCACCACATCTTCTTATAATT...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTCAGTCCAGAGCTACTaGGCTTGTATTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLSVQSY*ACICCP
Trigger: AGGACAACAAATACAAGCCCAGTAGCTCTGGACTGA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATCAGTCCAGAGCTACTaGGCTTGTATTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSSVQSY*ACICCP
Trigger: AGGACAACAAATACAAGCCCAGTAGCTCTGGACTGA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCGATGACATTAGACCTTaGCTTCAGTCCAGAGCTACT +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPDDIRP*LQSRAT
Trigger: AGTAGCTCTGGACTGAAGCCAAGGTCTAATGTCATC...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGATGACATTAGACCTTaGCTTCAGTCCAGAGCTACT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLDDIRP*LQSRAT
Trigger: AGTAGCTCTGGACTGAAGCCAAGGTCTAATGTCATC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATACACTCAGGGTATCAGTaGAATAAGGGCTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIHSGYQ*NKGCSK
Trigger: CTTTGAGCAGCCCTTATTCCACTGATACCCTGAGTG...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCAAGCTGAGTTTTCAGTaGAGGCACAATGATAGTGCG +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPKLSFQ*RHNDSA
Trigger: CGCACTATCATTGTGCCTCCACTGAAAACTCAGCTT...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAGCTGAGTTTTCAGTaGAGGCACAATGATAGTGCG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLKLSFQ*RHNDSA
Trigger: CGCACTATCATTGTGCCTCCACTGAAAACTCAGCTT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCGATGACTGCTGGTTCTaGCTAAGATTGAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPDDCWF*LRLSGC
Trigger: ACAACCACTCAATCTTAGCCAGAACCAGCAGTCATC...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGATGACTGCTGGTTCTaGCTAAGATTGAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSDDCWF*LRLSGC
Trigger: ACAACCACTCAATCTTAGCCAGAACCAGCAGTCATC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAGATGAGCAATGGAGCTaGTTGAGCCCAGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWADEQWS*LSPVQQ
Trigger: CTGCTGCACTGGGCTCAACCAGCTCCATTGCTCATC...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCACACTGACAGGGACCTaGTGCACCAAAGTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSTLTGT*CTKVLG
Trigger: CCCTAGCACTTTGGTGCACCAGGTCCCTGTCAGTGT...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTACACTGACAGGGACCTaGTGCACCAAAGTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLTLTGT*CTKVLG
Trigger: CCCTAGCACTTTGGTGCACCAGGTCCCTGTCAGTGT...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTACACTGACAGGGACCTaGTGCACCAAAGTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTTLTGT*CTKVLG
Trigger: CCCTAGCACTTTGGTGCACCAGGTCCCTGTCAGTGT...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCCAATGTAGGATTGGGTaGCAAACTGGTGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPQCRIG*QTGVGT
Trigger: AGTACCAACACCAGTTTGCCACCCAATCCTACATTG...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACAATGTAGGATTGGGTaGCAAACTGGTGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSQCRIG*QTGVGT
Trigger: AGTACCAACACCAGTTTGCCACCCAATCCTACATTG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGATGCAGAACAAGTTGCTaGCTAAGAAATTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGCRTSC*LRNFKR
Trigger: CCTCTTGAAATTTCTTAGCCAGCAACTTGTTCTGCA...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGAACCTTCTGCTTCAGTaGGCCCCTGCAGAACAAGTT +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQNLLLQ*APAEQV
Trigger: AACTTGTTCTGCAGGGGCCCACTGAAGCAGAAGGTT...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGGTAACTGCAGAAGATaGGCATCTGAACTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLGNCRR*ASELFQ
Trigger: TTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGTAACTGCAGAAGATaGGCATCTGAACTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSGNCRR*ASELFQ
Trigger: TTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTCCACGGGGGCTTGCTaGTCCATCCTAAGGCAAGCT +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADSTGAC*SILRQA
Trigger: AGCTTGCCTTAGGATGGACCAGCAAGCCCCCGTGGA...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCTTCTCCTCATAGTATaGGGACATGGTAAGCAATAC +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSLLLIV*GHGKQY
Trigger: GTATTGCTTACCATGTCCCCATACTATGAGGAGAAG...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGTCCCCAAATCCTTTATaGGCAGGAATGTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMSPNPL*AGMSPS
Trigger: GGATGGGGACATTCCTGCCCATAAAGGATTTGGGGA...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGTGGTATCTGCTTATTaGACTGGGGTGCAGGAATGG +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQVVSAY*TGVQEW
Trigger: CCATTCCTGCACCCCAGTCCAATAAGCAGATACCAC...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCCTGGTGAGAGGAGTTaGCTTGCCCTTGTGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFPGERS*LALVWL
Trigger: CAGCCACACAAGGGCAAGCCAACTCCTCTCACCAGG...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGCAATCTGTCCTTGTCTaGCATAGGAGGGGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQQSVLV*HRRGGS
Trigger: AGAACCACCCCTCCTATGCCAGACAAGGACAGATTG...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGGCTTAAGGTCAGCGTaGATCAGACCAAGACTCTTG +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKGLRSA*IRPRLL
Trigger: CAAGAGTCTTGGTCTGATCCACGCTGACCTTAAGCC...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGGGCTGGCGAACTaGATCAACCAGCATGATGTT +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKVGLAN*INQHDV
Trigger: AACATCATGCTGGTTGATCCAGTTCGCCAGCCCTAC...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACTTCCGAGCTTCTTTTaGTTTTATTCCAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSLPSFF*FYSSLQ
Trigger: CTGGAGACTGGAATAAAATCAAAAGAAGCTCGGAAG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCGTAGACATATTCACCTaGGCCATGTCATCTAAGCAA +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPVDIFT*AMSSKQ
Trigger: TTGCTTAGATGACATGGCTCAGGTGAATATGTCTAC...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGTAGACATATTCACCTaGGCCATGTCATCTAAGCAA +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSVDIFT*AMSSKQ
Trigger: TTGCTTAGATGACATGGCTCAGGTGAATATGTCTAC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTACTGTATCATACATGTaGACCCTCCGCTTGCAGATC +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSTVSYM*TLRLQI
Trigger: GATCTGCAAGCGGAGGGTTCACATGTATGATACAGT...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGACTGTATCATACATGTaGACCCTCCGCTTGCAGATC +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMTVSYM*TLRLQI
Trigger: GATCTGCAAGCGGAGGGTTCACATGTATGATACAGT...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGACTGTATCATACATGTaGACCCTCCGCTTGCAGATC +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKTVSYM*TLRLQI
Trigger: GATCTGCAAGCGGAGGGTTCACATGTATGATACAGT...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAGGGACTCTTGATCTaGCTCACTGTATCATACATG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLKGLLI*LTVSYM
Trigger: CATGTATGATACAGTGAGTCAGATCAAGAGTCCCTT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAAGGGACTCTTGATCTaGCTCACTGTATCATACATG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSKGLLI*LTVSYM
Trigger: CATGTATGATACAGTGAGTCAGATCAAGAGTCCCTT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGTGGAATGGATCTGTCTaGGTGCAAATCTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMWNGSV*VQIWVV
Trigger: AACCACCCAGATTTGCACTCAGACAGATCCATTCCA...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGTGGAATGGATCTGTCTaGGTGCAAATCTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQWNGSV*VQIWVV
Trigger: AACCACCCAGATTTGCACTCAGACAGATCCATTCCA...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCTGTACTGGTTGCCATaGGAGTGGGCATTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFLYWLP*EWAFLQ
Trigger: CTGGAGGAATGCCCACTCTCATGGCAACCAGTACAG...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCCCAACATTCAGAGGCTaGGCAGTGGCCAATGTCACA +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSPTFRG*AVANVT
Trigger: TGTGACATTGGCCACTGCTCAGCCTCTGAATGTTGG...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGGGAAGAGACTGGAGCTaGCTGCTTATTCTTCTTCGA +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMGRDWS*LLILLR
Trigger: TCGAAGAAGAATAAGCAGTCAGCTCCAGTCTCTTCC...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGGAAGAGACTGGAGCTaGCTGCTTATTCTTCTTCGA +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQGRDWS*LLILLR
Trigger: TCGAAGAAGAATAAGCAGTCAGCTCCAGTCTCTTCC...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCGATACCCTGTGGGGGTaGTACAGCATCCAGATGACT +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGDTLWG*YSIQMT
Trigger: AGTCATCTGGATGCTGTATCACCCCCACAGGGTATC...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAAACTGGTGTTGGTACTaGGCAGGGGCCACGCTGGCA +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRNWCWY*AGATLA
Trigger: TGCCAGCGTGGCCCCTGCTCAGTACCAACACCAGTT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTCAATGCAGTCAACACTaGGACAGGTTCCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLQCSQH*DRFPQR
Trigger: TCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTG...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAATGCAGTCAACACTaGGACAGGTTCCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGQCSQH*DRFPQR
Trigger: TCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTG...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCGGTAGCAACGCACAGTaGGAGAGCCACATGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFGSNAQ*ESHMGK
Trigger: TTTCCCCATGTGGCTCTCTCACTGTGCGTTGCTACC...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTCCTCAAAAGCCTCAATaGCTCAACAGGCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSPQKPQ*LNRLWF
Trigger: GAACCAAAGCCTGTTGAGTCATTGAGGCTTTTGAGG...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTGATCCATGCAGGAGCTaGGAGTACAAGGACAATTTC +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSDPCRS*EYKDNF
Trigger: GAAATTGTCCTTGTACTCTCAGCTCCTGCATGGATC...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTTGGTACAGAGCTGGCTaGCCAGGCTCCATGAAATCT +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLWYRAG*PGSMKS
Trigger: AGATTTCATGGAGCCTGGTCAGCCAGCTCTGTACCA...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCAAACTCCAAATACTTTaGCAGCTCCTCGGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPKLQIL*QLLGVQ
Trigger: TTGAACACCGAGGAGCTGTCAAAGTATTTGGAGTTT...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCAATCTAAAGCCACAGTaGGCACATACATACACATTC +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSNLKPQ*AHTYTF
Trigger: GAATGTGTATGTATGTGCTCACTGTGGCTTTAGATT...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAGCCTTAAGCTGGTTTaGGGTCAGGTCACTGTGACC +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPSLKLV*GQVTVT
Trigger: GGTCACAGTGACCTGACCTCAAACCAGCTTAAGGCT...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACGCTGTGATGCCATACTaGGGCGGAAGTGCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADAVMPY*GGSAAE
Trigger: TTCAGCTGCACTTCCGCCTCAGTATGGCATCACAGC...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTTCGGTCTGCCTTCTCTaGCAACATGTCTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTSVCLL*QHVCSL
Trigger: GAGGGAACAGACATGTTGGCAGAGAAGGCAGACCGA...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCGGTCTGCCTTCTCTaGCAACATGTCTGTTCCCTC +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWASVCLL*QHVCSL
Trigger: GAGGGAACAGACATGTTGGCAGAGAAGGCAGACCGA...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTATTCTCTTCGGTCTaGCTTCTCTGCCAACATGTC +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKVFSSV*LLCQHV
Trigger: GACATGTTGGCAGAGAAGGCAGACCGAAGAGAATAC...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTTGCAAGGAAACACCCTaGTGGGCAACTCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPCKETP*WATPGT
Trigger: AGTTCCTGGAGTTGCCCAGCAGGGTGTTTCCTTGCA...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGATGGATCTGTCTGAGTaGAAATCTGGGTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQMDLSE*KSGWFQ
Trigger: CTGGAACCACCCAGATTTGCACTCAGACAGATCCAT...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTATGGATCTGTCTGAGTaGAAATCTGGGTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSMDLSE*KSGWFQ
Trigger: CTGGAACCACCCAGATTTGCACTCAGACAGATCCAT...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAGGCCTCTGGAATCATTaGTGTGGGCTGGACAGAGTT +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPGLWNH*CGLDRV
Trigger: AACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCC...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTGGCCTCTGGAATCATTaGTGTGGGCTGGACAGAGTT +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLGLWNH*CGLDRV
Trigger: AACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCC...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCGGCCTCTGGAATCATTaGTGTGGGCTGGACAGAGTT +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSGLWNH*CGLDRV
Trigger: AACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCC...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGACTCCAGTCAGCTAGCTaGTGTCCACTCCCCATGGCC +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRLQSAS*CPLPMA
Trigger: GGCCATGGGGAGTGGACAGCAGCTAGCTGACTGGAG...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGGAGACTGGAGCTGACTaGTTATTCTTCTTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMETGAD*LFFFEG
Trigger: CCCTTCGAAGAAGAATAAGCAGTCAGCTCCAGTCTC...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAAAACGGATCCACTATTaGCTCGGAGAGCACTCAGGG +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAKRIHY*LGEHSG
Trigger: CCCTGAGTGCTCTCCGAGGCAATAGTGGATCCGTTT...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACCATCTGCCACAACTCTaGCAGGCCCCTCCAAAACGG +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYHLPQL*QAPPKR
Trigger: CCGTTTTGGAGGGGCCTGGCAGAGTTGTGGCAGATG...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTCAGCATCCAGATGACTaGCCACTCACTGAAGCGACT +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTQHPDD*PLTEAT
Trigger: AGTCGCTTCAGTGAGTGGGCAGTCATCTGGATGCTG...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCCCTGCAGAACAAGTTaGTGGCTAAGAAATTTCAAG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLPCRTS*WLRNFK
Trigger: CTTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCCCCTGCAGAACAAGTTaGTGGCTAAGAAATTTCAAG +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPPCRTS*WLRNFK
Trigger: CTTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGG...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTCAGAGAAAAACCTTCTaGTTCAGTGGGCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLQRKTF*FSGPLQ
Trigger: CTGCAGGGGCCCACTGAAGCAGAAGGTTTTTCTCTG...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCACAGAGAAAAACCTTCTaGTTCAGTGGGCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPQRKTF*FSGPLQ
Trigger: CTGCAGGGGCCCACTGAAGCAGAAGGTTTTTCTCTG...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGACAGCAAATGGTGAGCTaGCTTTTAAACACTACTTTA +
Preference number: 4 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGQQMVS*LLNTTL
Trigger: TAAAGTAGTGTTTAAAAGGCAGCTCACCATTTGCTG...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCGGCAAAGCTCATCAATaGCAGTATCTCATAATAGAC +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLGKAHQ*QYLIID
Trigger: GTCTATTATGAGATACTGGCATTGATGAGCTTTGCC...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGAGCATTCAATTTGCTaGTGGCATACAAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLEHSIC*WHTKEA
Trigger: AGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCAGAGAGCATTCAATTTaGTGCTGGCATACAAAGGAA +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLREHSI*CWHTKE
Trigger: TTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCAGAGAGCATTCAATTTaGTGCTGGCATACAAAGGAA +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSREHSI*CWHTKE
Trigger: TTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTCCTTGCAGGCAATaGCCCTGCTCATTCAGCACT +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWASPCRQ*PCSFST
Trigger: AGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGA...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTTCTCCTTGCAGGCAATaGCCCTGCTCATTCAGCACT +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLSPCRQ*PCSFST
Trigger: AGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGA...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGTTGACTCCTCTCACCTaGTTCCTGAATTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLLTPLT*FLNSHR
Trigger: TCTGTGAGAATTCAGGAAGCAGGTGAGAGGAGTCAA...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATCTTAAGTGGTATCTaGTTATTGGACTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLILSGI*LLDWGA
Trigger: TGCACCCCAGTCCAATAAGCAGATACCACTTAAGAT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACGTGACCCAGGCCAGCTaGTCACTAAATTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADVTQAS*SLNSPG
Trigger: GCCTGGTGAATTTAGTGAGCAGCTGGCCTGGGTCAC...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGGGAAGAAGTTGGAAATaGCAAGTTCTGAGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLGRSWK*QVLRED
Trigger: GTCCTCTCTCAGAACTTGGCATTTCCAACTTCTTCC...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGACACATTACTGTGCTTaGCTGGCTAAGGGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMTHYCA*LAKGSQ
Trigger: TTGACTGCCCTTAGCCAGGCAAGCACAGTAATGTGT...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCATCGCATAGTACTGATTaGAGTAGGAGTCGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPSHSTD*SRSRWA
Trigger: GGCCCACCGACTCCTACTGCAATCAGTACTATGCGA...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTTCGCATAGTACTGATTaGAGTAGGAGTCGGTGGGCC +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTSHSTD*SRSRWA
Trigger: GGCCCACCGACTCCTACTGCAATCAGTACTATGCGA...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGGCTGGGAGGGTTTTaGTGTGGGTATAATATTTGT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSWLGGF*CGYNIC
Trigger: ACAAATATTATACCCACAGCAAAACCCTCCCAGCCA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGGATGTTGAAATTTaGTACCTGGTGAGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLRDVEI*YLVRGV
Trigger: AACTCCTCTCACCAGGTAGCAAATTTCAACATCCCT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGTTCTTCTATGATCTaGACACTACCGTTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSCSSMI*TLPLLS
Trigger: TGACAGCAACGGTAGTGTGCAGATCATAGAAGAACA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAAAGGCTGTGGCCACCTaGTGCAAGATTGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAKAVAT*CKIGLM
Trigger: CATCAGACCAATCTTGCAGCAGGTGGCCACAGCCTT...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGATCATTGCTGTGGGCTaGACAGAGTTGTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMIIAVG*TELCRA
Trigger: AGCTCTACACAACTCTGTCCAGCCCACAGCAATGAT...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGCTGGAATCATTGCTGTaGGCTGGACAGAGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQLESLL*AGQSCV
Trigger: TACACAACTCTGTCCAGCCCACAGCAATGATTCCAG...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACACTCCCCATGGCCTCTaGAATCATTGCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADTPHGL*NHCCGL
Trigger: CAGCCCACAGCAATGATTCCAGAGGCCATGGGGAGT...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACGCTGTCCACTCCCCATaGCCTCTGGAATCATTGCTG +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADAVHSP*PLESLL
Trigger: CAGCAATGATTCCAGAGGCCATGGGGAGTGGACAGC...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGTTGTCTGACAACATaGGCAACACCAACATTCAGA +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSCCLTT*ATPTFR
Trigger: TCTGAATGTTGGTGTTGCCCATGTTGTCAGACAACA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCATCTAGAGAGGACTTaGAAGAGACTGGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMHLERT*KRLELT
Trigger: AGTCAGCTCCAGTCTCTTCCAAGTCCTCTCTAGATG...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGAATTATAAGAAGATGTaGTGCGGAGGGGACTGCTCC +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQNYKKM*CGGDCS
Trigger: GGAGCAGTCCCCTCCGCACCACATCTTCTTATAATT...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATCAGTCCAGAGCTACTaGGCTTGTATTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVISVQSY*ACICCP
Trigger: AGGACAACAAATACAAGCCCAGTAGCTCTGGACTGA...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGAAGAGTCAGAGTCTaGAGAATCATTGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLRRVRV*RIIDSD
Trigger: GTCACTGTCAATGATTCTCCAGACTCTGACTCTTCT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAGAAGAGTCAGAGTCTaGAGAATCATTGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSRRVRV*RIIDSD
Trigger: GTCACTGTCAATGATTCTCCAGACTCTGACTCTTCT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCACTCAGGGTATCAGTaGAATAAGGGCTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMHSGYQ*NKGCSK
Trigger: CTTTGAGCAGCCCTTATTCCACTGATACCCTGAGTG...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTCTGGCTAAGATTGAGTaGTTGTGCTGCACTGGTCCC +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLLAKIE*LCCTGP
Trigger: GGGACCAGTGCAGCACAACCACTCAATCTTAGCCAG...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCACTGGCTAAGATTGAGTaGTTGTGCTGCACTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPLAKIE*LCCTGP
Trigger: GGGACCAGTGCAGCACAACCACTCAATCTTAGCCAG...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCGATGAGCAATGGAGCTaGTTGAGCCCAGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFDEQWS*LSPVQQ
Trigger: CTGCTGCACTGGGCTCAACCAGCTCCATTGCTCATC...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACGATGAGCAATGGAGCTaGTTGAGCCCAGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADDEQWS*LSPVQQ
Trigger: CTGCTGCACTGGGCTCAACCAGCTCCATTGCTCATC...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCACACTGACAGGGACCTaGTGCACCAAAGTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFTLTGT*CTKVLG
Trigger: CCCTAGCACTTTGGTGCACCAGGTCCCTGTCAGTGT...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATACAATGTAGGATTGGGTaGCAAACTGGTGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIQCRIG*QTGVGT
Trigger: AGTACCAACACCAGTTTGCCACCCAATCCTACATTG...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCTTCTCCTCATAGTATaGGGACATGGTAAGCAATAC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLLLLIV*GHGKQY
Trigger: GTATTGCTTACCATGTCCCCATACTATGAGGAGAAG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATCTAGTGGAGGACAATaGATGAGCAATCACAAAAGC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSSSGGQ*MSNHKS
Trigger: GCTTTTGTGATTGCTCATCCATTGTCCTCCACTAGA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCTGGCTTGCCCTTGTGTaGCTGGGAGGGTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFWLALV*LGGFCC
Trigger: ACAGCAAAACCCTCCCAGCCACACAAGGGCAAGCCA...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTGGCTTGCCCTTGTGTaGCTGGGAGGGTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADWLALV*LGGFCC
Trigger: ACAGCAAAACCCTCCCAGCCACACAAGGGCAAGCCA...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTTCTTTGTGGTCACAGTaGTGGTTGTGGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTSLWSQ*WLWQQH
Trigger: GTGCTGCTGCCACAACCACCACTGTGACCACAAAGA...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGAACTGCTACTCTTTGTaGTCACAGTGGTGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMNCYSL*SQWWLW
Trigger: CCACAACCACCACTGTGACCACAAAGAGTAGCAGTT...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTAACTGCTACTCTTTGTaGTCACAGTGGTGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSNCYSL*SQWWLW
Trigger: CCACAACCACCACTGTGACCACAAAGAGTAGCAGTT...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGCACCTGCTGCAAGATTaGTCTGATGTACTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKHLLQD*SDVLEW
Trigger: CCACTCAAGTACATCAGACCAATCTTGCAGCAGGTG...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATACTTCCGAGCTTCTTTTaGTTTTATTCCAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVILPSFF*FYSSLQ
Trigger: CTGGAGACTGGAATAAAATCAAAAGAAGCTCGGAAG...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGGTAGACATATTCACCTaGGCCATGTCATCTAAGCAA +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLVDIFT*AMSSKQ
Trigger: TTGCTTAGATGACATGGCTCAGGTGAATATGTCTAC...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGTGGATTGTTGTTGTCTaGCAACATGGGCAACACCAA +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKWIVVV*QHGQHQ
Trigger: TTGGTGTTGCCCATGTTGTCAGACAACAACAATCCA...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGTGGATTGTTGTTGTCTaGCAACATGGGCAACACCAA +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQWIVVV*QHGQHQ
Trigger: TTGGTGTTGCCCATGTTGTCAGACAACAACAATCCA...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACATTGCTCAGGAGACCTaGGGCCTGGGTTGCTACAGT +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYIAQET*GLGCYS
Trigger: ACTGTAGCAACCCAGGCCTCAGGTCTCCTGAGCAAT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCGATACCCTGTGGGGGTaGTACAGCATCCAGATGACT +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFDTLWG*YSIQMT
Trigger: AGTCATCTGGATGCTGTATCACCCCCACAGGGTATC...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAGGTTGGAGCCGCCGATaGCTGCTGGTTCTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRGWSRR*LLVLAK
Trigger: CTTAGCCAGAACCAGCAGTCATCGGCGGCTCCAACC...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCTGTGGGGAGAAAAGATaGGCAATGGAGCTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSCGEKR*AMELVE
Trigger: CTCAACCAGCTCCATTGCTCATCTTTTCTCCCCACA...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGGGCTGGGCCCAACACTaGCAGGGACCTGGTGCACCA +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKGWAQH*QGPGAP
Trigger: TGGTGCACCAGGTCCCTGTCAGTGTTGGGCCCAGCC...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACCCACGCTGGCAGAAGTaGGGAGGCTGGGCCCAACAC +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHPRWQK*GGWAQH
Trigger: GTGTTGGGCCCAGCCTCCTCACTTCTGCCAGCGTGG...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAAACTGGTGTTGGTACTaGGCAGGGGCCACGCTGGCA +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRNWCWY*AGATLA
Trigger: TGCCAGCGTGGCCCCTGCTCAGTACCAACACCAGTT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCTATCAGCATTTTTCCTaGCCAGCAATCACAATAACA +
Preference number: 4 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLYQHFS*PAITIT
Trigger: TGTTATTGTGATTGCTGGTCAGGAAAAATGCTGATA...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCAAACACAGGAGCAATTaGGAGAATCTCAATAGTAAC +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSKHRSN*ENLNSN
Trigger: GTTACTATTGAGATTCTCTCAATTGCTCCTGTGTTT...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAGGGAAAATGCTTCTGTaGGAACTCAGCCGAGAATCC +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAGKMLL*ELSRES
Trigger: GGATTCTCGGCTGAGTTCTCACAGAAGCATTTTCCC...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCGGGAAAATGCTTCTGTaGGAACTCAGCCGAGAATCC +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGGKMLL*ELSRES
Trigger: GGATTCTCGGCTGAGTTCTCACAGAAGCATTTTCCC...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACGGTAGCAACGCACAGTaGGAGAGCCACATGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYGSNAQ*ESHMGK
Trigger: TTTCCCCATGTGGCTCTCTCACTGTGCGTTGCTACC...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTCTCTCACCTGCTTCCTaGATTCTCACAGAAGCAAGG +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPLSPAS*ILTEAR
Trigger: CCTTGCTTCTGTGAGAATTCAGGAAGCAGGTGAGAG...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACCCAGTACCTTCTACTTaGCCCAGATCCATGCAGGAG +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADPVPST*PRSMQE
