RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HIF1AN (Homo sapiens)

Ensembl gene IDs: ENSG00000166135

Ensembl transcript IDs: ENST00000299163.7, ENST00000478787.1, ENST00000526476.5, ENST00000533589.6

Found 594 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GGCCTCACTGACCACACGCCCCCAGGCCTCAAGACTTCCCGTTTCTaGGGTTGTGCCCAACAGAAATGCCCTCAAAGTGCTCAGCAAGGC +
Preference number: 1 (lower is better)
Translates to: GLTDHTPPGLKTSRF*GCAQQKCPQSAQQG
Trigger: GCCTTGCTGAGCACTTTGAGGGCATTTCTGTTGGGCACAACCTCAGAAACGGGAAGTCTTGAGGCCTGGGGGCGTGTGGTCAGTGAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp GTGCAGCGTGCAATACTAGCGCTTGGAGTCTCCTGTCCTCATCAATaGAGCGGTGTGGACGGGATAGCAGTCACCTGGCAGGAGGCCTTG +
Preference number: 1 (lower is better)
Translates to: VQRAILALGVSCPHQ*SGVDGIAVTWQEAL
Trigger: CAAGGCCTCCTGCCAGGTGACTGCTATCCCGTCCACACCGCTTCATTGATGAGGACAGGAGACTCCAAGCGCTAGTATTGCACGCTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp GAGGAGCTGGCTTTAAGACGCAAGCCTATGTGTTTGCCCGTGCCCTaGGGTGGATCACAGGTAGTGAATGAGCTGCCTGGGCTTGACCCC +
Preference number: 1 (lower is better)
Translates to: EELALRRKPMCLPVP*GGSQVVNELPGLDP
Trigger: GGGGTCAAGCCCAGGCAGCTCATTCACTACCTGTGATCCACCTCAGGGCACGGGCAAACACATAGGCTTGCGTCTTAAAGCCAGCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 90 bp GTGCCAACTGCCCTGCCTCGCTCCAAACACCTGACTCCTGGGCCATaGCAAGAGTCCAGTCCATTAAGTGCAGCGTGCAATACTAGCGCT +
Preference number: 1 (lower is better)
Translates to: VPTALPRSKHLTPGP*QESSPLSAACNTSA
Trigger: AGCGCTAGTATTGCACGCTGCACTTAATGGACTGGACTCTTGCCATGGCCCAGGAGTCAGGTGTTTGGAGCGAGGCAGGGCAGTTGGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 90 bp GAGTGGAGTGCCAACTGCCCTGCCTCGCTCCAAACACCTGACTCCTaGGCCATGGCAAGAGTCCAGTCCATTAAGTGCAGCGTGCAATAC +
Preference number: 1 (lower is better)
Translates to: EWSANCPASLQTPDS*AMARVQSIKCSVQY
Trigger: GTATTGCACGCTGCACTTAATGGACTGGACTCTTGCCATGGCCCAGGAGTCAGGTGTTTGGAGCGAGGCAGGGCAGTTGGCACTCCACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 90 bp AGTAGCGAGGCCCTCTCGGGGGAGCCCAGAGGCTTACAAGGAGCCTaGGTAGAGCTTTGCTCTCTACTGGTTTCCTCCTCTCTCAACAGT +
Preference number: 1 (lower is better)
Translates to: SSEALSGEPRGLQGA*VELCSLLVSSSLNS
Trigger: ACTGTTGAGAGAGGAGGAAACCAGTAGAGAGCAAAGCTCTACCCAGGCTCCTTGTAAGCCTCTGGGCTCCCCCGAGAGGGCCTCGCTACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 90 bp CAGTGCAAGGGGAGCTCAGACCTGAAACCTTCTCACCCAAGGCCCTaGGCTGGTAGTACAGCAGTAAAGTCTGGCTGCCCAGGCAGAAGA +
Preference number: 1 (lower is better)
Translates to: QCKGSSDLKPSHPRP*AGSTAVKSGCPGRR
Trigger: TCTTCTGCCTGGGCAGCCAGACTTTACTGCTGTACTACCAGCCCAGGGCCTTGGGTGAGAAGGTTTCAGGTCTGAGCTCCCCTTGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 90 bp TCCCGGGGGCTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTaGAGAACCTTGGTAAGTAGGGAGGCTGGCCAGTGTGGACACACA +
Preference number: 1 (lower is better)
Translates to: SRGLTLYCPTGKGKQ*RTLVSREAGQCGHT
Trigger: TGTGTGTCCACACTGGCCAGCCTCCCTACTTACCAAGGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAGCCCCCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp ACACAGGGCCACCACACTGCCCAATCCCAGGGACCCCACTCCCACTaGATAGATGTGAATGATGGCCCTTCAAGTTGTGCAATCACAGCT +
Preference number: 1 (lower is better)
Translates to: TQGHHTAQSQGPHSH*IDVNDGPSSCAITA
Trigger: AGCTGTGATTGCACAACTTGAAGGGCCATCATTCACATCTATTCAGTGGGAGTGGGGTCCCTGGGATTGGGCAGTGTGGTGGCCCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 90 bp CTGACTCCTGGGCCATGGCAAGAGTCCAGTCCATTAAGTGCAGCGTaGAATACTAGCGCTTGGAGTCTCCTGTCCTCATCAATGAAGCGG +
Preference number: 1 (lower is better)
Translates to: LTPGPWQESSPLSAA*NTSAWSLLSSSMKR
Trigger: CCGCTTCATTGATGAGGACAGGAGACTCCAAGCGCTAGTATTGCACGCTGCACTTAATGGACTGGACTCTTGCCATGGCCCAGGAGTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 90 bp TCATCTATTCAGCCAGGAAGCTCAGCAGGAATAAAGGATATGGCCTaGGCAGGGAGCATCATAGGGCCTGGAGGCTCTAGCCAGTTAGCC +
Preference number: 1 (lower is better)
Translates to: SSIQPGSSAGIKDMA*AGSIIGPGGSSQLA
Trigger: GGCTAACTGGCTAGAGCCTCCAGGCCCTATGATGCTCCCTGCCCAGGCCATATCCTTTATTCCTGCTGAGCTTCCTGGCTGAATAGATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp AGAGCCAAGGTGGGCTGCTCCACACCTGAAGACTCATCCTATTACTaGACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCAGAG +
Preference number: 1 (lower is better)
Translates to: RAKVGCSTPEDSSYY*TSALFTHLASEASE
Trigger: CTCTGAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAGTCTTCAGGTGTGGAGCAGCCCACCTTGGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 90 bp ATGGCAACCCAGAACCAAGGTCTCTGTTCCTGTTCCTCAAGACCCTaGCCTATTAAACCCTTTCTGTCCCCAGCCCAGCACTTCATGGAC +
Preference number: 1 (lower is better)
Translates to: MATQNQGLCSCSSRP*PIKPFLSPAQHFMD
Trigger: GTCCATGAAGTGCTGGGCTGGGGACAGAAAGGGTTTAATAGGGCAGGGTCTTGAGGAACAGGAACAGAGACCTTGGTTCTGGGTTGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 90 bp TGGCAAGAGTCCAGTCCATTAAGTGCAGCGTGCAATACTAGCGCTTaGAGTCTCCTGTCCTCATCAATGAAGCGGTGTGGACGGGATAGC +
Preference number: 1 (lower is better)
Translates to: WQESSPLSAACNTSA*SLLSSSMKRCGRDS
Trigger: GCTATCCCGTCCACACCGCTTCATTGATGAGGACAGGAGACTCCAAGCGCTAGTATTGCACGCTGCACTTAATGGACTGGACTCTTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp AGAAGGTTTCCAAGGCCCAGAGCCAGTTATCTAGAAGGAAAGACGTaGCTGCAAGGTGACTACAGAATGGCCTGTAGCCCAGAGGGATGG +
Preference number: 1 (lower is better)
Translates to: RRFPRPRASYLEGKT*LQGDYRMACSPEGW
Trigger: CCATCCCTCTGGGCTACAGGCCATTCTGTAGTCACCTTGCAGTCACGTCTTTCCTTCTAGATAACTGGCTCTGGGCCTTGGAAACCTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 90 bp AATCTCGTCTCCTGCATCCTTGTGCACATCCCAGGGTCTCCTTCTTaGCTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTC +
Preference number: 1 (lower is better)
Translates to: NLVSCILVHIPGSPS*LLTVLLAHTNLQCL
Trigger: GAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAGGCAAGAAGGAGACCCTGGGATGTGCACAAGGATGCAGGAGACGAGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 90 bp AGACTAGGCAGGAGACAGCTGAATAAGGGAAACTGCAGGCAGCTCTaGAGAGGGAGGCTGGAACATCCCTTTAGAGCCAACAGTTTGAGA +
Preference number: 1 (lower is better)
Translates to: RLGRRQLNKGNCRQL*RGRLEHPFRANSLR
Trigger: TCTCAAACTGTTGGCTCTAAAGGGATGTTCCAGCCTCCCTCTCCAGAGCTGCCTGCAGTTTCCCTTATTCAGCTGTCTCCTGCCTAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp AGCTCTGGAGAGGGAGGCTGGAACATCCCTTTAGAGCCAACAGTTTaGGAAGACATCAGAGAAGTATGCAGGCAGTGGAAGACAAGCAGC +
Preference number: 1 (lower is better)
Translates to: SSGEGGWNIPLEPTV*EDIREVCRQWKTSS
Trigger: GCTGCTTGTCTTCCACTGCCTGCATACTTCTCTGATGTCTTCTCAAACTGTTGGCTCTAAAGGGATGTTCCAGCCTCCCTCTCCAGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp TCTCCTGCATCCTTGTGCACATCCCAGGGTCTCCTTCTTGCCTTCTaGCTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGA +
Preference number: 1 (lower is better)
Translates to: SPASLCTSQGLLLAF*LCCWLIQTFNASLG
Trigger: TCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAGGCAAGAAGGAGACCCTGGGATGTGCACAAGGATGCAGGAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp ACACACATCCACACGCATCCTCTCAGTTCATCAGTGCACTATAACTaGGCTTCAGGGGTGAGAGCCAGAGCTCAGATGCTGGAAGTAAAC +
Preference number: 1 (lower is better)
Translates to: THIHTHPLSSSVHYN*ASGVRARAQMLEVN
Trigger: GTTTACTTCCAGCATCTGAGCTCTGGCTCTCACCCCTGAAGCTCAGTTATAGTGCACTGATGAACTGAGAGGATGCGTGTGGATGTGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp AGATGGCTGAAGACAAGCAGAAGGGGCTACCACAGTGAGACAAGCTaGACCAGGATGTACAGAACTGACAATGGAAGGGCAAGAACACAC +
Preference number: 1 (lower is better)
Translates to: RWLKTSRRGYHSETS*TRMYRTDNGRARTH
Trigger: GTGTGTTCTTGCCCTTCCATTGTCAGTTCTGTACATCCTGGTTCAGCTTGTCTCACTGTGGTAGCCCCTTCTGCTTGTCTTCAGCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 90 bp CTGGACATAGTGCAATGCTTCTCCTCTATACACCATAATTCTAACTaGCTGCCTGTCTCCCCTACTGATCTGAGAGCACCACATGGGGAC +
Preference number: 1 (lower is better)
Translates to: LDIVQCFSSIHHNSN*LPVSPTDLRAPHGD
Trigger: GTCCCCATGTGGTGCTCTCAGATCAGTAGGGGAGACAGGCAGGCAGTTAGAATTATGGTGTATAGAGGAGAAGCATTGCACTATGTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 90 bp CCTTCTTGCCTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATaGCTCTTTAGGAACTGTCCTTTTATCTCCTTGGGGAGCAGCAGC +
Preference number: 1 (lower is better)
Translates to: PSCLLTVLLAHTNLQ*LFRNCPFISLGSSS
Trigger: GCTGCTGCTCCCCAAGGAGATAAAAGGACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAGGCAAGAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp CCAGCTGCCAGGGCCTTTCTCATTAAGATCTCTACTCCTGACATCTaGCTACGCAATATACTGTTTCCCTTTCAGCAACCACTGGGATGC +
Preference number: 1 (lower is better)
Translates to: PAARAFLIKISTPDI*LRNILFPFQQPLGC
Trigger: GCATCCCAGTGGTTGCTGAAAGGGAAACAGTATATTGCGTAGTCAGATGTCAGGAGTAGAGATCTTAATGAGAAAGGCCCTGGCAGCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 90 bp CAGCAGAATATGAGAAGTAACACAGAGACATGGGAAGAGCCAAGGTaGGCTGCTCCACACCTGAAGACTCATCCTATTACTGAACCTCAG +
Preference number: 1 (lower is better)
Translates to: QQNMRSNTETWEEPR*AAPHLKTHPITEPQ
Trigger: CTGAGGTTCAGTAATAGGATGAGTCTTCAGGTGTGGAGCAGCCCACCTTGGCTCTTCCCATGTCTCTGTGTTACTTCTCATATTCTGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp AGACCTGCTGAGGAGAACGAAAATAATCTACTATCTTTCCAAGTGTaGCTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCC +
Preference number: 1 (lower is better)
Translates to: RPAEENENNLLSFQV*LWPSFSSAPVLLFP
Trigger: GGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGAAAGATAGTAGATTATTTTCGTTCTCCTCAGCAGGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp TTTTTCCAAGACTTTGTTAGCAGGAGCCCAGAAGAACTTTCACCCTaGGCTGTATATTCTGCACCATCTTGGGCTGGGTCTGCCTTCAGA +
Preference number: 1 (lower is better)
Translates to: FFQDFVSRSPEELSP*AVYSAPSWAGSAFR
Trigger: TCTGAAGGCAGACCCAGCCCAAGATGGTGCAGAATATACAGCTCAGGGTGAAAGTTCTTCTGGGCTCCTGCTAACAAAGTCTTGGAAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp TGCTGTAACAACTTTGACTTCTGGTCACAATTCCTAAGGTTCTCCTaGCAGAATGCTGGCCTCCTCACCCTTAGTTCAGGGTCTTGTCCT +
Preference number: 1 (lower is better)
Translates to: CCNNFDFWSQFLRFS*QNAGLLTLSSGSCP
Trigger: AGGACAAGACCCTGAACTAAGGGTGAGGAGGCCAGCATTCTGTCAGGAGAACCTTAGGAATTGTGACCAGAAGTCAAAGTTGTTACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 90 bp ACAAGAACTTGTGGGTGCTGGCACTGTACACAGAGAAGTCTCCATTaGCAATATTCTCTTGCAGGTATTCAAGGTCCCATTTCAGGGCAG +
Preference number: 1 (lower is better)
Translates to: TRTCGCWHCTQRSLH*QYSLAGIQGPISGQ
Trigger: CTGCCCTGAAATGGGACCTTGAATACCTGCAAGAGAATATTGGCAATGGAGACTTCTCTGTGTACAGTGCCAGCACCCACAAGTTCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR GCA 90 bp AGCAGCAGGTTAGAGGTAAGCTGCCCCCAGCCACGCTTTCCCTGTTaGTTATTAATCCAGTTCCAGTTAAAACCTAAGAAGTCCATGACA +
Preference number: 1 (lower is better)
Translates to: SSRLEVSCPQPRFPC*LLIQFQLKPKKSMT
Trigger: TGTCATGGACTTCTTAGGTTTTAACTGGAACTGGATTAATAAGCAACAGGGAAAGCGTGGCTGGGGGCAGCTTACCTCTAACCTGCTGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR CCA 90 bp GTCAAGTTTCGGGCAGTTTGTCCATTTGCCCAAAGTCATGCAGAATaGCAGATCCAGGTATGCAGACTCCACTCTCAACCACTACACTAT +
Preference number: 1 (lower is better)
Translates to: VKFRAVCPFAQSHAE*QIQVCRLHSQPLHY
Trigger: ATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATCTGCCATTCTGCATGACTTTGGGCAAATGGACAAACTGCCCGAAACTTGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp CAGAGGTTACTGACAGGGGTAGGAACTGGTAACACAAGCATGAGTTaGCACTTATACCTCTGCTCTGCTCAGGAGCTGACAACTAGATAT +
Preference number: 1 (lower is better)
Translates to: QRLLTGVGTGNTSMS*HLYLCSAQELTTRY
Trigger: ATATCTAGTTGTCAGCTCCTGAGCAGAGCAGAGGTATAAGTGTCAACTCATGCTTGTGTTACCAGTTCCTACCCCTGTCAGTAACCTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp TCCCCTCCTCGCTGCTGTATATCCTGCAGTTTCTCAACGAACTCATaGAATTTCATTTCTTCCCTGTTGGACCTCGGCTTAAAGTTCTGG +
Preference number: 1 (lower is better)
Translates to: SPPRCCISCSFSTNS*NFISSLLDLGLKFW
Trigger: CCAGAACTTTAAGCCGAGGTCCAACAGGGAAGAAATGAAATTTCATGAGTTCGTTGAGAAACTGCAGGATATACAGCAGCGAGGAGGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR TCA 90 bp GAGACACTGACTTACCTAAGGTTAGAATTAGCTAGTGGCAAATGGTaGTTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAG +
Preference number: 1 (lower is better)
Translates to: ETLTYLRLELASGKW*FKPRSHLQSLCSCQ
Trigger: CTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATTTGCCACTAGCTAATTCTAACCTTAGGTAAGTCAGTGTCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 90 bp GTGCTGGCACTGTACACAGAGAAGTCTCCATTGCCAATATTCTCTTaGAGGTATTCAAGGTCCCATTTCAGGGCAGGATACACAAGATTT +
Preference number: 1 (lower is better)
Translates to: VLALYTEKSPLPIFS*RYSRSHFRAGYTRF
Trigger: AAATCTTGTGTATCCTGCCCTGAAATGGGACCTTGAATACCTGCAAGAGAATATTGGCAATGGAGACTTCTCTGTGTACAGTGCCAGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR TCA 90 bp GCTACAAATAAGCAAGTCCAATCTACGTCCACTCCAGGACAAATCTaGGCCAGCAACCAAGACTTTCAGATTTCTGTGACTAACCAAAGG +
Preference number: 1 (lower is better)
Translates to: ATNKQVQSTSTPGQI*ASNQDFQISVTNQR
Trigger: CCTTTGGTTAGTCACAGAAATCTGAAAGTCTTGGTTGCTGGCTCAGATTTGTCCTGGAGTGGACGTAGATTGGACTTGCTTATTTGTAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp GCTACAAGTTATGTGCTATTTCCTACCCCTCACAGAGGAAGAGGTTaGGACCCAGAGACACTGACTTACCTAAGGTTAGAATTAGCTAGT +
Preference number: 1 (lower is better)
Translates to: ATSYVLFPTPHRGRG*DPETLTYLRLELAS
Trigger: ACTAGCTAATTCTAACCTTAGGTAAGTCAGTGTCTCTGGGTCTCAACCTCTTCCTCTGTGAGGGGTAGGAAATAGCACATAACTTGTAGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp ATGCTCCCTCTTACAGAACTGATCTCTCCTCAGAAAAGGGAAATCTaGTGTTACTTGTTCACACTAAGACATGCACAGTTGAGTCCTCCT +
Preference number: 1 (lower is better)
Translates to: MLPLTELISPQKREI*CYLFTLRHAQLSPP
Trigger: AGGAGGACTCAACTGTGCATGTCTTAGTGTGAACAAGTAACATCAGATTTCCCTTTTCTGAGGAGAGATCAGTTCTGTAAGAGGGAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp TCCATGATTCTTCCCCATTCACACTCATGCTCCCTCTTACAGAACTaGTCTCTCCTCAGAAAAGGGAAATCTGATGTTACTTGTTCACAC +
Preference number: 1 (lower is better)
Translates to: SMILPHSHSCSLLQN*SLLRKGKSDVTCSH
Trigger: GTGTGAACAAGTAACATCAGATTTCCCTTTTCTGAGGAGAGATCAGTTCTGTAAGAGGGAGCATGAGTGTGAATGGGGAAGAATCATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 90 bp TCCTCAGAAAAGGGAAATCTGATGTTACTTGTTCACACTAAGACATaGACAGTTGAGTCCTCCTGTTTATGCTGGGTAAACGATGCTTCC +
Preference number: 1 (lower is better)
Translates to: SSEKGNLMLLVHTKT*TVESSCLCWVNDAS
Trigger: GGAAGCATCGTTTACCCAGCATAAACAGGAGGACTCAACTGTGCATGTCTTAGTGTGAACAAGTAACATCAGATTTCCCTTTTCTGAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 90 bp GGAAATTGGCCATCTTCTTCTCATCATAGTACAAGAACTTGTGGGTaGTGGCACTGTACACAGAGAAGTCTCCATTGCCAATATTCTCTT +
Preference number: 1 (lower is better)
Translates to: GNWPSSSHHSTRTCG*WHCTQRSLHCQYSL
Trigger: AAGAGAATATTGGCAATGGAGACTTCTCTGTGTACAGTGCCAGCACCCACAAGTTCTTGTACTATGATGAGAAGAAGATGGCCAATTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR CCA 90 bp TTATGCACAATCATTGGTTCTTATGTCCCAAGGTCCTTTTATGTATaGCTTGAGCTTGTAGGCCCAGTTGGAACCCTATCTAATCCTCTC +
Preference number: 1 (lower is better)
Translates to: LCTIIGSYVPRSFYV*LELVGPVGTLSNPL
Trigger: GAGAGGATTAGATAGGGTTCCAACTGGGCCTACAAGCTCAAGCCATACATAAAAGGACCTTGGGACATAAGAACCAATGATTGTGCATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 90 bp AATTGGCCATCTTCTTCTCATCATAGTACAAGAACTTGTGGGTGCTaGCACTGTACACAGAGAAGTCTCCATTGCCAATATTCTCTTGCA +
Preference number: 1 (lower is better)
Translates to: NWPSSSHHSTRTCGC*HCTQRSLHCQYSLA
Trigger: TGCAAGAGAATATTGGCAATGGAGACTTCTCTGTGTACAGTGCCAGCACCCACAAGTTCTTGTACTATGATGAGAAGAAGATGGCCAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR GCA 90 bp GTTTGTCCATTTGCCCAAAGTCATGCAGAATGGCAGATCCAGGTATaGAGACTCCACTCTCAACCACTACACTATATTGCACTATATATA +
Preference number: 1 (lower is better)
Translates to: VCPFAQSHAEWQIQV*RLHSQPLHYIALYI
Trigger: TATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATCTGCCATTCTGCATGACTTTGGGCAAATGGACAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 90 bp TTGCCTTATAGCTTGTACCTGACACTCATCTATTTCTATCTTTGTTaGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTG +
Preference number: 1 (lower is better)
Translates to: LPYSLYLTLIYFYLC*LMPKDVCSYIHLRL
Trigger: CAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAAGATAGAAATAGATGAGTGTCAGGTACAAGCTATAAGGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 90 bp TTAAACACACCTGTTCTTCATCCTAAGTCCTCCATCATTAAAAGATaGACACCTACCAAGGAAACACCTGATGCCACTGCATGTATTTTG +
Preference number: 1 (lower is better)
Translates to: LNTPVLHPKSSIIKR*TPTKETPDATACIL
Trigger: CAAAATACATGCAGTGGCATCAGGTGTTTCCTTGGTAGGTGTGCATCTTTTAATGATGGAGGACTTAGGATGAAGAACAGGTGTGTTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 90 bp AAGAAGTGGAGAGATAGAGATCACTGCAATCACATTTCCCAGCATTaGCTATATTTGAAAGAGCTACACTTGAGAAGGTACCATATCTTC +
Preference number: 1 (lower is better)
Translates to: KKWRDRDHCNHISQH*LYLKELHLRRYHIF
Trigger: GAAGATATGGTACCTTCTCAAGTGTAGCTCTTTCAAATATAGTCAATGCTGGGAAATGTGATTGCAGTGATCTCTATCTCTCCACTTCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 90 bp ACTACACTATATTGCACTATATATATTCAAGAGGTAATAAAAACCTaGCCCAAGCTTAGCTTAGATGATGGGTTAAGGAGCACAGCTTTC +
Preference number: 1 (lower is better)
Translates to: TTLYCTIYIQEVIKT*PKLSLDDGLRSTAF
Trigger: GAAAGCTGTGCTCCTTAACCCATCATCTAAGCTAAGCTTGGGCCAGGTTTTTATTACCTCTTGAATATATATAGTGCAATATAGTGTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp TCCCGGGGGCTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCGCCCTGCAGCCCAGATaGAGTGGGGAGTCCAAGAGC +
Preference number: 2 (lower is better)
Translates to: SRGLTLYCPTGKGKQWRTALQPR*SGESKS
Trigger: GCTCTTGGACTCCCCACTGCATCTGGGCTGCAGGGC...GGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAGCCCCCGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp TCTGGCAGAGGAGCTGGCTTTAAGACGCAAGCCTATGTGTTTGCCCGTGCCCTGCCGGAAGTGACAGCCTaGCCCAGAAGGAACAGGGAA +
Preference number: 2 (lower is better)
Translates to: SGRGAGFKTQAYVFARALPEVTA*PRRNRE
Trigger: TTCCCTGTTCCTTCTGGGTCAGGCTGTCACTTCCGG...CAGGGCACGGGCAAACACATAGGCTTGCGTCTTAAAGCCAGCTCCTCTGCCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGACAGGGCCACCACACTaGCCAATCCCAGGGACCCCA +
Preference number: 2 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMTGPPH*PIPGTP
Trigger: TGGGGTCCCTGGGATTGGGCAGTGTGGTGGCCCTGT...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 90 bp CCTCTCGGGGGAGCCCAGAGGCTTACAAGGAGCCTGGGTAGAGCTTaGCTCTCTACTGGTTTCCTCCTCTCTCAACAGTCCCTAATCTTG +
Preference number: 2 (lower is better)
Translates to: PLGGAQRLTRSLGRA*LSTGFLLSQQSLIL
Trigger: CAAGATTAGGGACTGTTGAGAGAGGAGGAAACCAGTAGAGAGCAAAGCTCTACCCAGGCTCCTTGTAAGCCTCTGGGCTCCCCCGAGAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp CAGATGACTGAGATTGCAGAACAACCAGATATGTTGGTTGGGCCACTGACTAGACTCTGGAGGCCTCACTaGCCACACGCCCCCAGGCCT +
Preference number: 2 (lower is better)
Translates to: QMTEIAEQPDMLVGPLTRLWRPH*PHAPRP
Trigger: AGGCCTGGGGGCGTGTGGTCAGTGAGGCCTCCAGAG...TCTAGTCAGTGGCCCAACCAACATATCTGGTTGTTCTGCAATCTCAGTCATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp AAGCTTAGGATAGGTCAGGCAGTACTTCCCGGGGGCTCACACTGTACTGTCCCAACACACCCAGAGGCTTaGACCCCTAGTGTGGATACG +
Preference number: 2 (lower is better)
Translates to: KLRIGQAVLPGGSHCTVPTHPEA*TPSVDT
Trigger: CGTATCCACACTAGGGGTGCAAGCCTCTGGGTGTGT...TGGGACAGTACAGTGTGAGCCCCCGGGAAGTACTGCCTGACCTATCCTAAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCGCTGAGAGCCGGAAGTaGCAGCCTGACCCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLAESRK*QPDPEG
Trigger: TCCTTCTGGGTCAGGCTGTCACTTCCGGCTCTCAGC...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp AGTCGGGATTGTCAAAGTCCACCTGGCTCTGTCTGTCACATGGGTGATGAACAGAGGTTAGAGGTAAGCTaGCCCCAGCCACGCTTTCCC +
Preference number: 2 (lower is better)
Translates to: SRDCQSPPGSVCHMGDEQRLEVS*PQPRFP
Trigger: GGGAAAGCGTGGCTGGGGGCAGCTTACCTCTAACCT...CTGTTCATCACCCATGTGACAGACAGAGCCAGGTGGACTTTGACAATCCCGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR-3UTR CCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGGCAGCCCAGATGCAGTaGGGAGTCCAAGAGCATCTC +
Preference number: 2 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMAAQMQ*GVQEHL
Trigger: GAGATGCTCTTGGACTCCCCACTGCATCTGGGCTGC...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 90 bp CTTGCACCCCTAGAACCTAGAGAAGCCACAGCTAGGAGAACTCCCTaGGTACCCAGCATAGGGGCAAGAGCTGGTGCTGAAAGAGAGAAA +
Preference number: 2 (lower is better)
Translates to: LAPLEPREATARRTP*VPSIGARAGAEREK
