RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HIP1 (Homo sapiens)

Ensembl gene IDs: ENSG00000127946

Ensembl transcript IDs: ENST00000336926.11, ENST00000404944.3, ENST00000420909.1, ENST00000434438.6, ENST00000479835.1, ENST00000485723.1, ENST00000616821.4

Found 1089 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCAGCTCCGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTaGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCAG +
Preference number: 1 (lower is better)
Translates to: AAPPDPGAWTGWAST*SVWRRRWSTERPGQ
Trigger: CTGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCGGAGCTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp CCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTaGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCAGCACCATCGC +
Preference number: 1 (lower is better)
Translates to: PDPGAWTGWASTWSV*RRRWSTERPGQHHR
Trigger: GCGATGGTGCTGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp AGCTGTCACTCAGCAGCTCCGCCTGACCCTGGAGCATGGACTGGGTaGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAG +
Preference number: 1 (lower is better)
Translates to: SCHSAAPPDPGAWTG*ASTWSVWRRRWSTE
Trigger: CTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCGGAGCTGCTGAGTGACAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR GCA 90 bp AGGAAAAGTGCTGTTGGGCTGCCCATCCCTGGCAAGCTGTTCATGTaGCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGG +
Preference number: 1 (lower is better)
Translates to: RKSAVGLPIPGKLFM*PLSSSCPQGSESLG
Trigger: CCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTGCCAGGGATGGGCAGCCCAACAGCACTTTTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp TTTGAGGAAAGCTGTCACTCAGCAGCTCCGCCTGACCCTGGAGCATaGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGG +
Preference number: 1 (lower is better)
Translates to: FEESCHSAAPPDPGA*TGWASTWSVWRRRW
Trigger: CCATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCGGAGCTGCTGAGTGACAGCTTTCCTCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR GCA 90 bp AATAGTCAGCAGGACTGGATGTTGGTCCTCTCTGTTGAGTGGCCCTaGCCCCCACCACCCCTCTTCGTACCTAGGCTTGCTCATGGGCAG +
Preference number: 1 (lower is better)
Translates to: NSQQDWMLVLSVEWP*PPPPLFVPRLAHGQ
Trigger: CTGCCCATGAGCAAGCCTAGGTACGAAGAGGGGTGGTGGGGGGCAGGGCCACTCAACAGAGAGGACCAACATCCAGTCCTGCTGACTATT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp TGGAAGTGTCATGCATGTCCTCGGCACTGGGTAATGGCAGTGGTGTaGCTGCCCCTGGGACTCCAAGGATTTGGCCTGTGGCTGGGGAAA +
Preference number: 1 (lower is better)
Translates to: WKCHACPRHWVMAVV*LPLGLQGFGLWLGK
Trigger: TTTCCCCAGCCACAGGCCAAATCCTTGGAGTCCCAGGGGCAGCCACACCACTGCCATTACCCAGTGCCGAGGACATGCATGACACTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp GACGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTaGGCCAAGGGAGACGGCCCGCTTGACAGAGACCATTCACGGACA +
Preference number: 1 (lower is better)
Translates to: DVCRKELGITPTLRL*AKGDGPLDRDHSRT
Trigger: TGTCCGTGAATGGTCTCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp CAGCTGGCTGGTTTGCTGCGCCGATGGCTGGCAGGTCCGTGGTGGTaGTTTTCTATGCTACAGGTGGTGCAGTCTCTGGAGGACAAGGAT +
Preference number: 1 (lower is better)
Translates to: QLAGLLRRWLAGPWW*FSMLQVVQSLEDKD
Trigger: ATCCTTGTCCTCCAGAGACTGCACCACCTGTAGCATAGAAAACCACCACCACGGACCTGCCAGCCATCGGCGCAGCAAACCAGCCAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR CCA 90 bp AGCAAACAGCTGGCTGGTTTGCTGCGCCGATGGCTGGCAGGTCCGTaGTGGTGGTTTTCTATGCTACAGGTGGTGCAGTCTCTGGAGGAC +
Preference number: 1 (lower is better)
Translates to: SKQLAGLLRRWLAGP*WWFSMLQVVQSLED
Trigger: GTCCTCCAGAGACTGCACCACCTGTAGCATAGAAAACCACCACCACGGACCTGCCAGCCATCGGCGCAGCAAACCAGCCAGCTGTTTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR CCA 90 bp ATTTGGTCTGGACCTGGGAGAGGAAGGAATTTGGCAGCAAACAGCTaGCTGGTTTGCTGCGCCGATGGCTGGCAGGTCCGTGGTGGTGGT +
Preference number: 1 (lower is better)
Translates to: IWSGPGRGRNLAANS*LVCCADGWQVRGGG
Trigger: ACCACCACCACGGACCTGCCAGCCATCGGCGCAGCAAACCAGCCAGCTGTTTGCTGCCAAATTCCTTCCTCTCCCAGGTCCAGACCAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR TCA 90 bp AATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTaGCAGAGACCATTCACGGACAGTTCATTCCGGCAGGGAAGTAGT +
Preference number: 1 (lower is better)
Translates to: NHSHTPSLGQGRRPA*QRPFTDSSFRQGSS
Trigger: ACTACTTCCCTGCCGGAATGAACTGTCCGTGAATGGTCTCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR GCA 90 bp GATGGCTGGCAGGTCCGTGGTGGTGGTTTTCTATGCTACAGGTGGTaGAGTCTCTGGAGGACAAGGATGGCAGAGAGAGGGCAAAGCCAG +
Preference number: 1 (lower is better)
Translates to: DGWQVRGGGFLCYRW*SLWRTRMAERGQSQ
Trigger: CTGGCTTTGCCCTCTCTCTGCCATCCTTGTCCTCCAGAGACTGCACCACCTGTAGCATAGAAAACCACCACCACGGACCTGCCAGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR CCA 90 bp TGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTGAAAGGAGTTaGAGCCGCTGGCTCTGTCCTTTCTCATTTTCTCTGACCCAAGAG +
Preference number: 1 (lower is better)
Translates to: CPQGSESLGHVAERS*SRWLCPFSFSLTQE
Trigger: CTCTTGGGTCAGAGAAAATGAGAAAGGACAGAGCCAGCGGCTCCAACTCCTTTCAGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp CTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTaGCTGAAAGGAGTTGGAGCCGCTGGCTCTGTCCTTTCTCATTTT +
Preference number: 1 (lower is better)
Translates to: LCPHPVHRAARAWGM*LKGVGAAGSVLSHF
Trigger: AAAATGAGAAAGGACAGAGCCAGCGGCTCCAACTCCTTTCAGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp AAACAGCTGGCTGGTTTGCTGCGCCGATGGCTGGCAGGTCCGTGGTaGTGGTTTTCTATGCTACAGGTGGTGCAGTCTCTGGAGGACAAG +
Preference number: 1 (lower is better)
Translates to: KQLAGLLRRWLAGPW*WFSMLQVVQSLEDK
Trigger: CTTGTCCTCCAGAGACTGCACCACCTGTAGCATAGAAAACCACCACCACGGACCTGCCAGCCATCGGCGCAGCAAACCAGCCAGCTGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR TCA 90 bp AGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCTaGCCGGAGCGACATGTACCTGTGATTCCCGTGTTACCTGGTGGC +
Preference number: 1 (lower is better)
Translates to: RTSSCTGSRGQSQLI*PERHVPVIPVLPGG
Trigger: GCCACCAGGTAACACGGGAATCACAGGTACATGTCGCTCCGGTCAGATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp CGCTATGGAGGGAGTCTTTGGAAGTGTCATGCATGTCCTCGGCACTaGGTAATGGCAGTGGTGTGGCTGCCCCTGGGACTCCAAGGATTT +
Preference number: 1 (lower is better)
Translates to: RYGGSLWKCHACPRH*VMAVVWLPLGLQGF
Trigger: AAATCCTTGGAGTCCCAGGGGCAGCCACACCACTGCCATTACCCAGTGCCGAGGACATGCATGACACTTCCAAAGACTCCCTCCATAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp GCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTaGCATTCACAGCCAGGACACTCCTGCCGTCCTTCTGACTGTGCA +
Preference number: 1 (lower is better)
Translates to: AVEIHGTAQRGGEWL*HSQPGHSCRPSDCA
Trigger: TGCACAGTCAGAAGGACGGCAGGAGTGTCCTGGCTGTGAATGCCAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp TTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTaGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCC +
Preference number: 1 (lower is better)
Translates to: FLFKRMPRQTSAERS*ESLPHSVSGPRETA
Trigger: GGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp GGCAGCGAGAGCCTGGGGCATGTGGCTGAAAGGAGTTGGAGCCGCTaGCTCTGTCCTTTCTCATTTTCTCTGACCCAAGAGCTCCAAATG +
Preference number: 1 (lower is better)
Translates to: GSESLGHVAERSWSR*LCPFSFSLTQELQM
Trigger: CATTTGGAGCTCTTGGGTCAGAGAAAATGAGAAAGGACAGAGCCAGCGGCTCCAACTCCTTTCAGCCACATGCCCCAGGCTCTCGCTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR GCA 90 bp CAAACAGAAAGGGTGTCGCTATGGAGGGAGTCTTTGGAAGTGTCATaGATGTCCTCGGCACTGGGTAATGGCAGTGGTGTGGCTGCCCCT +
Preference number: 1 (lower is better)
Translates to: QTERVSLWRESLEVS*MSSALGNGSGVAAP
Trigger: AGGGGCAGCCACACCACTGCCATTACCCAGTGCCGAGGACATGCATGACACTTCCAAAGACTCCCTCCATAGCGACACCCTTTCTGTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp CAGGTCCGTGGTGGTGGTTTTCTATGCTACAGGTGGTGCAGTCTCTaGAGGACAAGGATGGCAGAGAGAGGGCAAAGCCAGTTTGCTTGG +
Preference number: 1 (lower is better)
Translates to: QVRGGGFLCYRWCSL*RTRMAERGQSQFAW
Trigger: CCAAGCAAACTGGCTTTGCCCTCTCTCTGCCATCCTTGTCCTCCAGAGACTGCACCACCTGTAGCATAGAAAACCACCACCACGGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR TCA 90 bp TGGCCAGCCTGGATGCTAACTAGGGAGGCGGGAAAAGAACAGAGATaGCCATGGGTCCAAACAGAAAGGGTGTCGCTATGGAGGGAGTCT +
Preference number: 1 (lower is better)
Translates to: WPAWMLTREAGKEQR*PWVQTERVSLWRES
Trigger: AGACTCCCTCCATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCTCCCTAGTTAGCATCCAGGCTGGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR GCA 90 bp CAAAGAGGGGGAGAATGGCTTTGGCATTCACAGCCAGGACACTCCTaGCGTCCTTCTGACTGTGCAGATCTCAGGGTAGTGTCCTGGTTT +
Preference number: 1 (lower is better)
Translates to: QRGGEWLWHSQPGHS*RPSDCADLRVVSWF
Trigger: AAACCAGGACACTACCCTGAGATCTGCACAGTCAGAAGGACGGCAGGAGTGTCCTGGCTGTGAATGCCAAAGCCATTCTCCCCCTCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR GCA 90 bp AGGTGGAACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTaGAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCC +
Preference number: 1 (lower is better)
Translates to: RWNDLPIQEDAKADV*RKELGITPTLRLWA
Trigger: GGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTTCCACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR GCA 90 bp CAGTCTCTGGAGGACAAGGATGGCAGAGAGAGGGCAAAGCCAGTTTaGTTGGAAAGCCAATGTTGGAACTGGAGGCTTTCCCTGGCAGGA +
Preference number: 1 (lower is better)
Translates to: QSLEDKDGRERAKPV*LESQCWNWRLSLAG
Trigger: TCCTGCCAGGGAAAGCCTCCAGTTCCAACATTGGCTTTCCAAGCAAACTGGCTTTGCCCTCTCTCTGCCATCCTTGTCCTCCAGAGACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR CCA 90 bp GACCATGGGTCCAAACAGAAAGGGTGTCGCTATGGAGGGAGTCTTTaGAAGTGTCATGCATGTCCTCGGCACTGGGTAATGGCAGTGGTG +
Preference number: 1 (lower is better)
Translates to: DHGSKQKGCRYGGSL*KCHACPRHWVMAVV
Trigger: CACCACTGCCATTACCCAGTGCCGAGGACATGCATGACACTTCCAAAGACTCCCTCCATAGCGACACCCTTTCTGTTTGGACCCATGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp ACAGTGGTTCTTCCAGCCACTGGGTTAGAGGGACCCGTATTCTGGTaGGATTTTAGGGGTACTGCTATGGACGGCTGCATCAGCAGACAA +
Preference number: 1 (lower is better)
Translates to: TVVLPATGLEGPVFW*DFRGTAMDGCISRQ
Trigger: TTGTCTGCTGATGCAGCCGTCCATAGCAGTACCCCTAAAATCCCACCAGAATACGGGTCCCTCTAACCCAGTGGCTGGAAGAACCACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp CTCTGGAGGACAAGGATGGCAGAGAGAGGGCAAAGCCAGTTTGCTTaGAAAGCCAATGTTGGAACTGGAGGCTTTCCCTGGCAGGATTTC +
Preference number: 1 (lower is better)
Translates to: LWRTRMAERGQSQFA*KANVGTGGFPWQDF
Trigger: GAAATCCTGCCAGGGAAAGCCTCCAGTTCCAACATTGGCTTTCCAAGCAAACTGGCTTTGCCCTCTCTCTGCCATCCTTGTCCTCCAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR TCA 90 bp AGAATGGCTTTGGCATTCACAGCCAGGACACTCCTGCCGTCCTTCTaGCTGTGCAGATCTCAGGGTAGTGTCCTGGTTTGGAATCCATCA +
Preference number: 1 (lower is better)
Translates to: RMALAFTARTLLPSF*LCRSQGSVLVWNPS
Trigger: TGATGGATTCCAAACCAGGACACTACCCTGAGATCTGCACAGTCAGAAGGACGGCAGGAGTGTCCTGGCTGTGAATGCCAAAGCCATTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp CACTCCTGCCGTCCTTCTGACTGTGCAGATCTCAGGGTAGTGTCCTaGTTTGGAATCCATCAGCCCTCTGATGCTCACAAGTTTGTGCAA +
Preference number: 1 (lower is better)
Translates to: HSCRPSDCADLRVVS*FGIHQPSDAHKFVQ
Trigger: TTGCACAAACTTGTGAGCATCAGAGGGCTGATGGATTCCAAACCAGGACACTACCCTGAGATCTGCACAGTCAGAAGGACGGCAGGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp CTAGCCACTTTTGGAAATGTTGACCCGCATCAAGAACACACCGATTaGTTTAGTTGCCACAACTGGGACAGGGAAGCCACGCACCATTCC +
Preference number: 1 (lower is better)
Translates to: LATFGNVDPHQEHTD*FSCHNWDREATHHS
Trigger: GGAATGGTGCGTGGCTTCCCTGTCCCAGTTGTGGCAACTAAACCAATCGGTGTGTTCTTGATGCGGGTCAACATTTCCAAAAGTGGCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR TCA 90 bp TTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTaGTTCTTGAAGGCTGATGTAGCCGGGCAGAAAGATGAGCCTTGC +
Preference number: 1 (lower is better)
Translates to: FGIQVSNSPAPWPFF*FLKADVAGQKDEPC
Trigger: GCAAGGCTCATCTTTCTGCCCGGCTACATCAGCCTTCAAGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR TCA 90 bp TTGTTTCCTGTTGCTTTGGCTCCTGACAACACCACGGTGTGGTGCTaGTCTTGTATTTGGTCTGGACCTGGGAGAGGAAGGAATTTGGCA +
Preference number: 1 (lower is better)
Translates to: LFPVALAPDNTTVWC*SCIWSGPGRGRNLA
Trigger: TGCCAAATTCCTTCCTCTCCCAGGTCCAGACCAAATACAAGATCAGCACCACACCGTGGTGTTGTCAGGAGCCAAAGCAACAGGAAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR CCA 90 bp GATGGCAGAGAGAGGGCAAAGCCAGTTTGCTTGGAAAGCCAATGTTaGAACTGGAGGCTTTCCCTGGCAGGATTTCCAGAGATTTGGAAA +
Preference number: 1 (lower is better)
Translates to: DGRERAKPVCLESQC*NWRLSLAGFPEIWK
Trigger: TTTCCAAATCTCTGGAAATCCTGCCAGGGAAAGCCTCCAGTTCCAACATTGGCTTTCCAAGCAAACTGGCTTTGCCCTCTCTCTGCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR TCA 90 bp GTACCTGTGATTCCCGTGTTACCTGGTGGCATAAACCTTGGTGTCTaGCTTGGTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAG +
Preference number: 1 (lower is better)
Translates to: VPVIPVLPGGINLGV*LGSWDSSKKSCSRQ
Trigger: CTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTACCAAGTCAGACACCAAGGTTTATGCCACCAGGTAACACGGGAATCACAGGTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp GAGCAATTGCATCTGATCTTCCGGGTTTGTCAATTGCGTAGAAGGTaGAACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGC +
Preference number: 1 (lower is better)
Translates to: EQLHLIFRVCQLRRR*NDLPIQEDAKADVC
Trigger: GCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTTCCACCTTCTACGCAATTGACAAACCCGGAAGATCAGATGCAATTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR TCA 90 bp AGCAAACCAAGTATAGGGTTCTTCCCTGATGGGAGCAATTGCATCTaGTCTTCCGGGTTTGTCAATTGCGTAGAAGGTGGAACGATCTTC +
Preference number: 1 (lower is better)
Translates to: SKPSIGFFPDGSNCI*SSGFVNCVEGGTIF
Trigger: GAAGATCGTTCCACCTTCTACGCAATTGACAAACCCGGAAGATCAGATGCAATTGCTCCCATCAGGGAAGAACCCTATACTTGGTTTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR GCA 90 bp GGACCCGTATTCTGGTGGGATTTTAGGGGTACTGCTATGGACGGCTaGATCAGCAGACAATCTAAACTAGTCTCATTTAAACTCCTTGCT +
Preference number: 1 (lower is better)
Translates to: GPVFWWDFRGTAMDG*ISRQSKLVSFKLLA
Trigger: AGCAAGGAGTTTAAATGAGACTAGTTTAGATTGTCTGCTGATGCAGCCGTCCATAGCAGTACCCCTAAAATCCCACCAGAATACGGGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 90 bp CTCTCAGAATCGAACCCAACAGCATTGAATTGTTTCCTGTTGCTTTaGCTCCTGACAACACCACGGTGTGGTGCTGATCTTGTATTTGGT +
Preference number: 1 (lower is better)
Translates to: LSESNPTALNCFLLL*LLTTPRCGADLVFG
Trigger: ACCAAATACAAGATCAGCACCACACCGTGGTGTTGTCAGGAGCCAAAGCAACAGGAAACAATTCAATGCTGTTGGGTTCGATTCTGAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR-3UTR GCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCATCTGTTGAGTGGCCCTaGCCCCCACCACCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: GQHLVSVEAEMEHREAWASVEWP*PPPPLF
Trigger: GAAGAGGGGTGGTGGGGGGCAGGGCCACTCAACAGA...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR GCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCTCAGCCCCAGGGGTGTaGCCTTTGGGAGAGTTGGCT +
Preference number: 2 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGSAPGV*PLGELA
Trigger: AGCCAACTCTCCCAAAGGGCACACCCCTGGGGCTGA...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR GCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCACAGCCAGGACACTCCTaGCGTCCTTCTGACTGTGCA +
Preference number: 2 (lower is better)
Translates to: GQHLVSVEAEMEHREAWAQPGHS*RPSDCA
Trigger: TGCACAGTCAGAAGGACGGCAGGAGTGTCCTGGCTG...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGAGGGTGGGCCAGCACTTaGTCAGTGTGGAGGCGGAGA +
Preference number: 2 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRGWAST*SVWRRR
Trigger: TCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCC...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTGGAGCATGGACTGGGTaGGCCAGCACTTGGTCAGTG +
Preference number: 2 (lower is better)
Translates to: CPLSSSCPQGSESLGHVAGAWTG*ASTWSV
Trigger: CACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCC...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTTGGTGTGGCTGCCCCTaGGACTCCAAGGATTTGGCC +
Preference number: 2 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLWCGCP*DSKDLA
Trigger: GGCCAAATCCTTGGAGTCCCAGGGGCAGCCACACCA...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCAAGCAGTGGAAATCCATaGCACTGCCCAAAGAGGGGG +
Preference number: 2 (lower is better)
Translates to: GQHLVSVEAEMEHREAWASSGNP*HCPKRG
Trigger: CCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCT...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATTGGAGCTACCACAGTTaGGGGGCCCTGGAGACTCAG +
Preference number: 2 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDWSYHS*GALETQ
Trigger: CTGAGTCTCCAGGGCCCCCCAACTGTGGTAGCTCCA...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGAGTAATGGCAGTGGTGTaGCTGCCCCTGGGACTCCAA +
Preference number: 2 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRVMAVV*LPLGLQ
Trigger: TTGGAGTCCCAGGGGCAGCCACACCACTGCCATTAC...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGACAGGGGTGTGCCCTTTaGGAGAGTTGGCTATGTGAG +
Preference number: 2 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRQGCAL*ESWLCE
Trigger: CTCACATAGCCAACTCTCCCAAAGGGCACACCCCTG...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGGGAGCATGGACTGGGTaGGCCAGCACTTGGTCAGTG +
Preference number: 2 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGGAWTG*ASTWSV
Trigger: CACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCC...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATCCCTGGAGCATGGACTaGGTGGGCCAGCACTTGGTC +
Preference number: 2 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDPWSMD*VGQHLV
Trigger: GACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGG...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGGGGAACTGGGCTGTGTaGACCCTCTTGTCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGGNWAV*TLLSLF
Trigger: AAAGAGGGACAAGAGGGTTCACACAGCCCAGTTCCC...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTGGATACCCATTGTTGTaGGGGTCAAATAGTCAGCAG +
Preference number: 2 (lower is better)
Translates to: CPLSSSCPQGSESLGHVAGYPLL*GSNSQQ
Trigger: CTGCTGACTATTTGACCCCCACAACAATGGGTATCC...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGGAGAATGGCTTTaGCATTCACAGCCAGGACAC +
Preference number: 2 (lower is better)
Translates to: QAVHVPSVLILSTGQREPGGEWL*HSQPGH
Trigger: GTGTCCTGGCTGTGAATGCCAAAGCCATTCTCCCCC...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACCCCACACTCCGTCTCTaGGCCAAGGGAGACGGCCCG +
Preference number: 2 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHPTLRL*AKGDGP
Trigger: CGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGG...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CAA 90 bp CTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTaGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGC +
Preference number: 2 (lower is better)
Translates to: LPIQEDAKADVCRKE*GITPTLRLWAKGDG
Trigger: GCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATGCTCATGGGCAGCACTaGCCAGCCTGGATGCTAACT +
Preference number: 2 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDAHGQH*PAWMLT
Trigger: AGTTAGCATCCAGGCTGGCCAGTGCTGCCCATGAGC...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTAATAGTCAGCAGGACTaGATGTTGGTCCTCTCTGTT +
Preference number: 2 (lower is better)
Translates to: CPLSSSCPQGSESLGHVANSQQD*MLVLSV
Trigger: AACAGAGAGGACCAACATCCAGTCCTGCTGACTATT...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATAGCACTTGGTCAGTGTaGAGGCGGAGATGGAGCACC +
Preference number: 2 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDSTWSV*RRRWST
Trigger: GGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCT...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACCCTGGGGCATGTGGCTaGAAGGAGTTGGAGCCGCTG +
Preference number: 2 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHPGACG*KELEPL
Trigger: CAGCGGCTCCAACTCCTTTCAGCCACATGCCCCAGG...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR GCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGTCTGTTGAGTGGCCCTaGCCCCCACCACCCCTCTTC +
Preference number: 2 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWSVEWP*PPPPLF
Trigger: GAAGAGGGGTGGTGGGGGGCAGGGCCACTCAACAGA...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR GCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCACAATCAGGGCTGACTaGAGCCTCGACTTCCCAAGC +
Preference number: 2 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLITIRAD*SLDFPS
Trigger: GCTTGGGAAGTCGAGGCTGCAGTCAGCCCTGATTGT...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATTATGGAGGGAGTCTTTaGAAGTGTCATGCATGTCCT +
Preference number: 2 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDYGGSL*KCHACP
Trigger: AGGACATGCATGACACTTCCAAAGACTCCCTCCATA...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGAGCACCGAGAGGCCTaGGCAGCACCATCGCTGGAG +
Preference number: 2 (lower is better)
Translates to: NDLPIQEDAKADVCRKELEHREA*AAPSLE
Trigger: CTCCAGCGATGGTGCTGCCCAGGCCTCTCGGTGCTC...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATGAGGAAAAGTGCTGTTaGGCTGCCCATCCCTGGCAA +
Preference number: 2 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDEEKCC*AAHPWQ
Trigger: TTGCCAGGGATGGGCAGCCCAACAGCACTTTTCCTC...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR GCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGCAGTGGTGTGGCTaGCCCTGGGACTCCAAGGAT +
Preference number: 2 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHWQWCG*PWDSKD
Trigger: ATCCTTGGAGTCCCAGGGGCAGCCACACCACTGCCA...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR GCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATGCCAAGGCAGACGTCTaGAGAAAGGAGTTGGGAATC +
Preference number: 2 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDAKADV*RKELGI
Trigger: GATTCCCAACTCCTTTCTGCAGACGTCTGCCTTGGC...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR GCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTCACCCAGGCCGGAGTaGACTGGCACAATCAGGGCT +
Preference number: 2 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHSPRPE*TGTIRA
Trigger: AGCCCTGATTGTGCCAGTGCACTCCGGCCTGGGTGA...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACCAGCACTGGCCAGCCTaGATGCTAACTAGGGAGGCG +
Preference number: 2 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHQHWPA*MLTREA
Trigger: CGCCTCCCTAGTTAGCATCCAGGCTGGCCAGTGCTG...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTCCCTGGAGCATGGACTaGGTGGGCCAGCACTTGGTC +
Preference number: 2 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSPWSMD*VGQHLV
Trigger: GACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGG...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGCCTGACCCTGGAGCATaGACTGGGTGGGCCAGCACT +
Preference number: 2 (lower is better)
Translates to: NDLPIQEDAKADVCRKELPDPGA*TGWAST
Trigger: AGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGG...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCGGTTCTTCCAGCCACTaGGTTAGAGGGACCCGTATT +
Preference number: 2 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLIGSSSH*VRGTRI
Trigger: AATACGGGTCCCTCTAACCCAGTGGCTGGAAGAACC...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CAA 90 bp GGATTCAGCTTTAGGAGGGAAAGGCACTCACTCTCCTTCTGCTTTTaGAGGAAAGCTGTCACTCAGCAGCTCCGCCTGACCCTGGAGCAT +
Preference number: 2 (lower is better)
Translates to: GFSFRRERHSLSFCF*RKAVTQQLRLTLEH
Trigger: ATGCTCCAGGGTCAGGCGGAGCTGCTGAGTGACAGCTTTCCTCAAAAAGCAGAAGGAGAGTGAGTGCCTTTCCCTCCTAAAGCTGAATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATAACAAGGATTTACACTaGCATATGGGGTGTTGGTTT +
Preference number: 2 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDNKDLH*HMGCWF
Trigger: AAACCAACACCCCATATGTCAGTGTAAATCCTTGTT...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTAACAAGGATTTACACTaGCATATGGGGTGTTGGTTT +
Preference number: 2 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLNKDLH*HMGCWF
Trigger: AAACCAACACCCCATATGTCAGTGTAAATCCTTGTT...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR GCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCGTCCCACTTAGAAAATaGACAGAGAGGGAGTTGGGG +
Preference number: 2 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLIVPLRK*TERELG
Trigger: CCCCAACTCCCTCTCTGTGCATTTTCTAAGTGGGAC...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGGTAATGGCAGTGGTGTaGCTGCCCCTGGGACTCCAA +
Preference number: 2 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWVMAVV*LPLGLQ
Trigger: TTGGAGTCCCAGGGGCAGCCACACCACTGCCATTAC...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACGCTCATGGGCAGCACTaGCCAGCCTGGATGCTAACT +
Preference number: 2 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHAHGQH*PAWMLT
Trigger: AGTTAGCATCCAGGCTGGCCAGTGCTGCCCATGAGC...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGGGGGAGAATGGCTTTaGCATTCACAGCCAGGACAC +
Preference number: 2 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWGGEWL*HSQPGH
Trigger: GTGTCCTGGCTGTGAATGCCAAAGCCATTCTCCCCC...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATCAAAGAGGGGGAGAATaGCTTTGGCATTCACAGCCA +
Preference number: 2 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDQRGGE*LWHSQP
Trigger: TGGCTGTGAATGCCAAAGCCATTCTCCCCCTCTTTG...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGAGCACTTGGTCAGTGTaGAGGCGGAGATGGAGCACC +
Preference number: 2 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWSTWSV*RRRWST
Trigger: GGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCT...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATTGTTGGAGCAGATCCTaGGAAGTGCTTGATGGCTAC +
Preference number: 2 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDCWSRS*EVLDGY
Trigger: GTAGCCATCAAGCACTTCCCAGGATCTGCTCCAACA...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGCTCCTGCCGTCCTTCTaGCTGTGCAGATCTCAGGGT +
Preference number: 2 (lower is better)
Translates to: PISSADTSLAQYGGHTSELLPSF*LCRSQG
Trigger: ACCCTGAGATCTGCACAGTCAGAAGGACGGCAGGAG...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATTCTCCTTCTGCTTTTTaGGGAAAGCTGTCACTCAGC +
Preference number: 2 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDSPSAF*GKLSLS
Trigger: GCTGAGTGACAGCTTTCCTCAAAAAGCAGAAGGAGA...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR GCA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGATCAGCCCCAGGGGTGTaGCCTTTGGGAGAGTTGGCT +
Preference number: 2 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRSAPGV*PLGELA
Trigger: AGCCAACTCTCCCAAAGGGCACACCCCTGGGGCTGA...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR GCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATACCGATTGGTTTAGTTaGCACAACTGGGACAGGGAA +
Preference number: 2 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDTDWFS*HNWDRE
Trigger: TTCCCTGTCCCAGTTGTGGCAACTAAACCAATCGGT...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR GCA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGTCACTCAGGCTGGAGTaGAGTGGGAAATCATGGCTC +
Preference number: 2 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWSLRLE*SGKSWL
Trigger: GAGCCATGATTTCCCACTGCACTCCAGCCTGAGTGA...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGCAGGGGTGTGCCCTTTaGGAGAGTTGGCTATGTGAG +
Preference number: 2 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWQGCAL*ESWLCE
Trigger: CTCACATAGCCAACTCTCCCAAAGGGCACACCCCTG...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCTGGAGCTACCACAGTTaGGGGGCCCTGGAGACTCAG +
Preference number: 2 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVWSYHS*GALETQ
Trigger: CTGAGTCTCCAGGGCCCCCCAACTGTGGTAGCTCCA...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR-3UTR CCA 90 bp AGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTGAGCACCGAGAGGCCTaGGCAGCACCATCGCTGGAG +
Preference number: 2 (lower is better)
Translates to: REVVLLISPAPFKHVIKFEHREA*AAPSLE
Trigger: CTCCAGCGATGGTGCTGCCCAGGCCTCTCGGTGCTC...AAACTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACGGTGGGCTAGGGAGATaGGGGTTGGTTCACAGTGAT +
Preference number: 2 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHGGLGR*GLVHSD
Trigger: ATCACTGTGAACCAACCCCCATCTCCCTAGCCCACC...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CAA 90 bp GGATGGCAGAGAGAGGGCAAAGCCAGTTTGCTTGGAAAGCCAATGTaGGAACTGGAGGCTTTCCCTGGCAGGATTTCCAGAGATTTGGAA +
Preference number: 2 (lower is better)
Translates to: GWQREGKASLLGKPM*ELEAFPGRISRDLE
Trigger: TTCCAAATCTCTGGAAATCCTGCCAGGGAAAGCCTCCAGTTCCAACATTGGCTTTCCAAGCAAACTGGCTTTGCCCTCTCTCTGCCATCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR-3UTR TCA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTGGGAACTGGGCTGTGTaGACCCTCTTGTCCCTCTTT +
Preference number: 2 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSGNWAV*TLLSLF
Trigger: AAAGAGGGACAAGAGGGTTCACACAGCCCAGTTCCC...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGAGCCGGGCAGAAAGATaGGCCTTGCTAGAGTCACAC +
Preference number: 2 (lower is better)
Translates to: PISSADTSLAQYGGHTSESRAER*ALLESH
Trigger: GTGTGACTCTAGCAAGGCTCATCTTTCTGCCCGGCT...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACCTCAGGGTAGTGTCCTaGTTTGGAATCCATCAGCCC +
Preference number: 2 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHLRVVS*FGIHQP
Trigger: GGGCTGATGGATTCCAAACCAGGACACTACCCTGAG...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp AGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTCCTGACCCTGGAGCATaGACTGGGTGGGCCAGCACT +
Preference number: 2 (lower is better)
Translates to: REVVLLISPAPFKHVIKFPDPGA*TGWAST
Trigger: AGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGG...AAACTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGGGTGGGCTAGGGAGATaGGGGTTGGTTCACAGTGAT +
Preference number: 2 (lower is better)
Translates to: PISSADTSLAQYGGHTSEGGLGR*GLVHSD
Trigger: ATCACTGTGAACCAACCCCCATCTCCCTAGCCCACC...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTTTAGTTGCCACAACTaGGACAGGGAAGCCACGCAC +
Preference number: 2 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHFSCHN*DREATH
Trigger: GTGCGTGGCTTCCCTGTCCCAGTTGTGGCAACTAAA...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGCAACCTCTGCCTCTaGGGTTCAGGTGATTCTCCT +
Preference number: 2 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHCNLCL*GSGDSP
Trigger: AGGAGAATCACCTGAACCCCAGAGGCAGAGGTTGCA...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACGCAATCATCCCGTCTTaGCCTCCCAAAGTTCTGGGA +
Preference number: 2 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHAIIPS*PPKVLG
Trigger: TCCCAGAACTTTGGGAGGCCAAGACGGGATGATTGC...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATCTCCTTCTGCTTTTTaGGGAAAGCTGTCACTCAGC +
Preference number: 2 (lower is better)
Translates to: SRTVHSGREVVLLISPAPSPSAF*GKLSLS
Trigger: GCTGAGTGACAGCTTTCCTCAAAAAGCAGAAGGAGA...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCAGCCGGGCAGAAAGATaGGCCTTGCTAGAGTCACAC +
Preference number: 2 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVSRAER*ALLESH
Trigger: GTGTGACTCTAGCAAGGCTCATCTTTCTGCCCGGCT...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR-3UTR CCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGGATTTGGCCTGTGGCTaGGGAAATAACACACACGAG +
Preference number: 2 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWDLACG*GNNTHE
Trigger: CTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTCCCACACTCCGTCTCTaGGCCAAGGGAGACGGCCCG +
Preference number: 2 (lower is better)
Translates to: YKITLPRWLFSSISFSLSPTLRL*AKGDGP
Trigger: CGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGG...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CAA 90 bp GTTGCTGTCCCATCTTGTCATGACCCATTTACGCTCACCCGAGACTaGTCACTAGTGATGCTCAGTGACTCATTTAGAAGGCTTGCAGGT +
Preference number: 2 (lower is better)
Translates to: VAVPSCHDPFTLTRD*SLVMLSDSFRRLAG
Trigger: ACCTGCAAGCCTTCTAAATGAGTCACTGAGCATCACTAGTGACAAGTCTCGGGTGAGCGTAAATGGGTCATGACAAGATGGGACAGCAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACAATCCATCAGCCCTCTaGTGCTCACAAGTTTGTGCA +
Preference number: 2 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHNPSAL*CSQVCA
Trigger: TGCACAAACTTGTGAGCATCAGAGGGCTGATGGATT...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTGGGAGACGGCCCGCTTaGCAGAGACCATTCACGGAC +
Preference number: 2 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSGRRPA*QRPFTD
Trigger: GTCCGTGAATGGTCTCTGTCAAGCGGGCCGTCTCCC...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGATCCTGGGAAGTGCTTaGTGGCTACCACCAATGAGT +
Preference number: 2 (lower is better)
Translates to: PISSADTSLAQYGGHTSEILGSA*WLPPMS
Trigger: ACTCATTGGTGGTAGCCATCAAGCACTTCCCAGGAT...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCTGTCCCATCTTGTCATaGCCCATTTACGCTCACCCG +
Preference number: 2 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVCPILS*PIYAHP
Trigger: CGGGTGAGCGTAAATGGGTCATGACAAGATGGGACA...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR-3UTR GCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGGCAGATCCTGGGAAGTaGTTGATGGCTACCACCAAT +
Preference number: 2 (lower is better)
Translates to: PISSADTSLAQYGGHTSEADPGK*LMATTN
Trigger: ATTGGTGGTAGCCATCAAGCACTTCCCAGGATCTGC...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATATGGAGGGAGTCTTTaGAAGTGTCATGCATGTCCT +
Preference number: 2 (lower is better)
Translates to: SRTVHSGREVVLLISPAPYGGSL*KCHACP
Trigger: AGGACATGCATGACACTTCCAAAGACTCCCTCCATA...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATCAATTGCGTAGAAGGTaGAACGATCTTCCTATTCAA +
Preference number: 2 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDQLRRR*NDLPIQ
Trigger: TTGAATAGGAAGATCGTTCCACCTTCTACGCAATTG...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGCTAGCAATATTCTGTTaGAGCAGATCCTGGGAAGTG +
Preference number: 2 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWLAIFC*SRSWEV
Trigger: CACTTCCCAGGATCTGCTCCAACAGAATATTGCTAG...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCATAACCCTGCCAAGATaGCTCTTCTCTTCTATTTCT +
Preference number: 2 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLIITLPR*LFSSIS
Trigger: AGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTAT...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTGGGAGACGGCCCGCTTaGCAGAGACCATTCACGGAC +
Preference number: 2 (lower is better)
Translates to: YKITLPRWLFSSISFSLSGRRPA*QRPFTD
Trigger: GTCCGTGAATGGTCTCTGTCAAGCGGGCCGTCTCCC...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTTATAGGGTTCTTCCCTaGTGGGAGCAATTGCATCTG +
Preference number: 2 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSYRVLP*WEQLHL
Trigger: CAGATGCAATTGCTCCCATCAGGGAAGAACCCTATA...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGACCCAAGAGCTCCAAATaGTCTCCTTGCTTTGGGATC +
Preference number: 2 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRPKSSK*SPCFGI
Trigger: GATCCCAAAGCAAGGAGATCATTTGGAGCTCTTGGG...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTCCTGGGGCATGTGGCTaGAAGGAGTTGGAGCCGCTG +
Preference number: 2 (lower is better)
Translates to: YKITLPRWLFSSISFSLSPGACG*KELEPL