Trigger: CTCCTGCATGGATCTGGGTCAAGTAGAAGGTACTGG...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACGCTGACCAGGCTCCATaGAATCTCCCATCTCCATCC +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYADQAP*NLPSPS
Trigger: GGATGGAGATGGGAGATTTCATGGAGCCTGGTCAGC...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAATCTAAAGCCACAGTaGGCACATACATACACATTC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLNLKPQ*AHTYTF
Trigger: GAATGTGTATGTATGTGCTCACTGTGGCTTTAGATT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACAGCCTTAAGCTGGTTTaGGGTCAGGTCACTGTGACC +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADSLKLV*GQVTVT
Trigger: GGTCACAGTGACCTGACCTCAAACCAGCTTAAGGCT...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTGTGGAGGACAATGGATaGGCAATCACAAAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPVEDNG*AITKAG
Trigger: GCCTGCTTTTGTGATTGCTCATCCATTGTCCTCCAC...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCGTGGAGGACAATGGATaGGCAATCACAAAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGVEDNG*AITKAG
Trigger: GCCTGCTTTTGTGATTGCTCATCCATTGTCCTCCAC...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTGTGGAGGACAATGGATaGGCAATCACAAAAGCAGGC +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTVEDNG*AITKAG
Trigger: GCCTGCTTTTGTGATTGCTCATCCATTGTCCTCCAC...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTAAACACTTGCAGCTGTaGTGCCATACTGAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPKHLQL*CHTEAE
Trigger: TTCCGCCTCAGTATGGCATCACAGCTGCAAGTGTTT...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCTGAAAGCACTCGTATaGACGGACAAAATTATACTC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLLKALV*TDKIIL
Trigger: GAGTATAATTTTGTCCGTTCATACGAGTGCTTTCAG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGAACCAAAGTCAATaGCCTTCACTCGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGQNQSQ*PSLGRA
Trigger: AGCCCTACCGAGTGAAGGTCATTGACTTTGGTTCTG...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCACAGAACCAAAGTCAATaGCCTTCACTCGGTAGGGCT +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPQNQSQ*PSLGRA
Trigger: AGCCCTACCGAGTGAAGGTCATTGACTTTGGTTCTG...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTGCAAGGAAACACCCTaGTGGGCAACTCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADCKETP*WATPGT
Trigger: AGTTCCTGGAGTTGCCCAGCAGGGTGTTTCCTTGCA...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGATGGCTGAGCAGCTGGTaGCTGGGGTACAATCGGTAC +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRWLSSW*LGYNRY
Trigger: GTACCGATTGTACCCCAGGCACCAGCTGCTCAGCCA...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAACCTCCAGGCCACGCCTaGAGTACAGCGGCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKPPGHA*STAAVC
Trigger: ACAGACTGCCGCTGTACTGCAGGCGTGGCCTGGAGG...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
CDS-3UTR GCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAGCAAGGATGGCTGCTaGATGATAGTGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPSKDGC*MIVLYW
Trigger: CCAGTACAGCACTATCATGCAGCAGCCATCCTTGCT...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTAGCAAGGATGGCTGCTaGATGATAGTGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTSKDGC*MIVLYW
Trigger: CCAGTACAGCACTATCATGCAGCAGCCATCCTTGCT...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACTGGTGCGGAGGGGACTaGTCCCAACCAGAGAATAGA +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYWCGGD*SQPENR
Trigger: TCTATTCTCTGGTTGGGAGCAGTCCCCTCCGCACCA...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCATATAAGAAGATGTGGTaGGGAGGGGACTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPYKKMW*GGDCSQ
Trigger: TTGGGAGCAGTCCCCTCCGCACCACATCTTCTTATA...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTTATAAGAAGATGTGGTaGGGAGGGGACTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTYKKMW*GGDCSQ
Trigger: TTGGGAGCAGTCCCCTCCGCACCACATCTTCTTATA...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCCCTGGGTTGCTACAGTaGAGTCACCAAGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSPGLLQ*SHQAEF
Trigger: AAACTCAGCTTGGTGACTGCACTGTAGCAACCCAGG...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTCCTGGGTTGCTACAGTaGAGTCACCAAGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLPGLLQ*SHQAEF
Trigger: AAACTCAGCTTGGTGACTGCACTGTAGCAACCCAGG...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTCCTGGGTTGCTACAGTaGAGTCACCAAGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPPGLLQ*SHQAEF
Trigger: AAACTCAGCTTGGTGACTGCACTGTAGCAACCCAGG...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGATTCCTCCTCCCTCATaGTCACCAACTATAAGTAGG +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQIPPPS*SPTISR
Trigger: CCTACTTATAGTTGGTGAGCATGAGGGAGGAGGAAT...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTATTCCTCCTCCCTCATaGTCACCAACTATAAGTAGG +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSIPPPS*SPTISR
Trigger: CCTACTTATAGTTGGTGAGCATGAGGGAGGAGGAAT...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACCAGAGAAAAACCTTCTaGTTCAGTGGGCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADQRKTF*FSGPLQ
Trigger: CTGCAGGGGCCCACTGAAGCAGAAGGTTTTTCTCTG...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCCAGCAAATGGTGAGCTaGCTTTTAAACACTACTTTA +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSQQMVS*LLNTTL
Trigger: TAAAGTAGTGTTTAAAAGGCAGCTCACCATTTGCTG...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGCAAAGCTCATCAATaGCAGTATCTCATAATAGAC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSGKAHQ*QYLIID
Trigger: GTCTATTATGAGATACTGGCATTGATGAGCTTTGCC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGGAGCATTCAATTTGCTaGTGGCATACAAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLEHSIC*WHTKEA
Trigger: AGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTC...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATGCAGGCAATGCCCCTaGTCATTCAGCACTACAGTA +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWACRQCP*SFSTTV
Trigger: TACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCA...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTTGCAGGCAATGCCCCTaGTCATTCAGCACTACAGTA +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLCRQCP*SFSTTV
Trigger: TACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCA...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAGGGTCCACGGGGGCTTaGTGGTCCATCCTAAGGCAA +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRGSTGA*WSILRQ
Trigger: TTGCCTTAGGATGGACCAGCAAGCCCCCGTGGACCC...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGATGTGCAGGAAGGACTaGCACATGGGAAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMMCRKD*HMGKGK
Trigger: TTTTCCTTTTCCCATGTGGCAGTCCTTCCTGCACAT...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGCTTATTGGACTGGGGTaGAGGAATGGGATTTGGTTT +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKLIGLG*RNGIWF
Trigger: AAACCAAATCCCATTCCTGCACCCCAGTCCAATAAG...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTCTTATTGGACTGGGGTaGAGGAATGGGATTTGGTTT +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSLIGLG*RNGIWF
Trigger: AAACCAAATCCCATTCCTGCACCCCAGTCCAATAAG...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAACCACAGTCCTGTTTTaGAGCATGAGAGGGGGATGT +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWATTVLF*SMRGGC
Trigger: ACATCCCCCTCTCATGCTGCAAAACAGGACTGTGGT...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGTTAGGCGGGAAAGGATaGTCACTTCAATCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKLGGKG*SLQSVL
Trigger: AAGGACAGATTGAAGTGAGCATCCTTTCCCGCCTAA...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGTGGAAGCTAGAACACTaGCCTGATTGTGCACTGTAT +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKWKLEH*PDCALY
Trigger: ATACAGTGCACAATCAGGCCAGTGTTCTAGCTTCCA...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTTGGAAGCTAGAACACTaGCCTGATTGTGCACTGTAT +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSWKLEH*PDCALY
Trigger: ATACAGTGCACAATCAGGCCAGTGTTCTAGCTTCCA...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCGAGTGCAAATCTGGGTaGTTCCAGGCTGCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGECKSG*FQAARK
Trigger: TTTCCTTGCAGCCTGGAACCACCCAGATTTGCACTC...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCAGTTTGAAACGCAGGTaGACATACTATAAATGTCTG +
Preference number: 4 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSSLKRR*TYYKCL
Trigger: CAGACATTTATAGTATGTCCACCTGCGTTTCAAACT...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGTTGTCTGACAACATaGGCAACACCAACATTCAGA +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVICCLTT*ATPTFR
Trigger: TCTGAATGTTGGTGTTGCCCATGTTGTCAGACAACA...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTAGGGCTGGGAGTATCTaGAATGATGATGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLRAGSI*NDDGLM
Trigger: CATCAGCCCATCATCATTCCAGATACTCCCAGCCCT...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGTCAGTCCAGAGCTACTaGGCTTGTATTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKSVQSY*ACICCP
Trigger: AGGACAACAAATACAAGCCCAGTAGCTCTGGACTGA...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGGATGACATTAGACCTTaGCTTCAGTCCAGAGCTACT +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMDDIRP*LQSRAT
Trigger: AGTAGCTCTGGACTGAAGCCAAGGTCTAATGTCATC...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTGATGACATTAGACCTTaGCTTCAGTCCAGAGCTACT +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSDDIRP*LQSRAT
Trigger: AGTAGCTCTGGACTGAAGCCAAGGTCTAATGTCATC...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGAGAAGAGTCAGAGTCTaGAGAATCATTGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLRRVRV*RIIDSD
Trigger: GTCACTGTCAATGATTCTCCAGACTCTGACTCTTCT...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACAGGAGACCTGAGGCCTaGGTTGCTACAGTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYRRPEA*VATVQS
Trigger: TGACTGCACTGTAGCAACCCAGGCCTCAGGTCTCCT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGGATGACTGCTGGTTCTaGCTAAGATTGAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMDDCWF*LRLSGC
Trigger: ACAACCACTCAATCTTAGCCAGAACCAGCAGTCATC...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACCAGATGAGCCTGGCTTaGCAGGTGAGCAGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHQMSLA*QVSRGR
Trigger: CCGGCCCCTGCTCACCTGCCAAGCCAGGCTCATCTG...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACACACTGACAGGGACCTaGTGCACCAAAGTGCTAGGG +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYTLTGT*CTKVLG
Trigger: CCCTAGCACTTTGGTGCACCAGGTCCCTGTCAGTGT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCAATGTAGGATTGGGTaGCAAACTGGTGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMQCRIG*QTGVGT
Trigger: AGTACCAACACCAGTTTGCCACCCAATCCTACATTG...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTGCAGAACAAGTTGCTaGCTAAGAAATTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPCRTSC*LRNFKR
Trigger: CCTCTTGAAATTTCTTAGCCAGCAACTTGTTCTGCA...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAAACCTTCTGCTTCAGTaGGCCCCTGCAGAACAAGTT +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWANLLLQ*APAEQV
Trigger: AACTTGTTCTGCAGGGGCCCACTGAAGCAGAAGGTT...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCTCCCCAAATCCTTTATaGGCAGGAATGTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGSPNPL*AGMSPS
Trigger: GGATGGGGACATTCCTGCCCATAAAGGATTTGGGGA...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTACTGGGGTGCAGGAATaGGATTTGGTTTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSTGVQE*DLVFFP
Trigger: AGGAAAGAAAACCAAATCCCATTCCTGCACCCCAGT...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGACTGGGGTGCAGGAATaGGATTTGGTTTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMTGVQE*DLVFFP
Trigger: AGGAAAGAAAACCAAATCCCATTCCTGCACCCCAGT...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAGTGGTATCTGCTTATTaGACTGGGGTGCAGGAATGG +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPVVSAY*TGVQEW
Trigger: CCATTCCTGCACCCCAGTCCAATAAGCAGATACCAC...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGACTCCTATCTTAAGTaGTATCTGCTTATTGGACTG +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLDSYLK*YLLIGL
Trigger: CAGTCCAATAAGCAGATACCACTTAAGATAGGAGTC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACTTGCCCTTGTGTGGCTaGGAGGGTTTTGCTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYLPLCG*EGFAVG
Trigger: ACCCACAGCAAAACCCTCCCAGCCACACAAGGGCAA...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACCTCCACTGCAGGAGCTaGGAGGAGGAGGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHLHCRS*EEEALV
Trigger: GACCAGGGCCTCCTCCTCCCAGCTCCTGCAGTGGAG...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAGGGTCTGGCTGCTTTaGAAGGTTGATGTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSRVWLL*KVDVAA
Trigger: TGCTGCTACATCAACCTTCCAAAGCAGCCAGACCCT...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTAGGGTCTGGCTGCTTTaGAAGGTTGATGTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPRVWLL*KVDVAA
Trigger: TGCTGCTACATCAACCTTCCAAAGCAGCCAGACCCT...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAGGGTCTGGCTGCTTTaGAAGGTTGATGTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPRVWLL*KVDVAA
Trigger: TGCTGCTACATCAACCTTCCAAAGCAGCCAGACCCT...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAATCCCCTTCTCCGCTaGAACTGCTACTCTTTGTGG +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSNPLLR*NCYSLW
Trigger: CCACAAAGAGTAGCAGTTCCAGCGGAGAAGGGGATT...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAATCTGTCCTTGTCTaGCATAGGAGGGGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGQSVLV*HRRGGS
Trigger: AGAACCACCCCTCCTATGCCAGACAAGGACAGATTG...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATCTGATGTACTTGAGTaGCAGTGGGCTAAATTTGTT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSSDVLE*QWAKFV
Trigger: AACAAATTTAGCCCACTGCCACTCAAGTACATCAGA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAGGCTTAAGGTCAGCGTaGATCAGACCAAGACTCTTG +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPGLRSA*IRPRLL
Trigger: CAAGAGTCTTGGTCTGATCCACGCTGACCTTAAGCC...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTGGCTTAAGGTCAGCGTaGATCAGACCAAGACTCTTG +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPGLRSA*IRPRLL
Trigger: CAAGAGTCTTGGTCTGATCCACGCTGACCTTAAGCC...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGGAAGCTAGAACACTaGCTGTATCATACATGTGAA +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSWKLEH*LYHTCE
Trigger: TTCACATGTATGATACAGCCAGTGTTCTAGCTTCCA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000369561.8
CDS-3UTR TCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCAAGCCTTGTGTTTGTaGAATATAACGAATCTGATC +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLQALCL*NITNLI
Trigger: GATCAGATTCGTTATATTTCACAAACACAAGGCTTG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACAAGCCTTGTGTTTGTaGAATATAACGAATCTGATC +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSQALCL*NITNLI
Trigger: GATCAGATTCGTTATATTTCACAAACACAAGGCTTG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGCTTCCGAGCTTCTTTTaGTTTTATTCCAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKLPSFF*FYSSLQ
Trigger: CTGGAGACTGGAATAAAATCAAAAGAAGCTCGGAAG...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATGGAATGGATCTGTCTaGGTGCAAATCTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAWNGSV*VQIWVV
Trigger: AACCACCCAGATTTGCACTCAGACAGATCCATTCCA...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTTGGAATGGATCTGTCTaGGTGCAAATCTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLWNGSV*VQIWVV
Trigger: AACCACCCAGATTTGCACTCAGACAGATCCATTCCA...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGGGCAGGAGAATTTGCTaGGTCCCTCCAGGCCACGCC +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKGRRIC*VPPGHA
Trigger: GGCGTGGCCTGGAGGGACTCAGCAAATTCTCCTGCC...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTCAACTGTTGCCAAGTTaGAGGCAGGAGAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTQLLPS*RQENLL
Trigger: CAGCAAATTCTCCTGCCTTCAACTTGGCAACAGTTG...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCACAACTGTTGCCAAGTTaGAGGCAGGAGAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPQLLPS*RQENLL
Trigger: CAGCAAATTCTCCTGCCTTCAACTTGGCAACAGTTG...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCATCCAGTGTAAATTGTTaGGCCTCGGGAAGACCCAAT +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPSSVNC*ASGRPN
Trigger: ATTGGGTCTTCCCGAGGCTCAACAATTTACACTGGA...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACCAATGCAGTCAACACTaGGACAGGTTCCCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYQCSQH*DRFPQR
Trigger: TCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTG...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTATCAGCATTTTTCCTaGCCAGCAATCACAATAACA +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPYQHFS*PAITIT
Trigger: TGTTATTGTGATTGCTGGTCAGGAAAAATGCTGATA...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTTGTTGGCAGGGAAACTaGGAACAATGCATTACACAA +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSCWQGN*EQCITQ
Trigger: TTGTGTAATGCATTGTTCTCAGTTTCCCTGCCAACA...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGTGTTGGCAGGGAAACTaGGAACAATGCATTACACAA +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMCWQGN*EQCITQ
Trigger: TTGTGTAATGCATTGTTCTCAGTTTCCCTGCCAACA...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCGGGAAAATGCTTCTGTaGGAACTCAGCCGAGAATCC +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFGKMLL*ELSRES
Trigger: GGATTCTCGGCTGAGTTCTCACAGAAGCATTTTCCC...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTCCTCAAAAGCCTCAATaGCTCAACAGGCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLPQKPQ*LNRLWF
Trigger: GAACCAAAGCCTGTTGAGTCATTGAGGCTTTTGAGG...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTGACAATTTCACAGCTTaGAGGGCCCCAAGACTATAC +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPDNFTA*RAPRLY
Trigger: GTATAGTCTTGGGGCCCTTCAAGCTGTGAAATTGTC...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAGACAATTTCACAGCTTaGAGGGCCCCAAGACTATAC +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPDNFTA*RAPRLY
Trigger: GTATAGTCTTGGGGCCCTTCAAGCTGTGAAATTGTC...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCGACAATTTCACAGCTTaGAGGGCCCCAAGACTATAC +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSDNFTA*RAPRLY
Trigger: GTATAGTCTTGGGGCCCTTCAAGCTGTGAAATTGTC...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAGATCCATGCAGGAGCTaGGAGTACAAGGACAATTTC +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWADPCRS*EYKDNF
Trigger: GAAATTGTCCTTGTACTCTCAGCTCCTGCATGGATC...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGAAACTCCAAATACTTTaGCAGCTCCTCGGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKKLQIL*QLLGVQ
Trigger: TTGAACACCGAGGAGCTGTCAAAGTATTTGGAGTTT...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACAGCCTTAAGCTGGTTTaGGGTCAGGTCACTGTGACC +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYSLKLV*GQVTVT
Trigger: GGTCACAGTGACCTGACCTCAAACCAGCTTAAGGCT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACGGCCACTCCTGTCACTaGGAGGCAATTTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADGHSCH*EAISFP
Trigger: AGGAAATGAAATTGCCTCTCAGTGACAGGAGTGGCC...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCGGCCACTCCTGTCACTaGGAGGCAATTTCATTTCCT +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFGHSCH*EAISFP
Trigger: AGGAAATGAAATTGCCTCTCAGTGACAGGAGTGGCC...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCACGTAAGCAGGGATGTTaGAATTTGCTACCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPRKQGC*NLLPGE
Trigger: CTCACCAGGTAGCAAATTTCAACATCCCTGCTTACG...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTGTATTCTCTTCGGTCTaGCTTCTCTGCCAACATGTC +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPVFSSV*LLCQHV
Trigger: GACATGTTGGCAGAGAAGGCAGACCGAAGAGAATAC...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAGTATTCTCTTCGGTCTaGCTTCTCTGCCAACATGTC +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAVFSSV*LLCQHV
Trigger: GACATGTTGGCAGAGAAGGCAGACCGAAGAGAATAC...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATCATGGTTAGATTTGTaGTTGTATTTGGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSSWLDL*LYLGQH
Trigger: ATGTTGCCCCAAATACAAGCACAAATCTAACCATGA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTAGAAAGAGTAGCAGCTaGTGCAGTAGAACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTRKSSS*CSRTGS
Trigger: GCTTCCAGTTCTACTGCAGCAGCTGCTACTCTTTCT...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACTGCAAGGAAACACCCTaGTGGGCAACTCCAGGAACT +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYCKETP*WATPGT
Trigger: AGTTCCTGGAGTTGCCCAGCAGGGTGTTTCCTTGCA...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGCTGAGCAGCTGGTaGCTGGGGTACAATCGGTAC +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRWLSSW*LGYNRY
Trigger: GTACCGATTGTACCCCAGGCACCAGCTGCTCAGCCA...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAGAGACTGGAGCTGACTaGTTATTCTTCTTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPETGAD*LFFFEG
Trigger: CCCTTCGAAGAAGAATAAGCAGTCAGCTCCAGTCTC...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTGAGACTGGAGCTGACTaGTTATTCTTCTTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLETGAD*LFFFEG
Trigger: CCCTTCGAAGAAGAATAAGCAGTCAGCTCCAGTCTC...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACAAACGGATCCACTATTaGCTCGGAGAGCACTCAGGG +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYKRIHY*LGEHSG
Trigger: CCCTGAGTGCTCTCCGAGGCAATAGTGGATCCGTTT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACCAGCATCCAGATGACTaGCCACTCACTGAAGCGACT +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYQHPDD*PLTEAT
Trigger: AGTCGCTTCAGTGAGTGGGCAGTCATCTGGATGCTG...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAGGAGCCGCCGATGACTaGTGGTTCTGGCTAAGATTG +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRGAADD*WFWLRL
Trigger: CAATCTTAGCCAGAACCAGCAGTCATCGGCGGCTCC...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCTGCAGGCAATGCCCCTaGTCATTCAGCACTACAGTA +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFCRQCP*SFSTTV
Trigger: TACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCA...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACTCTCCTTGCAGGCAATaGCCCTGCTCATTCAGCACT +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYSPCRQ*PCSFST
Trigger: AGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGA...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTCACCAGACACACCTGTaGAAAACAATTCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLHQTHL*KTIPRV
Trigger: GACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTG...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAGGGTCCACGGGGGCTTaGTGGTCCATCCTAAGGCAA +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKGSTGA*WSILRQ
Trigger: TTGCCTTAGGATGGACCAGCAAGCCCCCGTGGACCC...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCGCCACATGGGGAAAATaGTTCTGTGAGAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFATWGK*FCENSA
Trigger: GGCTGAGTTCTCACAGAAGCATTTTCCCCATGTGGC...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTGGAATGTCAACTATGTaGAGGAAGGACTGCCACATG +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPGMSTM*RKDCHM
Trigger: CATGTGGCAGTCCTTCCTGCACATAGTTGACATTCC...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAGGAATGTCAACTATGTaGAGGAAGGACTGCCACATG +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAGMSTM*RKDCHM
Trigger: CATGTGGCAGTCCTTCCTGCACATAGTTGACATTCC...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAGCTGTACGGACTACCTaGCCCATCTTGGAAGCCCTT +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRAVRTT*PILEAL
Trigger: AAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGC...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGATCTTAAGTGGTATCTaGTTATTGGACTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMILSGI*LLDWGA
Trigger: TGCACCCCAGTCCAATAAGCAGATACCACTTAAGAT...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGACAGGTGGATTTTTATaGTGGAAAATCGGAAATGCC +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLTGGFL*WKIGNA
Trigger: GGCATTTCCGATTTTCCAGCATAAAAATCCACCTGT...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAACACATTACTGTGCTTaGCTGGCTAAGGGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPTHYCA*LAKGSQ
Trigger: TTGACTGCCCTTAGCCAGGCAAGCACAGTAATGTGT...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGTGGCTGGGAGGGTTTTaGTGTGGGTATAATATTTGT +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKWLGGF*CGYNIC
Trigger: ACAAATATTATACCCACAGCAAAACCCTCCCAGCCA...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTTGGCTGGGAGGGTTTTaGTGTGGGTATAATATTTGT +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSWLGGF*CGYNIC
Trigger: ACAAATATTATACCCACAGCAAAACCCTCCCAGCCA...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAAATGTCTGTTGGAATaGATCTGTCTGAGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSKCLLE*ICLSAN
Trigger: ATTTGCACTCAGACAGATCCATTCCAACAGACATTT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAATGTCTGTTGGAATaGATCTGTCTGAGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLKCLLE*ICLSAN
Trigger: ATTTGCACTCAGACAGATCCATTCCAACAGACATTT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCAGTTTGAAACGCAGGTaGACATACTATAAATGTCTG +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPSLKRR*TYYKCL
Trigger: CAGACATTTATAGTATGTCCACCTGCGTTTCAAACT...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAGTTTGAAACGCAGGTaGACATACTATAAATGTCTG +
Preference number: 4 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSSLKRR*TYYKCL
Trigger: CAGACATTTATAGTATGTCCACCTGCGTTTCAAACT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTATCATTGCTGTGGGCTaGACAGAGTTGTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTIIAVG*TELCRA
Trigger: AGCTCTACACAACTCTGTCCAGCCCACAGCAATGAT...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCATCATTGCTGTGGGCTaGACAGAGTTGTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSIIAVG*TELCRA
Trigger: AGCTCTACACAACTCTGTCCAGCCCACAGCAATGAT...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCACTGGAATCATTGCTGTaGGCTGGACAGAGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWALESLL*AGQSCV
Trigger: TACACAACTCTGTCCAGCCCACAGCAATGATTCCAG...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCACTGGAATCATTGCTGTaGGCTGGACAGAGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPLESLL*AGQSCV
Trigger: TACACAACTCTGTCCAGCCCACAGCAATGATTCCAG...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTCTGGAATCATTGCTGTaGGCTGGACAGAGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLLESLL*AGQSCV
Trigger: TACACAACTCTGTCCAGCCCACAGCAATGATTCCAG...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCGTGGCCAATGTCACATaGTTAGTCAGCAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFVANVT*LVSKDG
Trigger: GCCATCCTTGCTGACTAACCATGTGACATTGGCCAC...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTCATCTAGAGAGGACTTaGAAGAGACTGGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTHLERT*KRLELT
Trigger: AGTCAGCTCCAGTCTCTTCCAAGTCCTCTCTAGATG...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCACATCTAGAGAGGACTTaGAAGAGACTGGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAHLERT*KRLELT
Trigger: AGTCAGCTCCAGTCTCTTCCAAGTCCTCTCTAGATG...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCATCTAGAGAGGACTTaGAAGAGACTGGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGHLERT*KRLELT