Trigger: TTTCTCTCTTTCAGCACCAGCTCTTGCCCCTATGCTGGGTACCAAGGGAGTTCTCCTAGCTGTGGCTTCTCTAGGTTCTAGGGGTGCAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 90 bp CTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCTaGGTAAGTAGGGAGGCTGGCCAGTGTGGACACACACACACACAC +
Preference number: 2 (lower is better)
Translates to: LTLYCPTGKGKQWRT*VSREAGQCGHTHTH
Trigger: GTGTGTGTGTGTGTGTCCACACTGGCCAGCCTCCCTACTTACCAAGGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp TCTGGCAGAGGAGCTGGCTTTAAGACGCAAGCCTATGTGTTTGCCCGTGCCCTGCTTTTATGTATGGCTTaGGCTTGTAGGCCCAGTTGG +
Preference number: 2 (lower is better)
Translates to: SGRGAGFKTQAYVFARALLLCMA*ACRPSW
Trigger: CCAACTGGGCCTACAAGCTCAAGCCATACATAAAAG...CAGGGCACGGGCAAACACATAGGCTTGCGTCTTAAAGCCAGCTCCTCTGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp TCTGGCAGAGGAGCTGGCTTTAAGACGCAAGCCTATGTGTTTGCCCGTGCCCTGCCATTAAGTGCAGCGTaGAATACTAGCGCTTGGAGT +
Preference number: 2 (lower is better)
Translates to: SGRGAGFKTQAYVFARALPLSAA*NTSAWS
Trigger: ACTCCAAGCGCTAGTATTGCACGCTGCACTTAATGG...CAGGGCACGGGCAAACACATAGGCTTGCGTCTTAAAGCCAGCTCCTCTGCCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCGAGTGGAGTGCCAACTaGCCTGCCTCGCTCCAAACA +
Preference number: 2 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLEWSAN*PASLQT
Trigger: TGTTTGGAGCGAGGCAGGGCAGTTGGCACTCCACTC...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 90 bp GAGCCCAGAAGAACTTTCACCCTGAGCTGTATATTCTGCACCATCTaGGGCTGGGTCTGCCTTCAGATACTGCCCAGTGGGGTGATATCT +
Preference number: 2 (lower is better)
Translates to: EPRRTFTLSCIFCTI*GWVCLQILPSGVIS
Trigger: AGATATCACCCCACTGGGCAGTATCTGAAGGCAGACCCAGCCCAAGATGGTGCAGAATATACAGCTCAGGGTGAAAGTTCTTCTGGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 90 bp CTGAGGCAAGAGGATCTGAGTATTTATAGAGAACTGCAGGGAGACTaGGCTTATAGTGAGGAGGAGAGGTGGCTGGGCGTGGGGATAGAC +
Preference number: 2 (lower is better)
Translates to: LRQEDLSIYRELQGD*AYSEEERWLGVGID
Trigger: GTCTATCCCCACGCCCAGCCACCTCTCCTCCTCACTATAAGCCAAGTCTCCCTGCAGTTCTCTATAAATACTCAGATCCTCTTGCCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 90 bp CAATCTCGTCTCCTGCATCCTTGTGCACATCCCAGGGTCTCCTTCTaGCCTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCT +
Preference number: 2 (lower is better)
Translates to: QSRLLHPCAHPRVSF*PSDCAAGSYKPSMP
Trigger: AGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAGGCAAGAAGGAGACCCTGGGATGTGCACAAGGATGCAGGAGACGAGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCATCTACCCCATCTGGGTaGAACTGGTCCCTGAGGGTC +
Preference number: 2 (lower is better)
Translates to: NGDSNPGVTSKASVLVSASTPSG*NWSLRV
Trigger: GACCCTCAGGGACCAGTTTCACCCAGATGGGGTAGA...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAATGCCCACCTGTAAGCTaGAGCCCTGAGAGGGGTTCC +
Preference number: 2 (lower is better)
Translates to: FVGSCPKMSVPISISGWQCPPVS*SPERGS
Trigger: GGAACCCCTCTCAGGGCTGCAGCTTACAGGTGGGCA...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTATCTTGGGCTGGGTCTaGCTTCAGATACTGCCCAGT +
Preference number: 2 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTILGWV*LQILPS
Trigger: ACTGGGCAGTATCTGAAGGCAGACCCAGCCCAAGAT...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTTCTCCTGCATCCTTGTaGACATCCCAGGGTCTCCTT +
Preference number: 2 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTSPASL*TSQGLL
Trigger: AAGGAGACCCTGGGATGTGCACAAGGATGCAGGAGA...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTTGCACCATCTTGGGCTaGGTCTGCCTTCAGATACTG +
Preference number: 2 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTCTILG*VCLQIL
Trigger: CAGTATCTGAAGGCAGACCCAGCCCAAGATGGTGCA...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTCTTCCAAGTAGGGTCTaGCAGGGTGGCTCCAGAGGC +
Preference number: 2 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCLPSRV*QGGSRG
Trigger: GCCTCTGGAGCCACCCTGCCAGACCCTACTTGGAAG...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp ACACGCACGCACACACACACACACACCCAGAGGCTTGCACCCCTAGTGTGGATACACACATTCCGAAGTTaGCAGACTAACATACACACA +
Preference number: 2 (lower is better)
Translates to: TRTHTHTHTQRLAPLVWIHTFRS*QTNIHT
Trigger: TGTGTGTATGTTAGTCTGTCAACTTCGGAATGTGTG...TATCCACACTAGGGGTGCAAGCCTCTGGGTGTGTGTGTGTGTGTGCGTGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp TTTTCCTCACGCCCTACAGTGCTGGAATGTAACAAGTACTTGTCACAGGTGGGCCACATCTTTGAGCGCTaGGCGAGGAATACAGCAGAC +
Preference number: 2 (lower is better)
Translates to: FSSRPTVLECNKYLSQVGHIFER*ARNTAD
Trigger: GTCTGCTGTATTCCTCGCTCAGCGCTCAAAGATGTG...GCCCACCTGTGACAAGTACTTGTTACATTCCAGCACTGTAGGGCGTGAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGGAGTGCATGCCTCCTTaGCACATCACCCACATCTTT +
Preference number: 2 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMECMPP*HITHIF
Trigger: AAAGATGTGGGTGATGTGTCAAGGAGGCATGCACTC...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCAAGCCTGCAGCGTAGCTaGCCTCTATACAGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: NGDSNPGVTSKASVLVSASLQRS*PLYRPK
Trigger: TTTGGGCCTGTATAGAGGTCAGCTACGCTGCAGGCT...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTGCCCATCACCACCCTaGAAAGGGGATATTGGTATC +
Preference number: 2 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMCPSPP*KGDIGI
Trigger: GATACCAATATCCCCTTTGCAGGGTGGTGATGGGCA...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGATAAAGGATATGGCCTaGGCAGGGAGCATCATAGGG +
Preference number: 2 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMIKDMA*AGSIIG
Trigger: CCCTATGATGCTCCCTGCCCAGGCCATATCCTTTAT...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCACTATTGAGGGTGTTGTaGCACATTACAACGGGGTCT +
Preference number: 2 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPLLRVL*HITTGS
Trigger: AGACCCCGTTGTAATGTGCCACAACACCCTCAATAG...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATATGTTTGCCCGTGCCCTaGGGTGGATCACAGGTAGTG +
Preference number: 2 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPICLPVP*GGSQVV
Trigger: CACTACCTGTGATCCACCTCAGGGCACGGGCAAACA...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGCAGGATGTACAGAACTaGCAATGGAAGGGCAAGAAC +
Preference number: 2 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMQDVQN*QWKGKN
Trigger: GTTCTTGCCCTTCCATTGTCAGTTCTGTACATCCTG...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp ATTGTCAAAGTCCACCTGGCTCTGTCTGTCACATGGGTGATGAACAGGGTATGGTGCCCACAGTGTCATTaGGCGTTTGCTGCAGATACA +
Preference number: 2 (lower is better)
Translates to: IVKVHLALSVTWVMNRVWCPQCH*AFAADT
Trigger: TGTATCTGCAGCAAACGCTCAATGACACTGTGGGCA...CCATACCCTGTTCATCACCCATGTGACAGACAGAGCCAGGTGGACTTTGACAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR-3UTR GCA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTGCAAGCCTATGTGTTTaGCCGTGCCCTGAGGTGGAT +
Preference number: 2 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCASLCV*PCPEVD
Trigger: ATCCACCTCAGGGCACGGGCAAACACATAGGCTTGC...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCCTGAGCTGTATATTCTaGACCATCTTGGGCTGGGTC +
Preference number: 2 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLLSCIF*TILGWV
Trigger: GACCCAGCCCAAGATGGTGCAGAATATACAGCTCAG...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp AGCACCATTATCTTGAGAGTCAGAGTAGGATCAGAAAAGCCTTGCTGCTGTAGTCCACACAGCCACAGCTaGACTGATGTGGGGTTGTGG +
Preference number: 2 (lower is better)
Translates to: STIILRVRVGSEKPCCCSPHSHS*TDVGLW
Trigger: CCACAACCCCACATCAGTGCAGCTGTGGCTGTGTGG...ACTACAGCAGCAAGGCTTTTCTGATCCTACTCTGACTCTCAAGATAATGGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTAGAGCCAAGGTGGGCTaGTCCACACCTGAAGACTCA +
Preference number: 2 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCRAKVG*STPEDS
Trigger: TGAGTCTTCAGGTGTGGAGCAGCCCACCTTGGCTCT...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTCGGCCTCTCACACAGTaGAAGGGGAGCTCAGACCTG +
Preference number: 2 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSRPLTQ*KGSSDL
Trigger: CAGGTCTGAGCTCCCCTTGCACTGTGTGAGAGGCCG...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTTCAGAAAAGCCTTGCTaGTGTAGTCTCTCCAGACAC +
Preference number: 2 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTSEKPC*CSLSRH
Trigger: GTGTCTGGAGAGACTACAGCAGCAAGGCTTTTCTGA...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTCCACAGACATCCTCCTaGCCCATTTCCTTTACTCTT +
Preference number: 2 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTPQTSS*PISFTL
Trigger: AAGAGTAAAGGAAATGGGGCAGGAGGATGTCTGTGG...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp AGCAGGTTAGAGGTAAGCTGCCCCCAGCCACGCTTTCCCTGTTGCTTATTAATCACAAGAACTTGTGGGTaGTGGCACTGTACACAGAGA +
Preference number: 2 (lower is better)
Translates to: SRLEVSCPQPRFPCCLLITRTCG*WHCTQR
Trigger: TCTCTGTGTACAGTGCCAGCACCCACAAGTTCTTGT...GATTAATAAGCAACAGGGAAAGCGTGGCTGGGGGCAGCTTACCTCTAACCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR-3UTR GCA 90 bp GGTGTCACATTTCCTTCCATGCCAATGAGCAGCAGGTTAGAGGTAAGCTGCCCCCGCTGCTGTATATCCTaGAGTTTCTCAACGAACTCA +
Preference number: 2 (lower is better)
Translates to: GVTFPSMPMSSRLEVSCPRCCIS*SFSTNS
Trigger: TGAGTTCGTTGAGAAACTGCAGGATATACAGCAGCG...GGGGCAGCTTACCTCTAACCTGCTGCTCATTGGCATGGAAGGAAATGTGACACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR-3UTR CCA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCACTGACTCCTGGGCCATaGCAAGAGTCCAGTCCATTA +
Preference number: 2 (lower is better)
Translates to: NGDSNPGVTSKASVLVSALTPGP*QESSPL
Trigger: TAATGGACTGGACTCTTGCCATGGCCCAGGAGTCAG...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATACTCCCCCAGGCATCCTaGGCATCTGCTCAACTGATG +
Preference number: 2 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPILPQAS*ASAQLM
Trigger: CATCAGTTGAGCAGATGCCCAGGATGCCTGGGGGAG...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAAAGTGTCTCCCCATACTaGGCTGGCCCACTGATAAGG +
Preference number: 2 (lower is better)
Translates to: FVGSCPKMSVPISISGWQSVSPY*AGPLIR
Trigger: CCTTATCAGTGGGCCAGCCCAGTATGGGGAGACACT...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 90 bp TTAAAACCTAAGAAGTCCATGACAATCTTCCTGCCCACAGTGTCATaGAGCGTTTGCTGCAGATACAACCTCTCTTCCCCTCCTCGCTGC +
Preference number: 2 (lower is better)
Translates to: LKPKKSMTIFLPTVS*SVCCRYNLSSPPRC
Trigger: GCAGCGAGGAGGGGAAGAGAGGTTGTATCTGCAGCAAACGCTCAATGACACTGTGGGCAGGAAGATTGTCATGGACTTCTTAGGTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR-3UTR TCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAATCCTGTCCTCATCAATaGAGCGGTGTGGACGGGATA +
Preference number: 2 (lower is better)
Translates to: FVGSCPKMSVPISISGWQSCPHQ*SGVDGI
Trigger: TATCCCGTCCACACCGCTTCATTGATGAGGACAGGA...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATAATCTCTCTCTCAGGCTaGGGCACTGAGGTTGCAGGA +
Preference number: 2 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPIISLSG*GTEVAG
Trigger: TCCTGCAACCTCAGTGCCTCAGCCTGAGAGAGAGAT...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATACTCCACCAGTTGCCCTaGCTATTGAGGGTGTTGTGG +
Preference number: 2 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPILHQLP*LLRVLW
Trigger: CCACAACACCCTCAATAGTCAGGGCAACTGGTGGAG...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp CAGATGACTGAGATTGCAGAACAACCAGATATGTTGGTTGGGCCACTGACTAGAGGACCCCACTCCCACTaGATAGATGTGAATGATGGC +
Preference number: 2 (lower is better)
Translates to: QMTEIAEQPDMLVGPLTRGPHSH*IDVNDG
Trigger: GCCATCATTCACATCTATTCAGTGGGAGTGGGGTCC...TCTAGTCAGTGGCCCAACCAACATATCTGGTTGTTCTGCAATCTCAGTCATCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTTCAGTGCACTATAACTaGGCTTCAGGGGTGAGAGCC +
Preference number: 2 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVSVHYN*ASGVRA
Trigger: GGCTCTCACCCCTGAAGCTCAGTTATAGTGCACTGA...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAACATCACCCACATCTTTaGGCGCTGAGCGAGGAATAC +
Preference number: 2 (lower is better)
Translates to: FVGSCPKMSVPISISGWQHHPHL*ALSEEY
Trigger: GTATTCCTCGCTCAGCGCTCAAAGATGTGGGTGATG...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCAATAGTCTCAAACTCCTaGCCTCAGGTGATCCACCCA +
Preference number: 2 (lower is better)
Translates to: NGDSNPGVTSKASVLVSAIVSNS*PQVIHP
Trigger: TGGGTGGATCACCTGAGGTCAGGAGTTTGAGACTAT...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp AGCACCATTATCTTGAGAGTCAGAGTAGGATCAGAAAAGCCTTGCTGCTGTAGTGACCAGCTGAGTGCATaGCTCCTTGACACATCACCC +
Preference number: 2 (lower is better)
Translates to: STIILRVRVGSEKPCCCSDQLSA*LLDTSP
Trigger: GGGTGATGTGTCAAGGAGGCATGCACTCAGCTGGTC...ACTACAGCAGCAAGGCTTTTCTGATCCTACTCTGACTCTCAAGATAATGGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTCTTCAGTTCTATAGATaGAAAAGCATGCCGGGAGGA +
Preference number: 2 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTLQFYR*KSMPGG
Trigger: TCCTCCCGGCATGCTTTTGCATCTATAGAACTGAAG...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAAACCCCCACCTTCACTTaGTGTATGTGTGTGTCCCAC +
Preference number: 2 (lower is better)
Translates to: FVGSCPKMSVPISISGWQTPTFT*CMCVSH
Trigger: GTGGGACACACACATACAGCAAGTGAAGGTGGGGGT...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATGGGATAGCAGTCACCTaGCAGGAGGCCTTGACCCCT +
Preference number: 2 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYGIAVT*QEALTP
Trigger: AGGGGTCAAGGCCTCCTGCCAGGTGACTGCTATCCC...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATACAAACACCTGACTCCTaGGCCATGGCAAGAGTCCAG +
Preference number: 2 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPIQTPDS*AMARVQ
Trigger: CTGGACTCTTGCCATGGCCCAGGAGTCAGGTGTTTG...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTAGGTCCTTTTATGTATaGCTTGAGCTTGTAGGCCCA +
Preference number: 2 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTRSFYV*LELVGP
Trigger: TGGGCCTACAAGCTCAAGCCATACATAAAAGGACCT...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCAAGTAACACAGAGACATaGGAAGAGCCAAGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: NGDSNPGVTSKASVLVSASNTET*EEPRWA
Trigger: AGCCCACCTTGGCTCTTCCCATGTCTCTGTGTTACT...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp CAGATGACTGAGATTGCAGAACAACCAGATATGTTGGTTGGGCCACTGACTAGATCTGGAGAGGGAGGCTaGAACATCCCTTTAGAGCCA +
Preference number: 2 (lower is better)
Translates to: QMTEIAEQPDMLVGPLTRSGEGG*NIPLEP
Trigger: TGGCTCTAAAGGGATGTTCCAGCCTCCCTCTCCAGA...TCTAGTCAGTGGCCCAACCAACATATCTGGTTGTTCTGCAATCTCAGTCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp ACATGGGTGATGAACAGGGTATGGGTAGAGGCACTCGAACTGATCCGGAGGGAACTCGGCTTAAAGTTCTaGAAATTGGCCATCTTCTTC +
Preference number: 2 (lower is better)
Translates to: TWVMNRVWVEALELIRRELGLKF*KLAIFF
Trigger: GAAGAAGATGGCCAATTTCCAGAACTTTAAGCCGAG...TTCCCTCCGGATCAGTTCGAGTGCCTCTACCCATACCCTGTTCATCACCCATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR-3UTR TCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTTGGGACTCCACACACTaGATGCAGGACTTTAGGCGG +
Preference number: 2 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSWDSTH*MQDFRR
Trigger: CCGCCTAAAGTCCTGCATTCAGTGTGTGGAGTCCCA...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGGCTGGTGTGAATAGATaGGCCTGCAGCGTAGCTGAC +
Preference number: 2 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQAGVNR*ACSVAD
Trigger: GTCAGCTACGCTGCAGGCTCATCTATTCACACCAGC...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGCTGTACCTGCTGGTGTaGATAGATGAGCCTGCAGCG +
Preference number: 2 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQLYLLV*IDEPAA
Trigger: CGCTGCAGGCTCATCTATTCACACCAGCAGGTACAG...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCACAGCCATGGAGTTTCTaGGGGAAGGACAACTGTTTA +
Preference number: 2 (lower is better)
Translates to: NGDSNPGVTSKASVLVSAQPWSF*GKDNCL
Trigger: TAAACAGTTGTCCTTCCCTCAGAAACTCCATGGCTG...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTGAGACGGCCCTAAGATaGTCAGGGATGACCAGAGAG +
Preference number: 2 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSETALR*SGMTRE
Trigger: CTCTCTGGTCATCCCTGATCATCTTAGGGCCGTCTC...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGCAAATAGGAGTGGAGTaGCAACTGCCCTGCCTCGCT +
Preference number: 2 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQQIGVE*QLPCLA
Trigger: AGCGAGGCAGGGCAGTTGGCACTCCACTCCTATTTG...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTCTATGTGTTTGCCCGTaGCCTGAGGTGGATCACAGG +
Preference number: 2 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSLCVCP*PEVDHR
Trigger: CCTGTGATCCACCTCAGGGCACGGGCAAACACATAG...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp CAGATGACTGAGATTGCAGAACAACCAGATATGTTGGTTGGGCCACTGACTAGAGAAAGACTGAGCCCTTaGTATGGACCGGTCATTCTG +
Preference number: 2 (lower is better)
Translates to: QMTEIAEQPDMLVGPLTRERLSP*YGPVIL
Trigger: CAGAATGACCGGTCCATAGCAAGGGCTCAGTCTTTC...TCTAGTCAGTGGCCCAACCAACATATCTGGTTGTTCTGCAATCTCAGTCATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGTATTCTGCACCATCTTaGGCTGGGTCTGCCTTCAGA +
Preference number: 2 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRYSAPS*AGSAFR
Trigger: TCTGAAGGCAGACCCAGCCCAAGATGGTGCAGAATA...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGCTCCCCATACTGGGCTaGCCCACTGATAAGGATCCT +
Preference number: 2 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQLPILG*PTDKDP
Trigger: AGGATCCTTATCAGTGGGCCAGCCCAGTATGGGGAG...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTGGCTTACAAGGAGCCTaGGTAGAGCTTTGCTCTCTA +
Preference number: 2 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVGLQGA*VELCSL
Trigger: TAGAGAGCAAAGCTCTACCCAGGCTCCTTGTAAGCC...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTAGCCTCCCGAGTAGCTaGGATTACAGGTACCCACCA +
Preference number: 2 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSSLPSS*DYRYPP
Trigger: TGGTGGGTACCTGTAATCCCAGCTACTCGGGAGGCT...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGAATGGGATCATGATGTaGAAAGGGCTGAGAATTCCA +
Preference number: 2 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMNGIMM*KGLRIP
Trigger: TGGAATTCTCAGCCCTTTCCACATCATGATCCCATT...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp CAGATGACTGAGATTGCAGAACAACCAGATATGTTGGTTGGGCCACTGACTAGAAAGGTGACTACAGAATaGCCTGTAGCCCAGAGGGAT +
Preference number: 2 (lower is better)
Translates to: QMTEIAEQPDMLVGPLTRKVTTE*PVAQRD
Trigger: ATCCCTCTGGGCTACAGGCCATTCTGTAGTCACCTT...TCTAGTCAGTGGCCCAACCAACATATCTGGTTGTTCTGCAATCTCAGTCATCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 90 bp CAAATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTaGTCAGTGCATCACACAAACCCTTGTGAGAACAATGACCATGCA +
Preference number: 2 (lower is better)
Translates to: QMVIQTQESPPKPLF*SVHHTNPCENNDHA
Trigger: TGCATGGTCATTGTTCTCACAAGGGTTTGTGTGATGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 90 bp GGTGCTGGCACTGTACACAGAGAAGTCTCCATTGCCAATATTCTCTaGCAGGTATTCAAGGTCCCATTTCAGGGCAGGATACACAAGATT +
Preference number: 2 (lower is better)
Translates to: GAGTVHREVSIANIL*QVFKVPFQGRIHKI
Trigger: AATCTTGTGTATCCTGCCCTGAAATGGGACCTTGAATACCTGCAAGAGAATATTGGCAATGGAGACTTCTCTGTGTACAGTGCCAGCACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR CAA 90 bp TACAAGAACTTGTGGGTGCTGGCACTGTACACAGAGAAGTCTCCATaGCCAATATTCTCTTGCAGGTATTCAAGGTCCCATTTCAGGGCA +
Preference number: 2 (lower is better)
Translates to: YKNLWVLALYTEKSP*PIFSCRYSRSHFRA
Trigger: TGCCCTGAAATGGGACCTTGAATACCTGCAAGAGAATATTGGCAATGGAGACTTCTCTGTGTACAGTGCCAGCACCCACAAGTTCTTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR-3UTR TCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAAAGTTGCCCTGACTATTaGGGGTGTTGTGGCACATTA +
Preference number: 2 (lower is better)
Translates to: FVGSCPKMSVPISISGWQSCPDY*GCCGTL
Trigger: TAATGTGCCACAACACCCTCAATAGTCAGGGCAACT...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCAGAAGAACTTTCACCCTaGGCTGTATATTCTGCACCA +
Preference number: 2 (lower is better)
Translates to: NGDSNPGVTSKASVLVSAEELSP*AVYSAP
Trigger: TGGTGCAGAATATACAGCTCAGGGTGAAAGTTCTTC...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATAAAACCATTACGCAAATaGGAGCAGACGACTTCCCCC +
Preference number: 2 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPIKPLRK*EQTTSP
Trigger: GGGGGAAGTCGTCTGCTCTCATTTGCGTAATGGTTT...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTCAGACTCTGGAGCCCTaGGCTACTTCTAGGTATACC +
Preference number: 2 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSQTLEP*ATSRYT
Trigger: GGTATACCTAGAAGTAGCTCAGGGCTCCAGAGTCTG...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp AGCACCATTATCTTGAGAGTCAGAGTAGGATCAGAAAAGCCTTGCTGCTGTAGTTGGAAGACAAGCAGCTaGAGGTCTCAAAGGGGAGTA +
