RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HINFP (Homo sapiens)

Ensembl gene IDs: ENSG00000172273

Ensembl transcript IDs: ENST00000350777.7, ENST00000527206.1, ENST00000527354.5, ENST00000527410.3, ENST00000527755.5, ENST00000529354.1, ENST00000529610.1, ENST00000529808.1, ENST00000529988.5, ENST00000530678.1, ENST00000531022.5, ENST00000531360.5, ENST00000532312.2, ENST00000532860.1

Found 334 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCATCCATTGGCAACGGCTGCCCACTAGGGGCACTGCCACTTGCCTaGCTCAAACTTCAGGACCTGGGGAAGAAATGGTCTGGCTCTGCG +
Preference number: 1 (lower is better)
Translates to: ASIGNGCPLGALPLA*LKLQDLGKKWSGSA
Trigger: CGCAGAGCCAGACCATTTCTTCCCCAGGTCCTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAATGGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR CCA 90 bp AGAGTGGACCACACTGCTCTCGGCACCACTCCTAAAGGCATCCATTaGCAACGGCTGCCCACTAGGGGCACTGCCACTTGCCTGGCTCAA +
Preference number: 1 (lower is better)
Translates to: RVDHTALGTTPKGIH*QRLPTRGTATCLAQ
Trigger: TTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAATGGATGCCTTTAGGAGTGGTGCCGAGAGCAGTGTGGTCCACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR GCA 90 bp ACACTGCTCTCGGCACCACTCCTAAAGGCATCCATTGGCAACGGCTaGCCACTAGGGGCACTGCCACTTGCCTGGCTCAAACTTCAGGAC +
Preference number: 1 (lower is better)
Translates to: TLLSAPLLKASIGNG*PLGALPLAWLKLQD
Trigger: GTCCTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAATGGATGCCTTTAGGAGTGGTGCCGAGAGCAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR GCA 90 bp TCCTTACGTCCTGGCTCCCCTGGCACTGTTTCTAGAATAATGCCCTaGAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCT +
Preference number: 1 (lower is better)
Translates to: SLRPGSPGTVSRIMP*RLLSFSDVPRPDPS
Trigger: AGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAGGGCATTATTCTAGAAACAGTGCCAGGGGAGCCAGGACGTAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527410.3
3UTR GCA 90 bp AAAGGCATCCATTGGCAACGGCTGCCCACTAGGGGCACTGCCACTTaGCTGGCTCAAACTTCAGGACCTGGGGAAGAAATGGTCTGGCTC +
Preference number: 1 (lower is better)
Translates to: KGIHWQRLPTRGTAT*LAQTSGPGEEMVWL
Trigger: GAGCCAGACCATTTCTTCCCCAGGTCCTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAATGGATGCCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR TCA 90 bp CATGCCATCCTTGGGCCTAAGGAGCCCGAAAGATGGGAATGGATGTaGGCTAAGGATTTAATCACTGTCAAGCAGATCTTGAGGGTTATG +
Preference number: 1 (lower is better)
Translates to: HAILGPKEPERWEWM*AKDLITVKQILRVM
Trigger: CATAACCCTCAAGATCTGCTTGACAGTGATTAAATCCTTAGCTCACATCCATTCCCATCTTTCGGGCTCCTTAGGCCCAAGGATGGCATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR CCA 90 bp AGTCCTTGGGGTTGTAGAGGAAACCTTAAGAGGAAAATGGCTACTTaGTTATCAATGCCTTGGCTGGTGACAAAGAAAGGACCCTTGCAG +
Preference number: 1 (lower is better)
Translates to: SPWGCRGNLKRKMAT*LSMPWLVTKKGPLQ
Trigger: CTGCAAGGGTCCTTTCTTTGTCACCAGCCAAGGCATTGATAACCAAGTAGCCATTTTCCTCTTAAGGTTTCCTCTACAACCCCAAGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR CCA 90 bp CTCAATGCCTCCAATCCTGTCCCTGAGGATAATCATGAAAGTCCTTaGGGTTGTAGAGGAAACCTTAAGAGGAAAATGGCTACTTGGTTA +
Preference number: 1 (lower is better)
Translates to: LNASNPVPEDNHESP*GCRGNLKRKMATWL
Trigger: TAACCAAGTAGCCATTTTCCTCTTAAGGTTTCCTCTACAACCCCAAGGACTTTCATGATTATCCTCAGGGACAGGATTGGAGGCATTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR-3UTR CCA 90 bp CCTTGCAGGGACCAGTCACATGCCATCCTTGGGCCTAAGGAGCCCGAAAGATGGAAACCCAGGCCAGAGTaGACCACACTGCTCTCGGCA +
Preference number: 2 (lower is better)
Translates to: PCRDQSHAILGPKEPERWKPRPE*TTLLSA
Trigger: TGCCGAGAGCAGTGTGGTCCACTCTGGCCTGGGTTT...CCATCTTTCGGGCTCCTTAGGCCCAAGGATGGCATGTGACTGGTCCCTGCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR-3UTR CCA 90 bp GCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGAAGACAACAGGACAGCCTAAAGGCATCCATTaGCAACGGCTGCCCACTAGG +
Preference number: 2 (lower is better)
Translates to: ALRIAKFHQGEEEKTTGQPKGIH*QRLPTR
Trigger: CCTAGTGGGCAGCCGTTGCCAATGGATGCCTTTAGG...CTGTCCTGTTGTCTTCTCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR-3UTR TCA 90 bp ACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGCTCCCCACAAAATTAGAGTCTGCAGAATaGTGCAAACCCAGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: THIQDPLKESRVLRLPTKLESAE*CKPRPE
Trigger: CTCTGGCCTGGGTTTGCATCATTCTGCAGACTCTAA...TTTTGTGGGGAGCCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR-3UTR GCA 90 bp CATTCAGACACACAATTTTCTAGTTTGGTTCCTGGACCACTTGATTGCCTCCCTTCCATTGGCAACGGCTaGCCACTAGGGGCACTGCCA +
Preference number: 2 (lower is better)
Translates to: HSDTQFSSLVPGPLDCLPSIGNG*PLGALP
Trigger: TGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAATGGA...AGGGAGGCAATCAAGTGGTCCAGGAACCAAACTAGAAAATTGTGTGTCTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR-3UTR CCA 90 bp TTTAACAAGAACACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGGCACTGCCACTTGCCTaGCTCAAACTTCAGGACCTG +
Preference number: 2 (lower is better)
Translates to: FNKNTHIQDPLKESRVLRALPLA*LKLQDL
Trigger: CAGGTCCTGAAGTTTGAGCCAGGCAAGTGGCAGTGC...CCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGTGTTCTTGTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR-3UTR CCA 90 bp CATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGATCAAACTTCAGGACCTaGGGAAGAAATGGTCTGGCT +
Preference number: 2 (lower is better)
Translates to: HGNGIRSENSEVSPRGGGSNFRT*GRNGLA
Trigger: AGCCAGACCATTTCTTCCCCAGGTCCTGAAGTTTGA...TCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR-3UTR CCA 90 bp CATTCAGACACACAATTTTCTAGTTTGGTTCCTGGACCACTTGATTGCCTCCCTTTCAGAGTGAGGCCATaGTCAGCTGCCCTATCCTCC +
Preference number: 2 (lower is better)
Translates to: HSDTQFSSLVPGPLDCLPFRVRP*SAALSS
Trigger: GGAGGATAGGGCAGCTGACCATGGCCTCACTCTGAA...AGGGAGGCAATCAAGTGGTCCAGGAACCAAACTAGAAAATTGTGTGTCTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR-3UTR GCA 90 bp GCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGAAGACAACAGGACAGGAAGTCTTTAGAGTCTaGAGAATGATGCAAACCCAG +
Preference number: 2 (lower is better)
Translates to: ALRIAKFHQGEEEKTTGQEVFRV*RMMQTQ
Trigger: CTGGGTTTGCATCATTCTGCAGACTCTAAAGACTTC...CTGTCCTGTTGTCTTCTCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR-3UTR TCA 90 bp CACTCACAGCCAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATAGATGGGAATGGATGTaGGCTAAGGATTTAATCACT +
Preference number: 2 (lower is better)
Translates to: HSQPNTWDLHGNGIRSENRWEWM*AKDLIT
Trigger: AGTGATTAAATCCTTAGCTCACATCCATTCCCATCT...ATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTGGCTGTGAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR-3UTR TCA 90 bp TTGTTAATAAACACGCTCAATGCCTCCAATCCTGTCCCTGAGGATAATCATGAACAATGCCTTGGCTGGTaGCAAAGAAAGGACCCTTGC +
Preference number: 2 (lower is better)
Translates to: LLINTLNASNPVPEDNHEQCLGW*QRKDPC
Trigger: GCAAGGGTCCTTTCTTTGTCACCAGCCAAGGCATTG...TTCATGATTATCCTCAGGGACAGGATTGGAGGCATTGAGCGTGTTTATTAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR-3UTR CCA 90 bp CATTCAGACACACAATTTTCTAGTTTGGTTCCTGGACCACTTGATTGCCTCCCTAATCATGAAAGTCCTTaGGGTTGTAGAGGAAACCTT +
Preference number: 2 (lower is better)
Translates to: HSDTQFSSLVPGPLDCLPNHESP*GCRGNL
Trigger: AAGGTTTCCTCTACAACCCCAAGGACTTTCATGATT...AGGGAGGCAATCAAGTGGTCCAGGAACCAAACTAGAAAATTGTGTGTCTGAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR-3UTR CCA 90 bp TTGTTAATAAACACGCTCAATGCCTCCAATCCTGTCCCTGAGGATAATCATGAAACCTTAAGAGGAAAATaGCTACTTGGTTATCAATGC +
Preference number: 2 (lower is better)
Translates to: LLINTLNASNPVPEDNHETLRGK*LLGYQC
Trigger: GCATTGATAACCAAGTAGCCATTTTCCTCTTAAGGT...TTCATGATTATCCTCAGGGACAGGATTGGAGGCATTGAGCGTGTTTATTAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR GCA 72 bp CCTGGCTCCCCTGGCACTGTTTCTAGAATAATGCCCTaGAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCC +
Preference number: 3 (lower is better)
Translates to: PGSPGTVSRIMP*RLLSFSDVPRP
Trigger: GGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAGGGCATTATTCTAGAAACAGTGCCAGGGGAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527410.3
3UTR CCA 72 bp CACACTGCTCTCGGCACCACTCCTAAAGGCATCCATTaGCAACGGCTGCCCACTAGGGGCACTGCCACTTGC +
Preference number: 3 (lower is better)
Translates to: HTALGTTPKGIH*QRLPTRGTATC
Trigger: GCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAATGGATGCCTTTAGGAGTGGTGCCGAGAGCAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR GCA 72 bp TCGGCACCACTCCTAAAGGCATCCATTGGCAACGGCTaGCCACTAGGGGCACTGCCACTTGCCTGGCTCAAA +
Preference number: 3 (lower is better)
Translates to: SAPLLKASIGNG*PLGALPLAWLK
Trigger: TTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAATGGATGCCTTTAGGAGTGGTGCCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR CCA 72 bp GGCAACGGCTGCCCACTAGGGGCACTGCCACTTGCCTaGCTCAAACTTCAGGACCTGGGGAAGAAATGGTCT +
Preference number: 3 (lower is better)
Translates to: GNGCPLGALPLA*LKLQDLGKKWS
Trigger: AGACCATTTCTTCCCCAGGTCCTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR GCA 72 bp CATTGGCAACGGCTGCCCACTAGGGGCACTGCCACTTaGCTGGCTCAAACTTCAGGACCTGGGGAAGAAATG +
Preference number: 3 (lower is better)
Translates to: HWQRLPTRGTAT*LAQTSGPGEEM
Trigger: CATTTCTTCCCCAGGTCCTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR TCA 72 bp TCTGGCAGAAAAGGGAAGTCTTTAGAGTCTGCAGAATaGTGCAAACCCAGGCCAGAGTGGACCACACTGCTC +
Preference number: 3 (lower is better)
Translates to: SGRKGKSLESAE*CKPRPEWTTLL
Trigger: GAGCAGTGTGGTCCACTCTGGCCTGGGTTTGCATCATTCTGCAGACTCTAAAGACTTCCCTTTTCTGCCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR-3UTR CAA 90 bp GCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGAAGACAACAGGACAGACTGTCAAGCAGATCTaGAGGGTTATGGTTAAGCCT +
Preference number: 3 (lower is better)
Translates to: ALRIAKFHQGEEEKTTGQTVKQI*RVMVKP
Trigger: AGGCTTAACCATAACCCTCAAGATCTGCTTGACAGT...CTGTCCTGTTGTCTTCTCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR GCA 72 bp GTTCTAATCAGTATTCAGAGTGAGGCCATGGTCAGCTaGCCTATCCTCCCAGTGAGCCCATTCTTGTTCATT +
Preference number: 3 (lower is better)
Translates to: VLISIQSEAMVS*PILPVSPFLFI
Trigger: AATGAACAAGAATGGGCTCACTGGGAGGATAGGGCAGCTGACCATGGCCTCACTCTGAATACTGATTAGAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR TCA 72 bp CTTGGGCCTAAGGAGCCCGAAAGATGGGAATGGATGTaGGCTAAGGATTTAATCACTGTCAAGCAGATCTTG +
Preference number: 3 (lower is better)
Translates to: LGPKEPERWEWM*AKDLITVKQIL
Trigger: CAAGATCTGCTTGACAGTGATTAAATCCTTAGCTCACATCCATTCCCATCTTTCGGGCTCCTTAGGCCCAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR CCA 72 bp AGAAGGGGAACAAGCCTAACTATTCAGCTCCTCTTCTaGGTGGCTGTATCTCCTCATTACCTAGTAAACTGC +
Preference number: 3 (lower is better)
Translates to: RRGTSLTIQLLF*VAVSPHYLVNC
Trigger: GCAGTTTACTAGGTAATGAGGAGATACAGCCACCCAGAAGAGGAGCTGAATAGTTAGGCTTGTTCCCCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR-3UTR CAA 90 bp TTGTTAATAAACACGCTCAATGCCTCCAATCCTGTCCCTGAGGATAATCATGAAACAAAGAAAGGACCCTaGCAGGGACCAGTCACATGC +
Preference number: 3 (lower is better)
Translates to: LLINTLNASNPVPEDNHETKKGP*QGPVTC
Trigger: GCATGTGACTGGTCCCTGCAAGGGTCCTTTCTTTGT...TTCATGATTATCCTCAGGGACAGGATTGGAGGCATTGAGCGTGTTTATTAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR TCA 72 bp GACCATAAAAATGGACACAGGGTGCTGAGAAGCAGCTaGACCAGACGAAATGATGATTCTTATTTTGGGAGG +
Preference number: 3 (lower is better)
Translates to: DHKNGHRVLRSS*TRRNDDSYFGR
Trigger: CCTCCCAAAATAAGAATCATCATTTCGTCTGGTTCAGCTGCTTCTCAGCACCCTGTGTCCATTTTTATGGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR CCA 72 bp TCCAATCCTGTCCCTGAGGATAATCATGAAAGTCCTTaGGGTTGTAGAGGAAACCTTAAGAGGAAAATGGCT +
Preference number: 3 (lower is better)
Translates to: SNPVPEDNHESP*GCRGNLKRKMA
Trigger: AGCCATTTTCCTCTTAAGGTTTCCTCTACAACCCCAAGGACTTTCATGATTATCCTCAGGGACAGGATTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR CCA 72 bp GGTTGTAGAGGAAACCTTAAGAGGAAAATGGCTACTTaGTTATCAATGCCTTGGCTGGTGACAAAGAAAGGA +
Preference number: 3 (lower is better)
Translates to: GCRGNLKRKMAT*LSMPWLVTKKG
Trigger: TCCTTTCTTTGTCACCAGCCAAGGCATTGATAACCAAGTAGCCATTTTCCTCTTAAGGTTTCCTCTACAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp GCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGTCCCAGGAGGCGGCATaGCCTTCACCCGTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: AALVQRRSQARSLLWLPQSQEAA*PSPVCR
Trigger: CCGACAGACGGGTGAAGGCCATGCCGCCTCCTGGGA...CTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp CTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTCCTCCCCAGAGCCATaGAGGTGCTGCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LSFSDVPRPDPSCGCRSSSSPEP*RCCCRC
Trigger: GCACCTGCAGCAGCACCTGCATGGCTCTGGGGAGGA...ACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp GTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTGCTGAGGTCAGCCTGGCTTTaGAAGGCCTGCAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: VQRRSQARSLLWLPQQLLRSAWL*KACSPH
Trigger: GTGGGGGCTGCAGGCCTTGCAAAGCCAGGCTGACCT...CAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp GCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGGAAAGCGCATGTGGTTaGGGAGGGAGGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: AALVQRRSQARSLLWLPQESACG*GGRKAA
Trigger: CGCTGCCTTCCTCCCTCCGCAACCACATGCGCTTTC...CTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR TCA 90 bp CTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTGGCCGGTCCTCACTGTaGCGAAAGCGCATGTGGTTG +
Preference number: 4 (lower is better)
Translates to: LSFSDVPRPDPSCGCRSSGRSSL*RKRMWL
Trigger: CAACCACATGCGCTTTCGTCACAGTGAGGACCGGCC...ACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR TCA 90 bp GCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGGCCCTGAGGGCCACTTaGACTGGTGCTTCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: ALVQRRSQARSLLWLPQQALRAT*TGASCE
Trigger: TTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGGC...CTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CCA 90 bp AGAATAATGCCCTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCGGGCCAAGGTCAGCCTaGCTTTGCAAGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: RIMPCRLLSFSDVPRPDPGPRSA*LCKACS
Trigger: GCTGCAGGCCTTGCAAAGCCAGGCTGACCTTGGCCC...GGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAGGGCATTATTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CCA 90 bp GCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCATGACGTTCCGGCTCTaGAAGTCCAGGATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: AGCSRSATFPGPIPLVVAMTFRL*KSRMQG