Trigger: AGTCAGCTCCAGTCTCTTCCAAGTCCTCTCTAGATG...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTAATTATAAGAAGATGTaGTGCGGAGGGGACTGCTCC +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLNYKKM*CGGDCS
Trigger: GGAGCAGTCCCCTCCGCACCACATCTTCTTATAATT...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTCACTCAGGGTATCAGTaGAATAAGGGCTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTHSGYQ*NKGCSK
Trigger: CTTTGAGCAGCCCTTATTCCACTGATACCCTGAGTG...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCACTCAGGGTATCAGTaGAATAAGGGCTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGHSGYQ*NKGCSK
Trigger: CTTTGAGCAGCCCTTATTCCACTGATACCCTGAGTG...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAAGGAGACCTGAGGCCTaGGTTGCTACAGTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRRRPEA*VATVQS
Trigger: TGACTGCACTGTAGCAACCCAGGCCTCAGGTCTCCT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACGCCGCCGATGACTGCTaGTTCTGGCTAAGATTGAGT +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYAADDC*FWLRLS
Trigger: ACTCAATCTTAGCCAGAACCAGCAGTCATCGGCGGC...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTCCCCAAATCCTTTATaGGCAGGAATGTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADSPNPL*AGMSPS
Trigger: GGATGGGGACATTCCTGCCCATAAAGGATTTGGGGA...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCGTGGTATCTGCTTATTaGACTGGGGTGCAGGAATGG +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFVVSAY*TGVQEW
Trigger: CCATTCCTGCACCCCAGTCCAATAAGCAGATACCAC...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGAAAGCAGGCTCAGAATaGCCAGAACTGTTTGAAATG +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQKAGSE*PELFEM
Trigger: CATTTCAAACAGTTCTGGCCATTCTGAGCCTGCTTT...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGTCTAGTGGAGGACAATaGATGAGCAATCACAAAAGC +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQSSGGQ*MSNHKS
Trigger: GCTTTTGTGATTGCTCATCCATTGTCCTCCACTAGA...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCATTACTGTGCTTGCCTaGCTAAGGGCAGTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGITVLA*LRAVKL
Trigger: AAGCTTGACTGCCCTTAGCCAGGCAAGCACAGTAAT...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACCAATCTGTCCTTGTCTaGCATAGGAGGGGTGGTTCT +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADQSVLV*HRRGGS
Trigger: AGAACCACCCCTCCTATGCCAGACAAGGACAGATTG...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGTCTGATGTACTTGAGTaGCAGTGGGCTAAATTTGTT +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLSDVLE*QWAKFV
Trigger: AACAAATTTAGCCCACTGCCACTCAAGTACATCAGA...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTCACCTGCTGCAAGATTaGTCTGATGTACTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPHLLQD*SDVLEW
Trigger: CCACTCAAGTACATCAGACCAATCTTGCAGCAGGTG...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR CAA 72 bp AAAACCTTCTGCTTCAGTGGGCCCCTGCAGAACAAGTaGCTGGCTAAGAAATTTCAAGAGGGTAAAGGAGGA +
Preference number: 4 (lower is better)
Translates to: KTFCFSGPLQNK*LAKKFQEGKGG
Trigger: TCCTCCTTTACCCTCTTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGGGCCCACTGAAGCAGAAGGTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATATCACACAGCCCAGTaGCCACATATCAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAYHTAQ*PHINSF
Trigger: GAAGCTATTGATATGTGGTCACTGGGCTGTGTGATA...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCTATCACACAGCCCAGTaGCCACATATCAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSYHTAQ*PHINSF
Trigger: GAAGCTATTGATATGTGGTCACTGGGCTGTGTGATA...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGCAAGCCTTGTGTTTGTaGAATATAACGAATCTGATC +
Preference number: 4 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLQALCL*NITNLI
Trigger: GATCAGATTCGTTATATTTCACAAACACAAGGCTTG...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCTGCACTGTATTGAGCTaGTTGCTGAAGCTCATGGTT +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSCTVLS*LLKLMV
Trigger: AACCATGAGCTTCAGCAATCAGCTCAATACAGTGCA...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTTGCACTGTATTGAGCTaGTTGCTGAAGCTCATGGTT +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTCTVLS*LLKLMV
Trigger: AACCATGAGCTTCAGCAATCAGCTCAATACAGTGCA...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATGCACTGTATTGAGCTaGTTGCTGAAGCTCATGGTT +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWACTVLS*LLKLMV
Trigger: AACCATGAGCTTCAGCAATCAGCTCAATACAGTGCA...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCTGGAATGGATCTGTCTaGGTGCAAATCTGGGTGGTT +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFWNGSV*VQIWVV
Trigger: AACCACCCAGATTTGCACTCAGACAGATCCATTCCA...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAACCGCATACTGCGGTGTaGTGGTGGCTACTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKPHTAV*WWLLEG
Trigger: ACCCTCAAGTAGCCACCATCACACCGCAGTATGCGG...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
CDS-3UTR TCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAACTGTTGCCAAGTTaGAGGCAGGAGAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFQLLPS*RQENLL
Trigger: CAGCAAATTCTCCTGCCTTCAACTTGGCAACAGTTG...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACCAACTGTTGCCAAGTTaGAGGCAGGAGAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADQLLPS*RQENLL
Trigger: CAGCAAATTCTCCTGCCTTCAACTTGGCAACAGTTG...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGACTGTACTGGTTGCCATaGGAGTGGGCATTCCTCCAG +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRLYWLP*EWAFLQ
Trigger: CTGGAGGAATGCCCACTCTCATGGCAACCAGTACAG...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACGGAAGAGACTGGAGCTaGCTGCTTATTCTTCTTCGA +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADGRDWS*LLILLR
Trigger: TCGAAGAAGAATAAGCAGTCAGCTCCAGTCTCTTCC...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAGATACCCTGTGGGGGTaGTACAGCATCCAGATGACT +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRDTLWG*YSIQMT
Trigger: AGTCATCTGGATGCTGTATCACCCCCACAGGGTATC...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACGGTTGGAGCCGCCGATaGCTGCTGGTTCTGGCTAAG +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHGWSRR*LLVLAK
Trigger: CTTAGCCAGAACCAGCAGTCATCGGCGGCTCCAACC...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTCCAGTGTAAATTGTTaGGCCTCGGGAAGACCCAAT +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADSSVNC*ASGRPN
Trigger: ATTGGGTCTTCCCGAGGCTCAACAATTTACACTGGA...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACGGGAAAATGCTTCTGTaGGAACTCAGCCGAGAATCC +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYGKMLL*ELSRES
Trigger: GGATTCTCGGCTGAGTTCTCACAGAAGCATTTTCCC...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACCCTCAAAAGCCTCAATaGCTCAACAGGCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADPQKPQ*LNRLWF
Trigger: GAACCAAAGCCTGTTGAGTCATTGAGGCTTTTGAGG...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGACCAGTACCTTCTACTTaGCCCAGATCCATGCAGGAG +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRPVPST*PRSMQE
Trigger: CTCCTGCATGGATCTGGGTCAAGTAGAAGGTACTGG...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAGCTGACCAGGCTCCATaGAATCTCCCATCTCCATCC +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRADQAP*NLPSPS
Trigger: GGATGGAGATGGGAGATTTCATGGAGCCTGGTCAGC...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGAATCTAAAGCCACAGTaGGCACATACATACACATTC +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMNLKPQ*AHTYTF
Trigger: GAATGTGTATGTATGTGCTCACTGTGGCTTTAGATT...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGACCAGAGTGGCTACACTaGACCCTTCTCCGCTTCTTC +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRPEWLH*TLLRFF
Trigger: GAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGG...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCTTAAAAACTCTGGAGTaGCCAAGTGTCCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSLKTLE*PSVPMS
Trigger: GCTCATAGGGACACTTGGTCACTCCAGAGTTTTTAA...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCTTAAAAACTCTGGAGTaGCCAAGTGTCCCTATGAGC +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGLKTLE*PSVPMS
Trigger: GCTCATAGGGACACTTGGTCACTCCAGAGTTTTTAA...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGCTGAAAGCACTCGTATaGACGGACAAAATTATACTC +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQLKALV*TDKIIL
Trigger: GAGTATAATTTTGTCCGTTCATACGAGTGCTTTCAG...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACTCAGACCAAGACTCTTaGGCTTCATCAAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYSDQDS*ASSRLW
Trigger: CCACAGCCTTGATGAAGCTCAAGAGTCTTGGTCTGA...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCAGAAAGAGTAGCAGCTaGTGCAGTAGAACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFRKSSS*CSRTGS
Trigger: GCTTCCAGTTCTACTGCAGCAGCTGCTACTCTTTCT...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCATGGATCTGTCTGAGTaGAAATCTGGGTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFMDLSE*KSGWFQ
Trigger: CTGGAACCACCCAGATTTGCACTCAGACAGATCCAT...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACGTCAGCAAGGATGGCTaGTGCATGATAGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYVSKDG*CMIVLY
Trigger: GTACAGCACTATCATGCAGCAGCCATCCTTGCTGAC...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAATCGAGTGTAGCGGGCTaGCATGCTGGAAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKSSVAG*HAGRCR
Trigger: CCTACACCTTCCAGCATGGCAGCCCGCTACACTCGA...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCATTCCTCCTCCCTCATaGTCACCAACTATAAGTAGG +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSIPPPS*SPTISR
Trigger: CCTACTTATAGTTGGTGAGCATGAGGGAGGAGGAAT...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAGCTTCAGTGGGCCCCTaGAGAACAAGTTGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRASVGP*RTSCWL
Trigger: TAGCCAGCAACTTGTTCTGCAGGGGCCCACTGAAGC...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCCTCTTCCTTGGTAACTaGAGAAGATGGGCATCTGAA +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSLFLGN*RRWASE
Trigger: TTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAG...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTCTCTTCCTTGGTAACTaGAGAAGATGGGCATCTGAA +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTLFLGN*RRWASE
Trigger: TTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAG...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCACCAGACACACCTGTaGAAAACAATTCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFHQTHL*KTIPRV
Trigger: GACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTG...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCATTGACTCCTCTCACCTaGTTCCTGAATTCTCACAGA +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPLTPLT*FLNSHR
Trigger: TCTGTGAGAATTCAGGAAGCAGGTGAGAGGAGTCAA...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAATGTGCAGGAAGGACTaGCACATGGGAAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAMCRKD*HMGKGK
Trigger: TTTTCCTTTTCCCATGTGGCAGTCCTTCCTGCACAT...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAAAGAAAATCAGAATGTaGTTGGCAAAAAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIKKIRM*LAKRRH
Trigger: GTGTCTCCTTTTTGCCAAGCACATTCTGATTTTCTT...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTGGAAGAAGTTGGAAATaGCAAGTTCTGAGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPGRSWK*QVLRED
Trigger: GTCCTCTCTCAGAACTTGGCATTTCCAACTTCTTCC...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAGGAAGAAGTTGGAAATaGCAAGTTCTGAGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAGRSWK*QVLRED
Trigger: GTCCTCTCTCAGAACTTGGCATTTCCAACTTCTTCC...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTTCTGCACACTACCGTTaGTGTCAACTTCCTCACTTT +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLSAHYR*CQLPHF
Trigger: AAAGTGAGGAAGTTGACAGCAACGGTAGTGTGCAGA...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTTTAGGCGGGAAAGGATaGTCACTTCAATCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTLGGKG*SLQSVL
Trigger: AAGGACAGATTGAAGTGAGCATCCTTTCCCGCCTAA...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAAAGGCTGTGGCCACCTaGTGCAAGATTGGTCTGATG +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRKAVAT*CKIGLM
Trigger: CATCAGACCAATCTTGCAGCAGGTGGCCACAGCCTT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGACCGCACTGCAGACTCTaGGGTGATTTAAAGGTGCCT +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRPHCRL*GDLKVP
Trigger: AGGCACCTTTAAATCACCGCAGAGTCTGCAGTGCGG...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426820.7
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAACATGATTGCTATGTaGAAAATCCAAAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLNMIAM*KIQKVS
Trigger: ACTCACCTTTTGGATTTTCCACATAGCAATCATGTT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTTGGAAGCTAGAACACTaGCCTGATTGTGCACTGTAT +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLWKLEH*PDCALY
Trigger: ATACAGTGCACAATCAGGCCAGTGTTCTAGCTTCCA...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACGAGTGCAAATCTGGGTaGTTCCAGGCTGCAAGGAAA +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYECKSG*FQAARK
Trigger: TTTCCTTGCAGCCTGGAACCACCCAGATTTGCACTC...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACCTGGAATCATTGCTGTaGGCTGGACAGAGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADLESLL*AGQSCV
Trigger: TACACAACTCTGTCCAGCCCACAGCAATGATTCCAG...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAACTCCCCATGGCCTCTaGAATCATTGCTGTGGGCTG +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRTPHGL*NHCCGL
Trigger: CAGCCCACAGCAATGATTCCAGAGGCCATGGGGAGT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACAGGGCTGGGAGTATCTaGAATGATGATGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYRAGSI*NDDGLM
Trigger: CATCAGCCCATCATCATTCCAGATACTCCCAGCCCT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTTCAGTCCAGAGCTACTaGGCTTGTATTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLSVQSY*ACICCP
Trigger: AGGACAACAAATACAAGCCCAGTAGCTCTGGACTGA...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCATCAGTCCAGAGCTACTaGGCTTGTATTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPSVQSY*ACICCP
Trigger: AGGACAACAAATACAAGCCCAGTAGCTCTGGACTGA...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACCACTCAGGGTATCAGTaGAATAAGGGCTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADHSGYQ*NKGCSK
Trigger: CTTTGAGCAGCCCTTATTCCACTGATACCCTGAGTG...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAAAGCTGAGTTTTCAGTaGAGGCACAATGATAGTGCG +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAKLSFQ*RHNDSA
Trigger: CGCACTATCATTGTGCCTCCACTGAAAACTCAGCTT...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTAAGCTGAGTTTTCAGTaGAGGCACAATGATAGTGCG +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPKLSFQ*RHNDSA
Trigger: CGCACTATCATTGTGCCTCCACTGAAAACTCAGCTT...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAAGGAGACCTGAGGCCTaGGTTGCTACAGTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRRRPEA*VATVQS
Trigger: TGACTGCACTGTAGCAACCCAGGCCTCAGGTCTCCT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCGATGACTGCTGGTTCTaGCTAAGATTGAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGDDCWF*LRLSGC
Trigger: ACAACCACTCAATCTTAGCCAGAACCAGCAGTCATC...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTGATGACTGCTGGTTCTaGCTAAGATTGAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLDDCWF*LRLSGC
Trigger: ACAACCACTCAATCTTAGCCAGAACCAGCAGTCATC...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTGGTAACTGCAGAAGATaGGCATCTGAACTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTGNCRR*ASELFQ
Trigger: TTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACC...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTGGTAACTGCAGAAGATaGGCATCTGAACTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPGNCRR*ASELFQ
Trigger: TTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACC...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAACTGGGGTGCAGGAATaGGATTTGGTTTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPTGVQE*DLVFFP
Trigger: AGGAAAGAAAACCAAATCCCATTCCTGCACCCCAGT...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCAACAATACAAGCTCTTaGTATTATCCTTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPNNTSS*YYPFLW
Trigger: CCACAGAAAAGGATAATACCAAGAGCTTGTATTGTT...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGGTGGATTTTTATGCTaGAAAATCGGAAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKGGFLC*KIGNAS
Trigger: ACTGGCATTTCCGATTTTCCAGCATAAAAATCCACC...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGGTGGATTTTTATGCTaGAAAATCGGAAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQGGFLC*KIGNAS
Trigger: ACTGGCATTTCCGATTTTCCAGCATAAAAATCCACC...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCACTTAAAGCCTTAAGCTaGTTTGAGGTCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWALKALS*FEVRSL
Trigger: CAGTGACCTGACCTCAAACCAGCTTAAGGCTTTAAG...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCACTTAAAGCCTTAAGCTaGTTTGAGGTCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPLKALS*FEVRSL
Trigger: CAGTGACCTGACCTCAAACCAGCTTAAGGCTTTAAG...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCAATAATATCACCTCCTaGGAGCTATTAAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPNNITS*ELLKTL
Trigger: CAGAGTTTTTAATAGCTCCCAGGAGGTGATATTATT...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGCTTGCCCTTGTGTaGCTGGGAGGGTTTTGCTGT +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRWLALV*LGGFCC
Trigger: ACAGCAAAACCCTCCCAGCCACACAAGGGCAAGCCA...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTCCACATTTTTGATATaGCTCAAGCAAAGAAACGTT +
Preference number: 4 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLSTFLI*LKQRNV
Trigger: AACGTTTCTTTGCTTGAGCCATATCAAAAATGTGGA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGTCTGATGTACTTGAGTaGCAGTGGGCTAAATTTGTT +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMSDVLE*QWAKFV
Trigger: AACAAATTTAGCCCACTGCCACTCAAGTACATCAGA...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAGCTTCATCAAGGCTGTaGCCACCTGCTGCAAGATTG +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRASSRL*PPAARL
Trigger: CAATCTTGCAGCAGGTGGCCACAGCCTTGATGAAGC...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR CAA 72 bp GCCCTTACTCCTTACAATGAAGAAACTCCAAATACTTaGACAGCTCCTCGGTGTTCAACCTGGTACAGAGCT +
Preference number: 4 (lower is better)
Translates to: ALTPYNEETPNT*TAPRCSTWYRA
Trigger: AGCTCTGTACCAGGTTGAACACCGAGGAGCTGTCAAAGTATTTGGAGTTTCTTCATTGTAAGGAGTAAGGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCTTCCGAGCTTCTTTTaGTTTTATTCCAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGLPSFF*FYSSLQ
Trigger: CTGGAGACTGGAATAAAATCAAAAGAAGCTCGGAAG...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTGTAGACATATTCACCTaGGCCATGTCATCTAAGCAA +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTVDIFT*AMSSKQ
Trigger: TTGCTTAGATGACATGGCTCAGGTGAATATGTCTAC...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGATACAGCTTCCCTGCGTaGGAACTCCTGACTGAATCT +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRYSFPA*ELLTES
Trigger: AGATTCAGTCAGGAGTTCTCACGCAGGGAAGCTGTA...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
CDS-3UTR TCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGACCAACATTCAGAGGCTaGGCAGTGGCCAATGTCACA +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRPTFRG*AVANVT
Trigger: TGTGACATTGGCCACTGCTCAGCCTCTGAATGTTGG...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACTCCAGTGTAAATTGTTaGGCCTCGGGAAGACCCAAT +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYSSVNC*ASGRPN
Trigger: ATTGGGTCTTCCCGAGGCTCAACAATTTACACTGGA...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGTATCAGCATTTTTCCTaGCCAGCAATCACAATAACA +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMYQHFS*PAITIT
Trigger: TGTTATTGTGATTGCTGGTCAGGAAAAATGCTGATA...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTTATCAGCATTTTTCCTaGCCAGCAATCACAATAACA +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSYQHFS*PAITIT
Trigger: TGTTATTGTGATTGCTGGTCAGGAAAAATGCTGATA...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGAAACACAGGAGCAATTaGGAGAATCTCAATAGTAAC +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKKHRSN*ENLNSN
Trigger: GTTACTATTGAGATTCTCTCAATTGCTCCTGTGTTT...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGAAACACAGGAGCAATTaGGAGAATCTCAATAGTAAC +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQKHRSN*ENLNSN
Trigger: GTTACTATTGAGATTCTCTCAATTGCTCCTGTGTTT...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTAAACTCCAAATACTTTaGCAGCTCCTCGGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLKLQIL*QLLGVQ
Trigger: TTGAACACCGAGGAGCTGTCAAAGTATTTGGAGTTT...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTAAACTCCAAATACTTTaGCAGCTCCTCGGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTKLQIL*QLLGVQ
Trigger: TTGAACACCGAGGAGCTGTCAAAGTATTTGGAGTTT...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAAGCCTTAAGCTGGTTTaGGGTCAGGTCACTGTGACC +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRSLKLV*GQVTVT
Trigger: GGTCACAGTGACCTGACCTCAAACCAGCTTAAGGCT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACCGTAAGCAGGGATGTTaGAATTTGCTACCTGGTGAG +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYRKQGC*NLLPGE
Trigger: CTCACCAGGTAGCAAATTTCAACATCCCTGCTTACG...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAGCTGCTTTGGAAGGTTaGTGTAGCAGCACTGCCCGA +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKAALEG*CSSTAR
Trigger: TCGGGCAGTGCTGCTACATCAACCTTCCAAAGCAGC...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACGTATTCTCTTCGGTCTaGCTTCTCTGCCAACATGTC +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYVFSSV*LLCQHV
Trigger: GACATGTTGGCAGAGAAGGCAGACCGAAGAGAATAC...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGTCATGGTTAGATTTGTaGTTGTATTTGGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMSWLDL*LYLGQH
Trigger: ATGTTGCCCCAAATACAAGCACAAATCTAACCATGA...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTTCATGGTTAGATTTGTaGTTGTATTTGGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSSWLDL*LYLGQH
Trigger: ATGTTGCCCCAAATACAAGCACAAATCTAACCATGA...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACAGAAAGAGTAGCAGCTaGTGCAGTAGAACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYRKSSS*CSRTGS
Trigger: GCTTCCAGTTCTACTGCAGCAGCTGCTACTCTTTCT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACATGGATCTGTCTGAGTaGAAATCTGGGTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYMDLSE*KSGWFQ
Trigger: CTGGAACCACCCAGATTTGCACTCAGACAGATCCAT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACTGGCTGAGCAGCTGGTaGCTGGGGTACAATCGGTAC +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHWLSSW*LGYNRY
Trigger: GTACCGATTGTACCCCAGGCACCAGCTGCTCAGCCA...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACGAGACTGGAGCTGACTaGTTATTCTTCTTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYETGAD*LFFFEG
Trigger: CCCTTCGAAGAAGAATAAGCAGTCAGCTCCAGTCTC...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGATATAAGAAGATGTGGTaGGGAGGGGACTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRYKKMW*GGDCSQ
Trigger: TTGGGAGCAGTCCCCTCCGCACCACATCTTCTTATA...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGCATCTGCCACAACTCTaGCAGGCCCCTCCAAAACGG +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKHLPQL*QAPPKR
Trigger: CCGTTTTGGAGGGGCCTGGCAGAGTTGTGGCAGATG...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACCATCTGCCACAACTCTaGCAGGCCCCTCCAAAACGG +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHHLPQL*QAPPKR
Trigger: CCGTTTTGGAGGGGCCTGGCAGAGTTGTGGCAGATG...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGACAGCATCCAGATGACTaGCCACTCACTGAAGCGACT +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRQHPDD*PLTEAT
Trigger: AGTCGCTTCAGTGAGTGGGCAGTCATCTGGATGCTG...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAGGAGCCGCCGATGACTaGTGGTTCTGGCTAAGATTG +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKGAADD*WFWLRL
Trigger: CAATCTTAGCCAGAACCAGCAGTCATCGGCGGCTCC...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACTCGAGTGTAGCGGGCTaGCATGCTGGAAGGTGTAGG +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHSSVAG*HAGRCR
Trigger: CCTACACCTTCCAGCATGGCAGCCCGCTACACTCGA...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACATTCCTCCTCCCTCATaGTCACCAACTATAAGTAGG +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADIPPPS*SPTISR
Trigger: CCTACTTATAGTTGGTGAGCATGAGGGAGGAGGAAT...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCACCCTGCAGAACAAGTTaGTGGCTAAGAAATTTCAAG +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPPCRTS*WLRNFK
Trigger: CTTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGG...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTCCCTGCAGAACAAGTTaGTGGCTAAGAAATTTCAAG +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLPCRTS*WLRNFK
Trigger: CTTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGG...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAGCTTCAGTGGGCCCCTaGAGAACAAGTTGCTGGCTA +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKASVGP*RTSCWL
Trigger: TAGCCAGCAACTTGTTCTGCAGGGGCCCACTGAAGC...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACCTCTTCCTTGGTAACTaGAGAAGATGGGCATCTGAA +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADLFLGN*RRWASE
Trigger: TTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAG...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCTCTTCCTTGGTAACTaGAGAAGATGGGCATCTGAA +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFLFLGN*RRWASE
Trigger: TTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAG...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAGAGCATTCAATTTGCTaGTGGCATACAAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPEHSIC*WHTKEA
Trigger: AGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTC...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCGAGCATTCAATTTGCTaGTGGCATACAAAGGAAGCT +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGEHSIC*WHTKEA
Trigger: AGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTC...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACCACCAGACACACCTGTaGAAAACAATTCCAAGGGTC +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYHQTHL*KTIPRV
Trigger: GACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTG...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACATGTGCAGGAAGGACTaGCACATGGGAAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADMCRKD*HMGKGK
Trigger: TTTTCCTTTTCCCATGTGGCAGTCCTTCCTGCACAT...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGAAGAAAATCAGAATGTaGTTGGCAAAAAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQKKIRM*LAKRRH
Trigger: GTGTCTCCTTTTTGCCAAGCACATTCTGATTTTCTT...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCTTATTGGACTGGGGTaGAGGAATGGGATTTGGTTT +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFLIGLG*RNGIWF
Trigger: AAACCAAATCCCATTCCTGCACCCCAGTCCAATAAG...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAATCTTAAGTGGTATCTaGTTATTGGACTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPILSGI*LLDWGA
Trigger: TGCACCCCAGTCCAATAAGCAGATACCACTTAAGAT...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTATCTTAAGTGGTATCTaGTTATTGGACTGGGGTGCA +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTILSGI*LLDWGA
Trigger: TGCACCCCAGTCCAATAAGCAGATACCACTTAAGAT...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAGTGACCCAGGCCAGCTaGTCACTAAATTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKVTQAS*SLNSPG