Preference number: 2 (lower is better)
Translates to: STIILRVRVGSEKPCCCSWKTSS*RSQRGV
Trigger: TACTCCCCTTTGAGACCTTCAGCTGCTTGTCTTCCA...ACTACAGCAGCAAGGCTTTTCTGATCCTACTCTGACTCTCAAGATAATGGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATAAGTCTGGGTATAAGCTaGCCACTAGGTCCTCTCATC +
Preference number: 2 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPISLGIS*PLGPLI
Trigger: GATGAGAGGACCTAGTGGTCAGCTTATACCCAGACT...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAATTTCCTCCGCTCCTGTaGTCCTCTTTCCCAAAAGAA +
Preference number: 2 (lower is better)
Translates to: FVGSCPKMSVPISISGWQFPPLL*SSFPKE
Trigger: TTCTTTTGGGAAAGAGGAGCACAGGAGCGGAGGAAA...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTATAGATGCAAAAGCATaGCGGGAGGAGTTATGGGTC +
Preference number: 2 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCIDAKA*REELWV
Trigger: GACCCATAACTCCTCCCGGCATGCTTTTGCATCTAT...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCAGGCAGTTTGTCCATTTaGCCAAAGTCATGCAGAATG +
Preference number: 2 (lower is better)
Translates to: NGDSNPGVTSKASVLVSAGSLSI*PKSCRM
Trigger: CATTCTGCATGACTTTGGGCAAATGGACAAACTGCC...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp TGTCAAAGTCCACCTGGCTCTGTCTGTCACATGGGTGATGAACAGGGTATGGGTTTGCCAATATTCTCTTaGAGGTATTCAAGGTCCCAT +
Preference number: 2 (lower is better)
Translates to: CQSPPGSVCHMGDEQGMGLPIFS*RYSRSH
Trigger: ATGGGACCTTGAATACCTGCAAGAGAATATTGGCAA...ACCCATACCCTGTTCATCACCCATGTGACAGACAGAGCCAGGTGGACTTTGACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR-3UTR CCA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCAGGAAAAGGTAAGCAGTaGAGAACCTTGGTAAGTAGG +
Preference number: 2 (lower is better)
Translates to: NGDSNPGVTSKASVLVSAGKGKQ*RTLVSR
Trigger: CCTACTTACCAAGGTTCTCCACTGCTTACCTTTTCC...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp AGCACCATTATCTTGAGAGTCAGAGTAGGATCAGAAAAGCCTTGCTGCTGTAGTACCTCATCTTTTCCTTaGGGGGAAGCAGCAGCTGAA +
Preference number: 2 (lower is better)
Translates to: STIILRVRVGSEKPCCCSTSSFP*GEAAAE
Trigger: TTCAGCTGCTGCTTCCCCCCAAGGAAAAGATGAGGT...ACTACAGCAGCAAGGCTTTTCTGATCCTACTCTGACTCTCAAGATAATGGTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATATTTGTAGGGGAAGCTaGTCTCCCCCAGGCATCCTG +
Preference number: 2 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYICRGS*SPPGIL
Trigger: CAGGATGCCTGGGGGAGACCAGCTTCCCCTACAAAT...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATAAGTACTTGTCACAGGTaGGCTATGAGGGGTGTTGAC +
Preference number: 2 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPISTCHR*AMRGVD
Trigger: GTCAACACCCCTCATAGCCCACCTGTGACAAGTACT...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTTCTGAGAGCACCACATaGGGACGAACTAATACAGTG +
Preference number: 2 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCSESTT*GRTNTV
Trigger: CACTGTATTAGTTCGTCCCCATGTGGTGCTCTCAGA...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 90 bp TGCCCCAGTCATCTCTTCTGTGATTTCACTTCAAGCACCATTATCTaGAGAGTCAGAGTAGGATCAGAAAAGCCTTGCTGCTGTAGTCTC +
Preference number: 2 (lower is better)
Translates to: CPSHLFCDFTSSTII*RVRVGSEKPCCCSL
Trigger: GAGACTACAGCAGCAAGGCTTTTCTGATCCTACTCTGACTCTCAAGATAATGGTGCTTGAAGTGAAATCACAGAAGAGATGACTGGGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGCTGAATAGATGTGAATaGTGGCCCTTCAAGTTGTGC +
Preference number: 2 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRLNRCE*WPFKLC
Trigger: GCACAACTTGAAGGGCCATCATTCACATCTATTCAG...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTCTATCTTTCCAAGTGTaGCTGTGGCCAAGTTTTTCC +
Preference number: 2 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVLSFQV*LWPSFS
Trigger: GGAAAAACTTGGCCACAGTCACACTTGGAAAGATAG...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGCTTATAGCTTGTACCTaGCACTCATCTATTTCTATC +
Preference number: 2 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMLIACT*HSSISI
Trigger: GATAGAAATAGATGAGTGTCAGGTACAAGCTATAAG...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATACCTCACGCCCTACAGTaGTGGAATGTAACAAGTACT +
Preference number: 2 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPIPHALQ*WNVTST
Trigger: AGTACTTGTTACATTCCAGCACTGTAGGGCGTGAGG...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTTTCTGAATTTTGATTaGCCTTCTCCCCTAGAACAA +
Preference number: 2 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMFLNFD*PSPLEQ
Trigger: TTGTTCTAGGGGAGAAGGGCAATCAAAATTCAGAAA...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp TCTGTCTGTCACATGGGTGATGAACAGGGTATGGGTAGAGGCACTCGAACTGATCCGGAGGGAATAAGATaGATCGTTTGTAACCTTTTA +
Preference number: 2 (lower is better)
Translates to: SVCHMGDEQGMGRGTRTDPEGIR*IVCNLL
Trigger: TAAAAGGTTACAAACGATGCATCTTATTCCCTCCGG...ATCAGTTCGAGTGCCTCTACCCATACCCTGTTCATCACCCATGTGACAGACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR-3UTR CCA 90 bp TTTTCCTCACGCCCTACAGTGCTGGAATGTAACAAGTACTTGTCACAGGTGGGCCTTATGCACAATCATTaGTTCTTATGTCCCAAGGTC +
Preference number: 2 (lower is better)
Translates to: FSSRPTVLECNKYLSQVGLMHNH*FLCPKV
Trigger: GACCTTGGGACATAAGAACCAATGATTGTGCATAAG...GCCCACCTGTGACAAGTACTTGTTACATTCCAGCACTGTAGGGCGTGAGGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTATCAACATAGTTTGGTaGAAAGGAAGGAGCAAGGGG +
Preference number: 2 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVINIVW*KGRSKG
Trigger: CCCCTTGCTCCTTCCTTTCCACCAAACTATGTTGAT...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTACGCAGCCCCATTTTTaGGAAGTTCCCATTCTGAAA +
Preference number: 2 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVTQPHF*EVPILK
Trigger: TTTCAGAATGGGAACTTCCCAAAAATGGGGCTGCGT...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGATACCGCCTAGAGCTTaGCTACGCAAAAACTGTCAG +
Preference number: 2 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQIPPRA*LRKNCQ
Trigger: CTGACAGTTTTTGCGTAGTCAAGCTCTAGGCGGTAT...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTTGTAATTTAGAGCTCTaGTTTGTAGGGGAAGCTGGT +
Preference number: 2 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVCNLEL*FVGEAG
Trigger: ACCAGCTTCCCCTACAAATCAGAGCTCTAAATTACA...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp CAGATGACTGAGATTGCAGAACAACCAGATATGTTGGTTGGGCCACTGACTAGAAGGATTAAACCAAGATaGCTGAAGACAAGCAGAAGG +
Preference number: 2 (lower is better)
Translates to: QMTEIAEQPDMLVGPLTRRIKPR*LKTSRR
Trigger: CCTTCTGCTTGTCTTCAGCCATCTTGGTTTAATCCT...TCTAGTCAGTGGCCCAACCAACATATCTGGTTGTTCTGCAATCTCAGTCATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGGGCAAGAGCTGGTGCTaGAAGAGAGAAACTATATGT +
Preference number: 2 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQGKSWC*KRETIC
Trigger: ACATATAGTTTCTCTCTTTCAGCACCAGCTCTTGCC...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTTCTTCACATCCACACTaGATCAGAGAACCCCAGAAT +
Preference number: 2 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSSSHPH*IREPQN
Trigger: ATTCTGGGGTTCTCTGATGCAGTGTGGATGTGAAGA...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATAAAGAAATACAAGCTCTaGCCACTTGTGGCAATACTG +
Preference number: 2 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPIKKYKL*PLVAIL
Trigger: CAGTATTGCCACAAGTGGGCAGAGCTTGTATTTCTT...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATGAAATGCCCTCAAAGTaGTCAGCAAGGCTCCATTCA +
Preference number: 2 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYEMPSK*SARLHS
Trigger: TGAATGGAGCCTTGCTGAGCACTTTGAGGGCATTTC...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATTGCAATACTAGCGCTTaGAGTCTCCTGTCCTCATCA +
Preference number: 2 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYCNTSA*SLLSSS
Trigger: TGATGAGGACAGGAGACTCCAAGCGCTAGTATTGCA...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGCTAAGCAGAAGCTCCTaGGATTTGATAAGGACCAGA +
Preference number: 2 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQLSRSS*DLIRTR
Trigger: TCTGGTCCTTATCAAATCCCAGGAGCTTCTGCTTAG...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 90 bp TACATGGAAAGGCATGGACTAAAATTGAATCAAGAGGGGCCTGATTaGACTGCTATTACATTTCATGGTGTGAGGAGACAACAGCTTCTC +
Preference number: 2 (lower is better)
Translates to: YMERHGLKLNQEGPD*TAITFHGVRRQQLL
Trigger: GAGAAGCTGTTGTCTCCTCACACCATGAAATGTAATAGCAGTCAAATCAGGCCCCTCTTGATTCAATTTTAGTCCATGCCTTTCCATGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 90 bp GGCAGATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATaGCACTATATATATTCAAGAGGTAATAAAAACCTGGCCCAAGCT +
Preference number: 2 (lower is better)
Translates to: GRSRYADSTLNHYTI*HYIYSRGNKNLAQA
Trigger: AGCTTGGGCCAGGTTTTTATTACCTCTTGAATATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATCTGCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATATTATTCATCTGTAAGTaGGAATACCTACCTTGCAGG +
Preference number: 2 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPILFICK*EYLPCR
Trigger: CCTGCAAGGTAGGTATTCTCACTTACAGATGAATAA...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGGTGTCTAATCACCAGTaGCAGAAACCATTACGCAAA +
Preference number: 2 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQVSNHQ*QKPLRK
Trigger: TTTGCGTAATGGTTTCTGTCACTGGTGATTAGACAC...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp AGCACCATTATCTTGAGAGTCAGAGTAGGATCAGAAAAGCCTTGCTGCTGTAGTTCTACTCCTGACATCTaGCTACGCAATATACTGTTT +
Preference number: 2 (lower is better)
Translates to: STIILRVRVGSEKPCCCSSTPDI*LRNILF
Trigger: AAACAGTATATTGCGTAGTCAGATGTCAGGAGTAGA...ACTACAGCAGCAAGGCTTTTCTGATCCTACTCTGACTCTCAAGATAATGGTGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR TCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTGAATCAAGAGGGGCCTaGTTTGACTGCTATTACATT +
Preference number: 2 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSESRGA*FDCYYI
Trigger: AATGTAATAGCAGTCAAATCAGGCCCCTCTTGATTC...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTATCTTTGTTGGCTCATaGCCAAAGATGTCTGTTCCT +
Preference number: 2 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSIFVGS*PKMSVP
Trigger: AGGAACAGACATCTTTGGGCATGAGCCAACAAAGAT...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR GCA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTGTATTTATAGAGAACTaGAGGGAGACTTGGCTTATA +
Preference number: 2 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCVFIEN*RETWLI
Trigger: TATAAGCCAAGTCTCCCTGCAGTTCTCTATAAATAC...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATTTTGGACTGCTGGACTaGAAGAAAGAGAAGCTAAGG +
Preference number: 2 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYFGLLD*KKEKLR
Trigger: CCTTAGCTTCTCTTTCTTCCAGTCCAGCAGTCCAAA...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp AGCACCATTATCTTGAGAGTCAGAGTAGGATCAGAAAAGCCTTGCTGCTGTAGTGAGGTAATAAAAACCTaGCCCAAGCTTAGCTTAGAT +
Preference number: 2 (lower is better)
Translates to: STIILRVRVGSEKPCCCSEVIKT*PKLSLD
Trigger: ATCTAAGCTAAGCTTGGGCCAGGTTTTTATTACCTC...ACTACAGCAGCAAGGCTTTTCTGATCCTACTCTGACTCTCAAGATAATGGTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATAATCCTCCCAGGTGTCTaGTCCATATTTGTAATTTTT +
Preference number: 2 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPIILPGV*SIFVIF
Trigger: AAAAATTACAAATATGGACCAGACACCTGGGAGGAT...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATAAAATCAACATAGTTTaGTGGAAAGGAAGGAGCAAG +
Preference number: 2 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYKINIV*WKGRSK
Trigger: CTTGCTCCTTCCTTTCCACCAAACTATGTTGATTTT...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 90 bp AATATGGTTTATCTAAGGTGTTTCTCGTTTTTCCCTATGCTTTTCTaGAGAGAGAAAGAACCACTGGAAATCTGTTTAGAGATCACTGAA +
Preference number: 2 (lower is better)
Translates to: NMVYLRCFSFFPMLF*REKEPLEICLEITE
Trigger: TTCAGTGATCTCTAAACAGATTTCCAGTGGTTCTTTCTCTCTCAAGAAAAGCATAGGGAAAAACGAGAAACACCTTAGATAAACCATATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 72 bp GCCAACTGCCCTGCCTCGCTCCAAACACCTGACTCCTaGGCCATGGCAAGAGTCCAGTCCATTAAGTGCAGC +
Preference number: 3 (lower is better)
Translates to: ANCPASLQTPDS*AMARVQSIKCS
Trigger: GCTGCACTTAATGGACTGGACTCTTGCCATGGCCCAGGAGTCAGGTGTTTGGAGCGAGGCAGGGCAGTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 72 bp GGTCAGACTAGCTCTGGCCCTGCAGCCCAGATGCAGTaGGGAGTCCAAGAGCATCTCATCTCTCTCTCAGGC +
Preference number: 3 (lower is better)
Translates to: GQTSSGPAAQMQ*GVQEHLISLSG
Trigger: GCCTGAGAGAGAGATGAGATGCTCTTGGACTCCCCACTGCATCTGGGCTGCAGGGCCAGAGCTAGTCTGACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 72 bp GCCCTCTCGGGGGAGCCCAGAGGCTTACAAGGAGCCTaGGTAGAGCTTTGCTCTCTACTGGTTTCCTCCTCT +
Preference number: 3 (lower is better)
Translates to: ALSGEPRGLQGA*VELCSLLVSSS
Trigger: AGAGGAGGAAACCAGTAGAGAGCAAAGCTCTACCCAGGCTCCTTGTAAGCCTCTGGGCTCCCCCGAGAGGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp ACACGCACGCACACACACACACACACCCAGAGGCTTGCACCCCTAGTGTGGATAGCTGAGGCACTGAGGTaGCAGGAGATAGGGCTGAGA +
Preference number: 3 (lower is better)
Translates to: TRTHTHTHTQRLAPLVWIAEALR*QEIGLR
Trigger: TCTCAGCCCTATCTCCTGCAACCTCAGTGCCTCAGC...TATCCACACTAGGGGTGCAAGCCTCTGGGTGTGTGTGTGTGTGTGCGTGCGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 72 bp GCCCTGCCTCGCTCCAAACACCTGACTCCTGGGCCATaGCAAGAGTCCAGTCCATTAAGTGCAGCGTGCAAT +
Preference number: 3 (lower is better)
Translates to: ALPRSKHLTPGP*QESSPLSAACN
Trigger: ATTGCACGCTGCACTTAATGGACTGGACTCTTGCCATGGCCCAGGAGTCAGGTGTTTGGAGCGAGGCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 72 bp CAGCCAGGAAGCTCAGCAGGAATAAAGGATATGGCCTaGGCAGGGAGCATCATAGGGCCTGGAGGCTCTAGC +
Preference number: 3 (lower is better)
Translates to: QPGSSAGIKDMA*AGSIIGPGGSS
Trigger: GCTAGAGCCTCCAGGCCCTATGATGCTCCCTGCCCAGGCCATATCCTTTATTCCTGCTGAGCTTCCTGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 72 bp TCAGAGCCCCTCCACACAGCCACAGCTGCACTGATGTaGGGTTGTGGGGACATCAACGTTGCTAGGAAGCGT +
Preference number: 3 (lower is better)
Translates to: SEPLHTATAALM*GCGDINVARKR
Trigger: ACGCTTCCTAGCAACGTTGATGTCCCCACAACCCCACATCAGTGCAGCTGTGGCTGTGTGGAGGGGCTCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 72 bp GGGAGCTCAGACCTGAAACCTTCTCACCCAAGGCCCTaGGCTGGTAGTACAGCAGTAAAGTCTGGCTGCCCA +
Preference number: 3 (lower is better)
Translates to: GSSDLKPSHPRP*AGSTAVKSGCP
Trigger: TGGGCAGCCAGACTTTACTGCTGTACTACCAGCCCAGGGCCTTGGGTGAGAAGGTTTCAGGTCTGAGCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp GACCACACGCCCCCAGGCCTCAAGACTTCCCGTTTCTaGGGTTGTGCCCAACAGAAATGCCCTCAAAGTGCT +
Preference number: 3 (lower is better)
Translates to: DHTPPGLKTSRF*GCAQQKCPQSA
Trigger: AGCACTTTGAGGGCATTTCTGTTGGGCACAACCTCAGAAACGGGAAGTCTTGAGGCCTGGGGGCGTGTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp GCTTTAAGACGCAAGCCTATGTGTTTGCCCGTGCCCTaGGGTGGATCACAGGTAGTGAATGAGCTGCCTGGG +
Preference number: 3 (lower is better)
Translates to: ALRRKPMCLPVP*GGSQVVNELPG
Trigger: CCCAGGCAGCTCATTCACTACCTGTGATCCACCTCAGGGCACGGGCAAACACATAGGCTTGCGTCTTAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp CACCACACTGCCCAATCCCAGGGACCCCACTCCCACTaGATAGATGTGAATGATGGCCCTTCAAGTTGTGCA +
Preference number: 3 (lower is better)
Translates to: HHTAQSQGPHSH*IDVNDGPSSCA
Trigger: TGCACAACTTGAAGGGCCATCATTCACATCTATTCAGTGGGAGTGGGGTCCCTGGGATTGGGCAGTGTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp ACTTCTAGGTATACCTCATCATCTACCCCATCTGGGTaGAACTGGTCCCTGAGGGTCATTCCCTGCAGCCCC +
Preference number: 3 (lower is better)
Translates to: TSRYTSSSTPSG*NWSLRVIPCSP
Trigger: GGGGCTGCAGGGAATGACCCTCAGGGACCAGTTTCACCCAGATGGGGTAGATGATGAGGTATACCTAGAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp ACACCCCCAAAGGCACCCAGCCTGTGCAAAGTCCACTaGCATTCTCACTTAGGTTCACTGGCCAGAAGCTTG +
Preference number: 3 (lower is better)
Translates to: TPPKAPSLCKVH*HSHLGSLARSL
Trigger: CAAGCTTCTGGCCAGTGAACCTAAGTGAGAATGTCAGTGGACTTTGCACAGGCTGGGTGCCTTTGGGGGTGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 72 bp GGGCCATGGCAAGAGTCCAGTCCATTAAGTGCAGCGTaGAATACTAGCGCTTGGAGTCTCCTGTCCTCATCA +
Preference number: 3 (lower is better)
Translates to: GPWQESSPLSAA*NTSAWSLLSSS
Trigger: TGATGAGGACAGGAGACTCCAAGCGCTAGTATTGCACGCTGCACTTAATGGACTGGACTCTTGCCATGGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 72 bp AGGAGACAGCTGAATAAGGGAAACTGCAGGCAGCTCTaGAGAGGGAGGCTGGAACATCCCTTTAGAGCCAAC +
Preference number: 3 (lower is better)
Translates to: RRQLNKGNCRQL*RGRLEHPFRAN
Trigger: GTTGGCTCTAAAGGGATGTTCCAGCCTCCCTCTCCAGAGCTGCCTGCAGTTTCCCTTATTCAGCTGTCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp CTGGCTCTGTCTGTCACATGGGTGATGAACAGGGTATGGGTAGAGGCACTCGAACTGCCCACAGTGTCATaGAGCGTTTGCTGCAGATAC +
Preference number: 3 (lower is better)
Translates to: LALSVTWVMNRVWVEALELPTVS*SVCCRY
Trigger: GTATCTGCAGCAAACGCTCAATGACACTGTGGGCAG...TTCGAGTGCCTCTACCCATACCCTGTTCATCACCCATGTGACAGACAGAGCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR TCA 72 bp ATTCGACTTCCATGCTCCACCAGTTGCCCTGACTATTaGGGGTGTTGTGGCACATTACAACGGGGTCTGGCA +
Preference number: 3 (lower is better)
Translates to: IRLPCSTSCPDY*GCCGTLQRGLA
Trigger: TGCCAGACCCCGTTGTAATGTGCCACAACACCCTCAATAGTCAGGGCAACTGGTGGAGCATGGAAGTCGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp ATCCCAGGGACCCCACTCCCACTGAATAGATGTGAATaGTGGCCCTTCAAGTTGTGCAATCACAGCTGCCCA +
Preference number: 3 (lower is better)
Translates to: IPGTPLPLNRCE*WPFKLCNHSCP
Trigger: TGGGCAGCTGTGATTGCACAACTTGAAGGGCCATCATTCACATCTATTCAGTGGGAGTGGGGTCCCTGGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp CACACGCATCCTCTCAGTTCATCAGTGCACTATAACTaGGCTTCAGGGGTGAGAGCCAGAGCTCAGATGCTG +
Preference number: 3 (lower is better)
Translates to: HTHPLSSSVHYN*ASGVRARAQML
Trigger: CAGCATCTGAGCTCTGGCTCTCACCCCTGAAGCTCAGTTATAGTGCACTGATGAACTGAGAGGATGCGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp GTCTGCCTTCAGATACTGCCCAGTGGGGTGATATCTTaGGGACAGAACCTGTGGTACAAGGAGGGAGGTAAG +
Preference number: 3 (lower is better)
Translates to: VCLQILPSGVIS*GQNLWYKEGGK
Trigger: CTTACCTCCCTCCTTGTACCACAGGTTCTGTCCTCAAGATATCACCCCACTGGGCAGTATCTGAAGGCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp CCAAGGCCCAGAGCCAGTTATCTAGAAGGAAAGACGTaGCTGCAAGGTGACTACAGAATGGCCTGTAGCCCA +
Preference number: 3 (lower is better)
Translates to: PRPRASYLEGKT*LQGDYRMACSP
Trigger: TGGGCTACAGGCCATTCTGTAGTCACCTTGCAGTCACGTCTTTCCTTCTAGATAACTGGCTCTGGGCCTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp TCCTTGTGCACATCCCAGGGTCTCCTTCTTGCCTTCTaGCTGTGCTGCTGGCTCATACAAACCTTCAATGCC +
Preference number: 3 (lower is better)
Translates to: SLCTSQGLLLAF*LCCWLIQTFNA
Trigger: GGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAGGCAAGAAGGAGACCCTGGGATGTGCACAAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 72 bp TCCTGCATCCTTGTGCACATCCCAGGGTCTCCTTCTTaGCTTCTGACTGTGCTGCTGGCTCATACAAACCTT +
Preference number: 3 (lower is better)
Translates to: SCILVHIPGSPS*LLTVLLAHTNL
Trigger: AAGGTTTGTATGAGCCAGCAGCACAGTCAGAAGGCAAGAAGGAGACCCTGGGATGTGCACAAGGATGCAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 72 bp CTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTaGAGAACCTTGGTAAGTAGGGAGGCTGGCCAGTGT +
Preference number: 3 (lower is better)
Translates to: LTLYCPTGKGKQ*RTLVSREAGQC
Trigger: ACACTGGCCAGCCTCCCTACTTACCAAGGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 72 bp GGGATTGTCAAAGTCCACCTGGCTCTGTCTGTCACATaGGTGATGAACAGGGTATGGGTAGAGGCACTCGAA +
Preference number: 3 (lower is better)
Translates to: GIVKVHLALSVT*VMNRVWVEALE
Trigger: TTCGAGTGCCTCTACCCATACCCTGTTCATCACCCATGTGACAGACAGAGCCAGGTGGACTTTGACAATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR-3UTR CAA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTGCTAGGAGAACTCCCTaGGTACCCAGCATAGGGGCA +
Preference number: 3 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVARRTP*VPSIGA
Trigger: TGCCCCTATGCTGGGTACCAAGGGAGTTCTCCTAGC...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGATGAGCTGCCTGGGCTaGACCCCATTTCATCTATTC +
Preference number: 3 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMMSCLG*TPFHLF
Trigger: GAATAGATGAAATGGGGTCAAGCCCAGGCAGCTCAT...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp CTGGCTCTGTCTGTCACATGGGTGATGAACAGGGTATGGGTAGAGGCACTCGAAAGTGTCATTGAGCGTTaGCTGCAGATACAACCTCTC +
Preference number: 3 (lower is better)
Translates to: LALSVTWVMNRVWVEALESVIER*LQIQPL
Trigger: GAGAGGTTGTATCTGCAGCAAACGCTCAATGACACT...TTCGAGTGCCTCTACCCATACCCTGTTCATCACCCATGTGACAGACAGAGCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR TCA 72 bp GTGGGCTGCTCCACACCTGAAGACTCATCCTATTACTaGACCTCAGCACTGTTTACACATCTGGCCTCAGAG +