Trigger: CAGCGGCTCCAACTCCTTTCAGCCACATGCCCCAGG...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTTGGCACAATCAGGGCTaGCTGCAGCCTCGACTTCCC +
Preference number: 2 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSWHNQG*LQPRLP
Trigger: GGGAAGTCGAGGCTGCAGTCAGCCCTGATTGTGCCA...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR GCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGTCCGGGTTTGTCAATTaGGTAGAAGGTGGAACGATC +
Preference number: 2 (lower is better)
Translates to: PISSADTSLAQYGGHTSESGFVN*VEGGTI
Trigger: GATCGTTCCACCTTCTACGCAATTGACAAACCCGGA...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CAA 90 bp AGAGACCATTCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTaGATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTTTGAGC +
Preference number: 2 (lower is better)
Translates to: RDHSRTVHSGREVVL*ISPAPFKHVIKFLS
Trigger: GCTCAAAAACTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGAATGGTCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CAA 90 bp GACAGAGACCATTCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTaGTTGATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTTTG +
Preference number: 2 (lower is better)
Translates to: DRDHSRTVHSGREVV*LISPAPFKHVIKFL
Trigger: CAAAAACTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGAATGGTCTCTGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CAA 90 bp TGTCTGGAAAAATCTACTCTCAGAATCGAACCCAACAGCATTGAATaGTTTCCTGTTGCTTTGGCTCCTGACAACACCACGGTGTGGTGC +
Preference number: 2 (lower is better)
Translates to: CLEKSTLRIEPNSIE*FPVALAPDNTTVWC
Trigger: GCACCACACCGTGGTGTTGTCAGGAGCCAAAGCAACAGGAAACAATTCAATGCTGTTGGGTTCGATTCTGAGAGTAGATTTTTCCAGACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR-3UTR TCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGGGAAAAGAACAGAGATaGCCATGGGTCCAAACAGAA +
Preference number: 2 (lower is better)
Translates to: PISSADTSLAQYGGHTSEGKEQR*PWVQTE
Trigger: TTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCC...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGGAAAAGAACAGAGATaGCCATGGGTCCAAACAGAA +
Preference number: 2 (lower is better)
Translates to: NDLPIQEDAKADVCRKELGKEQR*PWVQTE
Trigger: TTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCC...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTCTCCTGCCGTCCTTCTaGCTGTGCAGATCTCAGGGT +
Preference number: 2 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSLLPSF*LCRSQG
Trigger: ACCCTGAGATCTGCACAGTCAGAAGGACGGCAGGAG...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCGGGGTTGGTTCACAGTaGTCAAACAGAAGTCTCACA +
Preference number: 2 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVGVGSQ*SNRSLT
Trigger: TGTGAGACTTCTGTTTGATCACTGTGAACCAACCCC...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR-3UTR GCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTTGGCAGTGGTGTGGCTaGCCCTGGGACTCCAAGGAT +
Preference number: 2 (lower is better)
Translates to: YKITLPRWLFSSISFSLSWQWCG*PWDSKD
Trigger: ATCCTTGGAGTCCCAGGGGCAGCCACACCACTGCCA...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR GCA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTCACTCACTCTCCTTCTaGTTTTTGAGGAAAGCTGTC +
Preference number: 2 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSHSLSF*FLRKAV
Trigger: GACAGCTTTCCTCAAAAAGCAGAAGGAGAGTGAGTG...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTAATAGTCAGCAGGACTaGATGTTGGTCCTCTCTGTT +
Preference number: 2 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSNSQQD*MLVLSV
Trigger: AACAGAGAGGACCAACATCCAGTCCTGCTGACTATT...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTGTGGCTGAAAGGAGTTaGAGCCGCTGGCTCTGTCCT +
Preference number: 2 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSVAERS*SRWLCP
Trigger: AGGACAGAGCCAGCGGCTCCAACTCCTTTCAGCCAC...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CAA 90 bp TTTCTCATTTTCTCTGACCCAAGAGCTCCAAATGATCTCCTTGCTTaGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCT +
Preference number: 2 (lower is better)
Translates to: FLIFSDPRAPNDLLA*GSKSVTVQHLGLSS
Trigger: AGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGCAAGGAGATCATTTGGAGCTCTTGGGTCAGAGAAAATGAGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CAA 90 bp AATCTACTCTCAGAATCGAACCCAACAGCATTGAATTGTTTCCTGTaGCTTTGGCTCCTGACAACACCACGGTGTGGTGCTGATCTTGTA +
Preference number: 2 (lower is better)
Translates to: NLLSESNPTALNCFL*LWLLTTPRCGADLV
Trigger: TACAAGATCAGCACCACACCGTGGTGTTGTCAGGAGCCAAAGCAACAGGAAACAATTCAATGCTGTTGGGTTCGATTCTGAGAGTAGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR-3UTR TCA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGATCACACCTGAAGTTCTaGTTGCTCCAAGCATCTCTT +
Preference number: 2 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRSHLKF*LLQASL
Trigger: AAGAGATGCTTGGAGCAATCAGAACTTCAGGTGTGA...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR GCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGAGAAGGTCACTTAAATaGTGGGGTCCATCTAGAAGA +
Preference number: 2 (lower is better)
Translates to: PISSADTSLAQYGGHTSERRSLK*WGPSRR
Trigger: TCTTCTAGATGGACCCCAGCATTTAAGTGACCTTCT...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR GCA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGAACTGCTATGGACGGCTaGATCAGCAGACAATCTAAA +
Preference number: 2 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRTAMDG*ISRQSK
Trigger: TTTAGATTGTCTGCTGATGCAGCCGTCCATAGCAGT...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTGAGGAAAAGTGCTGTTaGGCTGCCCATCCCTGGCAA +
Preference number: 2 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSEEKCC*AAHPWQ
Trigger: TTGCCAGGGATGGGCAGCCCAACAGCACTTTTCCTC...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CAA 90 bp AGACATGTCTGGAAAAATCTACTCTCAGAATCGAACCCAACAGCATaGAATTGTTTCCTGTTGCTTTGGCTCCTGACAACACCACGGTGT +
Preference number: 2 (lower is better)
Translates to: RHVWKNLLSESNPTA*NCFLLLWLLTTPRC
Trigger: ACACCGTGGTGTTGTCAGGAGCCAAAGCAACAGGAAACAATTCAATGCTGTTGGGTTCGATTCTGAGAGTAGATTTTTCCAGACATGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR-3UTR CCA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTGGGACTCCAAGGATTTaGCCTGTGGCTGGGGAAATA +
Preference number: 2 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSGTPRI*PVAGEI
Trigger: TATTTCCCCAGCCACAGGCCAAATCCTTGGAGTCCC...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGAACGAAAGTAATTATGTaGCATCTGACAGCTACTTCC +
Preference number: 2 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRTKVIM*HLTATS
Trigger: GGAAGTAGCTGTCAGATGTCACATAATTACTTTCGT...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTGGGACTCCAAGGATTTaGCCTGTGGCTGGGGAAATA +
Preference number: 2 (lower is better)
Translates to: YKITLPRWLFSSISFSLSGTPRI*PVAGEI
Trigger: TATTTCCCCAGCCACAGGCCAAATCCTTGGAGTCCC...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR TCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTCTGATTCTTGAAGGCTaGTGTAGCCGGGCAGAAAGA +
Preference number: 2 (lower is better)
Translates to: YKITLPRWLFSSISFSLSLILEG*CSRAER
Trigger: TCTTTCTGCCCGGCTACATCAGCCTTCAAGAATCAG...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR GCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTTCTTTGGAAGTGTCATaGATGTCCTCGGCACTGGGT +
Preference number: 2 (lower is better)
Translates to: YKITLPRWLFSSISFSLSSLEVS*MSSALG
Trigger: ACCCAGTGCCGAGGACATGCATGACACTTCCAAAGA...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTGATTTGGCCTGTGGCTaGGGAAATAACACACACGAG +
Preference number: 2 (lower is better)
Translates to: YKITLPRWLFSSISFSLSDLACG*GNNTHE
Trigger: CTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTGAAAGGGTGTCGCTATaGAGGGAGTCTTTGGAAGTG +
Preference number: 2 (lower is better)
Translates to: YKITLPRWLFSSISFSLSERVSL*RESLEV
Trigger: CACTTCCAAAGACTCCCTCCATAGCGACACCCTTTC...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR GCA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTCTCTTTGTAGGCTGTTaGTGCTTAAGGGAGGTTAGT +
Preference number: 2 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSLFVGC*CLREVS
Trigger: ACTAACCTCCCTTAAGCAGCAACAGCCTACAAAGAG...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR GCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTCACTCACTCTCCTTCTaGTTTTTGAGGAAAGCTGTC +
Preference number: 2 (lower is better)
Translates to: YKITLPRWLFSSISFSLSHSLSF*FLRKAV
Trigger: GACAGCTTTCCTCAAAAAGCAGAAGGAGAGTGAGTG...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTCAATTGCGTAGAAGGTaGAACGATCTTCCTATTCAA +
Preference number: 2 (lower is better)
Translates to: YKITLPRWLFSSISFSLSQLRRR*NDLPIQ
Trigger: TTGAATAGGAAGATCGTTCCACCTTCTACGCAATTG...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp GGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATaGAGCACCGAGAGGCCTGGGCAGCACCATCGCTGG +
Preference number: 3 (lower is better)
Translates to: GWASTWSVWRRR*STERPGQHHRW
Trigger: CCAGCGATGGTGCTGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp GGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTaGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCAG +
Preference number: 3 (lower is better)
Translates to: GAWTGWASTWSV*RRRWSTERPGQ
Trigger: CTGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp GTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTaGGCAGCACCATCGCTGGAGCTACCACAGTTGGGG +
Preference number: 3 (lower is better)
Translates to: VSVEAEMEHREA*AAPSLELPQLG
Trigger: CCCCAACTGTGGTAGCTCCAGCGATGGTGCTGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp CCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTaGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGG +
Preference number: 3 (lower is better)
Translates to: PDPGAWTGWAST*SVWRRRWSTER
Trigger: CCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp TCAGCAGCTCCGCCTGACCCTGGAGCATGGACTGGGTaGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGG +
Preference number: 3 (lower is better)
Translates to: SAAPPDPGAWTG*ASTWSVWRRRW
Trigger: CCATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCGGAGCTGCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp AGCTGTCACTCAGCAGCTCCGCCTGACCCTGGAGCATaGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGG +
Preference number: 3 (lower is better)
Translates to: SCHSAAPPDPGA*TGWASTWSVWR
Trigger: CCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCGGAGCTGCTGAGTGACAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR GCA 72 bp GCTGTTGGGCTGCCCATCCCTGGCAAGCTGTTCATGTaGCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAG +
Preference number: 3 (lower is better)
Translates to: AVGLPIPGKLFM*PLSSSCPQGSE
Trigger: CTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTGCCAGGGATGGGCAGCCCAACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR TCA 72 bp CACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTaGCAGAGACCATTCACGGACAGTTCATTCCGGCAG +
Preference number: 3 (lower is better)
Translates to: HTPSLGQGRRPA*QRPFTDSSFRQ
Trigger: CTGCCGGAATGAACTGTCCGTGAATGGTCTCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp CATGCATGTCCTCGGCACTGGGTAATGGCAGTGGTGTaGCTGCCCCTGGGACTCCAAGGATTTGGCCTGTGG +
Preference number: 3 (lower is better)
Translates to: HACPRHWVMAVV*LPLGLQGFGLW
Trigger: CCACAGGCCAAATCCTTGGAGTCCCAGGGGCAGCCACACCACTGCCATTACCCAGTGCCGAGGACATGCATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATTGGGACTCCAAGGATTaGGCCTGTGGCTGGGGAAAT +
Preference number: 3 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDWDSKD*ACGWGN
Trigger: ATTTCCCCAGCCACAGGCCAAATCCTTGGAGTCCCA...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR GCA 72 bp AGAGGAAGGAATTTGGCAGCAAACAGCTGGCTGGTTTaGTGCGCCGATGGCTGGCAGGTCCGTGGTGGTGGT +
Preference number: 3 (lower is better)
Translates to: RGRNLAANSWLV*CADGWQVRGGG
Trigger: ACCACCACCACGGACCTGCCAGCCATCGGCGCAGCAAACCAGCCAGCTGTTTGCTGCCAAATTCCTTCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR CCA 72 bp GGGAGTCTTTGGAAGTGTCATGCATGTCCTCGGCACTaGGTAATGGCAGTGGTGTGGCTGCCCCTGGGACTC +
Preference number: 3 (lower is better)
Translates to: GSLWKCHACPRH*VMAVVWLPLGL
Trigger: GAGTCCCAGGGGCAGCCACACCACTGCCATTACCCAGTGCCGAGGACATGCATGACACTTCCAAAGACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp GGTTTGCTGCGCCGATGGCTGGCAGGTCCGTGGTGGTaGTTTTCTATGCTACAGGTGGTGCAGTCTCTGGAG +
Preference number: 3 (lower is better)
Translates to: GLLRRWLAGPWW*FSMLQVVQSLE
Trigger: CTCCAGAGACTGCACCACCTGTAGCATAGAAAACCACCACCACGGACCTGCCAGCCATCGGCGCAGCAAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR CCA 72 bp GCTGGTTTGCTGCGCCGATGGCTGGCAGGTCCGTGGTaGTGGTTTTCTATGCTACAGGTGGTGCAGTCTCTG +
Preference number: 3 (lower is better)
Translates to: AGLLRRWLAGPW*WFSMLQVVQSL
Trigger: CAGAGACTGCACCACCTGTAGCATAGAAAACCACCACCACGGACCTGCCAGCCATCGGCGCAGCAAACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR CCA 72 bp CTGGCTGGTTTGCTGCGCCGATGGCTGGCAGGTCCGTaGTGGTGGTTTTCTATGCTACAGGTGGTGCAGTCT +
Preference number: 3 (lower is better)
Translates to: LAGLLRRWLAGP*WWFSMLQVVQS
Trigger: AGACTGCACCACCTGTAGCATAGAAAACCACCACCACGGACCTGCCAGCCATCGGCGCAGCAAACCAGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR-3UTR CAA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGTCTTCGTACCTAGGCTaGCTCATGGGCAGCACTGGC +
Preference number: 3 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGSSYLG*LMGSTG
Trigger: GCCAGTGCTGCCCATGAGCAAGCCTAGGTACGAAGA...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATGGGTGGGCCAGCACTaGGTCAGTGTGGAGGCGGAG +
Preference number: 3 (lower is better)
Translates to: SRTVHSGREVVLLISPAPWVGQH*VSVEAE
Trigger: CTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCA...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp AGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTaGGCCAAGGGAGACGGCCCGCTTGACAGAGACCAT +
Preference number: 3 (lower is better)
Translates to: RKELGITPTLRL*AKGDGPLDRDH
Trigger: ATGGTCTCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp GGCAGCGAGAGCCTGGGGCATGTGGCTGAAAGGAGTTaGAGCCGCTGGCTCTGTCCTTTCTCATTTTCTCTG +
Preference number: 3 (lower is better)
Translates to: GSESLGHVAERS*SRWLCPFSFSL
Trigger: CAGAGAAAATGAGAAAGGACAGAGCCAGCGGCTCCAACTCCTTTCAGCCACATGCCCCAGGCTCTCGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR GCA 72 bp CAGGTCCGTGGTGGTGGTTTTCTATGCTACAGGTGGTaGAGTCTCTGGAGGACAAGGATGGCAGAGAGAGGG +
Preference number: 3 (lower is better)
Translates to: QVRGGGFLCYRW*SLWRTRMAERG
Trigger: CCCTCTCTCTGCCATCCTTGTCCTCCAGAGACTGCACCACCTGTAGCATAGAAAACCACCACCACGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR CCA 72 bp ATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTaGCATTCACAGCCAGGACACTCCTGCCGTCCTTCT +
Preference number: 3 (lower is better)
Translates to: IHGTAQRGGEWL*HSQPGHSCRPS
Trigger: AGAAGGACGGCAGGAGTGTCCTGGCTGTGAATGCCAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp GTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATaGCTTTGGCATTCACAGCCAGGACACTCCTGCCGT +
Preference number: 3 (lower is better)
Translates to: VEIHGTAQRGGE*LWHSQPGHSCR
Trigger: ACGGCAGGAGTGTCCTGGCTGTGAATGCCAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR TCA 72 bp TCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCTaGCCGGAGCGACATGTACCTGTGATTCCCGTGTTA +
Preference number: 3 (lower is better)
Translates to: SCTGSRGQSQLI*PERHVPVIPVL
Trigger: TAACACGGGAATCACAGGTACATGTCGCTCCGGTCAGATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR GCA 72 bp AGGGTGTCGCTATGGAGGGAGTCTTTGGAAGTGTCATaGATGTCCTCGGCACTGGGTAATGGCAGTGGTGTG +
Preference number: 3 (lower is better)
Translates to: RVSLWRESLEVS*MSSALGNGSGV
Trigger: CACACCACTGCCATTACCCAGTGCCGAGGACATGCATGACACTTCCAAAGACTCCCTCCATAGCGACACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR GCA 72 bp GGAGAATGGCTTTGGCATTCACAGCCAGGACACTCCTaGCGTCCTTCTGACTGTGCAGATCTCAGGGTAGTG +
Preference number: 3 (lower is better)
Translates to: GEWLWHSQPGHS*RPSDCADLRVV
Trigger: CACTACCCTGAGATCTGCACAGTCAGAAGGACGGCAGGAGTGTCCTGGCTGTGAATGCCAAAGCCATTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp TACCCATTGTTGTGGGGGTCAAATAGTCAGCAGGACTaGATGTTGGTCCTCTCTGTTGAGTGGCCCTGCCCC +
Preference number: 3 (lower is better)
Translates to: YPLLWGSNSQQD*MLVLSVEWPCP
Trigger: GGGGCAGGGCCACTCAACAGAGAGGACCAACATCCAGTCCTGCTGACTATTTGACCCCCACAACAATGGGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp AGCCTGGGGCATGTGGCTGAAAGGAGTTGGAGCCGCTaGCTCTGTCCTTTCTCATTTTCTCTGACCCAAGAG +
Preference number: 3 (lower is better)
Translates to: SLGHVAERSWSR*LCPFSFSLTQE
Trigger: CTCTTGGGTCAGAGAAAATGAGAAAGGACAGAGCCAGCGGCTCCAACTCCTTTCAGCCACATGCCCCAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp CTAGAAGAGGAAAAGTGCTGTTGGGCTGCCCATCCCTaGCAAGCTGTTCATGTGCCCTCTGTCCTCATCCTG +
Preference number: 3 (lower is better)
Translates to: LEEEKCCWAAHP*QAVHVPSVLIL
Trigger: CAGGATGAGGACAGAGGGCACATGAACAGCTTGCCAGGGATGGGCAGCCCAACAGCACTTTTCCTCTTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp CTTCCAGCCACTGGGTTAGAGGGACCCGTATTCTGGTaGGATTTTAGGGGTACTGCTATGGACGGCTGCATC +
Preference number: 3 (lower is better)
Translates to: LPATGLEGPVFW*DFRGTAMDGCI
Trigger: GATGCAGCCGTCCATAGCAGTACCCCTAAAATCCCACCAGAATACGGGTCCCTCTAACCCAGTGGCTGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp GTTCTTCCAGCCACTGGGTTAGAGGGACCCGTATTCTaGTGGGATTTTAGGGGTACTGCTATGGACGGCTGC +
Preference number: 3 (lower is better)
Translates to: VLPATGLEGPVF*WDFRGTAMDGC
Trigger: GCAGCCGTCCATAGCAGTACCCCTAAAATCCCACCAGAATACGGGTCCCTCTAACCCAGTGGCTGGAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATACGCTCACCCGAGACTaGTCACTAGTGATGCTCAGT +
Preference number: 3 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDTLTRD*SLVMLS
Trigger: ACTGAGCATCACTAGTGACAAGTCTCGGGTGAGCGT...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR TCA 72 bp GTTGCTTTGGCTCCTGACAACACCACGGTGTGGTGCTaGTCTTGTATTTGGTCTGGACCTGGGAGAGGAAGG +
Preference number: 3 (lower is better)
Translates to: VALAPDNTTVWC*SCIWSGPGRGR
Trigger: CCTTCCTCTCCCAGGTCCAGACCAAATACAAGATCAGCACCACACCGTGGTGTTGTCAGGAGCCAAAGCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR-3UTR CAA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCCTATGGAGGGAGTCTTaGGAAGTGTCATGCATGTCC +
Preference number: 3 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLILWRES*EVSCMS
Trigger: GGACATGCATGACACTTCCAAAGACTCCCTCCATAG...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGAGGGAGACGGCCCGCTaGACAGAGACCATTCACGGA +
Preference number: 3 (lower is better)
Translates to: NDLPIQEDAKADVCRKELRETAR*TETIHG
Trigger: TCCGTGAATGGTCTCTGTCAAGCGGGCCGTCTCCCT...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp CGTCCTTCTGACTGTGCAGATCTCAGGGTAGTGTCCTaGTTTGGAATCCATCAGCCCTCTGATGCTCACAAG +
Preference number: 3 (lower is better)
Translates to: RPSDCADLRVVS*FGIHQPSDAHK
Trigger: CTTGTGAGCATCAGAGGGCTGATGGATTCCAAACCAGGACACTACCCTGAGATCTGCACAGTCAGAAGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp ACCCAACCAACCACCATAAGAAGCAGTGGAAATCCATaGCACTGCCCAAAGAGGGGGAGAATGGCTTTGGCA +
Preference number: 3 (lower is better)
Translates to: TQPTTIRSSGNP*HCPKRGRMALA
Trigger: TGCCAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTATGGTGGTTGGTTGGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp ACAAGGATGGCAGAGAGAGGGCAAAGCCAGTTTGCTTaGAAAGCCAATGTTGGAACTGGAGGCTTTCCCTGG +
Preference number: 3 (lower is better)
Translates to: TRMAERGQSQFA*KANVGTGGFPW
Trigger: CCAGGGAAAGCCTCCAGTTCCAACATTGGCTTTCCAAGCAAACTGGCTTTGCCCTCTCTCTGCCATCCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR-3UTR CAA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGTGGGACTCCAAGGATTaGGCCTGTGGCTGGGGAAAT +
Preference number: 3 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWWDSKD*ACGWGN
Trigger: ATTTCCCCAGCCACAGGCCAAATCCTTGGAGTCCCA...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACAGGGGGAGAATGGCTTaGGCATTCACAGCCAGGACA +
Preference number: 3 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHRGRMA*AFTART
Trigger: TGTCCTGGCTGTGAATGCCAAAGCCATTCTCCCCCT...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCAGGGAAGTAGTGTTGTaGATCTCACCAGCTCCATTC +
Preference number: 3 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLIREVVL*ISPAPF
Trigger: GAATGGAGCTGGTGAGATCAACAACACTACTTCCCT...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACGTCTGCAGAAAGGAGTaGGGAATCACTCCCACACTC +
Preference number: 3 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHVCRKE*GITPTL
Trigger: GAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGAC...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGAAGAGGAAAAGTGCTGTaGGGCTGCCCATCCCTGGCA +
Preference number: 3 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRRGKVL*GCPSLA
Trigger: TGCCAGGGATGGGCAGCCCAACAGCACTTTTCCTCT...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR TCA 72 bp TGGATGCTAACTAGGGAGGCGGGAAAAGAACAGAGATaGCCATGGGTCCAAACAGAAAGGGTGTCGCTATGG +
Preference number: 3 (lower is better)
Translates to: WMLTREAGKEQR*PWVQTERVSLW
Trigger: CCATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCTCCCTAGTTAGCATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR GCA 72 bp GATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTaGAGAAAGGAGTTGGGAATCACTCCCACACTCCGT +
Preference number: 3 (lower is better)
Translates to: DLPIQEDAKADV*RKELGITPTLR
Trigger: ACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp TCCAAACAGAAAGGGTGTCGCTATGGAGGGAGTCTTTaGAAGTGTCATGCATGTCCTCGGCACTGGGTAATG +
Preference number: 3 (lower is better)
Translates to: SKQKGCRYGGSL*KCHACPRHWVM
Trigger: CATTACCCAGTGCCGAGGACATGCATGACACTTCCAAAGACTCCCTCCATAGCGACACCCTTTCTGTTTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGAAGGGGGAGAATGGCTTaGGCATTCACAGCCAGGACA +
Preference number: 3 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRRGRMA*AFTART
Trigger: TGTCCTGGCTGTGAATGCCAAAGCCATTCTCCCCCT...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTGGCAGGGAAGTAGTGTaGTTGATCTCACCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSGREVV*LISPAP
Trigger: TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCC...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp TTTGGAAATGTTGACCCGCATCAAGAACACACCGATTaGTTTAGTTGCCACAACTGGGACAGGGAAGCCACG +
Preference number: 3 (lower is better)
Translates to: FGNVDPHQEHTD*FSCHNWDREAT
Trigger: CGTGGCTTCCCTGTCCCAGTTGTGGCAACTAAACCAATCGGTGTGTTCTTGATGCGGGTCAACATTTCCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTCTATGGAGGGAGTCTTaGGAAGTGTCATGCATGTCC +
Preference number: 3 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSLWRES*EVSCMS
Trigger: GGACATGCATGACACTTCCAAAGACTCCCTCCATAG...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACCATGTGATCAAGTTTTaGAGCCTCGTCACGGGAACT +
Preference number: 3 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHHVIKF*SLVTGT
Trigger: AGTTCCCGTGACGAGGCTCAAAAACTTGATCACATG...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGAGATCCTGGGAAGTGCTaGATGGCTACCACCAATGAG +
Preference number: 3 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRDPGKC*MATTNE
Trigger: CTCATTGGTGGTAGCCATCAAGCACTTCCCAGGATC...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACCCTAGCAATATTCTGTaGGAGCAGATCCTGGGAAGT +
Preference number: 3 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHPSNIL*EQILGS
Trigger: ACTTCCCAGGATCTGCTCCAACAGAATATTGCTAGG...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCCTGGGAGAGAGTTTTTaGAATGTCCCACTTAGAAAA +
Preference number: 3 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLILGESF*NVPLRK
Trigger: TTTTCTAAGTGGGACATTCAAAAAACTCTCTCCCAG...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCGTGCTGATCTTGTATTaGGTCTGGACCTGGGAGAGG +
Preference number: 3 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVVLILY*VWTWER
Trigger: CCTCTCCCAGGTCCAGACCAAATACAAGATCAGCAC...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR-3UTR CAA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCGGTGTGGTGCTGATCTaGTATTTGGTCTGGACCTGG +
Preference number: 3 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVGVVLI*YLVWTW
Trigger: CCAGGTCCAGACCAAATACAAGATCAGCACCACACC...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR TCA 72 bp ATTCCCGTGTTACCTGGTGGCATAAACCTTGGTGTCTaGCTTGGTAGCTGGGACAGTTCCAAGAAAAGTTGC +
Preference number: 3 (lower is better)
Translates to: IPVLPGGINLGV*LGSWDSSKKSC
Trigger: GCAACTTTTCTTGGAACTGTCCCAGCTACCAAGTCAGACACCAAGGTTTATGCCACCAGGTAACACGGGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCTTCCGGGTTTGTCAATaGCGTAGAAGGTGGAACGAT +
Preference number: 3 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVFRVCQ*RRRWND
Trigger: ATCGTTCCACCTTCTACGCAATTGACAAACCCGGAA...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR-3UTR CAA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGACTCCAAATGATCTCCTaGCTTTGGGATCCAAGTCAG +
Preference number: 3 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRLQMIS*LWDPSQ
Trigger: CTGACTTGGATCCCAAAGCAAGGAGATCATTTGGAG...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGCTGGGAGAGAGTTTTTaGAATGTCCCACTTAGAAAA +
Preference number: 3 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWLGESF*NVPLRK
Trigger: TTTTCTAAGTGGGACATTCAAAAAACTCTCTCCCAG...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR TCA 72 bp AGTATAGGGTTCTTCCCTGATGGGAGCAATTGCATCTaGTCTTCCGGGTTTGTCAATTGCGTAGAAGGTGGA +
Preference number: 3 (lower is better)
Translates to: SIGFFPDGSNCI*SSGFVNCVEGG
Trigger: TCCACCTTCTACGCAATTGACAAACCCGGAAGATCAGATGCAATTGCTCCCATCAGGGAAGAACCCTATACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp CATCTGATCTTCCGGGTTTGTCAATTGCGTAGAAGGTaGAACGATCTTCCTATTCAAGAGGATGCCAAGGCA +
Preference number: 3 (lower is better)
Translates to: HLIFRVCQLRRR*NDLPIQEDAKA
Trigger: TGCCTTGGCATCCTCTTGAATAGGAAGATCGTTCCACCTTCTACGCAATTGACAAACCCGGAAGATCAGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp CGCTGTTTTTCCAAGATCAGAAGGTCACTTAAATGCTaGGGTCCATCTAGAAGAGGAAAAGTGCTGTTGGGC +
Preference number: 3 (lower is better)
Translates to: RCFSKIRRSLKC*GPSRRGKVLLG
Trigger: GCCCAACAGCACTTTTCCTCTTCTAGATGGACCCCAGCATTTAAGTGACCTTCTGATCTTGGAAAAACAGCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR TCA 72 bp AGCAGATCCTGGGAAGTGCTTGATGGCTACCACCAATaGGTTGCTATAGATAAAGAAGGAAGACGCTGTTTT +
Preference number: 3 (lower is better)
Translates to: SRSWEVLDGYHQ*VAIDKEGRRCF
Trigger: AAAACAGCGTCTTCCTTCTTTATCTATAGCAACTCATTGGTGGTAGCCATCAAGCACTTCCCAGGATCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTCTAGGGAGATGGGGGTaGGTTCACAGTGATCAAACA +
Preference number: 3 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSLGRWG*VHSDQT
Trigger: TGTTTGATCACTGTGAACCAACCCCCATCTCCCTAG...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR GCA 72 bp TTCTGGTGGGATTTTAGGGGTACTGCTATGGACGGCTaGATCAGCAGACAATCTAAACTAGTCTCATTTAAA +
Preference number: 3 (lower is better)
Translates to: FWWDFRGTAMDG*ISRQSKLVSFK
Trigger: TTTAAATGAGACTAGTTTAGATTGTCTGCTGATGCAGCCGTCCATAGCAGTACCCCTAAAATCCCACCAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CCA 72 bp AACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATaGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTCTC +
Preference number: 3 (lower is better)
Translates to: NSLLRYKITLPR*LFSSISFSLSL
Trigger: GAGAGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR-3UTR CAA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTGCAGAGAATCTTAATTaGATCCATTACACTAGACTG +
Preference number: 3 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSAENLN*IHYTRL
Trigger: CAGTCTAGTGTAATGGATCAAATTAAGATTCTCTGC...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGAGGGGCGAGGCGGCACTaGCCTGCTGCCGTCACGGAC +
Preference number: 4 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRGARRH*PAAVTD
Trigger: GTCCGTGACGGCAGCAGGGCAGTGCCGCCTCGCCCC...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCCCCCGAGAGGCCTGCTaGAGCTGGGCTAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGPREAC*SWARLG
Trigger: CCCCAACCTAGCCCAGCTGCAGCAGGCCTCTCGGGG...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTCGGTCCCGGTGGCCTTaGAGGGTGTCAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: CPLSSSCPQGSESLGHVARSRWP*RVSAGR
Trigger: CCTCCCAGCTGACACCCTGCAAGGCCACCGGGACCG...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCAGCCGGCTCAGCACCTTaGGCAGTGGGTTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: GQHLVSVEAEMEHREAWAAGSAP*AVGWAP
Trigger: AGGTGCCCAACCCACTGCCCAAGGTGCTGAGCCGGC...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCACAGGTGGTGGCACCATaGGCAATGGCGTCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: GQHLVSVEAEMEHREAWAQVVAP*AMASLV
Trigger: GACCAGCGACGCCATTGCTCATGGTGCCACCACCTG...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCCAGCTGCATCCACCATaGCAGTGGCTCCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGQLHPP*QWLPSP
Trigger: TGGGCTGGGGAGCCACTGTCATGGTGGATGCAGCTG...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCACAGTCCAAGATGACCTaGATCAGCGGGGCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: GQHLVSVEAEMEHREAWAQSKMT*ISGARR
Trigger: CCGCCTCGCCCCGCTGATCCAGGTCATCTTGGACTG...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCAGAGCAATGGCGTCGCTaGTCAAGTGGGCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: GQHLVSVEAEMEHREAWAEQWRR*SSGPAG
Trigger: CCCTGCTGGCCCACTTGACCAGCGACGCCATTGCTC...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCCCTGACCCTGGAGCATaGACTGGGTGGGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGPDPGA*TGWAST
Trigger: AGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGG...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCTGGCACAATCAGGGCTaGCTGCAGCCTCGACTTCCC +
Preference number: 4 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGWHNQG*LQPRLP
Trigger: GGGAAGTCGAGGCTGCAGTCAGCCCTGATTGTGCCA...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGAGGCGGCACTGCCCTaGTGCCGTCACGGACACAGA +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDEAALP*CRHGHR
Trigger: TCTGTGTCCGTGACGGCAGCAGGGCAGTGCCGCCTC...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCACTGCTCGGCCAGATCTaGTTCCAGCTCGCTGACGTG +
Preference number: 4 (lower is better)
Translates to: GQHLVSVEAEMEHREAWALLGQI*FQLADV
Trigger: CACGTCAGCGAGCTGGAAGCAGATCTGGCCGAGCAG...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCCCTTGGGCAGTGGGTTaGGCACCTGCTTCATGGAGC +
Preference number: 4 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGPWAVG*APASWS
Trigger: GCTCCATGAAGCAGGTGCCCAACCCACTGCCCAAGG...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGAGGCCTGCTGCAGCTaGGCTAGGTTGGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDEACCS*ARLGLS
Trigger: GGACAGCCCCAACCTAGCCCAGCTGCAGCAGGCCTC...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTCCCTGGAGCATGGACTaGGTGGGCCAGCACTTGGTC +
Preference number: 4 (lower is better)
Translates to: CPLSSSCPQGSESLGHVAPWSMD*VGQHLV
Trigger: GACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGG...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGACCTGGGGCATGTGGCTaGAAGGAGTTGGAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRPGACG*KELEPL
Trigger: CAGCGGCTCCAACTCCTTTCAGCCACATGCCCCAGG...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCATGGCGGTCACTCATCTaGAGGTTGCCTGGGAACCTG +
Preference number: 4 (lower is better)
Translates to: GQHLVSVEAEMEHREAWAWRSLI*RLPGNL
Trigger: CAGGTTCCCAGGCAACCTGCAGATGAGTGACCGCCA...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGAACTCCCCGAGAGGCCTaGTGCAGCTGGGCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRTPREA*CSWARL
Trigger: CAACCTAGCCCAGCTGCAGCAGGCCTCTCGGGGAGT...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCCAGCCAGGACACTCCTaGCGTCCTTCTGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGQPGHS*RPSDCA
Trigger: TGCACAGTCAGAAGGACGGCAGGAGTGTCCTGGCTG...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCATGGGCACCTGCTTCATaGAGCTGGCCATCCGATCCA +
Preference number: 4 (lower is better)
Translates to: GQHLVSVEAEMEHREAWAWAPAS*SWPSDP
Trigger: TGGATCGGATGGCCAGCTCCATGAAGCAGGTGCCCA...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATCCAGCCTCGTCCAGCTaGCGGTCACTCATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDPASSS*RSLICR
Trigger: CCTGCAGATGAGTGACCGCCAGCTGGACGAGGCTGG...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCAGCGTCGCTGGTCAAGTaGGCCAGCAGGGTTATGGAA +
Preference number: 4 (lower is better)
Translates to: GQHLVSVEAEMEHREAWAASLVK*ASRVME
Trigger: TTCCATAACCCTGCTGGCCCACTTGACCAGCGACGC...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGCTCATGGGCAGCACTaGCCAGCCTGGATGCTAACT +
Preference number: 4 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGAHGQH*PAWMLT
Trigger: AGTTAGCATCCAGGCTGGCCAGTGCTGCCCATGAGC...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGGGCAGCACCATCGCTaGAGCTACCACAGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLGQHHR*SYHSWG
Trigger: CCCCCAACTGTGGTAGCTCCAGCGATGGTGCTGCCC...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCATCACCACCACAGGGCTaGTATGTTCTGACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GQHLVSVEAEMEHREAWASPPQG*YVLTGL
Trigger: CAGCCCTGTCAGAACATATCAGCCCTGTGGTGGTGA...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGAGCTGGCCCTGGTCACTaGTGCGCTCCAACGAATCCT +
Preference number: 4 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRAGPGH*CAPTNP
Trigger: AGGATTCGTTGGAGCGCATCAGTGACCAGGGCCAGC...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGATCCCCCAGCTCCTCCTaGTTGATGTCCAGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRSPSSS*LMSSPL
Trigger: CAGGGGACTGGACATCAAGCAGGAGGAGCTGGGGGA...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTTCCCCCAGCTCCTCCTaGTTGATGTCCAGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLSPSSS*LMSSPL
Trigger: CAGGGGACTGGACATCAAGCAGGAGGAGCTGGGGGA...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTTCACCCAGGCCGGAGTaGACTGGCACAATCAGGGCT +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLSPRPE*TGTIRA
Trigger: AGCCCTGATTGTGCCAGTGCACTCCGGCCTGGGTGA...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTCTGAGAACTAGCTCCTaGACAGGGTCGAGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: CPLSSSCPQGSESLGHVALRTSS*TGSRGQ
Trigger: TTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAG...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTTGGCACCATGAGCAATaGCGTCGCTGGTCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: CPLSSSCPQGSESLGHVAWHHEQ*RRWSSG
Trigger: CCCACTTGACCAGCGACGCCATTGCTCATGGTGCCA...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGTGGGCTAGGGAGATaGGGGTTGGTTCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGGGLGR*GLVHSD