Trigger: CCCCTGCATCCTGGACTTCCAGAGCCGGAACGTCAT...GGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CCA 90 bp GCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCTACCACTTTCTCCTaGGTATGGCTGCGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: AGCSRSATFPGPIPLVVAATTFS*VWLRRC
Trigger: GCACCTCCGCAGCCATACCCAGGAGAAAGTGGTAGC...GGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CCA 90 bp GACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTGCTGTGTCAGCGCCCGATCCCTCTTGTaGTTGCCGCAGCAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: DVPRPDPSCGCRSSCCVSARSLL*LPQQLL
Trigger: CAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGC...GCTGACACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR TCA 90 bp TGCAAACCCAGGCCAGAGTGGACCACACTGCTCTCGGCACCACTCCTAAAGGCATTCCATGATGCCCCCTaGAGGTGGCTCAGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: CKPRPEWTTLLSAPLLKAFHDAP*RWLRGW
Trigger: CCAGCCCCTGAGCCACCTTCAGGGGGCATCATGGAA...TGCCTTTAGGAGTGGTGCCGAGAGCAGTGTGGTCCACTCTGGCCTGGGTTTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp CCTTGCAGGGACCAGTCACATGCCATCCTTGGGCCTAAGGAGCCCGAAAGATGGTCCTCCCCAGAGCCATaGAGGTGCTGCTGCAGGTGC +
Preference number: 4 (lower is better)
Translates to: PCRDQSHAILGPKEPERWSSPEP*RCCCRC
Trigger: GCACCTGCAGCAGCACCTGCATGGCTCTGGGGAGGA...CCATCTTTCGGGCTCCTTAGGCCCAAGGATGGCATGTGACTGGTCCCTGCAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp CAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGTGCTTCTTGCGAAGGTaGACGGTGAGGTTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: QAALVQRRSQARSLLWLPCFLRR*TVRLLP
Trigger: GGGCAACAACCTCACCGTGCACCTTCGCAAGAAGCA...CGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp GACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTGCTGTGTCAGCAGGCGAAAACGGGGATaGCCTGAGGGCCACTTGAAC +
Preference number: 4 (lower is better)
Translates to: DVPRPDPSCGCRSSCCVSRRKRG*PEGHLN
Trigger: GTTCAAGTGGCCCTCAGGGCATCCCCGTTTTCGCCT...GCTGACACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CCA 90 bp GCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGACTTTCTCCTGGGTATaGCTGCGGAGGTGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: AALVQRRSQARSLLWLPQTFSWV*LRRCSR
Trigger: TCGAGAGCACCTCCGCAGCCATACCCAGGAGAAAGT...CTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CCA 90 bp CTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGACATGCCCCCACAGGTaGGGCAGGCTACCACTTTCT +
Preference number: 4 (lower is better)
Translates to: LQAALVQRRSQARSLLWLTCPHR*GRLPLS
Trigger: AGAAAGTGGTAGCCTGCCCCACCTGTGGGGGCATGT...CAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CCA 90 bp GCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGACATGGTTGCGCATGTaGTCCCGCAATAGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: ALVQRRSQARSLLWLPQQTWLRM*SRNSRS
Trigger: AGAGCGGCTATTGCGGGACCACATGCGCAACCATGT...CTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CCA 90 bp TTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTGCTGTGCTGGCTCCTCGCTGTaGGTATCCAGGTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: FSDVPRPDPSCGCRSSCCAGSSL*VSRCFW
Trigger: CCAGAAGCACCTGGATACCCACAGCGAGGAGCCAGC...ACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CCA 90 bp CAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGGAGGGCCACTTGAACTaGTGCTTCTTGCGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: QAALVQRRSQARSLLWLPEGHLN*CFLRRC
Trigger: GCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTC...CGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR TCA 90 bp GCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGTGCTGCTGCAGGTGCTaGGTGACATGCTCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: AALVQRRSQARSLLWLPQCCCRC*VTCSKN
Trigger: GTTCTTTGAGCATGTCACTCAGCACCTGCAGCAGCA...CTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR TCA 90 bp AGAATAATGCCCTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCGTGCTGCTGATCCAATaGGGTCTGGCGACGGATGTG +
Preference number: 4 (lower is better)
Translates to: RIMPCRLLSFSDVPRPDPVLLIQ*GLATDV
Trigger: CACATCCGTCGCCAGACCTCATTGGATCAGCAGCAC...GGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAGGGCATTATTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR TCA 90 bp ATTGGCAACGGCTGCCCACTAGGGGCACTGCCACTTGCCTGGCTCAAACTTCAGGGCCGGTCCTCACTGTaGCGAAAGCGCATGTGGTTG +
Preference number: 4 (lower is better)
Translates to: IGNGCPLGALPLAWLKLQGRSSL*RKRMWL
Trigger: CAACCACATGCGCTTTCGTCACAGTGAGGACCGGCC...CTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp TGCAAACCCAGGCCAGAGTGGACCACACTGCTCTCGGCACCACTCCTAAAGGCACATCTCTTGACCTTGTaGTCCGCCCGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: CKPRPEWTTLLSAPLLKAHLLTL*SARLSL
Trigger: GAGGCTGAGGCGGGCGGATCACAAGGTCAAGAGATG...TGCCTTTAGGAGTGGTGCCGAGAGCAGTGTGGTCCACTCTGGCCTGGGTTTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp CTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCACCGGGTTGTCCTTaGCGACTGCTTCGTATTCAC +
Preference number: 4 (lower is better)
Translates to: LQAALVQRRSQARSLLWLPPGCP*RLLRIH
Trigger: GTGAATACGAAGCAGTCGGCAAGGACAACCCGGTGG...CAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp CTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGGGCCACTTGAACTGGTaGTTCTTGCGAAGGTGCACG +
Preference number: 4 (lower is better)
Translates to: LQAALVQRRSQARSLLWLGHLNW*FLRRCT
Trigger: CGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCC...CAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp CCTTGCAGGGACCAGTCACATGCCATCCTTGGGCCTAAGGAGCCCGAAAGATGGTCCATTGGCAACGGCTaGCCACTAGGGGCACTGCCA +
Preference number: 4 (lower is better)
Translates to: PCRDQSHAILGPKEPERWSIGNG*PLGALP
Trigger: TGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAATGGA...CCATCTTTCGGGCTCCTTAGGCCCAAGGATGGCATGTGACTGGTCCCTGCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp CCTTGCAGGGACCAGTCACATGCCATCCTTGGGCCTAAGGAGCCCGAAAGATGGGCTGGCTCCTCGCTGTaGGTATCCAGGTGCTTCTGG +
Preference number: 4 (lower is better)
Translates to: PCRDQSHAILGPKEPERWAGSSL*VSRCFW
Trigger: CCAGAAGCACCTGGATACCCACAGCGAGGAGCCAGC...CCATCTTTCGGGCTCCTTAGGCCCAAGGATGGCATGTGACTGGTCCCTGCAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp CCTTGCAGGGACCAGTCACATGCCATCCTTGGGCCTAAGGAGCCCGAAAGATGGTGGGGGAGGCTCCCCTaGGGCTTCAGACAGCACATA +
Preference number: 4 (lower is better)
Translates to: PCRDQSHAILGPKEPERWWGRLP*GFRQHI
Trigger: TATGTGCTGTCTGAAGCCCCAGGGGAGCCTCCCCCA...CCATCTTTCGGGCTCCTTAGGCCCAAGGATGGCATGTGACTGGTCCCTGCAAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp AGAATAATGCCCTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCCAGGGATATCAGGGATaGCGTTCCGGCTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: RIMPCRLLSFSDVPRPDPQGYQG*RSGSGS
Trigger: ACTTCCAGAGCCGGAACGTCATCCCTGATATCCCTG...GGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAGGGCATTATTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR TCA 90 bp CTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTGTTTACTGCGGTCCTTaGAGGTGCAGGTACAGCCTT +
Preference number: 4 (lower is better)
Translates to: LSFSDVPRPDPSCGCRSSVYCGP*RCRYSL
Trigger: AAGGCTGTACCTGCACCTTCAAGGACCGCAGTAAAC...ACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR TCA 90 bp GCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGAGAGGGATCGGGCACTaGAGGTGCAGTTCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: ALVQRRSQARSLLWLPQQRGIGH*RCSSQN
Trigger: ATTTTGAGAACTGCACCTTCAGTGCCCGATCCCTCT...CTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR TCA 90 bp GCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGGGTTGTTGCCCCGTGTaGAGCATTTGTCACACACAT +
Preference number: 4 (lower is better)
Translates to: ALVQRRSQARSLLWLPQQGCCPV*SICHTH
Trigger: ATGTGTGTGACAAATGCTTCACACGGGGCAACAACC...CTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp GCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGTTGTCCTTGCCGACTaGTTCGTATTCACAGCACAG +
Preference number: 4 (lower is better)
Translates to: AGCSRSATFPGPIPLVVAVVLAD*FVFTAQ
Trigger: CTGTGCTGTGAATACGAAGCAGTCGGCAAGGACAAC...GGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp AGAATAATGCCCTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTCCTGGGTATGGCTaGGGAGGTGCTCTCGAAGTT +
Preference number: 4 (lower is better)
Translates to: RIMPCRLLSFSDVPRPDPSPGYG*GGALEV
Trigger: AACTTCGAGAGCACCTCCGCAGCCATACCCAGGAGA...GGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAGGGCATTATTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp AATAATGCCCTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTATTGTTGGCAAACATaGCCCCACAGGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: NNALQAALVQRRSQARSLYCWQT*PHRWGR
Trigger: CCTGCCCCACCTGTGGGGGCATGTTTGCCAACAATA...GAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAGGGCATTATT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp TTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTGCTGTGATCCCTCTTGTGGTTaGCGCAGCAGTTGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: FSDVPRPDPSCGCRSSCCDPSCG*RSSCCV
Trigger: GACACAGCAACTGCTGCGGCAACCACAAGAGGGATC...ACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp GCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGTCTAGAATAATGCCCTaGAGGCTGCTCTCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: AALVQRRSQARSLLWLPQSRIMP*RLLSFS
Trigger: GCTGAACGAGAGCAGCCTGCAGGGCATTATTCTAGA...CTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CCA 90 bp ATTGGCAACGGCTGCCCACTAGGGGCACTGCCACTTGCCTGGCTCAAACTTCAGACATGCCCCCACAGGTaGGGCAGGCTACCACTTTCT +
Preference number: 4 (lower is better)
Translates to: IGNGCPLGALPLAWLKLQTCPHR*GRLPLS
Trigger: AGAAAGTGGTAGCCTGCCCCACCTGTGGGGGCATGT...CTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp CCTTGCAGGGACCAGTCACATGCCATCCTTGGGCCTAAGGAGCCCGAAAGATGGCAGGGATATCAGGGATaGCGTTCCGGCTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: PCRDQSHAILGPKEPERWQGYQG*RSGSGS
Trigger: ACTTCCAGAGCCGGAACGTCATCCCTGATATCCCTG...CCATCTTTCGGGCTCCTTAGGCCCAAGGATGGCATGTGACTGGTCCCTGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp GCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGTCTGGCGACGGATGTaGTCTAAGAACTTGGTATTG +
Preference number: 4 (lower is better)
Translates to: AGCSRSATFPGPIPLVVAVWRRM*SKNLVL
Trigger: CAATACCAAGTTCTTAGATCACATCCGTCGCCAGAC...GGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR TCA 90 bp TGCAAACCCAGGCCAGAGTGGACCACACTGCTCTCGGCACCACTCCTAAAGGCAATGGACACAGGGTGCTaGGAAGCAGCTGAACCAGAC +
Preference number: 4 (lower is better)
Translates to: CKPRPEWTTLLSAPLLKAMDTGC*EAAEPD
Trigger: GTCTGGTTCAGCTGCTTCTCAGCACCCTGTGTCCAT...TGCCTTTAGGAGTGGTGCCGAGAGCAGTGTGGTCCACTCTGGCCTGGGTTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp GTTTCTAGAATAATGCCCTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCTCTGGAAGTCCAGGATaGAGGGGCCAAGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: VSRIMPCRLLSFSDVPRPSGSPG*RGQGQP
Trigger: AGGCTGACCTTGGCCCCTGCATCCTGGACTTCCAGA...GGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAGGGCATTATTCTAGAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp TGCAAACCCAGGCCAGAGTGGACCACACTGCTCTCGGCACCACTCCTAAAGGCACCACCGGGTTGTCCTTaGCGACTGCTTCGTATTCAC +
Preference number: 4 (lower is better)
Translates to: CKPRPEWTTLLSAPLLKAPPGCP*RLLRIH
Trigger: GTGAATACGAAGCAGTCGGCAAGGACAACCCGGTGG...TGCCTTTAGGAGTGGTGCCGAGAGCAGTGTGGTCCACTCTGGCCTGGGTTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp ATTGGCAACGGCTGCCCACTAGGGGCACTGCCACTTGCCTGGCTCAAACTTCAGGGCCACTTGAACTGGTaGTTCTTGCGAAGGTGCACG +
Preference number: 4 (lower is better)
Translates to: IGNGCPLGALPLAWLKLQGHLNW*FLRRCT
Trigger: CGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCC...CTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp CCTTGCAGGGACCAGTCACATGCCATCCTTGGGCCTAAGGAGCCCGAAAGATGGGATCCCTCTTGTGGTTaGCGCAGCAGTTGCTGTGTC +
Preference number: 4 (lower is better)
Translates to: PCRDQSHAILGPKEPERWDPSCG*RSSCCV
Trigger: GACACAGCAACTGCTGCGGCAACCACAAGAGGGATC...CCATCTTTCGGGCTCCTTAGGCCCAAGGATGGCATGTGACTGGTCCCTGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp CACTCACAGCCAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATTCCCAGGAGGCGGCATaGCCTTCACCCGTCTGTCGG +
Preference number: 4 (lower is better)
Translates to: HSQPNTWDLHGNGIRSENSQEAA*PSPVCR
Trigger: CCGACAGACGGGTGAAGGCCATGCCGCCTCCTGGGA...ATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTGGCTGTGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp CCTTGCAGGGACCAGTCACATGCCATCCTTGGGCCTAAGGAGCCCGAAAGATGGACATGGTTGCGCATGTaGTCCCGCAATAGCCGCTCT +
Preference number: 4 (lower is better)
Translates to: PCRDQSHAILGPKEPERWTWLRM*SRNSRS
Trigger: AGAGCGGCTATTGCGGGACCACATGCGCAACCATGT...CCATCTTTCGGGCTCCTTAGGCCCAAGGATGGCATGTGACTGGTCCCTGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp CCTTGCAGGGACCAGTCACATGCCATCCTTGGGCCTAAGGAGCCCGAAAGATGGGCTGGCCTTGGGCATTaGTCTGATTCACCACGTGGA +
Preference number: 4 (lower is better)
Translates to: PCRDQSHAILGPKEPERWAGLGH*SDSPRG
Trigger: TCCACGTGGTGAATCAGACCAATGCCCAAGGCCAGC...CCATCTTTCGGGCTCCTTAGGCCCAAGGATGGCATGTGACTGGTCCCTGCAAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp TGCAAACCCAGGCCAGAGTGGACCACACTGCTCTCGGCACCACTCCTAAAGGCATTCAGAGTGAGGCCATaGTCAGCTGCCCTATCCTCC +
Preference number: 4 (lower is better)
Translates to: CKPRPEWTTLLSAPLLKAFRVRP*SAALSS
Trigger: GGAGGATAGGGCAGCTGACCATGGCCTCACTCTGAA...TGCCTTTAGGAGTGGTGCCGAGAGCAGTGTGGTCCACTCTGGCCTGGGTTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp GTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTGCTGGAACTTTTCCATGGTTaGGCACACAAAGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: VQRRSQARSLLWLPQQLLELFHG*AHKGAG
Trigger: TCCTGCTCCTTTGTGTGCTCAACCATGGAAAAGTTC...CAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR TCA 90 bp CCTTGCAGGGACCAGTCACATGCCATCCTTGGGCCTAAGGAGCCCGAAAGATGGAGTAGACATGGCGGATaGGGTCAGCAGAACTGTCCA +
Preference number: 4 (lower is better)
Translates to: PCRDQSHAILGPKEPERWSRHGG*GQQNCP
Trigger: TGGACAGTTCTGCTGACCTCATCCGCCATGTCTACT...CCATCTTTCGGGCTCCTTAGGCCCAAGGATGGCATGTGACTGGTCCCTGCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp GCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTGCTGTGTCAAAGGAATTCTCACAGTaGTCCCACAGACACAGGAAG +
Preference number: 4 (lower is better)
Translates to: ATFPGPIPLVVAAAVAVSKEFSQ*SHRHRK
Trigger: CTTCCTGTGTCTGTGGGAGCACTGTGAGAATTCCTT...TGACACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp GCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGACAGCACAGACTGTGTaGTTCCACATGCCGATAAAA +
Preference number: 4 (lower is better)