Preference number: 3 (lower is better)
Translates to: VGCSTPEDSSYY*TSALFTHLASE
Trigger: CTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAGTCTTCAGGTGTGGAGCAGCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 72 bp GAGCCCAGAAGAACTTTCACCCTGAGCTGTATATTCTaGACCATCTTGGGCTGGGTCTGCCTTCAGATACTG +
Preference number: 3 (lower is better)
Translates to: EPRRTFTLSCIF*TILGWVCLQIL
Trigger: CAGTATCTGAAGGCAGACCCAGCCCAAGATGGTGCAGAATATACAGCTCAGGGTGAAAGTTCTTCTGGGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 72 bp TCCAGTCCATTAAGTGCAGCGTGCAATACTAGCGCTTaGAGTCTCCTGTCCTCATCAATGAAGCGGTGTGGA +
Preference number: 3 (lower is better)
Translates to: SSPLSAACNTSA*SLLSSSMKRCG
Trigger: TCCACACCGCTTCATTGATGAGGACAGGAGACTCCAAGCGCTAGTATTGCACGCTGCACTTAATGGACTGGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 72 bp CGGGCAGTTTGTCCATTTGCCCAAAGTCATGCAGAATaGCAGATCCAGGTATGCAGACTCCACTCTCAACCA +
Preference number: 3 (lower is better)
Translates to: RAVCPFAQSHAE*QIQVCRLHSQP
Trigger: TGGTTGAGAGTGGAGTCTGCATACCTGGATCTGCCATTCTGCATGACTTTGGGCAAATGGACAAACTGCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTAAGCAGTGGAGAACCTaGGTAAGTAGGGAGGCTGGC +
Preference number: 3 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCKQWRT*VSREAG
Trigger: GCCAGCCTCCCTACTTACCAAGGTTCTCCACTGCTT...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGATGGGACTCAAACTCTaGGAGGAGTGGAGAGATAGT +
Preference number: 3 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMMGLKL*EEWRDS
Trigger: ACTATCTCTCCACTCCTCCAAGAGTTTGAGTCCCAT...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGCAAGTTTCGGGCAGTTaGTCCATTTGCCCAAAGTCA +
Preference number: 3 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMQVSGS*SICPKS
Trigger: TGACTTTGGGCAAATGGACAAACTGCCCGAAACTTG...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp GAGGGAGGCTGGAACATCCCTTTAGAGCCAACAGTTTaGGAAGACATCAGAGAAGTATGCAGGCAGTGGAAG +
Preference number: 3 (lower is better)
Translates to: EGGWNIPLEPTV*EDIREVCRQWK
Trigger: CTTCCACTGCCTGCATACTTCTCTGATGTCTTCTCAAACTGTTGGCTCTAAAGGGATGTTCCAGCCTCCCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp AAGACAAGCAGAAGGGGCTACCACAGTGAGACAAGCTaGACCAGGATGTACAGAACTGACAATGGAAGGGCA +
Preference number: 3 (lower is better)
Translates to: KTSRRGYHSETS*TRMYRTDNGRA
Trigger: TGCCCTTCCATTGTCAGTTCTGTACATCCTGGTTCAGCTTGTCTCACTGTGGTAGCCCCTTCTGCTTGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 72 bp CAAGTTTCGGGCAGTTTGTCCATTTGCCCAAAGTCATaGAGAATGGCAGATCCAGGTATGCAGACTCCACTC +
Preference number: 3 (lower is better)
Translates to: QVSGSLSICPKS*RMADPGMQTPL
Trigger: GAGTGGAGTCTGCATACCTGGATCTGCCATTCTGCATGACTTTGGGCAAATGGACAAACTGCCCGAAACTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 72 bp CCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTaGATCACACAAACCCTTGTGAGAACAATGACCATG +
Preference number: 3 (lower is better)
Translates to: PRSHLQSLCSCQ*ITQTLVRTMTM
Trigger: CATGGTCATTGTTCTCACAAGGGTTTGTGTGATGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTAGCCTGGGTAGAGCTTaGCTCTCTACTGGTTTCCTC +
Preference number: 3 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVSLGRA*LSTGFL
Trigger: GAGGAAACCAGTAGAGAGCAAAGCTCTACCCAGGCT...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp AACTTTGACTTCTGGTCACAATTCCTAAGGTTCTCCTaGCAGAATGCTGGCCTCCTCACCCTTAGTTCAGGG +
Preference number: 3 (lower is better)
Translates to: NFDFWSQFLRFS*QNAGLLTLSSG
Trigger: CCCTGAACTAAGGGTGAGGAGGCCAGCATTCTGTCAGGAGAACCTTAGGAATTGTGACCAGAAGTCAAAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 72 bp CCTCTCTCAACAGTCCCTAATCTTGTCCACACAGGGTaGACGATATACAAGTGTGGCCTTATAACCTCTGGT +
Preference number: 3 (lower is better)
Translates to: PLSTVPNLVHTG*TIYKCGLITSG
Trigger: ACCAGAGGTTATAAGGCCACACTTGTATATCGTGCACCCTGTGTGGACAAGATTAGGGACTGTTGAGAGAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 72 bp GTGCAATGCTTCTCCTCTATACACCATAATTCTAACTaGCTGCCTGTCTCCCCTACTGATCTGAGAGCACCA +
Preference number: 3 (lower is better)
Translates to: VQCFSSIHHNSN*LPVSPTDLRAP
Trigger: TGGTGCTCTCAGATCAGTAGGGGAGACAGGCAGGCAGTTAGAATTATGGTGTATAGAGGAGAAGCATTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAAACATCACCCACATCTTaGAGCGCTGAGCGAGGAATA +
Preference number: 3 (lower is better)
Translates to: FVGSCPKMSVPISISGWQTSPTS*SAERGI
Trigger: TATTCCTCGCTCAGCGCTCAAAGATGTGGGTGATGT...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp TTTTCCTCACGCCCTACAGTGCTGGAATGTAACAAGTACTTGTCACAGGTGGGCAGTTTTTCCAAGACTTaGTTAGCAGGAGCCCAGAAG +
Preference number: 3 (lower is better)
Translates to: FSSRPTVLECNKYLSQVGSFSKT*LAGAQK
Trigger: CTTCTGGGCTCCTGCTAACAAAGTCTTGGAAAAACT...GCCCACCTGTGACAAGTACTTGTTACATTCCAGCACTGTAGGGCGTGAGGAAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCAGAAGCTCCTGGGATTaGATAAGGACCAGATTTTCC +
Preference number: 3 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLRSSWD*IRTRFS
Trigger: GGAAAATCTGGTCCTTATCAAATCCCAGGAGCTTCT...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTCGCATTCCTTCATCCTaGGATCCTCTAAGGCACTCA +
Preference number: 3 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCRIPSS*DPLRHS
Trigger: TGAGTGCCTTAGAGGATCCAAGGATGAAGGAATGCG...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGCAAGAGGGGCCTGATTaGACTGCTATTACATTTCAT +
Preference number: 3 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMQEGPD*TAITFH
Trigger: ATGAAATGTAATAGCAGTCAAATCAGGCCCCTCTTG...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCACAAAGGGTTTTCTTCTaGGGATCTACTGTCTCACCC +
Preference number: 3 (lower is better)
Translates to: NGDSNPGVTSKASVLVSAQRVFF*GSTVSP
Trigger: GGGTGAGACAGTAGATCCCAAGAAGAAAACCCTTTG...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCAGGGCAGTTTGTCCATTaGCCCAAAGTCATGCAGAAT +
Preference number: 3 (lower is better)
Translates to: NGDSNPGVTSKASVLVSAGQFVH*PKVMQN
Trigger: ATTCTGCATGACTTTGGGCAAATGGACAAACTGCCC...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp CAGATGACTGAGATTGCAGAACAACCAGATATGTTGGTTGGGCCACTGACTAGATGTCCTTTTATCTCCTaGGGGAGCAGCAGCTCCAAT +
Preference number: 3 (lower is better)
Translates to: QMTEIAEQPDMLVGPLTRCPFIS*GSSSSN
Trigger: ATTGGAGCTGCTGCTCCCCAAGGAGATAAAAGGACA...TCTAGTCAGTGGCCCAACCAACATATCTGGTTGTTCTGCAATCTCAGTCATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp ATTGTCAAAGTCCACCTGGCTCTGTCTGTCACATGGGTGATGAACAGGGTATGGTTCATTTCTTCCCTGTaGGACCTCGGCTTAAAGTTC +
Preference number: 3 (lower is better)
Translates to: IVKVHLALSVTWVMNRVWFISSL*DLGLKF
Trigger: GAACTTTAAGCCGAGGTCCAACAGGGAAGAAATGAA...CCATACCCTGTTCATCACCCATGTGACAGACAGAGCCAGGTGGACTTTGACAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR-3UTR CAA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTTGAAAGAGCTACACTaGAGAAGGTACCATATCTTC +
Preference number: 3 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMLKELH*RRYHIF
Trigger: GAAGATATGGTACCTTCTCAAGTGTAGCTCTTTCAA...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCAATTCTGTACCAGATTTaGAAGGGTGGAAGACCCAGA +
Preference number: 3 (lower is better)
Translates to: NGDSNPGVTSKASVLVSAILYQI*KGGRPR
Trigger: TCTGGGTCTTCCACCCTTCAAAATCTGGTACAGAAT...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGTTAGGAAAAAGGGTCTaGGTAAGGAGGCCGCTGGAG +
Preference number: 3 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQLGKRV*VRRPLE
Trigger: CTCCAGCGGCCTCCTTACCAAGACCCTTTTTCCTAA...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCAAGGCATGGACTAAAATaGAATCAAGAGGGGCCTGAT +
Preference number: 3 (lower is better)
Translates to: NGDSNPGVTSKASVLVSARHGLK*NQEGPD
Trigger: ATCAGGCCCCTCTTGATTCAATTTTAGTCCATGCCT...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 72 bp TGTGGGTGCTGGCACTGTACACAGAGAAGTCTCCATTaGCAATATTCTCTTGCAGGTATTCAAGGTCCCATT +
Preference number: 3 (lower is better)
Translates to: CGCWHCTQRSLH*QYSLAGIQGPI
Trigger: AATGGGACCTTGAATACCTGCAAGAGAATATTGGCAATGGAGACTTCTCTGTGTACAGTGCCAGCACCCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR CCA 72 bp ACAAAACCCTTAGGCATTGGGAAGCAGTGTTTGTTTTaGACTGCTGGACTGGAAGAAAGAGAAGCTAAGGGG +
Preference number: 3 (lower is better)
Translates to: TKPLGIGKQCLF*TAGLEEREAKG
Trigger: CCCCTTAGCTTCTCTTTCTTCCAGTCCAGCAGTCCAAAACAAACACTGCTTCCCAATGCCTAAGGGTTTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp AAGCAAGTCCAATCTACGTCCACTCCAGGACAAATCTaGGCCAGCAACCAAGACTTTCAGATTTCTGTGACT +
Preference number: 3 (lower is better)
Translates to: KQVQSTSTPGQI*ASNQDFQISVT
Trigger: AGTCACAGAAATCTGAAAGTCTTGGTTGCTGGCTCAGATTTGTCCTGGAGTGGACGTAGATTGGACTTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 72 bp GATCTGAGAGCACCACATGGGGACGAACTAATACAGTaGCTGGAACAGAAGTGTTCAACAAATGGTAGCTAT +
Preference number: 3 (lower is better)
Translates to: DLRAPHGDELIQ*LEQKCSTNGSY
Trigger: ATAGCTACCATTTGTTGAACACTTCTGTTCCAGGCACTGTATTAGTTCGTCCCCATGTGGTGCTCTCAGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 72 bp TTTGCCCAAAGTCATGCAGAATGGCAGATCCAGGTATaGAGACTCCACTCTCAACCACTACACTATATTGCA +
Preference number: 3 (lower is better)
Translates to: FAQSHAEWQIQV*RLHSQPLHYIA
Trigger: TGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATCTGCCATTCTGCATGACTTTGGGCAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 72 bp CTGTACACAGAGAAGTCTCCATTGCCAATATTCTCTTaGAGGTATTCAAGGTCCCATTTCAGGGCAGGATAC +
Preference number: 3 (lower is better)
Translates to: LYTEKSPLPIFS*RYSRSHFRAGY
Trigger: GTATCCTGCCCTGAAATGGGACCTTGAATACCTGCAAGAGAATATTGGCAATGGAGACTTCTCTGTGTACAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR GCA 72 bp CCATCTTCTTCTCATCATAGTACAAGAACTTGTGGGTaGTGGCACTGTACACAGAGAAGTCTCCATTGCCAA +
Preference number: 3 (lower is better)
Translates to: PSSSHHSTRTCG*WHCTQRSLHCQ
Trigger: TTGGCAATGGAGACTTCTCTGTGTACAGTGCCAGCACCCACAAGTTCTTGTACTATGATGAGAAGAAGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR GCA 72 bp TTAGAGGTAAGCTGCCCCCAGCCACGCTTTCCCTGTTaGTTATTAATCCAGTTCCAGTTAAAACCTAAGAAG +
Preference number: 3 (lower is better)
Translates to: LEVSCPQPRFPC*LLIQFQLKPKK
Trigger: CTTCTTAGGTTTTAACTGGAACTGGATTAATAAGCAACAGGGAAAGCGTGGCTGGGGGCAGCTTACCTCTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR-3UTR CAA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATACCATTTATTAAGTGCTaGCCAGGCACTGTGCTAAAG +
Preference number: 3 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPIPFIKC*PGTVLK
Trigger: CTTTAGCACAGTGCCTGGCAAGCACTTAATAAATGG...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp AGACAAGTCTATTCACACTTGCAGCCATGGAGTTTCTaGGGGAAGGACAACTGTTTAGGAAAAAGGGTCTTG +
Preference number: 3 (lower is better)
Translates to: RQVYSHLQPWSF*GKDNCLGKRVL
Trigger: CAAGACCCTTTTTCCTAAACAGTTGTCCTTCCCTCAGAAACTCCATGGCTGCAAGTGTGAATAGACTTGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp ACTTACCTAAGGTTAGAATTAGCTAGTGGCAAATGGTaGTTCAAACCCAGGAGTCACCTCCAAAGCCTCTGT +
Preference number: 3 (lower is better)
Translates to: TYLRLELASGKW*FKPRSHLQSLC
Trigger: ACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATTTGCCACTAGCTAATTCTAACCTTAGGTAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp CTTCCCCATTCACACTCATGCTCCCTCTTACAGAACTaGTCTCTCCTCAGAAAAGGGAAATCTGATGTTACT +
Preference number: 3 (lower is better)
Translates to: LPHSHSCSLLQN*SLLRKGKSDVT
Trigger: AGTAACATCAGATTTCCCTTTTCTGAGGAGAGATCAGTTCTGTAAGAGGGAGCATGAGTGTGAATGGGGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp ACGGCTGCTAGTTACGTGGTACTTGTAGAGGCTAAGTaGCTTGGGTGTGTGGTAATATTACATTTAGAACCC +
Preference number: 3 (lower is better)
Translates to: TAASYVVLVEAK*LGCVVILHLEP
Trigger: GGGTTCTAAATGTAATATTACCACACACCCAAGTCACTTAGCCTCTACAAGTACCACGTAACTAGCAGCCGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp CGCTGCTGTATATCCTGCAGTTTCTCAACGAACTCATaGAATTTCATTTCTTCCCTGTTGGACCTCGGCTTA +
Preference number: 3 (lower is better)
Translates to: RCCISCSFSTNS*NFISSLLDLGL
Trigger: TAAGCCGAGGTCCAACAGGGAAGAAATGAAATTTCATGAGTTCGTTGAGAAACTGCAGGATATACAGCAGCG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR CCA 72 bp ATCATTGGTTCTTATGTCCCAAGGTCCTTTTATGTATaGCTTGAGCTTGTAGGCCCAGTTGGAACCCTATCT +
Preference number: 3 (lower is better)
Translates to: IIGSYVPRSFYV*LELVGPVGTLS
Trigger: AGATAGGGTTCCAACTGGGCCTACAAGCTCAAGCCATACATAAAAGGACCTTGGGACATAAGAACCAATGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTGAAAATCAACATAGTTaGGTGGAAAGGAAGGAGCAA +
Preference number: 3 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCENQHS*VERKEQ
Trigger: TTGCTCCTTCCTTTCCACCAAACTATGTTGATTTTC...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATACTTCCACATATCAGCTaGGACTTATCACTTTCTGCA +
Preference number: 3 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPILPHIS*DLSLSA
Trigger: TGCAGAAAGTGATAAGTCCAAGCTGATATGTGGAAG...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR-3UTR CAA 90 bp ATTTCTTCCCTGTTGGACCTCGGCTTAAAGTTCTGGAAATTGGCCATCTTCTTCATTGCCAATATTCTCTaGCAGGTATTCAAGGTCCCA +
Preference number: 3 (lower is better)
Translates to: ISSLLDLGLKFWKLAIFFIANIL*QVFKVP
Trigger: TGGGACCTTGAATACCTGCAAGAGAATATTGGCAAT...GAAGAAGATGGCCAATTTCCAGAACTTTAAGCCGAGGTCCAACAGGGAAGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR TCA 72 bp AGGGCCTTTCTCATTAAGATCTCTACTCCTGACATCTaGCTACGCAATATACTGTTTCCCTTTCAGCAACCA +
Preference number: 3 (lower is better)
Translates to: RAFLIKISTPDI*LRNILFPFQQP
Trigger: TGGTTGCTGAAAGGGAAACAGTATATTGCGTAGTCAGATGTCAGGAGTAGAGATCTTAATGAGAAAGGCCCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp ACTGCATGTATTTTGGAGGTTATCTTCTCAGATGACTaGGATTGCAGAACAACCAGATATGTTGGTTGGGCC +
Preference number: 3 (lower is better)
Translates to: TACILEVIFSDD*DCRTTRYVGWA
Trigger: GGCCCAACCAACATATCTGGTTGTTCTGCAATCTCAGTCATCTGAGAAGATAACCTCCAAAATACATGCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 72 bp TTATCACGAGCCCTTATAACAATGCTACAAGTTATGTaGTATTTCCTACCCCTCACAGAGGAAGAGGTTGAG +
Preference number: 3 (lower is better)
Translates to: LSRALITMLQVM*YFLPLTEEEVE
Trigger: CTCAACCTCTTCCTCTGTGAGGGGTAGGAAATAGCACATAACTTGTAGCATTGTTATAAGGGCTCGTGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 72 bp AAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTaGTTAATTATTCATCTTCCACATATCAGCTTGGAC +
Preference number: 3 (lower is better)
Translates to: KKEKLRGKSPNL*LIIHLPHISLD
Trigger: GTCCAAGCTGATATGTGGAAGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 72 bp TCTTCTTCTCATCATAGTACAAGAACTTGTGGGTGCTaGCACTGTACACAGAGAAGTCTCCATTGCCAATAT +
Preference number: 3 (lower is better)
Translates to: SSSHHSTRTCGC*HCTQRSLHCQY
Trigger: ATATTGGCAATGGAGACTTCTCTGTGTACAGTGCCAGCACCCACAAGTTCTTGTACTATGATGAGAAGAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR-3UTR CAA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATAACTTATGCACAATCATaGGTTCTTATGTCCCAAGGT +
Preference number: 3 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPITYAQS*VLMSQG
Trigger: ACCTTGGGACATAAGAACCAATGATTGTGCATAAGT...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp GCTTTACAAACATTGTTTCAGTTATTCCAACAACCCTaGGGTAGATATTTTCAACATGCCTCCCTCCACCCA +
Preference number: 3 (lower is better)
Translates to: ALQTLFQLFQQP*GRYFQHASLHP
Trigger: TGGGTGGAGGGAGGCATGTTGAAAATATCTACCTCAGGGTTGTTGGAATAACTGAAACAATGTTTGTAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 72 bp CTACAGTGCTGGAATGTAACAAGTACTTGTCACAGGTaGGCTATGAGGGGTGTTGACTATTACAAAAACATT +
Preference number: 3 (lower is better)
Translates to: LQCWNVTSTCHR*AMRGVDYYKNI
Trigger: AATGTTTTTGTAATAGTCAACACCCCTCATAGCCCACCTGTGACAAGTACTTGTTACATTCCAGCACTGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp CTTACAGAACTGATCTCTCCTCAGAAAAGGGAAATCTaGTGTTACTTGTTCACACTAAGACATGCACAGTTG +
Preference number: 3 (lower is better)
Translates to: LTELISPQKREI*CYLFTLRHAQL
Trigger: CAACTGTGCATGTCTTAGTGTGAACAAGTAACATCAGATTTCCCTTTTCTGAGGAGAGATCAGTTCTGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 72 bp AGCTTGTACCTGACACTCATCTATTTCTATCTTTGTTaGCTCATGCCCAAAGATGTCTGTTCCTATATCCAT +
Preference number: 3 (lower is better)
Translates to: SLYLTLIYFYLC*LMPKDVCSYIH
Trigger: ATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAAGATAGAAATAGATGAGTGTCAGGTACAAGCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR TCA 72 bp TTTTCCACTGTTATTCTTTGCCTTATAGCTTGTACCTaGCACTCATCTATTTCTATCTTTGTTGGCTCATGC +
Preference number: 3 (lower is better)
Translates to: FSTVILCLIACT*HSSISIFVGSC
Trigger: GCATGAGCCAACAAAGATAGAAATAGATGAGTGTCAGGTACAAGCTATAAGGCAAAGAATAACAGTGGAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR GCA 72 bp GTTGGCATTACAAAGCAAACCTGTTACTCTCACAAATaGTCTTCCATATGTCAAGGACTTAAAATACAAACT +
Preference number: 3 (lower is better)
Translates to: VGITKQTCYSHK*SSICQGLKIQT
Trigger: AGTTTGTATTTTAAGTCCTTGACATATGGAAGAGCATTTGTGAGAGTAACAGGTTTGCTTTGTAATGCCAAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CCA 72 bp AAACTGCATAGATCCTTACAGCAAATAGTAATGATGTaGGGGTTTGATGTTTTTAAACACACCTGTTCTTCA +
Preference number: 3 (lower is better)
Translates to: KLHRSLQQIVMM*GFDVFKHTCSS
Trigger: TGAAGAACAGGTGTGTTTAAAAACATCAAACCCCCACATCATTACTATTTGCTGTAAGGATCTATGCAGTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AAGCTTAGGATAGGTCAGGCAGTACTTCCCGGGGGCTCACACTGTACTGTCCCAGCCCGGGGGTCGCTCTaGCTCAGACGCGGAATGGGC +
Preference number: 4 (lower is better)
Translates to: KLRIGQAVLPGGSHCTVPARGSL*LRRGMG
Trigger: GCCCATTCCGCGTCTGAGTCAGAGCGACCCCCGGGC...TGGGACAGTACAGTGTGAGCCCCCGGGAAGTACTGCCTGACCTATCCTAAGCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp TCCCGGGGGCTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCTGCCCACCTGTAAGCTaGAGCCCTGAGAGGGGTTCC +
Preference number: 4 (lower is better)
Translates to: SRGLTLYCPTGKGKQWRTCPPVS*SPERGS
Trigger: GGAACCCCTCTCAGGGCTGCAGCTTACAGGTGGGCA...GGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAGCCCCCGGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp TCCCGGGGGCTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCGAGTGGAGTGCCAACTaGCCTGCCTCGCTCCAAACA +
Preference number: 4 (lower is better)
Translates to: SRGLTLYCPTGKGKQWRTEWSAN*PASLQT
Trigger: TGTTTGGAGCGAGGCAGGGCAGTTGGCACTCCACTC...GGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAGCCCCCGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp TCCCGGGGGCTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCCTCCTCAGCAATCCCTaGACCTCTCCCCTCAACTGG +
Preference number: 4 (lower is better)
Translates to: SRGLTLYCPTGKGKQWRTLLSNP*TSPLNW
Trigger: CCAGTTGAGGGGAGAGGTGCAGGGATTGCTGAGGAG...GGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAGCCCCCGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp ACACGCACGCACACACACACACACACCCAGAGGCTTGCACCCCTAGTGTGGATATGCACCACACCCCCATaGCAACGATTCCCAGAGGTC +
Preference number: 4 (lower is better)
Translates to: TRTHTHTHTQRLAPLVWICTTPP*QRFPEV
Trigger: GACCTCTGGGAATCGTTGGCATGGGGGTGTGGTGCA...TATCCACACTAGGGGTGCAAGCCTCTGGGTGTGTGTGTGTGTGTGCGTGCGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp TCCCGGGGGCTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCCAAACACCTGACTCCTaGGCCATGGCAAGAGTCCAG +
Preference number: 4 (lower is better)
Translates to: SRGLTLYCPTGKGKQWRTQTPDS*AMARVQ
Trigger: CTGGACTCTTGCCATGGCCCAGGAGTCAGGTGTTTG...GGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAGCCCCCGGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AAGCTTAGGATAGGTCAGGCAGTACTTCCCGGGGGCTCACACTGTACTGTCCCAGGAGGCTGGCCAGTGTaGACACACACACACACACAC +
Preference number: 4 (lower is better)
Translates to: KLRIGQAVLPGGSHCTVPGGWPV*THTHTH
Trigger: GTGTGTGTGTGTGTGTGTCCACACTGGCCAGCCTCC...TGGGACAGTACAGTGTGAGCCCCCGGGAAGTACTGCCTGACCTATCCTAAGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp TCTGGCAGAGGAGCTGGCTTTAAGACGCAAGCCTATGTGTTTGCCCGTGCCCTGATGTCTGTGGCCGACTaGACTAGCGGTGGCCATCTT +
Preference number: 4 (lower is better)
Translates to: SGRGAGFKTQAYVFARALMSVAD*TSGGHL
Trigger: AAGATGGCCACCGCTAGTCCAGTCGGCCACAGACAT...CAGGGCACGGGCAAACACATAGGCTTGCGTCTTAAAGCCAGCTCCTCTGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 72 bp CACGCCCCCAGGCCTCAAGACTTCCCGTTTCTGAGGTaGTGCCCAACAGAAATGCCCTCAAAGTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: HAPRPQDFPFLR*CPTEMPSKCSA