Trigger: ATCACTGTGAACCAACCCCCATCTCCCTAGCCCACC...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTAGCCTCCCCAGTAGCTaGGATTATAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: CPLSSSCPQGSESLGHVASLPSS*DYRRLP
Trigger: TGGCAGGCGCCTATAATCCCAGCTACTGGGGAGGCT...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTCTGCCTTGCAGAACCTaGAGCTCCCGTTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLLPCRT*SSRWLV
Trigger: CACAAGCCAACGGGAGCTTCAGGTTCTGCAAGGCAG...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTAATTCCTCCTCCCTATaGGCTGCGCCACTCACCAGG +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLNSSSL*AAPLTR
Trigger: CCTGGTGAGTGGCGCAGCTCATAGGGAGGAGGAATT...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATAATTCCTCCTCCCTATaGGCTGCGCCACTCACCAGG +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDNSSSL*AAPLTR
Trigger: CCTGGTGAGTGGCGCAGCTCATAGGGAGGAGGAATT...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTCCTCTGGGGTTCAGGTaGTTCTCCTGTCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLPLGFR*FSCLSL
Trigger: GAGGCTGAGACAGGAGAATCACCTGAACCCCAGAGG...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTCTTCCAGCTGCAAGCTaGGAACTAGCTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: CPLSSSCPQGSESLGHVALPAAS*ELAPAQ
Trigger: CTGTGCAGGAGCTAGTTCTCAGCTTGCAGCTGGAAG...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCAGGTGGGTGCCCAGTATaGACGTTCTGGCGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: GQHLVSVEAEMEHREAWAGGCPV*TFWRVF
Trigger: AAAAACACGCCAGAACGTGCATACTGGGCACCCACC...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCAGACCAGAAGGTCTGTaGCCCTTTCTCATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGRPEGL*PFLMVG
Trigger: ACCCACCATGAGAAAGGGGCACAGACCTTCTGGTCT...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTTGCCGCAGGTGCTGCTaGTCGGCCAGATCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: QAVHVPSVLILSTGQREPCRRCC*SARSAS
Trigger: GGAAGCAGATCTGGCCGAGCAGCAGCACCTGCGGCA...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGTGCTGCCGCAGGTGCTaGTGCTCGGCCAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGCCRRC*CSARSA
Trigger: AGCAGATCTGGCCGAGCAGCAGCACCTGCGGCAGCA...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGAGGAGGTGATCTaGAGACCCAGCGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDGEEVI*RPSAAD
Trigger: ATCAGCTGCGCTGGGTCTGCAGATCACCTCCTCTCC...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGCCAAGGCAGACGTCTaGAGAAAGGAGTTGGGAATC +
Preference number: 4 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGAKADV*RKELGI
Trigger: GATTCCCAACTCCTTTCTGCAGACGTCTGCCTTGGC...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATCTGAGAACTAGCTCCTaGACAGGGTCGAGGGGCCAA +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDLRTSS*TGSRGQ
Trigger: TTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAG...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGCGTCGCTGGTCAAGTaGGCCAGCAGGGTTATGGAA +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLASLVK*ASRVME
Trigger: TTCCATAACCCTGCTGGCCCACTTGACCAGCGACGC...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGGACTCCAAGGATTTaGCCTGTGGCTGGGGAAATA +
Preference number: 4 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGGTPRI*PVAGEI
Trigger: TATTTCCCCAGCCACAGGCCAAATCCTTGGAGTCCC...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTCCTGACCCTGGAGCATaGACTGGGTGGGCCAGCACT +
Preference number: 4 (lower is better)
Translates to: QAVHVPSVLILSTGQREPPDPGA*TGWAST
Trigger: AGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGG...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCCCCACACTCCGTCTCTaGGCCAAGGGAGACGGCCCG +
Preference number: 4 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLIPTLRL*AKGDGP
Trigger: CGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGG...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTGGTGGGCTAGGGAGATaGGGGTTGGTTCACAGTGAT +
Preference number: 4 (lower is better)
Translates to: CPLSSSCPQGSESLGHVAGGLGR*GLVHSD
Trigger: ATCACTGTGAACCAACCCCCATCTCCCTAGCCCACC...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATAGCCTCCTGAGTAGCTaGGATTACGGGCACCCGTCA +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDSLLSS*DYGHPS
Trigger: TGACGGGTGCCCGTAATCCCAGCTACTCAGGAGGCT...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGCAATCATCCCGTCTTaGCCTCCCAAAGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGAIIPS*PPKVLG
Trigger: TCCCAGAACTTTGGGAGGCCAAGACGGGATGATTGC...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CAA 72 bp CCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTaGACAGAGACCATTCACGGACAGTTCATTCCGGCA +
Preference number: 4 (lower is better)
Translates to: PHSVSGPRETAR*TETIHGQFIPA
Trigger: TGCCGGAATGAACTGTCCGTGAATGGTCTCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCCTGATTCTTGAAGGCTaGTGTAGCCGGGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGLILEG*CSRAER
Trigger: TCTTTCTGCCCGGCTACATCAGCCTTCAAGAATCAG...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCAACCACGGTGTGGTGCTaGTCTTGTATTTGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: GQHLVSVEAEMEHREAWATTVWC*SCIWSG
Trigger: TCCAGACCAAATACAAGATCAGCACCACACCGTGGT...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR GCA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTCTTTCTCATGGTGGGTaGCCAGTATGCACGTTCTGG +
Preference number: 4 (lower is better)
Translates to: CPLSSSCPQGSESLGHVALSHGG*PVCTFW
Trigger: CCAGAACGTGCATACTGGGCACCCACCATGAGAAAG...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CCAAACAGAAAGGGTGTCGCTATGGAGGGAGTCTTTGGAAGTGTCATGCATGTCGGGGCGAGGCGGCACTaGCCTGCTGCCGTCACGGAC +
Preference number: 4 (lower is better)
Translates to: PNRKGVAMEGVFGSVMHVGARRH*PAAVTD
Trigger: GTCCGTGACGGCAGCAGGGCAGTGCCGCCTCGCCCC...GACATGCATGACACTTCCAAAGACTCCCTCCATAGCGACACCCTTTCTGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCAGGTGGTGGTTTTCTATaGTACAGGTGGTGCAGTCTC +
Preference number: 4 (lower is better)
Translates to: GQHLVSVEAEMEHREAWAGGGFL*YRWCSL
Trigger: GAGACTGCACCACCTGTAGCATAGAAAACCACCACC...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CCA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGATGTGCCCCTTTCTCATaGTGGGTGCCCAGTATGCAC +
Preference number: 4 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRCAPFS*WVPSMH
Trigger: GTGCATACTGGGCACCCACCATGAGAAAGGGGCACA...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGATTGCAGGGTGTCAGCTaGGAGGCAGGAGTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRLQGVS*EAGVEF
Trigger: AAACTCCACTCCTGCCTCCCAGCTGACACCCTGCAA...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGTGATTTGCCGGAAATaGTTGAGGCCACAACGCCGG +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDVICRK*LRPQRR
Trigger: CCGGCGTTGTGGCCTCAACCATTTCCGGCAAATCAC...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATCAGGGGTGTGCCCTTTaGGAGAGTTGGCTATGTGAG +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDQGCAL*ESWLCE
Trigger: CTCACATAGCCAACTCTCCCAAAGGGCACACCCCTG...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCAGAGGGACCCGTATTCTaGTGGGATTTTAGGGGTACT +
Preference number: 4 (lower is better)
Translates to: GQHLVSVEAEMEHREAWAEGPVF*WDFRGT
Trigger: AGTACCCCTAAAATCCCACCAGAATACGGGTCCCTC...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTCTGGCAGGTCCGTGGTaGTGGTTTTCTATGCTACAG +
Preference number: 4 (lower is better)
Translates to: CPLSSSCPQGSESLGHVALAGPW*WFSMLQ
Trigger: CTGTAGCATAGAAAACCACCACCACGGACCTGCCAG...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR TCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTTGCCCAGTTTGCTTCTaGCTGGGCAGAAGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLCPVCF*LGRSFQ
Trigger: CTGGAAACTTCTGCCCAGTCAGAAGCAAACTGGGCA...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCAGCTCTCCCAGTTTTTaGCGCTCCTTCTGCAATTCA +
Preference number: 4 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGSSPSF*RSFCNS
Trigger: TGAATTGCAGAAGGAGCGTCAAAAACTGGGAGAGCT...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTCTCCTGCCGTCCTTCTaGCTGTGCAGATCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: QAVHVPSVLILSTGQREPLLPSF*LCRSQG
Trigger: ACCCTGAGATCTGCACAGTCAGAAGGACGGCAGGAG...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATTGTCCCATCTTGTCATaGCCCATTTACGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDCPILS*PIYAHP
Trigger: CGGGTGAGCGTAAATGGGTCATGACAAGATGGGACA...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCAGCGGCACTGCCCTGCTaGCGTCACGGACACAGAGCG +
Preference number: 4 (lower is better)
Translates to: SRTVHSGREVVLLISPAPAALPC*RHGHRA
Trigger: CGCTCTGTGTCCGTGACGGCAGCAGGGCAGTGCCGC...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATCAGTCGTCGGCCGCCTaGTGCCGCAGGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYQSSAA*CRRCCC
Trigger: GCAGCAGCACCTGCGGCAGCAGGCGGCCGACGACTG...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGACTCCTGTGTCTCCTaGTCGGGATTTGCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDDSCVS*SGFAEH
Trigger: ATGCTCAGCAAATCCCGAGCAGGAGACACAGGAGTC...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR GCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATAGCTTTCACCTTGGATaGAGCCACAAGCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDSFHLG*SHKLGC
Trigger: ACAGCCCAGCTTGTGGCTGCATCCAAGGTGAAAGCT...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGCCAAGGCAGACGTCTaGAGAAAGGAGTTGGGAATC +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLAKADV*RKELGI
Trigger: GATTCCCAACTCCTTTCTGCAGACGTCTGCCTTGGC...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTGAAATCATGGCTCATTaGAGCCTCAAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: CPLSSSCPQGSESLGHVAEIMAH*SLKLLG
Trigger: GCCCAGGAGTTTGAGGCTGCAATGAGCCATGATTTC...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCAGGGCAAAGCCAGTTTaGTTGGAAAGCCAATGTTGG +
Preference number: 4 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGRAKPV*LESQCW
Trigger: CCAACATTGGCTTTCCAAGCAAACTGGCTTTGCCCT...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCCAGTCCAAGATGACCTaGATCAGCGGGGCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLIQSKMT*ISGARR
Trigger: CCGCCTCGCCCCGCTGATCCAGGTCATCTTGGACTG...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATTCAGGCAGTTCCTCATaGCTGTGCTGTCGGCATTCT +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDSGSSS*LCCRHS
Trigger: AGAATGCCGACAGCACAGCCATGAGGAACTGCCTGA...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTTGTTGGAGCAGATCCTaGGAAGTGCTTGATGGCTAC +
Preference number: 4 (lower is better)
Translates to: CPLSSSCPQGSESLGHVACWSRS*EVLDGY
Trigger: GTAGCCATCAAGCACTTCCCAGGATCTGCTCCAACA...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATTTAGGGGTACTGCTATaGACGGCTGCATCAGCAGAC +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDLGVLL*TAASAD
Trigger: GTCTGCTGATGCAGCCGTCCATAGCAGTACCCCTAA...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGGTTCTTCCAGCCACTaGGTTAGAGGGACCCGTATT +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLGSSSH*VRGTRI
Trigger: AATACGGGTCCCTCTAACCCAGTGGCTGGAAGAACC...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTAGCCAATGTTGGAACTaGAGGCTTTCCCTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLSQCWN*RLSLAG
Trigger: TCCTGCCAGGGAAAGCCTCCAGTTCCAACATTGGCT...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGCAGGTCCGTGGTGGTaGTTTTCTATGCTACAGGTG +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLAGPWW*FSMLQV
Trigger: CACCTGTAGCATAGAAAACCACCACCACGGACCTGC...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR TCA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTACAGAGGCAGGCGGTTaGCAACAGACCAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: QAVHVPSVLILSTGQREPTEAGG*QQTRRS
Trigger: AGACCTTCTGGTCTGTTGTCAACCGCCTGCCTCTGT...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTCTGTTTGGAAGAGGTTaGGTTCACACTCCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: CPLSSSCPQGSESLGHVALFGRG*VHTPGS
Trigger: ACTACCTGGAGTGTGAACTCAACCTCTTCCAAACAG...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCAACATGTCCAGGGAGTTaGATACTGTTTGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GQHLVSVEAEMEHREAWATCPGS*ILFGRG
Trigger: ACCTCTTCCAAACAGTATTCAACTCCCTGGACATGT...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGTCACCACCACAGGGCTaGTATGTTCTGACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGSPPQG*YVLTGL
Trigger: CAGCCCTGTCAGAACATATCAGCCCTGTGGTGGTGA...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTGTGCCTTCAATCCACTaGTCTCTCTGTATAGTCGCT +
Preference number: 4 (lower is better)
Translates to: CPLSSSCPQGSESLGHVAVPSIH*SLCIVA
Trigger: AGCGACTATACAGAGAGATCAGTGGATTGAAGGCAC...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGCCTCCCGCTGCCTCCTaGGCTCGTCCAGTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWPPAAS*ARPVLP
Trigger: GGGCAGAACTGGACGAGCTCAGGAGGCAGCGGGAGG...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTAGGTCAGCGTGGTTCTaGACCAGCTCGCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: QAVHVPSVLILSTGQREPRSAWF*TSSLYF
Trigger: GAAGTACAGCGAGCTGGTTCAGAACCACGCTGACCT...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATAGTTTCAATAGCAGCTaGAGTGGCCGCCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDSFNSS*SGRHLL
Trigger: AAGGAGATGGCGGCCACTTCAGCTGCTATTGAAACT...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCACTAGCAGCAATTTCATaGGAACACACCATTAGCTCC +
Preference number: 4 (lower is better)
Translates to: GQHLVSVEAEMEHREAWALAAIS*EHTISS
Trigger: GGAGCTAATGGTGTGTTCTCATGAAATTGCTGCTAG...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTTGTCAGCGTCATGCTTaGGAAGTCCATGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: CPLSSSCPQGSESLGHVACQRHA*EVHVVC
Trigger: ACAGACAACATGGACTTCTCAAGCATGACGCTGACA...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGATCTAGCACCCTAACCTaGGAATCCATCTCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRSSTLT*ESISWR
Trigger: ACGCCAAGAGATGGATTCTCAGGTTAGGGTGCTAGA...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGAACTGGGCTGTGTaGACCCTCTTGTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: QAVHVPSVLILSTGQREPGNWAV*TLLSLF
Trigger: AAAGAGGGACAAGAGGGTTCACACAGCCCAGTTCCC...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGACTGATTCTTGAAGGCTaGTGTAGCCGGGCAGAAAGA +
Preference number: 4 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRLILEG*CSRAER
Trigger: TCTTTCTGCCCGGCTACATCAGCCTTCAAGAATCAG...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTTGGAGGTCACACGTCTaGGTATGGTCATCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: QAVHVPSVLILSTGQREPWRSHV*VWSSEV
Trigger: GACCTCGGATGACCATACTCAGACGTGTGACCTCCA...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTCTTCCAGCAGAGCACTaGGTTGCTAGACAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: QAVHVPSVLILSTGQREPLPAEH*VARQRQ
Trigger: CTGCCTCTGTCTAGCAACGCAGTGCTCTGCTGGAAG...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGGCGGCACTGCCCTGCTaGCGTCACGGACACAGAGCG +
Preference number: 4 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALAALPC*RHGHRA
Trigger: CGCTCTGTGTCCGTGACGGCAGCAGGGCAGTGCCGC...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCAGTCGTCGGCCGCCTaGTGCCGCAGGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKQSSAA*CRRCCC
Trigger: GCAGCAGCACCTGCGGCAGCAGGCGGCCGACGACTG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATTCGGTTACCACTTCTTaGAGTGTAGGTGGAGATGCC +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDSVTTS*SVGGDA
Trigger: GGCATCTCCACCTACACTGCAAGAAGTGGTAACCGA...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGGCTCACTGCAACCTCTaGCTCTGGGGTTCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGAHCNL*LWGSGD
Trigger: ATCACCTGAACCCCAGAGGCAGAGGTTGCAGTGAGC...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGACAATCAGGGCTGACTaGAGCCTCGACTTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGTIRAD*SLDFPS
Trigger: GCTTGGGAAGTCGAGGCTGCAGTCAGCCCTGATTGT...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGTTGCCTGGGAACCTaGGATTTTTGGTGTGGTACT +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDGCLGT*DFWCGT
Trigger: AGTACCACACCAAAAATCCCAGGTTCCCAGGCAACC...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCTCGCAGGAAGTTGGGTaGGTTCTCAGGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLISQEVG*VLRQLG
Trigger: CCCCAGCTGCCTGAGAACCCACCCAACTTCCTGCGA...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATTGCAGCACAACCCGCTaGCTCTCAGTCTTCATGTTT +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDCSTTR*LSVFMF
Trigger: AAACATGAAGACTGAGAGCCAGCGGGTTGTGCTGCA...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATCCATGGACACCTGTTTaGTCACCTCTGCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDPWTPV*SPLHSS
Trigger: GGAAGAATGCAGAGGTGACCAAACAGGTGTCCATGG...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGCCACAACGCCGGCAGTaGCCTGGTTCACTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWPQRRQ*PGSLPE
Trigger: CTCGGGGAGTGAACCAGGCCACTGCCGGCGTTGTGG...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCTATGGAGGGAGTCTTTaGAAGTGTCATGCATGTCCT +
Preference number: 4 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGYGGSL*KCHACP
Trigger: AGGACATGCATGACACTTCCAAAGACTCCCTCCATA...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATGGAGCATGGACTGGGTaGGCCAGCACTTGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDGAWTG*ASTWSV
Trigger: CACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCC...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTAGGAGTTGGAGCCGCTaGCTCTGTCCTTTCTCATTT +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLRSWSR*LCPFSF
Trigger: AAATGAGAAAGGACAGAGCCAGCGGCTCCAACTCCT...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCAGGTCACTTAAATGCTaGGGTCCATCTAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGRSLKC*GPSRRG
Trigger: TCCTCTTCTAGATGGACCCCAGCATTTAAGTGACCT...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGGGATCACTGCTGAATaGACTGCCAAAGATGTCATC +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLGITAE*TAKDVI
Trigger: GATGACATCTTTGGCAGTTCATTCAGCAGTGATCCC...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCCTCCCGCTGCCTCCTaGGCTCGTCCAGTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKPPAAS*ARPVLP
Trigger: GGGCAGAACTGGACGAGCTCAGGAGGCAGCGGGAGG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATAATCCATCAGCCCTCTaGTGCTCACAAGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDNPSAL*CSQVCA
Trigger: TGCACAAACTTGTGAGCATCAGAGGGCTGATGGATT...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGATATAGGGTTCTTCCCTaGTGGGAGCAATTGCATCTG +
Preference number: 4 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRYRVLP*WEQLHL
Trigger: CAGATGCAATTGCTCCCATCAGGGAAGAACCCTATA...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGTCGATCCTAAGCCATaGTTTTGTTGCTGTCCCATC +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLVDPKP*FCCCPI
Trigger: GATGGGACAGCAACAAAATCATGGCTTAGGATCGAC...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCTGGCGGTCACTCATCTaGAGGTTGCCTGGGAACCTG +
Preference number: 4 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLIWRSLI*RLPGNL
Trigger: CAGGTTCCCAGGCAACCTGCAGATGAGTGACCGCCA...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAGGGGCGAGGCGGCACTaGCCTGCTGCCGTCACGGAC +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLGARRH*PAAVTD
Trigger: GTCCGTGACGGCAGCAGGGCAGTGCCGCCTCGCCCC...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCGGTCCCGGTGGCCTTaGAGGGTGTCAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKRSRWP*RVSAGR
Trigger: CCTCCCAGCTGACACCCTGCAAGGCCACCGGGACCG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGACGTGGCCCTTCAGCTaGAGCACAACCCGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWTWPFS*STTRWL
Trigger: GAGCCAGCGGGTTGTGCTGCAGCTGAAGGGCCACGT...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACCAGTCGTCGGCCGCCTaGTGCCGCAGGTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHQSSAA*CRRCCC
Trigger: GCAGCAGCACCTGCGGCAGCAGGCGGCCGACGACTG...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGTTTCCCTGCCATACTaGTTACAGGCCTCGGTCAGT +
Preference number: 4 (lower is better)
Translates to: QAVHVPSVLILSTGQREPVSLPY*LQASVS
Trigger: ACTGACCGAGGCCTGTAAGCAGTATGGCAGGGAAAC...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAAACTCTTTAGGGGATaGTGTACCCCTGCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGKLFRG*CTPAAL
Trigger: GAGAGCGGCAGGGGTACAGCATCCCCTAAAGAGTTT...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR GCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCCCCGAGAGGCCTGCTaGAGCTGGGCTAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKPREAC*SWARLG
Trigger: CCCCAACCTAGCCCAGCTGCAGCAGGCCTCTCGGGG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTTCACTCAGGCTGGAGTaGAGTGGGAAATCATGGCTC +
Preference number: 4 (lower is better)
Translates to: QAVHVPSVLILSTGQREPSLRLE*SGKSWL
Trigger: GAGCCATGATTTCCCACTGCACTCCAGCCTGAGTGA...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGACGCCGGCAGTGGCCTaGTTCACTCCCCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: PISSADTSLAQYGGHTSETPAVA*FTPREA
Trigger: GGCCTCTCGGGGAGTGAACCAGGCCACTGCCGGCGT...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGACGCCGGCAGTGGCCTaGTTCACTCCCCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: NDLPIQEDAKADVCRKELTPAVA*FTPREA
Trigger: GGCCTCTCGGGGAGTGAACCAGGCCACTGCCGGCGT...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTTTCTTGCAGTGTAGGTaGAGATGCCTCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLFLQCR*RCLCSF
Trigger: GAAGGAACAGAGGCATCTCCACCTACACTGCAAGAA...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGATGCAGTGGGAAATCATaGCTCATTGCAGCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRCSGKS*LIAASN
Trigger: GTTTGAGGCTGCAATGAGCCATGATTTCCCACTGCA...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGATTCCCGTGTTACCTaGTGGCATAAACCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDDSRVT*WHKPWC
Trigger: ACACCAAGGTTTATGCCACCAGGTAACACGGGAATC...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGCTGCGCCGATGGCTaGCAGGTCCGTGGTGGTGGT +
Preference number: 4 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHCCADG*QVRGGG
Trigger: ACCACCACCACGGACCTGCCAGCCATCGGCGCAGCA...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGGGTTTGCTGCGCCGATaGCTGGCAGGTCCGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWGLLRR*LAGPWW
Trigger: CCACCACGGACCTGCCAGCCATCGGCGCAGCAAACC...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR CAA 72 bp AATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTaGGCATTCACAGCCAGGACACTCCTGCCGTCCTTC +
Preference number: 4 (lower is better)
Translates to: NPWHCPKRGRMA*AFTARTLLPSF
Trigger: GAAGGACGGCAGGAGTGTCCTGGCTGTGAATGCCAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CAA 72 bp CAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTaGGGAATCACTCCCACACTCCGTCTCTGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QEDAKADVCRKE*GITPTLRLWAK
Trigger: CTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGAACATGTCCAGGGAGTTaGATACTGTTTGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRTCPGS*ILFGRG
Trigger: ACCTCTTCCAAACAGTATTCAACTCCCTGGACATGT...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCTCGCTGTCGGGGGATaGGGCCTCTGCAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKLAVGG*GLCRDH
Trigger: GTGATCCCTGCAGAGGCCTCATCCCCCGACAGCGAG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACCTGCTTCCAGCTCGCTaGCGTGGCCCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHLLPAR*RGPSAA
Trigger: TGCAGCTGAAGGGCCACGTCAGCGAGCTGGAAGCAG...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGTCAGACAGGCTCCGCTaGGCCTTCTCGGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWSDRLR*AFSVSS
Trigger: GGAGGACACCGAGAAGGCTCAGCGGAGCCTGTCTGA...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATCGCTGTTCATTGGCTTaGGCTTTCCTTTCTATCTCA +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDRCSLA*AFLSIS
Trigger: TGAGATAGAAAGGAAAGCTCAAGCCAATGAACAGCG...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGTTTCAATAGCAGCTaGAGTGGCCGCCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGSFNSS*SGRHLL
Trigger: AAGGAGATGGCGGCCACTTCAGCTGCTATTGAAACT...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATCAGCTGCATCCACCATaGCAGTGGCTCCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYQLHPP*QWLPSP
Trigger: TGGGCTGGGGAGCCACTGTCATGGTGGATGCAGCTG...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCTGGAGGTCACACGTCTaGGTATGGTCATCCGAGGTC +
Preference number: 4 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLIWRSHV*VWSSEV
Trigger: GACCTCGGATGACCATACTCAGACGTGTGACCTCCA...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACGCGGCACTGCCCTGCTaGCGTCACGGACACAGAGCG +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHAALPC*RHGHRA
Trigger: CGCTCTGTGTCCGTGACGGCAGCAGGGCAGTGCCGC...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCGGTCCCGGTGGCCTTaGAGGGTGTCAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDRSRWP*RVSAGR
Trigger: CCTCCCAGCTGACACCCTGCAAGGCCACCGGGACCG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATTGCTGCCGCAGGTGCTaGTGCTCGGCCAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYCCRRC*CSARSA
Trigger: AGCAGATCTGGCCGAGCAGCAGCACCTGCGGCAGCA...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTCTTGTGGCAAGTTCCTaGTTCAAGCTCTCTAGAACT +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLLVASS*FKLSRT
Trigger: AGTTCTAGAGAGCTTGAAGCAGGAACTTGCCACAAG...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCCCCGAGAGGCCTGCTaGAGCTGGGCTAGGTTGGGG +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDPREAC*SWARLG
Trigger: CCCCAACCTAGCCCAGCTGCAGCAGGCCTCTCGGGG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCTTTGTAGGCTGTTGCTaGTTAAGGGAGGTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGFVGCC*LREVSN
Trigger: ATTACTAACCTCCCTTAAGCAGCAACAGCCTACAAA...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGGTCCCACTTAGAAAATaGACAGAGAGGGAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGVPLRK*TERELG
Trigger: CCCCAACTCCCTCTCTGTGCATTTTCTAAGTGGGAC...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATCACCCAGGCCGGAGTaGACTGGCACAATCAGGGCT +
Preference number: 4 (lower is better)
Translates to: SRTVHSGREVVLLISPAPSPRPE*TGTIRA
Trigger: AGCCCTGATTGTGCCAGTGCACTCCGGCCTGGGTGA...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATAGCTGGCTGGTTTGCTaGGCCGATGGCTGGCAGGTC +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYSWLVC*ADGWQV
Trigger: GACCTGCCAGCCATCGGCGCAGCAAACCAGCCAGCT...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR GCA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTACCCAACCCTATCCCTaGAAACTGAAATGTGAAAGA +
Preference number: 4 (lower is better)
Translates to: CPLSSSCPQGSESLGHVATQPYP*KLKCER
Trigger: TCTTTCACATTTCAGTTTGCAGGGATAGGGTTGGGT...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATCCAGTATGCACGTTCTaGCGTGTTTTTCCTTTACAG +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDPVCTF*RVFPLQ
Trigger: CTGTAAAGGAAAAACACGCCAGAACGTGCATACTGG...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCGCCCCTTTCTCATGGTaGGTGCCCAGTATGCACGTT +
Preference number: 4 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLIAPFSW*VPSMHV
Trigger: AACGTGCATACTGGGCACCCACCATGAGAAAGGGGC...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATACCCCTCGCTCAGGTaGCCCCACATCCTGCTCATG +
Preference number: 4 (lower is better)
Translates to: SRTVHSGREVVLLISPAPYPSLR*PHILLM
Trigger: CATGAGCAGGATGTGGGGCCACCTGAGCGAGGGGTA...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGCCAGCCTCGTCCAGCTaGCGGTCACTCATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWPASSS*RSLICR
Trigger: CCTGCAGATGAGTGACCGCCAGCTGGACGAGGCTGG...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCAGAGTTGAATACTGTTTaGAAGAGGTTGAGTTCACAC +
Preference number: 4 (lower is better)
Translates to: GQHLVSVEAEMEHREAWAELNTV*KRLSSH
Trigger: GTGTGAACTCAACCTCTTCCAAACAGTATTCAACTC...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATCCAGCTCGCTGACGTaGCCCTTCAGCTGCAGCACA +
Preference number: 4 (lower is better)
Translates to: SRTVHSGREVVLLISPAPSSSLT*PFSCST
Trigger: TGTGCTGCAGCTGAAGGGCCACGTCAGCGAGCTGGA...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCGGGCTTGTCTGGCCATaGACACCTGTTTGGTCACCT +
Preference number: 4 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLIGLVWP*TPVWSP
Trigger: AGGTGACCAAACAGGTGTCCATGGCCAGACAAGCCC...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCAGTCTTCCGCTGGCCCTaGTCACTGATGCGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: SRTVHSGREVVLLISPAPVFRWP*SLMRSN
Trigger: GTTGGAGCGCATCAGTGACCAGGGCCAGCGGAAGAC...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATAGAAGCATTTTTCGTTaGTCTTTGGCAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDRSIFR*SLASWH
Trigger: GTGCCAGCTTGCCAAAGACCAACGAAAAATGCTTCT...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGGAGCAATGGCGTCGCTaGTCAAGTGGGCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALEQWRR*SSGPAG
Trigger: CCCTGCTGGCCCACTTGACCAGCGACGCCATTGCTC...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATACGCCGGCAGTGGCCTaGTTCACTCCCCGAGAGGCC +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDTPAVA*FTPREA
Trigger: GGCCTCTCGGGGAGTGAACCAGGCCACTGCCGGCGT...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCAATTTACACTGACATATaGGGTGTTGGTTTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: GQHLVSVEAEMEHREAWAIYTDI*GVGLAL
Trigger: TAGAGCCAAACCAACACCCCATATGTCAGTGTAAAT...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGTGGTGTGGCTGCCCCTaGGACTCCAAGGATTTGGCC +
Preference number: 4 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWWCGCP*DSKDLA
Trigger: GGCCAAATCCTTGGAGTCCCAGGGGCAGCCACACCA...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGAAATAGTCAGCAGGACTaGATGTTGGTCCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRNSQQD*MLVLSV
Trigger: AACAGAGAGGACCAACATCCAGTCCTGCTGACTATT...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACCCCACACTCCGTCTCTaGGCCAAGGGAGACGGCCCG +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHPTLRL*AKGDGP
Trigger: CGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGG...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGTCTGCAGAAAGGAGTTaGGAATCACTCCCACACTCC +
Preference number: 4 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGSAERS*ESLPHS
Trigger: GGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGA...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCTCGCTGTCGGGGGATaGGGCCTCTGCAGGGATCAC +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDLAVGG*GLCRDH
Trigger: GTGATCCCTGCAGAGGCCTCATCCCCCGACAGCGAG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTTCAAATAAATTCTGCTaGGAGGCATCCATGTCCATG +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLSNKFC*EASMSM
Trigger: CATGGACATGGATGCCTCTCAGCAGAATTTATTTGA...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCTGCTTCCAGCTCGCTaGCGTGGCCCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKLLPAR*RGPSAA
Trigger: TGCAGCTGAAGGGCCACGTCAGCGAGCTGGAAGCAG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGTCAGACAGGCTCCGCTaGGCCTTCTCGGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: NDLPIQEDAKADVCRKELSDRLR*AFSVSS
Trigger: GGAGGACACCGAGAAGGCTCAGCGGAGCCTGTCTGA...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCAGGTGGTGGCACCATaGGCAATGGCGTCGCTGGTC +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKQVVAP*AMASLV
Trigger: GACCAGCGACGCCATTGCTCATGGTGCCACCACCTG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGCCTCGCCGATGGCCTTaGTCTTGCTCAGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWPRRWP*SCSGSS
Trigger: GGAACTGCCTGAGCAAGATCAAGGCCATCGGCGAGG...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATCCTGTCTCAGCCTCCTaGGTAGCTGGGATTACGGGC +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYPVSAS*VAGITG
Trigger: GCCCGTAATCCCAGCTACTCAGGAGGCTGAGACAGG...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp CCAAACAGAAAGGGTGTCGCTATGGAGGGAGTCTTTGGAAGTGTCATGCATGTCCCTGTCTCAGCCTCCTaGGTAGCTGGGATTACGGGC +
Preference number: 4 (lower is better)
Translates to: PNRKGVAMEGVFGSVMHVPVSAS*VAGITG
Trigger: GCCCGTAATCCCAGCTACTCAGGAGGCTGAGACAGG...GACATGCATGACACTTCCAAAGACTCCCTCCATAGCGACACCCTTTCTGTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGAGAGGCGGCACTGCCCTaGTGCCGTCACGGACACAGA +
Preference number: 4 (lower is better)
Translates to: TVPRKVALDSGSSSHWVREAALP*CRHGHR
Trigger: TCTGTGTCCGTGACGGCAGCAGGGCAGTGCCGCCTC...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACGAGGCGGCACTGCCCTaGTGCCGTCACGGACACAGA +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHEAALP*CRHGHR
Trigger: TCTGTGTCCGTGACGGCAGCAGGGCAGTGCCGCCTC...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGACGTGGCCCTTCAGCTaGAGCACAACCCGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKTWPFS*STTRWL
Trigger: GAGCCAGCGGGTTGTGCTGCAGCTGAAGGGCCACGT...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGCTGCTCGGCCAGATCTaGTTCCAGCTCGCTGACGTG +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWLLGQI*FQLADV
Trigger: CACGTCAGCGAGCTGGAAGCAGATCTGGCCGAGCAG...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGAGCCTGCTGCCGCAGGTaGTGCTGCTCGGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRACCRR*CCSARS
Trigger: AGATCTGGCCGAGCAGCAGCACCTGCGGCAGCAGGC...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACGCCTGCTGCCGCAGGTaGTGCTGCTCGGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHACCRR*CCSARS
Trigger: AGATCTGGCCGAGCAGCAGCACCTGCGGCAGCAGGC...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGTCGGTGTCCTCCCGCTaGCTCCTGAGCTCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKSVSSR*LLSSSS
Trigger: ACTGGACGAGCTCAGGAGGCAGCGGGAGGACACCGA...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGCTCCTCCCTATGAGCTaGGCCACTCACCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWLLPMS*ATHQAV
Trigger: GACAGCCTGGTGAGTGGCGCAGCTCATAGGGAGGAG...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGCTCCTCCCTATGAGCTaGGCCACTCACCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALLLPMS*ATHQAV
Trigger: GACAGCCTGGTGAGTGGCGCAGCTCATAGGGAGGAG...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCTACCACCAGATCAGCTaGATCCACCATGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLIYHQIS*IHHDSG
Trigger: GCCACTGTCATGGTGGATGCAGCTGATCTGGTGGTA...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATAGCTTTCACCTTGGATaGAGCCACAAGCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDSFHLG*SHKLGC
Trigger: ACAGCCCAGCTTGTGGCTGCATCCAAGGTGAAAGCT...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGACTCCCCGAGAGGCCTaGTGCAGCTGGGCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKTPREA*CSWARL