Translates to: ALVQRRSQARSLLWLPQQTAQTV*FHMPIK
Trigger: TTTTATCGGCATGTGGAAGCACACAGTCTGTGCTGT...CTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp TCTAGAATAATGCCCTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATGTATGGCTGCGGAGGTaGTCTCGAAGTTTACTGCGG +
Preference number: 4 (lower is better)
Translates to: SRIMPCRLLSFSDVPRPDVWLRR*SRSLLR
Trigger: CCGCAGTAAACTTCGAGAGCACCTCCGCAGCCATAC...ATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAGGGCATTATTCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp GTTTCTAGAATAATGCCCTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGGTTGCCGCAGCAGTTaGTGTGTCAGCTCTACACTC +
Preference number: 4 (lower is better)
Translates to: VSRIMPCRLLSFSDVPRPGCRSS*CVSSTL
Trigger: GAGTGTAGAGCTGACACAGCAACTGCTGCGGCAACC...GGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAGGGCATTATTCTAGAAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CCA 90 bp AATAATGCCCTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCCACAGACACAGGAAGTaGTCAGGGATATCAGGGATG +
Preference number: 4 (lower is better)
Translates to: NNALQAALVQRRSQARSLHRHRK*SGISGM
Trigger: CATCCCTGATATCCCTGACCACTTCCTGTGTCTGTG...GAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAGGGCATTATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR TCA 90 bp ATTGGCAACGGCTGCCCACTAGGGGCACTGCCACTTGCCTGGCTCAAACTTCAGAGAGGGATCGGGCACTaGAGGTGCAGTTCTCAAAAT +
Preference number: 4 (lower is better)
Translates to: IGNGCPLGALPLAWLKLQRGIGH*RCSSQN
Trigger: ATTTTGAGAACTGCACCTTCAGTGCCCGATCCCTCT...CTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp CACTCACAGCCAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATGTTGTCCTGAGAGGCTaGGAGGGCTGTCCCTTCGCT +
Preference number: 4 (lower is better)
Translates to: HSQPNTWDLHGNGIRSENVVLRG*EGCPFA
Trigger: AGCGAAGGGACAGCCCTCTCAGCCTCTCAGGACAAC...ATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTGGCTGTGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp TGCAAACCCAGGCCAGAGTGGACCACACTGCTCTCGGCACCACTCCTAAAGGCATTAGAGTCTGCAGAATaGTGCAAACCCAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: CKPRPEWTTLLSAPLLKALESAE*CKPRPE
Trigger: CTCTGGCCTGGGTTTGCATCATTCTGCAGACTCTAA...TGCCTTTAGGAGTGGTGCCGAGAGCAGTGTGGTCCACTCTGGCCTGGGTTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp GTTTCTAGAATAATGCCCTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGTTCCTTGTACCTGGTaGGGTAGGAGCATAAAGGGC +
Preference number: 4 (lower is better)
Translates to: VSRIMPCRLLSFSDVPRPVPCTW*GRSIKG
Trigger: GCCCTTTATGCTCCTACCTCACCAGGTACAAGGAAC...GGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAGGGCATTATTCTAGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp ATTGGCAACGGCTGCCCACTAGGGGCACTGCCACTTGCCTGGCTCAAACTTCAGTCTAGAATAATGCCCTaGAGGCTGCTCTCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: IGNGCPLGALPLAWLKLQSRIMP*RLLSFS
Trigger: GCTGAACGAGAGCAGCCTGCAGGGCATTATTCTAGA...CTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp GCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGAAGACAACAGGACAGGCCCGATCCCTCTTGTaGTTGCCGCAGCAGTTGCTG +
Preference number: 4 (lower is better)
Translates to: ALRIAKFHQGEEEKTTGQARSLL*LPQQLL
Trigger: CAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGC...CTGTCCTGTTGTCTTCTCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
3UTR CAA 72 bp GAAAGGACCCTTGCAGGGACCAGTCACATGCCATCCTaGGGCCTAAGGAGCCCGAAAGATGGGAATGGATGT +
Preference number: 4 (lower is better)
Translates to: ERTLAGTSHMPS*GLRSPKDGNGC
Trigger: ACATCCATTCCCATCTTTCGGGCTCCTTAGGCCCAAGGATGGCATGTGACTGGTCCCTGCAAGGGTCCTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp GTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTGCTGCATTTGTCACACACATaGCATTTGTACCTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: VQRRSQARSLLWLPQQLLHLSHT*HLYLGS
Trigger: TGAGCCAAGGTACAAATGTCATGTGTGTGACAAATG...CAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR TCA 90 bp ATTGGCAACGGCTGCCCACTAGGGGCACTGCCACTTGCCTGGCTCAAACTTCAGTCCTCAGCTATTCCTTaGAGCTTTTCCATGATGCCC +
Preference number: 4 (lower is better)
Translates to: IGNGCPLGALPLAWLKLQSSAIP*SFSMMP
Trigger: GGGCATCATGGAAAAGCTTCAAGGAATAGCTGAGGA...CTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp CCTTGCAGGGACCAGTCACATGCCATCCTTGGGCCTAAGGAGCCCGAAAGATGGCTGTCAAGCAGATCTTaGGGGTTATGGTTAAGCCTG +
Preference number: 4 (lower is better)
Translates to: PCRDQSHAILGPKEPERWLSSRS*GLWLSL
Trigger: CAGGCTTAACCATAACCCTCAAGATCTGCTTGACAG...CCATCTTTCGGGCTCCTTAGGCCCAAGGATGGCATGTGACTGGTCCCTGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp TTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTGCTGTCAAAAGCCACATTCCTaGCACAAGCAGGAGAATTCT +
Preference number: 4 (lower is better)
Translates to: FSDVPRPDPSCGCRSSCCQKPHS*HKQENS
Trigger: AGAATTCTCCTGCTTGTGGCAGGAATGTGGCTTTTG...ACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp ATTGGCAACGGCTGCCCACTAGGGGCACTGCCACTTGCCTGGCTCAAACTTCAGAAGGAATTCTCACAGTaGTCCCACAGACACAGGAAG +
Preference number: 4 (lower is better)
Translates to: IGNGCPLGALPLAWLKLQKEFSQ*SHRHRK
Trigger: CTTCCTGTGTCTGTGGGAGCACTGTGAGAATTCCTT...CTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp CATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGAAAGCGCATGTGGTTaGGGAGGGAGGAAGGCAGCG +
Preference number: 4 (lower is better)
Translates to: HGNGIRSENSEVSPRGGGESACG*GGRKAA
Trigger: CGCTGCCTTCCTCCCTCCGCAACCACATGCGCTTTC...TCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp GACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTGCTGTGTCAGCCAAAGAACTTTTCCATaGTTGAGCACACAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: DVPRPDPSCGCRSSCCVSQRTFP*LSTQRS
Trigger: GCTCCTTTGTGTGCTCAACCATGGAAAAGTTCTTTG...GCTGACACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CCA 90 bp TCTAGAATAATGCCCTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCACTGTTTCAGCTTaGTGTGGTAGCAGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: SRIMPCRLLSFSDVPRPDPTVSA*CGSSGS
Trigger: ACTTCCACTGCTACCACACCAAGCTGAAACAGTGGG...ATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAGGGCATTATTCTAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CCA 90 bp CTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGGTATCCAGGTGCTTCTaGAGGTCAATAAGATTCTTG +
Preference number: 4 (lower is better)
Translates to: LQAALVQRRSQARSLLWLVSRCF*RSIRFL
Trigger: CAAGAATCTTATTGACCTCCAGAAGCACCTGGATAC...CAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CCA 90 bp GTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTGCTGATGACATTTGTACCTTaGCTCAGAGTCTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: VQRRSQARSLLWLPQQLLMTFVP*LRVSFM
Trigger: CATGAAGGAGACTCTGAGCCAAGGTACAAATGTCAT...CAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CCA 90 bp TGCAAACCCAGGCCAGAGTGGACCACACTGCTCTCGGCACCACTCCTAAAGGCATCAAACTTCAGGACCTaGGGAAGAAATGGTCTGGCT +
Preference number: 4 (lower is better)
Translates to: CKPRPEWTTLLSAPLLKASNFRT*GRNGLA
Trigger: AGCCAGACCATTTCTTCCCCAGGTCCTGAAGTTTGA...TGCCTTTAGGAGTGGTGCCGAGAGCAGTGTGGTCCACTCTGGCCTGGGTTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp CATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGTGCTGCTGATCCAATaGGGTCTGGCGACGGATGTG +
Preference number: 4 (lower is better)
Translates to: HGNGIRSENSEVSPRGGGVLLIQ*GLATDV
Trigger: CACATCCGTCGCCAGACCTCATTGGATCAGCAGCAC...TCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp TCTAGAATAATGCCCTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATAATCTCTTGGAACAGTaGGAACACTGGAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SRIMPCRLLSFSDVPRPDNLLEQ*EHWKCC
Trigger: GCAGCACTTCCAGTGTTCTCACTGTTCCAAGAGATT...ATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAGGGCATTATTCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp TTTAACAAGAACACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGAGGTCAGCCTGGCTTTaGAAGGCCTGCAGCCCCCAC +
Preference number: 4 (lower is better)
Translates to: FNKNTHIQDPLKESRVLRRSAWL*KACSPH
Trigger: GTGGGGGCTGCAGGCCTTGCAAAGCCAGGCTGACCT...CCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGTGTTCTTGTTAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp ATTGGCAACGGCTGCCCACTAGGGGCACTGCCACTTGCCTGGCTCAAACTTCAGACAGCACAGACTGTGTaGTTCCACATGCCGATAAAA +
Preference number: 4 (lower is better)
Translates to: IGNGCPLGALPLAWLKLQTAQTV*FHMPIK
Trigger: TTTTATCGGCATGTGGAAGCACACAGTCTGTGCTGT...CTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp GTTTCTAGAATAATGCCCTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCAGTGATTCACATGGTTaGGCATGTGGTCCCGCAATA +
Preference number: 4 (lower is better)
Translates to: VSRIMPCRLLSFSDVPRPSDSHG*ACGPAI
Trigger: TATTGCGGGACCACATGCGCAACCATGTGAATCACT...GGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAGGGCATTATTCTAGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR GCA 90 bp TCTAGAATAATGCCCTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCTGTGGGTATCCAGGTaGTTCTGGAGGTCAATAAGA +
Preference number: 4 (lower is better)
Translates to: SRIMPCRLLSFSDVPRPDLWVSR*FWRSIR
Trigger: TCTTATTGACCTCCAGAAGCACCTGGATACCCACAG...ATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAGGGCATTATTCTAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CCA 90 bp CATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGCTACCACTTTCTCCTaGGTATGGCTGCGGAGGTGC +
Preference number: 4 (lower is better)
Translates to: HGNGIRSENSEVSPRGGGATTFS*VWLRRC
Trigger: GCACCTCCGCAGCCATACCCAGGAGAAAGTGGTAGC...TCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp GTTTCTAGAATAATGCCCTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGCAATAGCCGCTCTGTaGCAAATCTCTTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: VSRIMPCRLLSFSDVPRPAIAAL*QISWNS
Trigger: ACTGTTCCAAGAGATTTGCCACAGAGCGGCTATTGC...GGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAGGGCATTATTCTAGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CCA 90 bp GCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGAAGACAACAGGACAGGCACTGCCACTTGCCTaGCTCAAACTTCAGGACCTG +
Preference number: 4 (lower is better)
Translates to: ALRIAKFHQGEEEKTTGQALPLA*LKLQDL
Trigger: CAGGTCCTGAAGTTTGAGCCAGGCAAGTGGCAGTGC...CTGTCCTGTTGTCTTCTCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp TTTAACAAGAACACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGGAACTGGGGTTGTCCTaGGAGGCTGAGAGGGCTGTC +
Preference number: 4 (lower is better)
Translates to: FNKNTHIQDPLKESRVLRELGLS*EAERAV
Trigger: GACAGCCCTCTCAGCCTCTCAGGACAACCCCAGTTC...CCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGTGTTCTTGTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp GCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGAAGACAACAGGACAGCCTTGGGCATTGGTCTaGTTCACCACGTGGATGACA +
Preference number: 4 (lower is better)
Translates to: ALRIAKFHQGEEEKTTGQPWALV*FTTWMT
Trigger: TGTCATCCACGTGGTGAATCAGACCAATGCCCAAGG...CTGTCCTGTTGTCTTCTCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp CACTCACAGCCAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATAATCAGTATTCAGAGTaGGGCCATGGTCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: HSQPNTWDLHGNGIRSENNQYSE*GHGQLP
Trigger: GGGCAGCTGACCATGGCCTCACTCTGAATACTGATT...ATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTGGCTGTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp GGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGAATACCGAAAACGGGGATaGCCTGAGGGCCACTTGAAC +
Preference number: 4 (lower is better)
Translates to: GNGIRSENSEVSPRGGGEYRKRG*PEGHLN
Trigger: GTTCAAGTGGCCCTCAGGGCATCCCCGTTTTCGGTA...TTCTCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGCGTATGCCATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp CACTCACAGCCAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATCAAAGAAAGGACCCTTaGAGGGACCAGTCACATGCC +
Preference number: 4 (lower is better)
Translates to: HSQPNTWDLHGNGIRSENQRKDP*RDQSHA
Trigger: GGCATGTGACTGGTCCCTGCAAGGGTCCTTTCTTTG...ATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTGGCTGTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp TTTAACAAGAACACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGGTCGCCAGGCTGGAGTaGAGTGGCATGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: FNKNTHIQDPLKESRVLRVARLE*SGMISA
Trigger: AGCCGAGATCATGCCACTGCACTCCAGCCTGGCGAC...CCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGTGTTCTTGTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp CCTTGCAGGGACCAGTCACATGCCATCCTTGGGCCTAAGGAGCCCGAAAGATGGCAAAGAACTTTTCCATaGTTGAGCACACAAAGGAGC +
Preference number: 4 (lower is better)
Translates to: PCRDQSHAILGPKEPERWQRTFP*LSTQRS
Trigger: GCTCCTTTGTGTGCTCAACCATGGAAAAGTTCTTTG...CCATCTTTCGGGCTCCTTAGGCCCAAGGATGGCATGTGACTGGTCCCTGCAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp GTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTGCTGTGTGATCTAAGAACTTaGTATTGTTGGCAAACATGC +
Preference number: 4 (lower is better)
Translates to: VQRRSQARSLLWLPQQLLCDLRT*YCWQTC
Trigger: GCATGTTTGCCAACAATACCAAGTTCTTAGATCACA...CAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CCA 90 bp CACTCACAGCCAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATGGCCTTCAAACCATCTaGATCTCTGGCTCCTCAGCT +
Preference number: 4 (lower is better)
Translates to: HSQPNTWDLHGNGIRSENGLQTI*ISGSSA
Trigger: AGCTGAGGAGCCAGAGATCCAGATGGTTTGAAGGCC...ATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTGGCTGTGAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp GGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGAAGGGGAAGAAATGGTCTaGCTCTGCGGCCTTCAAACC +
Preference number: 4 (lower is better)
Translates to: GNGIRSENSEVSPRGGGEGEEMV*LCGLQT
Trigger: GGTTTGAAGGCCGCAGAGCCAGACCATTTCTTCCCC...TTCTCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGCGTATGCCATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp ACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGCTCCCCACAAAATCACAGCCAAACACCTaGGACCTCCATGGAAATGGC +
Preference number: 4 (lower is better)
Translates to: THIQDPLKESRVLRLPTKSQPNT*DLHGNG
Trigger: GCCATTTCCATGGAGGTCCCAGGTGTTTGGCTGTGA...TTTTGTGGGGAGCCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp CACTCACAGCCAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATGGGGTTTCACCATGTTaGCCAGGATGGTCTCCATCT +
Preference number: 4 (lower is better)
Translates to: HSQPNTWDLHGNGIRSENGVSPC*PGWSPS
Trigger: AGATGGAGACCATCCTGGCCAACATGGTGAAACCCC...ATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTGGCTGTGAGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp CATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGTTTACTGCGGTCCTTaGAGGTGCAGGTACAGCCTT +