Trigger: GCCTGGTGAATTTAGTGAGCAGCTGGCCTGGGTCAC...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTTGGCTGGGAGGGTTTTaGTGTGGGTATAATATTTGT +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLWLGGF*CGYNIC
Trigger: ACAAATATTATACCCACAGCAAAACCCTCCCAGCCA...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAAGGGATGTTGAAATTTaGTACCTGGTGAGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWARDVEI*YLVRGV
Trigger: AACTCCTCTCACCAGGTAGCAAATTTCAACATCCCT...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTAGGGATGTTGAAATTTaGTACCTGGTGAGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPRDVEI*YLVRGV
Trigger: AACTCCTCTCACCAGGTAGCAAATTTCAACATCCCT...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCTGTTCTTCTATGATCTaGACACTACCGTTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSCSSMI*TLPLLS
Trigger: TGACAGCAACGGTAGTGTGCAGATCATAGAAGAACA...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTTGTTCTTCTATGATCTaGACACTACCGTTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTCSSMI*TLPLLS
Trigger: TGACAGCAACGGTAGTGTGCAGATCATAGAAGAACA...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACCATCAGCATTTTCACTaGTTAGGCGGGAAAGGATGC +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYHQHFH*LGGKGC
Trigger: GCATCCTTTCCCGCCTAAGCAGTGAAAATGCTGATG...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGAGTTTGAAACGCAGGTaGACATACTATAAATGTCTG +
Preference number: 4 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMSLKRR*TYYKCL
Trigger: CAGACATTTATAGTATGTCCACCTGCGTTTCAAACT...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGAGTTTGAAACGCAGGTaGACATACTATAAATGTCTG +
Preference number: 4 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKSLKRR*TYYKCL
Trigger: CAGACATTTATAGTATGTCCACCTGCGTTTCAAACT...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATGTTGTCTGACAACATaGGCAACACCAACATTCAGA +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWACCLTT*ATPTFR
Trigger: TCTGAATGTTGGTGTTGCCCATGTTGTCAGACAACA...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAGAAGAGTCAGAGTCTaGAGAATCATTGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSRRVRV*RIIDSD
Trigger: GTCACTGTCAATGATTCTCCAGACTCTGACTCTTCT...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTAGAAGAGTCAGAGTCTaGAGAATCATTGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPRRVRV*RIIDSD
Trigger: GTCACTGTCAATGATTCTCCAGACTCTGACTCTTCT...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGACTGGCTAAGATTGAGTaGTTGTGCTGCACTGGTCCC +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRLAKIE*LCCTGP
Trigger: GGGACCAGTGCAGCACAACCACTCAATCTTAGCCAG...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACCAATGTAGGATTGGGTaGCAAACTGGTGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADQCRIG*QTGVGT
Trigger: AGTACCAACACCAGTTTGCCACCCAATCCTACATTG...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCACTTCTCCTCATAGTATaGGGACATGGTAAGCAATAC +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPLLLIV*GHGKQY
Trigger: GTATTGCTTACCATGTCCCCATACTATGAGGAGAAG...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACCTTAAAGCCTTAAGCTaGTTTGAGGTCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADLKALS*FEVRSL
Trigger: CAGTGACCTGACCTCAAACCAGCTTAAGGCTTTAAG...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTAAAGCAGGCTCAGAATaGCCAGAACTGTTTGAAATG +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTKAGSE*PELFEM
Trigger: CATTTCAAACAGTTCTGGCCATTCTGAGCCTGCTTT...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTAAAGCAGGCTCAGAATaGCCAGAACTGTTTGAAATG +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLKAGSE*PELFEM
Trigger: CATTTCAAACAGTTCTGGCCATTCTGAGCCTGCTTT...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTTCTAGTGGAGGACAATaGATGAGCAATCACAAAAGC +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPSSGGQ*MSNHKS
Trigger: GCTTTTGTGATTGCTCATCCATTGTCCTCCACTAGA...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCTTCCGAGCTTCTTTTaGTTTTATTCCAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFLPSFF*FYSSLQ
Trigger: CTGGAGACTGGAATAAAATCAAAAGAAGCTCGGAAG...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCGTAGACATATTCACCTaGGCCATGTCATCTAAGCAA +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFVDIFT*AMSSKQ
Trigger: TTGCTTAGATGACATGGCTCAGGTGAATATGTCTAC...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACGTAGACATATTCACCTaGGCCATGTCATCTAAGCAA +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADVDIFT*AMSSKQ
Trigger: TTGCTTAGATGACATGGCTCAGGTGAATATGTCTAC...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCAAGGGACTCTTGATCTaGCTCACTGTATCATACATG +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFKGLLI*LTVSYM
Trigger: CATGTATGATACAGTGAGTCAGATCAAGAGTCCCTT...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACGTGATGGTGGCTACTTaGGGGTGGAGAGTTGCTACC +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHVMVAT*GWRVAT
Trigger: GGTAGCAACTCTCCACCCTCAAGTAGCCACCATCAC...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000426820.7
CDS-3UTR TCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGACAACTGTTGCCAAGTTaGAGGCAGGAGAATTTGCTG +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRQLLPS*RQENLL
Trigger: CAGCAAATTCTCCTGCCTTCAACTTGGCAACAGTTG...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGTGGGGAGAAAAGATaGGCAATGGAGCTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRCGEKR*AMELVE
Trigger: CTCAACCAGCTCCATTGCTCATCTTTTCTCCCCACA...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAATCTAAAGCCACAGTaGGCACATACATACACATTC +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSNLKPQ*AHTYTF
Trigger: GAATGTGTATGTATGTGCTCACTGTGGCTTTAGATT...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTCTGAAAGCACTCGTATaGACGGACAAAATTATACTC +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLLKALV*TDKIIL
Trigger: GAGTATAATTTTGTCCGTTCATACGAGTGCTTTCAG...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACAAACACTTGCAGCTGTaGTGCCATACCGCCGGTGTG +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHKHLQL*CHTAGV
Trigger: CACACCGGCGGTATGGCATCACAGCTGCAAGTGTTT...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000369555.6
ENST00000369558.5
CDS-3UTR GCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAATGGATCTGTCTGAGTaGAAATCTGGGTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRMDLSE*KSGWFQ
Trigger: CTGGAACCACCCAGATTTGCACTCAGACAGATCCAT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAAGCAAGGATGGCTGCTaGATGATAGTGCTGTACTGG +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRSKDGC*MIVLYW
Trigger: CCAGTACAGCACTATCATGCAGCAGCCATCCTTGCT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAGTCAGCAAGGATGGCTaGTGCATGATAGTGCTGTAC +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRVSKDG*CMIVLY
Trigger: GTACAGCACTATCATGCAGCAGCCATCCTTGCTGAC...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAGAGACTGGAGCTGACTaGTTATTCTTCTTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRETGAD*LFFFEG
Trigger: CCCTTCGAAGAAGAATAAGCAGTCAGCTCCAGTCTC...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATATAAGAAGATGTGGTaGGGAGGGGACTGCTCCCAA +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRYKKMW*GGDCSQ
Trigger: TTGGGAGCAGTCCCCTCCGCACCACATCTTCTTATA...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGGGAGCCGCCGATGACTaGTGGTTCTGGCTAAGATTG +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKGAADD*WFWLRL
Trigger: CAATCTTAGCCAGAACCAGCAGTCATCGGCGGCTCC...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACATTCCTCCTCCCTCATaGTCACCAACTATAAGTAGG +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYIPPPS*SPTISR
Trigger: CCTACTTATAGTTGGTGAGCATGAGGGAGGAGGAAT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAGGCAAAGCTCATCAATaGCAGTATCTCATAATAGAC +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPGKAHQ*QYLIID
Trigger: GTCTATTATGAGATACTGGCATTGATGAGCTTTGCC...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCGGCAAAGCTCATCAATaGCAGTATCTCATAATAGAC +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGGKAHQ*QYLIID
Trigger: GTCTATTATGAGATACTGGCATTGATGAGCTTTGCC...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAAGAGAGCATTCAATTTaGTGCTGGCATACAAAGGAA +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAREHSI*CWHTKE
Trigger: TTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAGAGAGCATTCAATTTaGTGCTGGCATACAAAGGAA +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSREHSI*CWHTKE
Trigger: TTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTACAGGTGGATTTTTATaGTGGAAAATCGGAAATGCC +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLTGGFL*WKIGNA
Trigger: GGCATTTCCGATTTTCCAGCATAAAAATCCACCTGT...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACGGGGGCGAAAACACTTaGAGCTGTGATGCCATACCG +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHGGENT*SCDAIP
Trigger: CGGTATGGCATCACAGCTGCAAGTGTTTTCGCCCCC...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000369555.6
ENST00000369558.5
CDS-3UTR CCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACTGGAAGCTAGAACACTaGCCTGATTGTGCACTGTAT +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYWKLEH*PDCALY
Trigger: ATACAGTGCACAATCAGGCCAGTGTTCTAGCTTCCA...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCTGTTGTCTGACAACATaGGCAACACCAACATTCAGA +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFCCLTT*ATPTFR
Trigger: TCTGAATGTTGGTGTTGCCCATGTTGTCAGACAACA...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAAGGGCTGGGAGTATCTaGAATGATGATGGGCTGATG +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRRAGSI*NDDGLM
Trigger: CATCAGCCCATCATCATTCCAGATACTCCCAGCCCT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACTCAGTCCAGAGCTACTaGGCTTGTATTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYSVQSY*ACICCP
Trigger: AGGACAACAAATACAAGCCCAGTAGCTCTGGACTGA...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACGATGACATTAGACCTTaGCTTCAGTCCAGAGCTACT +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYDDIRP*LQSRAT
Trigger: AGTAGCTCTGGACTGAAGCCAAGGTCTAATGTCATC...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACAGGAGACCTGAGGCCTaGGTTGCTACAGTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHRRPEA*VATVQS
Trigger: TGACTGCACTGTAGCAACCCAGGCCTCAGGTCTCCT...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACGATGAGCAATGGAGCTaGTTGAGCCCAGTGCAGCAG +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHDEQWS*LSPVQQ
Trigger: CTGCTGCACTGGGCTCAACCAGCTCCATTGCTCATC...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTTGCAGAACAAGTTGCTaGCTAAGAAATTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPCRTSC*LRNFKR
Trigger: CCTCTTGAAATTTCTTAGCCAGCAACTTGTTCTGCA...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTTGCAGAACAAGTTGCTaGCTAAGAAATTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTCRTSC*LRNFKR
Trigger: CCTCTTGAAATTTCTTAGCCAGCAACTTGTTCTGCA...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCTTCTCCTCATAGTATaGGGACATGGTAAGCAATAC +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFLLLIV*GHGKQY
Trigger: GTATTGCTTACCATGTCCCCATACTATGAGGAGAAG...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGACTACCTGCCCCATCTTaGAAGCCCTTACTCCTTACA +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRLPAPS*KPLLLT
Trigger: TGTAAGGAGTAAGGGCTTCCAAGATGGGGCAGGTAG...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACACTGGGGTGCAGGAATaGGATTTGGTTTTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYTGVQE*DLVFFP
Trigger: AGGAAAGAAAACCAAATCCCATTCCTGCACCCCAGT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAGACTCCTATCTTAAGTaGTATCTGCTTATTGGACTG +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWADSYLK*YLLIGL
Trigger: CAGTCCAATAAGCAGATACCACTTAAGATAGGAGTC...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGAACAATACAAGCTCTTaGTATTATCCTTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQNNTSS*YYPFLW
Trigger: CCACAGAAAAGGATAATACCAAGAGCTTGTATTGTT...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCGGTGGATTTTTATGCTaGAAAATCGGAAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGGGFLC*KIGNAS
Trigger: ACTGGCATTTCCGATTTTCCAGCATAAAAATCCACC...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTGGTGGATTTTTATGCTaGAAAATCGGAAATGCCAGT +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLGGFLC*KIGNAS
Trigger: ACTGGCATTTCCGATTTTCCAGCATAAAAATCCACC...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCTCTAGTGGAGGACAATaGATGAGCAATCACAAAAGC +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFSSGGQ*MSNHKS
Trigger: GCTTTTGTGATTGCTCATCCATTGTCCTCCACTAGA...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAATTACTGTGCTTGCCTaGCTAAGGGCAGTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRITVLA*LRAVKL
Trigger: AAGCTTGACTGCCCTTAGCCAGGCAAGCACAGTAAT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAATCTTTGTGGTCACAGTaGTGGTTGTGGCAGCAGCAC +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKSLWSQ*WLWQQH
Trigger: GTGCTGCTGCCACAACCACCACTGTGACCACAAAGA...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTTCTGATGTACTTGAGTaGCAGTGGGCTAAATTTGTT +
Preference number: 4 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLSDVLE*QWAKFV
Trigger: AACAAATTTAGCCCACTGCCACTCAAGTACATCAGA...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGACACCTGCTGCAAGATTaGTCTGATGTACTTGAGTGG +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRHLLQD*SDVLEW
Trigger: CCACTCAAGTACATCAGACCAATCTTGCAGCAGGTG...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAGCTTCATCAAGGCTGTaGCCACCTGCTGCAAGATTG +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKASSRL*PPAARL
Trigger: CAATCTTGCAGCAGGTGGCCACAGCCTTGATGAAGC...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR CAA 72 bp CAATCACAAAAGCAGGCTCAGAATGGCCAGAACTGTTaGAAATGGAGTTCTTATTCCTGGGGTTGGTATTTC +
Preference number: 4 (lower is better)
Translates to: QSQKQAQNGQNC*KWSSYSWGWYF
Trigger: GAAATACCAACCCCAGGAATAAGAACTCCATTTCAAACAGTTCTGGCCATTCTGAGCCTGCTTTTGTGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAAGCCTTGTGTTTGTaGAATATAACGAATCTGATC +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGQALCL*NITNLI
Trigger: GATCAGATTCGTTATATTTCACAAACACAAGGCTTG...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACCTTCCGAGCTTCTTTTaGTTTTATTCCAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYLPSFF*FYSSLQ
Trigger: CTGGAGACTGGAATAAAATCAAAAGAAGCTCGGAAG...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAGGAAGAGACTGGAGCTaGCTGCTTATTCTTCTTCGA +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRGRDWS*LLILLR
Trigger: TCGAAGAAGAATAAGCAGTCAGCTCCAGTCTCTTCC...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATCCAGTGTAAATTGTTaGGCCTCGGGAAGACCCAAT +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRSSVNC*ASGRPN
Trigger: ATTGGGTCTTCCCGAGGCTCAACAATTTACACTGGA...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTAAACACAGGAGCAATTaGGAGAATCTCAATAGTAAC +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPKHRSN*ENLNSN
Trigger: GTTACTATTGAGATTCTCTCAATTGCTCCTGTGTTT...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACTGTTGGCAGGGAAACTaGGAACAATGCATTACACAA +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYCWQGN*EQCITQ
Trigger: TTGTGTAATGCATTGTTCTCAGTTTCCCTGCCAACA...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGACCTCAAAAGCCTCAATaGCTCAACAGGCTTTGGTTC +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRPQKPQ*LNRLWF
Trigger: GAACCAAAGCCTGTTGAGTCATTGAGGCTTTTGAGG...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAGATCCATGCAGGAGCTaGGAGTACAAGGACAATTTC +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRDPCRS*EYKDNF
Trigger: GAAATTGTCCTTGTACTCTCAGCTCCTGCATGGATC...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACCCAGTACCTTCTACTTaGCCCAGATCCATGCAGGAG +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHPVPST*PRSMQE
Trigger: CTCCTGCATGGATCTGGGTCAAGTAGAAGGTACTGG...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACTGGTACAGAGCTGGCTaGCCAGGCTCCATGAAATCT +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHWYRAG*PGSMKS
Trigger: AGATTTCATGGAGCCTGGTCAGCCAGCTCTGTACCA...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAGGGGATGTTCTTCTATaGTCTGCACACTACCGTTGC +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKGDVLL*SAHYRC
Trigger: GCAACGGTAGTGTGCAGATCATAGAAGAACATCCCC...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACCTGAAAGCACTCGTATaGACGGACAAAATTATACTC +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADLKALV*TDKIIL
Trigger: GAGTATAATTTTGTCCGTTCATACGAGTGCTTTCAG...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAATCAGACCAAGACTCTTaGGCTTCATCAAGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKSDQDS*ASSRLW
Trigger: CCACAGCCTTGATGAAGCTCAAGAGTCTTGGTCTGA...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTTCATGGTTAGATTTGTaGTTGTATTTGGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTSWLDL*LYLGQH
Trigger: ATGTTGCCCCAAATACAAGCACAAATCTAACCATGA...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAAGAAAGAGTAGCAGCTaGTGCAGTAGAACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRRKSSS*CSRTGS
Trigger: GCTTCCAGTTCTACTGCAGCAGCTGCTACTCTTTCT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGGGCCTCTGGAATCATTaGTGTGGGCTGGACAGAGTT +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKGLWNH*CGLDRV
Trigger: AACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCC...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAGAGACTGGAGCTGACTaGTTATTCTTCTTCGAAGGG +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRETGAD*LFFFEG
Trigger: CCCTTCGAAGAAGAATAAGCAGTCAGCTCCAGTCTC...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGCAGCATCCAGATGACTaGCCACTCACTGAAGCGACT +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKQHPDD*PLTEAT
Trigger: AGTCGCTTCAGTGAGTGGGCAGTCATCTGGATGCTG...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACCAGAGAAAAACCTTCTaGTTCAGTGGGCCCCTGCAG +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHQRKTF*FSGPLQ
Trigger: CTGCAGGGGCCCACTGAAGCAGAAGGTTTTTCTCTG...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCACAGCAAATGGTGAGCTaGCTTTTAAACACTACTTTA +
Preference number: 4 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAQQMVS*LLNTTL
Trigger: TAAAGTAGTGTTTAAAAGGCAGCTCACCATTTGCTG...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGCAAATGGTGAGCTaGCTTTTAAACACTACTTTA +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGQQMVS*LLNTTL
Trigger: TAAAGTAGTGTTTAAAAGGCAGCTCACCATTTGCTG...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTCAGCAAATGGTGAGCTaGCTTTTAAACACTACTTTA +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPQQMVS*LLNTTL
Trigger: TAAAGTAGTGTTTAAAAGGCAGCTCACCATTTGCTG...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCGGCAAAGCTCATCAATaGCAGTATCTCATAATAGAC +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFGKAHQ*QYLIID
Trigger: GTCTATTATGAGATACTGGCATTGATGAGCTTTGCC...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAATGTGCAGGAAGGACTaGCACATGGGAAAAGGAAAA +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRMCRKD*HMGKGK
Trigger: TTTTCCTTTTCCCATGTGGCAGTCCTTCCTGCACAT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGAAAATCAGAATGTaGTTGGCAAAAAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSKKIRM*LAKRRH
Trigger: GTGTCTCCTTTTTGCCAAGCACATTCTGATTTTCTT...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCAAGAAAATCAGAATGTaGTTGGCAAAAAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGKKIRM*LAKRRH
Trigger: GTGTCTCCTTTTTGCCAAGCACATTCTGATTTTCTT...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCACAGGTGGATTTTTATaGTGGAAAATCGGAAATGCC +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFTGGFL*WKIGNA
Trigger: GGCATTTCCGATTTTCCAGCATAAAAATCCACCTGT...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAACACATTACTGTGCTTaGCTGGCTAAGGGCAGTCAA +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRTHYCA*LAKGSQ
Trigger: TTGACTGCCCTTAGCCAGGCAAGCACAGTAATGTGT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGATCTGCACACTACCGTTaGTGTCAACTTCCTCACTTT +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRSAHYR*CQLPHF
Trigger: AAAGTGAGGAAGTTGACAGCAACGGTAGTGTGCAGA...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGATTAGGCGGGAAAGGATaGTCACTTCAATCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRLGGKG*SLQSVL
Trigger: AAGGACAGATTGAAGTGAGCATCCTTTCCCGCCTAA...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCAAATGTCTGTTGGAATaGATCTGTCTGAGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGKCLLE*ICLSAN
Trigger: ATTTGCACTCAGACAGATCCATTCCAACAGACATTT...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATGTCTGTTGGAATaGATCTGTCTGAGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPKCLLE*ICLSAN
Trigger: ATTTGCACTCAGACAGATCCATTCCAACAGACATTT...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAGTTTGAAACGCAGGTaGACATACTATAAATGTCTG +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSSLKRR*TYYKCL
Trigger: CAGACATTTATAGTATGTCCACCTGCGTTTCAAACT...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACTGTTGTCTGACAACATaGGCAACACCAACATTCAGA +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYCCLTT*ATPTFR
Trigger: TCTGAATGTTGGTGTTGCCCATGTTGTCAGACAACA...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGATCAGTCCAGAGCTACTaGGCTTGTATTTGTTGTCCT +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRSVQSY*ACICCP
Trigger: AGGACAACAAATACAAGCCCAGTAGCTCTGGACTGA...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGACAATGTAGGATTGGGTaGCAAACTGGTGTTGGTACT +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRQCRIG*QTGVGT
Trigger: AGTACCAACACCAGTTTGCCACCCAATCCTACATTG...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACAAAGCAGGCTCAGAATaGCCAGAACTGTTTGAAATG +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYKAGSE*PELFEM
Trigger: CATTTCAAACAGTTCTGGCCATTCTGAGCCTGCTTT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAGTAGGGCTGGCGAACTaGATCAACCAGCATGATGTT +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKVGLAN*INQHDV
Trigger: AACATCATGCTGGTTGATCCAGTTCGCCAGCCCTAC...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATATCACACAGCCCAGTaGCCACATATCAATAGCTTC +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRYHTAQ*PHINSF
Trigger: GAAGCTATTGATATGTGGTCACTGGGCTGTGTGATA...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGCACTGTATTGAGCTaGTTGCTGAAGCTCATGGTT +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRCTVLS*LLKLMV
Trigger: AACCATGAGCTTCAGCAATCAGCTCAATACAGTGCA...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGTGTGGGGAGAAAAGATaGGCAATGGAGCTGGTTGAG +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKCGEKR*AMELVE
Trigger: CTCAACCAGCTCCATTGCTCATCTTTTCTCCCCACA...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAATCCAGTGTAAATTGTTaGGCCTCGGGAAGACCCAAT +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKSSVNC*ASGRPN
Trigger: ATTGGGTCTTCCCGAGGCTCAACAATTTACACTGGA...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGATGTTGGCAGGGAAACTaGGAACAATGCATTACACAA +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRCWQGN*EQCITQ
Trigger: TTGTGTAATGCATTGTTCTCAGTTTCCCTGCCAACA...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGCCTGGGTTGCTACAGTaGAGTCACCAAGCTGAGTTT +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKPGLLQ*SHQAEF
Trigger: AAACTCAGCTTGGTGACTGCACTGTAGCAACCCAGG...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACAAGAAAATCAGAATGTaGTTGGCAAAAAGGAGACAC +
Preference number: 4 (lower is better)
Translates to: SRHRWIFMLENRKCQFADKKIRM*LAKRRH
Trigger: GTGTCTCCTTTTTGCCAAGCACATTCTGATTTTCTT...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACACAGGTGGATTTTTATaGTGGAAAATCGGAAATGCC +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYTGGFL*WKIGNA
Trigger: GGCATTTCCGATTTTCCAGCATAAAAATCCACCTGT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATCTGCACACTACCGTTaGTGTCAACTTCCTCACTTT +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRSAHYR*CQLPHF
Trigger: AAAGTGAGGAAGTTGACAGCAACGGTAGTGTGCAGA...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTAACATGATTGCTATGTaGAAAATCCAAAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPNMIAM*KIQKVS
Trigger: ACTCACCTTTTGGATTTTCCACATAGCAATCATGTT...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAACATGATTGCTATGTaGAAAATCCAAAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: SLFLGNCRRWASELFQVPNMIAM*KIQKVS
Trigger: ACTCACCTTTTGGATTTTCCACATAGCAATCATGTT...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAACATGATTGCTATGTaGAAAATCCAAAAGGTGAGT +
Preference number: 4 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSNMIAM*KIQKVS
Trigger: ACTCACCTTTTGGATTTTCCACATAGCAATCATGTT...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAACTGGAATCATTGCTGTaGGCTGGACAGAGTTGTGTA +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKLESLL*AGQSCV
Trigger: TACACAACTCTGTCCAGCCCACAGCAATGATTCCAG...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGGTGGCCAATGTCACATaGTTAGTCAGCAAGGATGGC +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKVANVT*LVSKDG
Trigger: GCCATCCTTGCTGACTAACCATGTGACATTGGCCAC...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAACATCTAGAGAGGACTTaGAAGAGACTGGAGCTGACT +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKHLERT*KRLELT
Trigger: AGTCAGCTCCAGTCTCTTCCAAGTCCTCTCTAGATG...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAAGAAGAGTCAGAGTCTaGAGAATCATTGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRRRVRV*RIIDSD
Trigger: GTCACTGTCAATGATTCTCCAGACTCTGACTCTTCT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAGATGACTGCTGGTTCTaGCTAAGATTGAGTGGTTGT +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRDDCWF*LRLSGC
Trigger: ACAACCACTCAATCTTAGCCAGAACCAGCAGTCATC...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACTCCCCAAATCCTTTATaGGCAGGAATGTCCCCATCC +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHSPNPL*AGMSPS
Trigger: GGATGGGGACATTCCTGCCCATAAAGGATTTGGGGA...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCAACAATACAAGCTCTTaGTATTATCCTTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGNNTSS*YYPFLW
Trigger: CCACAGAAAAGGATAATACCAAGAGCTTGTATTGTT...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGACTTAAAGCCTTAAGCTaGTTTGAGGTCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRLKALS*FEVRSL
Trigger: CAGTGACCTGACCTCAAACCAGCTTAAGGCTTTAAG...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTAATAATATCACCTCCTaGGAGCTATTAAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPNNITS*ELLKTL
Trigger: CAGAGTTTTTAATAGCTCCCAGGAGGTGATATTATT...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAATTACTGTGCTTGCCTaGCTAAGGGCAGTCAAGCTT +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKITVLA*LRAVKL
Trigger: AAGCTTGACTGCCCTTAGCCAGGCAAGCACAGTAAT...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGAGGGTCTGGCTGCTTTaGAAGGTTGATGTAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKRVWLL*KVDVAA
Trigger: TGCTGCTACATCAACCTTCCAAAGCAGCCAGACCCT...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTTCCACATTTTTGATATaGCTCAAGCAAAGAAACGTT +
Preference number: 4 (lower is better)
Translates to: QWRHQSISGITLEDHIHTSTFLI*LKQRNV
Trigger: AACGTTTCTTTGCTTGAGCCATATCAAAAATGTGGA...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAAACTGCTACTCTTTGTaGTCACAGTGGTGGTTGTGG +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKNCYSL*SQWWLW