Trigger: CAACCTAGCCCAGCTGCAGCAGGCCTCTCGGGGAGT...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGTCAGCCCCAGGGGTGTaGCCTTTGGGAGAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWSAPGV*PLGELA
Trigger: AGCCAACTCTCCCAAAGGGCACACCCCTGGGGCTGA...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGACCGATTGGTTTAGTTaGCACAACTGGGACAGGGAA +
Preference number: 4 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGTDWFS*HNWDRE
Trigger: TTCCCTGTCCCAGTTGTGGCAACTAAACCAATCGGT...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACAACAGCTGGCTGGTTTaGTGCGCCGATGGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHNSWLV*CADGWQ
Trigger: CTGCCAGCCATCGGCGCAGCAAACCAGCCAGCTGTT...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CCA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCGCCGGCTCAGCACCTTaGGCAGTGGGTTGGGCACCT +
Preference number: 4 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVAGSAP*AVGWAP
Trigger: AGGTGCCCAACCCACTGCCCAAGGTGCTGAGCCGGC...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTTGTGGTACTCCATCTTaGTTCTTAGCAGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLCGTPS*FLAVSG
Trigger: ACCTGAAACTGCTAAGAACCAAGATGGAGTACCACA...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGTCGCAGGAAGTTGGGTaGGTTCTCAGGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWSQEVG*VLRQLG
Trigger: CCCCAGCTGCCTGAGAACCCACCCAACTTCCTGCGA...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCCGTTCCAAATCTACCTaGGCTTGTCTGGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLIRSKST*ACLAMD
Trigger: GTCCATGGCCAGACAAGCCCAGGTAGATTTGGAACG...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATGAGGCCTGCTGCAGCTaGGCTAGGTTGGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDEACCS*ARLGLS
Trigger: GGACAGCCCCAACCTAGCCCAGCTGCAGCAGGCCTC...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACGAGGCCTGCTGCAGCTaGGCTAGGTTGGGGCTGTCC +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHEACCS*ARLGLS
Trigger: GGACAGCCCCAACCTAGCCCAGCTGCAGCAGGCCTC...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCCACAACGCCGGCAGTaGCCTGGTTCACTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDPQRRQ*PGSLPE
Trigger: CTCGGGGAGTGAACCAGGCCACTGCCGGCGTTGTGG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGATACCCATTGTTGTaGGGGTCAAATAGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: QAVHVPSVLILSTGQREPGYPLL*GSNSQQ
Trigger: CTGCTGACTATTTGACCCCCACAACAATGGGTATCC...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATCTCAGGGTAGTGTCCTaGTTTGGAATCCATCAGCCC +
Preference number: 4 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDLRVVS*FGIHQP
Trigger: GGGCTGATGGATTCCAAACCAGGACACTACCCTGAG...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATGAGCACCGAGAGGCCTaGGCAGCACCATCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDEHREA*AAPSLE
Trigger: CTCCAGCGATGGTGCTGCCCAGGCCTCTCGGTGCTC...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGGGTGGGCCAGCACTTaGTCAGTGTGGAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKGWAST*SVWRRR
Trigger: TCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGTGCAGTGGGAAATCATaGCTCATTGCAGCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGCSGKS*LIAASN
Trigger: GTTTGAGGCTGCAATGAGCCATGATTTCCCACTGCA...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATTGGCTGGCAGGTCCGTaGTGGTGGTTTTCTATGCTA +
Preference number: 4 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDWLAGP*WWFSML
Trigger: TAGCATAGAAAACCACCACCACGGACCTGCCAGCCA...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR TCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCAGGCATCCATGTCCATaGGGTCATCCTTCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLIRHPCP*GHPSLG
Trigger: TCCTAGAGAAGGATGACCTCATGGACATGGATGCCT...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGCTGGCCCTGGTCACTaGTGCGCTCCAACGAATCCT +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKAGPGH*CAPTNP
Trigger: AGGATTCGTTGGAGCGCATCAGTGACCAGGGCCAGC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCCTCGCCGATGGCCTTaGTCTTGCTCAGGCAGTTCC +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKPRRWP*SCSGSS
Trigger: GGAACTGCCTGAGCAAGATCAAGGCCATCGGCGAGG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACCAGCTGCATCCACCATaGCAGTGGCTCCCCAGCCCA +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHQLHPP*QWLPSP
Trigger: TGGGCTGGGGAGCCACTGTCATGGTGGATGCAGCTG...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGTTTGCCGGAAATGGTTaGGGCCACAACGCCGGCAGT +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWFAGNG*GHNAGS
Trigger: ACTGCCGGCGTTGTGGCCTCAACCATTTCCGGCAAA...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGAAACAAGGATTTACACTaGCATATGGGGTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRNKDLH*HMGCWF
Trigger: AAACCAACACCCCATATGTCAGTGTAAATCCTTGTT...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATGGGAGACGGCCCGCTTaGCAGAGACCATTCACGGAC +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDGRRPA*QRPFTD
Trigger: GTCCGTGAATGGTCTCTGTCAAGCGGGCCGTCTCCC...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCCTGGGGCATGTGGCTaGAAGGAGTTGGAGCCGCTG +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDPGACG*KELEPL
Trigger: CAGCGGCTCCAACTCCTTTCAGCCACATGCCCCAGG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCATCCTGGGAAGTGCTTaGTGGCTACCACCAATGAGT +
Preference number: 4 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLIILGSA*WLPPMS
Trigger: ACTCATTGGTGGTAGCCATCAAGCACTTCCCAGGAT...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTTTTACAGCCACTTCCTaGGTATTAATGGCCTTATTG +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLFTATS*VLMALL
Trigger: CAATAAGGCCATTAATACGCAGGAAGTGGCTGTAAA...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCGGTGGCCCCACATCCTaGTCATGTCACTCAATTCAT +
Preference number: 4 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLIGGPTS*SCHSIH
Trigger: ATGAATTGAGTGACATGAGCAGGATGTGGGGCCACC...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATCACTCATCTGCAGGTTaGCTGGGAACCTGGGATTTT +
Preference number: 4 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDHSSAG*LGTWDF
Trigger: AAAATCCCAGGTTCCCAGGCAACCTGCAGATGAGTG...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATACGTGGCCCTTCAGCTaGAGCACAACCCGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDTWPFS*STTRWL
Trigger: GAGCCAGCGGGTTGTGCTGCAGCTGAAGGGCCACGT...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACTGCCGCAGGTGCTGCTaGTCGGCCAGATCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHCRRCC*SARSAS
Trigger: GGAAGCAGATCTGGCCGAGCAGCAGCACCTGCGGCA...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGATCGGTGTCCTCCCGCTaGCTCCTGAGCTCGTCCAGT +
Preference number: 4 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRSVSSR*LLSSSS
Trigger: ACTGGACGAGCTCAGGAGGCAGCGGGAGGACACCGA...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGCTTGTGGCAAGTTCCTaGTTCAAGCTCTCTAGAACT +
Preference number: 4 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGLVASS*FKLSRT
Trigger: AGTTCTAGAGAGCTTGAAGCAGGAACTTGCCACAAG...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATGGGATGCTGTACCCCTaGCGCTCTCCACAATCTCTC +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYGMLYP*RSPQSL
Trigger: GAGAGATTGTGGAGAGCGGCAGGGGTACAGCATCCC...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR GCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATCAGTGTAGGTGGAGATaGCTCTGTTCCTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDQCRWR*LCSFFP
Trigger: TGGGAAGAAGGAACAGAGGCATCTCCACCTACACTG...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCCAGTGTAGGTGGAGATaGCTCTGTTCCTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLIQCRWR*LCSFFP
Trigger: TGGGAAGAAGGAACAGAGGCATCTCCACCTACACTG...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGTGGCAGTGGTGTGGCTaGCCCTGGGACTCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: PISSADTSLAQYGGHTSEWQWCG*PWDSKD
Trigger: ATCCTTGGAGTCCCAGGGGCAGCCACACCACTGCCA...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGTGGCAGTGGTGTGGCTaGCCCTGGGACTCCAAGGAT +
Preference number: 4 (lower is better)
Translates to: NDLPIQEDAKADVCRKELWQWCG*PWDSKD
Trigger: ATCCTTGGAGTCCCAGGGGCAGCCACACCACTGCCA...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGCACTCACTCTCCTTCTaGTTTTTGAGGAAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGHSLSF*FLRKAV
Trigger: GACAGCTTTCCTCAAAAAGCAGAAGGAGAGTGAGTG...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGCTCACTGCAACCTCTaGCTCTGGGGTTCAGGTGAT +
Preference number: 4 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWAHCNL*LWGSGD
Trigger: ATCACCTGAACCCCAGAGGCAGAGGTTGCAGTGAGC...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGAAGTTCCAAGAAAAGTTaGTCTAGACAGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRSSKKS*SRQWFF
Trigger: GAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACT...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGCCTGCTTCATGGAGCTaGCCATCCGATCCATGTCGC +
Preference number: 4 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALPASWS*PSDPCR
Trigger: GCGACATGGATCGGATGGCCAGCTCCATGAAGCAGG...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CCAAACAGAAAGGGTGTCGCTATGGAGGGAGTCTTTGGAAGTGTCATGCATGTCCCTGCTTCATGGAGCTaGCCATCCGATCCATGTCGC +
Preference number: 4 (lower is better)
Translates to: PNRKGVAMEGVFGSVMHVPASWS*PSDPCR
Trigger: GCGACATGGATCGGATGGCCAGCTCCATGAAGCAGG...GACATGCATGACACTTCCAAAGACTCCCTCCATAGCGACACCCTTTCTGTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACCAGCACCTTGGGCAGTaGGTTGGGCACCTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHQHLGQ*VGHLLH
Trigger: ATGAAGCAGGTGCCCAACCCACTGCCCAAGGTGCTG...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACCCAGCCTCGTCCAGCTaGCGGTCACTCATCTGCAGG +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHPASSS*RSLICR
Trigger: CCTGCAGATGAGTGACCGCCAGCTGGACGAGGCTGG...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACAGGCTCGCAGGAAGTTaGGTGGGTTCTCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHRLAGS*VGSQAA
Trigger: AGCTGCCTGAGAACCCACCCAACTTCCTGCGAGCCT...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGAGGCTCGCAGGAAGTTaGGTGGGTTCTCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALRLAGS*VGSQAA
Trigger: AGCTGCCTGAGAACCCACCCAACTTCCTGCGAGCCT...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCAGGGCTTGTCTGGCCATaGACACCTGTTTGGTCACCT +
Preference number: 4 (lower is better)
Translates to: SRTVHSGREVVLLISPAPGLVWP*TPVWSP
Trigger: AGGTGACCAAACAGGTGTCCATGGCCAGACAAGCCC...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCACTACCTGGGCTTGTCTaGCCATGGACACCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: SRTVHSGREVVLLISPAPLPGLV*PWTPVW
Trigger: CCAAACAGGTGTCCATGGCCAGACAAGCCCAGGTAG...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGGCTCCGCAGCCTTCCTaGACCCCACCAGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWAPQPS*TPPEAF
Trigger: AAATGCTTCTGGTGGGGTCCAGGAAGGCTGCGGAGC...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATGAGCAATGGCGTCGCTaGTCAAGTGGGCCAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDEQWRR*SSGPAG
Trigger: CCCTGCTGGCCCACTTGACCAGCGACGCCATTGCTC...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACCACAACGCCGGCAGTaGCCTGGTTCACTCCCCGAG +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLPQRRQ*PGSLPE
Trigger: CTCGGGGAGTGAACCAGGCCACTGCCGGCGTTGTGG...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTGATTTGCCGGAAATaGTTGAGGCCACAACGCCGG +
Preference number: 4 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWVICRK*LRPQRR
Trigger: CCGGCGTTGTGGCCTCAACCATTTCCGGCAAATCAC...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATGTAATGGCAGTGGTGTaGCTGCCCCTGGGACTCCAA +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYVMAVV*LPLGLQ
Trigger: TTGGAGTCCCAGGGGCAGCCACACCACTGCCATTAC...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTTATGGAGGGAGTCTTTaGAAGTGTCATGCATGTCCT +
Preference number: 4 (lower is better)
Translates to: QAVHVPSVLILSTGQREPYGGSL*KCHACP
Trigger: AGGACATGCATGACACTTCCAAAGACTCCCTCCATA...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAGAGCACCGAGAGGCCTaGGCAGCACCATCGCTGGAG +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLEHREA*AAPSLE
Trigger: CTCCAGCGATGGTGCTGCCCAGGCCTCTCGGTGCTC...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTCAATTGCGTAGAAGGTaGAACGATCTTCCTATTCAA +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLQLRRR*NDLPIQ
Trigger: TTGAATAGGAAGATCGTTCCACCTTCTACGCAATTG...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGGTGGCTGAAAGGAGTTaGAGCCGCTGGCTCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWVAERS*SRWLCP
Trigger: AGGACAGAGCCAGCGGCTCCAACTCCTTTCAGCCAC...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACAGCCTCCCCAGTAGCTaGGATTATAGGCGCCTGCCA +
Preference number: 4 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHSLPSS*DYRRLP
Trigger: TGGCAGGCGCCTATAATCCCAGCTACTGGGGAGGCT...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGTTGGCAGCAAACAGCTaGCTGGTTTGCTGCGCCGAT +
Preference number: 4 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWLAANS*LVCCAD
Trigger: ATCGGCGCAGCAAACCAGCCAGCTGTTTGCTGCCAA...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR CAA 72 bp TTTAGGAGGGAAAGGCACTCACTCTCCTTCTGCTTTTaGAGGAAAGCTGTCACTCAGCAGCTCCGCCTGACC +
Preference number: 4 (lower is better)
Translates to: FRRERHSLSFCF*RKAVTQQLRLT
Trigger: GGTCAGGCGGAGCTGCTGAGTGACAGCTTTCCTCAAAAAGCAGAAGGAGAGTGAGTGCCTTTCCCTCCTAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCCTGTTTGGAAGAGGTTaGGTTCACACTCCAGGTAGT +
Preference number: 4 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLILFGRG*VHTPGS
Trigger: ACTACCTGGAGTGTGAACTCAACCTCTTCCAAACAG...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATCAGACAGGCTCCGCTaGGCCTTCTCGGTGTCCTCC +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLSDRLR*AFSVSS
Trigger: GGAGGACACCGAGAAGGCTCAGCGGAGCCTGTCTGA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp CCAAACAGAAAGGGTGTCGCTATGGAGGGAGTCTTTGGAAGTGTCATGCATGTCAGGTCAGCGTGGTTCTaGACCAGCTCGCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: PNRKGVAMEGVFGSVMHVRSAWF*TSSLYF
Trigger: GAAGTACAGCGAGCTGGTTCAGAACCACGCTGACCT...GACATGCATGACACTTCCAAAGACTCCCTCCATAGCGACACCCTTTCTGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACGCTGGCCCTGGTCACTaGTGCGCTCCAACGAATCCT +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHAGPGH*CAPTNP
Trigger: AGGATTCGTTGGAGCGCATCAGTGACCAGGGCCAGC...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGCTGCCTTGCAGAACCTaGAGCTCCCGTTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: PISSADTSLAQYGGHTSELPCRT*SSRWLV
Trigger: CACAAGCCAACGGGAGCTTCAGGTTCTGCAAGGCAG...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGCTGGCCAGTTTGAGCTaGGTGTCCTGCAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWLASLS*VSCSSF
Trigger: GAAAGAACTGCAGGACACTCAGCTCAAACTGGCCAG...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGCTGTGCTGGCCAGTTTaGGCTGAGTGTCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWLCWPV*AECPAV
Trigger: AACTGCAGGACACTCAGCTCAAACTGGCCAGCACAG...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGTTTGCCGGAAATGGTTaGGGCCACAACGCCGGCAGT +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKFAGNG*GHNAGS
Trigger: ACTGCCGGCGTTGTGGCCTCAACCATTTCCGGCAAA...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTCTCCTGCCGTCCTTCTaGCTGTGCAGATCTCAGGGT +
Preference number: 4 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSLLPSF*LCRSQG
Trigger: ACCCTGAGATCTGCACAGTCAGAAGGACGGCAGGAG...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATATAAACCTTGGTGTCTaGCTTGGTAGCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDINLGV*LGSWDS
Trigger: ACTGTCCCAGCTACCAAGTCAGACACCAAGGTTTAT...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATCTTCCAGCTGCAAGCTaGGAACTAGCTCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYLPAAS*ELAPAQ
Trigger: CTGTGCAGGAGCTAGTTCTCAGCTTGCAGCTGGAAG...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGAGACCAGAAGGTCTGTaGCCCTTTCTCATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWRPEGL*PFLMVG
Trigger: ACCCACCATGAGAAAGGGGCACAGACCTTCTGGTCT...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CCAAACAGAAAGGGTGTCGCTATGGAGGGAGTCTTTGGAAGTGTCATGCATGTCCTTCCAGCAGAGCACTaGGTTGCTAGACAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: PNRKGVAMEGVFGSVMHVLPAEH*VARQRQ
Trigger: CTGCCTCTGTCTAGCAACGCAGTGCTCTGCTGGAAG...GACATGCATGACACTTCCAAAGACTCCCTCCATAGCGACACCCTTTCTGTTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCAGTTTCAGGTAGATGCTaGACAGCTGGCCATACCCCT +
Preference number: 4 (lower is better)
Translates to: SRTVHSGREVVLLISPAPVSGRC*TAGHTP
Trigger: AGGGGTATGGCCAGCTGTGCAGCATCTACCTGAAAC...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGCAGTTTCAGGTAGATaGTGCACAGCTGGCCATACC +
Preference number: 4 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWAVSGR*CTAGHT
Trigger: GGTATGGCCAGCTGTGCAGCATCTACCTGAAACTGC...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCTGCTCGGCCAGATCTaGTTCCAGCTCGCTGACGTG +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDLLGQI*FQLADV
Trigger: CACGTCAGCGAGCTGGAAGCAGATCTGGCCGAGCAG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATGCTGCCGCAGGTGCTaGTGCTCGGCCAGATCTGCT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLCCRRC*CSARSA
Trigger: AGCAGATCTGGCCGAGCAGCAGCACCTGCGGCAGCA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACGAGCTCGTCCAGTTCTaGCCGCAGGAATTCACAGTC +
Preference number: 4 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHELVQF*PQEFTV
Trigger: GACTGTGAATTCCTGCGGGCAGAACTGGACGAGCTC...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCTCCTCCCTATGAGCTaGGCCACTCACCAGGCTGTC +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDLLPMS*ATHQAV
Trigger: GACAGCCTGGTGAGTGGCGCAGCTCATAGGGAGGAG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGGCGTCTTGTATCACCTaGTCCGCAGCCTTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: PISSADTSLAQYGGHTSEASCIT*SAAFLD
Trigger: GTCCAGGAAGGCTGCGGAGCAGGTGATACAAGACGC...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGCGTCTTGTATCACCTaGTCCGCAGCCTTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKASCIT*SAAFLD
Trigger: GTCCAGGAAGGCTGCGGAGCAGGTGATACAAGACGC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGGAGAGGAGGTGATCTaGAGACCCAGCGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKGEEVI*RPSAAD
Trigger: ATCAGCTGCGCTGGGTCTGCAGATCACCTCCTCTCC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATCAGCTTTTCTCCAGTTaGTCGATGCAGCTGGAAATG +
Preference number: 4 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDQLFSS*SMQLEM
Trigger: CATTTCCAGCTGCATCGAGCAACTGGAGAAAAGCTG...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGCAGCCAGGACACTCCTaGCGTCCTTCTGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: NDLPIQEDAKADVCRKELQPGHS*RPSDCA
Trigger: TGCACAGTCAGAAGGACGGCAGGAGTGTCCTGGCTG...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATAAAGTGCTGTTGGGCTaGCCATCCCTGGCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYKVLLG*PSLASC
Trigger: ACAGCTTGCCAGGGATGGGCAGCCCAACAGCACTTT...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATCACTCAGGCTGGAGTaGAGTGGGAAATCATGGCTC +
Preference number: 4 (lower is better)
Translates to: SRTVHSGREVVLLISPAPSLRLE*SGKSWL
Trigger: GAGCCATGATTTCCCACTGCACTCCAGCCTGAGTGA...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCAGAGGGAACTTCCAGCTaGAAGCTGAGAACTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SRTVHSGREVVLLISPAPEGTSS*KLRTSS
Trigger: GGAGCTAGTTCTCAGCTTGCAGCTGGAAGTTCCCTC...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACTACCCCTCGCTCAGGTaGCCCCACATCCTGCTCATG +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHYPSLR*PHILLM
Trigger: CATGAGCAGGATGTGGGGCCACCTGAGCGAGGGGTA...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACAGTCCAAGATGACCTaGATCAGCGGGGCGAGGCGG +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLQSKMT*ISGARR
Trigger: CCGCCTCGCCCCGCTGATCCAGGTCATCTTGGACTG...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTCGCAGGAAGTTGGGTaGGTTCTCAGGCAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDSQEVG*VLRQLG
Trigger: CCCCAGCTGCCTGAGAACCCACCCAACTTCCTGCGA...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTCCAGCTCGCTGACGTaGCCCTTCAGCTGCAGCACA +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDSSSLT*PFSCST
Trigger: TGTGCTGCAGCTGAAGGGCCACGTCAGCGAGCTGGA...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTTATATCGCTGTTCATTaGCTTGAGCTTTCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLYIAVH*LELSFL
Trigger: TAGAAAGGAAAGCTCAAGCCAATGAACAGCGATATA...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATGTCTTCCGCTGGCCCTaGTCACTGATGCGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDVFRWP*SLMRSN
Trigger: GTTGGAGCGCATCAGTGACCAGGGCCAGCGGAAGAC...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGCTCCGCAGCCTTCCTaGACCCCACCAGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKAPQPS*TPPEAF
Trigger: AAATGCTTCTGGTGGGGTCCAGGAAGGCTGCGGAGC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGCGTCGCTGGTCAAGTaGGCCAGCAGGGTTATGGAA +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKASLVK*ASRVME
Trigger: TTCCATAACCCTGCTGGCCCACTTGACCAGCGACGC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTTGGCACCATGAGCAATaGCGTCGCTGGTCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSWHHEQ*RRWSSG
Trigger: CCCACTTGACCAGCGACGCCATTGCTCATGGTGCCA...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGTGGCACCATGAGCAATaGCGTCGCTGGTCAAGTGGG +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKWHHEQ*RRWSSG
Trigger: CCCACTTGACCAGCGACGCCATTGCTCATGGTGCCA...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGATGCAGCCACAAGCTaGGCTGTGCTAGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWDAATS*AVLAAI
Trigger: AATTGCTGCTAGCACAGCCCAGCTTGTGGCTGCATC...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGGCAGCTGGGCTAGGTTaGGGCTGTCCTTATCAGCTT +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWAAGLG*GCPYQL
Trigger: AAGCTGATAAGGACAGCCCCAACCTAGCCCAGCTGC...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGGTAATGGCAGTGGTGTaGCTGCCCCTGGGACTCCAA +
Preference number: 4 (lower is better)
Translates to: PISSADTSLAQYGGHTSEVMAVV*LPLGLQ
Trigger: TTGGAGTCCCAGGGGCAGCCACACCACTGCCATTAC...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCAGCACTGGCCAGCCTaGATGCTAACTAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDQHWPA*MLTREA
Trigger: CGCCTCCCTAGTTAGCATCCAGGCTGGCCAGTGCTG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGCTCATGGGCAGCACTaGCCAGCCTGGATGCTAACT +
Preference number: 4 (lower is better)
Translates to: NDLPIQEDAKADVCRKELAHGQH*PAWMLT
Trigger: AGTTAGCATCCAGGCTGGCCAGTGCTGCCCATGAGC...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAGGGTGGGCCAGCACTTaGTCAGTGTGGAGGCGGAGA +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLGWAST*SVWRRR
Trigger: TCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCC...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACCCTGGAGCATGGACTaGGTGGGCCAGCACTTGGTC +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLPWSMD*VGQHLV
Trigger: GACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGG...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGTTTAGTTGCCACAACTaGGACAGGGAAGCCACGCAC +
Preference number: 4 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWFSCHN*DREATH
Trigger: GTGCGTGGCTTCCCTGTCCCAGTTGTGGCAACTAAA...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGCAGTGGTGCGATCTTaGCTCACTACAACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWAVVRS*LTTTSV
Trigger: GACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGC...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATAGGTGGTGCAGTCTCTaGAGGACAAGGATGGCAGAG +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYRWCSL*RTRMAE
Trigger: CTCTGCCATCCTTGTCCTCCAGAGACTGCACCACCT...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR TCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGACAGAGGCAGGCGGTTaGCAACAGACCAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: PISSADTSLAQYGGHTSETEAGG*QQTRRS
Trigger: AGACCTTCTGGTCTGTTGTCAACCGCCTGCCTCTGT...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGTCACCACCACAGGGCTaGTATGTTCTGACAGGGCTG +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKSPPQG*YVLTGL
Trigger: CAGCCCTGTCAGAACATATCAGCCCTGTGGTGGTGA...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTCCTCCCGCTGCCTCCTaGGCTCGTCCAGTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSPPAAS*ARPVLP
Trigger: GGGCAGAACTGGACGAGCTCAGGAGGCAGCGGGAGG...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGTGCCCAGTTTGCTTCTaGCTGGGCAGAAGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALCPVCF*LGRSFQ
Trigger: CTGGAAACTTCTGCCCAGTCAGAAGCAAACTGGGCA...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGGCCACGATGAGCACCTaGATAGCTTGCATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PISSADTSLAQYGGHTSEATMST*IACMRL
Trigger: CAGCCTCATGCAAGCTATTCAGGTGCTCATCGTGGC...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGCCACGATGAGCACCTaGATAGCTTGCATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKATMST*IACMRL
Trigger: CAGCCTCATGCAAGCTATTCAGGTGCTCATCGTGGC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000616821.4
CDS-3UTR TCA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGCCATCTCTTGGCGTTTaGTCTGTGTCAGCGTCATGC +
Preference number: 4 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALPSLGV*SVSASC
Trigger: GCATGACGCTGACACAGATCAAACGCCAAGAGATGG...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGGGGAACTGGGCTGTGTaGACCCTCTTGTCCCTCTTT +
Preference number: 4 (lower is better)
Translates to: PISSADTSLAQYGGHTSEGNWAV*TLLSLF
Trigger: AAAGAGGGACAAGAGGGTTCACACAGCCCAGTTCCC...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTAGCCGGGCAGAAAGATaGGCCTTGCTAGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSSRAER*ALLESH
Trigger: GTGTGACTCTAGCAAGGCTCATCTTTCTGCCCGGCT...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATGGCACAATCAGGGCTaGCTGCAGCCTCGACTTCCC +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLWHNQG*LQPRLP
Trigger: GGGAAGTCGAGGCTGCAGTCAGCCCTGATTGTGCCA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCACAAAGCCAACTAATCTaGCCGGAGCGACATGTACCT +
Preference number: 4 (lower is better)
Translates to: SRTVHSGREVVLLISPAPQSQLI*PERHVP
Trigger: AGGTACATGTCGCTCCGGTCAGATTAGTTGGCTTTG...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATAAGGTAGCAAGATGCTaGCCGGTTATTAAAGACCAG +
Preference number: 4 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDKVARC*PVIKDQ
Trigger: CTGGTCTTTAATAACCGGTCAGCATCTTGCTACCTT...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR GCA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGCTTTCTCATGGTGGGTaGCCAGTATGCACGTTCTGG +
Preference number: 4 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALLSHGG*PVCTFW
Trigger: CCAGAACGTGCATACTGGGCACCCACCATGAGAAAG...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCTTCCAGCAGAGCACTaGGTTGCTAGACAGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKLPAEH*VARQRQ
Trigger: CTGCCTCTGTCTAGCAACGCAGTGCTCTGCTGGAAG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGGTTTCAGGTAGATGCTaGACAGCTGGCCATACCCCT +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWVSGRC*TAGHTP
Trigger: AGGGGTATGGCCAGCTGTGCAGCATCTACCTGAAAC...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTGGCGGTCACTCATCTaGAGGTTGCCTGGGAACCTG +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDWRSLI*RLPGNL
Trigger: CAGGTTCCCAGGCAACCTGCAGATGAGTGACCGCCA...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTACTTCTCCTTTAGCTTaGTATATCGCTGTTCATTGG +
Preference number: 4 (lower is better)
Translates to: QAVHVPSVLILSTGQREPTSPLA*YIAVHW
Trigger: CCAATGAACAGCGATATAGCAAGCTAAAGGAGAAGT...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGAGTTCCTCATGGCTGTaGTGTCGGCATTCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWSSSWL*CRHSQG
Trigger: GCCTTGAGAATGCCGACAGCACAGCCATGAGGAACT...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATCCCCCAGCTCCTCCTaGTTGATGTCCAGTCCCCTG +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLSPSSS*LMSSPL
Trigger: CAGGGGACTGGACATCAAGCAGGAGGAGCTGGGGGA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp AGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTACTCCCCGAGAGGCCTaGTGCAGCTGGGCTAGGTTG +
Preference number: 4 (lower is better)
Translates to: REVVLLISPAPFKHVIKFTPREA*CSWARL
Trigger: CAACCTAGCCCAGCTGCAGCAGGCCTCTCGGGGAGT...AAACTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTTCTGTTGAGTGGCCCTaGCCCCCACCACCCCTCTTC +
Preference number: 4 (lower is better)
Translates to: REVVLLISPAPFKHVIKFSVEWP*PPPPLF
Trigger: GAAGAGGGGTGGTGGGGGGCAGGGCCACTCAACAGA...AAACTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATCTAGAAGAGGAAAAGTaGTGTTGGGCTGCCCATCCC +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYLEEEK*CWAAHP
Trigger: GGGATGGGCAGCCCAACAGCACTTTTCCTCTTCTAG...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGACAATCAGGGCTGACTaGAGCCTCGACTTCCCAAGC +
Preference number: 4 (lower is better)
Translates to: PISSADTSLAQYGGHTSETIRAD*SLDFPS
Trigger: GCTTGGGAAGTCGAGGCTGCAGTCAGCCCTGATTGT...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGGAGGGAACTTCCAGCTaGAAGCTGAGAACTAGCTCC +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWEGTSS*KLRTSS
Trigger: GGAGCTAGTTCTCAGCTTGCAGCTGGAAGTTCCCTC...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACCTATGCTACAGGTGGTaGAGTCTCTGGAGGACAAGG +
Preference number: 4 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHLCYRW*SLWRTR
Trigger: CCTTGTCCTCCAGAGACTGCACCACCTGTAGCATAG...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR GCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAAAGCCAGTGGCCACCTaGCCTGGGAAGGTAGGCACT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLKPVAT*PGKVGT
Trigger: AGTGCCTACCTTCCCAGGGCAGGTGGCCACTGGCTT...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACTGGGCACCTGCTTCATaGAGCTGGCCATCCGATCCA +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHWAPAS*SWPSDP
Trigger: TGGATCGGATGGCCAGCTCCATGAAGCAGGTGCCCA...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGTGTGCCCCTTTCTCATaGTGGGTGCCCAGTATGCAC +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKCAPFS*WVPSMH
Trigger: GTGCATACTGGGCACCCACCATGAGAAAGGGGCACA...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATACCCCTCGCTCAGGTaGCCCCACATCCTGCTCATG +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLYPSLR*PHILLM
Trigger: CATGAGCAGGATGTGGGGCCACCTGAGCGAGGGGTA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATCCAGCTCGCTGACGTaGCCCTTCAGCTGCAGCACA +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLSSSLT*PFSCST
Trigger: TGTGCTGCAGCTGAAGGGCCACGTCAGCGAGCTGGA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAGTCTTCCGCTGGCCCTaGTCACTGATGCGCTCCAAC +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLVFRWP*SLMRSN
Trigger: GTTGGAGCGCATCAGTGACCAGGGCCAGCGGAAGAC...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATGCTCCGCAGCCTTCCTaGACCCCACCAGAAGCATTT +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDAPQPS*TPPEAF
Trigger: AAATGCTTCTGGTGGGGTCCAGGAAGGCTGCGGAGC...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATAGCAGGGTTATGGAATaGAGAAGTCCACTGATGTCT +
Preference number: 4 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDSRVME*RSPLMS
Trigger: AGACATCAGTGGACTTCTCCATTCCATAACCCTGCT...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCAGCAGGGTTATGGAATaGAGAAGTCCACTGATGTCT +
Preference number: 4 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLISRVME*RSPLMS
Trigger: AGACATCAGTGGACTTCTCCATTCCATAACCCTGCT...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGTGATTTGCCGGAAATaGTTGAGGCCACAACGCCGG +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKVICRK*LRPQRR
Trigger: CCGGCGTTGTGGCCTCAACCATTTCCGGCAAATCAC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATGGTGTGGCTGCCCCTaGGACTCCAAGGATTTGGCC +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLWCGCP*DSKDLA
Trigger: GGCCAAATCCTTGGAGTCCCAGGGGCAGCCACACCA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCAATAGTCAGCAGGACTaGATGTTGGTCCTCTCTGTT +
Preference number: 4 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLINSQQD*MLVLSV
Trigger: AACAGAGAGGACCAACATCCAGTCCTGCTGACTATT...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGGGGGAGAATGGCTTTaGCATTCACAGCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKGGEWL*HSQPGH
Trigger: GTGTCCTGGCTGTGAATGCCAAAGCCATTCTCCCCC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGGGGGAGAATGGCTTTaGCATTCACAGCCAGGACAC +
Preference number: 4 (lower is better)
Translates to: NDLPIQEDAKADVCRKELGGEWL*HSQPGH
Trigger: GTGTCCTGGCTGTGAATGCCAAAGCCATTCTCCCCC...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGAGCAGTGGAAATCCATaGCACTGCCCAAAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKSSGNP*HCPKRG
Trigger: CCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCT...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGAGCAGTGGAAATCCATaGCACTGCCCAAAGAGGGGG +
Preference number: 4 (lower is better)
Translates to: PISSADTSLAQYGGHTSESSGNP*HCPKRG
Trigger: CCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCT...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCAGGGGTGTGCCCTTTaGGAGAGTTGGCTATGTGAG +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKQGCAL*ESWLCE
Trigger: CTCACATAGCCAACTCTCCCAAAGGGCACACCCCTG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTGGGCAGCACCATCGCTaGAGCTACCACAGTTGGGGG +
Preference number: 4 (lower is better)
Translates to: REVVLLISPAPFKHVIKFGQHHR*SYHSWG
Trigger: CCCCCAACTGTGGTAGCTCCAGCGATGGTGCTGCCC...AAACTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGAAGCACTTGGTCAGTGTaGAGGCGGAGATGGAGCACC +
Preference number: 4 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRSTWSV*RRRWST
Trigger: GGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCT...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATCTGCAGAAAGGAGTTaGGAATCACTCCCACACTCC +
Preference number: 4 (lower is better)
Translates to: SRTVHSGREVVLLISPAPSAERS*ESLPHS
Trigger: GGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGA...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGGAGGAAAAGTGCTGTTaGGCTGCCCATCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: PISSADTSLAQYGGHTSEEEKCC*AAHPWQ