Preference number: 4 (lower is better)
Translates to: HGNGIRSENSEVSPRGGGVYCGP*RCRYSL
Trigger: AAGGCTGTACCTGCACCTTCAAGGACCGCAGTAAAC...TCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp CATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGCCCTATCCTCCCAGTaGGCCCATTCTTGTTCATTC +
Preference number: 4 (lower is better)
Translates to: HGNGIRSENSEVSPRGGGALSSQ*AHSCSF
Trigger: GAATGAACAAGAATGGGCTCACTGGGAGGATAGGGC...TCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp TTTAACAAGAACACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGATGGTCTCCATCTCTTaGCCTTGTGATCCGCCCGCC +
Preference number: 4 (lower is better)
Translates to: FNKNTHIQDPLKESRVLRMVSIS*PCDPPA
Trigger: GGCGGGCGGATCACAAGGTCAAGAGATGGAGACCAT...CCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGTGTTCTTGTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp TTTAACAAGAACACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGTCTGGAAGTCCAGGATaGAGGGGCCAAGGTCAGCCT +
Preference number: 4 (lower is better)
Translates to: FNKNTHIQDPLKESRVLRSGSPG*RGQGQP
Trigger: AGGCTGACCTTGGCCCCTGCATCCTGGACTTCCAGA...CCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGTGTTCTTGTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp CAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTTATTGTTGGCAAACATaGCCCCACAGGTGGGGCAGG +
Preference number: 4 (lower is better)
Translates to: QTPGTSMEMAYALRIAKFYCWQT*PHRWGR
Trigger: CCTGCCCCACCTGTGGGGGCATGTTTGCCAACAATA...AAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp GGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGAAGAAATGGTCTGGCTCTaGGGCCTTCAAACCATCTGG +
Preference number: 4 (lower is better)
Translates to: GNGIRSENSEVSPRGGGEEMVWL*GLQTIW
Trigger: CCAGATGGTTTGAAGGCCGCAGAGCCAGACCATTTC...TTCTCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGCGTATGCCATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp CATTCAGACACACAATTTTCTAGTTTGGTTCCTGGACCACTTGATTGCCTCCCTCCTGGACCACTTGATTaGCTCCCTTCCCTGGGAGGC +
Preference number: 4 (lower is better)
Translates to: HSDTQFSSLVPGPLDCLPPGPLD*LPSLGG
Trigger: GCCTCCCAGGGAAGGGAGGCAATCAAGTGGTCCAGG...AGGGAGGCAATCAAGTGGTCCAGGAACCAAACTAGAAAATTGTGTGTCTGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp CAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTACTTTCTCCTGGGTATaGCTGCGGAGGTGCTCTCGA +
Preference number: 4 (lower is better)
Translates to: QTPGTSMEMAYALRIAKFTFSWV*LRRCSR
Trigger: TCGAGAGCACCTCCGCAGCCATACCCAGGAGAAAGT...AAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp GGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGAACCCAGAGATCCTTTTTaGGCAGCTTCCTGTCCCCAA +
Preference number: 4 (lower is better)
Translates to: GNGIRSENSEVSPRGGGEPRDPF*AASCPQ
Trigger: TTGGGGACAGGAAGCTGCCCAAAAAGGATCTCTGGG...TTCTCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGCGTATGCCATTTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp GCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGAAGACAACAGGACAGCCATGTTGGCCAGGATaGTCTCCATCTCTTGACCTT +
Preference number: 4 (lower is better)
Translates to: ALRIAKFHQGEEEKTTGQPCWPG*SPSLDL
Trigger: AAGGTCAAGAGATGGAGACCATCCTGGCCAACATGG...CTGTCCTGTTGTCTTCTCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp CATTCAGACACACAATTTTCTAGTTTGGTTCCTGGACCACTTGATTGCCTCCCTGCCCTGAGGGCCACTTaGACTGGTGCTTCTTGCGAA +
Preference number: 4 (lower is better)
Translates to: HSDTQFSSLVPGPLDCLPALRAT*TGASCE
Trigger: TTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGGC...AGGGAGGCAATCAAGTGGTCCAGGAACCAAACTAGAAAATTGTGTGTCTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp AAGAGGAAAATGGCTACTTGGTTATCAATGCCTTGGCTGGTGACAAAGAAAGGAGGTTCCTGGACCACTTaGTTGCCTCCCTTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: KRKMATWLSMPWLVTKKGGSWTT*LPPFPG
Trigger: CCCAGGGAAGGGAGGCAATCAAGTGGTCCAGGAACC...TCCTTTCTTTGTCACCAGCCAAGGCATTGATAACCAAGTAGCCATTTTCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp CACTCACAGCCAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATCCAAGACTATTTCCTTaGCCTCTCCAGCATAGCAGT +
Preference number: 4 (lower is better)
Translates to: HSQPNTWDLHGNGIRSENPRLFP*PLQHSS
Trigger: ACTGCTATGCTGGAGAGGTCAAGGAAATAGTCTTGG...ATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTGGCTGTGAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp CATTCAGACACACAATTTTCTAGTTTGGTTCCTGGACCACTTGATTGCCTCCCTTGGCTTTGCAAGGCCTaGAGCCCCCACTGTTTCAGC +
Preference number: 4 (lower is better)
Translates to: HSDTQFSSLVPGPLDCLPWLCKA*SPHCFS
Trigger: GCTGAAACAGTGGGGGCTGCAGGCCTTGCAAAGCCA...AGGGAGGCAATCAAGTGGTCCAGGAACCAAACTAGAAAATTGTGTGTCTGAATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp TTTAACAAGAACACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGGTATGGCTGCGGAGGTaGTCTCGAAGTTTACTGCGG +
Preference number: 4 (lower is better)
Translates to: FNKNTHIQDPLKESRVLRVWLRR*SRSLLR
Trigger: CCGCAGTAAACTTCGAGAGCACCTCCGCAGCCATAC...CCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGTGTTCTTGTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp AAGAGGAAAATGGCTACTTGGTTATCAATGCCTTGGCTGGTGACAAAGAAAGGAGAGGCCATGGTCAGCTaGCCTATCCTCCCAGTGAGC +
Preference number: 4 (lower is better)
Translates to: KRKMATWLSMPWLVTKKGEAMVS*PILPVS
Trigger: GCTCACTGGGAGGATAGGGCAGCTGACCATGGCCTC...TCCTTTCTTTGTCACCAGCCAAGGCATTGATAACCAAGTAGCCATTTTCCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp TTGTTAATAAACACGCTCAATGCCTCCAATCCTGTCCCTGAGGATAATCATGAAGGGCCAAGGTCAGCCTaGCTTTGCAAGGCCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LLINTLNASNPVPEDNHEGPRSA*LCKACS
Trigger: GCTGCAGGCCTTGCAAAGCCAGGCTGACCTTGGCCC...TTCATGATTATCCTCAGGGACAGGATTGGAGGCATTGAGCGTGTTTATTAACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp ATTGGCAACGGCTGCCCACTAGGGGCACTGCCACTTGCCTGGCTCAAACTTCAGTGTGATCTAAGAACTTaGTATTGTTGGCAAACATGC +
Preference number: 4 (lower is better)
Translates to: IGNGCPLGALPLAWLKLQCDLRT*YCWQTC
Trigger: GCATGTTTGCCAACAATACCAAGTTCTTAGATCACA...CTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp TGCAAACCCAGGCCAGAGTGGACCACACTGCTCTCGGCACCACTCCTAAAGGCAACCTTAAGAGGAAAATaGCTACTTGGTTATCAATGC +
Preference number: 4 (lower is better)
Translates to: CKPRPEWTTLLSAPLLKATLRGK*LLGYQC
Trigger: GCATTGATAACCAAGTAGCCATTTTCCTCTTAAGGT...TGCCTTTAGGAGTGGTGCCGAGAGCAGTGTGGTCCACTCTGGCCTGGGTTTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp CATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAAGCTCCTCTTCTGGGTaGCTGTATCTCCTCATTACC +
Preference number: 4 (lower is better)
Translates to: HGNGIRSENSEVSPRGGGSSSSG*LYLLIT
Trigger: GGTAATGAGGAGATACAGCCACCCAGAAGAGGAGCT...TCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp GCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGAAGACAACAGGACAGATTCAGCTCCTCTTCTaGGTGGCTGTATCTCCTCAT +
Preference number: 4 (lower is better)
Translates to: ALRIAKFHQGEEEKTTGQIQLLF*VAVSPH
Trigger: ATGAGGAGATACAGCCACCCAGAAGAGGAGCTGAAT...CTGTCCTGTTGTCTTCTCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp GGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGAAGAACTTTTCCATGGTTaGGCACACAAAGGAGCAGGA +
Preference number: 4 (lower is better)
Translates to: GNGIRSENSEVSPRGGGEELFHG*AHKGAG
Trigger: TCCTGCTCCTTTGTGTGCTCAACCATGGAAAAGTTC...TTCTCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGCGTATGCCATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp CATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGTCTGGCGACGGATGTaGTCTAAGAACTTGGTATTG +
Preference number: 4 (lower is better)
Translates to: HGNGIRSENSEVSPRGGGVWRRM*SKNLVL
Trigger: CAATACCAAGTTCTTAGATCACATCCGTCGCCAGAC...TCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp CATTCAGACACACAATTTTCTAGTTTGGTTCCTGGACCACTTGATTGCCTCCCTAGGGGCACTGCCACTTaGCTGGCTCAAACTTCAGGA +
Preference number: 4 (lower is better)
Translates to: HSDTQFSSLVPGPLDCLPRGTAT*LAQTSG
Trigger: TCCTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCT...AGGGAGGCAATCAAGTGGTCCAGGAACCAAACTAGAAAATTGTGTGTCTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp AAGAGGAAAATGGCTACTTGGTTATCAATGCCTTGGCTGGTGACAAAGAAAGGAATGACGTTCCGGCTCTaGAAGTCCAGGATGCAGGGG +
Preference number: 4 (lower is better)
Translates to: KRKMATWLSMPWLVTKKGMTFRL*KSRMQG
Trigger: CCCCTGCATCCTGGACTTCCAGAGCCGGAACGTCAT...TCCTTTCTTTGTCACCAGCCAAGGCATTGATAACCAAGTAGCCATTTTCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp GGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGAAGCAATAGCCGCTCTGTaGCAAATCTCTTGGAACAGT +
Preference number: 4 (lower is better)
Translates to: GNGIRSENSEVSPRGGGEAIAAL*QISWNS
Trigger: ACTGTTCCAAGAGATTTGCCACAGAGCGGCTATTGC...TTCTCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGCGTATGCCATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp CATTCAGACACACAATTTTCTAGTTTGGTTCCTGGACCACTTGATTGCCTCCCTGAGGGCCACTTGAACTaGTGCTTCTTGCGAAGGTGC +
Preference number: 4 (lower is better)
Translates to: HSDTQFSSLVPGPLDCLPEGHLN*CFLRRC
Trigger: GCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTC...AGGGAGGCAATCAAGTGGTCCAGGAACCAAACTAGAAAATTGTGTGTCTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp AAGAGGAAAATGGCTACTTGGTTATCAATGCCTTGGCTGGTGACAAAGAAAGGAAAACCCAGGCCAGAGTaGACCACACTGCTCTCGGCA +
Preference number: 4 (lower is better)
Translates to: KRKMATWLSMPWLVTKKGKPRPE*TTLLSA
Trigger: TGCCGAGAGCAGTGTGGTCCACTCTGGCCTGGGTTT...TCCTTTCTTTGTCACCAGCCAAGGCATTGATAACCAAGTAGCCATTTTCCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp CATTCAGACACACAATTTTCTAGTTTGGTTCCTGGACCACTTGATTGCCTCCCTTGCTGCTGCAGGTGCTaGGTGACATGCTCAAAGAAC +
Preference number: 4 (lower is better)
Translates to: HSDTQFSSLVPGPLDCLPCCCRC*VTCSKN
Trigger: GTTCTTTGAGCATGTCACTCAGCACCTGCAGCAGCA...AGGGAGGCAATCAAGTGGTCCAGGAACCAAACTAGAAAATTGTGTGTCTGAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp TTTAACAAGAACACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGGGTTGTTGCCCCGTGTaGAGCATTTGTCACACACAT +
Preference number: 4 (lower is better)
Translates to: FNKNTHIQDPLKESRVLRGCCPV*SICHTH
Trigger: ATGTGTGTGACAAATGCTTCACACGGGGCAACAACC...CCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGTGTTCTTGTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp TTTAACAAGAACACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGGTTGTCCTTGCCGACTaGTTCGTATTCACAGCACAG +
Preference number: 4 (lower is better)
Translates to: FNKNTHIQDPLKESRVLRVVLAD*FVFTAQ
Trigger: CTGTGCTGTGAATACGAAGCAGTCGGCAAGGACAAC...CCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGTGTTCTTGTTAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp AAGAGGAAAATGGCTACTTGGTTATCAATGCCTTGGCTGGTGACAAAGAAAGGATGCTTCTTGCGAAGGTaGACGGTGAGGTTGTTGCCC +
Preference number: 4 (lower is better)
Translates to: KRKMATWLSMPWLVTKKGCFLRR*TVRLLP
Trigger: GGGCAACAACCTCACCGTGCACCTTCGCAAGAAGCA...TCCTTTCTTTGTCACCAGCCAAGGCATTGATAACCAAGTAGCCATTTTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp AAGAGGAAAATGGCTACTTGGTTATCAATGCCTTGGCTGGTGACAAAGAAAGGAATTGCCTCCCTTCCCTaGGAGGCTTCCCAATCCTCT +
Preference number: 4 (lower is better)
Translates to: KRKMATWLSMPWLVTKKGIASLP*EASQSS
Trigger: AGAGGATTGGGAAGCCTCCCAGGGAAGGGAGGCAAT...TCCTTTCTTTGTCACCAGCCAAGGCATTGATAACCAAGTAGCCATTTTCCTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp TTTAACAAGAACACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGAATCTCTTGGAACAGTaGGAACACTGGAAGTGCTGC +
Preference number: 4 (lower is better)
Translates to: FNKNTHIQDPLKESRVLRNLLEQ*EHWKCC
Trigger: GCAGCACTTCCAGTGTTCTCACTGTTCCAAGAGATT...CCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGTGTTCTTGTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp AAGAGGAAAATGGCTACTTGGTTATCAATGCCTTGGCTGGTGACAAAGAAAGGACAATGCCTTGGCTGGTaGCAAAGAAAGGACCCTTGC +
Preference number: 4 (lower is better)
Translates to: KRKMATWLSMPWLVTKKGQCLGW*QRKDPC
Trigger: GCAAGGGTCCTTTCTTTGTCACCAGCCAAGGCATTG...TCCTTTCTTTGTCACCAGCCAAGGCATTGATAACCAAGTAGCCATTTTCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp CAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCAAAAGCCACATTCCTaGCACAAGCAGGAGAATTCT +
Preference number: 4 (lower is better)
Translates to: QTPGTSMEMAYALRIAKFQKPHS*HKQENS
Trigger: AGAATTCTCCTGCTTGTGGCAGGAATGTGGCTTTTG...AAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp TTGTTAATAAACACGCTCAATGCCTCCAATCCTGTCCCTGAGGATAATCATGAATCTCCTGGGTATGGCTaGGGAGGTGCTCTCGAAGTT +
Preference number: 4 (lower is better)
Translates to: LLINTLNASNPVPEDNHESPGYG*GGALEV
Trigger: AACTTCGAGAGCACCTCCGCAGCCATACCCAGGAGA...TTCATGATTATCCTCAGGGACAGGATTGGAGGCATTGAGCGTGTTTATTAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp TTTAACAAGAACACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGAGTGATTCACATGGTTaGGCATGTGGTCCCGCAATA +
Preference number: 4 (lower is better)
Translates to: FNKNTHIQDPLKESRVLRSDSHG*ACGPAI
Trigger: TATTGCGGGACCACATGCGCAACCATGTGAATCACT...CCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGTGTTCTTGTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp TTGTTAATAAACACGCTCAATGCCTCCAATCCTGTCCCTGAGGATAATCATGAAGGTTGCCGCAGCAGTTaGTGTGTCAGCTCTACACTC +
Preference number: 4 (lower is better)
Translates to: LLINTLNASNPVPEDNHEGCRSS*CVSSTL
Trigger: GAGTGTAGAGCTGACACAGCAACTGCTGCGGCAACC...TTCATGATTATCCTCAGGGACAGGATTGGAGGCATTGAGCGTGTTTATTAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp TTTAACAAGAACACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGGAATTCTTCCTCAAGTaGGTCATCCTCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: FNKNTHIQDPLKESRVLREFFLK*VILLFL
Trigger: GAGGAAGAGGAGGATGACCCACTTGAGGAAGAATTC...CCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGTGTTCTTGTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp CATTCAGACACACAATTTTCTAGTTTGGTTCCTGGACCACTTGATTGCCTCCCTCCCACTGTTTCAGCTTaGTGTGGTAGCAGTGGAAGT +
Preference number: 4 (lower is better)
Translates to: HSDTQFSSLVPGPLDCLPPTVSA*CGSSGS
Trigger: ACTTCCACTGCTACCACACCAAGCTGAAACAGTGGG...AGGGAGGCAATCAAGTGGTCCAGGAACCAAACTAGAAAATTGTGTGTCTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp CATTCAGACACACAATTTTCTAGTTTGGTTCCTGGACCACTTGATTGCCTCCCTCACAGACACAGGAAGTaGTCAGGGATATCAGGGATG +
Preference number: 4 (lower is better)
Translates to: HSDTQFSSLVPGPLDCLPHRHRK*SGISGM
Trigger: CATCCCTGATATCCCTGACCACTTCCTGTGTCTGTG...AGGGAGGCAATCAAGTGGTCCAGGAACCAAACTAGAAAATTGTGTGTCTGAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp CATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGTATCCAGGTGCTTCTaGAGGTCAATAAGATTCTTG +