Trigger: CCACAACCACCACTGTGACCACAAAGAGTAGCAGTT...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACCAAGCCTTGTGTTTGTaGAATATAACGAATCTGATC +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYQALCL*NITNLI
Trigger: GATCAGATTCGTTATATTTCACAAACACAAGGCTTG...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAAAGGGACTCTTGATCTaGCTCACTGTATCATACATG +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRKGLLI*LTVSYM
Trigger: CATGTATGATACAGTGAGTCAGATCAAGAGTCCCTT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAATGGATTGTTGTTGTCTaGCAACATGGGCAACACCAA +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKWIVVV*QHGQHQ
Trigger: TTGGTGTTGCCCATGTTGTCAGACAACAACAATCCA...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGGTATTCTCTTCGGTCTaGCTTCTCTGCCAACATGTC +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKVFSSV*LLCQHV
Trigger: GACATGTTGGCAGAGAAGGCAGACCGAAGAGAATAC...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACAGAAAGAGTAGCAGCTaGTGCAGTAGAACTGGAAGC +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHRKSSS*CSRTGS
Trigger: GCTTCCAGTTCTACTGCAGCAGCTGCTACTCTTTCT...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGATGGATCTGTCTGAGTaGAAATCTGGGTGGTTCCAG +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKMDLSE*KSGWFQ
Trigger: CTGGAACCACCCAGATTTGCACTCAGACAGATCCAT...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAAGAGAGCATTCAATTTaGTGCTGGCATACAAAGGAA +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRREHSI*CWHTKE
Trigger: TTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGGGAATGTCAACTATGTaGAGGAAGGACTGCCACATG +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKGMSTM*RKDCHM
Trigger: CATGTGGCAGTCCTTCCTGCACATAGTTGACATTCC...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACAAATGTCTGTTGGAATaGATCTGTCTGAGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYKCLLE*ICLSAN
Trigger: ATTTGCACTCAGACAGATCCATTCCAACAGACATTT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACAATTATAAGAAGATGTaGTGCGGAGGGGACTGCTCC +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHNYKKM*CGGDCS
Trigger: GGAGCAGTCCCCTCCGCACCACATCTTCTTATAATT...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAAGAAGAGTCAGAGTCTaGAGAATCATTGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRRRVRV*RIIDSD
Trigger: GTCACTGTCAATGATTCTCCAGACTCTGACTCTTCT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGCACTCAGGGTATCAGTaGAATAAGGGCTGCTCAAAG +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKHSGYQ*NKGCSK
Trigger: CTTTGAGCAGCCCTTATTCCACTGATACCCTGAGTG...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAAAGCTGAGTTTTCAGTaGAGGCACAATGATAGTGCG +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKKLSFQ*RHNDSA
Trigger: CGCACTATCATTGTGCCTCCACTGAAAACTCAGCTT...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAGACTCCTATCTTAAGTaGTATCTGCTTATTGGACTG +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRDSYLK*YLLIGL
Trigger: CAGTCCAATAAGCAGATACCACTTAAGATAGGAGTC...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCAACAATACAAGCTCTTaGTATTATCCTTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFNNTSS*YYPFLW
Trigger: CCACAGAAAAGGATAATACCAAGAGCTTGTATTGTT...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCTCCACATTTTTGATATaGCTCAAGCAAAGAAACGTT +
Preference number: 4 (lower is better)
Translates to: SEQSLFLGNCRRWASELFSTFLI*LKQRNV
Trigger: AACGTTTCTTTGCTTGAGCCATATCAAAAATGTGGA...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR CAA 72 bp CCAGAACTGTTTGAAATGGAGTTCTTATTCCTGGGGTaGGTATTTCAGCTGAGCACTGAAAATAATATCACC +
Preference number: 4 (lower is better)
Translates to: PELFEMEFLFLG*VFQLSTENNIT
Trigger: GGTGATATTATTTTCAGTGCTCAGCTGAAATACCAACCCCAGGAATAAGAACTCCATTTCAAACAGTTCTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGTGGATTGTTGTTGTCTaGCAACATGGGCAACACCAA +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKWIVVV*QHGQHQ
Trigger: TTGGTGTTGCCCATGTTGTCAGACAACAACAATCCA...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAAAACACAGGAGCAATTaGGAGAATCTCAATAGTAAC +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRKHRSN*ENLNSN
Trigger: GTTACTATTGAGATTCTCTCAATTGCTCCTGTGTTT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACATTCCTCCTCCCTCATaGTCACCAACTATAAGTAGG +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHIPPPS*SPTISR
Trigger: CCTACTTATAGTTGGTGAGCATGAGGGAGGAGGAAT...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACGGAAGAAGTTGGAAATaGCAAGTTCTGAGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHGRSWK*QVLRED
Trigger: GTCCTCTCTCAGAACTTGGCATTTCCAACTTCTTCC...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAAGGGATGTTGAAATTTaGTACCTGGTGAGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKRDVEI*YLVRGV
Trigger: AACTCCTCTCACCAGGTAGCAAATTTCAACATCCCT...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAATGTTCTTCTATGATCTaGACACTACCGTTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKCSSMI*TLPLLS
Trigger: TGACAGCAACGGTAGTGTGCAGATCATAGAAGAACA...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACTTAGGCGGGAAAGGATaGTCACTTCAATCTGTCCTT +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHLGGKG*SLQSVL
Trigger: AAGGACAGATTGAAGTGAGCATCCTTTCCCGCCTAA...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAATGTTGTCTGACAACATaGGCAACACCAACATTCAGA +
Preference number: 4 (lower is better)
Translates to: REHSICCWHTKEATLKYKCCLTT*ATPTFR
Trigger: TCTGAATGTTGGTGTTGCCCATGTTGTCAGACAACA...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGGATGACATTAGACCTTaGCTTCAGTCCAGAGCTACT +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKDDIRP*LQSRAT
Trigger: AGTAGCTCTGGACTGAAGCCAAGGTCTAATGTCATC...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACAAGCTGAGTTTTCAGTaGAGGCACAATGATAGTGCG +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHKLSFQ*RHNDSA
Trigger: CGCACTATCATTGTGCCTCCACTGAAAACTCAGCTT...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACGGTAACTGCAGAAGATaGGCATCTGAACTCTTCCAA +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHGNCRR*ASELFQ
Trigger: TTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACC...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACCTTAAAGCCTTAAGCTaGTTTGAGGTCAGGTCACTG +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHLKALS*FEVRSL
Trigger: CAGTGACCTGACCTCAAACCAGCTTAAGGCTTTAAG...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACAATAATATCACCTCCTaGGAGCTATTAAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYNNITS*ELLKTL
Trigger: CAGAGTTTTTAATAGCTCCCAGGAGGTGATATTATT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
3UTR CAA 72 bp AAAGAAACCTCAAAAGCCTCAATGACTCAACAGGCTTaGGTTCCTTCTCTATATTCTTCACCAGCTAAGAAA +
Preference number: 4 (lower is better)
Translates to: KETSKASMTQQA*VPSLYSSPAKK
Trigger: TTTCTTAGCTGGTGAAGAATATAGAGAAGGAACCAAAGCCTGTTGAGTCATTGAGGCTTTTGAGGTTTCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACCTTCCGAGCTTCTTTTaGTTTTATTCCAGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHLPSFF*FYSSLQ
Trigger: CTGGAGACTGGAATAAAATCAAAAGAAGCTCGGAAG...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGAAGGGACTCTTGATCTaGCTCACTGTATCATACATG +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKKGLLI*LTVSYM
Trigger: CATGTATGATACAGTGAGTCAGATCAAGAGTCCCTT...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACCCCTGCAGAACAAGTTaGTGGCTAAGAAATTTCAAG +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHPCRTS*WLRNFK
Trigger: CTTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGG...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACAGGGATGTTGAAATTTaGTACCTGGTGAGAGGAGTT +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHRDVEI*YLVRGV
Trigger: AACTCCTCTCACCAGGTAGCAAATTTCAACATCCCT...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAAAATGTCTGTTGGAATaGATCTGTCTGAGTGCAAAT +
Preference number: 4 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRKCLLE*ICLSAN
Trigger: ATTTGCACTCAGACAGATCCATTCCAACAGACATTT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAAACAATACAAGCTCTTaGTATTATCCTTTTCTGTGG +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRNNTSS*YYPFLW
Trigger: CCACAGAAAAGGATAATACCAAGAGCTTGTATTGTT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAAATAATATCACCTCCTaGGAGCTATTAAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRNNITS*ELLKTL
Trigger: CAGAGTTTTTAATAGCTCCCAGGAGGTGATATTATT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR TCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGAATCTAAAGCCACAGTaGGCACATACATACACATTC +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKNLKPQ*AHTYTF
Trigger: GAATGTGTATGTATGTGCTCACTGTGGCTTTAGATT...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACTGCAGAACAAGTTGCTaGCTAAGAAATTTCAAGAGG +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHCRTSC*LRNFKR
Trigger: CCTCTTGAAATTTCTTAGCCAGCAACTTGTTCTGCA...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACGACTCCTATCTTAAGTaGTATCTGCTTATTGGACTG +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHDSYLK*YLLIGL
Trigger: CAGTCCAATAAGCAGATACCACTTAAGATAGGAGTC...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGTCTGATGTACTTGAGTaGCAGTGGGCTAAATTTGTT +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKSDVLE*QWAKFV
Trigger: AACAAATTTAGCCCACTGCCACTCAAGTACATCAGA...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR GCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGTCATGGTTAGATTTGTaGTTGTATTTGGGGCAACAT +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKSWLDL*LYLGQH
Trigger: ATGTTGCCCCAAATACAAGCACAAATCTAACCATGA...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACTTATATTTGACATGGTaGAATACAAGGGCAATTGTC +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHLYLTW*NTRAIV
Trigger: GACAATTGCCCTTGTATTCCACCATGTCAAATATAA...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000340480.8
CDS-3UTR CCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACAATAATATCACCTCCTaGGAGCTATTAAAAACTCTG +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHNNITS*ELLKTL
Trigger: CAGAGTTTTTAATAGCTCCCAGGAGGTGATATTATT...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACTCCACATTTTTGATATaGCTCAAGCAAAGAAACGTT +
Preference number: 4 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHSTFLI*LKQRNV
Trigger: AACGTTTCTTTGCTTGAGCCATATCAAAAATGTGGA...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CCA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGTCCACATTTTTGATATaGCTCAAGCAAAGAAACGTT +
Preference number: 4 (lower is better)
Translates to: SSVILRNYLFLEACCKRKSTFLI*LKQRNV
Trigger: AACGTTTCTTTGCTTGAGCCATATCAAAAATGTGGA...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS CCA 90 bp GCTGTGATGCCATACCGCCGGTGTGTCTGGTTCTCAGCCGCGAGCTaGGGCTGCCGTGAGGAGGCGGCGGAGGAGACGAGATCTGGGGCC +
Preference number: 5 (lower is better)
Translates to: AVMPYRRCVWFSAAS*GCREEAAEETRSGA
Trigger: GGCCCCAGATCTCGTCTCCTCCGCCGCCTCCTCACGGCAGCCCCAGCTCGCGGCTGAGAACCAGACACACCGGCGGTATGGCATCACAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
CDS GCA 90 bp AGCGTGGATCGAGTGCGGGGCCTGGACTTCCCGCCCCCTCCGCACTaGAGACTCTGCGGTGATTTAAAGGTGCCTGGCGGTGGTACGGGA +
Preference number: 5 (lower is better)
Translates to: SVDRVRGLDFPPPPH*RLCGDLKVPGGGTG
Trigger: TCCCGTACCACCGCCAGGCACCTTTAAATCACCGCAGAGTCTGCAGTGCGGAGGGGGCGGGAAGTCCAGGCCCCGCACTCGATCCACGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426820.7
CDS GCA 90 bp CTGCAGTACAGCGGCAGTCTGTTCAACCAGCGCCGGCCGGCCGGCTaGGCAGCTCAGAGTAAAGGGCACCGCATACTGCGGTGTGATGGT +
Preference number: 5 (lower is better)
Translates to: LQYSGSLFNQRRPAG*AAQSKGHRILRCDG
Trigger: ACCATCACACCGCAGTATGCGGTGCCCTTTACTCTGAGCTGCGCAGCCGGCCGGCCGGCGCTGGTTGAACAGACTGCCGCTGTACTGCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
CDS GCA 90 bp CGAGTGCGGGGCCTGGACTTCCCGCCCCCTCCGCACTGCAGACTCTaGGGTGATTTAAAGGTGCCTGGCGGTGGTACGGGATCCAACTGT +
Preference number: 5 (lower is better)
Translates to: RVRGLDFPPPPHCRL*GDLKVPGGGTGSNC
Trigger: ACAGTTGGATCCCGTACCACCGCCAGGCACCTTTAAATCACCGCAGAGTCTGCAGTGCGGAGGGGGCGGGAAGTCCAGGCCCCGCACTCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426820.7
CDS CCA 90 bp TCGCATAGTACTGATTGCAGTAGGAGTCGGTGGGCCTCGAGTAGGTaGGCCTCCGTAGGGAGCCAGCGTGGATCGAGTGCGGGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: SHSTDCSRSRWASSR*ASVGSQRGSSAGPG
Trigger: TCCAGGCCCCGCACTCGATCCACGCTGGCTCCCTACGGAGGCCCACCTACTCGAGGCCCACCGACTCCTACTGCAATCAGTACTATGCGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369559.8
ENST00000426820.7
ENST00000626993.2
CDS CCA 90 bp GACTCTCTAGGACGATCGCATAGTACTGATTGCAGTAGGAGTCGGTaGGCCTCGAGTAGGTGGGCCTCCGTAGGGAGCCAGCGTGGATCG +
Preference number: 5 (lower is better)
Translates to: DSLGRSHSTDCSRSR*ASSRWASVGSQRGS
Trigger: CGATCCACGCTGGCTCCCTACGGAGGCCCACCTACTCGAGGCCCACCGACTCCTACTGCAATCAGTACTATGCGATCGTCCTAGAGAGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369559.8
ENST00000426820.7
ENST00000626993.2
CDS TCA 90 bp GCTACCCCAGGCAACTGTTGCCAAGTTGAAGGCAGGAGAATTTGCTaGGTCCCTCCAGGCCACGCCTGCAGTACAGCGGCAGTCTGTTCA +
Preference number: 5 (lower is better)
Translates to: ATPGNCCQVEGRRIC*VPPGHACSTAAVCS
Trigger: TGAACAGACTGCCGCTGTACTGCAGGCGTGGCCTGGAGGGACTCAGCAAATTCTCCTGCCTTCAACTTGGCAACAGTTGCCTGGGGTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
CDS TCA 90 bp CTGCAGGAGCTGGGAGGAGGAGGCCCTGGTCGTAAGCAGGGATGTTaGAATTTGCTACCTGGTGAGAGGAGTTGGCTTGCCCTTGTGTGG +
Preference number: 5 (lower is better)
Translates to: LQELGGGGPGRKQGC*NLLPGERSWLALVW
Trigger: CCACACAAGGGCAAGCCAACTCCTCTCACCAGGTAGCAAATTTCAACATCCCTGCTTACGACCAGGGCCTCCTCCTCCCAGCTCCTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000503968.1
ENST00000514621.5
ENST00000626993.2
CDS GCA 90 bp AGCTGGGAGGAGGAGGCCCTGGTCGTAAGCAGGGATGTTGAAATTTaGTACCTGGTGAGAGGAGTTGGCTTGCCCTTGTGTGGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SWEEEALVVSRDVEI*YLVRGVGLPLCGWE
Trigger: CTCCCAGCCACACAAGGGCAAGCCAACTCCTCTCACCAGGTAGCAAATTTCAACATCCCTGCTTACGACCAGGGCCTCCTCCTCCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000503968.1
ENST00000514621.5
ENST00000626993.2
CDS CCA 90 bp CAGCTAGCTGCTGTCCACTCCCCATGGCCTCTGGAATCATTGCTGTaGGCTGGACAGAGTTGTGTAGAGCTACCCCAGGCAACTGTTGCC +
Preference number: 5 (lower is better)
Translates to: QLAAVHSPWPLESLL*AGQSCVELPQATVA
Trigger: GGCAACAGTTGCCTGGGGTAGCTCTACACAACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCCATGGGGAGTGGACAGCAGCTAGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CCA 90 bp GGACCAGCTGGTAATCCCCTTCTCCGCTGGAACTGCTACTCTTTGTaGTCACAGTGGTGGTTGTGGCAGCAGCACCCACCACAGTCCTGT +
Preference number: 5 (lower is better)
Translates to: GPAGNPLLRWNCYSL*SQWWLWQQHPPQSC
Trigger: ACAGGACTGTGGTGGGTGCTGCTGCCACAACCACCACTGTGACCACAAAGAGTAGCAGTTCCAGCGGAGAAGGGGATTACCAGCTGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCAGGCTGCAGCATGCCTaGAGGAACCCTGTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSRLQHA*RNPVGR
Trigger: TCTCCCCACAGGGTTCCTCAAGGCATGCTGCAGCCT...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS GCA 90 bp GGATCTCATGCTGGACCAGCTGGTAATCCCCTTCTCCGCTGGAACTaGTACTCTTTGTGGTCACAGTGGTGGTTGTGGCAGCAGCACCCA +
Preference number: 5 (lower is better)
Translates to: GSHAGPAGNPLLRWN*YSLWSQWWLWQQHP
Trigger: TGGGTGCTGCTGCCACAACCACCACTGTGACCACAAAGAGTAGCAGTTCCAGCGGAGAAGGGGATTACCAGCTGGTCCAGCATGAGATCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGAGCAATGGAGCTGGTaGAGCCCAGTGCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSEQWSW*SPVQQQ
Trigger: CTGCTGCTGCACTGGGCTCAACCAGCTCCATTGCTC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCGAGCAATGGAGCTGGTaGAGCCCAGTGCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPEQWSW*SPVQQQ
Trigger: CTGCTGCTGCACTGGGCTCAACCAGCTCCATTGCTC...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAGGCTGCAGCATGCCTaGAGGAACCCTGTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSRLQHA*RNPVGR
Trigger: TCTCCCCACAGGGTTCCTCAAGGCATGCTGCAGCCT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGCTGCAGCATGCCTaGAGGAACCCTGTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLRLQHA*RNPVGR
Trigger: TCTCCCCACAGGGTTCCTCAAGGCATGCTGCAGCCT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGTGAGAGGAGTTGGCTaGCCCTTGTGTGGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSVRGVG*PLCGWE
Trigger: CTCCCAGCCACACAAGGGCAAGCCAACTCCTCTCAC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS GCA 90 bp CATCTGCCACAACTCTGCCAGGCCCCTCCAAAACGGATCCACTATTaGCTCGGAGAGCACTCAGGGTATCAGTGGAATAAGGGCTGCTCA +
Preference number: 5 (lower is better)
Translates to: HLPQLCQAPPKRIHY*LGEHSGYQWNKGCS
Trigger: TGAGCAGCCCTTATTCCACTGATACCCTGAGTGCTCTCCGAGGCAATAGTGGATCCGTTTTGGAGGGGCCTGGCAGAGTTGTGGCAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CCA 90 bp AGCTGCTGTCCACTCCCCATGGCCTCTGGAATCATTGCTGTGGGCTaGACAGAGTTGTGTAGAGCTACCCCAGGCAACTGTTGCCAAGTT +
Preference number: 5 (lower is better)
Translates to: SCCPLPMASGIIAVG*TELCRATPGNCCQV
Trigger: AACTTGGCAACAGTTGCCTGGGGTAGCTCTACACAACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCCATGGGGAGTGGACAGCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CCA 90 bp GGTAATCCCCTTCTCCGCTGGAACTGCTACTCTTTGTGGTCACAGTaGTGGTTGTGGCAGCAGCACCCACCACAGTCCTGTTTTGCAGCA +
Preference number: 5 (lower is better)
Translates to: GNPLLRWNCYSLWSQ*WLWQQHPPQSCFAA
Trigger: TGCTGCAAAACAGGACTGTGGTGGGTGCTGCTGCCACAACCACCACTGTGACCACAAAGAGTAGCAGTTCCAGCGGAGAAGGGGATTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTTCTCTCCTGTGAGGTaGGAGCCGCCGATGACTGCT +
Preference number: 5 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPFSPVR*EPPMTA
Trigger: AGCAGTCATCGGCGGCTCCAACCTCACAGGAGAGAA...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATTCTCTCCTGTGAGGTaGGAGCCGCCGATGACTGCT +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSFSPVR*EPPMTA
Trigger: AGCAGTCATCGGCGGCTCCAACCTCACAGGAGAGAA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGAAGGGTCTCCTCTCCTaGCAGGCAATGCCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLKGLLS*QAMPLL
Trigger: GAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCTT...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTAGGGTCCACGGGGGCTaGCTGGTCCATCCTAAGGCA +
Preference number: 5 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSRVHGG*LVHPKA
Trigger: TGCCTTAGGATGGACCAGCAAGCCCCCGTGGACCCT...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGAGGGTCCACGGGGGCTaGCTGGTCCATCCTAAGGCA +
Preference number: 5 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQRVHGG*LVHPKA
Trigger: TGCCTTAGGATGGACCAGCAAGCCCCCGTGGACCCT...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS TCA 90 bp CTCAGAGTAAAGGGCACCGCATACTGCGGTGTGATGGTGGCTACTTaGGGGTGGAGAGTTGCTACCATTAGTGGTGTACAGCTTCCCTGC +
Preference number: 5 (lower is better)
Translates to: LRVKGTAYCGVMVAT*GWRVATISGVQLPC
Trigger: GCAGGGAAGCTGTACACCACTAATGGTAGCAACTCTCCACCCTCAAGTAGCCACCATCACACCGCAGTATGCGGTGCCCTTTACTCTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
CDS CCA 90 bp CAGAGGCTGAGCAGTGGCCAATGTCACATGGTTAGTCAGCAAGGATaGCTGCTGCATGATAGTGCTGTACTGGTTGCCATGAGAGTGGGC +
Preference number: 5 (lower is better)
Translates to: QRLSSGQCHMVSQQG*LLHDSAVLVAMRVG
Trigger: GCCCACTCTCATGGCAACCAGTACAGCACTATCATGCAGCAGCCATCCTTGCTGACTAACCATGTGACATTGGCCACTGCTCAGCCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CCA 90 bp CGAGCTATCAGCGGCTGTTACAACAATATGCTCCACTGCAGGAGCTaGGAGGAGGAGGCCCTGGTCGTAAGCAGGGATGTTGAAATTTGC +
Preference number: 5 (lower is better)
Translates to: RAISGCYNNMLHCRS*EEEALVVSRDVEIC
Trigger: GCAAATTTCAACATCCCTGCTTACGACCAGGGCCTCCTCCTCCCAGCTCCTGCAGTGGAGCATATTGTTGTAACAGCCGCTGATAGCTCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000503968.1
ENST00000514621.5
ENST00000626993.2
CDS CCA 90 bp AGCAAAGGATCTCATGCTGGACCAGCTGGTAATCCCCTTCTCCGCTaGAACTGCTACTCTTTGTGGTCACAGTGGTGGTTGTGGCAGCAG +
Preference number: 5 (lower is better)
Translates to: SKGSHAGPAGNPLLR*NCYSLWSQWWLWQQ
Trigger: CTGCTGCCACAACCACCACTGTGACCACAAAGAGTAGCAGTTCCAGCGGAGAAGGGGATTACCAGCTGGTCCAGCATGAGATCCTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTGGCCTCTGGAATCATaGCTGTGGGCTGGACAGAGT +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLWPLES*LWAGQS
Trigger: ACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCCA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATTCTCTCCTGTGAGGTaGGAGCCGCCGATGACTGCT +
Preference number: 5 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIFSPVR*EPPMTA
Trigger: AGCAGTCATCGGCGGCTCCAACCTCACAGGAGAGAA...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGCAATGGAGCTGGTaGAGCCCAGTGCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQEQWSW*SPVQQQ
Trigger: CTGCTGCTGCACTGGGCTCAACCAGCTCCATTGCTC...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAAGACCCAATGTAGGATaGGGTGGCAAACTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGRPNVG*GGKLVL
Trigger: CAACACCAGTTTGCCACCCAATCCTACATTGGGTCT...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAGGTATCCAGTGTAAATaGTTGAGCCTCGGGAAGACC +
Preference number: 5 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGGIQCK*LSLGKT
Trigger: GGTCTTCCCGAGGCTCAACAATTTACACTGGATACC...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTAAGGGTCTCCTCTCCTaGCAGGCAATGCCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSKGLLS*QAMPLL
Trigger: GAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCTT...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGTGAGAGGAGTTGGCTaGCCCTTGTGTGGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQVRGVG*PLCGWE
Trigger: CTCCCAGCCACACAAGGGCAAGCCAACTCCTCTCAC...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCACCACAGTCCTGTTTaGCAGCATGAGAGGGGGATG +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLHHSPV*QHERGM
Trigger: CATCCCCCTCTCATGCTGCAAAACAGGACTGTGGTG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCTTGAGGGTGGAGAGTaGCTACCATTAGTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLLEGGE*LPLVVY
Trigger: GTACACCACTAATGGTAGCAACTCTCCACCCTCAAG...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTGTGATGGTGGCTACTaGAGGGTGGAGAGTTGCTAC +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLCDGGY*RVESCY
Trigger: GTAGCAACTCTCCACCCTCAAGTAGCCACCATCACA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGGGCTGATGCTGATCTaGGACAGGGACCAAGGAATT +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLGLMLI*DRDQGI
Trigger: AATTCCTTGGTCCCTGTCCAAGATCAGCATCAGCCC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGGCTGATGCTGATCTaGGACAGGGACCAAGGAATT +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSGLMLI*DRDQGI
Trigger: AATTCCTTGGTCCCTGTCCAAGATCAGCATCAGCCC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAAACGGATCCACTATaGCCTCGGAGAGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLKTDPL*PRRALR
Trigger: CCTGAGTGCTCTCCGAGGCAATAGTGGATCCGTTTT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCACTGGCTTAGTCTTATaGCTCAGGAGACCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPTGLVL*LRRPEA
Trigger: GGCCTCAGGTCTCCTGAGCAATAAGACTAAGCCAGT...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACTGGCTTAGTCTTATaGCTCAGGAGACCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLTGLVL*LRRPEA
Trigger: GGCCTCAGGTCTCCTGAGCAATAAGACTAAGCCAGT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAATCCAGTGTAAATTGTaGAGCCTCGGGAAGACCCAA +
Preference number: 5 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGIQCKL*SLGKTQ
Trigger: TTGGGTCTTCCCGAGGCTCAACAATTTACACTGGAT...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAAGGGTCCACGGGGGCTaGCTGGTCCATCCTAAGGCA +
Preference number: 5 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWARVHGG*LVHPKA
Trigger: TGCCTTAGGATGGACCAGCAAGCCCCCGTGGACCCT...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCCTTTCTGTGAGTTCCTaGTCACCAGCGGCACCACAA +
Preference number: 5 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPLSVSS*SPAAPQ
Trigger: TTGTGGTGCCGCTGGTGACAAGGAACTCACAGAAAG...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCATAGCCACAATTTCCTaGGTGCTCCTCTTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSIATIS*VLLFQH
Trigger: GTGCTGGAAGAGGAGCACCAAGGAAATTGTGGCTAT...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCTTGAGGGTGGAGAGTaGCTACCATTAGTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLLEGGE*LPLVVY
Trigger: GTACACCACTAATGGTAGCAACTCTCCACCCTCAAG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
CDS-3UTR CAA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGTGGCCTCTGGAATCATaGCTGTGGGCTGGACAGAGT +
Preference number: 5 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQWPLES*LWAGQS
Trigger: ACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCCA...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCGGAACTGGATTGTTGTaGTCTGACAACATGGGCAAC +
Preference number: 5 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLGTGLL*SDNMGN
Trigger: GTTGCCCATGTTGTCAGACAACAACAATCCAGTTCC...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGAGGGAACTGGATTGTaGTTGTCTGACAACATGGGC +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSEGTGL*LSDNMG
Trigger: GCCCATGTTGTCAGACAACAACAATCCAGTTCCCTC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAACATCTAGAGAGGACTaGGAAGAGACTGGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSTSRED*EETGAD
Trigger: GTCAGCTCCAGTCTCTTCCAAGTCCTCTCTAGATGT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACCAGAGCTACTGGGCTaGTATTTGTTGTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSPELLG*YLLSSS
Trigger: GGAAGAGGACAACAAATACAAGCCCAGTAGCTCTGG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCCCAGAGCTACTGGGCTaGTATTTGTTGTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPPELLG*YLLSSS
Trigger: GGAAGAGGACAACAAATACAAGCCCAGTAGCTCTGG...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGACTGGCTTAGTCTTATaGCTCAGGAGACCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLTGLVL*LRRPEA
Trigger: GGCCTCAGGTCTCCTGAGCAATAAGACTAAGCCAGT...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTGGTTCTGGCTAAGATaGAGTGGTTGTGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPWFWLR*SGCAAL
Trigger: CAGTGCAGCACAACCACTCAATCTTAGCCAGAACCA...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGGTTCTGGCTAAGATaGAGTGGTTGTGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSWFWLR*SGCAAL
Trigger: CAGTGCAGCACAACCACTCAATCTTAGCCAGAACCA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTGGTTCTGGCTAAGATaGAGTGGTTGTGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLWFWLR*SGCAAL
Trigger: CAGTGCAGCACAACCACTCAATCTTAGCCAGAACCA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCGAGCAATGGAGCTGGTaGAGCCCAGTGCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGEQWSW*SPVQQQ
Trigger: CTGCTGCTGCACTGGGCTCAACCAGCTCCATTGCTC...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCAGGCTGCAGCATGCCTaGAGGAACCCTGTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGRLQHA*RNPVGR
Trigger: TCTCCCCACAGGGTTCCTCAAGGCATGCTGCAGCCT...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAGGCTGCAGCATGCCTaGAGGAACCCTGTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSRLQHA*RNPVGR
Trigger: TCTCCCCACAGGGTTCCTCAAGGCATGCTGCAGCCT...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGACCCAATGTAGGATaGGGTGGCAAACTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLRPNVG*GGKLVL
Trigger: CAACACCAGTTTGCCACCCAATCCTACATTGGGTCT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAGACCCAATGTAGGATaGGGTGGCAAACTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSRPNVG*GGKLVL