Trigger: TTGCCAGGGATGGGCAGCCCAACAGCACTTTTCCTC...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATTTTAGTTGCCACAACTaGGACAGGGAAGCCACGCAC +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYFSCHN*DREATH
Trigger: GTGCGTGGCTTCCCTGTCCCAGTTGTGGCAACTAAA...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CCAAACAGAAAGGGTGTCGCTATGGAGGGAGTCTTTGGAAGTGTCATGCATGTCTGCAACCTCTGCCTCTaGGGTTCAGGTGATTCTCCT +
Preference number: 4 (lower is better)
Translates to: PNRKGVAMEGVFGSVMHVCNLCL*GSGDSP
Trigger: AGGAGAATCACCTGAACCCCAGAGGCAGAGGTTGCA...GACATGCATGACACTTCCAAAGACTCCCTCCATAGCGACACCCTTTCTGTTTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGGACCCGTATTCTGGTaGGATTTTAGGGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWGPVFW*DFRGTA
Trigger: AGCAGTACCCCTAAAATCCCACCAGAATACGGGTCC...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGTCTGGAGGACAAGGATaGCAGAGAGAGGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: NDLPIQEDAKADVCRKELSGGQG*QREGKA
Trigger: GGCTTTGCCCTCTCTCTGCCATCCTTGTCCTCCAGA...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CCA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCCAGCAAACAGCTGGCTaGTTTGCTGCGCCGATGGCT +
Preference number: 4 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVQQTAG*FAAPMA
Trigger: AGCCATCGGCGCAGCAAACCAGCCAGCTGTTTGCTG...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATGATGCTGACAGTCTCTaGAGGGGGCTCTGGGTTAGG +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDDADSL*RGLWVR
Trigger: CCTAACCCAGAGCCCCCTCCAGAGACTGTCAGCATC...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616821.4
3UTR CAA 72 bp GTCCAAACAGAAAGGGTGTCGCTATGGAGGGAGTCTTaGGAAGTGTCATGCATGTCCTCGGCACTGGGTAAT +
Preference number: 4 (lower is better)
Translates to: VQTERVSLWRES*EVSCMSSALGN
Trigger: ATTACCCAGTGCCGAGGACATGCATGACACTTCCAAAGACTCCCTCCATAGCGACACCCTTTCTGTTTGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CAA 72 bp ATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTTaGAGCCTCGTCACGGGAACTGGGCTGTGTGAACCC +
Preference number: 4 (lower is better)
Translates to: ISPAPFKHVIKF*SLVTGTGLCEP
Trigger: GGGTTCACACAGCCCAGTTCCCGTGACGAGGCTCAAAAACTTGATCACATGCTTGAATGGAGCTGGTGAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATACAGAGGCAGGCGGTTaGCAACAGACCAGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDTEAGG*QQTRRS
Trigger: AGACCTTCTGGTCTGTTGTCAACCGCCTGCCTCTGT...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATAGGTCAGCGTGGTTCTaGACCAGCTCGCTGTACTTC +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDRSAWF*TSSLYF
Trigger: GAAGTACAGCGAGCTGGTTCAGAACCACGCTGACCT...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACTGCCTTGCAGAACCTaGAGCTCCCGTTGGCTTGTG +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLLPCRT*SSRWLV
Trigger: CACAAGCCAACGGGAGCTTCAGGTTCTGCAAGGCAG...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGTGCCCAGTTTGCTTCTaGCTGGGCAGAAGTTTCCAG +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKCPVCF*LGRSFQ
Trigger: CTGGAAACTTCTGCCCAGTCAGAAGCAAACTGGGCA...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAAATTCCTCCTCCCTATaGGCTGCGCCACTCACCAGG +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLNSSSL*AAPLTR
Trigger: CCTGGTGAGTGGCGCAGCTCATAGGGAGGAGGAATT...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCTGGCCAGTTTGAGCTaGGTGTCCTGCAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKLASLS*VSCSSF
Trigger: GAAAGAACTGCAGGACACTCAGCTCAAACTGGCCAG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACCTGTGCTGGCCAGTTTaGGCTGAGTGTCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHLCWPV*AECPAV
Trigger: AACTGCAGGACACTCAGCTCAAACTGGCCAGCACAG...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGAGCTGGAAATGGATGTaGCCGTGGAGAGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKSWKWM*PWRGGD
Trigger: ATCACCTCCTCTCCACGGTCACATCCATTTCCAGCT...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATCATTCACCTCCAATTTaGCTCCTGTGTCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYHSPPI*LLCLLL
Trigger: GAGCAGGAGACACAGGAGTCAAATTGGAGGTGAATG...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR TCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATTTGCCGGAAATGGTTaGGGCCACAACGCCGGCAGT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLFAGNG*GHNAGS
Trigger: ACTGCCGGCGTTGTGGCCTCAACCATTTCCGGCAAA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACCCCAAGAGCTCCAAATaGTCTCCTTGCTTTGGGATC +
Preference number: 4 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHPKSSK*SPCFGI
Trigger: GATCCCAAAGCAAGGAGATCATTTGGAGCTCTTGGG...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCAGGGGTTGGTTCACAGTaGTCAAACAGAAGTCTCACA +
Preference number: 4 (lower is better)
Translates to: SRTVHSGREVVLLISPAPGVGSQ*SNRSLT
Trigger: TGTGAGACTTCTGTTTGATCACTGTGAACCAACCCC...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGGTGGGTGCCCAGTATaGACGTTCTGGCGTGTTTTT +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKGGCPV*TFWRVF
Trigger: AAAAACACGCCAGAACGTGCATACTGGGCACCCACC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTGCCTGCTGCCGCAGGTaGTGCTGCTCGGCCAGATCT +
Preference number: 4 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSACCRR*CCSARS
Trigger: AGATCTGGCCGAGCAGCAGCACCTGCGGCAGCAGGC...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACGAGCTCGTCCAGTTCTaGCCGCAGGAATTCACAGTC +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHELVQF*PQEFTV
Trigger: GACTGTGAATTCCTGCGGGCAGAACTGGACGAGCTC...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATGAGCTCGTCCAGTTCTaGCCGCAGGAATTCACAGTC +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDELVQF*PQEFTV
Trigger: GACTGTGAATTCCTGCGGGCAGAACTGGACGAGCTC...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAGCGTCTTGTATCACCTaGTCCGCAGCCTTCCTGGAC +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLASCIT*SAAFLD
Trigger: GTCCAGGAAGGCTGCGGAGCAGGTGATACAAGACGC...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGTTTCCCTGCCATACTaGTTACAGGCCTCGGTCAGT +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKVSLPY*LQASVS
Trigger: ACTGACCGAGGCCTGTAAGCAGTATGGCAGGGAAAC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGAGTTCCTCATGGCTGTaGTGTCGGCATTCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: NDLPIQEDAKADVCRKELSSSWL*CRHSQG
Trigger: GCCTTGAGAATGCCGACAGCACAGCCATGAGGAACT...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAGGGATGCTGTACCCCTaGCGCTCTCCACAATCTCTC +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLGMLYP*RSPQSL
Trigger: GAGAGATTGTGGAGAGCGGCAGGGGTACAGCATCCC...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000616821.4
CDS-3UTR GCA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGCTTCGATCTGTGATTTaGCGGAAATGGTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWLRSVI*RKWLRP
Trigger: TGGCCTCAACCATTTCCGGCAAATCACAGATCGAAG...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTTCAGCCCCAGGGGTGTaGCCTTTGGGAGAGTTGGCT +
Preference number: 4 (lower is better)
Translates to: REVVLLISPAPFKHVIKFSAPGV*PLGELA
Trigger: AGCCAACTCTCCCAAAGGGCACACCCCTGGGGCTGA...AAACTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATAAAGTGCTGTTGGGCTaGCCATCCCTGGCAAGCTGT +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDKVLLG*PSLASC
Trigger: ACAGCTTGCCAGGGATGGGCAGCCCAACAGCACTTT...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTCTAGAAGAGGAAAAGTaGTGTTGGGCTGCCCATCCC +
Preference number: 4 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSLEEEK*CWAAHP
Trigger: GGGATGGGCAGCCCAACAGCACTTTTCCTCTTCTAG...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGGAAATCATGGCTCATTaGAGCCTCAAACTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWEIMAH*SLKLLG
Trigger: GCCCAGGAGTTTGAGGCTGCAATGAGCCATGATTTC...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACGCCCCTTTCTCATGGTaGGTGCCCAGTATGCACGTT +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHAPFSW*VPSMHV
Trigger: AACGTGCATACTGGGCACCCACCATGAGAAAGGGGC...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACTGTGCCCCTTTCTCATaGTGGGTGCCCAGTATGCAC +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHCAPFS*WVPSMH
Trigger: GTGCATACTGGGCACCCACCATGAGAAAGGGGCACA...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCTTGCAGGGTGTCAGCTaGGAGGCAGGAGTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVLQGVS*EAGVEF
Trigger: AAACTCCACTCCTGCCTCCCAGCTGACACCCTGCAA...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTGCAGGGTGTCAGCTaGGAGGCAGGAGTGGAGTTT +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDLQGVS*EAGVEF
Trigger: AAACTCCACTCCTGCCTCCCAGCTGACACCCTGCAA...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAAGGCTCGCAGGAAGTTaGGTGGGTTCTCAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLRLAGS*VGSQAA
Trigger: AGCTGCCTGAGAACCCACCCAACTTCCTGCGAGCCT...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATGGGCTTGTCTGGCCATaGACACCTGTTTGGTCACCT +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDGLVWP*TPVWSP
Trigger: AGGTGACCAAACAGGTGTCCATGGCCAGACAAGCCC...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCTACCTGGGCTTGTCTaGCCATGGACACCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDLPGLV*PWTPVW
Trigger: CCAAACAGGTGTCCATGGCCAGACAAGCCCAGGTAG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCGTTCCAAATCTACCTaGGCTTGTCTGGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKRSKST*ACLAMD
Trigger: GTCCATGGCCAGACAAGCCCAGGTAGATTTGGAACG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGAGCTCCCGTTGGCTTGTaGCAAGTTCCTGCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRAPVGL*QVPASS
Trigger: GCTTGAAGCAGGAACTTGCCACAAGCCAACGGGAGC...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATGCTCCCGTTGGCTTGTaGCAAGTTCCTGCTTCAAGC +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDAPVGL*QVPASS
Trigger: GCTTGAAGCAGGAACTTGCCACAAGCCAACGGGAGC...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTATCAGCTTTCACCTTaGATGCAGCCACAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHYQLSP*MQPQAG
Trigger: CCCAGCTTGTGGCTGCATCCAAGGTGAAAGCTGATA...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATGCAGCTGGGCTAGGTTaGGGCTGTCCTTATCAGCTT +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDAAGLG*GCPYQL
Trigger: AAGCTGATAAGGACAGCCCCAACCTAGCCCAGCTGC...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACGATTTGGCCTGTGGCTaGGGAAATAACACACACGAG +
Preference number: 4 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHDLACG*GNNTHE
Trigger: CTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATGAAAGGGTGTCGCTATaGAGGGAGTCTTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYERVSL*RESLEV
Trigger: CACTTCCAAAGACTCCCTCCATAGCGACACCCTTTC...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCAGGATACCCATTGTTGTaGGGGTCAAATAGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: SRTVHSGREVVLLISPAPGYPLL*GSNSQQ
Trigger: CTGCTGACTATTTGACCCCCACAACAATGGGTATCC...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTCTCAGGGTAGTGTCCTaGTTTGGAATCCATCAGCCC +
Preference number: 4 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSLRVVS*FGIHQP
Trigger: GGGCTGATGGATTCCAAACCAGGACACTACCCTGAG...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACCAAAGAGGGGGAGAATaGCTTTGGCATTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHQRGGE*LWHSQP
Trigger: TGGCTGTGAATGCCAAAGCCATTCTCCCCCTCTTTG...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATTGTTGGAGCAGATCCTaGGAAGTGCTTGATGGCTAC +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYCWSRS*EVLDGY
Trigger: GTAGCCATCAAGCACTTCCCAGGATCTGCTCCAACA...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGGCCACTGTGCCCGGCTaGGCAGAGAATCTTAATTTG +
Preference number: 4 (lower is better)
Translates to: PISSADTSLAQYGGHTSEATVPG*AENLNL
Trigger: CAAATTAAGATTCTCTGCCCAGCCGGGCACAGTGGC...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTGGTTCTTCCAGCCACTaGGTTAGAGGGACCCGTATT +
Preference number: 4 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSGSSSH*VRGTRI
Trigger: AATACGGGTCCCTCTAACCCAGTGGCTGGAAGAACC...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATAGTTGCTCTAGACAGTaGTTCTTCCAGCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYSCSRQ*FFQPLG
Trigger: ACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACT...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CCAAACAGAAAGGGTGTCGCTATGGAGGGAGTCTTTGGAAGTGTCATGCATGTCTCCCGTGTTACCTGGTaGCATAAACCTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: PNRKGVAMEGVFGSVMHVSRVTW*HKPWCL
Trigger: CAGACACCAAGGTTTATGCCACCAGGTAACACGGGA...GACATGCATGACACTTCCAAAGACTCCCTCCATAGCGACACCCTTTCTGTTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGAAGACCAGGGTCAAATaGAGCCAGGAGACCCCTCTA +
Preference number: 4 (lower is better)
Translates to: PISSADTSLAQYGGHTSEKTRVK*SQETPL
Trigger: TAGAGGGGTCTCCTGGCTCCATTTGACCCTGGTCTT...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR CAA 72 bp TTCTCTGACCCAAGAGCTCCAAATGATCTCCTTGCTTaGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGC +
Preference number: 4 (lower is better)
Translates to: FSDPRAPNDLLA*GSKSVTVQHLG
Trigger: GCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGCAAGGAGATCATTTGGAGCTCTTGGGTCAGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGAGGCATCCATGTCCATaGGGTCATCCTTCTCTAGGA +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKRHPCP*GHPSLG
Trigger: TCCTAGAGAAGGATGACCTCATGGACATGGATGCCT...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATGGGATCACTGCTGAATaGACTGCCAAAGATGTCATC +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYGITAE*TAKDVI
Trigger: GATGACATCTTTGGCAGTTCATTCAGCAGTGATCCC...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACCTGGCCAGTTTGAGCTaGGTGTCCTGCAGTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHLASLS*VSCSSF
Trigger: GAAAGAACTGCAGGACACTCAGCTCAAACTGGCCAG...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACTGTGCTGGCCAGTTTaGGCTGAGTGTCCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLLCWPV*AECPAV
Trigger: AACTGCAGGACACTCAGCTCAAACTGGCCAGCACAG...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACAGCTGGAAATGGATGTaGCCGTGGAGAGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHSWKWM*PWRGGD
Trigger: ATCACCTCCTCTCCACGGTCACATCCATTTCCAGCT...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACCTGCTCGGGATTTGCTaGGCATCTCCTCTATTCTGG +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHLLGIC*ASPLFW
Trigger: CCAGAATAGAGGAGATGCTCAGCAAATCCCGAGCAG...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000616821.4
CDS-3UTR TCA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGTGTCAGCGTCATGCTTaGGAAGTCCATGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALCQRHA*EVHVVC
Trigger: ACAGACAACATGGACTTCTCAAGCATGACGCTGACA...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCCATCTCTTGGCGTTTaGTCTGTGTCAGCGTCATGC +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDPSLGV*SVSASC
Trigger: GCATGACGCTGACACAGATCAAACGCCAAGAGATGG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACCCATCTCTTGGCGTTTaGTCTGTGTCAGCGTCATGC +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHPSLGV*SVSASC
Trigger: GCATGACGCTGACACAGATCAAACGCCAAGAGATGG...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATAGCTCTCCCAGTTTTTaGCGCTCCTTCTGCAATTCA +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYSSPSF*RSFCNS
Trigger: TGAATTGCAGAAGGAGCGTCAAAAACTGGGAGAGCT...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGGAAAAGAACAGAGATaGCCATGGGTCCAAACAGAA +
Preference number: 4 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWGKEQR*PWVQTE
Trigger: TTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCC...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACGGGAGCAATTGCATCTaGTCTTCCGGGTTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHGSNCI*SSGFVN
Trigger: ATTGACAAACCCGGAAGATCAGATGCAATTGCTCCC...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTCCCAAGAGCTCCAAATaGTCTCCTTGCTTTGGGATC +
Preference number: 4 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSPKSSK*SPCFGI
Trigger: GATCCCAAAGCAAGGAGATCATTTGGAGCTCTTGGG...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACCTGGTCTTGAACTCCTaGCCTCAGGTGATCCTACCA +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHLVLNS*PQVILP
Trigger: TGGTAGGATCACCTGAGGTCAGGAGTTCAAGACCAG...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCAAAGCCAACTAATCTaGCCGGAGCGACATGTACCT +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKQSQLI*PERHVP
Trigger: AGGTACATGTCGCTCCGGTCAGATTAGTTGGCTTTG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCTTTCTCATGGTGGGTaGCCAGTATGCACGTTCTGG +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDLSHGG*PVCTFW
Trigger: CCAGAACGTGCATACTGGGCACCCACCATGAGAAAG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGGGTGGCCCCACATCCTaGTCATGTCACTCAATTCAT +
Preference number: 4 (lower is better)
Translates to: PISSADTSLAQYGGHTSEGGPTS*SCHSIH
Trigger: ATGAATTGAGTGACATGAGCAGGATGTGGGGCCACC...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATGCAGTTTCAGGTAGATaGTGCACAGCTGGCCATACC +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDAVSGR*CTAGHT
Trigger: GGTATGGCCAGCTGTGCAGCATCTACCTGAAACTGC...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp AGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTGGAGAGGAGGTGATCTaGAGACCCAGCGCAGCTGAT +
Preference number: 4 (lower is better)
Translates to: REVVLLISPAPFKHVIKFGEEVI*RPSAAD
Trigger: ATCAGCTGCGCTGGGTCTGCAGATCACCTCCTCTCC...AAACTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGCAGCTTTTCTCCAGTTaGTCGATGCAGCTGGAAATG +
Preference number: 4 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALQLFSS*SMQLEM
Trigger: CATTTCCAGCTGCATCGAGCAACTGGAGAAAAGCTG...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATAGTTCCTCATGGCTGTaGTGTCGGCATTCTCAAGGC +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDSSSWL*CRHSQG
Trigger: GCCTTGAGAATGCCGACAGCACAGCCATGAGGAACT...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACAGCTTTCACCTTGGATaGAGCCACAAGCTGGGCTGT +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHSFHLG*SHKLGC
Trigger: ACAGCCCAGCTTGTGGCTGCATCCAAGGTGAAAGCT...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGTCGGTTACCACTTCTTaGAGTGTAGGTGGAGATGCC +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKSVTTS*SVGGDA
Trigger: GGCATCTCCACCTACACTGCAAGAAGTGGTAACCGA...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTTCTTTGGAAGTGTCATaGATGTCCTCGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSSLEVS*MSSALG
Trigger: ACCCAGTGCCGAGGACATGCATGACACTTCCAAAGA...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGTCCTATTCAAGAGGATaGCAAGGCAGACGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKSYSRG*QGRRLQ
Trigger: CTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGA...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGGGAACCTGGGATTTTTaGTGTGGTACTCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALGTWDF*CGTPSW
Trigger: CCAAGATGGAGTACCACACCAAAAATCCCAGGTTCC...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGGTTGCCTGGGAACCTaGGATTTTTGGTGTGGTACT +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKGCLGT*DFWCGT
Trigger: AGTACCACACCAAAAATCCCAGGTTCCCAGGCAACC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACCGTTCCAAATCTACCTaGGCTTGTCTGGCCATGGAC +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHRSKST*ACLAMD
Trigger: GTCCATGGCCAGACAAGCCCAGGTAGATTTGGAACG...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGTCTTTGGCAAGCTaGCACATAGATTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHWSLAS*HIDSSV
Trigger: CACAGAGGAATCTATGTGCCAGCTTGCCAAAGACCA...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTGGAGGTTCTTCAAGCTaGTTCAGGGCGTCTTGTATC +
Preference number: 4 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSGGSSS*FRASCI
Trigger: GATACAAGACGCCCTGAACCAGCTTGAAGAACCTCC...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGATCCACTGATGTCTTCTaGGCAGGCCAGATACTGGCT +
Preference number: 4 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRSTDVF*AGQILA
Trigger: AGCCAGTATCTGGCCTGCCCAGAAGACATCAGTGGA...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTCCACTGATGTCTTCTaGGCAGGCCAGATACTGGCT +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDSTDVF*AGQILA
Trigger: AGCCAGTATCTGGCCTGCCCAGAAGACATCAGTGGA...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTCAGGCAGTTCCTCATaGCTGTGCTGTCGGCATTCT +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDSGSSS*LCCRHS
Trigger: AGAATGCCGACAGCACAGCCATGAGGAACTGCCTGA...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACTCCACAATCTCTCTCTaGAGGTCCTTAGAGGCCACG +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHSTISL*RSLEAT
Trigger: CGTGGCCTCTAAGGACCTCCAGAGAGAGATTGTGGA...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000616821.4
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATGATGCAGCCACAAGCTaGGCTGTGCTAGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDDAATS*AVLAAI
Trigger: AATTGCTGCTAGCACAGCCCAGCTTGTGGCTGCATC...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGATTTGGCCTGTGGCTaGGGAAATAACACACACGAG +
Preference number: 4 (lower is better)
Translates to: NDLPIQEDAKADVCRKELDLACG*GNNTHE
Trigger: CTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACGGGACTCCAAGGATTTaGCCTGTGGCTGGGGAAATA +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHGTPRI*PVAGEI
Trigger: TATTTCCCCAGCCACAGGCCAAATCCTTGGAGTCCC...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGCAAAGAGGGGGAGAATaGCTTTGGCATTCACAGCCA +
Preference number: 4 (lower is better)
Translates to: NDLPIQEDAKADVCRKELQRGGE*LWHSQP
Trigger: TGGCTGTGAATGCCAAAGCCATTCTCCCCCTCTTTG...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGAGGAGTTGGAGCCGCTaGCTCTGTCCTTTCTCATTT +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKRSWSR*LCPFSF
Trigger: AAATGAGAAAGGACAGAGCCAGCGGCTCCAACTCCT...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCACAAGAACACACCGATTaGTTTAGTTGCCACAACTGG +
Preference number: 4 (lower is better)
Translates to: SRTVHSGREVVLLISPAPQEHTD*FSCHNW
Trigger: CCAGTTGTGGCAACTAAACCAATCGGTGTGTTCTTG...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACTGCAACCTCTGCCTCTaGGGTTCAGGTGATTCTCCT +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHCNLCL*GSGDSP
Trigger: AGGAGAATCACCTGAACCCCAGAGGCAGAGGTTGCA...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACGCCACTGTGCCCGGCTaGGCAGAGAATCTTAATTTG +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHATVPG*AENLNL
Trigger: CAAATTAAGATTCTCTGCCCAGCCGGGCACAGTGGC...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACACTGGAGGCTTTCCCTaGCAGGATTTCCAGAGATTT +
Preference number: 4 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHTGGFP*QDFQRF
Trigger: AAATCTCTGGAAATCCTGCCAGGGAAAGCCTCCAGT...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACTCTGGAGGGGGCTCTaGGTTAGGGAACATCATCTG +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLLWRGL*VREHHL
Trigger: CAGATGATGTTCCCTAACCCAGAGCCCCCTCCAGAG...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616821.4
3UTR CAA 72 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTaGATCTCACCAGCTCCATTCAAGCATGTGATCAAG +
Preference number: 4 (lower is better)
Translates to: SRTVHSGREVVL*ISPAPFKHVIK
Trigger: CTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CAA 72 bp CATTCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTaGTTGATCTCACCAGCTCCATTCAAGCATGTGATC +
Preference number: 4 (lower is better)
Translates to: HSRTVHSGREVV*LISPAPFKHVI
Trigger: GATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CAA 72 bp TGCGCCACTGTGCCCGGCTGGGCAGAGAATCTTAATTaGATCCATTACACTAGACTGTTTGCCCCATTTGTA +
Preference number: 4 (lower is better)
Translates to: CATVPGWAENLN*IHYTRLFAPFV
Trigger: TACAAATGGGGCAAACAGTCTAGTGTAATGGATCAAATTAAGATTCTCTGCCCAGCCGGGCACAGTGGCGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CAA 72 bp TCAGAATCGAACCCAACAGCATTGAATTGTTTCCTGTaGCTTTGGCTCCTGACAACACCACGGTGTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SESNPTALNCFL*LWLLTTPRCGA
Trigger: AGCACCACACCGTGGTGTTGTCAGGAGCCAAAGCAACAGGAAACAATTCAATGCTGTTGGGTTCGATTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR TCA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATTTGTTCACACCATTTTaGCTGTTGAAATTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDLFTPF*LLKLKG
Trigger: TCCCTTCAATTTCAACAGTCAAAATGGTGTGAACAA...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGTGCCTTCAATCCACTaGTCTCTCTGTATAGTCGCT +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKVPSIH*SLCIVA
Trigger: AGCGACTATACAGAGAGATCAGTGGATTGAAGGCAC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTCTGCTTCCAGCTCGCTaGCGTGGCCCTTCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSLLPAR*RGPSAA
Trigger: TGCAGCTGAAGGGCCACGTCAGCGAGCTGGAAGCAG...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCATTCACCTCCAATTTaGCTCCTGTGTCTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDHSPPI*LLCLLL
Trigger: GAGCAGGAGACACAGGAGTCAAATTGGAGGTGAATG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000616821.4
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGTGTCAGCGTCATGCTTaGGAAGTCCATGTTGTCTGT +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKCQRHA*EVHVVC
Trigger: ACAGACAACATGGACTTCTCAAGCATGACGCTGACA...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTCTAGCACCCTAACCTaGGAATCCATCTCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDSSTLT*ESISWR
Trigger: ACGCCAAGAGATGGATTCTCAGGTTAGGGTGCTAGA...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGTATAGGGTTCTTCCCTaGTGGGAGCAATTGCATCTG +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKYRVLP*WEQLHL
Trigger: CAGATGCAATTGCTCCCATCAGGGAAGAACCCTATA...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp CCAAACAGAAAGGGTGTCGCTATGGAGGGAGTCTTTGGAAGTGTCATGCATGTCTCACACCTGAAGTTCTaGTTGCTCCAAGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: PNRKGVAMEGVFGSVMHVSHLKF*LLQASL
Trigger: AAGAGATGCTTGGAGCAATCAGAACTTCAGGTGTGA...GACATGCATGACACTTCCAAAGACTCCCTCCATAGCGACACCCTTTCTGTTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACATCCTGGGAAGTGCTTaGTGGCTACCACCAATGAGT +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHILGSA*WLPPMS
Trigger: ACTCATTGGTGGTAGCCATCAAGCACTTCCCAGGAT...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGCACTTTTGGAAATGTTaGCCCGCATCAAGAACACAC +
Preference number: 4 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALHFWKC*PASRTH
Trigger: GTGTGTTCTTGATGCGGGTCAACATTTCCAAAAGTG...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAAGACCAGAAGGTCTGTaGCCCTTTCTCATGGTGGGT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLRPEGL*PFLMVG
Trigger: ACCCACCATGAGAAAGGGGCACAGACCTTCTGGTCT...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACGGTGGCCCCACATCCTaGTCATGTCACTCAATTCAT +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHGGPTS*SCHSIH
Trigger: ATGAATTGAGTGACATGAGCAGGATGTGGGGCCACC...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAGTTTCAGGTAGATGCTaGACAGCTGGCCATACCCCT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLVSGRC*TAGHTP
Trigger: AGGGGTATGGCCAGCTGTGCAGCATCTACCTGAAAC...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAGCAGTTTCAGGTAGATaGTGCACAGCTGGCCATACC +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLAVSGR*CTAGHT
Trigger: GGTATGGCCAGCTGTGCAGCATCTACCTGAAACTGC...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCAGCTTTTCTCCAGTTaGTCGATGCAGCTGGAAATG +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKQLFSS*SMQLEM
Trigger: CATTTCCAGCTGCATCGAGCAACTGGAGAAAAGCTG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAGACTCCTGTGTCTCCTaGTCGGGATTTGCTGAGCAT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLDSCVS*SGFAEH
Trigger: ATGCTCAGCAAATCCCGAGCAGGAGACACAGGAGTC...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000616821.4
CDS-3UTR GCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAAAACTCTTTAGGGGATaGTGTACCCCTGCCGCTCTC +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLKLFRG*CTPAAL
Trigger: GAGAGCGGCAGGGGTACAGCATCCCCTAAAGAGTTT...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000616821.4
CDS-3UTR GCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATACCACCAGATCAGCTaGATCCACCATGACAGTGGC +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLYHQIS*IHHDSG
Trigger: GCCACTGTCATGGTGGATGCAGCTGATCTGGTGGTA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGCTTCGATCTGTGATTTaGCGGAAATGGTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: PISSADTSLAQYGGHTSELRSVI*RKWLRP
Trigger: TGGCCTCAACCATTTCCGGCAAATCACAGATCGAAG...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTCTGTGTCAGCGTCATaGTTGAGAAGTCCATGTTGT +
Preference number: 4 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHSVSAS*LRSPCC
Trigger: ACAACATGGACTTCTCAAGCATGACGCTGACACAGA...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACTCTTTGGAAGTGTCATaGATGTCCTCGGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHSLEVS*MSSALG
Trigger: ACCCAGTGCCGAGGACATGCATGACACTTCCAAAGA...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGCACTCACTCTCCTTCTaGTTTTTGAGGAAAGCTGTC +
Preference number: 4 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALHSLSF*FLRKAV
Trigger: GACAGCTTTCCTCAAAAAGCAGAAGGAGAGTGAGTG...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATGCAGATCCTGGGAAGTaGTTGATGGCTACCACCAAT +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDADPGK*LMATTN
Trigger: ATTGGTGGTAGCCATCAAGCACTTCCCAGGATCTGC...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGAGTCCCACTTAGAAAATaGACAGAGAGGGAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRVPLRK*TERELG
Trigger: CCCCAACTCCCTCTCTGTGCATTTTCTAAGTGGGAC...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGACCGATTGGTTTAGTTaGCACAACTGGGACAGGGAA +
Preference number: 4 (lower is better)
Translates to: NDLPIQEDAKADVCRKELTDWFS*HNWDRE
Trigger: TTCCCTGTCCCAGTTGTGGCAACTAAACCAATCGGT...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGAAACTCTTTAGGGGATaGTGTACCCTCTATTCTGGC +
Preference number: 4 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALKLFRG*CTLYSG
Trigger: GCCAGAATAGAGGGTACAGCATCCCCTAAAGAGTTT...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000434438.6
CDS-3UTR CCA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGCCAGTATGCACGTTCTaGCGTGTTTTTCCTTTACAG +
Preference number: 4 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWPVCTF*RVFPLQ
Trigger: CTGTAAAGGAAAAACACGCCAGAACGTGCATACTGG...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCGGTTGCCTGGGAACCTaGGATTTTTGGTGTGGTACT +
Preference number: 4 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVGCLGT*DFWCGT
Trigger: AGTACCACACCAAAAATCCCAGGTTCCCAGGCAACC...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CCA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCTGCAGCACAACCCGCTaGCTCTCAGTCTTCATGTTT +
Preference number: 4 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVCSTTR*LSVFMF
Trigger: AAACATGAAGACTGAGAGCCAGCGGGTTGTGCTGCA...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACCCATGGACACCTGTTTaGTCACCTCTGCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHPWTPV*SPLHSS
Trigger: GGAAGAATGCAGAGGTGACCAAACAGGTGTCCATGG...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp CCAAACAGAAAGGGTGTCGCTATGGAGGGAGTCTTTGGAAGTGTCATGCATGTCAGAAGCATTTTTCGTTaGTCTTTGGCAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: PNRKGVAMEGVFGSVMHVRSIFR*SLASWH
Trigger: GTGCCAGCTTGCCAAAGACCAACGAAAAATGCTTCT...GACATGCATGACACTTCCAAAGACTCCCTCCATAGCGACACCCTTTCTGTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACGGAGGTTCTTCAAGCTaGTTCAGGGCGTCTTGTATC +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHGGSSS*FRASCI
Trigger: GATACAAGACGCCCTGAACCAGCTTGAAGAACCTCC...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATCCACAATCTCTCTCTaGAGGTCCTTAGAGGCCACG +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLSTISL*RSLEAT
Trigger: CGTGGCCTCTAAGGACCTCCAGAGAGAGATTGTGGA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000616821.4
CDS-3UTR CCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGTTCTTGCAGTGTAGGTaGAGATGCCTCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: NDLPIQEDAKADVCRKELFLQCR*RCLCSF
Trigger: GAAGGAACAGAGGCATCTCCACCTACACTGCAAGAA...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTTGGAGCTACCACAGTTaGGGGGCCCTGGAGACTCAG +
Preference number: 4 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSWSYHS*GALETQ
Trigger: CTGAGTCTCCAGGGCCCCCCAACTGTGGTAGCTCCA...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACCAAGAACACACCGATTaGTTTAGTTGCCACAACTGG +
Preference number: 4 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHQEHTD*FSCHNW
Trigger: CCAGTTGTGGCAACTAAACCAATCGGTGTGTTCTTG...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTCCCGTGTTACCTaGTGGCATAAACCTTGGTGT +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKDSRVT*WHKPWC
Trigger: ACACCAAGGTTTATGCCACCAGGTAACACGGGAATC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCGCTGTTCATTGGCTTaGGCTTTCCTTTCTATCTCA +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKRCSLA*AFLSIS
Trigger: TGAGATAGAAAGGAAAGCTCAAGCCAATGAACAGCG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAAGTTTCAATAGCAGCTaGAGTGGCCGCCATCTCCTT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLSFNSS*SGRHLL
Trigger: AAGGAGATGGCGGCCACTTCAGCTGCTATTGAAACT...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp AGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTCTGCTCGGGATTTGCTaGGCATCTCCTCTATTCTGG +
Preference number: 4 (lower is better)
Translates to: REVVLLISPAPFKHVIKFLLGIC*ASPLFW
Trigger: CCAGAATAGAGGAGATGCTCAGCAAATCCCGAGCAG...AAACTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR TCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATCTAGCACCCTAACCTaGGAATCCATCTCTTGGCGT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLSSTLT*ESISWR
Trigger: ACGCCAAGAGATGGATTCTCAGGTTAGGGTGCTAGA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGGAAAAGAACAGAGATaGCCATGGGTCCAAACAGAA +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKGKEQR*PWVQTE
Trigger: TTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATAATCCATCAGCCCTCTaGTGCTCACAAGTTTGTGCA +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDNPSAL*CSQVCA
Trigger: TGCACAAACTTGTGAGCATCAGAGGGCTGATGGATT...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGAGGGAGCAATTGCATCTaGTCTTCCGGGTTTGTCAAT +
Preference number: 4 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRGSNCI*SSGFVN
Trigger: ATTGACAAACCCGGAAGATCAGATGCAATTGCTCCC...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCAGTAATTGGGAACATATaGGTTAGAATGGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: SRTVHSGREVVLLISPAPVIGNI*VRMAEI