Preference number: 4 (lower is better)
Translates to: HGNGIRSENSEVSPRGGGVSRCF*RSIRFL
Trigger: CAAGAATCTTATTGACCTCCAGAAGCACCTGGATAC...TCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp GGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGAAATGACATTTGTACCTTaGCTCAGAGTCTCCTTCATG +
Preference number: 4 (lower is better)
Translates to: GNGIRSENSEVSPRGGGEMTFVP*LRVSFM
Trigger: CATGAAGGAGACTCTGAGCCAAGGTACAAATGTCAT...TTCTCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGCGTATGCCATTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp GCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGAAGACAACAGGACAGCCACAAAATGTAGTCTaGCAGAAAAGGGAAGTCTTT +
Preference number: 4 (lower is better)
Translates to: ALRIAKFHQGEEEKTTGQPQNVV*QKREVF
Trigger: AAAGACTTCCCTTTTCTGCCAGACTACATTTTGTGG...CTGTCCTGTTGTCTTCTCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp CATTCAGACACACAATTTTCTAGTTTGGTTCCTGGACCACTTGATTGCCTCCCTCTGTGGGTATCCAGGTaGTTCTGGAGGTCAATAAGA +
Preference number: 4 (lower is better)
Translates to: HSDTQFSSLVPGPLDCLPLWVSR*FWRSIR
Trigger: TCTTATTGACCTCCAGAAGCACCTGGATACCCACAG...AGGGAGGCAATCAAGTGGTCCAGGAACCAAACTAGAAAATTGTGTGTCTGAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp CAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTGAAGTCTTTAGAGTCTaGAGAATGATGCAAACCCAG +
Preference number: 4 (lower is better)
Translates to: QTPGTSMEMAYALRIAKFEVFRV*RMMQTQ
Trigger: CTGGGTTTGCATCATTCTGCAGACTCTAAAGACTTC...AAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp TTTAACAAGAACACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGCATTTGTCACACACATaGCATTTGTACCTTGGCTCA +
Preference number: 4 (lower is better)
Translates to: FNKNTHIQDPLKESRVLRHLSHT*HLYLGS
Trigger: TGAGCCAAGGTACAAATGTCATGTGTGTGACAAATG...CCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGTGTTCTTGTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp TTGTTAATAAACACGCTCAATGCCTCCAATCCTGTCCCTGAGGATAATCATGAAGTGCTGAGAAGCAGCTaGACCAGACGAAATGATGAT +
Preference number: 4 (lower is better)
Translates to: LLINTLNASNPVPEDNHEVLRSS*TRRNDD
Trigger: ATCATCATTTCGTCTGGTTCAGCTGCTTCTCAGCAC...TTCATGATTATCCTCAGGGACAGGATTGGAGGCATTGAGCGTGTTTATTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR TCA 90 bp AAGAGGAAAATGGCTACTTGGTTATCAATGCCTTGGCTGGTGACAAAGAAAGGAAGATGGGAATGGATGTaGGCTAAGGATTTAATCACT +
Preference number: 4 (lower is better)
Translates to: KRKMATWLSMPWLVTKKGRWEWM*AKDLIT
Trigger: AGTGATTAAATCCTTAGCTCACATCCATTCCCATCT...TCCTTTCTTTGTCACCAGCCAAGGCATTGATAACCAAGTAGCCATTTTCCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp TTGTTAATAAACACGCTCAATGCCTCCAATCCTGTCCCTGAGGATAATCATGAAAGGAAAATGGCTACTTaGTTATCAATGCCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLINTLNASNPVPEDNHERKMAT*LSMPWL
Trigger: CAGCCAAGGCATTGATAACCAAGTAGCCATTTTCCT...TTCATGATTATCCTCAGGGACAGGATTGGAGGCATTGAGCGTGTTTATTAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp AAGAGGAAAATGGCTACTTGGTTATCAATGCCTTGGCTGGTGACAAAGAAAGGAAATCATGAAAGTCCTTaGGGTTGTAGAGGAAACCTT +
Preference number: 4 (lower is better)
Translates to: KRKMATWLSMPWLVTKKGNHESP*GCRGNL
Trigger: AAGGTTTCCTCTACAACCCCAAGGACTTTCATGATT...TCCTTTCTTTGTCACCAGCCAAGGCATTGATAACCAAGTAGCCATTTTCCTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR GCA 90 bp TTGTTAATAAACACGCTCAATGCCTCCAATCCTGTCCCTGAGGATAATCATGAAAGATGTGTGCCACCATaGCCAGCTGATTTTTATATT +
Preference number: 4 (lower is better)
Translates to: LLINTLNASNPVPEDNHERCVPP*PADFYI
Trigger: AATATAAAAATCAGCTGGGCATGGTGGCACACATCT...TTCATGATTATCCTCAGGGACAGGATTGGAGGCATTGAGCGTGTTTATTAACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CCA 90 bp TTGTTAATAAACACGCTCAATGCCTCCAATCCTGTCCCTGAGGATAATCATGAACACAATTTTCTAGTTTaGTTCCTGGACCACTTGATT +
Preference number: 4 (lower is better)
Translates to: LLINTLNASNPVPEDNHEHNFLV*FLDHLI
Trigger: AATCAAGTGGTCCAGGAACCAAACTAGAAAATTGTG...TTCATGATTATCCTCAGGGACAGGATTGGAGGCATTGAGCGTGTTTATTAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS CCA 90 bp CACTCGCAGTCCCGCAGGCTTCCCGGAATCCTTCACGCTAAGGCGTaGCGGCGACCGAGTCTCAGCCGCAGCGAAGCCCCTAGACGTCTG +
Preference number: 5 (lower is better)
Translates to: HSQSRRLPGILHAKA*RRPSLSRSEAPRRL
Trigger: CAGACGTCTAGGGGCTTCGCTGCGGCTGAGACTCGGTCGCCGCCACGCCTTAGCGTGAAGGATTCCGGGAAGCCTGCGGGACTGCGAGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529988.5
CDS-3UTR CAA 90 bp GCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTGCTGTGTCACAGGCCCGATCCCTCTaGTGGTTGCCGCAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: ATFPGPIPLVVAAAVAVSQARSL*WLPQQL
Trigger: CAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTG...TGACACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS CCA 90 bp ACGTTCCGGCTCTGGAAGTCCAGGATGCAGGGGCCAAGGTCAGCCTaGCTTTGCAAGGCCTGCAGCCCCCACTGTTTCAGCTTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: TFRLWKSRMQGPRSA*LCKACSPHCFSLVW
Trigger: CCACACCAAGCTGAAACAGTGGGGGCTGCAGGCCTTGCAAAGCCAGGCTGACCTTGGCCCCTGCATCCTGGACTTCCAGAGCCGGAACGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000529354.1
ENST00000531022.5
ENST00000531360.5
ENST00000532312.2
CDS-3UTR CAA 90 bp GCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGAGGTGCACGGTGAGGTaGTTGCCCCGTGTGAAGCAT +
Preference number: 5 (lower is better)
Translates to: AALVQRRSQARSLLWLPQRCTVR*LPRVKH
Trigger: ATGCTTCACACGGGGCAACAACCTCACCGTGCACCT...CTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CAA 90 bp CTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTGTCCCTTCGCTACCCTaGCCCTCCTCTTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: LSFSDVPRPDPSCGCRSSVPSLP*PSSSSS
Trigger: GGAAGAGGAAGAGGAGGGCAAGGGTAGCGAAGGGAC...ACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS CCA 90 bp CAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTaGTTGCCGCAGCAGTTGCTGTGTCAGCTCTACACTCTCGTAGCG +
Preference number: 5 (lower is better)
Translates to: QAALVQRRSQARSLL*LPQQLLCQLYTLVA
Trigger: CGCTACGAGAGTGTAGAGCTGACACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350777.7
ENST00000527410.3
ENST00000527755.5
ENST00000529808.1
CDS-3UTR CAA 90 bp GCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGTGCACGGTGAGGTTGTaGCCCCGTGTGAAGCATTTG +
Preference number: 5 (lower is better)
Translates to: AALVQRRSQARSLLWLPQCTVRL*PRVKHL
Trigger: CAAATGCTTCACACGGGGCAACAACCTCACCGTGCA...CTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CAA 90 bp GACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTGCTGTGTCAGCTGCCCTGAGGGCCACTaGAACTGGTGCTTCTTGCGA +
Preference number: 5 (lower is better)
Translates to: DVPRPDPSCGCRSSCCVSCPEGH*NWCFLR
Trigger: TCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGGCA...GCTGACACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CAA 90 bp GCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGTGGTTGCCGCAGCAGTaGCTGTGTCAGCTCTACACT +
Preference number: 5 (lower is better)
Translates to: AALVQRRSQARSLLWLPQWLPQQ*LCQLYT
Trigger: AGTGTAGAGCTGACACAGCAACTGCTGCGGCAACCA...CTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CAA 90 bp GACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTGCTGTGTCAGCCGATCCCTCTTGTGGTaGCCGCAGCAGTTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: DVPRPDPSCGCRSSCCVSRSLLW*PQQLLC
Trigger: ACACAGCAACTGCTGCGGCAACCACAAGAGGGATCG...GCTGACACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS TCA 90 bp CACAGTGCTCCCACAGACACAGGAAGTGGTCAGGGATATCAGGGATaGCGTTCCGGCTCTGGAAGTCCAGGATGCAGGGGCCAAGGTCAG +
Preference number: 5 (lower is better)
Translates to: HSAPTDTGSGQGYQG*RSGSGSPGCRGQGQ
Trigger: CTGACCTTGGCCCCTGCATCCTGGACTTCCAGAGCCGGAACGTCATCCCTGATATCCCTGACCACTTCCTGTGTCTGTGGGAGCACTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000529354.1
ENST00000531022.5
ENST00000531360.5
ENST00000532312.2
CDS GCA 90 bp CAGGTGGGGCAGGCTACCACTTTCTCCTGGGTATGGCTGCGGAGGTaGTCTCGAAGTTTACTGCGGTCCTTGAAGGTGCAGGTACAGCCT +
Preference number: 5 (lower is better)
Translates to: QVGQATTFSWVWLRR*SRSLLRSLKVQVQP
Trigger: AGGCTGTACCTGCACCTTCAAGGACCGCAGTAAACTTCGAGAGCACCTCCGCAGCCATACCCAGGAGAAAGTGGTAGCCTGCCCCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000527755.5
ENST00000529610.1
ENST00000529808.1
ENST00000531022.5
CDS CCA 90 bp GGTTGCGCATGTGGTCCCGCAATAGCCGCTCTGTGGCAAATCTCTTaGAACAGTGAGAACACTGGAAGTGCTGCTCTGGGGTGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: GCACGPAIAALWQIS*NSENTGSAALGWGR
Trigger: CCTGCCCCACCCCAGAGCAGCACTTCCAGTGTTCTCACTGTTCCAAGAGATTTGCCACAGAGCGGCTATTGCGGGACCACATGCGCAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527755.5
CDS CCA 90 bp CTAAGCAGTGGGGCCCGCACCACGCCTCGAAGGACAGGTAGAATTTaGACAGAAGGAAGGAGACCGTCCCGTTGGGCAAAACCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: LSSGARTTPRRTGRI*TEGRRPSRWAKPLH
Trigger: GTGGAGAGGTTTTGCCCAACGGGACGGTCTCCTTCCTTCTGTCCAAATTCTACCTGTCCTTCGAGGCGTGGTGCGGGCCCCACTGCTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000529988.5
CDS-3UTR CAA 90 bp TTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTGCTGTACCACCGGGTTGTCCTaGCCGACTGCTTCGTATTCA +
Preference number: 5 (lower is better)
Translates to: FSDVPRPDPSCGCRSSCCTTGLS*PTASYS
Trigger: TGAATACGAAGCAGTCGGCAAGGACAACCCGGTGGT...ACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CAA 90 bp GACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTGCTGTGTCAGCAGTTTACTGCGGTCCTaGAAGGTGCAGGTACAGCCT +
Preference number: 5 (lower is better)
Translates to: DVPRPDPSCGCRSSCCVSSLLRS*KVQVQP
Trigger: AGGCTGTACCTGCACCTTCAAGGACCGCAGTAAACT...GCTGACACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CAA 90 bp TTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTTGCTGTTTGAACTGGTGCTTCTaGCGAAGGTGCACGGTGAGG +
Preference number: 5 (lower is better)
Translates to: FSDVPRPDPSCGCRSSCCLNWCF*RRCTVR
Trigger: CCTCACCGTGCACCTTCGCAAGAAGCACCAGTTCAA...ACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CAA 90 bp CCTTGCAGGGACCAGTCACATGCCATCCTTGGGCCTAAGGAGCCCGAAAGATGGCGATCCCTCTTGTGGTaGCCGCAGCAGTTGCTGTGT +
Preference number: 5 (lower is better)
Translates to: PCRDQSHAILGPKEPERWRSLLW*PQQLLC
Trigger: ACACAGCAACTGCTGCGGCAACCACAAGAGGGATCG...CCATCTTTCGGGCTCCTTAGGCCCAAGGATGGCATGTGACTGGTCCCTGCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CAA 90 bp CCTTGCAGGGACCAGTCACATGCCATCCTTGGGCCTAAGGAGCCCGAAAGATGGTGGTTCCTGGACCACTaGATTGCCTCCCTTCCCTGG +
Preference number: 5 (lower is better)
Translates to: PCRDQSHAILGPKEPERWWFLDH*IASLPW
Trigger: CCAGGGAAGGGAGGCAATCAAGTGGTCCAGGAACCA...CCATCTTTCGGGCTCCTTAGGCCCAAGGATGGCATGTGACTGGTCCCTGCAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS TCA 90 bp CCTGGGTATGGCTGCGGAGGTGCTCTCGAAGTTTACTGCGGTCCTTaGAGGTGCAGGTACAGCCTGGGAAGGAAGCCCTATCAGTCTCCT +
Preference number: 5 (lower is better)
Translates to: PGYGCGGALEVYCGP*RCRYSLGRKPYQSP
Trigger: AGGAGACTGATAGGGCTTCCTTCCCAGGCTGTACCTGCACCTTCAAGGACCGCAGTAAACTTCGAGAGCACCTCCGCAGCCATACCCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527755.5
CDS GCA 90 bp CGGGGATGCCCTGAGGGCCACTTGAACTGGTGCTTCTTGCGAAGGTaGACGGTGAGGTTGTTGCCCCGTGTGAAGCATTTGTCACACACA +
Preference number: 5 (lower is better)
Translates to: RGCPEGHLNWCFLRR*TVRLLPRVKHLSHT
Trigger: TGTGTGTGACAAATGCTTCACACGGGGCAACAACCTCACCGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGGCATCCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350777.7
ENST00000527410.3
ENST00000527755.5
ENST00000529808.1
ENST00000532860.1
CDS CCA 90 bp CGAAGGACAGGTAGAATTTGGACAGAAGGAAGGAGACCGTCCCGTTaGGCAAAACCTCTCCACTCGCAGTCCCGCAGGCTTCCCGGAATC +
Preference number: 5 (lower is better)
Translates to: RRTGRIWTEGRRPSR*AKPLHSQSRRLPGI
Trigger: GATTCCGGGAAGCCTGCGGGACTGCGAGTGGAGAGGTTTTGCCCAACGGGACGGTCTCCTTCCTTCTGTCCAAATTCTACCTGTCCTTCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529988.5
CDS-3UTR CAA 90 bp CAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGAGAACTTTTCCATGGTaGAGCACACAAAGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: QAALVQRRSQARSLLWLPRTFPW*STQRSR
Trigger: CCTGCTCCTTTGTGTGCTCAACCATGGAAAAGTTCT...CGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CAA 90 bp GCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGAAGAACTTGGTATTGTaGGCAAACATGCCCCCACAG +
Preference number: 5 (lower is better)
Translates to: ALVQRRSQARSLLWLPQQKNLVL*ANMPPQ
Trigger: CTGTGGGGGCATGTTTGCCAACAATACCAAGTTCTT...CTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CAA 90 bp ATTGGCAACGGCTGCCCACTAGGGGCACTGCCACTTGCCTGGCTCAAACTTCAGTTGAACTGGTGCTTCTaGCGAAGGTGCACGGTGAGG +
Preference number: 5 (lower is better)
Translates to: IGNGCPLGALPLAWLKLQLNWCF*RRCTVR
Trigger: CCTCACCGTGCACCTTCGCAAGAAGCACCAGTTCAA...CTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS TCA 90 bp CGATCTCTTGCTGGCCTTGGGCATTGGTCTGATTCACCACGTGGATaGCAGAACTGGGGTTGTCCTGAGAGGCTGAGAGGGCTGTCCCTT +
Preference number: 5 (lower is better)
Translates to: RSLAGLGHWSDSPRG*QNWGCPERLRGLSL
Trigger: AAGGGACAGCCCTCTCAGCCTCTCAGGACAACCCCAGTTCTGTCATCCACGTGGTGAATCAGACCAATGCCCAAGGCCAGCAAGAGATCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350777.7
ENST00000527755.5
CDS GCA 90 bp GCTTCCTTCCACCCCAATTACTGGCACTGCCTGCTGACCTCACAGTaGTCCCACAGACACAGGAAGTGGTCAGGGATATCAGGGATGACG +
Preference number: 5 (lower is better)
Translates to: ASFHPNYWHCLLTSQ*SHRHRKWSGISGMT
Trigger: CGTCATCCCTGATATCCCTGACCACTTCCTGTGTCTGTGGGAGCACTGTGAGGTCAGCAGGCAGTGCCAGTAATTGGGGTGGAAGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529354.1
CDS GCA 90 bp GGCGGCATGGCCTTCACCCTAGAGGAAGAGGAAGAAATCCACAGCTaGAAGAATTCCACCCAGGTGCTGCTGAGGGCAAAAAGCTGGGCA +
Preference number: 5 (lower is better)
Translates to: GGMAFTLEEEEEIHS*KNSTQVLLRAKSWA
Trigger: TGCCCAGCTTTTTGCCCTCAGCAGCACCTGGGTGGAATTCTTGCAGCTGTGGATTTCTTCCTCTTCCTCTAGGGTGAAGGCCATGCCGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532312.2
CDS CCA 90 bp GCACTGCCACTTGCCTGGCTCAAACTTCAGGACCTGGGGAAGAAATaGTCTGGCTCTGCGGCCTTCAAACCATCTGGATCTCTGGCTCCT +
Preference number: 5 (lower is better)
Translates to: ALPLAWLKLQDLGKK*SGSAAFKPSGSLAP
Trigger: AGGAGCCAGAGATCCAGATGGTTTGAAGGCCGCAGAGCCAGACCATTTCTTCCCCAGGTCCTGAAGTTTGAGCCAGGCAAGTGGCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350777.7
ENST00000527755.5
CDS-3UTR CAA 90 bp ATTGGCAACGGCTGCCCACTAGGGGCACTGCCACTTGCCTGGCTCAAACTTCAGAGTTTACTGCGGTCCTaGAAGGTGCAGGTACAGCCT +
Preference number: 5 (lower is better)
Translates to: IGNGCPLGALPLAWLKLQSLLRS*KVQVQP