Trigger: TGCTGAGCACTTTGAGGGCATTTCTGTTGGGCACAACCTCAGAAACGGGAAGTCTTGAGGCCTGGGGGCGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AAGCTTAGGATAGGTCAGGCAGTACTTCCCGGGGGCTCACACTGTACTGTCCCAATCTCTCTCTCAGGCTaGGGCACTGAGGTTGCAGGA +
Preference number: 4 (lower is better)
Translates to: KLRIGQAVLPGGSHCTVPISLSG*GTEVAG
Trigger: TCCTGCAACCTCAGTGCCTCAGCCTGAGAGAGAGAT...TGGGACAGTACAGTGTGAGCCCCCGGGAAGTACTGCCTGACCTATCCTAAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCATCTACCCCATCTGGGTaGAACTGGTCCCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPSTPSG*NWSLRV
Trigger: GACCCTCAGGGACCAGTTTCACCCAGATGGGGTAGA...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAACTCTGGAGGCCTCACTaGCCACACGCCCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: FVGSCPKMSVPISISGWQLWRPH*PHAPRP
Trigger: AGGCCTGGGGGCGTGTGGTCAGTGAGGCCTCCAGAG...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp AAGCTTAGGATAGGTCAGGCAGTACTTCCCGGGGGCTCACACTGTACTGTCCCAGCAAGCCTATGTGTTTaGCCGTGCCCTGAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: KLRIGQAVLPGGSHCTVPASLCV*PCPEVD
Trigger: ATCCACCTCAGGGCACGGGCAAACACATAGGCTTGC...TGGGACAGTACAGTGTGAGCCCCCGGGAAGTACTGCCTGACCTATCCTAAGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 72 bp GCTGACCTCTATACAGGCCCAAACCCCCACCTTCACTaGCTGTATGTGTGTGTCCCACACTGCCAGCTAGGA +
Preference number: 4 (lower is better)
Translates to: ADLYTGPNPHLH*LYVCVPHCQLG
Trigger: TCCTAGCTGGCAGTGTGGGACACACACATACAGCAAGTGAAGGTGGGGGTTTGGGCCTGTATAGAGGTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TCTGGCAGAGGAGCTGGCTTTAAGACGCAAGCCTATGTGTTTGCCCGTGCCCTGTGCCCACAGTGTCATTaGGCGTTTGCTGCAGATACA +
Preference number: 4 (lower is better)
Translates to: SGRGAGFKTQAYVFARALCPQCH*AFAADT
Trigger: TGTATCTGCAGCAAACGCTCAATGACACTGTGGGCA...CAGGGCACGGGCAAACACATAGGCTTGCGTCTTAAAGCCAGCTCCTCTGCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTCCGGAAGTGACAGCCTaGCCCAGAAGGAACAGGGAA +
Preference number: 4 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTPEVTA*PRRNRE
Trigger: TTCCCTGTTCCTTCTGGGTCAGGCTGTCACTTCCGG...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCAGAGACGGCCCTAAGATaGTCAGGGATGACCAGAGAG +
Preference number: 4 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPETALR*SGMTRE
Trigger: CTCTCTGGTCATCCCTGATCATCTTAGGGCCGTCTC...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCAACACACCCAGAGGCTTaGACCCCTAGTGTGGATACG +
Preference number: 4 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPTHPEA*TPSVDT
Trigger: CGTATCCACACTAGGGGTGCAAGCCTCTGGGTGTGT...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCACTATGTGTTTGCCCGTaGCCTGAGGTGGATCACAGG +
Preference number: 4 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPLCVCP*PEVDHR
Trigger: CCTGTGATCCACCTCAGGGCACGGGCAAACACATAG...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCACCAGGGTCTCCTTCTTaGCTTCTGACTGTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPPGSPS*LLTVLL
Trigger: CAGCAGCACAGTCAGAAGGCAAGAAGGAGACCCTGG...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 72 bp CTAGAACCTAGAGAAGCCACAGCTAGGAGAACTCCCTaGGTACCCAGCATAGGGGCAAGAGCTGGTGCTGAA +
Preference number: 4 (lower is better)
Translates to: LEPREATARRTP*VPSIGARAGAE
Trigger: TTCAGCACCAGCTCTTGCCCCTATGCTGGGTACCAAGGGAGTTCTCCTAGCTGTGGCTTCTCTAGGTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTCTCCACCAGTTGCCCTaGCTATTGAGGGTGTTGTGG +
Preference number: 4 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTLHQLP*LLRVLW
Trigger: CCACAACACCCTCAATAGTCAGGGCAACTGGTGGAG...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TTTTCCTCACGCCCTACAGTGCTGGAATGTAACAAGTACTTGTCACAGGTGGGCACTGAGCTTCAGGGGTaGGAGCCAGAGCTCAGATGC +
Preference number: 4 (lower is better)
Translates to: FSSRPTVLECNKYLSQVGTELQG*EPELRC
Trigger: GCATCTGAGCTCTGGCTCTCACCCCTGAAGCTCAGT...GCCCACCTGTGACAAGTACTTGTTACATTCCAGCACTGTAGGGCGTGAGGAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCAGGTGAAACTGGTCCCTaGGGGTCATTCCCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: NGDSNPGVTSKASVLVSAGETGP*GSFPAA
Trigger: GGCTGCAGGGAATGACCCTCAGGGACCAGTTTCACC...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TCCCGGGGGCTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCCAGGATGTACAGAACTaGCAATGGAAGGGCAAGAAC +
Preference number: 4 (lower is better)
Translates to: SRGLTLYCPTGKGKQWRTQDVQN*QWKGKN
Trigger: GTTCTTGCCCTTCCATTGTCAGTTCTGTACATCCTG...GGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAGCCCCCGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCCTCAATAAGCTCCTCTaGCCGGGGGTCGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLLNKLL*PGVALT
Trigger: AGTCAGAGCGACCCCCGGGCAGAGGAGCTTATTGAG...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp GTTAGAGGTAAGCTGCCCCCAGCCACGCTTTCCCTGTTGCTTATTAATCCAGTTAGGTTAGAGGTAAGCTaGCCCCAGCCACGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: VRGKLPPATLSLLLINPVRLEVS*PQPRFP
Trigger: GGGAAAGCGTGGCTGGGGGCAGCTTACCTCTAACCT...AACTGGATTAATAAGCAACAGGGAAAGCGTGGCTGGGGGCAGCTTACCTCTAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR GCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTGCCCTGCAGCCCAGATaGAGTGGGGAGTCCAAGAGC +
Preference number: 4 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVALQPR*SGESKS
Trigger: GCTCTTGGACTCCCCACTGCATCTGGGCTGCAGGGC...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp ACACGCACGCACACACACACACACACCCAGAGGCTTGCACCCCTAGTGTGGATAATAGATGCAAAAGCATaGCGGGAGGAGTTATGGGTC +
Preference number: 4 (lower is better)
Translates to: TRTHTHTHTQRLAPLVWIIDAKA*REELWV
Trigger: GACCCATAACTCCTCCCGGCATGCTTTTGCATCTAT...TATCCACACTAGGGGTGCAAGCCTCTGGGTGTGTGTGTGTGTGTGCGTGCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp TCCCGGGGGCTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCTGTGCCCAACAGAAATaGCCTCAAAGTGCTCAGCAA +
Preference number: 4 (lower is better)
Translates to: SRGLTLYCPTGKGKQWRTCAQQK*PQSAQQ
Trigger: TTGCTGAGCACTTTGAGGGCATTTCTGTTGGGCACA...GGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAGCCCCCGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCATCACCCAGGCTGGAGTaGAATGACGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPSPRLE*NDVISA
Trigger: AGCTGAGATCACGTCATTGCACTCCAGCCTGGGTGA...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp AAGCTTAGGATAGGTCAGGCAGTACTTCCCGGGGGCTCACACTGTACTGTCCCAGAAAGACTGAGCCCTTaGTATGGACCGGTCATTCTG +
Preference number: 4 (lower is better)
Translates to: KLRIGQAVLPGGSHCTVPERLSP*YGPVIL
Trigger: CAGAATGACCGGTCCATAGCAAGGGCTCAGTCTTTC...TGGGACAGTACAGTGTGAGCCCCCGGGAAGTACTGCCTGACCTATCCTAAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTAGTGTCTCCCCATACTaGGCTGGCCCACTGATAAGG +
Preference number: 4 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTSVSPY*AGPLIR
Trigger: CCTTATCAGTGGGCCAGCCCAGTATGGGGAGACACT...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AAGCTTAGGATAGGTCAGGCAGTACTTCCCGGGGGCTCACACTGTACTGTCCCAGGCTTACAAGGAGCCTaGGTAGAGCTTTGCTCTCTA +
Preference number: 4 (lower is better)
Translates to: KLRIGQAVLPGGSHCTVPGLQGA*VELCSL
Trigger: TAGAGAGCAAAGCTCTACCCAGGCTCCTTGTAAGCC...TGGGACAGTACAGTGTGAGCCCCCGGGAAGTACTGCCTGACCTATCCTAAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AAGCTTAGGATAGGTCAGGCAGTACTTCCCGGGGGCTCACACTGTACTGTCCCAGTCCTTTTATCTCCTTaGGGAGCAGCAGCTCCAATG +
Preference number: 4 (lower is better)
Translates to: KLRIGQAVLPGGSHCTVPVLLSP*GAAAPM
Trigger: CATTGGAGCTGCTGCTCCCCAAGGAGATAAAAGGAC...TGGGACAGTACAGTGTGAGCCCCCGGGAAGTACTGCCTGACCTATCCTAAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp TACAAGAACTTGTGGGTGCTGGCACTGTACACAGAGAAGTCTCCATTGCCAATACAGCACCACAGGCTCTaGGATTCATCCCAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: YKNLWVLALYTEKSPLPIQHHRL*DSSQAG
Trigger: CCCCGCCTGGGATGAATCCCAGAGCCTGTGGTGCTG...TATTGGCAATGGAGACTTCTCTGTGTACAGTGCCAGCACCCACAAGTTCTTGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
3UTR CAA 72 bp TACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCTaGGTAAGTAGGGAGGCTGGCCAGTGTGGACACACA +
Preference number: 4 (lower is better)
Translates to: YCPTGKGKQWRT*VSREAGQCGHT
Trigger: TGTGTGTCCACACTGGCCAGCCTCCCTACTTACCAAGGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 72 bp AGAACTTTCACCCTGAGCTGTATATTCTGCACCATCTaGGGCTGGGTCTGCCTTCAGATACTGCCCAGTGGG +
Preference number: 4 (lower is better)
Translates to: RTFTLSCIFCTI*GWVCLQILPSG
Trigger: CCCACTGGGCAGTATCTGAAGGCAGACCCAGCCCAAGATGGTGCAGAATATACAGCTCAGGGTGAAAGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 72 bp CATGACAATCTTCCTGCCCACAGTGTCATTGAGCGTTaGCTGCAGATACAACCTCTCTTCCCCTCCTCGCTG +
Preference number: 4 (lower is better)
Translates to: HDNLPAHSVIER*LQIQPLFPSSL
Trigger: CAGCGAGGAGGGGAAGAGAGGTTGTATCTGCAGCAAACGCTCAATGACACTGTGGGCAGGAAGATTGTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR TCA 90 bp ACACGCACGCACACACACACACACACCCAGAGGCTTGCACCCCTAGTGTGGATAAGTAATGACTCTATGTaGTGCCACCAGTACATTGGG +
Preference number: 4 (lower is better)
Translates to: TRTHTHTHTQRLAPLVWISNDSM*CHQYIG
Trigger: CCCAATGTACTGGTGGCATCACATAGAGTCATTACT...TATCCACACTAGGGGTGCAAGCCTCTGGGTGTGTGTGTGTGTGTGCGTGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTCCTGTCCTCATCAATaGAGCGGTGTGGACGGGATA +
Preference number: 4 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMSCPHQ*SGVDGI
Trigger: TATCCCGTCCACACCGCTTCATTGATGAGGACAGGA...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCTGGGACTCCACACACTaGATGCAGGACTTTAGGCGG +
Preference number: 4 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLWDSTH*MQDFRR
Trigger: CCGCCTAAAGTCCTGCATTCAGTGTGTGGAGTCCCA...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TCCCGGGGGCTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCGGCAAGAGCTGGTGCTaGAAGAGAGAAACTATATGT +
Preference number: 4 (lower is better)
Translates to: SRGLTLYCPTGKGKQWRTGKSWC*KRETIC
Trigger: ACATATAGTTTCTCTCTTTCAGCACCAGCTCTTGCC...GGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAGCCCCCGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCATGTTTGCCCGTGCCCTaGGGTGGATCACAGGTAGTG +
Preference number: 4 (lower is better)
Translates to: NGDSNPGVTSKASVLVSACLPVP*GGSQVV
Trigger: CACTACCTGTGATCCACCTCAGGGCACGGGCAAACA...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGCATCACCCACATCTTTaGGCGCTGAGCGAGGAATAC +
Preference number: 4 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMHHPHL*ALSEEY
Trigger: GTATTCCTCGCTCAGCGCTCAAAGATGTGGGTGATG...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCTCAGCAAGGACCAGCTaGGTGCATGCCTCCTTGACA +
Preference number: 4 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLSARTS*VHASLT
Trigger: TGTCAAGGAGGCATGCACTCAGCTGGTCCTTGCTGA...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TCCCGGGGGCTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCGAAGAACTTTCACCCTaGGCTGTATATTCTGCACCA +
Preference number: 4 (lower is better)
Translates to: SRGLTLYCPTGKGKQWRTEELSP*AVYSAP
Trigger: TGGTGCAGAATATACAGCTCAGGGTGAAAGTTCTTC...GGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAGCCCCCGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TTTTCCTCACGCCCTACAGTGCTGGAATGTAACAAGTACTTGTCACAGGTGGGCAGCCTGCAGCGTAGCTaGCCTCTATACAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: FSSRPTVLECNKYLSQVGSLQRS*PLYRPK
Trigger: TTTGGGCCTGTATAGAGGTCAGCTACGCTGCAGGCT...GCCCACCTGTGACAAGTACTTGTTACATTCCAGCACTGTAGGGCGTGAGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TTTTCCTCACGCCCTACAGTGCTGGAATGTAACAAGTACTTGTCACAGGTGGGCGCTGGTGTGAATAGATaGGCCTGCAGCGTAGCTGAC +
Preference number: 4 (lower is better)
Translates to: FSSRPTVLECNKYLSQVGAGVNR*ACSVAD
Trigger: GTCAGCTACGCTGCAGGCTCATCTATTCACACCAGC...GCCCACCTGTGACAAGTACTTGTTACATTCCAGCACTGTAGGGCGTGAGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AAGCTTAGGATAGGTCAGGCAGTACTTCCCGGGGGCTCACACTGTACTGTCCCAACTCCAGGACAAATCTaGGCCAGCAACCAAGACTTT +
Preference number: 4 (lower is better)
Translates to: KLRIGQAVLPGGSHCTVPTPGQI*ASNQDF
Trigger: AAAGTCTTGGTTGCTGGCTCAGATTTGTCCTGGAGT...TGGGACAGTACAGTGTGAGCCCCCGGGAAGTACTGCCTGACCTATCCTAAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGCTCCTTCTTGCCTTCTaGCTGTGCTGCTGGCTCATA +
Preference number: 4 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMLLLAF*LCCWLI
Trigger: TATGAGCCAGCAGCACAGTCAGAAGGCAAGAAGGAG...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TCTGGCAGAGGAGCTGGCTTTAAGACGCAAGCCTATGTGTTTGCCCGTGCCCTGCTGTGCAAAGTCCACTaGCATTCTCACTTAGGTTCA +
Preference number: 4 (lower is better)
Translates to: SGRGAGFKTQAYVFARALLCKVH*HSHLGS
Trigger: TGAACCTAAGTGAGAATGTCAGTGGACTTTGCACAG...CAGGGCACGGGCAAACACATAGGCTTGCGTCTTAAAGCCAGCTCCTCTGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp AAGCTTAGGATAGGTCAGGCAGTACTTCCCGGGGGCTCACACTGTACTGTCCCAACAAGAACTTGTGGGTaGTGGCACTGTACACAGAGA +
Preference number: 4 (lower is better)
Translates to: KLRIGQAVLPGGSHCTVPTRTCG*WHCTQR
Trigger: TCTCTGTGTACAGTGCCAGCACCCACAAGTTCTTGT...TGGGACAGTACAGTGTGAGCCCCCGGGAAGTACTGCCTGACCTATCCTAAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCACCGTTTCTGAGGTTGTaGCCAACAGAAATGCCCTCA +
Preference number: 4 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPPFLRL*PTEMPS
Trigger: TGAGGGCATTTCTGTTGGGCACAACCTCAGAAACGG...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp TCTGGCAGAGGAGCTGGCTTTAAGACGCAAGCCTATGTGTTTGCCCGTGCCCTGAAGGAAAGACGTGACTaGAAGGTGACTACAGAATGG +
Preference number: 4 (lower is better)
Translates to: SGRGAGFKTQAYVFARALKERRD*KVTTEW
Trigger: CCATTCTGTAGTCACCTTGCAGTCACGTCTTTCCTT...CAGGGCACGGGCAAACACATAGGCTTGCGTCTTAAAGCCAGCTCCTCTGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp TCCCGGGGGCTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCCTCTGTTCTTGTCAGTaGATCACACAAACCCTTGTG +
Preference number: 4 (lower is better)
Translates to: SRGLTLYCPTGKGKQWRTLCSCQ*ITQTLV
Trigger: CACAAGGGTTTGTGTGATGCACTGACAAGAACAGAG...GGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAGCCCCCGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp CAGATGACTGAGATTGCAGAACAACCAGATATGTTGGTTGGGCCACTGACTAGACCATGCTTGCCCCACTaGACTCCAGCCTGCGTCGAA +
Preference number: 4 (lower is better)
Translates to: QMTEIAEQPDMLVGPLTRPCLPH*TPACVE
Trigger: TTCGACGCAGGCTGGAGTGCAGTGGGGCAAGCATGG...TCTAGTCAGTGGCCCAACCAACATATCTGGTTGTTCTGCAATCTCAGTCATCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AAGCTTAGGATAGGTCAGGCAGTACTTCCCGGGGGCTCACACTGTACTGTCCCAAGAACTTGTGGGTGCTaGCACTGTACACAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: KLRIGQAVLPGGSHCTVPRTCGC*HCTQRS
Trigger: ACTTCTCTGTGTACAGTGCCAGCACCCACAAGTTCT...TGGGACAGTACAGTGTGAGCCCCCGGGAAGTACTGCCTGACCTATCCTAAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCAGCTCTGTCTGTCACATaGGTGATGAACAGGGTATGG +
Preference number: 4 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPALSVT*VMNRVW
Trigger: CCATACCCTGTTCATCACCCATGTGACAGACAGAGC...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp GGCTCTGTCTGTCACATGGGTGATGAACAGGGTATGGGTAGAGGCACTCGAACTGCTCTGTCTGTCACATaGGTGATGAACAGGGTATGG +
Preference number: 4 (lower is better)
Translates to: GSVCHMGDEQGMGRGTRTALSVT*VMNRVW
Trigger: CCATACCCTGTTCATCACCCATGTGACAGACAGAGC...AGTTCGAGTGCCTCTACCCATACCCTGTTCATCACCCATGTGACAGACAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR CCA 90 bp TCCCGGGGGCTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCAGGTCCTTTTATGTATaGCTTGAGCTTGTAGGCCCA +
Preference number: 4 (lower is better)
Translates to: SRGLTLYCPTGKGKQWRTRSFYV*LELVGP
Trigger: TGGGCCTACAAGCTCAAGCCATACATAAAAGGACCT...GGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAGCCCCCGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp TCTGGCAGAGGAGCTGGCTTTAAGACGCAAGCCTATGTGTTTGCCCGTGCCCTGCACGCCCTACAGTGCTaGAATGTAACAAGTACTTGT +
Preference number: 4 (lower is better)
Translates to: SGRGAGFKTQAYVFARALHALQC*NVTSTC
Trigger: ACAAGTACTTGTTACATTCCAGCACTGTAGGGCGTG...CAGGGCACGGGCAAACACATAGGCTTGCGTCTTAAAGCCAGCTCCTCTGCCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGCACTGTTTACACATCTaGCCTCAGAGGCCTCAGAGC +
Preference number: 4 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMHCLHI*PQRPQS
Trigger: GCTCTGAGGCCTCTGAGGCCAGATGTGTAAACAGTG...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCAATCATCTACCCCATCTaGGTGAAACTGGTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPIIYPI*VKLVPE
Trigger: CTCAGGGACCAGTTTCACCCAGATGGGGTAGATGAT...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp TCCCGGGGGCTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCTTTGGACTGCTGGACTaGAAGAAAGAGAAGCTAAGG +
Preference number: 4 (lower is better)
Translates to: SRGLTLYCPTGKGKQWRTFGLLD*KKEKLR
Trigger: CCTTAGCTTCTCTTTCTTCCAGTCCAGCAGTCCAAA...GGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAGCCCCCGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AAGCTTAGGATAGGTCAGGCAGTACTTCCCGGGGGCTCACACTGTACTGTCCCAAACTGCAGGGAGACTTaGCTTATAGTGAGGAGGAGA +
Preference number: 4 (lower is better)
Translates to: KLRIGQAVLPGGSHCTVPNCRET*LIVRRR
Trigger: TCTCCTCCTCACTATAAGCCAAGTCTCCCTGCAGTT...TGGGACAGTACAGTGTGAGCCCCCGGGAAGTACTGCCTGACCTATCCTAAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCAATACCGCCTAGAGCTTaGCTACGCAAAAACTGTCAG +
Preference number: 4 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPIPPRA*LRKNCQ
Trigger: CTGACAGTTTTTGCGTAGTCAAGCTCTAGGCGGTAT...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCGGACCCCACTCCCACTaGATAGATGTGAATGATGGC +
Preference number: 4 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLGPHSH*IDVNDG
Trigger: GCCATCATTCACATCTATTCAGTGGGAGTGGGGTCC...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTAGTGGGGTGATATCTTaGGGACAGAACCTGTGGTAC +
Preference number: 4 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTSGVIS*GQNLWY
Trigger: GTACCACAGGTTCTGTCCTCAAGATATCACCCCACT...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp ACACGCACGCACACACACACACACACCCAGAGGCTTGCACCCCTAGTGTGGATATGTAATTTAGAGCTCTaGTTTGTAGGGGAAGCTGGT +
Preference number: 4 (lower is better)
Translates to: TRTHTHTHTQRLAPLVWICNLEL*FVGEAG
Trigger: ACCAGCTTCCCCTACAAATCAGAGCTCTAAATTACA...TATCCACACTAGGGGTGCAAGCCTCTGGGTGTGTGTGTGTGTGTGCGTGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGAAACCATTACGCAAATaGGAGCAGACGACTTCCCCC +
Preference number: 4 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMKPLRK*EQTTSP
Trigger: GGGGGAAGTCGTCTGCTCTCATTTGCGTAATGGTTT...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TCTGGCAGAGGAGCTGGCTTTAAGACGCAAGCCTATGTGTTTGCCCGTGCCCTGGTGTCTAATCACCAGTaGCAGAAACCATTACGCAAA +
Preference number: 4 (lower is better)
Translates to: SGRGAGFKTQAYVFARALVSNHQ*QKPLRK
Trigger: TTTGCGTAATGGTTTCTGTCACTGGTGATTAGACAC...CAGGGCACGGGCAAACACATAGGCTTGCGTCTTAAAGCCAGCTCCTCTGCCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCGATGGAAACCCTCCATaGAGGGGACATGTTCCACGT +
Preference number: 4 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLDGNPP*RGHVPR
Trigger: ACGTGGAACATGTCCCCTTCATGGAGGGTTTCCATC...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AAGCTTAGGATAGGTCAGGCAGTACTTCCCGGGGGCTCACACTGTACTGTCCCACTTGTAGAGGCTAAGTaGCTTGGGTGTGTGGTAATA +
Preference number: 4 (lower is better)
Translates to: KLRIGQAVLPGGSHCTVPLVEAK*LGCVVI
Trigger: TATTACCACACACCCAAGTCACTTAGCCTCTACAAG...TGGGACAGTACAGTGTGAGCCCCCGGGAAGTACTGCCTGACCTATCCTAAGCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp ACACGCACGCACACACACACACACACCCAGAGGCTTGCACCCCTAGTGTGGATACAGAGAAGTCTCCATTaGCAATATTCTCTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: TRTHTHTHTQRLAPLVWIQRSLH*QYSLAG
Trigger: ACCTGCAAGAGAATATTGGCAATGGAGACTTCTCTG...TATCCACACTAGGGGTGCAAGCCTCTGGGTGTGTGTGTGTGTGTGCGTGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp ATGGGTGATGAACAGGGTATGGGTAGAGGCACTCGAACTGATCCGGAGGGAATATTGTCAAAGTCCACCTaGCTCTGTCTGTCACATGGG +
Preference number: 4 (lower is better)
Translates to: MGDEQGMGRGTRTDPEGILSKST*LCLSHG
Trigger: CCCATGTGACAGACAGAGCCAGGTGGACTTTGACAA...TATTCCCTCCGGATCAGTTCGAGTGCCTCTACCCATACCCTGTTCATCACCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR CCA 90 bp TCCCGGGGGCTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCATGCCACCAGTACATTaGGATGTAAAGAACATCACC +
Preference number: 4 (lower is better)
Translates to: SRGLTLYCPTGKGKQWRTMPPVH*DVKNIT