Trigger: GATCTCAGCCATTCTAACTCATATGTTCCCAATTAC...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCAACGAAAGTAATTATGTaGCATCTGACAGCTACTTCC +
Preference number: 4 (lower is better)
Translates to: SRTVHSGREVVLLISPAPTKVIM*HLTATS
Trigger: GGAAGTAGCTGTCAGATGTCACATAATTACTTTCGT...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACTCATCTGCAGGTTaGCTGGGAACCTGGGATTTT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLHSSAG*LGTWDF
Trigger: AAAATCCCAGGTTCCCAGGCAACCTGCAGATGAGTG...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCTTCGATCTGTGATTTaGCGGAAATGGTTGAGGCCA +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDLRSVI*RKWLRP
Trigger: TGGCCTCAACCATTTCCGGCAAATCACAGATCGAAG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGTCTGTGTCAGCGTCATaGTTGAGAAGTCCATGTTGT +
Preference number: 4 (lower is better)
Translates to: NDLPIQEDAKADVCRKELSVSAS*LRSPCC
Trigger: ACAACATGGACTTCTCAAGCATGACGCTGACACAGA...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACAGTGTAGGTGGAGATaGCTCTGTTCCTTCTTCCCA +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLQCRWR*LCSFFP
Trigger: TGGGAAGAAGGAACAGAGGCATCTCCACCTACACTG...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATCCTATTCAAGAGGATaGCAAGGCAGACGTCTGCAG +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLSYSRG*QGRRLQ
Trigger: CTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTCCGGGTTTGTCAATTaGGTAGAAGGTGGAACGATC +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDSGFVN*VEGGTI
Trigger: GATCGTTCCACCTTCTACGCAATTGACAAACCCGGA...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGACTGCTATGGACGGCTaGATCAGCAGACAATCTAAA +
Preference number: 4 (lower is better)
Translates to: NDLPIQEDAKADVCRKELTAMDG*ISRQSK
Trigger: TTTAGATTGTCTGCTGATGCAGCCGTCCATAGCAGT...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGCTGGGATTTTTGGTGTaGTACTCCATCTTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALLGFLV*YSILVL
Trigger: AAGAACCAAGATGGAGTACCACACCAAAAATCCCAG...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACGGAACCTGGGATTTTTaGTGTGGTACTCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHGTWDF*CGTPSW
Trigger: CCAAGATGGAGTACCACACCAAAAATCCCAGGTTCC...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATAGTCGCTCAATTAAGTaGTCCTTCTCATCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYSRSIK*SFSSLF
Trigger: GAACAAGGATGAGAAGGACCACTTAATTGAGCGACT...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATGCAGCACAACCCGCTaGCTCTCAGTCTTCATGTTT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLCSTTR*LSVFMF
Trigger: AAACATGAAGACTGAGAGCCAGCGGGTTGTGCTGCA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACCATGGACACCTGTTTaGTCACCTCTGCATTCTTCC +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLPWTPV*SPLHSS
Trigger: GGAAGAATGCAGAGGTGACCAAACAGGTGTCCATGG...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACTGGTCTTTGGCAAGCTaGCACATAGATTCCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHWSLAS*HIDSSV
Trigger: CACAGAGGAATCTATGTGCCAGCTTGCCAAAGACCA...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp AGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTTCAGGCAGTTCCTCATaGCTGTGCTGTCGGCATTCT +
Preference number: 4 (lower is better)
Translates to: REVVLLISPAPFKHVIKFSGSSS*LCCRHS
Trigger: AGAATGCCGACAGCACAGCCATGAGGAACTGCCTGA...AAACTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATATCAGCTTTCACCTTaGATGCAGCCACAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLYQLSP*MQPQAG
Trigger: CCCAGCTTGTGGCTGCATCCAAGGTGAAAGCTGATA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTCTTGCAGTGTAGGTaGAGATGCCTCTGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDFLQCR*RCLCSF
Trigger: GAAGGAACAGAGGCATCTCCACCTACACTGCAAGAA...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAGATTTGGCCTGTGGCTaGGGAAATAACACACACGAG +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLDLACG*GNNTHE
Trigger: CTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTCAGCACTGGCCAGCCTaGATGCTAACTAGGGAGGCG +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSQHWPA*MLTREA
Trigger: CGCCTCCCTAGTTAGCATCCAGGCTGGCCAGTGCTG...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTGGAGCATGGACTGGGTaGGCCAGCACTTGGTCAGTG +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSGAWTG*ASTWSV
Trigger: CACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCC...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGAGGTCACTTAAATGCTaGGGTCCATCTAGAAGAGGA +
Preference number: 4 (lower is better)
Translates to: PISSADTSLAQYGGHTSERSLKC*GPSRRG
Trigger: TCCTCTTCTAGATGGACCCCAGCATTTAAGTGACCT...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTGCAATCATCCCGTCTTaGCCTCCCAAAGTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: REVVLLISPAPFKHVIKFAIIPS*PPKVLG
Trigger: TCCCAGAACTTTGGGAGGCCAAGACGGGATGATTGC...AAACTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTGCAGTGGTGCGATCTTaGCTCACTACAACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: REVVLLISPAPFKHVIKFAVVRS*LTTTSV
Trigger: GACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGC...AAACTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAGGACCCGTATTCTGGTaGGATTTTAGGGGTACTGCT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLGPVFW*DFRGTA
Trigger: AGCAGTACCCCTAAAATCCCACCAGAATACGGGTCC...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAGAGGGACCCGTATTCTaGTGGGATTTTAGGGGTACT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLEGPVF*WDFRGT
Trigger: AGTACCCCTAAAATCCCACCAGAATACGGGTCCCTC...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACTTGGAAAGCCAATGTTaGAACTGGAGGCTTTCCCTG +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHLESQC*NWRLSL
Trigger: CAGGGAAAGCCTCCAGTTCCAACATTGGCTTTCCAA...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CCA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCTTTCTATGCTACAGGTaGTGCAGTCTCTGGAGGACA +
Preference number: 4 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVFLCYR*CSLWRT
Trigger: TGTCCTCCAGAGACTGCACCACCTGTAGCATAGAAA...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR CAA 72 bp CCATCTTGTCATGACCCATTTACGCTCACCCGAGACTaGTCACTAGTGATGCTCAGTGACTCATTTAGAAGG +
Preference number: 4 (lower is better)
Translates to: PSCHDPFTLTRD*SLVMLSDSFRR
Trigger: CCTTCTAAATGAGTCACTGAGCATCACTAGTGACAAGTCTCGGGTGAGCGTAAATGGGTCATGACAAGATGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTTCAAATAAATTCTGCTaGGAGGCATCCATGTCCATG +
Preference number: 4 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSSNKFC*EASMSM
Trigger: CATGGACATGGATGCCTCTCAGCAGAATTTATTTGA...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAGGGATCACTGCTGAATaGACTGCCAAAGATGTCATC +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLGITAE*TAKDVI
Trigger: GATGACATCTTTGGCAGTTCATTCAGCAGTGATCCC...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACCGCTGTTCATTGGCTTaGGCTTTCCTTTCTATCTCA +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHRCSLA*AFLSIS
Trigger: TGAGATAGAAAGGAAAGCTCAAGCCAATGAACAGCG...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCTAGCAGCAATTTCATaGGAACACACCATTAGCTCC +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDLAAIS*EHTISS
Trigger: GGAGCTAATGGTGTGTTCTCATGAAATTGCTGCTAG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAAGCTCTCCCAGTTTTTaGCGCTCCTTCTGCAATTCA +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLSSPSF*RSFCNS
Trigger: TGAATTGCAGAAGGAGCGTCAAAAACTGGGAGAGCT...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATAACAAGGATTTACACTaGCATATGGGGTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYNKDLH*HMGCWF
Trigger: AAACCAACACCCCATATGTCAGTGTAAATCCTTGTT...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCTCACACCTGAAGTTCTaGTTGCTCCAAGCATCTCTT +
Preference number: 4 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVSHLKF*LLQASL
Trigger: AAGAGATGCTTGGAGCAATCAGAACTTCAGGTGTGA...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR TCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAGGGGTTGGTTCACAGTaGTCAAACAGAAGTCTCACA +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLGVGSQ*SNRSLT
Trigger: TGTGAGACTTCTGTTTGATCACTGTGAACCAACCCC...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGACACTTTTGGAAATGTTaGCCCGCATCAAGAACACAC +
Preference number: 4 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRHFWKC*PASRTH
Trigger: GTGTGTTCTTGATGCGGGTCAACATTTCCAAAAGTG...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGACGAAAGTAATTATGTaGCATCTGACAGCTACTTCC +
Preference number: 4 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALTKVIM*HLTATS
Trigger: GGAAGTAGCTGTCAGATGTCACATAATTACTTTCGT...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACCTTGTGGCAAGTTCCTaGTTCAAGCTCTCTAGAACT +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHLVASS*FKLSRT
Trigger: AGTTCTAGAGAGCTTGAAGCAGGAACTTGCCACAAG...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACTCTGTGTCAGCGTCATaGTTGAGAAGTCCATGTTGT +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHSVSAS*LRSPCC
Trigger: ACAACATGGACTTCTCAAGCATGACGCTGACACAGA...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTTTGTAGGCTGTTGCTaGTTAAGGGAGGTTAGTAAT +
Preference number: 4 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHFVGCC*LREVSN
Trigger: ATTACTAACCTCCCTTAAGCAGCAACAGCCTACAAA...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCCTCTTTGTAGGCTGTTaGTGCTTAAGGGAGGTTAGT +
Preference number: 4 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVLFVGC*CLREVS
Trigger: ACTAACCTCCCTTAAGCAGCAACAGCCTACAAAGAG...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR GCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGAGAAGGTCACTTAAATaGTGGGGTCCATCTAGAAGA +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKRRSLK*WGPSRR
Trigger: TCTTCTAGATGGACCCCAGCATTTAAGTGACCTTCT...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACACTGCTATGGACGGCTaGATCAGCAGACAATCTAAA +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHTAMDG*ISRQSK
Trigger: TTTAGATTGTCTGCTGATGCAGCCGTCCATAGCAGT...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTCAGCACCTTGGGCAGTaGGTTGGGCACCTGCTTCAT +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSQHLGQ*VGHLLH
Trigger: ATGAAGCAGGTGCCCAACCCACTGCCCAAGGTGCTG...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCCAGTATGCACGTTCTaGCGTGTTTTTCCTTTACAG +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDPVCTF*RVFPLQ
Trigger: CTGTAAAGGAAAAACACGCCAGAACGTGCATACTGG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGTGTGGTACTCCATCTTaGTTCTTAGCAGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: NDLPIQEDAKADVCRKELCGTPS*FLAVSG
Trigger: ACCTGAAACTGCTAAGAACCAAGATGGAGTACCACA...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGTGTGGTACTCCATCTTaGTTCTTAGCAGTTTCAGGT +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKCGTPS*FLAVSG
Trigger: ACCTGAAACTGCTAAGAACCAAGATGGAGTACCACA...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTAGTCGCTCAATTAAGTaGTCCTTCTCATCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSSRSIK*SFSSLF
Trigger: GAACAAGGATGAGAAGGACCACTTAATTGAGCGACT...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACAGAAGCATTTTTCGTTaGTCTTTGGCAAGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHRSIFR*SLASWH
Trigger: GTGCCAGCTTGCCAAAGACCAACGAAAAATGCTTCT...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp AGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTTATCAGCTTTCACCTTaGATGCAGCCACAAGCTGGG +
Preference number: 4 (lower is better)
Translates to: REVVLLISPAPFKHVIKFYQLSP*MQPQAG
Trigger: CCCAGCTTGTGGCTGCATCCAAGGTGAAAGCTGATA...AAACTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTGAAAGGGTGTCGCTATaGAGGGAGTCTTTGGAAGTG +
Preference number: 4 (lower is better)
Translates to: REVVLLISPAPFKHVIKFERVSL*RESLEV
Trigger: CACTTCCAAAGACTCCCTCCATAGCGACACCCTTTC...AAACTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATCAATTGCGTAGAAGGTaGAACGATCTTCCTATTCAA +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYQLRRR*NDLPIQ
Trigger: TTGAATAGGAAGATCGTTCCACCTTCTACGCAATTG...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCCTAGCAATATTCTGTTaGAGCAGATCCTGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVLAIFC*SRSWEV
Trigger: CACTTCCCAGGATCTGCTCCAACAGAATATTGCTAG...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACCTAGCAATATTCTGTTaGAGCAGATCCTGGGAAGTG +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHLAIFC*SRSWEV
Trigger: CACTTCCCAGGATCTGCTCCAACAGAATATTGCTAG...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTAGCCTCCTGAGTAGCTaGGATTACGGGCACCCGTCA +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSSLLSS*DYGHPS
Trigger: TGACGGGTGCCCGTAATCCCAGCTACTCAGGAGGCT...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATATAACCCTGCCAAGATaGCTCTTCTCTTCTATTTCT +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYITLPR*LFSSIS
Trigger: AGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTAT...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCAAAGCCAGTTTGCTTaGAAAGCCAATGTTGGAACT +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKQSQFA*KANVGT
Trigger: AGTTCCAACATTGGCTTTCCAAGCAAACTGGCTTTG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
3UTR CAA 72 bp TGGGAGCAATTGCATCTGATCTTCCGGGTTTGTCAATaGCGTAGAAGGTGGAACGATCTTCCTATTCAAGAG +
Preference number: 4 (lower is better)
Translates to: WEQLHLIFRVCQ*RRRWNDLPIQE
Trigger: CTCTTGAATAGGAAGATCGTTCCACCTTCTACGCAATTGACAAACCCGGAAGATCAGATGCAATTGCTCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAACATGTCCAGGGAGTTaGATACTGTTTGGAAGAGGT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLTCPGS*ILFGRG
Trigger: ACCTCTTCCAAACAGTATTCAACTCCCTGGACATGT...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTCAAATAAATTCTGCTaGGAGGCATCCATGTCCATG +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDSNKFC*EASMSM
Trigger: CATGGACATGGATGCCTCTCAGCAGAATTTATTTGA...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATTTGTTCACACCATTTTaGCTGTTGAAATTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYLFTPF*LLKLKG
Trigger: TCCCTTCAATTTCAACAGTCAAAATGGTGTGAACAA...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACTAGCAGCAATTTCATaGGAACACACCATTAGCTCC +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLLAAIS*EHTISS
Trigger: GGAGCTAATGGTGTGTTCTCATGAAATTGCTGCTAG...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTAGCCGGGCAGAAAGATaGGCCTTGCTAGAGTCACAC +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSSRAER*ALLESH
Trigger: GTGTGACTCTAGCAAGGCTCATCTTTCTGCCCGGCT...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTCTGGTCTTGAACTCCTaGCCTCAGGTGATCCTACCA +
Preference number: 4 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSLVLNS*PQVILP
Trigger: TGGTAGGATCACCTGAGGTCAGGAGTTCAAGACCAG...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTTGTCCCATCTTGTCATaGCCCATTTACGCTCACCCG +
Preference number: 4 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSCPILS*PIYAHP
Trigger: CGGGTGAGCGTAAATGGGTCATGACAAGATGGGACA...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp AGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTGTCGATCCTAAGCCATaGTTTTGTTGCTGTCCCATC +
Preference number: 4 (lower is better)
Translates to: REVVLLISPAPFKHVIKFVDPKP*FCCCPI
Trigger: GATGGGACAGCAACAAAATCATGGCTTAGGATCGAC...AAACTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACCGAACCCAACAGCATTaGATTGTTTCCTGTTGCTTT +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHRTQQH*IVSCCF
Trigger: AAAGCAACAGGAAACAATTCAATGCTGTTGGGTTCG...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR TCA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCCTCGGTTTGTCCCTATaGGTGGTAATCAGTTTCATT +
Preference number: 4 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVLGLSL*VVISFI
Trigger: AATGAAACTGATTACCACTCATAGGGACAAACCGAG...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR GCA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGTTTACAGCCACTTCCTaGGTATTAATGGCCTTATTG +
Preference number: 4 (lower is better)
Translates to: NDLPIQEDAKADVCRKELFTATS*VLMALL
Trigger: CAATAAGGCCATTAATACGCAGGAAGTGGCTGTAAA...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACTCTTTGTAGGCTGTTaGTGCTTAAGGGAGGTTAGT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLLFVGC*CLREVS
Trigger: ACTAACCTCCCTTAAGCAGCAACAGCCTACAAAGAG...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGAGTTCCAAGAAAAGTTaGTCTAGACAGTGGTTCTTC +
Preference number: 4 (lower is better)
Translates to: PISSADTSLAQYGGHTSESSKKS*SRQWFF
Trigger: GAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACT...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTGCCCCTTTCTCATGGTaGGTGCCCAGTATGCACGTT +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSAPFSW*VPSMHV
Trigger: AACGTGCATACTGGGCACCCACCATGAGAAAGGGGC...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCTGGGATTTTTGGTGTaGTACTCCATCTTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDLGFLV*YSILVL
Trigger: AAGAACCAAGATGGAGTACCACACCAAAAATCCCAG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTCTACCTGGGCTTGTCTaGCCATGGACACCTGTTTGG +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSLPGLV*PWTPVW
Trigger: CCAAACAGGTGTCCATGGCCAGACAAGCCCAGGTAG...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAAGCAGGGTTATGGAATaGAGAAGTCCACTGATGTCT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLSRVME*RSPLMS
Trigger: AGACATCAGTGGACTTCTCCATTCCATAACCCTGCT...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTGATGCAGCCACAAGCTaGGCTGTGCTAGCAGCAATT +
Preference number: 4 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSDAATS*AVLAAI
Trigger: AATTGCTGCTAGCACAGCCCAGCTTGTGGCTGCATC...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTGCAGCTGGGCTAGGTTaGGGCTGTCCTTATCAGCTT +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSAAGLG*GCPYQL
Trigger: AAGCTGATAAGGACAGCCCCAACCTAGCCCAGCTGC...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGATTTACACTGACATATaGGGTGTTGGTTTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKIYTDI*GVGLAL
Trigger: TAGAGCCAAACCAACACCCCATATGTCAGTGTAAAT...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTGAGGAAAAGTGCTGTTaGGCTGCCCATCCCTGGCAA +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSEEKCC*AAHPWQ
Trigger: TTGCCAGGGATGGGCAGCCCAACAGCACTTTTCCTC...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGTTGTTCACACCATTTTaGCTGTTGAAATTGAAGGGA +
Preference number: 4 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKLFTPF*LLKLKG
Trigger: TCCCTTCAATTTCAACAGTCAAAATGGTGTGAACAA...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTAGCTGGAAATGGATGTaGCCGTGGAGAGGAGGTGAT +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSSWKWM*PWRGGD
Trigger: ATCACCTCCTCTCCACGGTCACATCCATTTCCAGCT...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACAACAAGGATTTACACTaGCATATGGGGTGTTGGTTT +
Preference number: 4 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHNKDLH*HMGCWF
Trigger: AAACCAACACCCCATATGTCAGTGTAAATCCTTGTT...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR TCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTAGCGACATGTACCTGTaGTTCCCGTGTTACCTGGTG +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSSDMYL*FPCYLV
Trigger: CACCAGGTAACACGGGAATCACAGGTACATGTCGCT...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTTACAGCCACTTCCTaGGTATTAATGGCCTTATTG +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDFTATS*VLMALL
Trigger: CAATAAGGCCATTAATACGCAGGAAGTGGCTGTAAA...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR GCA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCACTTCTCCTTTAGCTTaGTATATCGCTGTTCATTGG +
Preference number: 4 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVTSPLA*YIAVHW
Trigger: CCAATGAACAGCGATATAGCAAGCTAAAGGAGAAGT...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR GCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTGTTTCCCTGCCATACTaGTTACAGGCCTCGGTCAGT +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSVSLPY*LQASVS
Trigger: ACTGACCGAGGCCTGTAAGCAGTATGGCAGGGAAAC...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTGCAGATCCTGGGAAGTaGTTGATGGCTACCACCAAT +
Preference number: 4 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSADPGK*LMATTN
Trigger: ATTGGTGGTAGCCATCAAGCACTTCCCAGGATCTGC...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACTGGGATTTTTGGTGTaGTACTCCATCTTGGTTCTT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLLGFLV*YSILVL
Trigger: AAGAACCAAGATGGAGTACCACACCAAAAATCCCAG...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAAGTCGCTCAATTAAGTaGTCCTTCTCATCCTTGTTC +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLSRSIK*SFSSLF
Trigger: GAACAAGGATGAGAAGGACCACTTAATTGAGCGACT...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGTATATCGCTGTTCATTaGCTTGAGCTTTCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: PISSADTSLAQYGGHTSEYIAVH*LELSFL
Trigger: TAGAAAGGAAAGCTCAAGCCAATGAACAGCGATATA...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATATTTACACTGACATATaGGGTGTTGGTTTGGCTCTA +
Preference number: 4 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDIYTDI*GVGLAL
Trigger: TAGAGCCAAACCAACACCCCATATGTCAGTGTAAAT...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTTCCCGTGTTACCTGGTaGCATAAACCTTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSSRVTW*HKPWCL
Trigger: CAGACACCAAGGTTTATGCCACCAGGTAACACGGGA...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTTCTCCTTCTGCTTTTTaGGGAAAGCTGTCACTCAGC +
Preference number: 4 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSSPSAF*GKLSLS
Trigger: GCTGAGTGACAGCTTTCCTCAAAAAGCAGAAGGAGA...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTCACTCATCTGCAGGTTaGCTGGGAACCTGGGATTTT +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSHSSAG*LGTWDF
Trigger: AAAATCCCAGGTTCCCAGGCAACCTGCAGATGAGTG...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR GCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAACTTCTCCTTTAGCTTaGTATATCGCTGTTCATTGG +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLTSPLA*YIAVHW
Trigger: CCAATGAACAGCGATATAGCAAGCTAAAGGAGAAGT...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAGAGTTGAATACTGTTTaGAAGAGGTTGAGTTCACAC +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLELNTV*KRLSSH
Trigger: GTGTGAACTCAACCTCTTCCAAACAGTATTCAACTC...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTGGAGGTTCTTCAAGCTaGTTCAGGGCGTCTTGTATC +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSGGSSS*FRASCI
Trigger: GATACAAGACGCCCTGAACCAGCTTGAAGAACCTCC...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATATGGGGTGTTGGTTTaGCTCTATTCTTTTTCGGTT +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLYGVLV*LYSFSV
Trigger: AACCGAAAAAGAATAGAGCCAAACCAACACCCCATA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTAGTTGCTCTAGACAGTaGTTCTTCCAGCCACTGGGT +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSSCSRQ*FFQPLG
Trigger: ACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACT...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
3UTR CAA 72 bp TGGAAAAATCTACTCTCAGAATCGAACCCAACAGCATaGAATTGTTTCCTGTTGCTTTGGCTCCTGACAACA +
Preference number: 4 (lower is better)
Translates to: WKNLLSESNPTA*NCFLLLWLLTT
Trigger: TGTTGTCAGGAGCCAAAGCAACAGGAAACAATTCAATGCTGTTGGGTTCGATTCTGAGAGTAGATTTTTCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR TCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTGTGCCTTCAATCCACTaGTCTCTCTGTATAGTCGCT +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSVPSIH*SLCIVA
Trigger: AGCGACTATACAGAGAGATCAGTGGATTGAAGGCAC...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTTCTCCTTCTGCTTTTTaGGGAAAGCTGTCACTCAGC +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSSPSAF*GKLSLS
Trigger: GCTGAGTGACAGCTTTCCTCAAAAAGCAGAAGGAGA...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR TCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTATAAACCTTGGTGTCTaGCTTGGTAGCTGGGACAGT +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSINLGV*LGSWDS
Trigger: ACTGTCCCAGCTACCAAGTCAGACACCAAGGTTTAT...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTGGAACCTGGGATTTTTaGTGTGGTACTCCATCTTGG +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSGTWDF*CGTPSW
Trigger: CCAAGATGGAGTACCACACCAAAAATCCCAGGTTCC...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CCA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATATATCGCTGTTCATTaGCTTGAGCTTTCCTTTCTA +
Preference number: 4 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLYIAVH*LELSFL
Trigger: TAGAAAGGAAAGCTCAAGCCAATGAACAGCGATATA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTTATTTGGTCTGGACCTaGGAGAGGAAGGAATTTGGC +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSYLVWT*ERKEFG
Trigger: GCCAAATTCCTTCCTCTCCCAGGTCCAGACCAAATA...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR TCA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTGTAATTGGGAACATATaGGTTAGAATGGCTGAGATC +
Preference number: 4 (lower is better)
Translates to: YKITLPRWLFSSISFSLSVIGNI*VRMAEI
Trigger: GATCTCAGCCATTCTAACTCATATGTTCCCAATTAC...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS GCA 90 bp CCGACCCCGCGCCGGCTCAGCACCTTGGGCAGTGGGTTGGGCACCTaGTTCATGGAGCTGGCCATCCGATCCATGTCGCCGCGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: PTPRRLSTLGSGLGT*FMELAIRSMSPRGA
Trigger: GGCTCCTCGCGGCGACATGGATCGGATGGCCAGCTCCATGAAGCAGGTGCCCAACCCACTGCCCAAGGTGCTGAGCCGGCGCGGGGTCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000479835.1
CDS GCA 90 bp GCCCGCAGGAATTCACAGTCGTCGGCCGCCTGCTGCCGCAGGTGCTaGTGCTCGGCCAGATCTGCTTCCAGCTCGCTGACGTGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: ARRNSQSSAACCRRC*CSARSASSSLTWPF
Trigger: GAAGGGCCACGTCAGCGAGCTGGAAGCAGATCTGGCCGAGCAGCAGCACCTGCGGCAGCAGGCGGCCGACGACTGTGAATTCCTGCGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000404944.3
ENST00000434438.6
ENST00000616821.4
CDS GCA 90 bp TCTGCCCGCAGGAATTCACAGTCGTCGGCCGCCTGCTGCCGCAGGTaGTGCTGCTCGGCCAGATCTGCTTCCAGCTCGCTGACGTGGCCC +
Preference number: 5 (lower is better)
Translates to: SARRNSQSSAACCRR*CCSARSASSSLTWP
Trigger: GGGCCACGTCAGCGAGCTGGAAGCAGATCTGGCCGAGCAGCAGCACCTGCGGCAGCAGGCGGCCGACGACTGTGAATTCCTGCGGGCAGA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000404944.3
ENST00000434438.6
ENST00000616821.4
CDS CCA 90 bp GGCTCAGCACCTTGGGCAGTGGGTTGGGCACCTGCTTCATGGAGCTaGCCATCCGATCCATGTCGCCGCGAGGAGCCGAGTCAGGGGCCC +
Preference number: 5 (lower is better)
Translates to: GSAPWAVGWAPASWS*PSDPCRREEPSQGP
Trigger: GGGCCCCTGACTCGGCTCCTCGCGGCGACATGGATCGGATGGCCAGCTCCATGAAGCAGGTGCCCAACCCACTGCCCAAGGTGCTGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479835.1
CDS CCA 90 bp CGCGCCGGCTCAGCACCTTGGGCAGTGGGTTGGGCACCTGCTTCATaGAGCTGGCCATCCGATCCATGTCGCCGCGAGGAGCCGAGTCAG +
Preference number: 5 (lower is better)
Translates to: RAGSAPWAVGWAPAS*SWPSDPCRREEPSQ
Trigger: CTGACTCGGCTCCTCGCGGCGACATGGATCGGATGGCCAGCTCCATGAAGCAGGTGCCCAACCCACTGCCCAAGGTGCTGAGCCGGCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479835.1
CDS GCA 90 bp CGCAGGAATTCACAGTCGTCGGCCGCCTGCTGCCGCAGGTGCTGCTaGTCGGCCAGATCTGCTTCCAGCTCGCTGACGTGGCCCTTCAGC +
Preference number: 5 (lower is better)
Translates to: RRNSQSSAACCRRCC*SARSASSSLTWPFS
Trigger: GCTGAAGGGCCACGTCAGCGAGCTGGAAGCAGATCTGGCCGAGCAGCAGCACCTGCGGCAGCAGGCGGCCGACGACTGTGAATTCCTGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000404944.3
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGACGCCGGCTCAGCACCTaGGGCAGTGGGTTGGGCACC +
Preference number: 5 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRRRLST*GSGLGT
Trigger: GGTGCCCAACCCACTGCCCAAGGTGCTGAGCCGGCG...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS TCA 90 bp GCTGCCGCAGGTGCTGCTGCTCGGCCAGATCTGCTTCCAGCTCGCTaGCGTGGCCCTTCAGCTGCAGCACAACCCGCTGGCTCTCAGTCT +
Preference number: 5 (lower is better)
Translates to: AAAGAAARPDLLPAR*RGPSAAAQPAGSQS
Trigger: AGACTGAGAGCCAGCGGGTTGTGCTGCAGCTGAAGGGCCACGTCAGCGAGCTGGAAGCAGATCTGGCCGAGCAGCAGCACCTGCGGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000404944.3
ENST00000434438.6
ENST00000616821.4
CDS GCA 90 bp AGCTCGTCCAGTTCTGCCCGCAGGAATTCACAGTCGTCGGCCGCCTaGTGCCGCAGGTGCTGCTGCTCGGCCAGATCTGCTTCCAGCTCG +
Preference number: 5 (lower is better)
Translates to: SSSSSARRNSQSSAA*CRRCCCSARSASSS
Trigger: CGAGCTGGAAGCAGATCTGGCCGAGCAGCAGCACCTGCGGCAGCAGGCGGCCGACGACTGTGAATTCCTGCGGGCAGAACTGGACGAGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000404944.3
ENST00000434438.6
ENST00000616821.4
CDS TCA 90 bp CCAAGCCGTGTCTCCCCTGAAAGGGTGGCATTGTCCACCACTTCCTaGCCCAGCAGGCCCTCGTGTCCCCGGCTGGTTCCGGAGAGCCAA +
Preference number: 5 (lower is better)
Translates to: PSRVSPERVALSTTS*PSRPSCPRLVPESQ
Trigger: TTGGCTCTCCGGAACCAGCCGGGGACACGAGGGCCTGCTGGGTCAGGAAGTGGTGGACAATGCCACCCTTTCAGGGGAGACACGGCTTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420909.1
CDS GCA 90 bp GAGGCCACAACGCCGGCAGTGGCCTGGTTCACTCCCCGAGAGGCCTaGTGCAGCTGGGCTAGGTTGGGGCTGTCCTTATCAGCTTTCACC +
Preference number: 5 (lower is better)
Translates to: EATTPAVAWFTPREA*CSWARLGLSLSAFT
Trigger: GGTGAAAGCTGATAAGGACAGCCCCAACCTAGCCCAGCTGCAGCAGGCCTCTCGGGGAGTGAACCAGGCCACTGCCGGCGTTGTGGCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS TCA 90 bp GAGTCGGCAGGCTCAGGTGGGGCTCTGAGGCAGGTGGTGGCACCATaGGCAATGGCGTCGCTGGTCAAGTGGGCCAGCAGGGTTATGGAA +
Preference number: 5 (lower is better)
Translates to: ESAGSGGALRQVVAP*AMASLVKWASRVME
Trigger: TTCCATAACCCTGCTGGCCCACTTGACCAGCGACGCCATTGCTCATGGTGCCACCACCTGCCTCAGAGCCCCACCTGAGCCTGCCGACTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS GCA 90 bp GCCACAACGCCGGCAGTGGCCTGGTTCACTCCCCGAGAGGCCTGCTaGAGCTGGGCTAGGTTGGGGCTGTCCTTATCAGCTTTCACCTTG +
Preference number: 5 (lower is better)
Translates to: ATTPAVAWFTPREAC*SWARLGLSLSAFTL
Trigger: CAAGGTGAAAGCTGATAAGGACAGCCCCAACCTAGCCCAGCTGCAGCAGGCCTCTCGGGGAGTGAACCAGGCCACTGCCGGCGTTGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS CCA 90 bp CGCAGGTGCTGCTGCTCGGCCAGATCTGCTTCCAGCTCGCTGACGTaGCCCTTCAGCTGCAGCACAACCCGCTGGCTCTCAGTCTTCATG +
Preference number: 5 (lower is better)
Translates to: RRCCCSARSASSSLT*PFSCSTTRWLSVFM
Trigger: CATGAAGACTGAGAGCCAGCGGGTTGTGCTGCAGCTGAAGGGCCACGTCAGCGAGCTGGAAGCAGATCTGGCCGAGCAGCAGCACCTGCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000404944.3
ENST00000434438.6
ENST00000616821.4
CDS CCA 90 bp TGTGATTTGCCGGAAATGGTTGAGGCCACAACGCCGGCAGTGGCCTaGTTCACTCCCCGAGAGGCCTGCTGCAGCTGGGCTAGGTTGGGG +
Preference number: 5 (lower is better)
Translates to: CDLPEMVEATTPAVA*FTPREACCSWARLG
Trigger: CCCCAACCTAGCCCAGCTGCAGCAGGCCTCTCGGGGAGTGAACCAGGCCACTGCCGGCGTTGTGGCCTCAACCATTTCCGGCAAATCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATCAGCAGAGCACTGCGTaGCTAGACAGAGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDQQSTA*LDRGRR
Trigger: CCGCCTGCCTCTGTCTAGCAACGCAGTGCTCTGCTG...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTCTGGTTCAGGGCGTCTaGTATCACCTGCTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: CPLSSSCPQGSESLGHVALVQGV*YHLLRS
Trigger: GCTGCGGAGCAGGTGATACAAGACGCCCTGAACCAG...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS GCA 90 bp GATGGATTGGGTGGGGAACACACCAAGGGTCTGGTTGGAGATGGGTaGAGTGGCTGGGCCATGAGGCAGGTCAGTGGTGCCTCCTCTGGC +
Preference number: 5 (lower is better)
Translates to: DGLGGEHTKGLVGDG*SGWAMRQVSGASSG
Trigger: GCCAGAGGAGGCACCACTGACCTGCCTCATGGCCCAGCCACTGCACCCATCTCCAACCAGACCCTTGGTGTGTTCCCCACCCAATCCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000479835.1
CDS CCA 90 bp ACGCCGGCAGTGGCCTGGTTCACTCCCCGAGAGGCCTGCTGCAGCTaGGCTAGGTTGGGGCTGTCCTTATCAGCTTTCACCTTGGATGCA +
Preference number: 5 (lower is better)
Translates to: TPAVAWFTPREACCS*ARLGLSLSAFTLDA
Trigger: TGCATCCAAGGTGAAAGCTGATAAGGACAGCCCCAACCTAGCCCAGCTGCAGCAGGCCTCTCGGGGAGTGAACCAGGCCACTGCCGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS CCA 90 bp CGATCTGTGATTTGCCGGAAATGGTTGAGGCCACAACGCCGGCAGTaGCCTGGTTCACTCCCCGAGAGGCCTGCTGCAGCTGGGCTAGGT +
Preference number: 5 (lower is better)
Translates to: RSVICRKWLRPQRRQ*PGSLPERPAAAGLG
Trigger: ACCTAGCCCAGCTGCAGCAGGCCTCTCGGGGAGTGAACCAGGCCACTGCCGGCGTTGTGGCCTCAACCATTTCCGGCAAATCACAGATCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCCGCCGGCTCAGCACCTaGGGCAGTGGGTTGGGCACC +
Preference number: 5 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLIRRLST*GSGLGT
Trigger: GGTGCCCAACCCACTGCCCAAGGTGCTGAGCCGGCG...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTCCCAGCTCCTCCTGCTaGATGTCCAGTCCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: QAVHVPSVLILSTGQREPPSSSC*MSSPLG
Trigger: GCCCAGGGGACTGGACATCAAGCAGGAGGAGCTGGG...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTGAAGCTCCCGTTGGCTaGTGGCAAGTTCCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: CPLSSSCPQGSESLGHVAEAPVG*WQVPAS
Trigger: TGAAGCAGGAACTTGCCACAAGCCAACGGGAGCTTC...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATACTCGGCTGCCCAGTTaGCTTCTGACTGGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDTRLPS*LLTGQK
Trigger: CTTCTGCCCAGTCAGAAGCAAACTGGGCAGCCGAGT...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp CGCCTGACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCACCTTGGTGTCTGACTaGGTAGCTGGGACAGTTCCA +
Preference number: 5 (lower is better)
Translates to: RLTLEHGLGGPALGQCGGTLVSD*VAGTVP
Trigger: TGGAACTGTCCCAGCTACCAAGTCAGACACCAAGGT...GCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGTCAGGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS CCA 90 bp TGGCCTGGTTCACTCCCCGAGAGGCCTGCTGCAGCTGGGCTAGGTTaGGGCTGTCCTTATCAGCTTTCACCTTGGATGCAGCCACAAGCT +
Preference number: 5 (lower is better)
Translates to: WPGSLPERPAAAGLG*GCPYQLSPWMQPQA
Trigger: AGCTTGTGGCTGCATCCAAGGTGAAAGCTGATAAGGACAGCCCCAACCTAGCCCAGCTGCAGCAGGCCTCTCGGGGAGTGAACCAGGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCAGGGAACCTGGGATTTTaGGTGTGGTACTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: GQHLVSVEAEMEHREAWAGNLGF*VWYSIL
Trigger: CAAGATGGAGTACCACACCAAAAATCCCAGGTTCCC...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCAGCGGTCCCGGTGGCCTaGCAGGGTGTCAGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SRTVHSGREVVLLISPAPAVPVA*QGVSWE
Trigger: CTCCCAGCTGACACCCTGCAAGGCCACCGGGACCGC...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGACAAATCTACCTGGGCTaGTCTGGCCATGGACACCTG +
Preference number: 5 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRQIYLG*SGHGHL
Trigger: CAGGTGTCCATGGCCAGACAAGCCCAGGTAGATTTG...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGAAGCTCCCGTTGGCTaGTGGCAAGTTCCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDEAPVG*WQVPAS