Trigger: AGGCTGTACCTGCACCTTCAAGGACCGCAGTAAACT...CTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CAA 90 bp GCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCTCTAAGAACTTGGTATaGTTGGCAAACATGCCCCCA +
Preference number: 5 (lower is better)
Translates to: AGCSRSATFPGPIPLVVASKNLV*LANMPP
Trigger: TGGGGGCATGTTTGCCAACAATACCAAGTTCTTAGA...GGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CAA 90 bp TGCAAACCCAGGCCAGAGTGGACCACACTGCTCTCGGCACCACTCCTAAAGGCAGATCTCTTGCTGGCCTaGGGCATTGGTCTGATTCAC +
Preference number: 5 (lower is better)
Translates to: CKPRPEWTTLLSAPLLKADLLLA*GIGLIH
Trigger: GTGAATCAGACCAATGCCCAAGGCCAGCAAGAGATC...TGCCTTTAGGAGTGGTGCCGAGAGCAGTGTGGTCCACTCTGGCCTGGGTTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS TCA 90 bp ATGTGGTCCCGCAATAGCCGCTCTGTGGCAAATCTCTTGGAACAGTaGGAACACTGGAAGTGCTGCTCTGGGGTGGGGCAGGCAGAAGAA +
Preference number: 5 (lower is better)
Translates to: MWSRNSRSVANLLEQ*EHWKCCSGVGQAEE
Trigger: TTCTTCTGCCTGCCCCACCCCAGAGCAGCACTTCCAGTGTTCTCACTGTTCCAAGAGATTTGCCACAGAGCGGCTATTGCGGGACCACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527755.5
CDS GCA 90 bp TCAGAGTTAAGACCCCCAGCTTCCTTCCACCCCAATTACTGGCACTaGCTGCTGACCTCACAGTGCTCCCACAGACACAGGAAGTGGTCA +
Preference number: 5 (lower is better)
Translates to: SELRPPASFHPNYWH*LLTSQCSHRHRKWS
Trigger: TGACCACTTCCTGTGTCTGTGGGAGCACTGTGAGGTCAGCAGGCAGTGCCAGTAATTGGGGTGGAAGGAAGCTGGGGGTCTTAACTCTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529354.1
CDS GCA 90 bp GTACCACTGCACTCTAGCCTGGGCTTCAGATCAAGAGCCTCACAGTaGTCCCACAGACACAGGAAGTGGTCAGGGATATCAGGGATGACG +
Preference number: 5 (lower is better)
Translates to: VPLHSSLGFRSRASQ*SHRHRKWSGISGMT
Trigger: CGTCATCCCTGATATCCCTGACCACTTCCTGTGTCTGTGGGAGCACTGTGAGGCTCTTGATCTGAAGCCCAGGCTAGAGTGCAGTGGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531360.5
ENST00000532312.2
CDS-3UTR CAA 90 bp CTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCATGACATTTGTACCTaGGCTCAGAGTCTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: LQAALVQRRSQARSLLWLHDICT*AQSLLH
Trigger: ATGAAGGAGACTCTGAGCCAAGGTACAAATGTCATG...CAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS-3UTR CAA 90 bp ATTGGCAACGGCTGCCCACTAGGGGCACTGCCACTTGCCTGGCTCAAACTTCAGCCATCTTCATGTTCCTaGTACCGAAAACGGGGATGC +
Preference number: 5 (lower is better)
Translates to: IGNGCPLGALPLAWLKLQPSSCS*YRKRGC
Trigger: GCATCCCCGTTTTCGGTACAAGGAACATGAAGATGG...CTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS TCA 90 bp CCAGCTGCAGCCGCATATAGCCATCTTCATGTTCCTTGTACCTGGTaGGGTAGGAGCATAAAGGGCAGCAAACCCAGGCAGGGGGATACA +
Preference number: 5 (lower is better)
Translates to: PAAAAYSHLHVPCTW*GRSIKGSKPRQGDT
Trigger: TGTATCCCCCTGCCTGGGTTTGCTGCCCTTTATGCTCCTACCTCACCAGGTACAAGGAACATGAAGATGGCTATATGCGGCTGCAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS TCA 90 bp AAGAGGAAGAAATCCACAGCTGCAAGAATTCCACCCAGGTGCTGCTaGGGGCAAAAAGCTGGGCAGGCAGCCTGCCTAGAATCAGCACGT +
Preference number: 5 (lower is better)
Translates to: KRKKSTAARIPPRCC*GQKAGQAACLESAR
Trigger: ACGTGCTGATTCTAGGCAGGCTGCCTGCCCAGCTTTTTGCCCTCAGCAGCACCTGGGTGGAATTCTTGCAGCTGTGGATTTCTTCCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532312.2
CDS GCA 90 bp TCTGGCGACGGATGTGATCTAAGAACTTGGTATTGTTGGCAAACATaGCCCCACAGGTGGGGCAGGCTACCACTTTCTCCTGGGTATGGC +
Preference number: 5 (lower is better)
Translates to: SGDGCDLRTWYCWQT*PHRWGRLPLSPGYG
Trigger: GCCATACCCAGGAGAAAGTGGTAGCCTGCCCCACCTGTGGGGGCATGTTTGCCAACAATACCAAGTTCTTAGATCACATCCGTCGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000527755.5
ENST00000529808.1
ENST00000531022.5
CDS GCA 90 bp TGCCTGGCTCAAACTTCAGGACCTGGGGAAGAAATGGTCTGGCTCTaGGGCCTTCAAACCATCTGGATCTCTGGCTCCTCAGCTATTCCT +
Preference number: 5 (lower is better)
Translates to: CLAQTSGPGEEMVWL*GLQTIWISGSSAIP
Trigger: AGGAATAGCTGAGGAGCCAGAGATCCAGATGGTTTGAAGGCCGCAGAGCCAGACCATTTCTTCCCCAGGTCCTGAAGTTTGAGCCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350777.7
ENST00000527755.5
CDS CCA 90 bp TGTGATCTAAGAACTTGGTATTGTTGGCAAACATGCCCCCACAGGTaGGGCAGGCTACCACTTTCTCCTGGGTATGGCTGCGGAGGTGCT +
Preference number: 5 (lower is better)
Translates to: CDLRTWYCWQTCPHR*GRLPLSPGYGCGGA
Trigger: AGCACCTCCGCAGCCATACCCAGGAGAAAGTGGTAGCCTGCCCCACCTGTGGGGGCATGTTTGCCAACAATACCAAGTTCTTAGATCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000527755.5
ENST00000529808.1
ENST00000531022.5
CDS CCA 90 bp GCTGCTGATCCAATGAGGTCTGGCGACGGATGTGATCTAAGAACTTaGTATTGTTGGCAAACATGCCCCCACAGGTGGGGCAGGCTACCA +
Preference number: 5 (lower is better)
Translates to: AADPMRSGDGCDLRT*YCWQTCPHRWGRLP
Trigger: TGGTAGCCTGCCCCACCTGTGGGGGCATGTTTGCCAACAATACCAAGTTCTTAGATCACATCCGTCGCCAGACCTCATTGGATCAGCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000350777.7
ENST00000527410.3
ENST00000531022.5
CDS-3UTR CAA 90 bp ATTGGCAACGGCTGCCCACTAGGGGCACTGCCACTTGCCTGGCTCAAACTTCAGAAGAACTTGGTATTGTaGGCAAACATGCCCCCACAG +
Preference number: 5 (lower is better)
Translates to: IGNGCPLGALPLAWLKLQKNLVL*ANMPPQ
Trigger: CTGTGGGGGCATGTTTGCCAACAATACCAAGTTCTT...CTGAAGTTTGAGCCAGGCAAGTGGCAGTGCCCCTAGTGGGCAGCCGTTGCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CAA 90 bp CACTCACAGCCAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATTGCCCTGAGGGCCACTaGAACTGGTGCTTCTTGCGA +
Preference number: 5 (lower is better)
Translates to: HSQPNTWDLHGNGIRSENCPEGH*NWCFLR
Trigger: TCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGGCA...ATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTGGCTGTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CAA 90 bp CAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCAGGCCCGATCCCTCTaGTGGTTGCCGCAGCAGTTG +
Preference number: 5 (lower is better)
Translates to: QTPGTSMEMAYALRIAKFQARSL*WLPQQL
Trigger: CAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTG...AAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS GCA 90 bp CGGATGAGGTCAGCAGAACTGTCCAGAGAACAAAAGCCACATTCCTaGCACAAGCAGGAGAATTCTTCCTCGTCTGTCGGCTCCAGGTCT +
Preference number: 5 (lower is better)
Translates to: RMRSAELSREQKPHS*HKQENSSSSVGSRS
Trigger: AGACCTGGAGCCGACAGACGAGGAAGAATTCTCCTGCTTGTGGCAGGAATGTGGCTTTTGTTCTCTGGACAGTTCTGCTGACCTCATCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000527354.5
ENST00000531360.5
CDS CCA 90 bp GGTTGCGCATGTGGTCCCGCAATAGCCGCTCTGTGGCAAATCTCTTaGAACAGTGAGAACACTGGAAGTGCTGCTGATCCAATGAGGTCT +
Preference number: 5 (lower is better)
Translates to: GCACGPAIAALWQIS*NSENTGSAADPMRS
Trigger: AGACCTCATTGGATCAGCAGCACTTCCAGTGTTCTCACTGTTCCAAGAGATTTGCCACAGAGCGGCTATTGCGGGACCACATGCGCAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350777.7
ENST00000527410.3
ENST00000531022.5
CDS CCA 90 bp CCTCATGATCCAATGAGGTCTGGCGACGGATGTGATCTAAGAACTTaGTATTGTTGGCAAACATGCCCCCACAGGTGGGGCAGGCTACCA +
Preference number: 5 (lower is better)
Translates to: PHDPMRSGDGCDLRT*YCWQTCPHRWGRLP
Trigger: TGGTAGCCTGCCCCACCTGTGGGGGCATGTTTGCCAACAATACCAAGTTCTTAGATCACATCCGTCGCCAGACCTCATTGGATCATGAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529808.1
CDS CCA 90 bp GTGCTCTCGAAGTTTACTGCGGTCCTTGAAGGTGCAGGTACAGCCTaGGAAGGAAGCCCTATCAGTCTCCTGCCACAAAACCCCAGTTTT +
Preference number: 5 (lower is better)
Translates to: VLSKFTAVLEGAGTA*EGSPISLLPQNPSF
Trigger: AAAACTGGGGTTTTGTGGCAGGAGACTGATAGGGCTTCCTTCCCAGGCTGTACCTGCACCTTCAAGGACCGCAGTAAACTTCGAGAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527755.5
CDS-3UTR CAA 90 bp CCTTGCAGGGACCAGTCACATGCCATCCTTGGGCCTAAGGAGCCCGAAAGATGGTCTAAGAACTTGGTATaGTTGGCAAACATGCCCCCA +
Preference number: 5 (lower is better)
Translates to: PCRDQSHAILGPKEPERWSKNLV*LANMPP
Trigger: TGGGGGCATGTTTGCCAACAATACCAAGTTCTTAGA...CCATCTTTCGGGCTCCTTAGGCCCAAGGATGGCATGTGACTGGTCCCTGCAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CAA 90 bp ACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGCTCCCCACAAAAAGTCACATGCCATCCTaGGGCCTAAGGAGCCCGAAA +
Preference number: 5 (lower is better)
Translates to: THIQDPLKESRVLRLPTKSHMPS*GLRSPK
Trigger: TTTCGGGCTCCTTAGGCCCAAGGATGGCATGTGACT...TTTTGTGGGGAGCCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS TCA 90 bp CCAGAAACAGACAGCAGAAATGGCCGGCACGCAAGTCCTCTGACTTaGGTTTCTGCAGTTCCTGATGAAGATGCTGCCTCTCGATCTGAC +
Preference number: 5 (lower is better)
Translates to: PETDSRNGRHASPLT*VSAVPDEDAASRSD
Trigger: GTCAGATCGAGAGGCAGCATCTTCATCAGGAACTGCAGAAACTCAAGTCAGAGGACTTGCGTGCCGGCCATTTCTGCTGTCTGTTTCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531022.5
CDS CCA 90 bp ACTTACGATCCAATGAGGTCTGGCGACGGATGTGATCTAAGAACTTaGTATTGTTGGCAAACATGCCCCCACAGGTGGGGCAGGCTACCA +
Preference number: 5 (lower is better)
Translates to: TYDPMRSGDGCDLRT*YCWQTCPHRWGRLP
Trigger: TGGTAGCCTGCCCCACCTGTGGGGGCATGTTTGCCAACAATACCAAGTTCTTAGATCACATCCGTCGCCAGACCTCATTGGATCGTAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000527354.5
ENST00000527755.5
CDS CCA 90 bp AGTGATTCACATGGTTGCGCATGTGGTCCCGCAATAGCCGCTCTGTaGCAAATCTCTTGGAACAGTGAGAACACTGGAAGTGCTGCTCTG +
Preference number: 5 (lower is better)
Translates to: SDSHGCACGPAIAAL*QISWNSENTGSAAL
Trigger: CAGAGCAGCACTTCCAGTGTTCTCACTGTTCCAAGAGATTTGCCACAGAGCGGCTATTGCGGGACCACATGCGCAACCATGTGAATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527755.5
CDS-3UTR CAA 90 bp TTTAACAAGAACACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGGTCCCTTCGCTACCCTaGCCCTCCTCTTCCTCTTCC +
Preference number: 5 (lower is better)
Translates to: FNKNTHIQDPLKESRVLRVPSLP*PSSSSS
Trigger: GGAAGAGGAAGAGGAGGGCAAGGGTAGCGAAGGGAC...CCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGTGTTCTTGTTAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS TCA 90 bp ACTGTTTCAGCTTGGTGTGGTAGCAGTGGAAGTAGACATGGCGGATaGGGTCAGCAGAACTGTCCAGAGAACAAAAGCCACATTCCTGCC +
Preference number: 5 (lower is better)
Translates to: TVSAWCGSSGSRHGG*GQQNCPENKSHIPA
Trigger: GGCAGGAATGTGGCTTTTGTTCTCTGGACAGTTCTGCTGACCTCATCCGCCATGTCTACTTCCACTGCTACCACACCAAGCTGAAACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000529354.1
ENST00000529988.5
ENST00000531022.5
ENST00000531360.5
ENST00000532312.2
CDS TCA 90 bp CTATGCCAGAAACAGACAGCAGAAATGGCCGGCACGCAAGTCCTCTaGCTTGAGTTTCTGCAGTTCCTGATGAAGATGCTGCCTCTCGAT +
Preference number: 5 (lower is better)
Translates to: LCQKQTAEMAGTQVL*LEFLQFLMKMLPLD
Trigger: ATCGAGAGGCAGCATCTTCATCAGGAACTGCAGAAACTCAAGTCAGAGGACTTGCGTGCCGGCCATTTCTGCTGTCTGTTTCTGGCATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531022.5
CDS GCA 90 bp CGGATGAGGTCAGCAGAACTGTCCAGAGAACAAAAGCCACATTCCTaGCACAAGCAGGAGAATTCTTCCTCAAGTGGGTCATCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: RMRSAELSREQKPHS*HKQENSSSSGSSSS
Trigger: AGAGGAGGATGACCCACTTGAGGAAGAATTCTCCTGCTTGTGGCAGGAATGTGGCTTTTGTTCTCTGGACAGTTCTGCTGACCTCATCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350777.7
ENST00000527410.3
ENST00000529354.1
ENST00000529988.5
ENST00000532312.2
CDS CCA 90 bp AGTGATTCACATGGTTGCGCATGTGGTCCCGCAATAGCCGCTCTGTaGCAAATCTCTTGGAACAGTGAGAACACTGGAAGTGCTGCTGAT +
Preference number: 5 (lower is better)
Translates to: SDSHGCACGPAIAAL*QISWNSENTGSAAD
Trigger: ATCAGCAGCACTTCCAGTGTTCTCACTGTTCCAAGAGATTTGCCACAGAGCGGCTATTGCGGGACCACATGCGCAACCATGTGAATCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000350777.7
ENST00000527410.3
ENST00000531022.5
CDS-3UTR CAA 90 bp AAGAGGAAAATGGCTACTTGGTTATCAATGCCTTGGCTGGTGACAAAGAAAGGACACAGCACCACCGGGTaGTCCTTGCCGACTGCTTCG +
Preference number: 5 (lower is better)
Translates to: KRKMATWLSMPWLVTKKGHSTTG*SLPTAS
Trigger: CGAAGCAGTCGGCAAGGACAACCCGGTGGTGCTGTG...TCCTTTCTTTGTCACCAGCCAAGGCATTGATAACCAAGTAGCCATTTTCCTCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CAA 90 bp TTTAACAAGAACACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGAGGTGCACGGTGAGGTaGTTGCCCCGTGTGAAGCAT +
Preference number: 5 (lower is better)
Translates to: FNKNTHIQDPLKESRVLRRCTVR*LPRVKH
Trigger: ATGCTTCACACGGGGCAACAACCTCACCGTGCACCT...CCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGTGTTCTTGTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CAA 90 bp TTTAACAAGAACACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGCGGGGTTTCACCATGTaGGCCAGGATGGTCTCCATC +
Preference number: 5 (lower is better)
Translates to: FNKNTHIQDPLKESRVLRRGFTM*ARMVSI
Trigger: GATGGAGACCATCCTGGCCAACATGGTGAAACCCCG...CCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGTGTTCTTGTTAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CAA 90 bp GCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGAGAAGACAACAGGACAGAGAACTTTTCCATGGTaGAGCACACAAAGGAGCAGG +
Preference number: 5 (lower is better)
Translates to: ALRIAKFHQGEEEKTTGQRTFPW*STQRSR
Trigger: CCTGCTCCTTTGTGTGCTCAACCATGGAAAAGTTCT...CTGTCCTGTTGTCTTCTCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CAA 90 bp TTTAACAAGAACACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGTGCACGGTGAGGTTGTaGCCCCGTGTGAAGCATTTG +
Preference number: 5 (lower is better)
Translates to: FNKNTHIQDPLKESRVLRCTVRL*PRVKHL
Trigger: CAAATGCTTCACACGGGGCAACAACCTCACCGTGCA...CCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGTGTTCTTGTTAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CAA 90 bp CAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTACAAAGAAAGGACCCTaGCAGGGACCAGTCACATGC +
Preference number: 5 (lower is better)
Translates to: QTPGTSMEMAYALRIAKFTKKGP*QGPVTC
Trigger: GCATGTGACTGGTCCCTGCAAGGGTCCTTTCTTTGT...AAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CAA 90 bp CATTCAGACACACAATTTTCTAGTTTGGTTCCTGGACCACTTGATTGCCTCCCTGCCCAGAGATCCTTTTaGGGCAGCTTCCTGTCCCCA +
Preference number: 5 (lower is better)
Translates to: HSDTQFSSLVPGPLDCLPAQRSF*GSFLSP
Trigger: TGGGGACAGGAAGCTGCCCAAAAAGGATCTCTGGGC...AGGGAGGCAATCAAGTGGTCCAGGAACCAAACTAGAAAATTGTGTGTCTGAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS TCA 90 bp ACTTCCTCTGACTACTTACGATCCAATGAGGTCTGGCGACGGATGTaGTCTAAGAACTTGGTATTGTTGGCAAACATGCCCCCACAGGTG +
Preference number: 5 (lower is better)
Translates to: TSSDYLRSNEVWRRM*SKNLVLLANMPPQV
Trigger: CACCTGTGGGGGCATGTTTGCCAACAATACCAAGTTCTTAGATCACATCCGTCGCCAGACCTCATTGGATCGTAAGTAGTCAGAGGAAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527755.5
CDS-3UTR CAA 90 bp CATTCAGACACACAATTTTCTAGTTTGGTTCCTGGACCACTTGATTGCCTCCCTACCACCGGGTTGTCCTaGCCGACTGCTTCGTATTCA +
Preference number: 5 (lower is better)
Translates to: HSDTQFSSLVPGPLDCLPTTGLS*PTASYS
Trigger: TGAATACGAAGCAGTCGGCAAGGACAACCCGGTGGT...AGGGAGGCAATCAAGTGGTCCAGGAACCAAACTAGAAAATTGTGTGTCTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CAA 90 bp CATTCAGACACACAATTTTCTAGTTTGGTTCCTGGACCACTTGATTGCCTCCCTTGGTTGCCGCAGCAGTaGCTGTGTCAGCTCTACACT +