Trigger: GGTGATGTTCTTTACATCCCAATGTACTGGTGGCAT...GGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAGCCCCCGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATGGGCCCCACCTCTTGTaGGTTCCCCAAGGCCTCTCC +
Preference number: 4 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYGPHLL*VPQGLS
Trigger: GGAGAGGCCTTGGGGAACCCACAAGAGGTGGGGCCC...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AGCACCATTATCTTGAGAGTCAGAGTAGGATCAGAAAAGCCTTGCTGCTGTAGTGGGATAGCAGTCACCTaGCAGGAGGCCTTGACCCCT +
Preference number: 4 (lower is better)
Translates to: STIILRVRVGSEKPCCCSGIAVT*QEALTP
Trigger: AGGGGTCAAGGCCTCCTGCCAGGTGACTGCTATCCC...ACTACAGCAGCAAGGCTTTTCTGATCCTACTCTGACTCTCAAGATAATGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp CAGATGACTGAGATTGCAGAACAACCAGATATGTTGGTTGGGCCACTGACTAGACTCCCCCAGGCATCCTaGGCATCTGCTCAACTGATG +
Preference number: 4 (lower is better)
Translates to: QMTEIAEQPDMLVGPLTRLPQAS*ASAQLM
Trigger: CATCAGTTGAGCAGATGCCCAGGATGCCTGGGGGAG...TCTAGTCAGTGGCCCAACCAACATATCTGGTTGTTCTGCAATCTCAGTCATCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp ACACGCACGCACACACACACACACACCCAGAGGCTTGCACCCCTAGTGTGGATAAATGGGATCATGATGTaGAAAGGGCTGAGAATTCCA +
Preference number: 4 (lower is better)
Translates to: TRTHTHTHTQRLAPLVWINGIMM*KGLRIP
Trigger: TGGAATTCTCAGCCCTTTCCACATCATGATCCCATT...TATCCACACTAGGGGTGCAAGCCTCTGGGTGTGTGTGTGTGTGTGCGTGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGAAGGTGACTACAGAATaGCCTGTAGCCCAGAGGGAT +
Preference number: 4 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMKVTTE*PVAQRD
Trigger: ATCCCTCTGGGCTACAGGCCATTCTGTAGTCACCTT...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp ACACGCACGCACACACACACACACACCCAGAGGCTTGCACCCCTAGTGTGGATAAGACAGAAAGCTAGATaGGGAAGAGAGGTAAAGACT +
Preference number: 4 (lower is better)
Translates to: TRTHTHTHTQRLAPLVWIRQKAR*GREVKT
Trigger: AGTCTTTACCTCTCTTCCCCATCTAGCTTTCTGTCT...TATCCACACTAGGGGTGCAAGCCTCTGGGTGTGTGTGTGTGTGTGCGTGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 72 bp GAGGATCTGAGTATTTATAGAGAACTGCAGGGAGACTaGGCTTATAGTGAGGAGGAGAGGTGGCTGGGCGTG +
Preference number: 4 (lower is better)
Translates to: EDLSIYRELQGD*AYSEEERWLGV
Trigger: CACGCCCAGCCACCTCTCCTCCTCACTATAAGCCAAGTCTCCCTGCAGTTCTCTATAAATACTCAGATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAACTGTACCTGCTGGTGTaGATAGATGAGCCTGCAGCG +
Preference number: 4 (lower is better)
Translates to: FVGSCPKMSVPISISGWQLYLLV*IDEPAA
Trigger: CGCTGCAGGCTCATCTATTCACACCAGCAGGTACAG...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TCCCGGGGGCTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCAAGGACAGCAGAATATaGGAAGTAACACAGAGACAT +
Preference number: 4 (lower is better)
Translates to: SRGLTLYCPTGKGKQWRTKDSRI*EVTQRH
Trigger: ATGTCTCTGTGTTACTTCTCATATTCTGCTGTCCTT...GGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAGCCCCCGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TCCCGGGGGCTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCTCTACTCCTGACATCTaGCTACGCAATATACTGTTT +
Preference number: 4 (lower is better)
Translates to: SRGLTLYCPTGKGKQWRTSTPDI*LRNILF
Trigger: AAACAGTATATTGCGTAGTCAGATGTCAGGAGTAGA...GGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAGCCCCCGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCATAGTCTCAAACTCCTaGCCTCAGGTGATCCACCCA +
Preference number: 4 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLIVSNS*PQVIHP
Trigger: TGGGTGGATCACCTGAGGTCAGGAGTTTGAGACTAT...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTCCCTCTTACAGAACTaGTCTCTCCTCAGAAAAGGG +
Preference number: 4 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMSLLQN*SLLRKG
Trigger: CCCTTTTCTGAGGAGAGATCAGTTCTGTAAGAGGGA...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCATTCCTAAGGTTCTCCTaGCAGAATGCTGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: NGDSNPGVTSKASVLVSAFLRFS*QNAGLL
Trigger: GAGGAGGCCAGCATTCTGTCAGGAGAACCTTAGGAA...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp TGTCAAAGTCCACCTGGCTCTGTCTGTCACATGGGTGATGAACAGGGTATGGGTACAAGAACTTGTGGGTaGTGGCACTGTACACAGAGA +
Preference number: 4 (lower is better)
Translates to: CQSPPGSVCHMGDEQGMGTRTCG*WHCTQR
Trigger: TCTCTGTGTACAGTGCCAGCACCCACAAGTTCTTGT...ACCCATACCCTGTTCATCACCCATGTGACAGACAGAGCCAGGTGGACTTTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR GCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATACAGGGCCACCACACTaGCCAATCCCAGGGACCCCA +
Preference number: 4 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYTGPPH*PIPGTP
Trigger: TGGGGTCCCTGGGATTGGGCAGTGTGGTGGCCCTGT...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTGGAGGCCTTGACCCCTaGCAGGCTAGTTGTATCGGC +
Preference number: 4 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSGGLDP*QASCIG
Trigger: GCCGATACAACTAGCCTGCCAGGGGTCAAGGCCTCC...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AGCACCATTATCTTGAGAGTCAGAGTAGGATCAGAAAAGCCTTGCTGCTGTAGTGCAGCCCAGATGCAGTaGGGAGTCCAAGAGCATCTC +
Preference number: 4 (lower is better)
Translates to: STIILRVRVGSEKPCCCSAAQMQ*GVQEHL
Trigger: GAGATGCTCTTGGACTCCCCACTGCATCTGGGCTGC...ACTACAGCAGCAAGGCTTTTCTGATCCTACTCTGACTCTCAAGATAATGGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCATAAAGGATATGGCCTaGGCAGGGAGCATCATAGGG +
Preference number: 4 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLIKDMA*AGSIIG
Trigger: CCCTATGATGCTCCCTGCCCAGGCCATATCCTTTAT...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCATGCACCATCTTGGGCTaGGTCTGCCTTCAGATACTG +
Preference number: 4 (lower is better)
Translates to: NGDSNPGVTSKASVLVSACTILG*VCLQIL
Trigger: CAGTATCTGAAGGCAGACCCAGCCCAAGATGGTGCA...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCTGCCGGGAGGAGTTATaGGTCCTATTCAAGGACACA +
Preference number: 4 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLCREEL*VLFKDT
Trigger: TGTGTCCTTGAATAGGACCCATAACTCCTCCCGGCA...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTATTTGTAGGGGAAGCTaGTCTCCCCCAGGCATCCTG +
Preference number: 4 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVICRGS*SPPGIL
Trigger: CAGGATGCCTGGGGGAGACCAGCTTCCCCTACAAAT...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp TTTTCCTCACGCCCTACAGTGCTGGAATGTAACAAGTACTTGTCACAGGTGGGCAGTACTTGTCACAGGTaGGCTATGAGGGGTGTTGAC +
Preference number: 4 (lower is better)
Translates to: FSSRPTVLECNKYLSQVGSTCHR*AMRGVD
Trigger: GTCAACACCCCTCATAGCCCACCTGTGACAAGTACT...GCCCACCTGTGACAAGTACTTGTTACATTCCAGCACTGTAGGGCGTGAGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCACTGCAAAGGGGATATTaGTATCTCCTTCTGACAGCT +
Preference number: 4 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPLQRGY*YLLLTA
Trigger: AGCTGTCAGAAGGAGATACCAATATCCCCTTTGCAG...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTAGCCTCCCGAGTAGCTaGGATTACAGGTACCCACCA +
Preference number: 4 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVSLPSS*DYRYPP
Trigger: TGGTGGGTACCTGTAATCCCAGCTACTCGGGAGGCT...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AAGCTTAGGATAGGTCAGGCAGTACTTCCCGGGGGCTCACACTGTACTGTCCCAAAGCAGTGTTTGTTTTaGACTGCTGGACTGGAAGAA +
Preference number: 4 (lower is better)
Translates to: KLRIGQAVLPGGSHCTVPKQCLF*TAGLEE
Trigger: TTCTTCCAGTCCAGCAGTCCAAAACAAACACTGCTT...TGGGACAGTACAGTGTGAGCCCCCGGGAAGTACTGCCTGACCTATCCTAAGCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGCCATCTCCAGTACTGTaGAGTCCTGCTCCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRPSPVL*SPAPFS
Trigger: GGAGAAGGGAGCAGGACTCCACAGTACTGGAGATGG...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 72 bp TCTACTGGTTTCCTCCTCTCTCAACAGTCCCTAATCTaGTCCACACAGGGTGCACGATATACAAGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: STGFLLSQQSLI*STQGARYTSVA
Trigger: GGCCACACTTGTATATCGTGCACCCTGTGTGGACAAGATTAGGGACTGTTGAGAGAGGAGGAAACCAGTAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATGCTGAGAGCCGGAAGTaGCAGCCTGACCCAGAAGGA +
Preference number: 4 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYAESRK*QPDPEG
Trigger: TCCTTCTGGGTCAGGCTGTCACTTCCGGCTCTCAGC...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTCTGAATAGATGTGAATaGTGGCCCTTCAAGTTGTGC +
Preference number: 4 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTLNRCE*WPFKLC
Trigger: GCACAACTTGAAGGGCCATCATTCACATCTATTCAG...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAACACATCTTTGAGCGCTaGGCGAGGAATACAGCAGAC +
Preference number: 4 (lower is better)
Translates to: FVGSCPKMSVPISISGWQHIFER*ARNTAD
Trigger: GTCTGCTGTATTCCTCGCTCAGCGCTCAAAGATGTG...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAAAAGGGGCTACCACAGTaGGACAAGCTGAACCAGGAT +
Preference number: 4 (lower is better)
Translates to: FVGSCPKMSVPISISGWQKGLPQ*DKLNQD
Trigger: ATCCTGGTTCAGCTTGTCTCACTGTGGTAGCCCCTT...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTCCACCCCTGAACTACTaGTCCCTAAGGCACACAGAT +
Preference number: 4 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVPPLNY*SLRHTD
Trigger: ATCTGTGTGCCTTAGGGATCAGTAGTTCAGGGGTGG...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CAGATGACTGAGATTGCAGAACAACCAGATATGTTGGTTGGGCCACTGACTAGAGTCAGGCACATTTGGTaGCACAGAGCCAAAGACACC +
Preference number: 4 (lower is better)
Translates to: QMTEIAEQPDMLVGPLTRVRHIW*HRAKDT
Trigger: GGTGTCTTTGGCTCTGTGTCACCAAATGTGCCTGAC...TCTAGTCAGTGGCCCAACCAACATATCTGGTTGTTCTGCAATCTCAGTCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTAGGGGAGCTCAGACCTaGAACCTTCTCACCCAAGGC +
Preference number: 4 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSRGAQT*NLLTQG
Trigger: GCCTTGGGTGAGAAGGTTTCAGGTCTGAGCTCCCCT...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AGCACCATTATCTTGAGAGTCAGAGTAGGATCAGAAAAGCCTTGCTGCTGTAGTGAGACACAGAAAGACTaGGCCCTTGCTATGGACCGG +
Preference number: 4 (lower is better)
Translates to: STIILRVRVGSEKPCCCSETQKD*ALAMDR
Trigger: CCGGTCCATAGCAAGGGCTCAGTCTTTCTGTGTCTC...ACTACAGCAGCAAGGCTTTTCTGATCCTACTCTGACTCTCAAGATAATGGTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AAGCTTAGGATAGGTCAGGCAGTACTTCCCGGGGGCTCACACTGTACTGTCCCAAATAAAACATTTTCCTaGGTGCTTGAGCCAGGTGTT +
Preference number: 4 (lower is better)
Translates to: KLRIGQAVLPGGSHCTVPNKTFS*VLEPGV
Trigger: AACACCTGGCTCAAGCACTCAGGAAAATGTTTTATT...TGGGACAGTACAGTGTGAGCCCCCGGGAAGTACTGCCTGACCTATCCTAAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATAGGTTGAGGCTGCAGTaGGCCATGCTTGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYRLRLQ*AMLAPL
Trigger: CAGTGGGGCAAGCATGGCTCACTGCAGCCTCAACCT...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTGGCAGGAGGATCACTTaGGTCCAGGAGGTTGAGGCT +
Preference number: 4 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSGRRIT*VQEVEA
Trigger: AGCCTCAACCTCCTGGACTCAAGTGATCCTCCTGCC...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCATCGGGAAGCTATAACTaGGCAACTGGGATTCATCCC +
Preference number: 4 (lower is better)
Translates to: NGDSNPGVTSKASVLVSASGSYN*ATGIHP
Trigger: GGGATGAATCCCAGTTGCGCAGTTATAGCTTCCCGA...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTCTTCACATCCACACTaGATCAGAGAACCCCAGAAT +
Preference number: 4 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMSSHPH*IREPQN
Trigger: ATTCTGGGGTTCTCTGATGCAGTGTGGATGTGAAGA...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp CAGATGACTGAGATTGCAGAACAACCAGATATGTTGGTTGGGCCACTGACTAGAGCCTGGGTAGAGCTTTaGTCTCTACTGGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: QMTEIAEQPDMLVGPLTRAWVEL*SLLVSS
Trigger: GGAGGAAACCAGTAGAGAGCAAAGCTCTACCCAGGC...TCTAGTCAGTGGCCCAACCAACATATCTGGTTGTTCTGCAATCTCAGTCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATCGGCCTCTCACACAGTaGAAGGGGAGCTCAGACCTG +
Preference number: 4 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYRPLTQ*KGSSDL
Trigger: CAGGTCTGAGCTCCCCTTGCACTGTGTGAGAGGCCG...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTTCTCCTGCATCCTTGTaGACATCCCAGGGTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCSPASL*TSQGLL
Trigger: AAGGAGACCCTGGGATGTGCACAAGGATGCAGGAGA...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTTGTTCCTCAAGACCCTaGCCTATTAAACCCTTTCTG +
Preference number: 4 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTCSSRP*PIKPFL
Trigger: CAGAAAGGGTTTAATAGGGCAGGGTCTTGAGGAACA...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTGTTCACACTAAGACATaGACAGTTGAGTCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTVHTKT*TVESSC
Trigger: ACAGGAGGACTCAACTGTGCATGTCTTAGTGTGAAC...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp GATTGTCAAAGTCCACCTGGCTCTGTCTGTCACATGGGTGATGAACAGGGTATGAGAACTTGTGGGTGCTaGCACTGTACACAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: DCQSPPGSVCHMGDEQGMRTCGC*HCTQRS
Trigger: ACTTCTCTGTGTACAGTGCCAGCACCCACAAGTTCT...CATACCCTGTTCATCACCCATGTGACAGACAGAGCCAGGTGGACTTTGACAATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR CCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAACTGACTCCTGGGCCATaGCAAGAGTCCAGTCCATTA +
Preference number: 4 (lower is better)
Translates to: FVGSCPKMSVPISISGWQLTPGP*QESSPL
Trigger: TAATGGACTGGACTCTTGCCATGGCCCAGGAGTCAG...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCTCAGATACTGCCCAGTaGGGTGATATCTTGAGGACA +
Preference number: 4 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLSDTAQ*GDILRT
Trigger: TGTCCTCAAGATATCACCCCACTGGGCAGTATCTGA...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATACTCCCCATACTGGGCTaGCCCACTGATAAGGATCCT +
Preference number: 4 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPILPILG*PTDKDP
Trigger: AGGATCCTTATCAGTGGGCCAGCCCAGTATGGGGAG...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGACAGCTGCACTGATGTaGGGTTGTGGGGACATCAAC +
Preference number: 4 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRTAALM*GCGDIN
Trigger: GTTGATGTCCCCACAACCCCACATCAGTGCAGCTGT...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGTGGGAAGAGCCAAGGTaGGCTGCTCCACACCTGAAG +
Preference number: 4 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQWEEPR*AAPHLK
Trigger: CTTCAGGTGTGGAGCAGCCCACCTTGGCTCTTCCCA...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTTCTGGAGAGGGAGGCTaGAACATCCCTTTAGAGCCA +
Preference number: 4 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVSGEGG*NIPLEP
Trigger: TGGCTCTAAAGGGATGTTCCAGCCTCCCTCTCCAGA...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCTCTGAGAGCACCACATaGGGACGAACTAATACAGTG +
Preference number: 4 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLSESTT*GRTNTV
Trigger: CACTGTATTAGTTCGTCCCCATGTGGTGCTCTCAGA...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATCTTCCAAGTAGGGTCTaGCAGGGTGGCTCCAGAGGC +
Preference number: 4 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYLPSRV*QGGSRG
Trigger: GCCTCTGGAGCCACCCTGCCAGACCCTACTTGGAAG...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGGATACCTTGTCTCAGTaGCAAATTTCCTTGGCTGTC +
Preference number: 4 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMDTLSQ*QISLAV
Trigger: GACAGCCAAGGAAATTTGCCACTGAGACAAGGTATC...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 72 bp AAGAAGTCCATGACAATCTTCCTGCCCACAGTGTCATaGAGCGTTTGCTGCAGATACAACCTCTCTTCCCCT +
Preference number: 4 (lower is better)
Translates to: KKSMTIFLPTVS*SVCCRYNLSSP
Trigger: AGGGGAAGAGAGGTTGTATCTGCAGCAAACGCTCAATGACACTGTGGGCAGGAAGATTGTCATGGACTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR TCA 90 bp CTTCTCATCATAGTACAAGAACTTGTGGGTGCTGGCACTGTACACAGAGAAGTCTGCCCACAGTGTCATTaGGCGTTTGCTGCAGATACA +
Preference number: 4 (lower is better)
Translates to: LLIIVQELVGAGTVHREVCPQCH*AFAADT
Trigger: TGTATCTGCAGCAAACGCTCAATGACACTGTGGGCA...GACTTCTCTGTGTACAGTGCCAGCACCCACAAGTTCTTGTACTATGATGAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR TCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTGAGTGCATGCCTCCTTaGCACATCACCCACATCTTT +
Preference number: 4 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVECMPP*HITHIF
Trigger: AAAGATGTGGGTGATGTGTCAAGGAGGCATGCACTC...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTGTCACAGGTGGGCTATaGGGGGTGTTGACTATTACA +
Preference number: 4 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCVTGGL*GVLTIT
Trigger: TGTAATAGTCAACACCCCTCATAGCCCACCTGTGAC...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTAAGAGGGGCCTGATTTaGCTGCTATTACATTTCATG +
Preference number: 4 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTKRGLI*LLLHFM
Trigger: CATGAAATGTAATAGCAGTCAAATCAGGCCCCTCTT...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AGCACCATTATCTTGAGAGTCAGAGTAGGATCAGAAAAGCCTTGCTGCTGTAGTAGGCCAGAACACAAATaGGAACGGTGGAGGGCTACA +
Preference number: 4 (lower is better)
Translates to: STIILRVRVGSEKPCCCSRPEHK*ERWRAT
Trigger: TGTAGCCCTCCACCGTTCTCATTTGTGTTCTGGCCT...ACTACAGCAGCAAGGCTTTTCTGATCCTACTCTGACTCTCAAGATAATGGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTGCTAGTGGCAAATGGTaGTTCAAACCCAGGAGTCAC +
Preference number: 4 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVASGKW*FKPRSH
Trigger: GTGACTCCTGGGTTTGAATCACCATTTGCCACTAGC...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCCAGATGAAACCTGGTTaGATGCAGGATTGCTGTAAC +
Preference number: 4 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLQMKPG*MQDCCN
Trigger: GTTACAGCAATCCTGCATTCAACCAGGTTTCATCTG...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp GGTGTCACATTTCCTTCCATGCCAATGAGCAGCAGGTTAGAGGTAAGCTGCCCCTTGCCAATATTCTCTTaGAGGTATTCAAGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: GVTFPSMPMSSRLEVSCPLPIFS*RYSRSH
Trigger: ATGGGACCTTGAATACCTGCAAGAGAATATTGGCAA...GGGGCAGCTTACCTCTAACCTGCTGCTCATTGGCATGGAAGGAAATGTGACACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR GCA 90 bp TCTGTCTGTCACATGGGTGATGAACAGGGTATGGGTAGAGGCACTCGAACTGATTCATTGAGCGTTTGCTaGAGATACAACCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: SVCHMGDEQGMGRGTRTDSLSVC*RYNLSS
Trigger: GGAAGAGAGGTTGTATCTGCAGCAAACGCTCAATGA...ATCAGTTCGAGTGCCTCTACCCATACCCTGTTCATCACCCATGTGACAGACAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR GCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATAGGTTAGAGGTAAGCTaGCCCCAGCCACGCTTTCCC +
Preference number: 4 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYRLEVS*PQPRFP
Trigger: GGGAAAGCGTGGCTGGGGGCAGCTTACCTCTAACCT...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTCAAATAGGAGTGGAGTaGCAACTGCCCTGCCTCGCT +
Preference number: 4 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSQIGVE*QLPCLA
Trigger: AGCGAGGCAGGGCAGTTGGCACTCCACTCCTATTTG...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGGACCAGCTGAGTGCATaGCTCCTTGACACATCACCC +
Preference number: 4 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQDQLSA*LLDTSP
Trigger: GGGTGATGTGTCAAGGAGGCATGCACTCAGCTGGTC...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATAATCTTGGGCTGGGTCTaGCTTCAGATACTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPIILGWV*LQILPS
Trigger: ACTGGGCAGTATCTGAAGGCAGACCCAGCCCAAGAT...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTGGCATCCTGGGCATCTaGTCAACTGATGCCCAGAAC +
Preference number: 4 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSGILGI*STDAQN
Trigger: GTTCTGGGCATCAGTTGAGCAGATGCCCAGGATGCC...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCAGAAATGCCCTCAAAGTaGTCAGCAAGGCTCCATTCA +
Preference number: 4 (lower is better)
Translates to: NGDSNPGVTSKASVLVSAEMPSK*SARLHS
Trigger: TGAATGGAGCCTTGCTGAGCACTTTGAGGGCATTTC...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp AGCACCATTATCTTGAGAGTCAGAGTAGGATCAGAAAAGCCTTGCTGCTGTAGTCAGCAACCACTGGGATaGAGAGGTCAGGCACATTTG +
Preference number: 4 (lower is better)
Translates to: STIILRVRVGSEKPCCCSQQPLG*RGQAHL
Trigger: CAAATGTGCCTGACCTCTGCATCCCAGTGGTTGCTG...ACTACAGCAGCAAGGCTTTTCTGATCCTACTCTGACTCTCAAGATAATGGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTGACAATCTCGTCTCCTaGATCCTTGTGCACATCCCA +
Preference number: 4 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCDNLVS*ILVHIP
Trigger: TGGGATGTGCACAAGGATGCAGGAGACGAGATTGTC...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTCACTGCACTCCAGCCTaGGTCGAAAAGCAATGCCCT +
Preference number: 4 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSHCTPA*VEKQCP
Trigger: AGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAGTG...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAAGTGATGAACAGGGTATaGGTAGAGGCACTCGAACTG +