Trigger: CAACACCAGTTTGCCACCCAATCCTACATTGGGTCT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCATCCAGTGTAAATTGTaGAGCCTCGGGAAGACCCAA +
Preference number: 5 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLIQCKL*SLGKTQ
Trigger: TTGGGTCTTCCCGAGGCTCAACAATTTACACTGGAT...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGTATCCAGTGTAAATaGTTGAGCCTCGGGAAGACC +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSGIQCK*LSLGKT
Trigger: GGTCTTCCCGAGGCTCAACAATTTACACTGGATACC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGGTATCCAGTGTAAATaGTTGAGCCTCGGGAAGACC +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLGIQCK*LSLGKT
Trigger: GGTCTTCCCGAGGCTCAACAATTTACACTGGATACC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCGGTATCCAGTGTAAATaGTTGAGCCTCGGGAAGACC +
Preference number: 5 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPGIQCK*LSLGKT
Trigger: GGTCTTCCCGAGGCTCAACAATTTACACTGGATACC...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGCTTTCTGTGAGTTCCTaGTCACCAGCGGCACCACAA +
Preference number: 5 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLLSVSS*SPAAPQ
Trigger: TTGTGGTGCCGCTGGTGACAAGGAACTCACAGAAAG...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGCCCAGTACCTTCTACTaGACCCAGATCCATGCAGGA +
Preference number: 5 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLPSTFY*TQIHAG
Trigger: TCCTGCATGGATCTGGGTCAAGTAGAAGGTACTGGG...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCCCATCCTGCACCTCCTaGACACCATCTCTATCTACA +
Preference number: 5 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPPSCTS*TPSLST
Trigger: TGTAGATAGAGATGGTGTCAAGGAGGTGCAGGATGG...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGTGGTATCTGCTTATaGGACTGGGGTGCAGGAATG +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLSGICL*DWGAGM
Trigger: CATTCCTGCACCCCAGTCCAATAAGCAGATACCACT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTGGAACTGCTACTCTTaGTGGTCACAGTGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLWNCYS*WSQWWL
Trigger: CAACCACCACTGTGACCACAAAGAGTAGCAGTTCCA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATGGAACTGCTACTCTTaGTGGTCACAGTGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSWNCYS*WSQWWL
Trigger: CAACCACCACTGTGACCACAAAGAGTAGCAGTTCCA...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATAGCCACAATTTCCTaGGTGCTCCTCTTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLIATIS*VLLFQH
Trigger: GTGCTGGAAGAGGAGCACCAAGGAAATTGTGGCTAT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCATAGCCACAATTTCCTaGGTGCTCCTCTTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPIATIS*VLLFQH
Trigger: GTGCTGGAAGAGGAGCACCAAGGAAATTGTGGCTAT...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCATCAGACCAAGACTCTaGAGCTTCATCAAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSIRPRL*SFIKAV
Trigger: CACAGCCTTGATGAAGCTCAAGAGTCTTGGTCTGAT...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS TCA 90 bp AGAAACGTTGCTTCTGTGAGTCAGGGTCTGGCTGCTTTGGAAGGTTaGTGTAGCAGCACTGCCCGAGCTATCAGCGGCTGTTACAACAAT +
Preference number: 5 (lower is better)
Translates to: RNVASVSQGLAALEG*CSSTARAISGCYNN
Trigger: ATTGTTGTAACAGCCGCTGATAGCTCGGGCAGTGCTGCTACATCAACCTTCCAAAGCAGCCAGACCCTGACTCACAGAAGCAACGTTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000514621.5
ENST00000626993.2
CDS GCA 90 bp GGACAGGGACCAAGGAATTATAAGAAGATGTGGTGCGGAGGGGACTaGTCCCAACCAGAGAATAGACTTGGGAAGGCAGAACATCTAGAG +
Preference number: 5 (lower is better)
Translates to: GQGPRNYKKMWCGGD*SQPENRLGKAEHLE
Trigger: CTCTAGATGTTCTGCCTTCCCAAGTCTATTCTCTGGTTGGGAGCAGTCCCCTCCGCACCACATCTTCTTATAATTCCTTGGTCCCTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS GCA 90 bp GATGCTGATCTTGGACAGGGACCAAGGAATTATAAGAAGATGTGGTaGGGAGGGGACTGCTCCCAACCAGAGAATAGACTTGGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: DADLGQGPRNYKKMW*GGDCSQPENRLGKA
Trigger: TGCCTTCCCAAGTCTATTCTCTGGTTGGGAGCAGTCCCCTCCGCACCACATCTTCTTATAATTCCTTGGTCCCTGTCCAAGATCAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CCA 90 bp GCTGATGCTGATCTTGGACAGGGACCAAGGAATTATAAGAAGATGTaGTGCGGAGGGGACTGCTCCCAACCAGAGAATAGACTTGGGAAG +
Preference number: 5 (lower is better)
Translates to: ADADLGQGPRNYKKM*CGGDCSQPENRLGK
Trigger: CTTCCCAAGTCTATTCTCTGGTTGGGAGCAGTCCCCTCCGCACCACATCTTCTTATAATTCCTTGGTCCCTGTCCAAGATCAGCATCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGATGGTTAGATTTGTGCTaGTATTTGGGGCAACATGTG +
Preference number: 5 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGWLDLC*YLGQHV
Trigger: CACATGTTGCCCCAAATACAAGCACAAATCTAACCA...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCGGAACTGGATTGTTGTaGTCTGACAACATGGGCAAC +
Preference number: 5 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPGTGLL*SDNMGN
Trigger: GTTGCCCATGTTGTCAGACAACAACAATCCAGTTCC...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGGAACTGGATTGTTGTaGTCTGACAACATGGGCAAC +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSGTGLL*SDNMGN
Trigger: GTTGCCCATGTTGTCAGACAACAACAATCCAGTTCC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGGAGGGAACTGGATTGTaGTTGTCTGACAACATGGGC +
Preference number: 5 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLEGTGL*LSDNMG
Trigger: GCCCATGTTGTCAGACAACAACAATCCAGTTCCCTC...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAAGGGAGGGAACTGGATaGTTGTTGTCTGACAACATG +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSREGTG*LLSDNM
Trigger: CATGTTGTCAGACAACAACAATCCAGTTCCCTCCCT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGACATCTAGAGAGGACTaGGAAGAGACTGGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLTSRED*EETGAD
Trigger: GTCAGCTCCAGTCTCTTCCAAGTCCTCTCTAGATGT...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGGGCTGATGCTGATCTaGGACAGGGACCAAGGAATT +
Preference number: 5 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQGLMLI*DRDQGI
Trigger: AATTCCTTGGTCCCTGTCCAAGATCAGCATCAGCCC...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCACTGGGCTTGTATTTGTaGTCCTCTTCCTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSLGLYL*SSSSSV
Trigger: CACTGATGAGGAAGAGGACAACAAATACAAGCCCAG...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGACTGGCTTAGTCTTATaGCTCAGGAGACCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQTGLVL*LRRPEA
Trigger: GGCCTCAGGTCTCCTGAGCAATAAGACTAAGCCAGT...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCTTCTCTCCTGTGAGGTaGGAGCCGCCGATGACTGCT +
Preference number: 5 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSFSPVR*EPPMTA
Trigger: AGCAGTCATCGGCGGCTCCAACCTCACAGGAGAGAA...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACAGGCTGCAGCATGCCTaGAGGAACCCTGTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: SRHRWIFMLENRKCQFADRLQHA*RNPVGR
Trigger: TCTCCCCACAGGGTTCCTCAAGGCATGCTGCAGCCT...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAATCCAGTGTAAATTGTaGAGCCTCGGGAAGACCCAA +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSIQCKL*SLGKTQ
Trigger: TTGGGTCTTCCCGAGGCTCAACAATTTACACTGGAT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAAAGAGAGCATTCAATTaGCTGCTGGCATACAAAGGA +
Preference number: 5 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGKRAFN*LLAYKG
Trigger: TCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCTT...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACAGGGTCCACGGGGGCTaGCTGGTCCATCCTAAGGCA +
Preference number: 5 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYRVHGG*LVHPKA
Trigger: TGCCTTAGGATGGACCAGCAAGCCCCCGTGGACCCT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTTTCTGTGAGTTCCTaGTCACCAGCGGCACCACAA +
Preference number: 5 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMLSVSS*SPAAPQ
Trigger: TTGTGGTGCCGCTGGTGACAAGGAACTCACAGAAAG...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGCCCAGTACCTTCTACTaGACCCAGATCCATGCAGGA +
Preference number: 5 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKPSTFY*TQIHAG
Trigger: TCCTGCATGGATCTGGGTCAAGTAGAAGGTACTGGG...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTCCCAGTACCTTCTACTaGACCCAGATCCATGCAGGA +
Preference number: 5 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSPSTFY*TQIHAG
Trigger: TCCTGCATGGATCTGGGTCAAGTAGAAGGTACTGGG...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCCGGAAAGGAAGAAGTaGGAAATGCCAAGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLPERKK*EMPSSE
Trigger: CTCAGAACTTGGCATTTCCAACTTCTTCCTTTCCGG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACGTGAGAGGAGTTGGCTaGCCCTTGTGTGGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SRHRWIFMLENRKCQFADVRGVG*PLCGWE
Trigger: CTCCCAGCCACACAAGGGCAAGCCAACTCCTCTCAC...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAATCTGCACACTACCGTaGCTGTCAACTTCCTCACTT +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSICTLP*LSTSSL
Trigger: AAGTGAGGAAGTTGACAGCAACGGTAGTGTGCAGAT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATCTGCACACTACCGTaGCTGTCAACTTCCTCACTT +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLICTLP*LSTSSL
Trigger: AAGTGAGGAAGTTGACAGCAACGGTAGTGTGCAGAT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCATTGGTCTGATGTACTaGAGTGGCAGTGGGCTAAAT +
Preference number: 5 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLIGLMY*SGSGLN
Trigger: ATTTAGCCCACTGCCACTCAAGTACATCAGACCAAT...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATCAGACCAAGACTCTaGAGCTTCATCAAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLIRPRL*SFIKAV
Trigger: CACAGCCTTGATGAAGCTCAAGAGTCTTGGTCTGAT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS TCA 90 bp GATTGTTGTTGTCTGACAACATGGGCAACACCAACATTCAGAGGCTaGGCAGTGGCCAATGTCACATGGTTAGTCAGCAAGGATGGCTGC +
Preference number: 5 (lower is better)
Translates to: DCCCLTTWATPTFRG*AVANVTWLVSKDGC
Trigger: GCAGCCATCCTTGCTGACTAACCATGTGACATTGGCCACTGCTCAGCCTCTGAATGTTGGTGTTGCCCATGTTGTCAGACAACAACAATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS GCA 90 bp CCTGGTGAGAGGAGTTGGCTTGCCCTTGTGTGGCTGGGAGGGTTTTaGTGTGGGTATAATATTTGTCGTTGCTACTCTGTCCTGAAACAT +
Preference number: 5 (lower is better)
Translates to: PGERSWLALVWLGGF*CGYNICRCYSVLKH
Trigger: ATGTTTCAGGACAGAGTAGCAACGACAAATATTATACCCACAGCAAAACCCTCCCAGCCACACAAGGGCAAGCCAACTCCTCTCACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000503968.1
ENST00000514621.5
ENST00000626993.2
CDS GCA 90 bp TGGATCAGACCAAGACTCTTGAGCTTCATCAAGGCTGTGGCCACCTaGTGCAAGATTGGTCTGATGTACTTGAGTGGCAGTGGGCTAAAT +
Preference number: 5 (lower is better)
Translates to: WIRPRLLSFIKAVAT*CKIGLMYLSGSGLN
Trigger: ATTTAGCCCACTGCCACTCAAGTACATCAGACCAATCTTGCAGCAGGTGGCCACAGCCTTGATGAAGCTCAAGAGTCTTGGTCTGATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCCAGCTCATGGTTAGATTaGTGCTTGTATTTGGGGCAA +
Preference number: 5 (lower is better)
Translates to: MFLVGCTDYLPHLGSPYSSSWLD*CLYLGQ
Trigger: TTGCCCCAAATACAAGCACAAATCTAACCATGAGCT...GGAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGGAATCCAGAATGCTTaGTTGTTGCTTGTAGTCCAG +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLGIQNA*LLLVVQ
Trigger: CTGGACTACAAGCAACAACAAAGCATTCTGGATTCC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCATGGCCTCTGGAATCATaGCTGTGGGCTGGACAGAGT +
Preference number: 5 (lower is better)
Translates to: SLFLGNCRRWASELFQVPWPLES*LWAGQS
Trigger: ACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCCA...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCTGGCCTCTGGAATCATaGCTGTGGGCTGGACAGAGT +
Preference number: 5 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSWPLES*LWAGQS
Trigger: ACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCCA...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTTGGCCTCTGGAATCATaGCTGTGGGCTGGACAGAGT +
Preference number: 5 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPWPLES*LWAGQS
Trigger: ACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCCA...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGGAGGGAACTGGATTGTaGTTGTCTGACAACATGGGC +
Preference number: 5 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMEGTGL*LSDNMG
Trigger: GCCCATGTTGTCAGACAACAACAATCCAGTTCCCTC...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGACATCTAGAGAGGACTaGGAAGAGACTGGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMTSRED*EETGAD
Trigger: GTCAGCTCCAGTCTCTTCCAAGTCCTCTCTAGATGT...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATACTGGGCTTGTATTTGTaGTCCTCTTCCTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVILGLYL*SSSSSV
Trigger: CACTGATGAGGAAGAGGACAACAAATACAAGCCCAG...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGTGGTTCTGGCTAAGATaGAGTGGTTGTGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQWFWLR*SGCAAL
Trigger: CAGTGCAGCACAACCACTCAATCTTAGCCAGAACCA...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCTTCTCTCCTGTGAGGTaGGAGCCGCCGATGACTGCT +
Preference number: 5 (lower is better)
Translates to: SEQSLFLGNCRRWASELFFSPVR*EPPMTA
Trigger: AGCAGTCATCGGCGGCTCCAACCTCACAGGAGAGAA...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACGAGCAATGGAGCTGGTaGAGCCCAGTGCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYEQWSW*SPVQQQ
Trigger: CTGCTGCTGCACTGGGCTCAACCAGCTCCATTGCTC...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGAGACCCAATGTAGGATaGGGTGGCAAACTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMRPNVG*GGKLVL
Trigger: CAACACCAGTTTGCCACCCAATCCTACATTGGGTCT...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCCCCTGCAGAACAAGTaGCTGGCTAAGAAATTTCAA +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLPLQNK*LAKKFQ
Trigger: TTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGGG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAGTGCAGGAATGGGATTaGGTTTTCTTTCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSVQEWD*VFFPAS
Trigger: AGATGCAGGAAAGAAAACCAAATCCCATTCCTGCAC...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAAATGGCCAGAACTGTTaGAAATGGAGTTCTTATTCC +
Preference number: 5 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGNGQNC*KWSSYS
Trigger: GGAATAAGAACTCCATTTCAAACAGTTCTGGCCATT...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGATCTGCACACTACCGTaGCTGTCAACTTCCTCACTT +
Preference number: 5 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLICTLP*LSTSSL
Trigger: AAGTGAGGAAGTTGACAGCAACGGTAGTGTGCAGAT...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCACACCACAGTCCTGTTTaGCAGCATGAGAGGGGGATG +
Preference number: 5 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAHHSPV*QHERGM
Trigger: CATCCCCCTCTCATGCTGCAAAACAGGACTGTGGTG...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCACACCACAGTCCTGTTTaGCAGCATGAGAGGGGGATG +
Preference number: 5 (lower is better)
Translates to: SLFLGNCRRWASELFQVPHHSPV*QHERGM
Trigger: CATCCCCCTCTCATGCTGCAAAACAGGACTGTGGTG...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGTGGAACTGCTACTCTTaGTGGTCACAGTGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQWNCYS*WSQWWL
Trigger: CAACCACCACTGTGACCACAAAGAGTAGCAGTTCCA...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGATAGCCACAATTTCCTaGGTGCTCCTCTTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKIATIS*VLLFQH
Trigger: GTGCTGGAAGAGGAGCACCAAGGAAATTGTGGCTAT...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAATTGGTCTGATGTACTaGAGTGGCAGTGGGCTAAAT +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSIGLMY*SGSGLN
Trigger: ATTTAGCCCACTGCCACTCAAGTACATCAGACCAAT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAATCAGACCAAGACTCTaGAGCTTCATCAAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIIRPRL*SFIKAV
Trigger: CACAGCCTTGATGAAGCTCAAGAGTCTTGGTCTGAT...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS TCA 90 bp ACTGCTTATTCTTCTTCGAAGGGAGGGAACTGGATTGTTGTTGTCTaGCAACATGGGCAACACCAACATTCAGAGGCTGAGCAGTGGCCA +
Preference number: 5 (lower is better)
Translates to: TAYSSSKGGNWIVVV*QHGQHQHSEAEQWP
Trigger: TGGCCACTGCTCAGCCTCTGAATGTTGGTGTTGCCCATGTTGTCAGACAACAACAATCCAGTTCCCTCCCTTCGAAGAAGAATAAGCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS GCA 90 bp ATCAGACCAAGACTCTTGAGCTTCATCAAGGCTGTGGCCACCTGCTaGAAGATTGGTCTGATGTACTTGAGTGGCAGTGGGCTAAATTTG +
Preference number: 5 (lower is better)
Translates to: IRPRLLSFIKAVATC*KIGLMYLSGSGLNL
Trigger: CAAATTTAGCCCACTGCCACTCAAGTACATCAGACCAATCTTGCAGCAGGTGGCCACAGCCTTGATGAAGCTCAAGAGTCTTGGTCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CCA 90 bp CCAAAACGGATCCACTATTGCCTCGGAGAGCACTCAGGGTATCAGTaGAATAAGGGCTGCTCAAAGAAGAGTCAGAGTCTGGAGAATCAT +
Preference number: 5 (lower is better)
Translates to: PKRIHYCLGEHSGYQ*NKGCSKKSQSLENH
Trigger: ATGATTCTCCAGACTCTGACTCTTCTTTGAGCAGCCCTTATTCCACTGATACCCTGAGTGCTCTCCGAGGCAATAGTGGATCCGTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTGGTTAGATTTGTGCTaGTATTTGGGGCAACATGTG +
Preference number: 5 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPWLDLC*YLGQHV
Trigger: CACATGTTGCCCCAAATACAAGCACAAATCTAACCA...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCAGCTCATGGTTAGATTaGTGCTTGTATTTGGGGCAA +
Preference number: 5 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPSSWLD*CLYLGQ
Trigger: TTGCCCCAAATACAAGCACAAATCTAACCATGAGCT...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAGGAATCCAGAATGCTTaGTTGTTGCTTGTAGTCCAG +
Preference number: 5 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIGIQNA*LLLVVQ
Trigger: CTGGACTACAAGCAACAACAAAGCATTCTGGATTCC...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATGTGATGGTGGCTACTaGAGGGTGGAGAGTTGCTAC +
Preference number: 5 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWACDGGY*RVESCY
Trigger: GTAGCAACTCTCCACCCTCAAGTAGCCACCATCACA...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000426820.7
CDS-3UTR CAA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCTGTGATGGTGGCTACTaGAGGGTGGAGAGTTGCTAC +
Preference number: 5 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGCDGGY*RVESCY
Trigger: GTAGCAACTCTCCACCCTCAAGTAGCCACCATCACA...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000426820.7
CDS-3UTR CAA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGAGGGAGGGAACTGGATaGTTGTTGTCTGACAACATG +
Preference number: 5 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMREGTG*LLSDNM
Trigger: CATGTTGTCAGACAACAACAATCCAGTTCCCTCCCT...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTGGGCTGATGCTGATCTaGGACAGGGACCAAGGAATT +
Preference number: 5 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLGLMLI*DRDQGI
Trigger: AATTCCTTGGTCCCTGTCCAAGATCAGCATCAGCCC...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTGGGCTGATGCTGATCTaGGACAGGGACCAAGGAATT +
Preference number: 5 (lower is better)
Translates to: QWRHQSISGITLEDHIHTGLMLI*DRDQGI
Trigger: AATTCCTTGGTCCCTGTCCAAGATCAGCATCAGCCC...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAGGGCTGATGCTGATCTaGGACAGGGACCAAGGAATT +
Preference number: 5 (lower is better)
Translates to: SLFLGNCRRWASELFQVPGLMLI*DRDQGI
Trigger: AATTCCTTGGTCCCTGTCCAAGATCAGCATCAGCCC...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTGGGCTTGTATTTGTaGTCCTCTTCCTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMLGLYL*SSSSSV
Trigger: CACTGATGAGGAAGAGGACAACAAATACAAGCCCAG...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTAAAACGGATCCACTATaGCCTCGGAGAGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLKTDPL*PRRALR
Trigger: CCTGAGTGCTCTCCGAGGCAATAGTGGATCCGTTTT...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCAAAACGGATCCACTATaGCCTCGGAGAGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGKTDPL*PRRALR
Trigger: CCTGAGTGCTCTCCGAGGCAATAGTGGATCCGTTTT...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAACTGGCTTAGTCTTATaGCTCAGGAGACCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWATGLVL*LRRPEA
Trigger: GGCCTCAGGTCTCCTGAGCAATAAGACTAAGCCAGT...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACTTCTCTCCTGTGAGGTaGGAGCCGCCGATGACTGCT +
Preference number: 5 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYFSPVR*EPPMTA
Trigger: AGCAGTCATCGGCGGCTCCAACCTCACAGGAGAGAA...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAGAGCAATGGAGCTGGTaGAGCCCAGTGCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLREQWSW*SPVQQQ
Trigger: CTGCTGCTGCACTGGGCTCAACCAGCTCCATTGCTC...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGATCCAGTGTAAATTGTaGAGCCTCGGGAAGACCCAA +
Preference number: 5 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQIQCKL*SLGKTQ
Trigger: TTGGGTCTTCCCGAGGCTCAACAATTTACACTGGAT...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATACCCCTGCAGAACAAGTaGCTGGCTAAGAAATTTCAA +
Preference number: 5 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIPLQNK*LAKKFQ
Trigger: TTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGGG...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp GCCCAGAGTGGCTACACTGAACCCTTCTCCGCTTCTTCTCTCACCCGGAAAGGAAAAATCAGAATGTGCTaGGCAAAAAGGAGACACAAA +
Preference number: 5 (lower is better)
Translates to: AQSGYTEPFSASSLTRKGKIRMC*AKRRHK
Trigger: TTTGTGTCTCCTTTTTGCCAAGCACATTCTGATTTT...TCCTTTCCGGGTGAGAGAAGAAGCGGAGAAGGGTTCAGTGTAGCCACTCTGGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAGTGCAGGAATGGGATTaGGTTTTCTTTCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIVQEWD*VFFPAS
Trigger: AGATGCAGGAAAGAAAACCAAATCCCATTCCTGCAC...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCCGGAAAGGAAGAAGTaGGAAATGCCAAGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMPERKK*EMPSSE
Trigger: CTCAGAACTTGGCATTTCCAACTTCTTCCTTTCCGG...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGCCGGAAAGGAAGAAGTaGGAAATGCCAAGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQPERKK*EMPSSE
Trigger: CTCAGAACTTGGCATTTCCAACTTCTTCCTTTCCGG...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGTTCTTATTCCTGGGGTaGGTATTTCAGCTGAGCACT +
Preference number: 5 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLFLFLG*VFQLST
Trigger: AGTGCTCAGCTGAAATACCAACCCCAGGAATAAGAA...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CATGTTCCTGGTAGGCTGTACGGACTACCTGCCCCATCTTGGAAGCCCTTACTCAATGGCCAGAACTGTTaGAAATGGAGTTCTTATTCC +
Preference number: 5 (lower is better)
Translates to: HVPGRLYGLPAPSWKPLLNGQNC*KWSSYS
Trigger: GGAATAAGAACTCCATTTCAAACAGTTCTGGCCATT...GAGTAAGGGCTTCCAAGATGGGGCAGGTAGTCCGTACAGCCTACCAGGAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCACCACAGTCCTGTTTaGCAGCATGAGAGGGGGATG +
Preference number: 5 (lower is better)
Translates to: SEQSLFLGNCRRWASELFHHSPV*QHERGM
Trigger: CATCCCCCTCTCATGCTGCAAAACAGGACTGTGGTG...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS GCA 90 bp CTTGTGTGGCTGGGAGGGTTTTGCTGTGGGTATAATATTTGTCGTTaGTACTCTGTCCTGAAACATCCCAGCCAGAGGGCTCTATTTTCA +
Preference number: 5 (lower is better)
Translates to: LVWLGGFCCGYNICR*YSVLKHPSQRALFS
Trigger: TGAAAATAGAGCCCTCTGGCTGGGATGTTTCAGGACAGAGTAGCAACGACAAATATTATACCCACAGCAAAACCCTCCCAGCCACACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000503968.1
ENST00000514621.5
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCACTTCCGAGCTTCTTTaGATTTTATTCCAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPTSELL*ILFQSP
Trigger: TGGAGACTGGAATAAAATCAAAAGAAGCTCGGAAGT...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAACTTCCGAGCTTCTTTaGATTTTATTCCAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSTSELL*ILFQSP
Trigger: TGGAGACTGGAATAAAATCAAAAGAAGCTCGGAAGT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGGTTAGATTTGTGCTaGTATTTGGGGCAACATGTG +
Preference number: 5 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIWLDLC*YLGQHV
Trigger: CACATGTTGCCCCAAATACAAGCACAAATCTAACCA...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCCAGAATGCTTTGTTGTaGCTTGTAGTCCAGTTTGAA +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLQNALL*LVVQFE
Trigger: TTCAAACTGGACTACAAGCAACAACAAAGCATTCTG...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCATCCAGAATGCTTTGTaGTTGCTTGTAGTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPIQNAL*LLVVQF
Trigger: AAACTGGACTACAAGCAACAACAAAGCATTCTGGAT...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAATCCAGAATGCTTTGTaGTTGCTTGTAGTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSIQNAL*LLVVQF
Trigger: AAACTGGACTACAAGCAACAACAAAGCATTCTGGAT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGGAATCCAGAATGCTTaGTTGTTGCTTGTAGTCCAG +
Preference number: 5 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKGIQNA*LLLVVQ
Trigger: CTGGACTACAAGCAACAACAAAGCATTCTGGATTCC...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTGGAATCCAGAATGCTTaGTTGTTGCTTGTAGTCCAG +
Preference number: 5 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSGIQNA*LLLVVQ
Trigger: CTGGACTACAAGCAACAACAAAGCATTCTGGATTCC...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACTGGCCTCTGGAATCATaGCTGTGGGCTGGACAGAGT +
Preference number: 5 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYWPLES*LWAGQS
Trigger: ACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCCA...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAGAGGGAACTGGATTGTaGTTGTCTGACAACATGGGC +
Preference number: 5 (lower is better)
Translates to: SLFLGNCRRWASELFQVPEGTGL*LSDNMG
Trigger: GCCCATGTTGTCAGACAACAACAATCCAGTTCCCTC...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTGAGGGAACTGGATTGTaGTTGTCTGACAACATGGGC +
Preference number: 5 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLEGTGL*LSDNMG
Trigger: GCCCATGTTGTCAGACAACAACAATCCAGTTCCCTC...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAGAGGGAACTGGATTGTaGTTGTCTGACAACATGGGC +
Preference number: 5 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAEGTGL*LSDNMG
Trigger: GCCCATGTTGTCAGACAACAACAATCCAGTTCCCTC...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTACATCTAGAGAGGACTaGGAAGAGACTGGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLTSRED*EETGAD
Trigger: GTCAGCTCCAGTCTCTTCCAAGTCCTCTCTAGATGT...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTACATCTAGAGAGGACTaGGAAGAGACTGGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: QWRHQSISGITLEDHIHTTSRED*EETGAD
Trigger: GTCAGCTCCAGTCTCTTCCAAGTCCTCTCTAGATGT...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCGGGCTGATGCTGATCTaGGACAGGGACCAAGGAATT +
Preference number: 5 (lower is better)
Translates to: SEQSLFLGNCRRWASELFGLMLI*DRDQGI
Trigger: AATTCCTTGGTCCCTGTCCAAGATCAGCATCAGCCC...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTCCAGAGCTACTGGGCTaGTATTTGTTGTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLPELLG*YLLSSS
Trigger: GGAAGAGGACAACAAATACAAGCCCAGTAGCTCTGG...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACAAAACGGATCCACTATaGCCTCGGAGAGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: SRHRWIFMLENRKCQFADKTDPL*PRRALR
Trigger: CCTGAGTGCTCTCCGAGGCAATAGTGGATCCGTTTT...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCTGGTTCTGGCTAAGATaGAGTGGTTGTGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGWFWLR*SGCAAL
Trigger: CAGTGCAGCACAACCACTCAATCTTAGCCAGAACCA...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATGGTTCTGGCTAAGATaGAGTGGTTGTGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAWFWLR*SGCAAL
Trigger: CAGTGCAGCACAACCACTCAATCTTAGCCAGAACCA...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGATTCTCTCCTGTGAGGTaGGAGCCGCCGATGACTGCT +
Preference number: 5 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRFSPVR*EPPMTA
Trigger: AGCAGTCATCGGCGGCTCCAACCTCACAGGAGAGAA...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTAGACCCAATGTAGGATaGGGTGGCAAACTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLRPNVG*GGKLVL