Preference number: 5 (lower is better)
Translates to: HSDTQFSSLVPGPLDCLPWLPQQ*LCQLYT
Trigger: AGTGTAGAGCTGACACAGCAACTGCTGCGGCAACCA...AGGGAGGCAATCAAGTGGTCCAGGAACCAAACTAGAAAATTGTGTGTCTGAATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CAA 90 bp CACTCACAGCCAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATACTGTCAAGCAGATCTaGAGGGTTATGGTTAAGCCT +
Preference number: 5 (lower is better)
Translates to: HSQPNTWDLHGNGIRSENTVKQI*RVMVKP
Trigger: AGGCTTAACCATAACCCTCAAGATCTGCTTGACAGT...ATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTGGCTGTGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CAA 90 bp CATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTCACCAAGGGGAGGAGGACATGACATTTGTACCTaGGCTCAGAGTCTCCTTCAT +
Preference number: 5 (lower is better)
Translates to: HGNGIRSENSEVSPRGGGHDICT*AQSLLH
Trigger: ATGAAGGAGACTCTGAGCCAAGGTACAAATGTCATG...TCCTCCTCCCCTTGGTGAAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS GCA 90 bp CGGATGAGGTCAGCAGAACTGTCCAGAGAACAAAAGCCACATTCCTaGCACAAGCAGGAGAATTCTTCCTCTGTAGAAAGGGGTTTAAAA +
Preference number: 5 (lower is better)
Translates to: RMRSAELSREQKPHS*HKQENSSSVERGLK
Trigger: TTTTAAACCCCTTTCTACAGAGGAAGAATTCTCCTGCTTGTGGCAGGAATGTGGCTTTTGTTCTCTGGACAGTTCTGCTGACCTCATCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531022.5
CDS-3UTR CAA 90 bp TTTAACAAGAACACACACATCCAGGATCCCCTCAAAGAATCCAGAGTCCTCAGGCTCCTCAGCTATTCCTaGAAGCTTTTCCATGATGCC +
Preference number: 5 (lower is better)
Translates to: FNKNTHIQDPLKESRVLRLLSYS*KLFHDA
Trigger: GGCATCATGGAAAAGCTTCAAGGAATAGCTGAGGAG...CCTGAGGACTCTGGATTCTTTGAGGGGATCCTGGATGTGTGTGTTCTTGTTAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CAA 90 bp CAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTTTGGTTATCAATGCCTaGGCTGGTGACAAAGAAAGG +
Preference number: 5 (lower is better)
Translates to: QTPGTSMEMAYALRIAKFLVINA*AGDKER
Trigger: CCTTTCTTTGTCACCAGCCAAGGCATTGATAACCAA...AAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CAA 90 bp CAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTGAGGAAAATGGCTACTaGGTTATCAATGCCTTGGCT +
Preference number: 5 (lower is better)
Translates to: QTPGTSMEMAYALRIAKFEENGY*VINALA
Trigger: AGCCAAGGCATTGATAACCAAGTAGCCATTTTCCTC...AAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS TCA 90 bp GAAACCCAACCAGAAAAACAGAGACTGACTGACTGTGTTGGAGGGTaGAAGTGTCAAAGGATTTATGAGAAGGCCTTGGAGCTAAGGATC +
Preference number: 5 (lower is better)
Translates to: ETQPEKQRLTDCVGG*KCQRIYEKALELRI
Trigger: GATCCTTAGCTCCAAGGCCTTCTCATAAATCCTTTGACACTTTCACCCTCCAACACAGTCAGTCAGTCTCTGTTTTTCTGGTTGGGTTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532860.1
CDS GCA 90 bp TTGAATCATAAGTCCCCTGCCAGACTTTCACAGTGCCATACAATCTaGCTTTACCTAACCTATCCAACGGTTTACTCCACCACTCTGCTA +
Preference number: 5 (lower is better)
Translates to: LNHKSPARLSQCHTI*LYLTYPTVYSTTLL
Trigger: TAGCAGAGTGGTGGAGTAAACCGTTGGATAGGTTAGGTAAAGGCAGATTGTATGGCACTGTGAAAGTCTGGCAGGGGACTTATGATTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532312.2
CDS CCA 90 bp TCAGAACCCTTAGACTCTAGCTCTAGTTCCAGCTGCAGGACTTTTTaGCACCATTTATTGGGTTTGGCACCATGCCTTACAAGATTCAAA +
Preference number: 5 (lower is better)
Translates to: SEPLDSSSSSSCRTF*HHLLGLAPCLTRFK
Trigger: TTTGAATCTTGTAAGGCATGGTGCCAAACCCAATAAATGGTGCCAAAAAGTCCTGCAGCTGGAACTAGAGCTAGAGTCTAAGGGTTCTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532860.1
CDS-3UTR CAA 90 bp TTGTTAATAAACACGCTCAATGCCTCCAATCCTGTCCCTGAGGATAATCATGAAATAGTAGACGATCTCTaGCTGGCCTTGGGCATTGGT +
Preference number: 5 (lower is better)
Translates to: LLINTLNASNPVPEDNHEIVDDL*LALGIG
Trigger: ACCAATGCCCAAGGCCAGCAAGAGATCGTCTACTAT...TTCATGATTATCCTCAGGGACAGGATTGGAGGCATTGAGCGTGTTTATTAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS-3UTR CAA 90 bp CAAACACCTGGGACCTCCATGGAAATGGCATACGCTCTGAGAATAGCGAAGTTTACACAATTTTCTAGTTaGGTTCCTGGACCACTTGAT +
Preference number: 5 (lower is better)
Translates to: QTPGTSMEMAYALRIAKFTQFSS*VPGPLD
Trigger: ATCAAGTGGTCCAGGAACCAAACTAGAAAATTGTGT...AAACTTCGCTATTCTCAGAGCGTATGCCATTTCCATGGAGGTCCCAGGTGTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000350777.7
CDS CCA 72 bp TCCCGCAGGCTTCCCGGAATCCTTCACGCTAAGGCGTaGCGGCGACCGAGTCTCAGCCGCAGCGAAGCCCCT +
Preference number: 6 (lower is better)
Translates to: SRRLPGILHAKA*RRPSLSRSEAP
Trigger: AGGGGCTTCGCTGCGGCTGAGACTCGGTCGCCGCCACGCCTTAGCGTGAAGGATTCCGGGAAGCCTGCGGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529988.5
CDS CAA 90 bp CAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTaGCTGTGTCAGCTCTACACTCTCGTAGCGAACCAGCTGCAGCCG +
Preference number: 6 (lower is better)
Translates to: QRRSQARSLLWLPQQ*LCQLYTLVANQLQP
Trigger: CGGCTGCAGCTGGTTCGCTACGAGAGTGTAGAGCTGACACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350777.7
ENST00000527410.3
ENST00000527755.5
ENST00000529808.1
CDS CAA 72 bp CGGGGATGCCCTGAGGGCCACTTGAACTGGTGCTTCTaGCGAAGGTGCACGGTGAGGTTGTTGCCCCGTGTG +
Preference number: 6 (lower is better)
Translates to: RGCPEGHLNWCF*RRCTVRLLPRV
Trigger: CACACGGGGCAACAACCTCACCGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGGCATCCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000350777.7
ENST00000527410.3
ENST00000527755.5
ENST00000529808.1
ENST00000532860.1
CDS CAA 72 bp TGGCCGAGGCGAAAACGGGGATGCCCTGAGGGCCACTaGAACTGGTGCTTCTTGCGAAGGTGCACGGTGAGG +
Preference number: 6 (lower is better)
Translates to: WPRRKRGCPEGH*NWCFLRRCTVR
Trigger: CCTCACCGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGGCATCCCCGTTTTCGCCTCGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS CCA 72 bp CCACAGGTGGGGCAGGCTACCACTTTCTCCTGGGTATaGCTGCGGAGGTGCTCTCGAAGTTTACTGCGGTCC +
Preference number: 6 (lower is better)
Translates to: PQVGQATTFSWV*LRRCSRSLLRS
Trigger: GGACCGCAGTAAACTTCGAGAGCACCTCCGCAGCCATACCCAGGAGAAAGTGGTAGCCTGCCCCACCTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000527755.5
ENST00000529610.1
ENST00000529808.1
ENST00000531022.5
CDS CAA 72 bp GCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTaGTGGTTGCCGCAGCAGTTGCTGTGTCAGCTCTAC +
Preference number: 6 (lower is better)
Translates to: ALVQRRSQARSL*WLPQQLLCQLY
Trigger: GTAGAGCTGACACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350777.7
ENST00000527410.3
ENST00000527755.5
ENST00000529808.1
CDS CAA 90 bp GCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTaGCCGCAGCAGTTGCTGTGTCAGCTCTACACTCTCGTAGCGAAC +
Preference number: 6 (lower is better)
Translates to: AALVQRRSQARSLLW*PQQLLCQLYTLVAN
Trigger: GTTCGCTACGAGAGTGTAGAGCTGACACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350777.7
ENST00000527410.3
ENST00000527755.5
ENST00000529808.1
CDS CAA 90 bp CTGCAGGCTGCTCTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTaGTGGTTGCCGCAGCAGTTGCTGTGTCAGCTCTACACTCTCGTA +
Preference number: 6 (lower is better)
Translates to: LQAALVQRRSQARSL*WLPQQLLCQLYTLV
Trigger: TACGAGAGTGTAGAGCTGACACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAGAGCAGCCTGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350777.7
ENST00000527410.3
ENST00000527755.5
ENST00000529808.1
CDS TCA 72 bp CCCACAGACACAGGAAGTGGTCAGGGATATCAGGGATaGCGTTCCGGCTCTGGAAGTCCAGGATGCAGGGGC +
Preference number: 6 (lower is better)
Translates to: PTDTGSGQGYQG*RSGSGSPGCRG
Trigger: GCCCCTGCATCCTGGACTTCCAGAGCCGGAACGTCATCCCTGATATCCCTGACCACTTCCTGTGTCTGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000529354.1
ENST00000531022.5
ENST00000531360.5
ENST00000532312.2
CDS GCA 72 bp TTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTGGTTaGCGCAGCAGTTGCTGTGTCAGCTCTACACTCTCG +
Preference number: 6 (lower is better)
Translates to: FSDVPRPDPSCG*RSSCCVSSTLS
Trigger: CGAGAGTGTAGAGCTGACACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350777.7
ENST00000527410.3
ENST00000527755.5
ENST00000529808.1
CDS GCA 72 bp AGACCCCCAGCTTCCTTCCACCCCAATTACTGGCACTaGCTGCTGACCTCACAGTGCTCCCACAGACACAGG +
Preference number: 6 (lower is better)
Translates to: RPPASFHPNYWH*LLTSQCSHRHR
Trigger: CCTGTGTCTGTGGGAGCACTGTGAGGTCAGCAGGCAGTGCCAGTAATTGGGGTGGAAGGAAGCTGGGGGTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000529354.1
CDS CCA 72 bp CTCGTTCAGCGACGTTCCCAGGCCCGATCCCTCTTGTaGTTGCCGCAGCAGTTGCTGTGTCAGCTCTACACT +
Preference number: 6 (lower is better)
Translates to: LVQRRSQARSLL*LPQQLLCQLYT
Trigger: AGTGTAGAGCTGACACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGAACGTCGCTGAACGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350777.7
ENST00000527410.3
ENST00000527755.5
ENST00000529808.1
CDS CAA 72 bp TCCCAGGCCCGATCCCTCTTGTGGTTGCCGCAGCAGTaGCTGTGTCAGCTCTACACTCTCGTAGCGAACCAG +
Preference number: 6 (lower is better)
Translates to: SQARSLLWLPQQ*LCQLYTLVANQ
Trigger: CTGGTTCGCTACGAGAGTGTAGAGCTGACACAGCAACTGCTGCGGCAACCACAAGAGGGATCGGGCCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000350777.7
ENST00000527410.3
ENST00000527755.5
ENST00000529808.1
CDS CAA 90 bp ATACAGAAATGGCCGAGGCGAAAACGGGGATGCCCTGAGGGCCACTaGAACTGGTGCTTCTTGCGAAGGTGCACGGTGAGGTTGTTGCCC +
Preference number: 6 (lower is better)
Translates to: IQKWPRRKRGCPEGH*NWCFLRRCTVRLLP
Trigger: GGGCAACAACCTCACCGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGGCATCCCCGTTTTCGCCTCGGCCATTTCTGTAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS CAA 90 bp TCCTGGGTATGGCTGCGGAGGTGCTCTCGAAGTTTACTGCGGTCCTaGAAGGTGCAGGTACAGCCTGGGAAGGAAGCCCTATCAGTCTCC +
Preference number: 6 (lower is better)
Translates to: SWVWLRRCSRSLLRS*KVQVQPGKEALSVS
Trigger: GGAGACTGATAGGGCTTCCTTCCCAGGCTGTACCTGCACCTTCAAGGACCGCAGTAAACTTCGAGAGCACCTCCGCAGCCATACCCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527755.5
CDS TCA 72 bp GGCTGCGGAGGTGCTCTCGAAGTTTACTGCGGTCCTTaGAGGTGCAGGTACAGCCTTTCCAGCCACACAGCA +
Preference number: 6 (lower is better)
Translates to: GCGGALEVYCGP*RCRYSLSSHTA
Trigger: TGCTGTGTGGCTGGAAAGGCTGTACCTGCACCTTCAAGGACCGCAGTAAACTTCGAGAGCACCTCCGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000529610.1
ENST00000529808.1
ENST00000531022.5
CDS TCA 72 bp GCTGGCCTTGGGCATTGGTCTGATTCACCACGTGGATaGCAGAACTGGGGTTGTCCTGAGAGGCTGAGAGGG +
Preference number: 6 (lower is better)
Translates to: AGLGHWSDSPRG*QNWGCPERLRG
Trigger: CCCTCTCAGCCTCTCAGGACAACCCCAGTTCTGTCATCCACGTGGTGAATCAGACCAATGCCCAAGGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350777.7
ENST00000527755.5
CDS TCA 72 bp GGCTGCGGAGGTGCTCTCGAAGTTTACTGCGGTCCTTaGAGGTGCAGGTACAGCCTGGGAAGGAAGCCCTAT +
Preference number: 6 (lower is better)
Translates to: GCGGALEVYCGP*RCRYSLGRKPY
Trigger: ATAGGGCTTCCTTCCCAGGCTGTACCTGCACCTTCAAGGACCGCAGTAAACTTCGAGAGCACCTCCGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527755.5
CDS CCA 72 bp AGGCGAAAACGGGGATGCCCTGAGGGCCACTTGAACTaGTGCTTCTTGCGAAGGTGCACGGTGAGGTTGTTG +
Preference number: 6 (lower is better)
Translates to: RRKRGCPEGHLN*CFLRRCTVRLL
Trigger: CAACAACCTCACCGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGGCATCCCCGTTTTCGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000527410.3
CDS CAA 72 bp TGGCTGCGGAGGTGCTCTCGAAGTTTACTGCGGTCCTaGAAGGTGCAGGTACAGCCTTTCCAGCCACACAGC +
Preference number: 6 (lower is better)
Translates to: WLRRCSRSLLRS*KVQVQPFQPHS
Trigger: GCTGTGTGGCTGGAAAGGCTGTACCTGCACCTTCAAGGACCGCAGTAAACTTCGAGAGCACCTCCGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000529610.1
ENST00000529808.1
ENST00000531022.5
CDS CAA 72 bp TCCTTGTACCGAAAACGGGGATGCCCTGAGGGCCACTaGAACTGGTGCTTCTTGCGAAGGTGCACGGTGAGG +
Preference number: 6 (lower is better)
Translates to: SLYRKRGCPEGH*NWCFLRRCTVR
Trigger: CCTCACCGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGGCATCCCCGTTTTCGGTACAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350777.7
ENST00000527755.5
ENST00000529808.1
CDS CAA 72 bp TGGCTGCGGAGGTGCTCTCGAAGTTTACTGCGGTCCTaGAAGGTGCAGGTACAGCCTGGGAAGGAAGCCCTA +
Preference number: 6 (lower is better)
Translates to: WLRRCSRSLLRS*KVQVQPGKEAL
Trigger: TAGGGCTTCCTTCCCAGGCTGTACCTGCACCTTCAAGGACCGCAGTAAACTTCGAGAGCACCTCCGCAGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527755.5
CDS CAA 72 bp GAGACATACCGAAAACGGGGATGCCCTGAGGGCCACTaGAACTGGTGCTTCTTGCGAAGGTGCACGGTGAGG +
Preference number: 6 (lower is better)
Translates to: ETYRKRGCPEGH*NWCFLRRCTVR
Trigger: CCTCACCGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGGCATCCCCGTTTTCGGTATGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532860.1
CDS CAA 90 bp GGGAGGCTCCCCTGGGGCTTCAGACAGCACATAGTAGACGATCTCTaGCTGGCCTTGGGCATTGGTCTGATTCACCACGTGGATGACAGA +
Preference number: 6 (lower is better)
Translates to: GRLPWGFRQHIVDDL*LALGIGLIHHVDDR
Trigger: TCTGTCATCCACGTGGTGAATCAGACCAATGCCCAAGGCCAGCAAGAGATCGTCTACTATGTGCTGTCTGAAGCCCCAGGGGAGCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000350777.7
ENST00000527755.5
CDS GCA 72 bp AGCCTTTCCAGCCACACAGCACCACCGGGTTGTCCTTaGCGACTGCTTCGTATTCACAGCACAGACTGTGTG +
Preference number: 6 (lower is better)
Translates to: SLSSHTAPPGCP*RLLRIHSTDCV
Trigger: CACACAGTCTGTGCTGTGAATACGAAGCAGTCGGCAAGGACAACCCGGTGGTGCTGTGTGGCTGGAAAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000529610.1
ENST00000529808.1
ENST00000531022.5
CDS GCA 72 bp CAGGCTACCACTTTCTCCTGGGTATGGCTGCGGAGGTaGTCTCGAAGTTTACTGCGGTCCTTGAAGGTGCAG +
Preference number: 6 (lower is better)
Translates to: QATTFSWVWLRR*SRSLLRSLKVQ
Trigger: CTGCACCTTCAAGGACCGCAGTAAACTTCGAGAGCACCTCCGCAGCCATACCCAGGAGAAAGTGGTAGCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000527755.5
ENST00000529610.1
ENST00000529808.1
ENST00000531022.5
CDS GCA 72 bp CCTGAGGGCCACTTGAACTGGTGCTTCTTGCGAAGGTaGACGGTGAGGTTGTTGCCCCGTGTGAAGCATTTG +
Preference number: 6 (lower is better)
Translates to: PEGHLNWCFLRR*TVRLLPRVKHL
Trigger: CAAATGCTTCACACGGGGCAACAACCTCACCGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000350777.7
ENST00000527410.3
ENST00000527755.5
ENST00000529808.1
ENST00000532860.1
CDS CCA 72 bp TACCGAAAACGGGGATGCCCTGAGGGCCACTTGAACTaGTGCTTCTTGCGAAGGTGCACGGTGAGGTTGTTG +
Preference number: 6 (lower is better)
Translates to: YRKRGCPEGHLN*CFLRRCTVRLL
Trigger: CAACAACCTCACCGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGGCATCCCCGTTTTCGGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000350777.7
ENST00000527755.5
ENST00000529808.1
ENST00000532860.1
CDS CCA 72 bp GGTAGAATTTGGACAGAAGGAAGGAGACCGTCCCGTTaGGCAAAACCTCTCCACTCGCAGTCCCGCAGGCTT +