Preference number: 4 (lower is better)
Translates to: FVGSCPKMSVPISISGWQVMNRV*VEALEL
Trigger: CAGTTCGAGTGCCTCTACCCATACCCTGTTCATCAC...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGTTGTCAAAGTCCACCTaGCTCTGTCTGTCACATGGG +
Preference number: 4 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRLSKST*LCLSHG
Trigger: CCCATGTGACAGACAGAGCCAGGTGGACTTTGACAA...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCATCAACATAGTTTGGTaGAAAGGAAGGAGCAAGGGG +
Preference number: 4 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLINIVW*KGRSKG
Trigger: CCCCTTGCTCCTTCCTTTCCACCAAACTATGTTGAT...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAATATTCTGCACCATCTTaGGCTGGGTCTGCCTTCAGA +
Preference number: 4 (lower is better)
Translates to: FVGSCPKMSVPISISGWQYSAPS*AGSAFR
Trigger: TCTGAAGGCAGACCCAGCCCAAGATGGTGCAGAATA...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTTCTCACCCAAGGCCCTaGGCTGGTAGTACAGCAGTA +
Preference number: 4 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSSHPRP*AGSTAV
Trigger: TACTGCTGTACTACCAGCCCAGGGCCTTGGGTGAGA...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGCCCAGAGGGATGGGTTaGCACAAGCTAAAGAGGTAT +
Preference number: 4 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRPRGMG*HKLKRY
Trigger: ATACCTCTTTAGCTTGTGCCAACCCATCCCTCTGGG...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCAAGAAAGTGCTATTTGTaGCCTCATAAAGCCCTATCA +
Preference number: 4 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPRKCYL*PHKALS
Trigger: TGATAGGGCTTTATGAGGCCACAAATAGCACTTTCT...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGCTTTTATGTATGGCTTaGGCTTGTAGGCCCAGTTGG +
Preference number: 4 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRLLCMA*ACRPSW
Trigger: CCAACTGGGCCTACAAGCTCAAGCCATACATAAAAG...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTAGTTGCCCTGACTATTaGGGGTGTTGTGGCACATTA +
Preference number: 4 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCSCPDY*GCCGTL
Trigger: TAATGTGCCACAACACCCTCAATAGTCAGGGCAACT...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATATGGAAGACAAGCAGCTaGAGGTCTCAAAGGGGAGTA +
Preference number: 4 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPIWKTSS*RSQRGV
Trigger: TACTCCCCTTTGAGACCTTCAGCTGCTTGTCTTCCA...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGCACAGTGAGACAAGCTaGACCAGGATGTACAGAACT +
Preference number: 4 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRHSETS*TRMYRT
Trigger: AGTTCTGTACATCCTGGTTCAGCTTGTCTCACTGTG...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTCTAGAAGGAAAGACGTaGCTGCAAGGTGACTACAGA +
Preference number: 4 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVLEGKT*LQGDYR
Trigger: TCTGTAGTCACCTTGCAGTCACGTCTTTCCTTCTAG...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGCCGGAGGGAATAAGATaGATCGTTTGTAACCTTTTA +
Preference number: 4 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMPEGIR*IVCNLL
Trigger: TAAAAGGTTACAAACGATGCATCTTATTCCCTCCGG...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTCCATTAAGTGCAGCGTaGAATACTAGCGCTTGGAGT +
Preference number: 4 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVPLSAA*NTSAWS
Trigger: ACTCCAAGCGCTAGTATTGCACGCTGCACTTAATGG...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGTTTCCTCCGCTCCTGTaGTCCTCTTTCCCAAAAGAA +
Preference number: 4 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRFPPLL*SSFPKE
Trigger: TTCTTTTGGGAAAGAGGAGCACAGGAGCGGAGGAAA...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp AGCACCATTATCTTGAGAGTCAGAGTAGGATCAGAAAAGCCTTGCTGCTGTAGTCTGAGCTGTATATTCTaGACCATCTTGGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: STIILRVRVGSEKPCCCSLSCIF*TILGWV
Trigger: GACCCAGCCCAAGATGGTGCAGAATATACAGCTCAG...ACTACAGCAGCAAGGCTTTTCTGATCCTACTCTGACTCTCAAGATAATGGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGACCCCCACCTTCACTTaGTGTATGTGTGTGTCCCAC +
Preference number: 4 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQTPTFT*CMCVSH
Trigger: GTGGGACACACACATACAGCAAGTGAAGGTGGGGGT...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp TTTTCCTCACGCCCTACAGTGCTGGAATGTAACAAGTACTTGTCACAGGTGGGCAAGAAATACAAGCTCTaGCCACTTGTGGCAATACTG +
Preference number: 4 (lower is better)
Translates to: FSSRPTVLECNKYLSQVGKKYKL*PLVAIL
Trigger: CAGTATTGCCACAAGTGGGCAGAGCTTGTATTTCTT...GCCCACCTGTGACAAGTACTTGTTACATTCCAGCACTGTAGGGCGTGAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATAGAGCCAAGGTGGGCTaGTCCACACCTGAAGACTCA +
Preference number: 4 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYRAKVG*STPEDS
Trigger: TGAGTCTTCAGGTGTGGAGCAGCCCACCTTGGCTCT...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCATTTCTGAATTTTGATTaGCCTTCTCCCCTAGAACAA +
Preference number: 4 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPFLNFD*PSPLEQ
Trigger: TTGTTCTAGGGGAGAAGGGCAATCAAAATTCAGAAA...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAATCAGAAAAGCCTTGCTaGTGTAGTCTCTCCAGACAC +
Preference number: 4 (lower is better)
Translates to: FVGSCPKMSVPISISGWQSEKPC*CSLSRH
Trigger: GTGTCTGGAGAGACTACAGCAGCAAGGCTTTTCTGA...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAAGGATCAGAAAAGCCTTaGTGCTGTAGTCTCTCCAGA +
Preference number: 4 (lower is better)
Translates to: FVGSCPKMSVPISISGWQGSEKP*CCSLSR
Trigger: TCTGGAGAGACTACAGCAGCAAGGCTTTTCTGATCC...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTCCACAGACATCCTCCTaGCCCATTTCCTTTACTCTT +
Preference number: 4 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVPQTSS*PISFTL
Trigger: AAGAGTAAAGGAAATGGGGCAGGAGGATGTCTGTGG...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTAGGCTGAGGCAGAATTaGTTGAACCTGGAGGAGGTG +
Preference number: 4 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSRLRQN*LNLEEV
Trigger: CACCTCCTCCAGGTTCAAGCAATTCTGCCTCAGCCT...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTGAGTCCTCCTGTTTATaGTGGGTAAACGATGCTTCC +
Preference number: 4 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCESSCL*WVNDAS
Trigger: GGAAGCATCGTTTACCCAGCATAAACAGGAGGACTC...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp TTTTCCTCACGCCCTACAGTGCTGGAATGTAACAAGTACTTGTCACAGGTGGGCCTCGGCTTAAAGTTCTaGAAATTGGCCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: FSSRPTVLECNKYLSQVGLGLKF*KLAIFF
Trigger: GAAGAAGATGGCCAATTTCCAGAACTTTAAGCCGAG...GCCCACCTGTGACAAGTACTTGTTACATTCCAGCACTGTAGGGCGTGAGGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp TCTGTCTGTCACATGGGTGATGAACAGGGTATGGGTAGAGGCACTCGAACTGATCTCGGCTTAAAGTTCTaGAAATTGGCCATCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SVCHMGDEQGMGRGTRTDLGLKF*KLAIFF
Trigger: GAAGAAGATGGCCAATTTCCAGAACTTTAAGCCGAG...ATCAGTTCGAGTGCCTCTACCCATACCCTGTTCATCACCCATGTGACAGACAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR CCA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCACAATGTTTCTCATTATaGCCACTTTCTGATGAGCTT +
Preference number: 4 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPQCFSL*PLSDEL
Trigger: AAGCTCATCAGAAAGTGGCCATAATGAGAAACATTG...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTTGCAATACTAGCGCTTaGAGTCTCCTGTCCTCATCA +
Preference number: 4 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVCNTSA*SLLSSS
Trigger: TGATGAGGACAGGAGACTCCAAGCGCTAGTATTGCA...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATAACCTCATCTTTTCCTTaGGGGGAAGCAGCAGCTGAA +
Preference number: 4 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPITSSFP*GEAAAE
Trigger: TTCAGCTGCTGCTTCCCCCCAAGGAAAAGATGAGGT...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCATATTTCTATCTTTGTTaGCTCATGCCCAAAGATGTC +
Preference number: 4 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPYFYLC*LMPKDV
Trigger: GACATCTTTGGGCATGAGCCAACAAAGATAGAAATA...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATAAGTAACACAGAGACATaGGAAGAGCCAAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPISNTET*EEPRWA
Trigger: AGCCCACCTTGGCTCTTCCCATGTCTCTGTGTTACT...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTTGGGACTCAAACTCTTaGAGGAGTGGAGAGATAGTC +
Preference number: 4 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCWDSNS*RSGEIV
Trigger: GACTATCTCTCCACTCCTCCAAGAGTTTGAGTCCCA...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTGTCTCACCCATTCCCTaGAGTAAGGTACGACAAAAC +
Preference number: 4 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCVSPIP*SKVRQN
Trigger: GTTTTGTCGTACCTTACTCCAGGGAATGGGTGAGAC...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 72 bp GGTACGACAAAACCCTTAGGCATTGGGAAGCAGTGTTaGTTTTGGACTGCTGGACTGGAAGAAAGAGAAGCT +
Preference number: 4 (lower is better)
Translates to: GTTKPLGIGKQC*FWTAGLEEREA
Trigger: AGCTTCTCTTTCTTCCAGTCCAGCAGTCCAAAACAAACACTGCTTCCCAATGCCTAAGGGTTTTGTCGTACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 72 bp TTGTGGGTGCTGGCACTGTACACAGAGAAGTCTCCATaGCCAATATTCTCTTGCAGGTATTCAAGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: LWVLALYTEKSP*PIFSCRYSRSH
Trigger: ATGGGACCTTGAATACCTGCAAGAGAATATTGGCAATGGAGACTTCTCTGTGTACAGTGCCAGCACCCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR TCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATTCAGTGCACTATAACTaGGCTTCAGGGGTGAGAGCC +
Preference number: 4 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYSVHYN*ASGVRA
Trigger: GGCTCTCACCCCTGAAGCTCAGTTATAGTGCACTGA...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTCACATTTCCCAGCATTaGCTATATTTGAAAGAGCTA +
Preference number: 4 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTHISQH*LYLKEL
Trigger: TAGCTCTTTCAAATATAGTCAATGCTGGGAAATGTG...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTGGCTATGAGGGGTGTTaGCTATTACAAAAACATTTT +
Preference number: 4 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTGYEGC*LLQKHF
Trigger: AAAATGTTTTTGTAATAGTCAACACCCCTCATAGCC...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATGGGCTGCTCCACACCTaGAGACTCATCCTATTACTG +
Preference number: 4 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYGLLHT*RLILLL
Trigger: CAGTAATAGGATGAGTCTTCAGGTGTGGAGCAGCCC...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AGCACCATTATCTTGAGAGTCAGAGTAGGATCAGAAAAGCCTTGCTGCTGTAGTCAGCCATGGAGTTTCTaGGGGAAGGACAACTGTTTA +
Preference number: 4 (lower is better)
Translates to: STIILRVRVGSEKPCCCSQPWSF*GKDNCL
Trigger: TAAACAGTTGTCCTTCCCTCAGAAACTCCATGGCTG...ACTACAGCAGCAAGGCTTTTCTGATCCTACTCTGACTCTCAAGATAATGGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTGGCTCCATTCATCCATaGCCTATGAGGATTAAACCA +
Preference number: 4 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVGSIHP*PMRIKP
Trigger: TGGTTTAATCCTCATAGGTCATGGATGAATGGAGCC...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGCCACTGACTAGACTGTaGAAGGACCCAGAAAGTGCT +
Preference number: 4 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQPLTRL*KDPESA
Trigger: AGCACTTTCTGGGTCCTTTCACAGTCTAGTCAGTGG...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTCGCTGCTGTATATCCTaGAGTTTCTCAACGAACTCA +
Preference number: 4 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVRCCIS*SFSTNS
Trigger: TGAGTTCGTTGAGAAACTGCAGGATATACAGCAGCG...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp GGAAATTGGCCATCTTCTTCTCATCATAGTACAAGAACTTGTGGGTGCTGGCACCGCTGCTGTATATCCTaGAGTTTCTCAACGAACTCA +
Preference number: 4 (lower is better)
Translates to: GNWPSSSHHSTRTCGCWHRCCIS*SFSTNS
Trigger: TGAGTTCGTTGAGAAACTGCAGGATATACAGCAGCG...GTGCCAGCACCCACAAGTTCTTGTACTATGATGAGAAGAAGATGGCCAATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR GCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTTCATTGAGCGTTTGCTaGAGATACAACCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVSLSVC*RYNLSS
Trigger: GGAAGAGAGGTTGTATCTGCAGCAAACGCTCAATGA...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp GATTGTCAAAGTCCACCTGGCTCTGTCTGTCACATGGGTGATGAACAGGGTATGCCGGAGGGAATAAGATaGATCGTTTGTAACCTTTTA +
Preference number: 4 (lower is better)
Translates to: DCQSPPGSVCHMGDEQGMPEGIR*IVCNLL
Trigger: TAAAAGGTTACAAACGATGCATCTTATTCCCTCCGG...CATACCCTGTTCATCACCCATGTGACAGACAGAGCCAGGTGGACTTTGACAATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR GCA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGGAAATTCGACTTCCATaGTCCACCAGTTGCCCTGAC +
Preference number: 4 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQEIRLP*STSCPD
Trigger: GTCAGGGCAACTGGTGGAGCATGGAAGTCGAATTTC...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGCTTCAGTTCTATAGATaGAAAAGCATGCCGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRLQFYR*KSMPGG
Trigger: TCCTCCCGGCATGCTTTTGCATCTATAGAACTGAAG...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTTGCCCATCACCACCCTaGAAAGGGGATATTGGTATC +
Preference number: 4 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSCPSPP*KGDIGI
Trigger: GATACCAATATCCCCTTTGCAGGGTGGTGATGGGCA...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATGAAGGGGTCTCACTATaGTGCCCAAGGTTGGTTCGA +
Preference number: 4 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYEGVSL*CPRLVR
Trigger: TCGAACCAACCTTGGGCAGCATAGTGAGACCCCTTC...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTGTATTTATAGAGAACTaGAGGGAGACTTGGCTTATA +
Preference number: 4 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTVFIEN*RETWLI
Trigger: TATAAGCCAAGTCTCCCTGCAGTTCTCTATAAATAC...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATAAGTACTGTGGAGTCCTaGTCCCTTCTCCATGATTCT +
Preference number: 4 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPISTVES*SLLHDS
Trigger: AGAATCATGGAGAAGGGAGCAGGACTCCACAGTACT...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp AGCACCATTATCTTGAGAGTCAGAGTAGGATCAGAAAAGCCTTGCTGCTGTAGTTGCGTCGAAAAGCAATaGCCTGTCTCAGAAAAGAGC +
Preference number: 4 (lower is better)
Translates to: STIILRVRVGSEKPCCCSCVEKQ*PVSEKS
Trigger: GCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCA...ACTACAGCAGCAAGGCTTTTCTGATCCTACTCTGACTCTCAAGATAATGGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AGCACCATTATCTTGAGAGTCAGAGTAGGATCAGAAAAGCCTTGCTGCTGTAGTCTATTGAGGGTGTTGTaGCACATTACAACGGGGTCT +
Preference number: 4 (lower is better)
Translates to: STIILRVRVGSEKPCCCSLLRVL*HITTGS
Trigger: AGACCCCGTTGTAATGTGCCACAACACCCTCAATAG...ACTACAGCAGCAAGGCTTTTCTGATCCTACTCTGACTCTCAAGATAATGGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGAAAATCAACATAGTTTaGTGGAAAGGAAGGAGCAAG +
Preference number: 4 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMKINIV*WKGRSK
Trigger: CTTGCTCCTTCCTTTCCACCAAACTATGTTGATTTT...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCAGAAATGTTTCCTCTGTaGCAAGCAGAATTTGAGCCT +
Preference number: 4 (lower is better)
Translates to: NGDSNPGVTSKASVLVSAEMFPL*QAEFEP
Trigger: AGGCTCAAATTCTGCTTGCCACAGAGGAAACATTTC...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTCTAAGCAGAAGCTCCTaGGATTTGATAAGGACCAGA +
Preference number: 4 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCLSRSS*DLIRTR
Trigger: TCTGGTCCTTATCAAATCCCAGGAGCTTCTGCTTAG...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTACAGATGCATTTAGATaGAAACCCTCCATGAAGGGG +
Preference number: 4 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCTDAFR*KPSMKG
Trigger: CCCCTTCATGGAGGGTTTCCATCTAAATGCATCTGT...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 72 bp ATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTaGTCAGTGCATCACACAAACCCTTGTGAGAACAAT +
Preference number: 4 (lower is better)
Translates to: IQTQESPPKPLF*SVHHTNPCENN
Trigger: ATTGTTCTCACAAGGGTTTGTGTGATGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CAGATGACTGAGATTGCAGAACAACCAGATATGTTGGTTGGGCCACTGACTAGACACACATTCCGAAGTTaGCAGACTAACATACACACA +
Preference number: 4 (lower is better)
Translates to: QMTEIAEQPDMLVGPLTRHTFRS*QTNIHT
Trigger: TGTGTGTATGTTAGTCTGTCAACTTCGGAATGTGTG...TCTAGTCAGTGGCCCAACCAACATATCTGGTTGTTCTGCAATCTCAGTCATCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTTTCATCCATGACCTATaGGGATTAAACCAAGATGGC +
Preference number: 4 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVFIHDL*GLNQDG
Trigger: GCCATCTTGGTTTAATCCTCATAGGTCATGGATGAA...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATAGTCTGGGTATAAGCTaGCCACTAGGTCCTCTCATC +
Preference number: 4 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYSLGIS*PLGPLI
Trigger: GATGAGAGGACCTAGTGGTCAGCTTATACCCAGACT...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGAACACAAGCATGAGTTaGCACTTATACCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRNTSMS*HLYLCS
Trigger: AGAGCAGAGGTATAAGTGTCAACTCATGCTTGTGTT...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATAACCCATCTTCTTTCTTaGGACTCTCACCTCTTAGCA +
Preference number: 4 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPITHLLS*DSHLLA
Trigger: TGCTAAGAGGTGAGAGTCTCAAGAAAGAAGATGGGT...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAAATCTTCTCAGATGACTaGGATTGCAGAACAACCAGA +
Preference number: 4 (lower is better)
Translates to: FVGSCPKMSVPISISGWQIFSDD*DCRTTR
Trigger: TCTGGTTGTTCTGCAATCTCAGTCATCTGAGAAGAT...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp TTGCCAATATTCTCTTGCAGGTATTCAAGGTCCCATTTCAGGGCAGGATACACACCACGCTTTCCCTGTTaGTTATTAATCCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: LPIFSCRYSRSHFRAGYTPRFPC*LLIQFQ
Trigger: CTGGAACTGGATTAATAAGCAACAGGGAAAGCGTGG...TGTGTATCCTGCCCTGAAATGGGACCTTGAATACCTGCAAGAGAATATTGGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR CCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTCACGATATACAAGTGTaGCCTTATAACCTCTGGTTG +
Preference number: 4 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVHDIQV*PYNLWL
Trigger: CAACCAGAGGTTATAAGGCCACACTTGTATATCGTG...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp CAGATGACTGAGATTGCAGAACAACCAGATATGTTGGTTGGGCCACTGACTAGAAAAGGGTTTTCTTCTTaGGATCTACTGTCTCACCCA +
Preference number: 4 (lower is better)
Translates to: QMTEIAEQPDMLVGPLTRKGFSS*DLLSHP
Trigger: TGGGTGAGACAGTAGATCCCAAGAAGAAAACCCTTT...TCTAGTCAGTGGCCCAACCAACATATCTGGTTGTTCTGCAATCTCAGTCATCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATCTTCTGGGAATCAGATaGCAACCCAGAACCAAGGTC +
Preference number: 4 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYLLGIR*QPRTKV
Trigger: GACCTTGGTTCTGGGTTGCCATCTGATTCCCAGAAG...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTTTTCCTTTACTCTTCTaGGAATCAGATGGCAACCCA +
Preference number: 4 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCFPLLF*ESDGNP
Trigger: TGGGTTGCCATCTGATTCCCAGAAGAGTAAAGGAAA...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTACACACTTTTTAGTTaGCATTACAAAGCAAACCTG +
Preference number: 4 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMYTLFS*HYKANL
Trigger: CAGGTTTGCTTTGTAATGCCAACTAAAAAGTGTGTA...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTCTATCTTTCCAAGTGTaGCTGTGGCCAAGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSLSFQV*LWPSFS
Trigger: GGAAAAACTTGGCCACAGTCACACTTGGAAAGATAG...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGTTATTCATCTGTAAGTaGGAATACCTACCTTGCAGG +
Preference number: 4 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRLFICK*EYLPCR
Trigger: CCTGCAAGGTAGGTATTCTCACTTACAGATGAATAA...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATAAGACTTCCCGTTTCTaGGGTTGTGCCCAACAGAAA +
Preference number: 4 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYKTSRF*GCAQQK
Trigger: TTTCTGTTGGGCACAACCTCAGAAACGGGAAGTCTT...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCACCACTCATATTTTTCTaGATTTTGATTGCCCTTCTC +
Preference number: 4 (lower is better)
Translates to: NGDSNPGVTSKASVLVSAPLIFF*ILIALL
Trigger: GAGAAGGGCAATCAAAATTCAGAAAAATATGAGTGG...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTCCACGCTTTCCCTGTTaGTTATTAATCCAGTTCCAG +
Preference number: 4 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSPRFPC*LLIQFQ
Trigger: CTGGAACTGGATTAATAAGCAACAGGGAAAGCGTGG...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATCCTCACGCCCTACAGTaGTGGAATGTAACAAGTACT +
Preference number: 4 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYPHALQ*WNVTST
Trigger: AGTACTTGTTACATTCCAGCACTGTAGGGCGTGAGG...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTCAGCCATTTATTAAGTaGTTGCCAGGCACTGTGCTA +