Trigger: CAACACCAGTTTGCCACCCAATCCTACATTGGGTCT...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAGGTATCCAGTGTAAATaGTTGAGCCTCGGGAAGACC +
Preference number: 5 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAGIQCK*LSLGKT
Trigger: GGTCTTCCCGAGGCTCAACAATTTACACTGGATACC...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAAAGGGTCTCCTCTCCTaGCAGGCAATGCCCCTGCTC +
Preference number: 5 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRKGLLS*QAMPLL
Trigger: GAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCTT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCATATTTAATATTGGCTaGACTCCTCTCACCTGCTTC +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLIFNIG*TPLTCF
Trigger: GAAGCAGGTGAGAGGAGTCAAGCCAATATTAAATAT...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCCCAGTACCTTCTACTaGACCCAGATCCATGCAGGA +
Preference number: 5 (lower is better)
Translates to: SEQSLFLGNCRRWASELFPSTFY*TQIHAG
Trigger: TCCTGCATGGATCTGGGTCAAGTAGAAGGTACTGGG...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGGAAACTCCAAATACTTaGACAGCTCCTCGGTGTTCA +
Preference number: 5 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMETPNT*TAPRCS
Trigger: TGAACACCGAGGAGCTGTCAAAGTATTTGGAGTTTC...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCCCAATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCAACTGCTTGGCTATCTaGACCAATATAGTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: SPILRTQGQEKVAMIPPPNCLAI*TNIVLK
Trigger: TTTCAGCACTATATTGGTCAAGATAGCCAAGCAGTT...GGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATTGGGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGTGCAGGAATGGGATTaGGTTTTCTTTCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQVQEWD*VFFPAS
Trigger: AGATGCAGGAAAGAAAACCAAATCCCATTCCTGCAC...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCAATCGGAAATGCCAGTTaGCAGACTAAGACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: LRTQGQEKVAMIPPPSCSIGNAS*QTKTEK
Trigger: TTTTTCAGTCTTAGTCTGCAAACTGGCATTTCCGAT...TGAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATGGAACTGCTACTCTTaGTGGTCACAGTGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAWNCYS*WSQWWL
Trigger: CAACCACCACTGTGACCACAAAGAGTAGCAGTTCCA...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAATAGCCACAATTTCCTaGGTGCTCCTCTTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: SLFLGNCRRWASELFQVPIATIS*VLLFQH
Trigger: GTGCTGGAAGAGGAGCACCAAGGAAATTGTGGCTAT...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AATATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGATTGGTCTGATGTACTaGAGTGGCAGTGGGCTAAAT +
Preference number: 5 (lower is better)
Translates to: NIKNAGPGEGSHDSSSLMIGLMY*SGSGLN
Trigger: ATTTAGCCCACTGCCACTCAAGTACATCAGACCAAT...CATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAATATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS CCA 90 bp TCCAGTTTGAAACGCAGGTGGACATACTATAAATGTCTGTTGGAATaGATCTGTCTGAGTGCAAATCTGGGTGGTTCCAGGCTGCAAGGA +
Preference number: 5 (lower is better)
Translates to: SSLKRRWTYYKCLLE*ICLSANLGGSRLQG
Trigger: TCCTTGCAGCCTGGAACCACCCAGATTTGCACTCAGACAGATCCATTCCAACAGACATTTATAGTATGTCCACCTGCGTTTCAAACTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAACTTCCGAGCTTCTTTaGATTTTATTCCAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVITSELL*ILFQSP
Trigger: TGGAGACTGGAATAAAATCAAAAGAAGCTCGGAAGT...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCTACTATAAATGTCTGTaGGAATGGATCTGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLYYKCL*EWICLS
Trigger: ACTCAGACAGATCCATTCCAACAGACATTTATAGTA...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAATCCAGAATGCTTTGTaGTTGCTTGTAGTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIIQNAL*LLVVQF
Trigger: AAACTGGACTACAAGCAACAACAAAGCATTCTGGAT...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCTTGAGGGTGGAGAGTaGCTACCATTAGTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: SEQSLFLGNCRRWASELFLEGGE*LPLVVY
Trigger: GTACACCACTAATGGTAGCAACTCTCCACCCTCAAG...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000426820.7
CDS-3UTR CAA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCGGAACTGGATTGTTGTaGTCTGACAACATGGGCAAC +
Preference number: 5 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGGTGLL*SDNMGN
Trigger: GTTGCCCATGTTGTCAGACAACAACAATCCAGTTCC...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTAGGGAGGGAACTGGATaGTTGTTGTCTGACAACATG +
Preference number: 5 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLREGTG*LLSDNM
Trigger: CATGTTGTCAGACAACAACAATCCAGTTCCCTCCCT...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAGGGAGGGAACTGGATaGTTGTTGTCTGACAACATG +
Preference number: 5 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSREGTG*LLSDNM
Trigger: CATGTTGTCAGACAACAACAATCCAGTTCCCTCCCT...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCACTGGGCTTGTATTTGTaGTCCTCTTCCTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: SLFLGNCRRWASELFQVPLGLYL*SSSSSV
Trigger: CACTGATGAGGAAGAGGACAACAAATACAAGCCCAG...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACAAAACGGATCCACTATaGCCTCGGAGAGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYKTDPL*PRRALR
Trigger: CCTGAGTGCTCTCCGAGGCAATAGTGGATCCGTTTT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCAGACCCAATGTAGGATaGGGTGGCAAACTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: SEQSLFLGNCRRWASELFRPNVG*GGKLVL
Trigger: CAACACCAGTTTGCCACCCAATCCTACATTGGGTCT...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AATCCTGTTCTGATAAATCCCGGTGAACAACTTAGGGTCCACGGGGGCTTGCTGAAAATAGGGCAAACTTaGGGAAGACTACAACAATGC +
Preference number: 5 (lower is better)
Translates to: NPVLINPGEQLRVHGGLLKIGQT*GRLQQC
Trigger: GCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTT...CAGCAAGCCCCCGTGGACCCTAAGTTGTTCACCGGGATTTATCAGAACAGGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATATGCTCTAAGAGAGCATTCAATTaGCTGCTGGCATACAAAGGA +
Preference number: 5 (lower is better)
Translates to: SSPCRQCPCSFSTTVICSKRAFN*LLAYKG
Trigger: TCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCTT...AGAGCATATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGAAGAGAGCATTCAATTaGCTGCTGGCATACAAAGGA +
Preference number: 5 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQKRAFN*LLAYKG
Trigger: TCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCTT...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCCATCCTGCACCTCCTaGACACCATCTCTATCTACA +
Preference number: 5 (lower is better)
Translates to: SEQSLFLGNCRRWASELFPSCTS*TPSLST
Trigger: TGTAGATAGAGATGGTGTCAAGGAGGTGCAGGATGG...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAAACTGCTTGGCTATCTaGACCAATATAGTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVINCLAI*TNIVLK
Trigger: TTTCAGCACTATATTGGTCAAGATAGCCAAGCAGTT...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTCCGGAAAGGAAGAAGTaGGAAATGCCAAGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLPERKK*EMPSSE
Trigger: CTCAGAACTTGGCATTTCCAACTTCTTCCTTTCCGG...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTCCGGAAAGGAAGAAGTaGGAAATGCCAAGTTCTGAG +
Preference number: 5 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPPERKK*EMPSSE
Trigger: CTCAGAACTTGGCATTTCCAACTTCTTCCTTTCCGG...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTATCTGCACACTACCGTaGCTGTCAACTTCCTCACTT +
Preference number: 5 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPICTLP*LSTSSL
Trigger: AAGTGAGGAAGTTGACAGCAACGGTAGTGTGCAGAT...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTAAGAACGCAGGGCCAGGAGAAGGTAGCCATGATTCCTCCTCCCTCATGCTCGGCAGTGGGCTAAATTaGTTTTGCTTTAGAAAATCA +
Preference number: 5 (lower is better)
Translates to: IKNAGPGEGSHDSSSLMLGSGLN*FCFRKS
Trigger: TGATTTTCTAAAGCAAAACAAATTTAGCCCACTGCC...GAGCATGAGGGAGGAGGAATCATGGCTACCTTCTCCTGGCCCTGCGTTCTTAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCATCAGACCAAGACTCTaGAGCTTCATCAAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGIRPRL*SFIKAV
Trigger: CACAGCCTTGATGAAGCTCAAGAGTCTTGGTCTGAT...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGCAGAATGCTTTGTTGTaGCTTGTAGTCCAGTTTGAA +
Preference number: 5 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKQNALL*LVVQFE
Trigger: TTCAAACTGGACTACAAGCAACAACAAAGCATTCTG...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGATCCAGAATGCTTTGTaGTTGCTTGTAGTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQIQNAL*LLVVQF
Trigger: AAACTGGACTACAAGCAACAACAAAGCATTCTGGAT...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAGGAATCCAGAATGCTTaGTTGTTGCTTGTAGTCCAG +
Preference number: 5 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAGIQNA*LLLVVQ
Trigger: CTGGACTACAAGCAACAACAAAGCATTCTGGATTCC...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGCCTCTGGAATCATaGCTGTGGGCTGGACAGAGT +
Preference number: 5 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRWPLES*LWAGQS
Trigger: ACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCCA...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACGAGGGAACTGGATTGTaGTTGTCTGACAACATGGGC +
Preference number: 5 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYEGTGL*LSDNMG
Trigger: GCCCATGTTGTCAGACAACAACAATCCAGTTCCCTC...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCTGGGCTTGTATTTGTaGTCCTCTTCCTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: SEQSLFLGNCRRWASELFLGLYL*SSSSSV
Trigger: CACTGATGAGGAAGAGGACAACAAATACAAGCCCAG...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACCCAGAGCTACTGGGCTaGTATTTGTTGTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYPELLG*YLLSSS
Trigger: GGAAGAGGACAACAAATACAAGCCCAGTAGCTCTGG...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACGAGCAATGGAGCTGGTaGAGCCCAGTGCAGCAGCAG +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHEQWSW*SPVQQQ
Trigger: CTGCTGCTGCACTGGGCTCAACCAGCTCCATTGCTC...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACAGGCTGCAGCATGCCTaGAGGAACCCTGTGGGGAGA +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHRLQHA*RNPVGR
Trigger: TCTCCCCACAGGGTTCCTCAAGGCATGCTGCAGCCT...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCATCCAGTGTAAATTGTaGAGCCTCGGGAAGACCCAA +
Preference number: 5 (lower is better)
Translates to: SEQSLFLGNCRRWASELFIQCKL*SLGKTQ
Trigger: TTGGGTCTTCCCGAGGCTCAACAATTTACACTGGAT...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGACCCAGTACCTTCTACTaGACCCAGATCCATGCAGGA +
Preference number: 5 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRPSTFY*TQIHAG
Trigger: TCCTGCATGGATCTGGGTCAAGTAGAAGGTACTGGG...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTGAAACTCCAAATACTTaGACAGCTCCTCGGTGTTCA +
Preference number: 5 (lower is better)
Translates to: QWRHQSISGITLEDHIHTETPNT*TAPRCS
Trigger: TGAACACCGAGGAGCTGTCAAAGTATTTGGAGTTTC...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAGAAACTCCAAATACTTaGACAGCTCCTCGGTGTTCA +
Preference number: 5 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAETPNT*TAPRCS
Trigger: TGAACACCGAGGAGCTGTCAAAGTATTTGGAGTTTC...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTGAAACTCCAAATACTTaGACAGCTCCTCGGTGTTCA +
Preference number: 5 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLETPNT*TAPRCS
Trigger: TGAACACCGAGGAGCTGTCAAAGTATTTGGAGTTTC...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp GGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGGAGAAGAACTGCTTGGCTATCTaGACCAATATAGTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: GKGGSLHSPILRTQGQEKNCLAI*TNIVLK
Trigger: TTTCAGCACTATATTGGTCAAGATAGCCAAGCAGTT...CTTCTCCTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTGTGCAGGAATGGGATTaGGTTTTCTTTCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPVQEWD*VFFPAS
Trigger: AGATGCAGGAAAGAAAACCAAATCCCATTCCTGCAC...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAGTGCAGGAATGGGATTaGGTTTTCTTTCCTGCATCT +
Preference number: 5 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAVQEWD*VFFPAS
Trigger: AGATGCAGGAAAGAAAACCAAATCCCATTCCTGCAC...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCTTCTTATTCCTGGGGTaGGTATTTCAGCTGAGCACT +
Preference number: 5 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGFLFLG*VFQLST
Trigger: AGTGCTCAGCTGAAATACCAACCCCAGGAATAAGAA...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTTTCTTATTCCTGGGGTaGGTATTTCAGCTGAGCACT +
Preference number: 5 (lower is better)
Translates to: QWRHQSISGITLEDHIHTFLFLG*VFQLST
Trigger: AGTGCTCAGCTGAAATACCAACCCCAGGAATAAGAA...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCCAGAATGGCCAGAACTGTTaGAAATGGAGTTCTTATTCC +
Preference number: 5 (lower is better)
Translates to: QEGKGGSLHSPILRTQGQNGQNC*KWSSYS
Trigger: GGAATAAGAACTCCATTTCAAACAGTTCTGGCCATT...CTGGCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACATCTGCACACTACCGTaGCTGTCAACTTCCTCACTT +
Preference number: 5 (lower is better)
Translates to: SRHRWIFMLENRKCQFADICTLP*LSTSSL
Trigger: AAGTGAGGAAGTTGACAGCAACGGTAGTGTGCAGAT...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGGGTCTCCTCTCCTTGCAGGCAATGCCCCTGCTCATTCAGCACTACAGTAATAGGCAGTGGGCTAAATTaGTTTTGCTTTAGAAAATCA +
Preference number: 5 (lower is better)
Translates to: RVSSPCRQCPCSFSTTVIGSGLN*FCFRKS
Trigger: TGATTTTCTAAAGCAAAACAAATTTAGCCCACTGCC...TATTACTGTAGTGCTGAATGAGCAGGGGCATTGCCTGCAAGGAGAGGAGACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTATTGGTCTGATGTACTaGAGTGGCAGTGGGCTAAAT +
Preference number: 5 (lower is better)
Translates to: QWRHQSISGITLEDHIHTIGLMY*SGSGLN
Trigger: ATTTAGCCCACTGCCACTCAAGTACATCAGACCAAT...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCATCAGACCAAGACTCTaGAGCTTCATCAAGGCTGTG +
Preference number: 5 (lower is better)
Translates to: SEQSLFLGNCRRWASELFIRPRL*SFIKAV
Trigger: CACAGCCTTGATGAAGCTCAAGAGTCTTGGTCTGAT...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCTGGTTAGATTTGTGCTaGTATTTGGGGCAACATGTG +
Preference number: 5 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGWLDLC*YLGQHV
Trigger: CACATGTTGCCCCAAATACAAGCACAAATCTAACCA...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAAGCTCATGGTTAGATTaGTGCTTGTATTTGGGGCAA +
Preference number: 5 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWASSWLD*CLYLGQ
Trigger: TTGCCCCAAATACAAGCACAAATCTAACCATGAGCT...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACGGAACTGGATTGTTGTaGTCTGACAACATGGGCAAC +
Preference number: 5 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYGTGLL*SDNMGN
Trigger: GTTGCCCATGTTGTCAGACAACAACAATCCAGTTCC...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAACATCTAGAGAGGACTaGGAAGAGACTGGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRTSRED*EETGAD
Trigger: GTCAGCTCCAGTCTCTTCCAAGTCCTCTCTAGATGT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAACTGGCTTAGTCTTATaGCTCAGGAGACCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRTGLVL*LRRPEA
Trigger: GGCCTCAGGTCTCCTGAGCAATAAGACTAAGCCAGT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAAGACCCAATGTAGGATaGGGTGGCAAACTGGTGTTG +
Preference number: 5 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRRPNVG*GGKLVL
Trigger: CAACACCAGTTTGCCACCCAATCCTACATTGGGTCT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGAGAGCATTCAATTaGCTGCTGGCATACAAAGGA +
Preference number: 5 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSKRAFN*LLAYKG
Trigger: TCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCTT...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS CCA 90 bp GCTGTCAACTTCCTCACTTTTTCGTTTCAATCCACATTTTTGATATaGCTCAAGCAAAGAAACGTTGCTTCTGTGAGTCAGGGTCTGGCT +
Preference number: 5 (lower is better)
Translates to: AVNFLTFSFQSTFLI*LKQRNVASVSQGLA
Trigger: AGCCAGACCCTGACTCACAGAAGCAACGTTTCTTTGCTTGAGCCATATCAAAAATGTGGATTGAAACGAAAAAGTGAGGAAGTTGACAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAACTTCCGAGCTTCTTTaGATTTTATTCCAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: SLFLGNCRRWASELFQVPTSELL*ILFQSP
Trigger: TGGAGACTGGAATAAAATCAAAAGAAGCTCGGAAGT...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCCAGAATGCTTTGTTGTaGCTTGTAGTCCAGTTTGAA +
Preference number: 5 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSQNALL*LVVQFE
Trigger: TTCAAACTGGACTACAAGCAACAACAAAGCATTCTG...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACAACAATGCAGTCAACACTGAGACAGGTTCCCCCAGAGAAAAACCTTCTGCTTCAGAATGCTTTGTTGTaGCTTGTAGTCCAGTTTGAA +
Preference number: 5 (lower is better)
Translates to: TTMQSTLRQVPPEKNLLLQNALL*LVVQFE
Trigger: TTCAAACTGGACTACAAGCAACAACAAAGCATTCTG...AAGCAGAAGGTTTTTCTCTGGGGGAACCTGTCTCAGTGTTGACTGCATTGTTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCACAGAATGCTTTGTTGTaGCTTGTAGTCCAGTTTGAA +
Preference number: 5 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAQNALL*LVVQFE
Trigger: TTCAAACTGGACTACAAGCAACAACAAAGCATTCTG...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAATCCAGAATGCTTTGTaGTTGCTTGTAGTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: SLFLGNCRRWASELFQVPIQNAL*LLVVQF
Trigger: AAACTGGACTACAAGCAACAACAAAGCATTCTGGAT...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCATCCAGAATGCTTTGTaGTTGCTTGTAGTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSIQNAL*LLVVQF
Trigger: AAACTGGACTACAAGCAACAACAAAGCATTCTGGAT...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAAGGGAGGGAACTGGATaGTTGTTGTCTGACAACATG +
Preference number: 5 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRREGTG*LLSDNM
Trigger: CATGTTGTCAGACAACAACAATCCAGTTCCCTCCCT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAACATCTAGAGAGGACTaGGAAGAGACTGGAGCTGAC +
Preference number: 5 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRTSRED*EETGAD
Trigger: GTCAGCTCCAGTCTCTTCCAAGTCCTCTCTAGATGT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGACTGGGCTTGTATTTGTaGTCCTCTTCCTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRLGLYL*SSSSSV
Trigger: CACTGATGAGGAAGAGGACAACAAATACAAGCCCAG...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAAAAACGGATCCACTATaGCCTCGGAGAGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: REHSICCWHTKEATLKYKKTDPL*PRRALR
Trigger: CCTGAGTGCTCTCCGAGGCAATAGTGGATCCGTTTT...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
43% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAATCCAGTGTAAATTGTaGAGCCTCGGGAAGACCCAA +
Preference number: 5 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRIQCKL*SLGKTQ
Trigger: TTGGGTCTTCCCGAGGCTCAACAATTTACACTGGAT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAAAAATAGGGCAAACTTaGGGAAGACTACAACAATGC +
Preference number: 5 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAKIGQT*GRLQQC
Trigger: GCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTT...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTATATTTAATATTGGCTaGACTCCTCTCACCTGCTTC +
Preference number: 5 (lower is better)
Translates to: QWRHQSISGITLEDHIHTIFNIG*TPLTCF
Trigger: GAAGCAGGTGAGAGGAGTCAAGCCAATATTAAATAT...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAATATTTAATATTGGCTaGACTCCTCTCACCTGCTTC +
Preference number: 5 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAIFNIG*TPLTCF
Trigger: GAAGCAGGTGAGAGGAGTCAAGCCAATATTAAATAT...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAACTTTCTGTGAGTTCCTaGTCACCAGCGGCACCACAA +
Preference number: 5 (lower is better)
Translates to: REHSICCWHTKEATLKYKLSVSS*SPAAPQ
Trigger: TTGTGGTGCCGCTGGTGACAAGGAACTCACAGAAAG...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACTGAAAAACTCCTCACCAGACACACCTGTGCAAAACAATTCCAAGGGTCTCCTATGACTCAACAGGCTTaGGTTCCTTCTCTATATTCT +
Preference number: 5 (lower is better)
Translates to: TEKLLTRHTCAKQFQGSPMTQQA*VPSLYS
Trigger: AGAATATAGAGAAGGAACCAAAGCCTGTTGAGTCAT...AGGAGACCCTTGGAATTGTTTTGCACAGGTGTGTCTGGTGAGGAGTTTTTCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TTTCAAGAGGGTAAAGGAGGATCTCTCCATAGCCCAATATTAAGAACGCAGGGCATGACTCAACAGGCTTaGGTTCCTTCTCTATATTCT +
Preference number: 5 (lower is better)
Translates to: FQEGKGGSLHSPILRTQGMTQQA*VPSLYS
Trigger: AGAATATAGAGAAGGAACCAAAGCCTGTTGAGTCAT...GCCCTGCGTTCTTAATATTGGGCTATGGAGAGATCCTCCTTTACCCTCTTGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGACCATCCTGCACCTCCTaGACACCATCTCTATCTACA +
Preference number: 5 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRPSCTS*TPSLST
Trigger: TGTAGATAGAGATGGTGTCAAGGAGGTGCAGGATGG...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAAGTGGTATCTGCTTATaGGACTGGGGTGCAGGAATG +
Preference number: 5 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRSGICL*DWGAGM
Trigger: CATTCCTGCACCCCAGTCCAATAAGCAGATACCACT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACTGGTTAGATTTGTGCTaGTATTTGGGGCAACATGTG +
Preference number: 5 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYWLDLC*YLGQHV
Trigger: CACATGTTGCCCCAAATACAAGCACAAATCTAACCA...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACAGCTCATGGTTAGATTaGTGCTTGTATTTGGGGCAA +
Preference number: 5 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYSSWLD*CLYLGQ
Trigger: TTGCCCCAAATACAAGCACAAATCTAACCATGAGCT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAATGGAGACATCAATCCATCTCCGGGATAACACTGGAGGATCACATACACACTTACTATAAATGTCTGTaGGAATGGATCTGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: QWRHQSISGITLEDHIHTYYKCL*EWICLS
Trigger: ACTCAGACAGATCCATTCCAACAGACATTTATAGTA...AGTGTGTATGTGATCCTCCAGTGTTATCCCGGAGATGGATTGATGTCTCCATTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAACTTGAGGGTGGAGAGTaGCTACCATTAGTGGTGTAC +
Preference number: 5 (lower is better)
Translates to: REHSICCWHTKEATLKYKLEGGE*LPLVVY
Trigger: GTACACCACTAATGGTAGCAACTCTCCACCCTCAAG...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACTGTGATGGTGGCTACTaGAGGGTGGAGAGTTGCTAC +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHCDGGY*RVESCY
Trigger: GTAGCAACTCTCCACCCTCAAGTAGCCACCATCACA...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000426820.7
CDS-3UTR CAA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAGGAACTGGATTGTTGTaGTCTGACAACATGGGCAAC +
Preference number: 5 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRGTGLL*SDNMGN
Trigger: GTTGCCCATGTTGTCAGACAACAACAATCCAGTTCC...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAAGGGAGGGAACTGGATaGTTGTTGTCTGACAACATG +
Preference number: 5 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRREGTG*LLSDNM
Trigger: CATGTTGTCAGACAACAACAATCCAGTTCCCTCCCT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACAAAACGGATCCACTATaGCCTCGGAGAGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHKTDPL*PRRALR
Trigger: CCTGAGTGCTCTCCGAGGCAATAGTGGATCCGTTTT...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGAAAACGGATCCACTATaGCCTCGGAGAGCACTCAGG +
Preference number: 5 (lower is better)
Translates to: SSVILRNYLFLEACCKRKKTDPL*PRRALR
Trigger: CCTGAGTGCTCTCCGAGGCAATAGTGGATCCGTTTT...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACACTGGCTTAGTCTTATaGCTCAGGAGACCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHTGLVL*LRRPEA
Trigger: GGCCTCAGGTCTCCTGAGCAATAAGACTAAGCCAGT...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAATGGTTCTGGCTAAGATaGAGTGGTTGTGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: REHSICCWHTKEATLKYKWFWLR*SGCAAL
Trigger: CAGTGCAGCACAACCACTCAATCTTAGCCAGAACCA...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGACCCCTGCAGAACAAGTaGCTGGCTAAGAAATTTCAA +
Preference number: 5 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRPLQNK*LAKKFQ
Trigger: TTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGGG...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACAAAATAGGGCAAACTTaGGGAAGACTACAACAATGC +
Preference number: 5 (lower is better)
Translates to: SRHRWIFMLENRKCQFADKIGQT*GRLQQC
Trigger: GCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTT...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCATATTTAATATTGGCTaGACTCCTCTCACCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SEQSLFLGNCRRWASELFIFNIG*TPLTCF
Trigger: GAAGCAGGTGAGAGGAGTCAAGCCAATATTAAATAT...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGCTTTCTGTGAGTTCCTaGTCACCAGCGGCACCACAA +
Preference number: 5 (lower is better)
Translates to: SSVILRNYLFLEACCKRKLSVSS*SPAAPQ
Trigger: TTGTGGTGCCGCTGGTGACAAGGAACTCACAGAAAG...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACATGACTCAACAGGCTTaGGTTCCTTCTCTATATTCT +
Preference number: 5 (lower is better)
Translates to: SRHRWIFMLENRKCQFADMTQQA*VPSLYS
Trigger: AGAATATAGAGAAGGAACCAAAGCCTGTTGAGTCAT...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCAACTGCTTGGCTATCTaGACCAATATAGTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: SEQSLFLGNCRRWASELFNCLAI*TNIVLK
Trigger: TTTCAGCACTATATTGGTCAAGATAGCCAAGCAGTT...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAAATCAGAATGTGCTaGGCAAAAAGGAGACACAAA +
Preference number: 5 (lower is better)
Translates to: QNNLSSLVTAEDGHLNSSKIRMC*AKRRHK
Trigger: TTTGTGTCTCCTTTTTGCCAAGCACATTCTGATTTT...GGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAAATCAGAATGTGCTaGGCAAAAAGGAGACACAAA +
Preference number: 5 (lower is better)
Translates to: SLFLGNCRRWASELFQVPKIRMC*AKRRHK
Trigger: TTTGTGTCTCCTTTTTGCCAAGCACATTCTGATTTT...TGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAAGTGGTATCTGCTTATaGGACTGGGGTGCAGGAATG +
Preference number: 5 (lower is better)
Translates to: REHSICCWHTKEATLKYKSGICL*DWGAGM
Trigger: CATTCCTGCACCCCAGTCCAATAAGCAGATACCACT...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCATCGGAAATGCCAGTTaGCAGACTAAGACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: SEQSLFLGNCRRWASELFIGNAS*QTKTEK
Trigger: TTTTTCAGTCTTAGTCTGCAAACTGGCATTTCCGAT...GAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCAGACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACAATGGCCAGAACTGTTaGAAATGGAGTTCTTATTCC +
Preference number: 5 (lower is better)
Translates to: SRHRWIFMLENRKCQFADNGQNC*KWSSYS
Trigger: GGAATAAGAACTCCATTTCAAACAGTTCTGGCCATT...GTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGTCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp CAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATGGGCAGGCAGTGGGCTAAATTaGTTTTGCTTTAGAAAATCA +
Preference number: 5 (lower is better)
Translates to: QRVTSEQSLFLGNCRRWAGSGLN*FCFRKS
Trigger: TGATTTTCTAAAGCAAAACAAATTTAGCCCACTGCC...TGCCCATCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS CCA 90 bp ATGCCATACCCTTCTAGTCTCTGCTTAAAGCTCACTTCTTCAGTGTaGCAGAGGCTGTTGCTTTGTATCAAAATCAATAGTTCACTTAGA +
Preference number: 5 (lower is better)
Translates to: MPYPSSLCLKLTSSV*QRLLLCIKINSSLR
Trigger: TCTAAGTGAACTATTGATTTTGATACAAAGCAACAGCCTCTGCCACACTGAAGAAGTGAGCTTTAAGCAGAGACTAGAAGGGTATGGCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503968.1
ENST00000514621.5
CDS-3UTR CAA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACACTTCCGAGCTTCTTTaGATTTTATTCCAGTCTCCA +
Preference number: 5 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYTSELL*ILFQSP
Trigger: TGGAGACTGGAATAAAATCAAAAGAAGCTCGGAAGT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAGGAATCCAGAATGCTTaGTTGTTGCTTGTAGTCCAG +
Preference number: 5 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRGIQNA*LLLVVQ
Trigger: CTGGACTACAAGCAACAACAAAGCATTCTGGATTCC...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAGGAACTGGATTGTTGTaGTCTGACAACATGGGCAAC +
Preference number: 5 (lower is better)
Translates to: REHSICCWHTKEATLKYKGTGLL*SDNMGN
Trigger: GTTGCCCATGTTGTCAGACAACAACAATCCAGTTCC...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGCCAGAGCTACTGGGCTaGTATTTGTTGTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: SSVILRNYLFLEACCKRKPELLG*YLLSSS