Preference number: 6 (lower is better)
Translates to: GRIWTEGRRPSR*AKPLHSQSRRL
Trigger: AAGCCTGCGGGACTGCGAGTGGAGAGGTTTTGCCCAACGGGACGGTCTCCTTCCTTCTGTCCAAATTCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529988.5
CDS CAA 72 bp CAGCCTTTCCAGCCACACAGCACCACCGGGTTGTCCTaGCCGACTGCTTCGTATTCACAGCACAGACTGTGT +
Preference number: 6 (lower is better)
Translates to: QPFQPHSTTGLS*PTASYSQHRLC
Trigger: ACACAGTCTGTGCTGTGAATACGAAGCAGTCGGCAAGGACAACCCGGTGGTGCTGTGTGGCTGGAAAGGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000529610.1
ENST00000529808.1
ENST00000531022.5
CDS CAA 72 bp CAGGTACAGCCTTTCCAGCCACACAGCACCACCGGGTaGTCCTTGCCGACTGCTTCGTATTCACAGCACAGA +
Preference number: 6 (lower is better)
Translates to: QVQPFQPHSTTG*SLPTASYSQHR
Trigger: TCTGTGCTGTGAATACGAAGCAGTCGGCAAGGACAACCCGGTGGTGCTGTGTGGCTGGAAAGGCTGTACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000529610.1
ENST00000529808.1
ENST00000531022.5
CDS CAA 90 bp TTGAAGGTGCAGGTACAGCCTTTCCAGCCACACAGCACCACCGGGTaGTCCTTGCCGACTGCTTCGTATTCACAGCACAGACTGTGTGCT +
Preference number: 6 (lower is better)
Translates to: LKVQVQPFQPHSTTG*SLPTASYSQHRLCA
Trigger: AGCACACAGTCTGTGCTGTGAATACGAAGCAGTCGGCAAGGACAACCCGGTGGTGCTGTGTGGCTGGAAAGGCTGTACCTGCACCTTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000529610.1
ENST00000529808.1
ENST00000531022.5
CDS CAA 90 bp TCTTCATGTTCCTTGTACCGAAAACGGGGATGCCCTGAGGGCCACTaGAACTGGTGCTTCTTGCGAAGGTGCACGGTGAGGTTGTTGCCC +
Preference number: 6 (lower is better)
Translates to: SSCSLYRKRGCPEGH*NWCFLRRCTVRLLP
Trigger: GGGCAACAACCTCACCGTGCACCTTCGCAAGAAGCACCAGTTCAAGTGGCCCTCAGGGCATCCCCGTTTTCGGTACAAGGAACATGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000350777.7
ENST00000527755.5
ENST00000529808.1
CDS TCA 72 bp TCACAACAGTCACATTTAAAGGGCCGGTCCTCACTGTaGCGAAAGCGCATGTGGTTGCGGAGGGAGGAAGGC +
Preference number: 6 (lower is better)
Translates to: SQQSHLKGRSSL*RKRMWLRREEG
Trigger: GCCTTCCTCCCTCCGCAACCACATGCGCTTTCGTCACAGTGAGGACCGGCCCTTTAAATGTGACTGTTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350777.7
ENST00000527410.3
ENST00000527755.5
ENST00000529808.1
ENST00000531022.5
CDS GCA 72 bp CACCCCAATTACTGGCACTGCCTGCTGACCTCACAGTaGTCCCACAGACACAGGAAGTGGTCAGGGATATCA +
Preference number: 6 (lower is better)
Translates to: HPNYWHCLLTSQ*SHRHRKWSGIS
Trigger: TGATATCCCTGACCACTTCCTGTGTCTGTGGGAGCACTGTGAGGTCAGCAGGCAGTGCCAGTAATTGGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000529354.1
CDS GCA 72 bp TACCTTTCCAGCCACACAGCACCACCGGGTTGTCCTTaGCGACTGCTTCGTATTCACAGCACAGACTGTGTG +
Preference number: 6 (lower is better)
Translates to: YLSSHTAPPGCP*RLLRIHSTDCV
Trigger: CACACAGTCTGTGCTGTGAATACGAAGCAGTCGGCAAGGACAACCCGGTGGTGCTGTGTGGCTGGAAAGGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527755.5
CDS CCA 72 bp AGAACTTGGTATTGTTGGCAAACATGCCCCCACAGGTaGGGCAGGCTACCACTTTCTCCTGGGTATGGCTGC +
Preference number: 6 (lower is better)
Translates to: RTWYCWQTCPHR*GRLPLSPGYGC
Trigger: GCAGCCATACCCAGGAGAAAGTGGTAGCCTGCCCCACCTGTGGGGGCATGTTTGCCAACAATACCAAGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000527755.5
ENST00000529808.1
ENST00000531022.5
CDS CAA 72 bp CTACCTTTCCAGCCACACAGCACCACCGGGTTGTCCTaGCCGACTGCTTCGTATTCACAGCACAGACTGTGT +
Preference number: 6 (lower is better)
Translates to: LPFQPHSTTGLS*PTASYSQHRLC
Trigger: ACACAGTCTGTGCTGTGAATACGAAGCAGTCGGCAAGGACAACCCGGTGGTGCTGTGTGGCTGGAAAGGTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000527755.5
CDS GCA 72 bp CAAACTTCAGGACCTGGGGAAGAAATGGTCTGGCTCTaGGGCCTTCAAACCATCTGGATCTCTGGCTCCTCA +
Preference number: 6 (lower is better)
Translates to: QTSGPGEEMVWL*GLQTIWISGSS
Trigger: TGAGGAGCCAGAGATCCAGATGGTTTGAAGGCCGCAGAGCCAGACCATTTCTTCCCCAGGTCCTGAAGTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350777.7
ENST00000527755.5
CDS GCA 72 bp CACTCTAGCCTGGGCTTCAGATCAAGAGCCTCACAGTaGTCCCACAGACACAGGAAGTGGTCAGGGATATCA +
Preference number: 6 (lower is better)
Translates to: HSSLGFRSRASQ*SHRHRKWSGIS
Trigger: TGATATCCCTGACCACTTCCTGTGTCTGTGGGAGCACTGTGAGGCTCTTGATCTGAAGCCCAGGCTAGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000531360.5
ENST00000532312.2
CDS CCA 72 bp CCAATGAGGTCTGGCGACGGATGTGATCTAAGAACTTaGTATTGTTGGCAAACATGCCCCCACAGGTGGGGC +
Preference number: 6 (lower is better)
Translates to: PMRSGDGCDLRT*YCWQTCPHRWG
Trigger: GCCCCACCTGTGGGGGCATGTTTGCCAACAATACCAAGTTCTTAGATCACATCCGTCGCCAGACCTCATTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000527755.5
ENST00000529808.1
ENST00000531022.5
CDS CCA 72 bp CTTGCCTGGCTCAAACTTCAGGACCTGGGGAAGAAATaGTCTGGCTCTGCGGCCTTCAAACCATCTGGATCT +
Preference number: 6 (lower is better)
Translates to: LAWLKLQDLGKK*SGSAAFKPSGS
Trigger: AGATCCAGATGGTTTGAAGGCCGCAGAGCCAGACCATTTCTTCCCCAGGTCCTGAAGTTTGAGCCAGGCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000350777.7
ENST00000527755.5
CDS CCA 72 bp GTGTGCAAGGCCTATGCCAGAAACAGACAGCAGAAATaGCCGGCACGCAAGTCCTCTGACTTGAGTTTCTGC +
Preference number: 6 (lower is better)
Translates to: VCKAYARNRQQK*PARKSSDLSFC
Trigger: GCAGAAACTCAAGTCAGAGGACTTGCGTGCCGGCCATTTCTGCTGTCTGTTTCTGGCATAGGCCTTGCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531022.5
CDS TCA 72 bp GCTTGGTGTGGTAGCAGTGGAAGTAGACATGGCGGATaGGGTCAGCAGAACTGTCCAGAGAACAAAAGCCAC +
Preference number: 6 (lower is better)
Translates to: AWCGSSGSRHGG*GQQNCPENKSH
Trigger: GTGGCTTTTGTTCTCTGGACAGTTCTGCTGACCTCATCCGCCATGTCTACTTCCACTGCTACCACACCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000529354.1
ENST00000529988.5
ENST00000531022.5
ENST00000531360.5
ENST00000532312.2
CDS CCA 72 bp CATGGTTGCGCATGTGGTCCCGCAATAGCCGCTCTGTaGCAAATCTCTTGGAACAGTGAGAACACTGGAAGT +
Preference number: 6 (lower is better)
Translates to: HGCACGPAIAAL*QISWNSENTGS
Trigger: ACTTCCAGTGTTCTCACTGTTCCAAGAGATTTGCCACAGAGCGGCTATTGCGGGACCACATGCGCAACCATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000350777.7
ENST00000527410.3
ENST00000527755.5
ENST00000529808.1
ENST00000531022.5
CDS CCA 72 bp AAGTTTACTGCGGTCCTTGAAGGTGCAGGTACAGCCTaGGAAGGAAGCCCTATCAGTCTCCTGCCACAAAAC +
Preference number: 6 (lower is better)
Translates to: KFTAVLEGAGTA*EGSPISLLPQN
Trigger: GTTTTGTGGCAGGAGACTGATAGGGCTTCCTTCCCAGGCTGTACCTGCACCTTCAAGGACCGCAGTAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000527755.5
CDS TCA 72 bp GTGCTGAGTGACATGCTCAAAGAACTTTTCCATGGTTaGGCACACAAAGGAGCAGGACCCCCACTCACACTG +
Preference number: 6 (lower is better)
Translates to: VLSDMLKELFHG*AHKGAGPPLTL
Trigger: CAGTGTGAGTGGGGGTCCTGCTCCTTTGTGTGCTCAACCATGGAAAAGTTCTTTGAGCATGTCACTCAGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000350777.7
ENST00000527206.1
ENST00000527410.3
ENST00000529354.1
ENST00000529988.5
ENST00000530678.1
ENST00000532312.2
CDS TCA 72 bp CAAACCATCTGGATCTCTGGCTCCTCAGCTATTCCTTaGAGCTTTTCCATGATGCCCCCTGAAGGTGGCTCA +
Preference number: 6 (lower is better)
Translates to: QTIWISGSSAIP*SFSMMPPEGGS
Trigger: TGAGCCACCTTCAGGGGGCATCATGGAAAAGCTTCAAGGAATAGCTGAGGAGCCAGAGATCCAGATGGTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000350777.7
ENST00000527755.5
CDS GCA 72 bp GGATGTGATCTAAGAACTTGGTATTGTTGGCAAACATaGCCCCACAGGTGGGGCAGGCTACCACTTTCTCCT +
Preference number: 6 (lower is better)
Translates to: GCDLRTWYCWQT*PHRWGRLPLSP
Trigger: AGGAGAAAGTGGTAGCCTGCCCCACCTGTGGGGGCATGTTTGCCAACAATACCAAGTTCTTAGATCACATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000350777.7
ENST00000527354.5
ENST00000527410.3
ENST00000527755.5
ENST00000529808.1
ENST00000531022.5
CDS GCA 72 bp GTGAAGAAGTGTGGTCTAGGCAGAGGTGAGAGTGTGTaGAAGGCCTATGCCAGAAACAGACAGCAGAAATGG +
Preference number: 6 (lower is better)
Translates to: VKKCGLGRGESV*KAYARNRQQKW
Trigger: CCATTTCTGCTGTCTGTTTCTGGCATAGGCCTTGCACACACTCTCACCTCTGCCTAGACCACACTTCTTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531022.5
CDS CCA 72 bp CCTCCTCAGAGAAGAATCCAGTCATCCTTAACACTCTaGGGTGCATATAGGGTTGCTGAGCTGCTCACAGAC +
Preference number: 6 (lower is better)
Translates to: PPQRRIQSSLTL*GAYRVAELLTD
Trigger: GTCTGTGAGCAGCTCAGCAACCCTATATGCACCCCAGAGTGTTAAGGATGACTGGATTCTTCTCTGAGGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530678.1
ENST00000532312.2
CDS CAA 72 bp GGTAGAGGGACTCACCCCTATGTGCCCGAAGAATTCTaGGCTCTCTCCCAAATTAACTTGATGGGGATGGGA +
Preference number: 6 (lower is better)
Translates to: GRGTHPYVPEEF*ALSQINLMGMG
Trigger: TCCCATCCCCATCAAGTTAATTTGGGAGAGAGCCAAGAATTCTTCGGGCACATAGGGGTGAGTCCCTCTACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529354.1
ENST00000529610.1
ENST00000531360.5
CDS TCA 72 bp AAACAGACAGCAGAAATGGCCGGCACGCAAGTCCTCTaGCTTGAGTTTCTGCAGTTCCTGATGAAGATGCTG +
Preference number: 6 (lower is better)
Translates to: KQTAEMAGTQVL*LEFLQFLMKML
Trigger: CAGCATCTTCATCAGGAACTGCAGAAACTCAAGTCAGAGGACTTGCGTGCCGGCCATTTCTGCTGTCTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000531022.5
CDS CCA 72 bp CACGGCCACACACTAGTGGTAATGGTAGGGTCATGTTaGGCTGACTCTAGTCCATATACGGTTCTACTCCAT +
Preference number: 6 (lower is better)
Translates to: HGHTLVVMVGSC*ADSSPYTVLLH
Trigger: ATGGAGTAGAACCGTATATGGACTAGAGTCAGCCCAACATGACCCTACCATTACCACTAGTGTGTGGCCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532312.2
CDS CAA 72 bp TTCAGACAGCACATAGTAGACGATCTCTTGCTGGCCTaGGGCATTGGTCTGATTCACCACGTGGATGACAGA +
Preference number: 6 (lower is better)
Translates to: FRQHIVDDLLLA*GIGLIHHVDDR
Trigger: TCTGTCATCCACGTGGTGAATCAGACCAATGCCCAAGGCCAGCAAGAGATCGTCTACTATGTGCTGTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000350777.7
ENST00000527755.5
CDS TCA 72 bp CTGCCTAGAATCAGCACGTGTTGTTCCAGTGACCCATaGGAAACCCTGCCCTTTTACAGTAAGGATGGAGTA +
Preference number: 6 (lower is better)
Translates to: LPRISTCCSSDP*ETLPFYSKDGV
Trigger: TACTCCATCCTTACTGTAAAAGGGCAGGGTTTCTCATGGGTCACTGGAACAACACGTGCTGATTCTAGGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532312.2
CDS CCA 72 bp AACAATGCCTACGAATCTGAATCAGCAAAGAGACTATaGGAGGTGCCTGAGCCCAAAAAGAAGAGGCAGCCA +
Preference number: 6 (lower is better)
Translates to: NNAYESESAKRL*EVPEPKKKRQP
Trigger: TGGCTGCCTCTTCTTTTTGGGCTCAGGCACCTCCCATAGTCTCTTTGCTGATTCAGATTCGTAGGCATTGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000527755.5
CDS CAA 90 bp TTCCTCTGTGAGGCAGAACAATGCTCAGGTTCAAACAGATGGCTTTaGAGAAGGATCAGGGTTCAAATCCTGGCTCCACTGTCTACCATC +
Preference number: 6 (lower is better)
Translates to: FLCEAEQCSGSNRWL*RRIRVQILAPLSTI
Trigger: GATGGTAGACAGTGGAGCCAGGATTTGAACCCTGATCCTTCTCAAAAGCCATCTGTTTGAACCTGAGCATTGTTCTGCCTCACAGAGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532312.2
CDS TCA 72 bp GACTACTTACGATCCAATGAGGTCTGGCGACGGATGTaGTCTAAGAACTTGGTATTGTTGGCAAACATGCCC +
Preference number: 6 (lower is better)
Translates to: DYLRSNEVWRRM*SKNLVLLANMP
Trigger: GGGCATGTTTGCCAACAATACCAAGTTCTTAGATCACATCCGTCGCCAGACCTCATTGGATCGTAAGTAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000527354.5
ENST00000527755.5
CDS GCA 72 bp GGATCAGAACCCTTAGACTCTAGCTCTAGTTCCAGCTaGAGGACTTTTTGGCACCATTTATTGGGTTTGGCA +
Preference number: 6 (lower is better)
Translates to: GSEPLDSSSSSS*RTFWHHLLGLA
Trigger: TGCCAAACCCAATAAATGGTGCCAAAAAGTCCTGCAGCTGGAACTAGAGCTAGAGTCTAAGGGTTCTGATCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532860.1
CDS CCA 72 bp CTCTGTGAGGCAGAACAATGCTCAGGTTCAAACAGATaGCTTTTGAGAAGGATCAGGGTTCAAATCCTGGCT +
Preference number: 6 (lower is better)
Translates to: LCEAEQCSGSNR*LLRRIRVQILA
Trigger: AGCCAGGATTTGAACCCTGATCCTTCTCAAAAGCCATCTGTTTGAACCTGAGCATTGTTCTGCCTCACAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532312.2
CDS CAA 72 bp GTGCCCGAAGAATTCTTGGCTCTCTCCCAAATTAACTaGATGGGGATGGGAAATTTTGAGGAAAGGCACTGC +
Preference number: 6 (lower is better)
Translates to: VPEEFLALSQIN*MGMGNFEERHC
Trigger: GCAGTGCCTTTCCTCAAAATTTCCCATCCCCATCAAGTTAATTTGGGAGAGAGCCAAGAATTCTTCGGGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000529354.1
ENST00000529610.1
ENST00000531360.5
CDS TCA 72 bp TTCAGAGCAACCCACCAAGAAGGAATTATTCCTCTGTaGGGCAGAACAATGCTCAGGTTCAAACAGATGGCT +
Preference number: 6 (lower is better)
Translates to: FRATHQEGIIPL*GRTMLRFKQMA
Trigger: AGCCATCTGTTTGAACCTGAGCATTGTTCTGCCTCACAGAGGAATAATTCCTTCTTGGTGGGTTGCTCTGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532312.2
CDS CCA 72 bp TTAGACTCTAGCTCTAGTTCCAGCTGCAGGACTTTTTaGCACCATTTATTGGGTTTGGCACCATGCCTTACA +
Preference number: 6 (lower is better)
Translates to: LDSSSSSSCRTF*HHLLGLAPCLT
Trigger: TGTAAGGCATGGTGCCAAACCCAATAAATGGTGCCAAAAAGTCCTGCAGCTGGAACTAGAGCTAGAGTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532860.1
CDS GCA 72 bp TTATTGAATCATAAGTCCCCTGCCAGACTTTCACAGTaGCATACAATCTGCCTTTACCTAACCTATCCAACG +
Preference number: 6 (lower is better)
Translates to: LLNHKSPARLSQ*HTICLYLTYPT
Trigger: CGTTGGATAGGTTAGGTAAAGGCAGATTGTATGGCACTGTGAAAGTCTGGCAGGGGACTTATGATTCAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532312.2
CDS CAA 72 bp CATAAAAAGCCGTATCTGTGTAGTTTATACTGCACCTaGGGTGTCTATACACTGCTAGGCATGCTTAGGCAT +
Preference number: 6 (lower is better)
Translates to: HKKPYLCSLYCT*GVYTLLGMLRH
Trigger: ATGCCTAAGCATGCCTAGCAGTGTATAGACACCCAAGGTGCAGTATAAACTACACAGATACGGCTTTTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532312.2
CDS GCA 72 bp CCAGTGATGAGTGTTACAAAGCGGGGATATACATGGTaGTATAAAAGCATTAAACAGAGGTCATTTGACATG +
Preference number: 6 (lower is better)
Translates to: PVMSVTKRGYTW*YKSIKQRSFDM
Trigger: CATGTCAAATGACCTCTGTTTAATGCTTTTATAGCACCATGTATATCCCCGCTTTGTAACACTCATCACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531022.5
CDS GCA 72 bp TTTGAACATAAAAAGCCGTATCTGTGTAGTTTATACTaGACCTTGGGTGTCTATACACTGCTAGGCATGCTT +
Preference number: 6 (lower is better)
Translates to: FEHKKPYLCSLY*TLGVYTLLGML
Trigger: AAGCATGCCTAGCAGTGTATAGACACCCAAGGTGCAGTATAAACTACACAGATACGGCTTTTTATGTTCAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532312.2
CDS CCA 72 bp CAACCAGTGATGAGTGTTACAAAGCGGGGATATACATaGTGCTATAAAAGCATTAAACAGAGGTCATTTGAC +
Preference number: 6 (lower is better)
Translates to: QPVMSVTKRGYT*CYKSIKQRSFD
Trigger: GTCAAATGACCTCTGTTTAATGCTTTTATAGCACCATGTATATCCCCGCTTTGTAACACTCATCACTGGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000531022.5
CDS CAA 90 bp CCATTTGAACATAAAAAGCCGTATCTGTGTAGTTTATACTGCACCTaGGGTGTCTATACACTGCTAGGCATGCTTAGGCATGTAATAAAT +
Preference number: 6 (lower is better)
Translates to: PFEHKKPYLCSLYCT*GVYTLLGMLRHVIN
Trigger: ATTTATTACATGCCTAAGCATGCCTAGCAGTGTATAGACACCCAAGGTGCAGTATAAACTACACAGATACGGCTTTTTATGTTCAAATGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000532312.2