Trigger: TGAAGCAGGAACTTGCCACAAGCCAACGGGAGCTTC...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCATCTCCTGCTCGGGATTaGCTGAGCATCTCCTCTATT +
Preference number: 5 (lower is better)
Translates to: GQHLVSVEAEMEHREAWASPARD*LSISSI
Trigger: AATAGAGGAGATGCTCAGCAAATCCCGAGCAGGAGA...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CAA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGAAGGGGGAGAATGGCTTaGGCATTCACAGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRRGRMA*AFTART
Trigger: TGTCCTGGCTGTGAATGCCAAAGCCATTCTCCCCCT...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTACGCTCACCCGAGACTaGTCACTAGTGATGCTCAGT +
Preference number: 5 (lower is better)
Translates to: CPLSSSCPQGSESLGHVATLTRD*SLVMLS
Trigger: ACTGAGCATCACTAGTGACAAGTCTCGGGTGAGCGT...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGGAGAGGAAGGAATTaGGCAGCAAACAGCTGGCTG +
Preference number: 5 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDGRGRN*AANSWL
Trigger: CAGCCAGCTGTTTGCTGCCAAATTCCTTCCTCTCCC...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CAA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGCCATGGACACCTGTTaGGTCACCTCTGCATTCTTC +
Preference number: 5 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDAMDTC*VTSAFF
Trigger: GAAGAATGCAGAGGTGACCAAACAGGTGTCCATGGC...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGAGATCCTGGGAAGTGCTaGATGGCTACCACCAATGAG +
Preference number: 5 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRDPGKC*MATTNE
Trigger: CTCATTGGTGGTAGCCATCAAGCACTTCCCAGGATC...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS GCA 90 bp GTTGCTAGACAGAGGCAGGCGGTTGACAACAGACCAGAAGGTCTGTaGCCCTTTCTCATGGTGGGTGCCCAGTATGCACGTTCTGGCGTG +
Preference number: 5 (lower is better)
Translates to: VARQRQAVDNRPEGL*PFLMVGAQYARSGV
Trigger: CACGCCAGAACGTGCATACTGGGCACCCACCATGAGAAAGGGGCACAGACCTTCTGGTCTGTTGTCAACCGCCTGCCTCTGTCTAGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000420909.1
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTAAATTTCCCTCTGCCTaGTACCACCAGATCAGCTGC +
Preference number: 5 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLKFPSA*YHQISC
Trigger: GCAGCTGATCTGGTGGTACAAGGCAGAGGGAAATTT...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGAGTGTCAGCGTCATGCTaGAGAAGTCCATGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRVSASC*RSPCCL
Trigger: CAGACAACATGGACTTCTCAAGCATGACGCTGACAC...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTTCCATCTCTTGGCGTTaGATCTGTGTCAGCGTCATG +
Preference number: 5 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLSISWR*ICVSVM
Trigger: CATGACGCTGACACAGATCAAACGCCAAGAGATGGA...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS TCA 90 bp GTGTCCTGCAGTTCTTTCCGAAGAGCAGATAATTCCTCCTCCCTATaGGCTGCGCCACTCACCAGGCTGTCCCGCTCCTTCTCTAGCTCG +
Preference number: 5 (lower is better)
Translates to: VSCSSFRRADNSSSL*AAPLTRLSRSFSSS
Trigger: CGAGCTAGAGAAGGAGCGGGACAGCCTGGTGAGTGGCGCAGCTCATAGGGAGGAGGAATTATCTGCTCTTCGGAAAGAACTGCAGGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS GCA 90 bp TGGTGTGGTACTCCATCTTGGTTCTTAGCAGTTTCAGGTAGATGCTaGACAGCTGGCCATACCCCTCGCTCAGGTGGCCCCACATCCTGC +
Preference number: 5 (lower is better)
Translates to: WCGTPSWFLAVSGRC*TAGHTPRSGGPTSC
Trigger: GCAGGATGTGGGGCCACCTGAGCGAGGGGTATGGCCAGCTGTGCAGCATCTACCTGAAACTGCTAAGAACCAAGATGGAGTACCACACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000420909.1
ENST00000434438.6
ENST00000616821.4
CDS CCA 90 bp CAAGCTGGTTCAGGGCGTCTTGTATCACCTGCTCCGCAGCCTTCCTaGACCCCACCAGAAGCATTTTTCGTTGGTCTTTGGCAAGCTGGC +
Preference number: 5 (lower is better)
Translates to: QAGSGRLVSPAPQPS*TPPEAFFVGLWQAG
Trigger: GCCAGCTTGCCAAAGACCAACGAAAAATGCTTCTGGTGGGGTCCAGGAAGGCTGCGGAGCAGGTGATACAAGACGCCCTGAACCAGCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGAGACATGTCCAGGGAGTaGAATACTGTTTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRDMSRE*NTVWKR
Trigger: CCTCTTCCAAACAGTATTCAACTCCCTGGACATGTC...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCGCGGTCCCGGTGGCCTaGCAGGGTGTCAGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVAVPVA*QGVSWE
Trigger: CTCCCAGCTGACACCCTGCAAGGCCACCGGGACCGC...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CAA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACGCGGTCCCGGTGGCCTaGCAGGGTGTCAGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHAVPVA*QGVSWE
Trigger: CTCCCAGCTGACACCCTGCAAGGCCACCGGGACCGC...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGGCCATGGACACCTGTTaGGTCACCTCTGCATTCTTC +
Preference number: 5 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGAMDTC*VTSAFF
Trigger: GAAGAATGCAGAGGTGACCAAACAGGTGTCCATGGC...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATCCCAGCTCCTCCTGCTaGATGTCCAGTCCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYPSSSC*MSSPLG
Trigger: GCCCAGGGGACTGGACATCAAGCAGGAGGAGCTGGG...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATCTGAGAATCCATCTCTaGGCGTTTGATCTGTGTCAG +
Preference number: 5 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDLRIHL*AFDLCQ
Trigger: CTGACACAGATCAAACGCCAAGAGATGGATTCTCAG...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGCAAAGCCAGTTTGCTaGGAAAGCCAATGTTGGAAC +
Preference number: 5 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDAKPVC*ESQCWN
Trigger: GTTCCAACATTGGCTTTCCAAGCAAACTGGCTTTGC...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS TCA 90 bp ATGCTGACAGTCTCTGGAGGGGGCTCTGGGTTAGGGAACATCATCTaGGAACAGGCTGTTCTCTGGACTTCCCTGGAGTCACACAGGACC +
Preference number: 5 (lower is better)
Translates to: MLTVSGGGSGLGNII*EQAVLWTSLESHRT
Trigger: GGTCCTGTGTGACTCCAGGGAAGTCCAGAGAACAGCCTGTTCTCAGATGATGTTCCCTAACCCAGAGCCCCCTCCAGAGACTGTCAGCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420909.1
CDS GCA 90 bp TTCACGTCACTTTCTCCAGCCTCGTCCAGCTGGCGGTCACTCATCTaGAGGTTGCCTGGGAACCTGGGATTTTTGGTGTGGTACTCCATC +
Preference number: 5 (lower is better)
Translates to: FTSLSPASSSWRSLI*RLPGNLGFLVWYSI
Trigger: GATGGAGTACCACACCAAAAATCCCAGGTTCCCAGGCAACCTGCAGATGAGTGACCGCCAGCTGGACGAGGCTGGAGAAAGTGACGTGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS CCA 90 bp AGAAGTCCATGTTGTCTGTCTCTTCGATCTGTGATTTGCCGGAAATaGTTGAGGCCACAACGCCGGCAGTGGCCTGGTTCACTCCCCGAG +
Preference number: 5 (lower is better)
Translates to: RSPCCLSLRSVICRK*LRPQRRQWPGSLPE
Trigger: CTCGGGGAGTGAACCAGGCCACTGCCGGCGTTGTGGCCTCAACCATTTCCGGCAAATCACAGATCGAAGAGACAGACAACATGGACTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTATTTTTCGTTGGTCTTaGGCAAGCTGGCACATAGAT +
Preference number: 5 (lower is better)
Translates to: CPLSSSCPQGSESLGHVAIFRWS*ASWHID
Trigger: ATCTATGTGCCAGCTTGCCAAAGACCAACGAAAAAT...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTTTATCAGCTTTCACCTaGGATGCAGCCACAAGCTGG +
Preference number: 5 (lower is better)
Translates to: QAVHVPSVLILSTGQREPLSAFT*DAATSW
Trigger: CCAGCTTGTGGCTGCATCCAAGGTGAAAGCTGATAA...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTTCTTCGATCTGTGATTaGCCGGAAATGGTTGAGGCC +
Preference number: 5 (lower is better)
Translates to: QAVHVPSVLILSTGQREPSSICD*PEMVEA
Trigger: GGCCTCAACCATTTCCGGCAAATCACAGATCGAAGA...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGTGGGTGGGCCAGCACTaGGTCAGTGTGGAGGCGGAG +
Preference number: 5 (lower is better)
Translates to: PISSADTSLAQYGGHTSEWVGQH*VSVEAE
Trigger: CTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCA...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGCTAGGGAGATGGGGGTaGGTTCACAGTGATCAAACA +
Preference number: 5 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGLGRWG*VHSDQT
Trigger: TGTTTGATCACTGTGAACCAACCCCCATCTCCCTAG...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGACCACTTTTGGAAATGTaGACCCGCATCAAGAACACA +
Preference number: 5 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRPLLEM*TRIKNT
Trigger: TGTGTTCTTGATGCGGGTCAACATTTCCAAAAGTGG...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCAAAACAGCTGGCTGGTTaGCTGCGCCGATGGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SRTVHSGREVVLLISPAPKQLAG*LRRWLA
Trigger: TGCCAGCCATCGGCGCAGCAAACCAGCCAGCTGTTT...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CAA 90 bp GAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGGAGTTGAATACTGTTaGGAAGAGGTTGAGTTCACA +
Preference number: 5 (lower is better)
Translates to: ELGITPTLRLWAKGDGPLGVEYC*EEVEFT
Trigger: TGTGAACTCAACCTCTTCCAAACAGTATTCAACTCC...AAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGAATTTTTCGTTGGTCTTaGGCAAGCTGGCACATAGAT +
Preference number: 5 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRIFRWS*ASWHID
Trigger: ATCTATGTGCCAGCTTGCCAAAGACCAACGAAAAAT...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACCCCAGCTCCTCCTGCTaGATGTCCAGTCCCCTGGGC +
Preference number: 5 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHPSSSC*MSSPLG
Trigger: GCCCAGGGGACTGGACATCAAGCAGGAGGAGCTGGG...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp ACCCTGGAGCATGGACTGGGTGGGCCAGCACTTGGTCAGTGTGGAGGCGGAGATATATGGGGTGTTGGTTaGGCTCTATTCTTTTTCGGT +
Preference number: 5 (lower is better)
Translates to: TLEHGLGGPALGQCGGGDIWGVG*ALFFFG
Trigger: ACCGAAAAAGAATAGAGCCAAACCAACACCCCATAT...ATCTCCGCCTCCACACTGACCAAGTGCTGGCCCACCCAGTCCATGCTCCAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGACTGACATATGGGGTGTaGGTTTGGCTCTATTCTTTT +
Preference number: 5 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRLTYGV*VWLYSF
Trigger: AAAAGAATAGAGCCAAACCAACACCCCATATGTCAG...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGTCTTCGTACCTAGGCTaGCTCATGGGCAGCACTGGC +
Preference number: 5 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWSSYLG*LMGSTG
Trigger: GCCAGTGCTGCCCATGAGCAAGCCTAGGTACGAAGA...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGCATGTGATCAAGTTTTaGAGCCTCGTCACGGGAACT +
Preference number: 5 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGHVIKF*SLVTGT
Trigger: AGTTCCCGTGACGAGGCTCAAAAACTTGATCACATG...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTTTCCGGGTTTGTCAATaGCGTAGAAGGTGGAACGAT +
Preference number: 5 (lower is better)
Translates to: QAVHVPSVLILSTGQREPFRVCQ*RRRWND
Trigger: ATCGTTCCACCTTCTACGCAATTGACAAACCCGGAA...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTCTCCAAATGATCTCCTaGCTTTGGGATCCAAGTCAG +
Preference number: 5 (lower is better)
Translates to: QAVHVPSVLILSTGQREPLQMIS*LWDPSQ
Trigger: CTGACTTGGATCCCAAAGCAAGGAGATCATTTGGAG...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTGGGGCATGTGGCTCTGGGAGAGAGTTTTTaGAATGTCCCACTTAGAAAA +
Preference number: 5 (lower is better)
Translates to: CPLSSSCPQGSESLGHVALGESF*NVPLRK
Trigger: TTTTCTAAGTGGGACATTCAAAAAACTCTCTCCCAG...AGCCACATGCCCCAGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GGCCAGCACTTGGTCAGTGTGGAGGCGGAGATGGAGCACCGAGAGGCCTGGGCAGCAGAGAATCTTAATTaGATCCATTACACTAGACTG +
Preference number: 5 (lower is better)
Translates to: GQHLVSVEAEMEHREAWAAENLN*IHYTRL
Trigger: CAGTCTAGTGTAATGGATCAAATTAAGATTCTCTGC...TGCCCAGGCCTCTCGGTGCTCCATCTCCGCCTCCACACTGACCAAGTGCTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCTGCAGTGGTGCGATCTaGGCTCACTACAACCTCTGT +
Preference number: 5 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLICSGAI*AHYNLC
Trigger: ACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACCAGCAGAGCACTGCGTaGCTAGACAGAGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHQQSTA*LDRGRR
Trigger: CCGCCTGCCTCTGTCTAGCAACGCAGTGCTCTGCTG...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp GGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGAGACGGCCCGCTTGACAGACTTGTTCACACCATTTaGACTGTTGAAATTGAAGGG +
Preference number: 5 (lower is better)
Translates to: GITPTLRLWAKGDGPLDRLVHTI*TVEIEG
Trigger: CCCTTCAATTTCAACAGTCAAAATGGTGTGAACAAG...TCTGTCAAGCGGGCCGTCTCCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTTCGCTGTTCATTGGCTaGAGCTTTCCTTTCTATCTC +
Preference number: 5 (lower is better)
Translates to: QAVHVPSVLILSTGQREPSLFIG*SFPFYL
Trigger: GAGATAGAAAGGAAAGCTCAAGCCAATGAACAGCGA...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCACCGATGGCCTTGATCTaGCTCAGGCAGTTCCTCATG +
Preference number: 5 (lower is better)
Translates to: SRTVHSGREVVLLISPAPPMALI*LRQFLM
Trigger: CATGAGGAACTGCCTGAGCAAGATCAAGGCCATCGG...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATAAATTTCCCTCTGCCTaGTACCACCAGATCAGCTGC +
Preference number: 5 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDKFPSA*YHQISC
Trigger: GCAGCTGATCTGGTGGTACAAGGCAGAGGGAAATTT...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGCAGCTGGGCTAGGTaGGGGCTGTCCTTATCAGCT +
Preference number: 5 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHCSWAR*GLSLSA
Trigger: AGCTGATAAGGACAGCCCCAACCTAGCCCAGCTGCA...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACATTTGCCGGAAATGGTaGAGGCCACAACGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHICRKW*RPQRRQ
Trigger: CTGCCGGCGTTGTGGCCTCAACCATTTCCGGCAAAT...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGAGGGAGACGGCCCGCTaGACAGAGACCATTCACGGA +
Preference number: 5 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKRETAR*TETIHG
Trigger: TCCGTGAATGGTCTCTGTCAAGCGGGCCGTCTCCCT...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp CCAAACAGAAAGGGTGTCGCTATGGAGGGAGTCTTTGGAAGTGTCATGCATGTCAGAGGAAAAGTGCTGTaGGGCTGCCCATCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: PNRKGVAMEGVFGSVMHVRGKVL*GCPSLA
Trigger: TGCCAGGGATGGGCAGCCCAACAGCACTTTTCCTCT...GACATGCATGACACTTCCAAAGACTCCCTCCATAGCGACACCCTTTCTGTTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS GCA 90 bp TTCTGTGCTCGGCTTCAGAGTGAGAGAGGAATACGGGGAGGTGACTaGAAAACTCGGTTAAGAACAGGGCTCCGTGACTTCTCTTTCCTC +
Preference number: 5 (lower is better)
Translates to: FCARLQSERGIRGGD*KTRLRTGLRDFSFL
Trigger: GAGGAAAGAGAAGTCACGGAGCCCTGTTCTTAACCGAGTTTTGCAGTCACCTCCCCGTATTCCTCTCTCACTCTGAAGCCGAGCACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485723.1
CDS-3UTR CAA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCACCTTGGGCAGTGGGTaGGGCACCTGCTTCATGGAG +
Preference number: 5 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVTLGSG*GTCFME
Trigger: CTCCATGAAGCAGGTGCCCAACCCACTGCCCAAGGT...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CAA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGAACCTTGGGCAGTGGGTaGGGCACCTGCTTCATGGAG +
Preference number: 5 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRTLGSG*GTCFME
Trigger: CTCCATGAAGCAGGTGCCCAACCCACTGCCCAAGGT...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGACAGAGGCAGGCGGTaGACAACAGACCAGAAGGTC +
Preference number: 5 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKDRGRR*TTDQKV
Trigger: GACCTTCTGGTCTGTTGTCAACCGCCTGCCTCTGTC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACAGCAGAGCACTGCGTaGCTAGACAGAGGCAGGCGG +
Preference number: 5 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLQQSTA*LDRGRR
Trigger: CCGCCTGCCTCTGTCTAGCAACGCAGTGCTCTGCTG...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGCCATCTCGGAGGAGTTaGTGGAACACATGGCAGAAC +
Preference number: 5 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWPSRRS*WNTWQN
Trigger: GTTCTGCCATGTGTTCCACAAACTCCTCCGAGATGG...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATGTGTGGTACTCCATCTaGGTTCTTAGCAGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDVWYSI*VLSSFR
Trigger: CCTGAAACTGCTAAGAACCAAGATGGAGTACCACAC...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp CGTCTGCAGAAAGGAGTTGGGAATCACTCCCACACTCCGTCTCTGGGCCAAGGGGGAGTTGAATACTGTTaGGAAGAGGTTGAGTTCACA +
Preference number: 5 (lower is better)
Translates to: RLQKGVGNHSHTPSLGQGGVEYC*EEVEFT
Trigger: TGTGAACTCAACCTCTTCCAAACAGTATTCAACTCC...CCCTTGGCCCAGAGACGGAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACAACCTGAAGCTCCCGTaGGCTTGTGGCAAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHNLKLP*ACGKFL
Trigger: CAGGAACTTGCCACAAGCCAACGGGAGCTTCAGGTT...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACCTGGTTCAGGGCGTCTaGTATCACCTGCTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHLVQGV*YHLLRS
Trigger: GCTGCGGAGCAGGTGATACAAGACGCCCTGAACCAG...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTTCCTCGCCGATGGCCTaGATCTTGCTCAGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSSSPMA*ILLRQF
Trigger: GAACTGCCTGAGCAAGATCAAGGCCATCGGCGAGGA...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCAGAGCACCTGAATAGCTaGCATGAGGCTGGTACAGCA +
Preference number: 5 (lower is better)
Translates to: SRTVHSGREVVLLISPAPEHLNS*HEAGTA
Trigger: TGCTGTACCAGCCTCATGCAAGCTATTCAGGTGCTC...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CAA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGTGCAGCTGGGCTAGGTaGGGGCTGTCCTTATCAGCT +
Preference number: 5 (lower is better)
Translates to: NDLPIQEDAKADVCRKELCSWAR*GLSLSA
Trigger: AGCTGATAAGGACAGCCCCAACCTAGCCCAGCTGCA...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTCTGACATATGGGGTGTaGGTTTGGCTCTATTCTTTT +
Preference number: 5 (lower is better)
Translates to: QAVHVPSVLILSTGQREPLTYGV*VWLYSF
Trigger: AAAAGAATAGAGCCAAACCAACACCCCATATGTCAG...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGACTCCAAGGATTaGGCCTGTGGCTGGGGAAAT +
Preference number: 5 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHWDSKD*ACGWGN
Trigger: ATTTCCCCAGCCACAGGCCAAATCCTTGGAGTCCCA...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGTCTTCGTACCTAGGCTaGCTCATGGGCAGCACTGGC +
Preference number: 5 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKSSYLG*LMGSTG
Trigger: GCCAGTGCTGCCCATGAGCAAGCCTAGGTACGAAGA...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATCATGTGATCAAGTTTTaGAGCCTCGTCACGGGAACT +
Preference number: 5 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDHVIKF*SLVTGT
Trigger: AGTTCCCGTGACGAGGCTCAAAAACTTGATCACATG...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATAGGGAGACGGCCCGCTaGACAGAGACCATTCACGGA +
Preference number: 5 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDRETAR*TETIHG
Trigger: TCCGTGAATGGTCTCTGTCAAGCGGGCCGTCTCCCT...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TGCAGTGGTGCGATCTTGGCTCACTACAACCTCTGTCCCCCGGGTTCAAGTGATCCTAGCAATATTCTGTaGGAGCAGATCCTGGGAAGT +
Preference number: 5 (lower is better)
Translates to: CSGAILAHYNLCPPGSSDPSNIL*EQILGS
Trigger: ACTTCCCAGGATCTGCTCCAACAGAATATTGCTAGG...ATCACTTGAACCCGGGGGACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTTCGAACCCAACAGCATaGAATTGTTTCCTGTTGCTT +
Preference number: 5 (lower is better)
Translates to: QAVHVPSVLILSTGQREPSNPTA*NCFLLL
Trigger: AAGCAACAGGAAACAATTCAATGCTGTTGGGTTCGA...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS TCA 90 bp TGTTTGGTCACCTCTGCATTCTTCCGCAGCAGGTCAGCGTGGTTCTaGACCAGCTCGCTGTACTTCTCCTTTAGCTTGCTATATCGCTGT +
Preference number: 5 (lower is better)
Translates to: CLVTSAFFRSRSAWF*TSSLYFSFSLLYRC
Trigger: ACAGCGATATAGCAAGCTAAAGGAGAAGTACAGCGAGCTGGTTCAGAACCACGCTGACCTGCTGCGGAAGAATGCAGAGGTGACCAAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS TCA 90 bp TCCACAATCTCTCTCTGGAGGTCCTTAGAGGCCACGATGAGCACCTaGATAGCTTGCATGAGGCTGGTACAGCAACCAAGGATCCTTTCA +
Preference number: 5 (lower is better)
Translates to: STISLWRSLEATMST*IACMRLVQQPRILS
Trigger: TGAAAGGATCCTTGGTTGCTGTACCAGCCTCATGCAAGCTATTCAGGTGCTCATCGTGGCCTCTAAGGACCTCCAGAGAGAGATTGTGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000616821.4
CDS GCA 90 bp ACCAAGGATCCTTTCATTCACCTCCAATTTGACTCCTGTGTCTCCTaGTCGGGATTTGCTGAGCATCTCCTCTATTCTGGCCGTGGCAGT +
Preference number: 5 (lower is better)
Translates to: TKDPFIHLQFDSCVS*SGFAEHLLYSGRGS
Trigger: ACTGCCACGGCCAGAATAGAGGAGATGCTCAGCAAATCCCGAGCAGGAGACACAGGAGTCAAATTGGAGGTGAATGAAAGGATCCTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000616821.4
CDS GCA 90 bp CCCAGTATGCACGTTCTGGCGTGTTTTTCCTTTACAGCCACTTCCTaGGTATTAATGGCCTTATTGATGCTGACAGTCTCTGGAGGGGGC +
Preference number: 5 (lower is better)
Translates to: PSMHVLACFSFTATS*VLMALLMLTVSGGG
Trigger: GCCCCCTCCAGAGACTGTCAGCATCAATAAGGCCATTAATACGCAGGAAGTGGCTGTAAAGGAAAAACACGCCAGAACGTGCATACTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000420909.1
ENST00000616821.4
CDS CCA 90 bp AAGTTTCCAGGCTGCCTTGCAGAACCTGAAGCTCCCGTTGGCTTGTaGCAAGTTCCTGCTTCAAGCTCTCTAGAACTTCCAGCTGTTCTT +
Preference number: 5 (lower is better)
Translates to: KFPGCLAEPEAPVGL*QVPASSSLELPAVL
Trigger: AAGAACAGCTGGAAGTTCTAGAGAGCTTGAAGCAGGAACTTGCCACAAGCCAACGGGAGCTTCAGGTTCTGCAAGGCAGCCTGGAAACTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGCCATCTCGGAGGAGTTaGTGGAACACATGGCAGAAC +
Preference number: 5 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALPSRRS*WNTWQN
Trigger: GTTCTGCCATGTGTTCCACAAACTCCTCCGAGATGG...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTAACCTGAAGCTCCCGTaGGCTTGTGGCAAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSNLKLP*ACGKFL
Trigger: CAGGAACTTGCCACAAGCCAACGGGAGCTTCAGGTT...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGAAGTTTCCAGGCTGCCTaGCAGAACCTGAAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRSFQAA*QNLKLP
Trigger: CGGGAGCTTCAGGTTCTGCAAGGCAGCCTGGAAACT...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATAGTTTCCAGGCTGCCTaGCAGAACCTGAAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDSFQAA*QNLKLP
Trigger: CGGGAGCTTCAGGTTCTGCAAGGCAGCCTGGAAACT...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATACTCGGCTGCCCAGTTaGCTTCTGACTGGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDTRLPS*LLTGQK
Trigger: CTTCTGCCCAGTCAGAAGCAAACTGGGCAGCCGAGT...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACTCCTCGCCGATGGCCTaGATCTTGCTCAGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHSSPMA*ILLRQF
Trigger: GAACTGCCTGAGCAAGATCAAGGCCATCGGCGAGGA...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATTATCAGCTTTCACCTaGGATGCAGCCACAAGCTGG +
Preference number: 5 (lower is better)
Translates to: SRTVHSGREVVLLISPAPLSAFT*DAATSW
Trigger: CCAGCTTGTGGCTGCATCCAAGGTGAAAGCTGATAA...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACATTTGCCGGAAATGGTaGAGGCCACAACGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHICRKW*RPQRRQ
Trigger: CTGCCGGCGTTGTGGCCTCAACCATTTCCGGCAAAT...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACGGCAGGGAAGTAGTGTaGTTGATCTCACCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHGREVV*LISPAP
Trigger: TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCC...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGGTCTGCAGAAAGGAGTaGGGAATCACTCCCACACTC +
Preference number: 5 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWVCRKE*GITPTL
Trigger: GAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGAC...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp CAAGCTGTTCATGTGCCCTCTGTCCTCATCCTGTCCACAGGGCAGCGAGAGCCTCTGGGAGAGAGTTTTTaGAATGTCCCACTTAGAAAA +
Preference number: 5 (lower is better)
Translates to: QAVHVPSVLILSTGQREPLGESF*NVPLRK
Trigger: TTTTCTAAGTGGGACATTCAAAAAACTCTCTCCCAG...AGGCTCTCGCTGCCCTGTGGACAGGATGAGGACAGAGGGCACATGAACAGCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TGCAAGCTGAGAACTAGCTCCTGCACAGGGTCGAGGGGCCAAAGCCAACTAATCCCACTTTTGGAAATGTaGACCCGCATCAAGAACACA +
Preference number: 5 (lower is better)
Translates to: CKLRTSSCTGSRGQSQLIPLLEM*TRIKNT
Trigger: TGTGTTCTTGATGCGGGTCAACATTTCCAAAAGTGG...GATTAGTTGGCTTTGGCCCCTCGACCCTGTGCAGGAGCTAGTTCTCAGCTTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGCAGTGGTGCGATCTaGGCTCACTACAACCTCTGT +
Preference number: 5 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHCSGAI*AHYNLC
Trigger: ACAGAGGTTGTAGTGAGCCAAGATCGCACCACTGCA...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGGTGCTGATCTTGTATTaGGTCTGGACCTGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALVLILY*VWTWER
Trigger: CCTCTCCCAGGTCCAGACCAAATACAAGATCAGCAC...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CAA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCCATCTCGGAGGAGTTaGTGGAACACATGGCAGAAC +
Preference number: 5 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKPSRRS*WNTWQN
Trigger: GTTCTGCCATGTGTTCCACAAACTCCTCCGAGATGG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCAAATCTACCTGGGCTaGTCTGGCCATGGACACCTG +
Preference number: 5 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDQIYLG*SGHGHL
Trigger: CAGGTGTCCATGGCCAGACAAGCCCAGGTAGATTTG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATAACTTCCAGCTGTTCTaGAGTCTTCCGCTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDNFQLF*SLPLAL
Trigger: CAGGGCCAGCGGAAGACTCAAGAACAGCTGGAAGTT...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACAACTTCCAGCTGTTCTaGAGTCTTCCGCTGGCCCTG +
Preference number: 5 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHNFQLF*SLPLAL
Trigger: CAGGGCCAGCGGAAGACTCAAGAACAGCTGGAAGTT...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATGAAGCTCCCGTTGGCTaGTGGCAAGTTCCTGCTTCA +
Preference number: 5 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDEAPVG*WQVPAS
Trigger: TGAAGCAGGAACTTGCCACAAGCCAACGGGAGCTTC...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAACTCGGCTGCCCAGTTaGCTTCTGACTGGGCAGAAG +
Preference number: 5 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLTRLPS*LLTGQK
Trigger: CTTCTGCCCAGTCAGAAGCAAACTGGGCAGCCGAGT...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp ACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGGCCAGCTTTTCTCCAGTaGCTCGATGCAGCTGGAAAT +
Preference number: 5 (lower is better)
Translates to: TIFLFKRMPRQTSAERSWPAFLQ*LDAAGN
Trigger: ATTTCCAGCTGCATCGAGCAACTGGAGAAAAGCTGG...CCAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATGCAGCTGGGCTAGGTaGGGGCTGTCCTTATCAGCT +
Preference number: 5 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLCSWAR*GLSLSA
Trigger: AGCTGATAAGGACAGCCCCAACCTAGCCCAGCTGCA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATTCTTCGATCTGTGATTaGCCGGAAATGGTTGAGGCC +
Preference number: 5 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYSSICD*PEMVEA
Trigger: GGCCTCAACCATTTCCGGCAAATCACAGATCGAAGA...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACGTGTCAGCGTCATGCTaGAGAAGTCCATGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHVSASC*RSPCCL
Trigger: CAGACAACATGGACTTCTCAAGCATGACGCTGACAC...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACTGGGACTCCAAGGATTaGGCCTGTGGCTGGGGAAAT +
Preference number: 5 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHWDSKD*ACGWGN
Trigger: ATTTCCCCAGCCACAGGCCAAATCCTTGGAGTCCCA...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGGCAGGGAAGTAGTGTaGTTGATCTCACCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKGREVV*LISPAP
Trigger: TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGTCTGCAGAAAGGAGTaGGGAATCACTCCCACACTC +
Preference number: 5 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKVCRKE*GITPTL
Trigger: GAGTGTGGGAGTGATTCCCAACTCCTTTCTGCAGAC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGACCTTGGTGTCTGACTaGGTAGCTGGGACAGTTCCA +
Preference number: 5 (lower is better)
Translates to: PISSADTSLAQYGGHTSETLVSD*VAGTVP
Trigger: TGGAACTGTCCCAGCTACCAAGTCAGACACCAAGGT...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGGTGTGGTGCTGATCTaGTATTTGGTCTGGACCTGG +
Preference number: 5 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKGVVLI*YLVWTW
Trigger: CCAGGTCCAGACCAAATACAAGATCAGCACCACACC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CAA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGGGGAACCTGGGATTTTaGGTGTGGTACTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: PISSADTSLAQYGGHTSEGNLGF*VWYSIL
Trigger: CAAGATGGAGTACCACACCAAAAATCCCAGGTTCCC...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCTCACTCATCTGCAGGTaGCCTGGGAACCTGGGATTT +
Preference number: 5 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVSLICR*PGNLGF
Trigger: AAATCCCAGGTTCCCAGGCAACCTGCAGATGAGTGA...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CAA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACTCACTCATCTGCAGGTaGCCTGGGAACCTGGGATTT +
Preference number: 5 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHSLICR*PGNLGF
Trigger: AAATCCCAGGTTCCCAGGCAACCTGCAGATGAGTGA...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATGCCATGGACACCTGTTaGGTCACCTCTGCATTCTTC +
Preference number: 5 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDAMDTC*VTSAFF
Trigger: GAAGAATGCAGAGGTGACCAAACAGGTGTCCATGGC...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAAACCTGAAGCTCCCGTaGGCTTGTGGCAAGTTCCTG +
Preference number: 5 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLNLKLP*ACGKFL
Trigger: CAGGAACTTGCCACAAGCCAACGGGAGCTTCAGGTT...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp GTAGCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACCAGAAGCATTTTTCGTaGGTCTTTGGCAAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: VAGTVPRKVALDSGSSSHQKHFS*VFGKLA
Trigger: TGCCAGCTTGCCAAAGACCAACGAAAAATGCTTCTG...GTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCCAGCTTTTCTCCAGTaGCTCGATGCAGCTGGAAAT +
Preference number: 5 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKPAFLQ*LDAAGN
Trigger: ATTTCCAGCTGCATCGAGCAACTGGAGAAAAGCTGG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACCGATGGCCTTGATCTaGCTCAGGCAGTTCCTCATG +
Preference number: 5 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLPMALI*LRQFLM
Trigger: CATGAGGAACTGCCTGAGCAAGATCAAGGCCATCGG...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACGAGCACCTGAATAGCTaGCATGAGGCTGGTACAGCA +
Preference number: 5 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHEHLNS*HEAGTA
Trigger: TGCTGTACCAGCCTCATGCAAGCTATTCAGGTGCTC...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000616821.4
CDS-3UTR CAA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGTTATCAGCTTTCACCTaGGATGCAGCCACAAGCTGG +
Preference number: 5 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKLSAFT*DAATSW
Trigger: CCAGCTTGTGGCTGCATCCAAGGTGAAAGCTGATAA...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp AGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTATTTGCCGGAAATGGTaGAGGCCACAACGCCGGCAG +
Preference number: 5 (lower is better)
Translates to: REVVLLISPAPFKHVIKFICRKW*RPQRRQ
Trigger: CTGCCGGCGTTGTGGCCTCAACCATTTCCGGCAAAT...AAACTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp CCAATTTCTAGTGCTGATACTTCCTTAGCCCAGTATGGAGGTCACACGTCTGAGTCCATCTCTTGGCGTTaGATCTGTGTCAGCGTCATG +
Preference number: 5 (lower is better)
Translates to: PISSADTSLAQYGGHTSESISWR*ICVSVM
Trigger: CATGACGCTGACACAGATCAAACGCCAAGAGATGGA...CTCAGACGTGTGACCTCCATACTGGGCTAAGGAAGTATCAGCACTAGAAATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGTCCATCTCTTGGCGTTaGATCTGTGTCAGCGTCATG +
Preference number: 5 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKSISWR*ICVSVM
Trigger: CATGACGCTGACACAGATCAAACGCCAAGAGATGGA...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGTTCGGTTACCACTTCTaGCAGTGTAGGTGGAGATGC +
Preference number: 5 (lower is better)
Translates to: NDLPIQEDAKADVCRKELFGYHF*QCRWRC
Trigger: GCATCTCCACCTACACTGCAAGAAGTGGTAACCGAA...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAAGGGGGAGAATGGCTTaGGCATTCACAGCCAGGACA +
Preference number: 5 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLRGRMA*AFTART
Trigger: TGTCCTGGCTGTGAATGCCAAAGCCATTCTCCCCCT...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGAGGGAAGTAGTGTTGTaGATCTCACCAGCTCCATTC +
Preference number: 5 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALREVVL*ISPAPF
Trigger: GAATGGAGCTGGTGAGATCAACAACACTACTTCCCT...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp ATAAGAAGCAGTGGAAATCCATGGCACTGCCCAAAGAGGGGGAGAATGGCTTTGCTCCAAATGATCTCCTaGCTTTGGGATCCAAGTCAG +
Preference number: 5 (lower is better)
Translates to: IRSSGNPWHCPKRGRMALLQMIS*LWDPSQ
Trigger: CTGACTTGGATCCCAAAGCAAGGAGATCATTTGGAG...CAAAGCCATTCTCCCCCTCTTTGGGCAGTGCCATGGATTTCCACTGCTTCTTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp AGGGAAGTAGTGTTGTTGATCTCACCAGCTCCATTCAAGCATGTGATCAAGTTTAGAGGAAAAGTGCTGTaGGGCTGCCCATCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: REVVLLISPAPFKHVIKFRGKVL*GCPSLA
Trigger: TGCCAGGGATGGGCAGCCCAACAGCACTTTTCCTCT...AAACTTGATCACATGCTTGAATGGAGCTGGTGAGATCAACAACACTACTTCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TCACGGACAGTTCATTCCGGCAGGGAAGTAGTGTTGTTGATCTCACCAGCTCCACCCAACAGCATTGAATaGTTTCCTGTTGCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: SRTVHSGREVVLLISPAPPNSIE*FPVALA
Trigger: AGCCAAAGCAACAGGAAACAATTCAATGCTGTTGGG...TGGAGCTGGTGAGATCAACAACACTACTTCCCTGCCGGAATGAACTGTCCGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS GCA 90 bp GGTCAGCGTGGTTCTGAACCAGCTCGCTGTACTTCTCCTTTAGCTTaGTATATCGCTGTTCATTGGCTTGAGCTTTCCTTTCTATCTCAG +
Preference number: 5 (lower is better)
Translates to: GQRGSEPARCTSPLA*YIAVHWLELSFLSQ
Trigger: CTGAGATAGAAAGGAAAGCTCAAGCCAATGAACAGCGATATAGCAAGCTAAAGGAGAAGTACAGCGAGCTGGTTCAGAACCACGCTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS GCA 90 bp AAATGTTATGGCTACAGGTTCTTTCCACGGCTCTGTGCTGCCTCTTaGTGTCCTGTTATACAATCCAGTGGTCTGGAGTTCATTTGGCCA +
Preference number: 5 (lower is better)
Translates to: KCYGYRFFPRLCAAS*CPVIQSSGLEFIWP
Trigger: TGGCCAAATGAACTCCAGACCACTGGATTGTATAACAGGACAGCAAGAGGCAGCACAGAGCCGTGGAAAGAACCTGTAGCCATAACATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485723.1
CDS-3UTR CAA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGTGTGGTACTCCATCTaGGTTCTTAGCAGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKVWYSI*VLSSFR
Trigger: CCTGAAACTGCTAAGAACCAAGATGGAGTACCACAC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATGGGAACCTGGGATTTTaGGTGTGGTACTCCATCTTG +
Preference number: 5 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDGNLGF*VWYSIL
Trigger: CAAGATGGAGTACCACACCAAAAATCCCAGGTTCCC...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGCAGAAGCATTTTTCGTaGGTCTTTGGCAAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKQKHFS*VFGKLA
Trigger: TGCCAGCTTGCCAAAGACCAACGAAAAATGCTTCTG...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTCTGGTTCAGGGCGTCTaGTATCACCTGCTCCGCAGC +
Preference number: 5 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSLVQGV*YHLLRS
Trigger: GCTGCGGAGCAGGTGATACAAGACGCCCTGAACCAG...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACTCTCCTGCTCGGGATTaGCTGAGCATCTCCTCTATT +
Preference number: 5 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHSPARD*LSISSI
Trigger: AATAGAGGAGATGCTCAGCAAATCCCGAGCAGGAGA...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000616821.4
CDS-3UTR CAA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGTCATTCACCTCCAATTaGACTCCTGTGTCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKSFTSN*TPVSPA
Trigger: AGCAGGAGACACAGGAGTCAAATTGGAGGTGAATGA...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000616821.4