Trigger: GGAAGAGGACAACAAATACAAGCCCAGTAGCTCTGG...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACCCAGAGCTACTGGGCTaGTATTTGTTGTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHPELLG*YLLSSS
Trigger: GGAAGAGGACAACAAATACAAGCCCAGTAGCTCTGG...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACTGGTTCTGGCTAAGATaGAGTGGTTGTGCTGCACTG +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHWFWLR*SGCAAL
Trigger: CAGTGCAGCACAACCACTCAATCTTAGCCAGAACCA...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACGGTATCCAGTGTAAATaGTTGAGCCTCGGGAAGACC +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHGIQCK*LSLGKT
Trigger: GGTCTTCCCGAGGCTCAACAATTTACACTGGATACC...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGGGTATCCAGTGTAAATaGTTGAGCCTCGGGAAGACC +
Preference number: 5 (lower is better)
Translates to: SSVILRNYLFLEACCKRKGIQCK*LSLGKT
Trigger: GGTCTTCCCGAGGCTCAACAATTTACACTGGATACC...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGACCCCTGCAGAACAAGTaGCTGGCTAAGAAATTTCAA +
Preference number: 5 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRPLQNK*LAKKFQ
Trigger: TTGAAATTTCTTAGCCAGCAACTTGTTCTGCAGGGG...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACATATTTAATATTGGCTaGACTCCTCTCACCTGCTTC +
Preference number: 5 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYIFNIG*TPLTCF
Trigger: GAAGCAGGTGAGAGGAGTCAAGCCAATATTAAATAT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACCCATCCTGCACCTCCTaGACACCATCTCTATCTACA +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHPSCTS*TPSLST
Trigger: TGTAGATAGAGATGGTGTCAAGGAGGTGCAGGATGG...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGCCATCCTGCACCTCCTaGACACCATCTCTATCTACA +
Preference number: 5 (lower is better)
Translates to: SSVILRNYLFLEACCKRKPSCTS*TPSLST
Trigger: TGTAGATAGAGATGGTGTCAAGGAGGTGCAGGATGG...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGAGTGGTATCTGCTTATaGGACTGGGGTGCAGGAATG +
Preference number: 5 (lower is better)
Translates to: SSVILRNYLFLEACCKRKSGICL*DWGAGM
Trigger: CATTCCTGCACCCCAGTCCAATAAGCAGATACCACT...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACATCGGAAATGCCAGTTaGCAGACTAAGACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYIGNAS*QTKTEK
Trigger: TTTTTCAGTCTTAGTCTGCAAACTGGCATTTCCGAT...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGATTCTTATTCCTGGGGTaGGTATTTCAGCTGAGCACT +
Preference number: 5 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRFLFLG*VFQLST
Trigger: AGTGCTCAGCTGAAATACCAACCCCAGGAATAAGAA...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACTGGAACTGCTACTCTTaGTGGTCACAGTGGTGGTTG +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHWNCYS*WSQWWL
Trigger: CAACCACCACTGTGACCACAAAGAGTAGCAGTTCCA...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp TCCTTGGTAACTGCAGAAGATGGGCATCTGAACTCTTCCAAGTACCAAAATTACTACTATAAATGTCTGTaGGAATGGATCTGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: SLVTAEDGHLNSSKYQNYYYKCL*EWICLS
Trigger: ACTCAGACAGATCCATTCCAACAGACATTTATAGTA...GTAATTTTGGTACTTGGAAGAGTTCAGATGCCCATCTTCTGCAGTTACCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACGGAACTGGATTGTTGTaGTCTGACAACATGGGCAAC +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHGTGLL*SDNMGN
Trigger: GTTGCCCATGTTGTCAGACAACAACAATCCAGTTCC...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACCTGGGCTTGTATTTGTaGTCCTCTTCCTCATCAGTG +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHLGLYL*SSSSSV
Trigger: CACTGATGAGGAAGAGGACAACAAATACAAGCCCAG...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACATCCAGTGTAAATTGTaGAGCCTCGGGAAGACCCAA +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHIQCKL*SLGKTQ
Trigger: TTGGGTCTTCCCGAGGCTCAACAATTTACACTGGAT...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAAAAATAGGGCAAACTTaGGGAAGACTACAACAATGC +
Preference number: 5 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRKIGQT*GRLQQC
Trigger: GCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAATCCAGAATGCTTTGTaGTTGCTTGTAGTCCAGTTT +
Preference number: 5 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRIQNAL*LLVVQF
Trigger: AAACTGGACTACAAGCAACAACAAAGCATTCTGGAT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACGGAATCCAGAATGCTTaGTTGTTGCTTGTAGTCCAG +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHGIQNA*LLLVVQ
Trigger: CTGGACTACAAGCAACAACAAAGCATTCTGGATTCC...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATTTTTCAGAGGGTAACTTCAGAACAATCTCTCTTCCTTGGTAACTGCAGAAGAAAAATAGGGCAAACTTaGGGAAGACTACAACAATGC +
Preference number: 5 (lower is better)
Translates to: IFQRVTSEQSLFLGNCRRKIGQT*GRLQQC
Trigger: GCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTT...TCTTCTGCAGTTACCAAGGAAGAGAGATTGTTCTGAAGTTACCCTCTGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAAAGAGAGCATTCAATTaGCTGCTGGCATACAAAGGA +
Preference number: 5 (lower is better)
Translates to: REHSICCWHTKEATLKYKKRAFN*LLAYKG
Trigger: TCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCTT...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAAAAATCAGAATGTGCTaGGCAAAAAGGAGACACAAA +
Preference number: 5 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRKIRMC*AKRRHK
Trigger: TTTGTGTCTCCTTTTTGCCAAGCACATTCTGATTTT...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACTTCTTATTCCTGGGGTaGGTATTTCAGCTGAGCACT +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHFLFLG*VFQLST
Trigger: AGTGCTCAGCTGAAATACCAACCCCAGGAATAAGAA...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ACACAGGTGGATTTTTATGCTGGAAAATCGGAAATGCCAGTTTGCAGACTAAGAGGCAGTGGGCTAAATTaGTTTTGCTTTAGAAAATCA +
Preference number: 5 (lower is better)
Translates to: TQVDFYAGKSEMPVCRLRGSGLN*FCFRKS
Trigger: TGATTTTCTAAAGCAAAACAAATTTAGCCCACTGCC...TCTTAGTCTGCAAACTGGCATTTCCGATTTTCCAGCATAAAAATCCACCTGTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGATTGGTCTGATGTACTaGAGTGGCAGTGGGCTAAAT +
Preference number: 5 (lower is better)
Translates to: SSVILRNYLFLEACCKRKIGLMY*SGSGLN
Trigger: ATTTAGCCCACTGCCACTCAAGTACATCAGACCAAT...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACTGGTTAGATTTGTGCTaGTATTTGGGGCAACATGTG +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHWLDLC*YLGQHV
Trigger: CACATGTTGCCCCAAATACAAGCACAAATCTAACCA...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACAGCTCATGGTTAGATTaGTGCTTGTATTTGGGGCAA +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHSSWLD*CLYLGQ
Trigger: TTGCCCCAAATACAAGCACAAATCTAACCATGAGCT...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAAATGGCCAGAACTGTTaGAAATGGAGTTCTTATTCC +
Preference number: 5 (lower is better)
Translates to: REHSICCWHTKEATLKYKNGQNC*KWSSYS
Trigger: GGAATAAGAACTCCATTTCAAACAGTTCTGGCCATT...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACAAAATAGGGCAAACTTaGGGAAGACTACAACAATGC +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHKIGQT*GRLQQC
Trigger: GCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTT...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGATGACTCAACAGGCTTaGGTTCCTTCTCTATATTCT +
Preference number: 5 (lower is better)
Translates to: SSVILRNYLFLEACCKRKMTQQA*VPSLYS
Trigger: AGAATATAGAGAAGGAACCAAAGCCTGTTGAGTCAT...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACAACTGCTTGGCTATCTaGACCAATATAGTGCTGAAA +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHNCLAI*TNIVLK
Trigger: TTTCAGCACTATATTGGTCAAGATAGCCAAGCAGTT...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGAGAGCATTCAATTTGCTGCTGGCATACAAAGGAAGCTACTTTGAAGTATAAAAAAATCAGAATGTGCTaGGCAAAAAGGAGACACAAA +
Preference number: 5 (lower is better)
Translates to: REHSICCWHTKEATLKYKKIRMC*AKRRHK
Trigger: TTTGTGTCTCCTTTTTGCCAAGCACATTCTGATTTT...TTTATACTTCAAAGTAGCTTCCTTTGTATGCCAGCAGCAAATTGAATGCTCTCT
37% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACATCGGAAATGCCAGTTaGCAGACTAAGACTGAAAAA +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHIGNAS*QTKTEK
Trigger: TTTTTCAGTCTTAGTCTGCAAACTGGCATTTCCGAT...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACTACTATAAATGTCTGTaGGAATGGATCTGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHYYKCL*EWICLS
Trigger: ACTCAGACAGATCCATTCCAACAGACATTTATAGTA...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp AGCTCAGTAATTCTCAGAAACTATCTGTTTCTAGAGGCTTGTTGTAAAAGAAAGTACTATAAATGTCTGTaGGAATGGATCTGTCTGAGT +
Preference number: 5 (lower is better)
Translates to: SSVILRNYLFLEACCKRKYYKCL*EWICLS
Trigger: ACTCAGACAGATCCATTCCAACAGACATTTATAGTA...CTTTCTTTTACAACAAGCCTCTAGAAACAGATAGTTTCTGAGAATTACTGAGCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000340480.8
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS-3UTR CAA 90 bp ATGAATTTAAAAATAGGGCAAACTTTGGGAAGACTACAACAATGCAGTCAACACGGCAGTGGGCTAAATTaGTTTTGCTTTAGAAAATCA +
Preference number: 5 (lower is better)
Translates to: MNLKIGQTLGRLQQCSQHGSGLN*FCFRKS
Trigger: TGATTTTCTAAAGCAAAACAAATTTAGCCCACTGCC...GTGTTGACTGCATTGTTGTAGTCTTCCCAAAGTTTGCCCTATTTTTAAATTCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000426820.7
ENST00000626993.2
CDS GCA 72 bp CGCCGGTGTGTCTGGTTCTCAGCCGCGAGCTGGGGCTaGCGTGAGGAGGCGGCGGAGGAGACGAGATCTGGG +
Preference number: 6 (lower is better)
Translates to: RRCVWFSAASWG*REEAAEETRSG
Trigger: CCCAGATCTCGTCTCCTCCGCCGCCTCCTCACGGCAGCCCCAGCTCGCGGCTGAGAACCAGACACACCGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
CDS CCA 72 bp CTCCGTAGGGAGCCAGCGTGGATCGAGTGCGGGGCCTaGACTTCCCGCCCCCTCCGCACTGCAGACTCTGCG +
Preference number: 6 (lower is better)
Translates to: LRREPAWIECGA*TSRPLRTADSA
Trigger: CGCAGAGTCTGCAGTGCGGAGGGGGCGGGAAGTCCAGGCCCCGCACTCGATCCACGCTGGCTCCCTACGGAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000426820.7
CDS GCA 72 bp AGCGGCAGTCTGTTCAACCAGCGCCGGCCGGCCGGCTaGGCAGCTCAGAGTAAAGGGCACCGCATACTGCGG +
Preference number: 6 (lower is better)
Translates to: SGSLFNQRRPAG*AAQSKGHRILR
Trigger: CCGCAGTATGCGGTGCCCTTTACTCTGAGCTGCGCAGCCGGCCGGCCGGCGCTGGTTGAACAGACTGCCGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
CDS GCA 72 bp GGCCTGGACTTCCCGCCCCCTCCGCACTGCAGACTCTaGGGTGATTTAAAGGTGCCTGGCGGTGGTACGGGA +
Preference number: 6 (lower is better)
Translates to: GLDFPPPPHCRL*GDLKVPGGGTG
Trigger: TCCCGTACCACCGCCAGGCACCTTTAAATCACCGCAGAGTCTGCAGTGCGGAGGGGGCGGGAAGTCCAGGCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426820.7
CDS CCA 72 bp ACTGATTGCAGTAGGAGTCGGTGGGCCTCGAGTAGGTaGGCCTCCGTAGGGAGCCAGCGTGGATCGAGTGCG +
Preference number: 6 (lower is better)
Translates to: TDCSRSRWASSR*ASVGSQRGSSA
Trigger: CGCACTCGATCCACGCTGGCTCCCTACGGAGGCCCACCTACTCGAGGCCCACCGACTCCTACTGCAATCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369559.8
ENST00000426820.7
ENST00000626993.2
CDS TCA 72 bp GGACTTCCCGCCCCCTCCGCACTGCAGACTCTGCGGTaGTTTAAAGGTGCCTGGCGGTGGTACGGGATCCAA +
Preference number: 6 (lower is better)
Translates to: GLPAPSALQTLR*FKGAWRWYGIQ
Trigger: TTGGATCCCGTACCACCGCCAGGCACCTTTAAATCACCGCAGAGTCTGCAGTGCGGAGGGGGCGGGAAGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000426820.7
CDS CCA 72 bp GGACGATCGCATAGTACTGATTGCAGTAGGAGTCGGTaGGCCTCGAGTAGGTGGGCCTCCGTAGGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: GRSHSTDCSRSR*ASSRWASVGSQ
Trigger: CTGGCTCCCTACGGAGGCCCACCTACTCGAGGCCCACCGACTCCTACTGCAATCAGTACTATGCGATCGTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369559.8
ENST00000426820.7
ENST00000626993.2
CDS GCA 72 bp TGGAGGCACAATGATAGTGCGGGTGCCAGTGCCATCTaGCACAACTCTGCCAGGCCCCTCCAAAACGGATCC +
Preference number: 6 (lower is better)
Translates to: WRHNDSAGASAI*HNSARPLQNGS
Trigger: GGATCCGTTTTGGAGGGGCCTGGCAGAGTTGTGGCAGATGGCACTGGCACCCGCACTATCATTGTGCCTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS TCA 72 bp GGCAACTGTTGCCAAGTTGAAGGCAGGAGAATTTGCTaGGTCCCTCCAGGCCACGCCAGTACAGCGGCAGTC +
Preference number: 6 (lower is better)
Translates to: GNCCQVEGRRIC*VPPGHASTAAV
Trigger: GACTGCCGCTGTACTGGCGTGGCCTGGAGGGACTCAGCAAATTCTCCTGCCTTCAACTTGGCAACAGTTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000361587.3
CDS CAA 90 bp GCTGGACAGAGTTGTGTAGAGCTACCCCAGGCAACTGTTGCCAAGTaGAAGGCAGGAGAATTTGCTGAGTCCCTCCAGGCCACGCCTGCA +
Preference number: 6 (lower is better)
Translates to: AGQSCVELPQATVAK*KAGEFAESLQATPA
Trigger: TGCAGGCGTGGCCTGGAGGGACTCAGCAAATTCTCCTGCCTTCAACTTGGCAACAGTTGCCTGGGGTAGCTCTACACAACTCTGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
CDS CAA 90 bp CCACTCCCCATGGCCTCTGGAATCATTGCTGTGGGCTGGACAGAGTaGTGTAGAGCTACCCCAGGCAACTGTTGCCAAGTTGAAGGCAGG +
Preference number: 6 (lower is better)
Translates to: PLPMASGIIAVGWTE*CRATPGNCCQVEGR
Trigger: CCTGCCTTCAACTTGGCAACAGTTGCCTGGGGTAGCTCTACACAACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCCATGGGGAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CAA 90 bp GCTGGACAGAGTTGTGTAGAGCTACCCCAGGCAACTGTTGCCAAGTaGAAGGCAGGAGAATTTGCTGAGTCCCTCCAGGCCACGCCTGCT +
Preference number: 6 (lower is better)
Translates to: AGQSCVELPQATVAK*KAGEFAESLQATPA
Trigger: AGCAGGCGTGGCCTGGAGGGACTCAGCAAATTCTCCTGCCTTCAACTTGGCAACAGTTGCCTGGGGTAGCTCTACACAACTCTGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000369555.6
ENST00000626993.2
CDS GCA 72 bp AAGGCACTCGACGACACTGATGGGGGCGAAAACACTTaGAGCTGTGATGCCATACTGAGGCGGAAGTGCAGC +
Preference number: 6 (lower is better)
Translates to: KALDDTDGGENT*SCDAILRRKCS
Trigger: GCTGCACTTCCGCCTCAGTATGGCATCACAGCTGCAAGTGTTTTCGCCCCCATCAGTGTCGTCGAGTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369559.8
ENST00000426820.7
ENST00000626993.2
CDS GCA 72 bp AAGGCACTCGACGACACTGATGGGGGCGAAAACACTTaGAGCTGTGATGCCATACCGCCGGTGTGTCTGGTT +
Preference number: 6 (lower is better)
Translates to: KALDDTDGGENT*SCDAIPPVCLV
Trigger: AACCAGACACACCGGCGGTATGGCATCACAGCTGCAAGTGTTTTCGCCCCCATCAGTGTCGTCGAGTGCCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
CDS CCA 72 bp AGCGGCTGTTACAACAATATGCTCCACTGCAGGAGCTaGGAGGAGGAGGCCCTGGTCGTAAGCAGGGATGTT +
Preference number: 6 (lower is better)
Translates to: SGCYNNMLHCRS*EEEALVVSRDV
Trigger: AACATCCCTGCTTACGACCAGGGCCTCCTCCTCCCAGCTCCTGCAGTGGAGCATATTGTTGTAACAGCCGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000503968.1
ENST00000514621.5
ENST00000626993.2
CDS CCA 72 bp CTTCTCCGCTGGAACTGCTACTCTTTGTGGTCACAGTaGTGGTTGTGGCAGCAGCACCCACCACAGTCCTGT +
Preference number: 6 (lower is better)
Translates to: LLRWNCYSLWSQ*WLWQQHPPQSC
Trigger: ACAGGACTGTGGTGGGTGCTGCTGCCACAACCACCACTGTGACCACAAAGAGTAGCAGTTCCAGCGGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CCA 72 bp GGTAATCCCCTTCTCCGCTGGAACTGCTACTCTTTGTaGTCACAGTGGTGGTTGTGGCAGCAGCACCCACCA +
Preference number: 6 (lower is better)
Translates to: GNPLLRWNCYSL*SQWWLWQQHPP
Trigger: TGGTGGGTGCTGCTGCCACAACCACCACTGTGACCACAAAGAGTAGCAGTTCCAGCGGAGAAGGGGATTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CAA 90 bp GCTGGACAGAGTTGTGTAGAGCTACCCCAGGCAACTGTTGCCAAGTaGAAGGCAGGAGAATTTGCTGAGTCCCTCCAGGCCACGCCAGTA +
Preference number: 6 (lower is better)
Translates to: AGQSCVELPQATVAK*KAGEFAESLQATPV
Trigger: TACTGGCGTGGCCTGGAGGGACTCAGCAAATTCTCCTGCCTTCAACTTGGCAACAGTTGCCTGGGGTAGCTCTACACAACTCTGTCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000361587.3
CDS TCA 72 bp AAGGGCACCGCATACTGCGGTGTGATGGTGGCTACTTaGGGGTGGAGAGTTGCTACCATTAGTGGTGTACAG +
Preference number: 6 (lower is better)
Translates to: KGTAYCGVMVAT*GWRVATISGVQ
Trigger: CTGTACACCACTAATGGTAGCAACTCTCCACCCTCAAGTAGCCACCATCACACCGCAGTATGCGGTGCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
CDS GCA 72 bp CAACTCTGCCAGGCCCCTCCAAAACGGATCCACTATTaGCTCGGAGAGCACTCAGGGTATCAGTGGAATAAG +
Preference number: 6 (lower is better)
Translates to: QLCQAPPKRIHY*LGEHSGYQWNK
Trigger: CTTATTCCACTGATACCCTGAGTGCTCTCCGAGGCAATAGTGGATCCGTTTTGGAGGGGCCTGGCAGAGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS GCA 72 bp GAGGAGGCCCTGGTCGTAAGCAGGGATGTTGAAATTTaGTACCTGGTGAGAGGAGTTGGCTTGCCCTTGTGT +
Preference number: 6 (lower is better)
Translates to: EEALVVSRDVEI*YLVRGVGLPLC
Trigger: ACACAAGGGCAAGCCAACTCCTCTCACCAGGTAGCAAATTTCAACATCCCTGCTTACGACCAGGGCCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000503968.1
ENST00000514621.5
ENST00000626993.2
CDS CCA 72 bp TCTCATGCTGGACCAGCTGGTAATCCCCTTCTCCGCTaGAACTGCTACTCTTTGTGGTCACAGTGGTGGTTG +
Preference number: 6 (lower is better)
Translates to: SHAGPAGNPLLR*NCYSLWSQWWL
Trigger: CAACCACCACTGTGACCACAAAGAGTAGCAGTTCCAGCGGAGAAGGGGATTACCAGCTGGTCCAGCATGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS TCA 72 bp AGTGCTAGGGTGAGTGGTATAGGCTGCAGCATGCCTTaGGGAACCCTGTGGGGAGAAAAGATGAGCAATGGA +
Preference number: 6 (lower is better)
Translates to: SARVSGIGCSMP*GTLWGEKMSNG
Trigger: TCCATTGCTCATCTTTTCTCCCCACAGGGTTCCTCAAGGCATGCTGCAGCCTATACCACTCACCCTAGCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS GCA 72 bp CGATACCCTGTGGGGGTGATACAGCATCCAGATGACTaGCCACTCACTGAAGCGACTGGCTTAGTCTTATTG +
Preference number: 6 (lower is better)
Translates to: RYPVGVIQHPDD*PLTEATGLVLL
Trigger: CAATAAGACTAAGCCAGTCGCTTCAGTGAGTGGGCAGTCATCTGGATGCTGTATCACCCCCACAGGGTATCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS GCA 72 bp AGACTCTTGAGCTTCATCAAGGCTGTGGCCACCTGCTaGAAGATTGGTCTGATGTACTTGAGTGGCAGTGGG +
Preference number: 6 (lower is better)
Translates to: RLLSFIKAVATC*KIGLMYLSGSG
Trigger: CCCACTGCCACTCAAGTACATCAGACCAATCTTGCAGCAGGTGGCCACAGCCTTGATGAAGCTCAAGAGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CCA 72 bp TCTGTTGGAATGGATCTGTCTGAGTGCAAATCTGGGTaGTTCCAGGCTGCAAGGAAACACCCTGCTGGGCAA +
Preference number: 6 (lower is better)
Translates to: SVGMDLSECKSG*FQAARKHPAGQ
Trigger: TTGCCCAGCAGGGTGTTTCCTTGCAGCCTGGAACCACCCAGATTTGCACTCAGACAGATCCATTCCAACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CAA 72 bp ATGGCCTCTGGAATCATTGCTGTGGGCTGGACAGAGTaGTGTAGAGCTACCCCAGGCAACTGTTGCCAAGTT +
Preference number: 6 (lower is better)
Translates to: MASGIIAVGWTE*CRATPGNCCQV
Trigger: AACTTGGCAACAGTTGCCTGGGGTAGCTCTACACAACTCTGTCCAGCCCACAGCAATGATTCCAGAGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CAA 72 bp GATGTTGAAATTTGCTACCTGGTGAGAGGAGTTGGCTaGCCCTTGTGTGGCTGGGAGGGTTTTGCTGTGGGT +
Preference number: 6 (lower is better)
Translates to: DVEICYLVRGVG*PLCGWEGFAVG
Trigger: ACCCACAGCAAAACCCTCCCAGCCACACAAGGGCAAGCCAACTCCTCTCACCAGGTAGCAAATTTCAACATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000503968.1
ENST00000514621.5
ENST00000626993.2
CDS TCA 72 bp TGCAGCTGTGATGCCATACTGAGGCGGAAGTGCAGCTaGATGGACTCTCTAGGACGATCGCATAGTACTGAT +
Preference number: 6 (lower is better)
Translates to: CSCDAILRRKCS*MDSLGRSHSTD
Trigger: ATCAGTACTATGCGATCGTCCTAGAGAGTCCATTCAGCTGCACTTCCGCCTCAGTATGGCATCACAGCTGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000369559.8
ENST00000426820.7
ENST00000626993.2
CDS GCA 72 bp CCAAGACTCTTGAGCTTCATCAAGGCTGTGGCCACCTaGTGCAAGATTGGTCTGATGTACTTGAGTGGCAGT +
Preference number: 6 (lower is better)
Translates to: PRLLSFIKAVAT*CKIGLMYLSGS
Trigger: ACTGCCACTCAAGTACATCAGACCAATCTTGCAGCAGGTGGCCACAGCCTTGATGAAGCTCAAGAGTCTTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CCA 72 bp AGCAGTGGCCAATGTCACATGGTTAGTCAGCAAGGATaGCTGCTGCATGATAGTGCTGTACTGGTTGCCATG +
Preference number: 6 (lower is better)
Translates to: SSGQCHMVSQQG*LLHDSAVLVAM
Trigger: CATGGCAACCAGTACAGCACTATCATGCAGCAGCCATCCTTGCTGACTAACCATGTGACATTGGCCACTGCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS GCA 72 bp CCAAGGAATTATAAGAAGATGTGGTGCGGAGGGGACTaGTCCCAACCAGAGAATAGACTTGGGAAGGCAGAA +
Preference number: 6 (lower is better)
Translates to: PRNYKKMWCGGD*SQPENRLGKAE
Trigger: TTCTGCCTTCCCAAGTCTATTCTCTGGTTGGGAGCAGTCCCCTCCGCACCACATCTTCTTATAATTCCTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS GCA 72 bp CTTGGACAGGGACCAAGGAATTATAAGAAGATGTGGTaGGGAGGGGACTGCTCCCAACCAGAGAATAGACTT +
Preference number: 6 (lower is better)
Translates to: LGQGPRNYKKMW*GGDCSQPENRL
Trigger: AAGTCTATTCTCTGGTTGGGAGCAGTCCCCTCCGCACCACATCTTCTTATAATTCCTTGGTCCCTGTCCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS GCA 72 bp ACACTTGCAGCTGTGATGCCATACCCTTCTAGTCTCTaGTTAAAGCTCACTTCTTCAGTGTGGCAGAGGCTG +
Preference number: 6 (lower is better)
Translates to: TLAAVMPYPSSL*LKLTSSVWQRL
Trigger: CAGCCTCTGCCACACTGAAGAAGTGAGCTTTAAGCAGAGACTAGAAGGGTATGGCATCACAGCTGCAAGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000503968.1
ENST00000514621.5
CDS CCA 72 bp GATCTTGGACAGGGACCAAGGAATTATAAGAAGATGTaGTGCGGAGGGGACTGCTCCCAACCAGAGAATAGA +
Preference number: 6 (lower is better)
Translates to: DLGQGPRNYKKM*CGGDCSQPENR
Trigger: TCTATTCTCTGGTTGGGAGCAGTCCCCTCCGCACCACATCTTCTTATAATTCCTTGGTCCCTGTCCAAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CCA 72 bp ATCCACTATTGCCTCGGAGAGCACTCAGGGTATCAGTaGAATAAGGGCTGCTCAAAGAAGAGTCAGAGTCTG +
Preference number: 6 (lower is better)
Translates to: IHYCLGEHSGYQ*NKGCSKKSQSL
Trigger: CAGACTCTGACTCTTCTTTGAGCAGCCCTTATTCCACTGATACCCTGAGTGCTCTCCGAGGCAATAGTGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CCA 72 bp TACCTGGTGAGAGGAGTTGGCTTGCCCTTGTGTGGCTaGGAGGGTTTTGCTGTGGGTATAATATTTGTCGTT +
Preference number: 6 (lower is better)
Translates to: YLVRGVGLPLCG*EGFAVGIIFVV
Trigger: AACGACAAATATTATACCCACAGCAAAACCCTCCCAGCCACACAAGGGCAAGCCAACTCCTCTCACCAGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000503968.1
ENST00000514621.5
ENST00000626993.2
CDS CCA 72 bp TTGCTACCTGGTGAGAGGAGTTGGCTTGCCCTTGTGTaGCTGGGAGGGTTTTGCTGTGGGTATAATATTTGT +
Preference number: 6 (lower is better)
Translates to: LLPGERSWLALV*LGGFCCGYNIC
Trigger: ACAAATATTATACCCACAGCAAAACCCTCCCAGCCACACAAGGGCAAGCCAACTCCTCTCACCAGGTAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000503968.1
ENST00000514621.5
ENST00000626993.2
CDS CCA 72 bp GAGCTTCATCAAGGCTGTGGCCACCTGCTGCAAGATTaGTCTGATGTACTTGAGTGGCAGTGGGCTAAATTT +
Preference number: 6 (lower is better)
Translates to: ELHQGCGHLLQD*SDVLEWQWAKF
Trigger: AAATTTAGCCCACTGCCACTCAAGTACATCAGACCAATCTTGCAGCAGGTGGCCACAGCCTTGATGAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS TCA 72 bp TCTTCTTCGAAGGGAGGGAACTGGATTGTTGTTGTCTaGCAACATGGGCAACACCAACATTCAGAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: SSSKGGNWIVVV*QHGQHQHSEAE
Trigger: CTCAGCCTCTGAATGTTGGTGTTGCCCATGTTGTCAGACAACAACAATCCAGTTCCCTCCCTTCGAAGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CAA 90 bp AGGGATGTTGAAATTTGCTACCTGGTGAGAGGAGTTGGCTTGCCCTaGTGTGGCTGGGAGGGTTTTGCTGTGGGTATAATATTTGTCGTT +
Preference number: 6 (lower is better)
Translates to: RDVEICYLVRGVGLP*CGWEGFAVGIIFVV
Trigger: AACGACAAATATTATACCCACAGCAAAACCCTCCCAGCCACACAAGGGCAAGCCAACTCCTCTCACCAGGTAGCAAATTTCAACATCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000503968.1
ENST00000514621.5
ENST00000626993.2
CDS CAA 90 bp GTAAGCAGGGATGTTGAAATTTGCTACCTGGTGAGAGGAGTTGGCTaGCCCTTGTGTGGCTGGGAGGGTTTTGCTGTGGGTATAATATTT +
Preference number: 6 (lower is better)
Translates to: VSRDVEICYLVRGVG*PLCGWEGFAVGIIF
Trigger: AAATATTATACCCACAGCAAAACCCTCCCAGCCACACAAGGGCAAGCCAACTCCTCTCACCAGGTAGCAAATTTCAACATCCCTGCTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000503968.1
ENST00000514621.5
ENST00000626993.2
CDS GCA 72 bp ATCCACATTTTTGATATGGCTCAAGCAAAGAAACGTTaGTTCTGTGAGTCAGGGTCTGGCTGCTTTGGAAGG +
Preference number: 6 (lower is better)
Translates to: IHIFDMAQAKKR*FCESGSGCFGR
Trigger: CCTTCCAAAGCAGCCAGACCCTGACTCACAGAAGCAACGTTTCTTTGCTTGAGCCATATCAAAAATGTGGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CCA 72 bp AAACGCAGGTGGACATACTATAAATGTCTGTTGGAATaGATCTGTCTGAGTGCAAATCTGGGTGGTTCCAGG +
Preference number: 6 (lower is better)
Translates to: KRRWTYYKCLLE*ICLSANLGGSR
Trigger: CCTGGAACCACCCAGATTTGCACTCAGACAGATCCATTCCAACAGACATTTATAGTATGTCCACCTGCGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CAA 72 bp CATTATCCATCCTCACAGGGAATCCAGAATGCTTTGTaGTTGCTTGTAGTCCAGTTTGAAACGCAGGTGGAC +
Preference number: 6 (lower is better)
Translates to: HYPSSQGIQNAL*LLVVQFETQVD
Trigger: GTCCACCTGCGTTTCAAACTGGACTACAAGCAACAACAAAGCATTCTGGATTCCCTGTGAGGATGGATAATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CAA 72 bp CTTATTCTTCTTCGAAGGGAGGGAACTGGATTGTTGTaGTCTGACAACATGGGCAACACCAACATTCAGAGG +
Preference number: 6 (lower is better)
Translates to: LILLRREGTGLL*SDNMGNTNIQR
Trigger: CCTCTGAATGTTGGTGTTGCCCATGTTGTCAGACAACAACAATCCAGTTCCCTCCCTTCGAAGAAGAATAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CAA 72 bp CTGCTTATTCTTCTTCGAAGGGAGGGAACTGGATTGTaGTTGTCTGACAACATGGGCAACACCAACATTCAG +
Preference number: 6 (lower is better)
Translates to: LLILLRREGTGL*LSDNMGNTNIQ
Trigger: CTGAATGTTGGTGTTGCCCATGTTGTCAGACAACAACAATCCAGTTCCCTCCCTTCGAAGAAGAATAAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CAA 90 bp CAATCGGTACAGCATTATCCATCCTCACAGGGAATCCAGAATGCTTaGTTGTTGCTTGTAGTCCAGTTTGAAACGCAGGTGGACATACTA +
Preference number: 6 (lower is better)
Translates to: QSVQHYPSSQGIQNA*LLLVVQFETQVDIL
Trigger: TAGTATGTCCACCTGCGTTTCAAACTGGACTACAAGCAACAACAAAGCATTCTGGATTCCCTGTGAGGATGGATAATGCTGTACCGATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000340480.8
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS TCA 72 bp GCTGTGGGTATAATATTTGTCGTTGCTACTCTGTCCTaGAACATCCCAGCCAGAGGGCTCTATTTTCAGTTT +
Preference number: 6 (lower is better)
Translates to: AVGIIFVVATLS*NIPARGLYFQF
Trigger: AAACTGAAAATAGAGCCCTCTGGCTGGGATGTTTCAGGACAGAGTAGCAACGACAAATATTATACCCACAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000503968.1
ENST00000514621.5
ENST00000626993.2
CDS CAA 72 bp AGAGGGGGATGTTCTTCTATGATCTGCACACTACCGTaGCTGTCAACTTCCTCACTTTTTCGTTTCAATCCA +
Preference number: 6 (lower is better)
Translates to: RGGCSSMICTLP*LSTSSLFRFNP
Trigger: TGGATTGAAACGAAAAAGTGAGGAAGTTGACAGCAACGGTAGTGTGCAGATCATAGAAGAACATCCCCCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CAA 90 bp ACCGTTGCTGTCAACTTCCTCACTTTTTCGTTTCAATCCACATTTTaGATATGGCTCAAGCAAAGAAACGTTGCTTCTGTGAGTCAGGGT +
Preference number: 6 (lower is better)
Translates to: TVAVNFLTFSFQSTF*IWLKQRNVASVSQG
Trigger: ACCCTGACTCACAGAAGCAACGTTTCTTTGCTTGAGCCATATCAAAAATGTGGATTGAAACGAAAAAGTGAGGAAGTTGACAGCAACGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CCA 72 bp ATCATTGACAGTGACATAACTGATGACATTAGACCTTaGCTTCAGTCCAGAGCTACTGGGCTTGTATTTGTT +
Preference number: 6 (lower is better)
Translates to: IIDSDITDDIRP*LQSRATGLVFV
Trigger: AACAAATACAAGCCCAGTAGCTCTGGACTGAAGCCAAGGTCTAATGTCATCAGTTATGTCACTGTCAATGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000340480.8
ENST00000361587.3
ENST00000369553.5
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CCA 72 bp CCTTCTAGTCTCTGCTTAAAGCTCACTTCTTCAGTGTaGCAGAGGCTGTTGCTTTGTATCAAAATCAATAGT +
Preference number: 6 (lower is better)
Translates to: PSSLCLKLTSSV*QRLLLCIKINS
Trigger: ACTATTGATTTTGATACAAAGCAACAGCCTCTGCCACACTGAAGAAGTGAGCTTTAAGCAGAGACTAGAAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503968.1
ENST00000514621.5
CDS CCA 72 bp TTCCTCACTTTTTCGTTTCAATCCACATTTTTGATATaGCTCAAGCAAAGAAACGTTGCTTCTGTGAGTCAG +
Preference number: 6 (lower is better)
Translates to: FLTFSFQSTFLI*LKQRNVASVSQ
Trigger: CTGACTCACAGAAGCAACGTTTCTTTGCTTGAGCCATATCAAAAATGTGGATTGAAACGAAAAAGTGAGGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000369555.6
ENST00000369558.5
ENST00000369559.8
ENST00000369561.8
ENST00000426820.7
ENST00000626993.2
CDS CAA 72 bp TGCTTAAAGCTCACTTCTTCAGTGTGGCAGAGGCTGTaGCTTTGTATCAAAATCAATAGTTCACTTAGATTT +
Preference number: 6 (lower is better)
Translates to: CLKLTSSVWQRL*LCIKINSSLRF
Trigger: AAATCTAAGTGAACTATTGATTTTGATACAAAGCAACAGCCTCTGCCACACTGAAGAAGTGAGCTTTAAGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000503968.1
ENST00000514621.5