CDS-3UTR CAA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTCTTCGATCTGTGATTaGCCGGAAATGGTTGAGGCC +
Preference number: 5 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDSSICD*PEMVEA
Trigger: GGCCTCAACCATTTCCGGCAAATCACAGATCGAAGA...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACGTGTCAGCGTCATGCTaGAGAAGTCCATGTTGTCTG +
Preference number: 5 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHVSASC*RSPCCL
Trigger: CAGACAACATGGACTTCTCAAGCATGACGCTGACAC...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTCGGTTACCACTTCTaGCAGTGTAGGTGGAGATGC +
Preference number: 5 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDFGYHF*QCRWRC
Trigger: GCATCTCCACCTACACTGCAAGAAGTGGTAACCGAA...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGACTATGGAGGGAGTCTTaGGAAGTGTCATGCATGTCC +
Preference number: 5 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRLWRES*EVSCMS
Trigger: GGACATGCATGACACTTCCAAAGACTCCCTCCATAG...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTCCTAGCAATATTCTGTaGGAGCAGATCCTGGGAAGT +
Preference number: 5 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSPSNIL*EQILGS
Trigger: ACTTCCCAGGATCTGCTCCAACAGAATATTGCTAGG...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGACTAGGGAGATGGGGGTaGGTTCACAGTGATCAAACA +
Preference number: 5 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRLGRWG*VHSDQT
Trigger: TGTTTGATCACTGTGAACCAACCCCCATCTCCCTAG...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTGTTTCCTGTTGCTTaGGCTCCTGACAACACCACG +
Preference number: 5 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDLFPVA*APDNTT
Trigger: CGTGGTGTTGTCAGGAGCCAAAGCAACAGGAAACAA...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CAA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACGTGTGGTACTCCATCTaGGTTCTTAGCAGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHVWYSI*VLSSFR
Trigger: CCTGAAACTGCTAAGAACCAAGATGGAGTACCACAC...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp GCTGGGACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAACTGGAAAAAGTaGTTCACGTCACTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: AGTVPRKVALDSGSSSHWVNWKK*FTSLSP
Trigger: TGGAGAAAGTGACGTGAACAACTTTTTCCAGTTAAC...CCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGTCCCAGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTAGTTTCCAGGCTGCCTaGCAGAACCTGAAGCTCCCG +
Preference number: 5 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSSFQAA*QNLKLP
Trigger: CGGGAGCTTCAGGTTCTGCAAGGCAGCCTGGAAACT...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp AGTTTGAGACAACTGCATTATCACCAAGATGTAACCGAACCCCCTCGGTTTGTCCAGAAGCATTTTTCGTaGGTCTTTGGCAAGCTGGCA +
Preference number: 5 (lower is better)
Translates to: SLRQLHYHQDVTEPPRFVQKHFS*VFGKLA
Trigger: TGCCAGCTTGCCAAAGACCAACGAAAAATGCTTCTG...GACAAACCGAGGGGGTTCGGTTACATCTTGGTGATAATGCAGTTGTCTCAAACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CAA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACCAGCTTTTCTCCAGTaGCTCGATGCAGCTGGAAAT +
Preference number: 5 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLPAFLQ*LDAAGN
Trigger: ATTTCCAGCTGCATCGAGCAACTGGAGAAAAGCTGG...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTTCCTCGCCGATGGCCTaGATCTTGCTCAGGCAGTTC +
Preference number: 5 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSSSPMA*ILLRQF
Trigger: GAACTGCCTGAGCAAGATCAAGGCCATCGGCGAGGA...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAAAATTTCCCTCTGCCTaGTACCACCAGATCAGCTGC +
Preference number: 5 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLKFPSA*YHQISC
Trigger: GCAGCTGATCTGGTGGTACAAGGCAGAGGGAAATTT...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGACTGAGAATCCATCTCTaGGCGTTTGATCTGTGTCAG +
Preference number: 5 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRLRIHL*AFDLCQ
Trigger: CTGACACAGATCAAACGCCAAGAGATGGATTCTCAG...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATTCGGTTACCACTTCTaGCAGTGTAGGTGGAGATGC +
Preference number: 5 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLFGYHF*QCRWRC
Trigger: GCATCTCCACCTACACTGCAAGAAGTGGTAACCGAA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATAGGGAAGTAGTGTTGTaGATCTCACCAGCTCCATTC +
Preference number: 5 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDREVVL*ISPAPF
Trigger: GAATGGAGCTGGTGAGATCAACAACACTACTTCCCT...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS TCA 90 bp GCTGGCTCTCAGTCTTCATGTTTTCTAGCTGTGCCTTCAATCCACTaGTCTCTCTGTATAGTCGCTCAATTAAGTGGTCCTTCTCATCCT +
Preference number: 5 (lower is better)
Translates to: AGSQSSCFLAVPSIH*SLCIVAQLSGPSHP
Trigger: AGGATGAGAAGGACCACTTAATTGAGCGACTATACAGAGAGATCAGTGGATTGAAGGCACAGCTAGAAAACATGAAGACTGAGAGCCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000404944.3
ENST00000434438.6
ENST00000616821.4
CDS GCA 90 bp ATTCATCAAATGTTATGGCTACAGGTTCTTTCCACGGCTCTGTGCTaGCTCTTGCTGTCCTGTTATACAATCCAGTGGTCTGGAGTTCAT +
Preference number: 5 (lower is better)
Translates to: IHQMLWLQVLSTALC*LLLSCYTIQWSGVH
Trigger: ATGAACTCCAGACCACTGGATTGTATAACAGGACAGCAAGAGGCAGCACAGAGCCGTGGAAAGAACCTGTAGCCATAACATTTGATGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485723.1
CDS GCA 90 bp TTCATTCATCAAATGTTATGGCTACAGGTTCTTTCCACGGCTCTGTaGTGCCTCTTGCTGTCCTGTTATACAATCCAGTGGTCTGGAGTT +
Preference number: 5 (lower is better)
Translates to: FIHQMLWLQVLSTAL*CLLLSCYTIQWSGV
Trigger: AACTCCAGACCACTGGATTGTATAACAGGACAGCAAGAGGCAGCACAGAGCCGTGGAAAGAACCTGTAGCCATAACATTTGATGAATGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485723.1
CDS-3UTR CAA 90 bp CCAAACAGAAAGGGTGTCGCTATGGAGGGAGTCTTTGGAAGTGTCATGCATGTCGTTAACTGGAAAAAGTaGTTCACGTCACTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: PNRKGVAMEGVFGSVMHVVNWKK*FTSLSP
Trigger: TGGAGAAAGTGACGTGAACAACTTTTTCCAGTTAAC...GACATGCATGACACTTCCAAAGACTCCCTCCATAGCGACACCCTTTCTGTTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGGAGTTGAATACTGTTaGGAAGAGGTTGAGTTCACA +
Preference number: 5 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKGVEYC*EEVEFT
Trigger: TGTGAACTCAACCTCTTCCAAACAGTATTCAACTCC...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTAGACATGTCCAGGGAGTaGAATACTGTTTGGAAGAGG +
Preference number: 5 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLDMSRE*NTVWKR
Trigger: CCTCTTCCAAACAGTATTCAACTCCCTGGACATGTC...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp AGGCGGGAAAAGAACAGAGATGACCATGGGTCCAAACAGAAAGGGTGTCGCTATCTTGTTCACACCATTTaGACTGTTGAAATTGAAGGG +
Preference number: 5 (lower is better)
Translates to: RREKNRDDHGSKQKGCRYLVHTI*TVEIEG
Trigger: CCCTTCAATTTCAACAGTCAAAATGGTGTGAACAAG...ATAGCGACACCCTTTCTGTTTGGACCCATGGTCATCTCTGTTCTTTTCCCGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGATCGCTGTTCATTGGCTaGAGCTTTCCTTTCTATCTC +
Preference number: 5 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRSLFIG*SFPFYL
Trigger: GAGATAGAAAGGAAAGCTCAAGCCAATGAACAGCGA...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACTCGCTGTTCATTGGCTaGAGCTTTCCTTTCTATCTC +
Preference number: 5 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHSLFIG*SFPFYL
Trigger: GAGATAGAAAGGAAAGCTCAAGCCAATGAACAGCGA...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACTGAGAATCCATCTCTaGGCGTTTGATCTGTGTCAG +
Preference number: 5 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLLRIHL*AFDLCQ
Trigger: CTGACACAGATCAAACGCCAAGAGATGGATTCTCAG...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp TCCAAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGATATGGGGTGTTGGTTaGGCTCTATTCTTTTTCGGT +
Preference number: 5 (lower is better)
Translates to: SKDLACGWGNNTHEIGNKIWGVG*ALFFFG
Trigger: ACCGAAAAAGAATAGAGCCAAACCAACACCCCATAT...CTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTTGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTCAAATCTACCTGGGCTaGTCTGGCCATGGACACCTG +
Preference number: 5 (lower is better)
Translates to: YKITLPRWLFSSISFSLSQIYLG*SGHGHL
Trigger: CAGGTGTCCATGGCCAGACAAGCCCAGGTAGATTTG...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACATTTTTCGTTGGTCTTaGGCAAGCTGGCACATAGAT +
Preference number: 5 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHIFRWS*ASWHID
Trigger: ATCTATGTGCCAGCTTGCCAAAGACCAACGAAAAAT...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTCCGATGGCCTTGATCTaGCTCAGGCAGTTCCTCATG +
Preference number: 5 (lower is better)
Translates to: YKITLPRWLFSSISFSLSPMALI*LRQFLM
Trigger: CATGAGGAACTGCCTGAGCAAGATCAAGGCCATCGG...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGAATATGGGGTGTTGGTTaGGCTCTATTCTTTTTCGGT +
Preference number: 5 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRIWGVG*ALFFFG
Trigger: ACCGAAAAAGAATAGAGCCAAACCAACACCCCATAT...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCTGACATATGGGGTGTaGGTTTGGCTCTATTCTTTT +
Preference number: 5 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDLTYGV*VWLYSF
Trigger: AAAAGAATAGAGCCAAACCAACACCCCATATGTCAG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACAATGATCTCCTTGCTTaGGGATCCAAGTCAGTAACA +
Preference number: 5 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHNDLLA*GSKSVT
Trigger: TGTTACTGACTTGGATCCCAAAGCAAGGAGATCATT...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp ACAGTTCCAAGAAAAGTTGCTCTAGACAGTGGTTCTTCCAGCCACTGGGTTAGAAATGATCTCCTTGCTTaGGGATCCAAGTCAGTAACA +
Preference number: 5 (lower is better)
Translates to: TVPRKVALDSGSSSHWVRNDLLA*GSKSVT
Trigger: TGTTACTGACTTGGATCCCAAAGCAAGGAGATCATT...TCTAACCCAGTGGCTGGAAGAACCACTGTCTAGAGCAACTTTTCTTGGAACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTAGCAATCATCCCGTCTaGGCCTCCCAAAGTTCTGGG +
Preference number: 5 (lower is better)
Translates to: YKITLPRWLFSSISFSLSSNHPV*ASQSSG
Trigger: CCCAGAACTTTGGGAGGCCAAGACGGGATGATTGCT...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTACGCTCACCCGAGACTaGTCACTAGTGATGCTCAGT +
Preference number: 5 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSTLTRD*SLVMLS
Trigger: ACTGAGCATCACTAGTGACAAGTCTCGGGTGAGCGT...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATGTATTAATGGCCTTATaGATGCTGACAGTCTCTGGA +
Preference number: 5 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDVLMAL*MLTVSG
Trigger: TCCAGAGACTGTCAGCATCAATAAGGCCATTAATAC...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616821.4
CDS-3UTR CAA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTTCACTCATCTGCAGGTaGCCTGGGAACCTGGGATTT +
Preference number: 5 (lower is better)
Translates to: YKITLPRWLFSSISFSLSSLICR*PGNLGF
Trigger: AAATCCCAGGTTCCCAGGCAACCTGCAGATGAGTGA...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTACACGTTAACTGGAAAAAGTaGTTCACGTCACTTTCTCCA +
Preference number: 5 (lower is better)
Translates to: LACGWGNNTHEIGNKDLHVNWKK*FTSLSP
Trigger: TGGAGAAAGTGACGTGAACAACTTTTTCCAGTTAAC...GTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp AAGGATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATCTTGTTCACACCATTTaGACTGTTGAAATTGAAGGG +
Preference number: 5 (lower is better)
Translates to: KDLACGWGNNTHEIGNKDLVHTI*TVEIEG
Trigger: CCCTTCAATTTCAACAGTCAAAATGGTGTGAACAAG...ATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATCCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS-3UTR CAA 90 bp GCTTTGGGATCCAAGTCAGTAACAGTCCAGCACCTTGGCCTTTCTTCTGATTCTGCAGAGAATCTTAATTaGATCCATTACACTAGACTG +
Preference number: 5 (lower is better)
Translates to: ALGSKSVTVQHLGLSSDSAENLN*IHYTRL
Trigger: CAGTCTAGTGTAATGGATCAAATTAAGATTCTCTGC...AGAATCAGAAGAAAGGCCAAGGTGCTGGACTGTTACTGACTTGGATCCCAAAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp GATTTGGCCTGTGGCTGGGGAAATAACACACACGAGATAGGTAACAAGGATTTATTGAATTGTTTCCTGTaGCTTTGGCTCCTGACAACA +
Preference number: 5 (lower is better)
Translates to: DLACGWGNNTHEIGNKDLLNCFL*LWLLTT
Trigger: TGTTGTCAGGAGCCAAAGCAACAGGAAACAATTCAA...TAAATCCTTGTTACCTATCTCGTGTGTGTTATTTCCCCAGCCACAGGCCAAATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CAA 90 bp AACGATCTTCCTATTCAAGAGGATGCCAAGGCAGACGTCTGCAGAAAGGAGTTGATAATAAAAGTATTGTaGGAGGGAAACAGAAGCCAG +
Preference number: 5 (lower is better)
Translates to: NDLPIQEDAKADVCRKELIIKVL*EGNRSQ
Trigger: CTGGCTTCTGTTTCCCTCCAACAATACTTTTATTAT...CAACTCCTTTCTGCAGACGTCTGCCTTGGCATCCTCTTGAATAGGAAGATCGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CAA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTTCATTCACCTCCAATTaGACTCCTGTGTCTCCTGCT +
Preference number: 5 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSSFTSN*TPVSPA
Trigger: AGCAGGAGACACAGGAGTCAAATTGGAGGTGAATGA...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS-3UTR CAA 90 bp TTAAACTCCTTGCTCAGATATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTTTCCGGGTTTGTCAATaGCGTAGAAGGTGGAACGAT +
Preference number: 5 (lower is better)
Translates to: LNSLLRYKITLPRWLFSSFRVCQ*RRRWND
Trigger: ATCGTTCCACCTTCTACGCAATTGACAAACCCGGAA...AGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATATCTGAGCAAGGAGTTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000434438.6
CDS-3UTR CAA 90 bp TATAAAATAACCCTGCCAAGATGGCTCTTCTCTTCTATTTCTTTCTCTCTCTCTCTTGGAAAGCCAATGTaGGAACTGGAGGCTTTCCCT +
Preference number: 5 (lower is better)
Translates to: YKITLPRWLFSSISFSLSLGKPM*ELEAFP
Trigger: AGGGAAAGCCTCCAGTTCCAACATTGGCTTTCCAAG...AGAGAGAGAGAAAGAAATAGAAGAGAAGAGCCATCTTGGCAGGGTTATTTTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336926.11
CDS CAA 72 bp CCGACCCCGCGCCGGCTCAGCACCTTGGGCAGTGGGTaGGGCACCTGCTTCATGGAGCTGGCCATCCGATCC +
Preference number: 6 (lower is better)
Translates to: PTPRRLSTLGSG*GTCFMELAIRS
Trigger: GGATCGGATGGCCAGCTCCATGAAGCAGGTGCCCAACCCACTGCCCAAGGTGCTGAGCCGGCGCGGGGTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000479835.1
ENST00000485723.1
CDS GCA 72 bp TCACAGTCGTCGGCCGCCTGCTGCCGCAGGTGCTGCTaGTCGGCCAGATCTGCTTCCAGCTCGCTGACGTGG +
Preference number: 6 (lower is better)
Translates to: SQSSAACCRRCC*SARSASSSLTW
Trigger: CCACGTCAGCGAGCTGGAAGCAGATCTGGCCGAGCAGCAGCACCTGCGGCAGCAGGCGGCCGACGACTGTGA
68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000404944.3
ENST00000434438.6
ENST00000616821.4
CDS CCA 72 bp CGACCCCGCGCCGGCTCAGCACCTTGGGCAGTGGGTTaGGCACCTGCTTCATGGAGCTGGCCATCCGATCCA +
Preference number: 6 (lower is better)
Translates to: RPRAGSAPWAVG*APASWSWPSDP
Trigger: TGGATCGGATGGCCAGCTCCATGAAGCAGGTGCCCAACCCACTGCCCAAGGTGCTGAGCCGGCGCGGGGTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000479835.1
ENST00000485723.1
CDS TCA 72 bp GGTGCTGCTGCTCGGCCAGATCTGCTTCCAGCTCGCTaGCGTGGCCCTTCAGCTGCAGCACAACCCGCTGGC +
Preference number: 6 (lower is better)
Translates to: GAAARPDLLPAR*RGPSAAAQPAG
Trigger: GCCAGCGGGTTGTGCTGCAGCTGAAGGGCCACGTCAGCGAGCTGGAAGCAGATCTGGCCGAGCAGCAGCACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000404944.3
ENST00000434438.6
ENST00000616821.4
CDS TCA 72 bp GTCTCCCCTGAAAGGGTGGCATTGTCCACCACTTCCTaGCCCAGCAGGCCCTCGTGTCCCCGGCTGGTTCCG +
Preference number: 6 (lower is better)
Translates to: VSPERVALSTTS*PSRPSCPRLVP
Trigger: CGGAACCAGCCGGGGACACGAGGGCCTGCTGGGTCAGGAAGTGGTGGACAATGCCACCCTTTCAGGGGAGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000420909.1
CDS GCA 72 bp AATTCACAGTCGTCGGCCGCCTGCTGCCGCAGGTGCTaGTGCTCGGCCAGATCTGCTTCCAGCTCGCTGACG +
Preference number: 6 (lower is better)
Translates to: NSQSSAACCRRC*CSARSASSSLT
Trigger: CGTCAGCGAGCTGGAAGCAGATCTGGCCGAGCAGCAGCACCTGCGGCAGCAGGCGGCCGACGACTGTGAATT
65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000404944.3
ENST00000434438.6
ENST00000616821.4
CDS GCA 72 bp AGTTCTGCCCGCAGGAATTCACAGTCGTCGGCCGCCTaGTGCCGCAGGTGCTGCTGCTCGGCCAGATCTGCT +
Preference number: 6 (lower is better)
Translates to: SSARRNSQSSAA*CRRCCCSARSA
Trigger: AGCAGATCTGGCCGAGCAGCAGCACCTGCGGCAGCAGGCGGCCGACGACTGTGAATTCCTGCGGGCAGAACT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000404944.3
ENST00000434438.6
ENST00000616821.4
CDS GCA 72 bp CCGGCAGTGGCCTGGTTCACTCCCCGAGAGGCCTGCTaGAGCTGGGCTAGGTTGGGGCTGTCCTTATCAGCT +
Preference number: 6 (lower is better)
Translates to: PAVAWFTPREAC*SWARLGLSLSA
Trigger: AGCTGATAAGGACAGCCCCAACCTAGCCCAGCTGCAGCAGGCCTCTCGGGGAGTGAACCAGGCCACTGCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS GCA 72 bp ACGCCGGCAGTGGCCTGGTTCACTCCCCGAGAGGCCTaGTGCAGCTGGGCTAGGTTGGGGCTGTCCTTATCA +
Preference number: 6 (lower is better)
Translates to: TPAVAWFTPREA*CSWARLGLSLS
Trigger: TGATAAGGACAGCCCCAACCTAGCCCAGCTGCAGCAGGCCTCTCGGGGAGTGAACCAGGCCACTGCCGGCGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS CCA 72 bp TCAGCACCTTGGGCAGTGGGTTGGGCACCTGCTTCATaGAGCTGGCCATCCGATCCATGTCGCCGCGAGGAG +
Preference number: 6 (lower is better)
Translates to: SAPWAVGWAPAS*SWPSDPCRREE
Trigger: CTCCTCGCGGCGACATGGATCGGATGGCCAGCTCCATGAAGCAGGTGCCCAACCCACTGCCCAAGGTGCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000479835.1
ENST00000485723.1
CDS CCA 72 bp TGCTGCTCGGCCAGATCTGCTTCCAGCTCGCTGACGTaGCCCTTCAGCTGCAGCACAACCCGCTGGCTCTCA +
Preference number: 6 (lower is better)
Translates to: CCSARSASSSLT*PFSCSTTRWLS
Trigger: TGAGAGCCAGCGGGTTGTGCTGCAGCTGAAGGGCCACGTCAGCGAGCTGGAAGCAGATCTGGCCGAGCAGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000404944.3
ENST00000434438.6
ENST00000616821.4
CDS CCA 72 bp GTGGCCTGGTTCACTCCCCGAGAGGCCTGCTGCAGCTaGGCTAGGTTGGGGCTGTCCTTATCAGCTTTCACC +
Preference number: 6 (lower is better)
Translates to: VAWFTPREACCS*ARLGLSLSAFT
Trigger: GGTGAAAGCTGATAAGGACAGCCCCAACCTAGCCCAGCTGCAGCAGGCCTCTCGGGGAGTGAACCAGGCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS CCA 72 bp ATTTGCCGGAAATGGTTGAGGCCACAACGCCGGCAGTaGCCTGGTTCACTCCCCGAGAGGCCTGCTGCAGCT +
Preference number: 6 (lower is better)
Translates to: ICRKWLRPQRRQ*PGSLPERPAAA
Trigger: AGCTGCAGCAGGCCTCTCGGGGAGTGAACCAGGCCACTGCCGGCGTTGTGGCCTCAACCATTTCCGGCAAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS CCA 72 bp GGAACACACCAAGGGTCTGGTTGGAGATGGGTGCAGTaGCTGGGCCATGAGGCAGGTCAGTGGTGCCTCCTC +
Preference number: 6 (lower is better)
Translates to: GTHQGSGWRWVQ*LGHEAGQWCLL
Trigger: GAGGAGGCACCACTGACCTGCCTCATGGCCCAGCCACTGCACCCATCTCCAACCAGACCCTTGGTGTGTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479835.1
CDS CCA 72 bp GACCCAGCGCAGCTGATGAGAGGAGGTTCTTCAAGCTaGTTCAGGGCGTCTTGTATCACCTGCTCCGCAGCC +
Preference number: 6 (lower is better)
Translates to: DPAQLMRGGSSS*FRASCITCSAA
Trigger: GGCTGCGGAGCAGGTGATACAAGACGCCCTGAACCAGCTTGAAGAACCTCCTCTCATCAGCTGCGCTGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS CAA 72 bp CCAGCCTCGTCCAGCTGGCGGTCACTCATCTGCAGGTaGCCTGGGAACCTGGGATTTTTGGTGTGGTACTCC +
Preference number: 6 (lower is better)
Translates to: PASSSWRSLICR*PGNLGFLVWYS
Trigger: GGAGTACCACACCAAAAATCCCAGGTTCCCAGGCAACCTGCAGATGAGTGACCGCCAGCTGGACGAGGCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000420909.1
ENST00000434438.6
ENST00000616821.4
CDS CAA 90 bp AGCGCAGCTGATGAGAGGAGGTTCTTCAAGCTGGTTCAGGGCGTCTaGTATCACCTGCTCCGCAGCCTTCCTGGACCCCACCAGAAGCAT +
Preference number: 6 (lower is better)
Translates to: SAADERRFFKLVQGV*YHLLRSLPGPHQKH
Trigger: ATGCTTCTGGTGGGGTCCAGGAAGGCTGCGGAGCAGGTGATACAAGACGCCCTGAACCAGCTTGAAGAACCTCCTCTCATCAGCTGCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS GCA 72 bp CAGCCTCGTCCAGCTGGCGGTCACTCATCTGCAGGTTaGCTGGGAACCTGGGATTTTTGGTGTGGTACTCCA +
Preference number: 6 (lower is better)
Translates to: QPRPAGGHSSAG*LGTWDFWCGTP
Trigger: TGGAGTACCACACCAAAAATCCCAGGTTCCCAGGCAACCTGCAGATGAGTGACCGCCAGCTGGACGAGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000420909.1
ENST00000434438.6
ENST00000616821.4
CDS GCA 72 bp CTTTCTCCAGCCTCGTCCAGCTGGCGGTCACTCATCTaGAGGTTGCCTGGGAACCTGGGATTTTTGGTGTGG +
Preference number: 6 (lower is better)
Translates to: LSPASSSWRSLI*RLPGNLGFLVW
Trigger: CCACACCAAAAATCCCAGGTTCCCAGGCAACCTGCAGATGAGTGACCGCCAGCTGGACGAGGCTGGAGAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS CCA 72 bp GCGTCGCTGGTCAAGTGGGCCAGCAGGGTTATGGAATaGAGAAGTCCACTGATGTCTTCTGGGCAGGCCAGA +
Preference number: 6 (lower is better)
Translates to: ASLVKWASRVME*RSPLMSSGQAR
Trigger: TCTGGCCTGCCCAGAAGACATCAGTGGACTTCTCCATTCCATAACCCTGCTGGCCCACTTGACCAGCGACGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS CCA 72 bp TCCTGGAGGAGGCTGGCAGGAGTAGGTATGCAAGGCTaGTCTGAGGGTATAGACGCCAGGACAGAAGAAGGC +
Preference number: 6 (lower is better)
Translates to: SWRRLAGVGMQG*SEGIDARTEEG
Trigger: GCCTTCTTCTGTCCTGGCGTCTATACCCTCAGACCAGCCTTGCATACCTACTCCTGCCAGCCTCCTCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000479835.1
CDS CAA 90 bp AGTCCATGTTGTCTGTCTCTTCGATCTGTGATTTGCCGGAAATGGTaGAGGCCACAACGCCGGCAGTGGCCTGGTTCACTCCCCGAGAGG +
Preference number: 6 (lower is better)
Translates to: SPCCLSLRSVICRKW*RPQRRQWPGSLPER
Trigger: CCTCTCGGGGAGTGAACCAGGCCACTGCCGGCGTTGTGGCCTCAACCATTTCCGGCAAATCACAGATCGAAGAGACAGACAACATGGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS TCA 72 bp AGTCACACAGGACCTAAGACCAAGCCGTGTCTCCCCTaGAAGGGTGGCATTGTCCACCACTTCCTGACCCAG +
Preference number: 6 (lower is better)
Translates to: SHTGPKTKPCLP*KGGIVHHFLTQ
Trigger: CTGGGTCAGGAAGTGGTGGACAATGCCACCCTTTCAGGGGAGACACGGCTTGGTCTTAGGTCCTGTGTGACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000420909.1
CDS GCA 72 bp ACTCCATCTTGGTTCTTAGCAGTTTCAGGTAGATGCTaGACAGCTGGCCATACCCCTCGCTCAGGTGGCCCC +
Preference number: 6 (lower is better)
Translates to: TPSWFLAVSGRC*TAGHTPRSGGP
Trigger: GGGGCCACCTGAGCGAGGGGTATGGCCAGCTGTGCAGCATCTACCTGAAACTGCTAAGAACCAAGATGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000420909.1
ENST00000434438.6
ENST00000616821.4
CDS GCA 72 bp AGATCTGCTTCCAGCTCGCTGACGTGGCCCTTCAGCTaGAGCACAACCCGCTGGCTCTCAGTCTTCATGTTT +
Preference number: 6 (lower is better)
Translates to: RSASSSLTWPFS*STTRWLSVFMF
Trigger: AAACATGAAGACTGAGAGCCAGCGGGTTGTGCTGCAGCTGAAGGGCCACGTCAGCGAGCTGGAAGCAGATCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000404944.3
ENST00000434438.6
ENST00000616821.4
CDS GCA 72 bp CCCAGTTTGCTTCTGACTGGGCAGAAGTTTCCAGGCTaGCTTGCAGAACCTGAAGCTCCCGTTGGCTTGTGG +
Preference number: 6 (lower is better)
Translates to: PSLLLTGQKFPG*LAEPEAPVGLW
Trigger: CCACAAGCCAACGGGAGCTTCAGGTTCTGCAAGGCAGCCTGGAAACTTCTGCCCAGTCAGAAGCAAACTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS GCA 72 bp GGTTCTTCAAGCTGGTTCAGGGCGTCTTGTATCACCTaGTCCGCAGCCTTCCTGGACCCCACCAGAAGCATT +
Preference number: 6 (lower is better)
Translates to: GSSSWFRASCIT*SAAFLDPTRSI
Trigger: AATGCTTCTGGTGGGGTCCAGGAAGGCTGCGGAGCAGGTGATACAAGACGCCCTGAACCAGCTTGAAGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS GCA 72 bp GGGCAGGCCAGATACTGGCTCCAGCTTTTCTCCAGTTaGTCGATGCAGCTGGAAATGGATGTGACCGTGGAG +
Preference number: 6 (lower is better)
Translates to: GQARYWLQLFSS*SMQLEMDVTVE
Trigger: CTCCACGGTCACATCCATTTCCAGCTGCATCGAGCAACTGGAGAAAAGCTGGAGCCAGTATCTGGCCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS CAA 72 bp CAGCAGAGCACTGCGTTGCTAGACAGAGGCAGGCGGTaGACAACAGACCAGAAGGTCTGTGCCCCTTTCTCA +
Preference number: 6 (lower is better)
Translates to: QQSTALLDRGRR*TTDQKVCAPFS
Trigger: TGAGAAAGGGGCACAGACCTTCTGGTCTGTTGTCAACCGCCTGCCTCTGTCTAGCAACGCAGTGCTCTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000420909.1
ENST00000434438.6
ENST00000616821.4
CDS CAA 90 bp GATGTCTTCTGGGCAGGCCAGATACTGGCTCCAGCTTTTCTCCAGTaGCTCGATGCAGCTGGAAATGGATGTGACCGTGGAGAGGAGGTG +
Preference number: 6 (lower is better)
Translates to: DVFWAGQILAPAFLQ*LDAAGNGCDRGEEV
Trigger: CACCTCCTCTCCACGGTCACATCCATTTCCAGCTGCATCGAGCAACTGGAGAAAAGCTGGAGCCAGTATCTGGCCTGCCCAGAAGACATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS TCA 72 bp TTTTCTCCAGTTGCTCGATGCAGCTGGAAATGGATGTaGCCGTGGAGAGGAGGTGATCTGCAGACCCAGCGC +
Preference number: 6 (lower is better)
Translates to: FSPVARCSWKWM*PWRGGDLQTQR
Trigger: GCGCTGGGTCTGCAGATCACCTCCTCTCCACGGTCACATCCATTTCCAGCTGCATCGAGCAACTGGAGAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS TCA 72 bp GTCTCTGGAGGGGGCTCTGGGTTAGGGAACATCATCTaGGAACAGGCTGTTCTCTGGACTTCCCTGGAGTCA +
Preference number: 6 (lower is better)
Translates to: VSGGGSGLGNII*EQAVLWTSLES
Trigger: TGACTCCAGGGAAGTCCAGAGAACAGCCTGTTCTCAGATGATGTTCCCTAACCCAGAGCCCCCTCCAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000420909.1
CDS GCA 72 bp GGTACTCCATCTTGGTTCTTAGCAGTTTCAGGTAGATaGTGCACAGCTGGCCATACCCCTCGCTCAGGTGGC +
Preference number: 6 (lower is better)
Translates to: GTPSWFLAVSGR*CTAGHTPRSGG
Trigger: GCCACCTGAGCGAGGGGTATGGCCAGCTGTGCAGCATCTACCTGAAACTGCTAAGAACCAAGATGGAGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000420909.1
ENST00000434438.6
ENST00000616821.4
CDS CCA 72 bp CTCGTCCAGCTGGCGGTCACTCATCTGCAGGTTGCCTaGGAACCTGGGATTTTTGGTGTGGTACTCCATCTT +
Preference number: 6 (lower is better)
Translates to: LVQLAVTHLQVA*EPGIFGVVLHL
Trigger: AAGATGGAGTACCACACCAAAAATCCCAGGTTCCCAGGCAACCTGCAGATGAGTGACCGCCAGCTGGACGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000420909.1
ENST00000434438.6
ENST00000616821.4
CDS CCA 72 bp TCAGGGCGTCTTGTATCACCTGCTCCGCAGCCTTCCTaGACCCCACCAGAAGCATTTTTCGTTGGTCTTTGG +
Preference number: 6 (lower is better)
Translates to: SGRLVSPAPQPS*TPPEAFFVGLW
Trigger: CCAAAGACCAACGAAAAATGCTTCTGGTGGGGTCCAGGAAGGCTGCGGAGCAGGTGATACAAGACGCCCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS CAA 72 bp TGGGCAGGCCAGATACTGGCTCCAGCTTTTCTCCAGTaGCTCGATGCAGCTGGAAATGGATGTGACCGTGGA +
Preference number: 6 (lower is better)
Translates to: WAGQILAPAFLQ*LDAAGNGCDRG
Trigger: TCCACGGTCACATCCATTTCCAGCTGCATCGAGCAACTGGAGAAAAGCTGGAGCCAGTATCTGGCCTGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS CAA 72 bp TGTCTGTCTCTTCGATCTGTGATTTGCCGGAAATGGTaGAGGCCACAACGCCGGCAGTGGCCTGGTTCACTC +
Preference number: 6 (lower is better)
Translates to: CLSLRSVICRKW*RPQRRQWPGSL
Trigger: GAGTGAACCAGGCCACTGCCGGCGTTGTGGCCTCAACCATTTCCGGCAAATCACAGATCGAAGAGACAGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS TCA 72 bp TCTCTCTGGAGGTCCTTAGAGGCCACGATGAGCACCTaGATAGCTTGCATGAGGCTGGTACAGCAACCAAGG +
Preference number: 6 (lower is better)
Translates to: SLWRSLEATMST*IACMRLVQQPR
Trigger: CCTTGGTTGCTGTACCAGCCTCATGCAAGCTATTCAGGTGCTCATCGTGGCCTCTAAGGACCTCCAGAGAGA
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000616821.4
CDS GCA 72 bp CGGCTTCAGAGTGAGAGAGGAATACGGGGAGGTGACTaGAAAACTCGGTTAAGAACAGGGCTCCGTGACTTC +
Preference number: 6 (lower is better)
Translates to: RLQSERGIRGGD*KTRLRTGLRDF
Trigger: GAAGTCACGGAGCCCTGTTCTTAACCGAGTTTTGCAGTCACCTCCCCGTATTCCTCTCTCACTCTGAAGCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000485723.1
CDS CCA 72 bp GGCTGCCTTGCAGAACCTGAAGCTCCCGTTGGCTTGTaGCAAGTTCCTGCTTCAAGCTCTCTAGAACTTCCA +
Preference number: 6 (lower is better)
Translates to: GCLAEPEAPVGL*QVPASSSLELP
Trigger: TGGAAGTTCTAGAGAGCTTGAAGCAGGAACTTGCCACAAGCCAACGGGAGCTTCAGGTTCTGCAAGGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS CCA 72 bp TGTTGTCTGTCTCTTCGATCTGTGATTTGCCGGAAATaGTTGAGGCCACAACGCCGGCAGTGGCCTGGTTCA +
Preference number: 6 (lower is better)
Translates to: CCLSLRSVICRK*LRPQRRQWPGS
Trigger: TGAACCAGGCCACTGCCGGCGTTGTGGCCTCAACCATTTCCGGCAAATCACAGATCGAAGAGACAGACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS GCA 72 bp AGAAGTCCATGTTGTCTGTCTCTTCGATCTGTGATTTaGCGGAAATGGTTGAGGCCACAACGCCGGCAGTGG +
Preference number: 6 (lower is better)
Translates to: RSPCCLSLRSVI*RKWLRPQRRQW
Trigger: CCACTGCCGGCGTTGTGGCCTCAACCATTTCCGGCAAATCACAGATCGAAGAGACAGACAACATGGACTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS GCA 72 bp GGCTACAGGTTCTTTCCACGGCTCTGTGCTGCCTCTTaGTGTCCTGTTATACAATCCAGTGGTCTGGAGTTC +
Preference number: 6 (lower is better)
Translates to: GYRFFPRLCAAS*CPVIQSSGLEF
Trigger: GAACTCCAGACCACTGGATTGTATAACAGGACAGCAAGAGGCAGCACAGAGCCGTGGAAAGAACCTGTAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485723.1
CDS CCA 72 bp TCTCTCGTTCCAAATCTACCTGGGCTTGTCTGGCCATaGACACCTGTTTGGTCACCTCTGCATTCTTCCGCA +
Preference number: 6 (lower is better)
Translates to: SLVPNLPGLVWP*TPVWSPLHSSA
Trigger: TGCGGAAGAATGCAGAGGTGACCAAACAGGTGTCCATGGCCAGACAAGCCCAGGTAGATTTGGAACGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS CAA 72 bp TTCCTGGACCCCACCAGAAGCATTTTTCGTTGGTCTTaGGCAAGCTGGCACATAGATTCCTCTGTGCTGGCC +
Preference number: 6 (lower is better)
Translates to: FLDPTRSIFRWS*ASWHIDSSVLA
Trigger: GGCCAGCACAGAGGAATCTATGTGCCAGCTTGCCAAAGACCAACGAAAAATGCTTCTGGTGGGGTCCAGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS CAA 72 bp GAGGTCCTTAGAGGCCACGATGAGCACCTGAATAGCTaGCATGAGGCTGGTACAGCAACCAAGGATCCTTTC +
Preference number: 6 (lower is better)
Translates to: EVLRGHDEHLNS*HEAGTATKDPF
Trigger: GAAAGGATCCTTGGTTGCTGTACCAGCCTCATGCAAGCTATTCAGGTGCTCATCGTGGCCTCTAAGGACCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000616821.4
CDS CAA 90 bp CTCTCTCTGGAGGTCCTTAGAGGCCACGATGAGCACCTGAATAGCTaGCATGAGGCTGGTACAGCAACCAAGGATCCTTTCATTCACCTC +
Preference number: 6 (lower is better)
Translates to: LSLEVLRGHDEHLNS*HEAGTATKDPFIHL
Trigger: GAGGTGAATGAAAGGATCCTTGGTTGCTGTACCAGCCTCATGCAAGCTATTCAGGTGCTCATCGTGGCCTCTAAGGACCTCCAGAGAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000616821.4
CDS CAA 90 bp TGCCTCTTGCTGTCCTGTTATACAATCCAGTGGTCTGGAGTTCATTaGGCCATCCATCCAACCAACCAGGCCAACCTTCACTCGGTACCA +
Preference number: 6 (lower is better)
Translates to: CLLLSCYTIQWSGVH*AIHPTNQANLHSVP
Trigger: TGGTACCGAGTGAAGGTTGGCCTGGTTGGTTGGATGGATGGCCAAATGAACTCCAGACCACTGGATTGTATAACAGGACAGCAAGAGGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485723.1
CDS CCA 72 bp CCCACCAGAAGCATTTTTCGTTGGTCTTTGGCAAGCTaGCACATAGATTCCTCTGTGCTGGCCAGTTTGAGC +
Preference number: 6 (lower is better)
Translates to: PTRSIFRWSLAS*HIDSSVLASLS
Trigger: GCTCAAACTGGCCAGCACAGAGGAATCTATGTGCCAGCTTGCCAAAGACCAACGAAAAATGCTTCTGGTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS CAA 72 bp TGGCTACAGGTTCTTTCCACGGCTCTGTGCTGCCTCTaGCTGTCCTGTTATACAATCCAGTGGTCTGGAGTT +
Preference number: 6 (lower is better)
Translates to: WLQVLSTALCCL*LSCYTIQWSGV
Trigger: AACTCCAGACCACTGGATTGTATAACAGGACAGCAAGAGGCAGCACAGAGCCGTGGAAAGAACCTGTAGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485723.1
CDS TCA 72 bp TGTCAAATAAATTCTGCTGAGAGGCATCCATGTCCATaGGGTCATCCTTCTCTAGGACTGGCTCGCTGTCGG +
Preference number: 6 (lower is better)
Translates to: CQINSAERHPCP*GHPSLGLARCR
Trigger: CCGACAGCGAGCCAGTCCTAGAGAAGGATGACCTCATGGACATGGATGCCTCTCAGCAGAATTTATTTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000404944.3
ENST00000434438.6
ENST00000616821.4
CDS GCA 72 bp CCTTTCATTCACCTCCAATTTGACTCCTGTGTCTCCTaGTCGGGATTTGCTGAGCATCTCCTCTATTCTGGC +
Preference number: 6 (lower is better)
Translates to: PFIHLQFDSCVS*SGFAEHLLYSG
Trigger: GCCAGAATAGAGGAGATGCTCAGCAAATCCCGAGCAGGAGACACAGGAGTCAAATTGGAGGTGAATGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336926.11
ENST00000616821.4
CDS CCA 72 bp CTGTGCTGCCTCTTGCTGTCCTGTTATACAATCCAGTaGTCTGGAGTTCATTTGGCCATCCATCCAACCAAC +
Preference number: 6 (lower is better)
Translates to: LCCLLLSCYTIQ*SGVHLAIHPTN
Trigger: GTTGGTTGGATGGATGGCCAAATGAACTCCAGACCACTGGATTGTATAACAGGACAGCAAGAGGCAGCACAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485723.1
CDS CAA 72 bp TCCTTTACAGCCACTTCCTGCGTATTAATGGCCTTATaGATGCTGACAGTCTCTGGAGGGGGCTCTGGGTTA +
Preference number: 6 (lower is better)
Translates to: SFTATSCVLMAL*MLTVSGGGSGL
Trigger: TAACCCAGAGCCCCCTCCAGAGACTGTCAGCATCAATAAGGCCATTAATACGCAGGAAGTGGCTGTAAAGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420909.1
ENST00000616821.4
CDS CAA 72 bp CTGTCCTGTTATACAATCCAGTGGTCTGGAGTTCATTaGGCCATCCATCCAACCAACCAGGCCAACCTTCAC +
Preference number: 6 (lower is better)
Translates to: LSCYTIQWSGVH*AIHPTNQANLH
Trigger: GTGAAGGTTGGCCTGGTTGGTTGGATGGATGGCCAAATGAACTCCAGACCACTGGATTGTATAACAGGACAG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485723.1
CDS CAA 90 bp CAAATGTTATGGCTACAGGTTCTTTCCACGGCTCTGTGCTGCCTCTaGCTGTCCTGTTATACAATCCAGTGGTCTGGAGTTCATTTGGCC +
Preference number: 6 (lower is better)
Translates to: QMLWLQVLSTALCCL*LSCYTIQWSGVHLA
Trigger: GGCCAAATGAACTCCAGACCACTGGATTGTATAACAGGACAGCAAGAGGCAGCACAGAGCCGTGGAAAGAACCTGTAGCCATAACATTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485723.1
CDS TCA 72 bp TGGCACATAGATTCCTCTGTGCTGGCCAGTTTGAGCTaGGTGTCCTGCAGTTCTTTCCGAAGAGCAGATAAT +
Preference number: 6 (lower is better)
Translates to: WHIDSSVLASLS*VSCSSFRRADN
Trigger: ATTATCTGCTCTTCGGAAAGAACTGCAGGACACTCAGCTCAAACTGGCCAGCACAGAGGAATCTATGTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS GCA 72 bp ATGTTATGGCTACAGGTTCTTTCCACGGCTCTGTGCTaGCTCTTGCTGTCCTGTTATACAATCCAGTGGTCT +
Preference number: 6 (lower is better)
Translates to: MLWLQVLSTALC*LLLSCYTIQWS
Trigger: AGACCACTGGATTGTATAACAGGACAGCAAGAGGCAGCACAGAGCCGTGGAAAGAACCTGTAGCCATAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000485723.1
CDS GCA 72 bp GGTTCTGAACCAGCTCGCTGTACTTCTCCTTTAGCTTaGTATATCGCTGTTCATTGGCTTGAGCTTTCCTTT +
Preference number: 6 (lower is better)
Translates to: GSEPARCTSPLA*YIAVHWLELSF
Trigger: AAAGGAAAGCTCAAGCCAATGAACAGCGATATAGCAAGCTAAAGGAGAAGTACAGCGAGCTGGTTCAGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS GCA 72 bp CACGTTCTGGCGTGTTTTTCCTTTACAGCCACTTCCTaGGTATTAATGGCCTTATTGATGCTGACAGTCTCT +
Preference number: 6 (lower is better)
Translates to: HVLACFSFTATS*VLMALLMLTVS
Trigger: AGAGACTGTCAGCATCAATAAGGCCATTAATACGCAGGAAGTGGCTGTAAAGGAAAAACACGCCAGAACGTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000420909.1
ENST00000616821.4
CDS TCA 72 bp CAGTCTTCATGTTTTCTAGCTGTGCCTTCAATCCACTaGTCTCTCTGTATAGTCGCTCAATTAAGTGGTCCT +
Preference number: 6 (lower is better)
Translates to: QSSCFLAVPSIH*SLCIVAQLSGP
Trigger: AGGACCACTTAATTGAGCGACTATACAGAGAGATCAGTGGATTGAAGGCACAGCTAGAAAACATGAAGACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000404944.3
ENST00000434438.6
ENST00000616821.4
CDS CAA 72 bp GTAACAAGGATTTACACTGACATATGGGGTGTTGGTTaGGCTCTATTCTTTTTCGGTTACCACTTCTTGCAG +
Preference number: 6 (lower is better)
Translates to: VTRIYTDIWGVG*ALFFFGYHFLQ
Trigger: CTGCAAGAAGTGGTAACCGAAAAAGAATAGAGCCAAACCAACACCCCATATGTCAGTGTAAATCCTTGTTAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS TCA 72 bp AATAACACACACGAGATAGGTAACAAGGATTTACACTaGCATATGGGGTGTTGGTTTGGCTCTATTCTTTTT +
Preference number: 6 (lower is better)
Translates to: NNTHEIGNKDLH*HMGCWFGSILF
Trigger: AAAAAGAATAGAGCCAAACCAACACCCCATATGTCAGTGTAAATCCTTGTTACCTATCTCGTGTGTGTTATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336926.11
ENST00000434438.6
ENST00000616821.4
CDS TCA 72 bp ATTTTGACTGTTGAAATTGAAGGGATCACTGCTGAATaGACTGCCAAAGATGTCATCAAACTTGTTGTCAAA +
Preference number: 6 (lower is better)
Translates to: ILTVEIEGITAE*TAKDVIKLVVK
Trigger: TTTGACAACAAGTTTGATGACATCTTTGGCAGTTCATTCAGCAGTGATCCCTTCAATTTCAACAGTCAAAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336926.11
ENST00000404944.3
ENST00000434438.6
ENST00000616821.4