Preference number: 4 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSQPFIK*LPGTVL
Trigger: TAGCACAGTGCCTGGCAAGCACTTAATAAATGGCTG...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAAATGCTGGGTAAACGATaGTTCCTAAGAAGAAATGGA +
Preference number: 4 (lower is better)
Translates to: FVGSCPKMSVPISISGWQMLGKR*FLRRNG
Trigger: TCCATTTCTTCTTAGGAAGCATCGTTTACCCAGCAT...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATTTGGGATTACAAGTGTaGACGACTGTGCCTAGCAAC +
Preference number: 4 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYLGLQV*TTVPSN
Trigger: GTTGCTAGGCACAGTCGTGCACACTTGTAATCCCAA...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATATATTCAGGGCCTAACTaGACTTTCTCACAGAAGTCT +
Preference number: 4 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPIYSGPN*TFSQKS
Trigger: AGACTTCTGTGAGAAAGTGCAGTTAGGCCCTGAATA...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGGGAAAAGGTAAGCAGTaGAGAACCTTGGTAAGTAGG +
Preference number: 4 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQGKGKQ*RTLVSR
Trigger: CCTACTTACCAAGGTTCTCCACTGCTTACCTTTTCC...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTACGCAGCCCCATTTTTaGGAAGTTCCCATTCTGAAA +
Preference number: 4 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSTQPHF*EVPILK
Trigger: TTTCAGAATGGGAACTTCCCAAAAATGGGGCTGCGT...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTCTTTCTGATGAGCTTTaGGAGGATATTCAATTCTCT +
Preference number: 4 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVLSDEL*EDIQFS
Trigger: AGAGAATTGAATATCCTCTCAAAGCTCATCAGAAAG...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAACTTATAGCTTGTACCTaGCACTCATCTATTTCTATC +
Preference number: 4 (lower is better)
Translates to: FVGSCPKMSVPISISGWQLIACT*HSSISI
Trigger: GATAGAAATAGATGAGTGTCAGGTACAAGCTATAAG...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGGAATCAAGAGGGGCCTaGTTTGACTGCTATTACATT +
Preference number: 4 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQESRGA*FDCYYI
Trigger: AATGTAATAGCAGTCAAATCAGGCCCCTCTTGATTC...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAACAGAAAAGGGAAATCTaGTGTTACTTGTTCACACTA +
Preference number: 4 (lower is better)
Translates to: FVGSCPKMSVPISISGWQQKREI*CYLFTL
Trigger: TAGTGTGAACAAGTAACATCAGATTTCCCTTTTCTG...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATAATGCTACAAGTTATGTaGTATTTCCTACCCCTCACA +
Preference number: 4 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPIMLQVM*YFLPLT
Trigger: TGTGAGGGGTAGGAAATAGCACATAACTTGTAGCAT...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATTCCTCCGCTCCTCATTaGCTATCATCGTTTAGCTTT +
Preference number: 4 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYSSAPH*LSSFSF
Trigger: AAAGCTAAACGATGATAGGCAATGAGGAGCGGAGGA...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTTGTTACTCTCACAAATaGTCTTCCATATGTCAAGGA +
Preference number: 4 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCCYSHK*SSICQG
Trigger: TCCTTGACATATGGAAGAGCATTTGTGAGAGTAACA...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTAGGATTAAACCAAGATaGCTGAAGACAAGCAGAAGG +
Preference number: 4 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSRIKPR*LKTSRR
Trigger: CCTTCTGCTTGTCTTCAGCCATCTTGGTTTAATCCT...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGTTCTTTCATCAGCTATaGGACTCAAACTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQFFHQL*DSNSWR
Trigger: CCTCCAAGAGTTTGAGTCCCATAGCTGATGAAAGAA...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGATCCTCCCAGGTGTCTaGTCCATATTTGTAATTTTT +
Preference number: 4 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRILPGV*SIFVIF
Trigger: AAAAATTACAAATATGGACCAGACACCTGGGAGGAT...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATAGAGGTAATAAAAACCTaGCCCAAGCTTAGCTTAGAT +
Preference number: 4 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPIEVIKT*PKLSLD
Trigger: ATCTAAGCTAAGCTTGGGCCAGGTTTTTATTACCTC...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 72 bp AGGCATGGACTAAAATTGAATCAAGAGGGGCCTGATTaGACTGCTATTACATTTCATGGTGTGAGGAGACAA +
Preference number: 4 (lower is better)
Translates to: RHGLKLNQEGPD*TAITFHGVRRQ
Trigger: TTGTCTCCTCACACCATGAAATGTAATAGCAGTCAAATCAGGCCCCTCTTGATTCAATTTTAGTCCATGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR TCA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGCTTAAGTTTTTCAGATaGAACCTGGTTGAATGCAGG +
Preference number: 4 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQLKFFR*NLVECR
Trigger: CCTGCATTCAACCAGGTTTCATCTGAAAAACTTAAG...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR GCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTTTGCCAATATTCTCTTaGAGGTATTCAAGGTCCCAT +
Preference number: 4 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSLPIFS*RYSRSH
Trigger: ATGGGACCTTGAATACCTGCAAGAGAATATTGGCAA...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTCTTATGCACAATCATTaGTTCTTATGTCCCAAGGTC +
Preference number: 4 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSLMHNH*FLCPKV
Trigger: GACCTTGGGACATAAGAACCAATGATTGTGCATAAG...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTCAGAGAACCCCAGAATaGGGTACTAAAAATAAACAC +
Preference number: 4 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSQRTPE*GTKNKH
Trigger: GTGTTTATTTTTAGTACCCCATTCTGGGGTTCTCTG...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp AGCACCATTATCTTGAGAGTCAGAGTAGGATCAGAAAAGCCTTGCTGCTGTAGTAAATCCCCCAACCTCTaGTTAATTATTCATCTTCCA +
Preference number: 4 (lower is better)
Translates to: STIILRVRVGSEKPCCCSKSPNL*LIIHLP
Trigger: TGGAAGATGAATAATTAACCAGAGGTTGGGGGATTT...ACTACAGCAGCAAGGCTTTTCTGATCCTACTCTGACTCTCAAGATAATGGTGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp GAAGAAAGAGAAGCTAAGGGGGAAATCCCCCAACCTCTGGTTAATTATTCATCTTGGCCTTATAACCTCTaGTTGCTTCATGTAATTTCT +
Preference number: 4 (lower is better)
Translates to: EEREAKGEIPQPLVNYSSWPYNL*LLHVIS
Trigger: AGAAATTACATGAAGCAACCAGAGGTTATAAGGCCA...AGATGAATAATTAACCAGAGGTTGGGGGATTTCCCCCTTAGCTTCTCTTTCTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CCA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATTTTTCAGATGAAACCTaGTTGAATGCAGGATTGCTG +
Preference number: 4 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYFSDET*LNAGLL
Trigger: CAGCAATCCTGCATTCAACCAGGTTTCATCTGAAAA...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
3UTR CAA 72 bp AGGTATGCAGACTCCACTCTCAACCACTACACTATATaGCACTATATATATTCAAGAGGTAATAAAAACCTG +
Preference number: 4 (lower is better)
Translates to: RYADSTLNHYTI*HYIYSRGNKNL
Trigger: CAGGTTTTTATTACCTCTTGAATATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS GCA 90 bp ACCACAGGCTCCCGGATGATGGCATGGGGTGAGACAGAGAGGGTATaGTCGCACCCAAGTAGTGATGGGAGAAGGCCGGCTGGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: TTGSRMMAWGETERV*SHPSSDGRRPAGLG
Trigger: ACCCAACCCAGCCGGCCTTCTCCCATCACTACTTGGGTGCGAGCATACCCTCTCTGTCTCACCCCATGCCATCATCCGGGAGCCTGTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533589.6
CDS-3UTR CAA 90 bp TCTGGCAGAGGAGCTGGCTTTAAGACGCAAGCCTATGTGTTTGCCCGTGCCCTGAAGCAGTGGAGAACCTaGGTAAGTAGGGAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: SGRGAGFKTQAYVFARALKQWRT*VSREAG
Trigger: GCCAGCCTCCCTACTTACCAAGGTTCTCCACTGCTT...CAGGGCACGGGCAAACACATAGGCTTGCGTCTTAAAGCCAGCTCCTCTGCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS CCA 90 bp TACCCTTCTCAGACCACACAAGCTCACCTGGCTCTGTCTGTCACATaGGTGATGAACAGGGTATGGGTAGAGGCACTCGAACTGATCCGG +
Preference number: 5 (lower is better)
Translates to: YPSQTTQAHLALSVT*VMNRVWVEALELIR
Trigger: CCGGATCAGTTCGAGTGCCTCTACCCATACCCTGTTCATCACCCATGTGACAGACAGAGCCAGGTGAGCTTGTGTGGTCTGAGAAGGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478787.1
CDS-3UTR CAA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCACTGAGGCAGAATTGCTaGAACCTGGAGGAGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPLRQNC*NLEEVE
Trigger: CTCCACCTCCTCCAGGTTCAAGCAATTCTGCCTCAG...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGACCTGGCAGGAGGCCTaGACCCCTGGCAGGCTAGTT +
Preference number: 5 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRTWQEA*TPGRLV
Trigger: AACTAGCCTGCCAGGGGTCAAGGCCTCCTGCCAGGT...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp CTGCACTCCAGCCTGCGTCGAAAAGCAATGCCCTGTCTCAGAAAAGAGCAAACTTGCACTGATGTGGGGTaGTGGGGACATCAACGTTGC +
Preference number: 5 (lower is better)
Translates to: LHSSLRRKAMPCLRKEQTCTDVG*WGHQRC
Trigger: GCAACGTTGATGTCCCCACAACCCCACATCAGTGCA...AGTTTGCTCTTTTCTGAGACAGGGCATTGCTTTTCGACGCAGGCTGGAGTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCATTAGGAAAAAGGGTCTaGGTAAGGAGGCCGCTGGAG +
Preference number: 5 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPLGKRV*VRRPLE
Trigger: CTCCAGCGGCCTCCTTACCAAGACCCTTTTTCCTAA...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp AAGCTTAGGATAGGTCAGGCAGTACTTCCCGGGGGCTCACACTGTACTGTCCCAAGAGGTCAGGCACATTaGGTGACACAGAGCCAAAGA +
Preference number: 5 (lower is better)
Translates to: KLRIGQAVLPGGSHCTVPRGQAH*VTQSQR
Trigger: TCTTTGGCTCTGTGTCACCAAATGTGCCTGACCTCT...TGGGACAGTACAGTGTGAGCCCCCGGGAAGTACTGCCTGACCTATCCTAAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp TCCCGGGGGCTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCATGGGACTCAAACTCTaGGAGGAGTGGAGAGATAGT +
Preference number: 5 (lower is better)
Translates to: SRGLTLYCPTGKGKQWRTMGLKL*EEWRDS
Trigger: ACTATCTCTCCACTCCTCCAAGAGTTTGAGTCCCAT...GGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAGCCCCCGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp TCCCGGGGGCTCACACTGTACTGTCCCACTGGAAAAGGTAAGCAGTGGAGAACCATTGGGAAGCAGTGTTaGTTTTGGACTGCTGGACTG +
Preference number: 5 (lower is better)
Translates to: SRGLTLYCPTGKGKQWRTIGKQC*FWTAGL
Trigger: CAGTCCAGCAGTCCAAAACAAACACTGCTTCCCAAT...GGTTCTCCACTGCTTACCTTTTCCAGTGGGACAGTACAGTGTGAGCCCCCGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCTCGTCTCCTGCATCCTaGTGCACATCCCAGGGTCTC +
Preference number: 5 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLSSPAS*CTSQGL
Trigger: GAGACCCTGGGATGTGCACAAGGATGCAGGAGACGA...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp ACACGCACGCACACACACACACACACCCAGAGGCTTGCACCCCTAGTGTGGATAGAACAACCAGATATGTaGGTTGGGCCACTGACTAGA +
Preference number: 5 (lower is better)
Translates to: TRTHTHTHTQRLAPLVWIEQPDM*VGPLTR
Trigger: TCTAGTCAGTGGCCCAACCAACATATCTGGTTGTTC...TATCCACACTAGGGGTGCAAGCCTCTGGGTGTGTGTGTGTGTGTGCGTGCGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCCTGAGGCAGGACTGCTaGAGCCCAGGTGTTCGAGAT +
Preference number: 5 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLLRQDC*SPGVRD
Trigger: ATCTCGAACACCTGGGCTCAAGCAGTCCTGCCTCAG...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGATATTCTGCACCATCTaGGGCTGGGTCTGCCTTCAG +
Preference number: 5 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMIFCTI*GWVCLQ
Trigger: CTGAAGGCAGACCCAGCCCAAGATGGTGCAGAATAT...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp ACACGCACGCACACACACACACACACCCAGAGGCTTGCACCCCTAGTGTGGATAGAATGTAACAAGTACTaGTCACAGGTGGGCTATGAG +
Preference number: 5 (lower is better)
Translates to: TRTHTHTHTQRLAPLVWIECNKY*SQVGYE
Trigger: CTCATAGCCCACCTGTGACAAGTACTTGTTACATTC...TATCCACACTAGGGGTGCAAGCCTCTGGGTGTGTGTGTGTGTGTGCGTGCGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp AAGCTTAGGATAGGTCAGGCAGTACTTCCCGGGGGCTCACACTGTACTGTCCCACCAAAGCCTCTGTTCTaGTCAGTGCATCACACAAAC +
Preference number: 5 (lower is better)
Translates to: KLRIGQAVLPGGSHCTVPPKPLF*SVHHTN
Trigger: GTTTGTGTGATGCACTGACAAGAACAGAGGCTTTGG...TGGGACAGTACAGTGTGAGCCCCCGGGAAGTACTGCCTGACCTATCCTAAGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp TCCAAGTGTGACTGTGGCCAAGTTTTTCCTCCGCTCCTGTGCTCCTCTTTCCCAAAGCCTCCCAAAGTGTaGGGATTACAAGTGTGCACG +
Preference number: 5 (lower is better)
Translates to: SKCDCGQVFPPLLCSSFPKPPKV*GLQVCT
Trigger: CGTGCACACTTGTAATCCCAACACTTTGGGAGGCTT...TGGGAAAGAGGAGCACAGGAGCGGAGGAAAAACTTGGCCACAGTCACACTTGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGCAGGATACACAAGATTaGTGTCGGTCAGCACCACAG +
Preference number: 5 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMQDTQD*CRSAPQ
Trigger: CTGTGGTGCTGACCGACACAAATCTTGTGTATCCTG...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp TGTCAAAGTCCACCTGGCTCTGTCTGTCACATGGGTGATGAACAGGGTATGGGTCAGGATACACAAGATTaGTGTCGGTCAGCACCACAG +
Preference number: 5 (lower is better)
Translates to: CQSPPGSVCHMGDEQGMGQDTQD*CRSAPQ
Trigger: CTGTGGTGCTGACCGACACAAATCTTGTGTATCCTG...ACCCATACCCTGTTCATCACCCATGTGACAGACAGAGCCAGGTGGACTTTGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR CAA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTGCTGAGGCACTGAGGTaGCAGGAGATAGGGCTGAGA +
Preference number: 5 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVAEALR*QEIGLR
Trigger: TCTCAGCCCTATCTCCTGCAACCTCAGTGCCTCAGC...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAAGCTAGGAGAACTCCCTaGGTACCCAGCATAGGGGCA +
Preference number: 5 (lower is better)
Translates to: FVGSCPKMSVPISISGWQARRTP*VPSIGA
Trigger: TGCCCCTATGCTGGGTACCAAGGGAGTTCTCCTAGC...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp ACACGCACGCACACACACACACACACCCAGAGGCTTGCACCCCTAGTGTGGATACAAGAGGGGCCTGATTaGACTGCTATTACATTTCAT +
Preference number: 5 (lower is better)
Translates to: TRTHTHTHTQRLAPLVWIQEGPD*TAITFH
Trigger: ATGAAATGTAATAGCAGTCAAATCAGGCCCCTCTTG...TATCCACACTAGGGGTGCAAGCCTCTGGGTGTGTGTGTGTGTGTGCGTGCGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGAGTGTCATTGAGCGTTaGCTGCAGATACAACCTCTC +
Preference number: 5 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMSVIER*LQIQPL
Trigger: GAGAGGTTGTATCTGCAGCAAACGCTCAATGACACT...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp AGCAGGTTAGAGGTAAGCTGCCCCCAGCCACGCTTTCCCTGTTGCTTATTAATCGCCACGCTTTCCCTGTaGCTTATTAATCCAGTTCCA +
Preference number: 5 (lower is better)
Translates to: SRLEVSCPQPRFPCCLLIATLSL*LINPVP
Trigger: TGGAACTGGATTAATAAGCAACAGGGAAAGCGTGGC...GATTAATAAGCAACAGGGAAAGCGTGGCTGGGGGCAGCTTACCTCTAACCTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR CAA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCAAGCCTGGGTAGAGCTTaGCTCTCTACTGGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: NGDSNPGVTSKASVLVSASLGRA*LSTGFL
Trigger: GAGGAAACCAGTAGAGAGCAAAGCTCTACCCAGGCT...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp CTCATCCTATTACTGAACCTCAGCACTGTTTACACATCTGGCCTCAGAGGCCTCCGCATTCCTTCATCCTaGGATCCTCTAAGGCACTCA +
Preference number: 5 (lower is better)
Translates to: LILLLNLSTVYTSGLRGLRIPSS*DPLRHS
Trigger: TGAGTGCCTTAGAGGATCCAAGGATGAAGGAATGCG...GAGGCCTCTGAGGCCAGATGTGTAAACAGTGCTGAGGTTCAGTAATAGGATGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAAGAGGCTGAGGCAGAATaGCTTGAACCTGGAGGAGGT +
Preference number: 5 (lower is better)
Translates to: FVGSCPKMSVPISISGWQEAEAE*LEPGGG
Trigger: ACCTCCTCCAGGTTCAAGCAATTCTGCCTCAGCCTC...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp TCTGGCAGAGGAGCTGGCTTTAAGACGCAAGCCTATGTGTTTGCCCGTGCCCTGATTGCTGTAACAACTTaGACTTCTGGTCACAATTCC +
Preference number: 5 (lower is better)
Translates to: SGRGAGFKTQAYVFARALIAVTT*TSGHNS
Trigger: GGAATTGTGACCAGAAGTCAAAGTTGTTACAGCAAT...CAGGGCACGGGCAAACACATAGGCTTGCGTCTTAAAGCCAGCTCCTCTGCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp AGACTGAGCCCTTGCTATGGACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTTCATTTCTTCCCTGTaGGACCTCGGCTTAAAGTTC +
Preference number: 5 (lower is better)
Translates to: RLSPCYGPVILLSLTLTMFISSL*DLGLKF
Trigger: GAACTTTAAGCCGAGGTCCAACAGGGAAGAAATGAA...CATTGTCAGGGTAAGGCTTAGCAGAATGACCGGTCCATAGCAAGGGCTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp ATTGTCAAAGTCCACCTGGCTCTGTCTGTCACATGGGTGATGAACAGGGTATGGAGTGTCATTGAGCGTTaGCTGCAGATACAACCTCTC +
Preference number: 5 (lower is better)
Translates to: IVKVHLALSVTWVMNRVWSVIER*LQIQPL
Trigger: GAGAGGTTGTATCTGCAGCAAACGCTCAATGACACT...CCATACCCTGTTCATCACCCATGTGACAGACAGAGCCAGGTGGACTTTGACAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR CAA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTCAACAGTCCCTAATCTaGTCCACACAGGGTGCACGA +
Preference number: 5 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCQQSLI*STQGAR
Trigger: TCGTGCACCCTGTGTGGACAAGATTAGGGACTGTTG...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGGAACTGCAGGGAGACTaGGCTTATAGTGAGGAGGAG +
Preference number: 5 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRELQGD*AYSEEE
Trigger: CTCCTCCTCACTATAAGCCAAGTCTCCCTGCAGTTC...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCAAGAAAGACTGAGCCCTaGCTATGGACCGGTCATTCT +
Preference number: 5 (lower is better)
Translates to: NGDSNPGVTSKASVLVSARKTEP*LWTGHS
Trigger: AGAATGACCGGTCCATAGCAAGGGCTCAGTCTTTCT...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS TCA 90 bp ACATCTGGTGGCCACTCCAGGGAGCCTGGAATATGTGAGCTACAATaGAATTACCCTCTTGGTGTGTTAAGGCAAGAACAGCCTGTAATC +
Preference number: 5 (lower is better)
Translates to: TSGGHSREPGICELQ*NYPLGVLRQEQPVI
Trigger: GATTACAGGCTGTTCTTGCCTTAACACACCAAGAGGGTAATTTCATTGTAGCTCACATATTCCAGGCTCCCTGGAGTGGCCACCAGATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478787.1
CDS-3UTR CAA 90 bp AGAGGCACTCGAACTGATCCGGAGGGAATAAGATGCATCGTTTGTAACCTTTTACTGCCCACAGTGTCATaGAGCGTTTGCTGCAGATAC +
Preference number: 5 (lower is better)
Translates to: RGTRTDPEGIRCIVCNLLLPTVS*SVCCRY
Trigger: GTATCTGCAGCAAACGCTCAATGACACTGTGGGCAG...TAAAAGGTTACAAACGATGCATCTTATTCCCTCCGGATCAGTTCGAGTGCCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR CAA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGATGAGCTGCCTGGGCTaGACCCCATTTCATCTATTC +
Preference number: 5 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRMSCLG*TPFHLF
Trigger: GAATAGATGAAATGGGGTCAAGCCCAGGCAGCTCAT...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGGACGCAGCCCCATTTTaGGGAAGTTCCCATTCTGAA +
Preference number: 5 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRDAAPF*GSSHSE
Trigger: TTCAGAATGGGAACTTCCCAAAAATGGGGCTGCGTC...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTCCTGCAAAGGGGATATaGGTATCTCCTTCTGACAGC +
Preference number: 5 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVPAKGI*VSPSDS
Trigger: GCTGTCAGAAGGAGATACCAATATCCCCTTTGCAGG...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTCAGGGTTTCACCATGTaGGCCAGGATAGTCTCAAAC +
Preference number: 5 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCQGFTM*ARIVSN
Trigger: GTTTGAGACTATCCTGGCCAACATGGTGAAACCCTG...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCACACCCATCTTCTTTCTaGAGACTCTCACCTCTTAGC +
Preference number: 5 (lower is better)
Translates to: NGDSNPGVTSKASVLVSAHPSSF*RLSPLS
Trigger: GCTAAGAGGTGAGAGTCTCAAGAAAGAAGATGGGTG...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp AAGAAGTCCATGACAATCTTCCTGCCCACAGTGTCATTGAGCGTTTGCTGCAGATTCATTTCTTCCCTGTaGGACCTCGGCTTAAAGTTC +
Preference number: 5 (lower is better)
Translates to: KKSMTIFLPTVSLSVCCRFISSL*DLGLKF
Trigger: GAACTTTAAGCCGAGGTCCAACAGGGAAGAAATGAA...TCTGCAGCAAACGCTCAATGACACTGTGGGCAGGAAGATTGTCATGGACTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR CAA 90 bp AATGGTGATTCAAACCCAGGAGTCACCTCCAAAGCCTCTGTTCTTGTCAGTGCACCATTTATTAAGTGCTaGCCAGGCACTGTGCTAAAG +
Preference number: 5 (lower is better)
Translates to: NGDSNPGVTSKASVLVSAPFIKC*PGTVLK
Trigger: CTTTAGCACAGTGCCTGGCAAGCACTTAATAAATGG...TGCACTGACAAGAACAGAGGCTTTGGAGGTGACTCCTGGGTTTGAATCACCATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp CAGATGACTGAGATTGCAGAACAACCAGATATGTTGGTTGGGCCACTGACTAGACAAAGGGTTTTCTTCTaGGGATCTACTGTCTCACCC +
Preference number: 5 (lower is better)
Translates to: QMTEIAEQPDMLVGPLTRQRVFF*GSTVSP
Trigger: GGGTGAGACAGTAGATCCCAAGAAGAAAACCCTTTG...TCTAGTCAGTGGCCCAACCAACATATCTGGTTGTTCTGCAATCTCAGTCATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp CAGATGACTGAGATTGCAGAACAACCAGATATGTTGGTTGGGCCACTGACTAGAACAGAGAAGTCTCCATaGCCAATATTCTCTTGCAGG +
Preference number: 5 (lower is better)
Translates to: QMTEIAEQPDMLVGPLTRTEKSP*PIFSCR
Trigger: CCTGCAAGAGAATATTGGCAATGGAGACTTCTCTGT...TCTAGTCAGTGGCCCAACCAACATATCTGGTTGTTCTGCAATCTCAGTCATCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATCTGCCCACAGTGTCATaGAGCGTTTGCTGCAGATAC +
Preference number: 5 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYLPTVS*SVCCRY
Trigger: GTATCTGCAGCAAACGCTCAATGACACTGTGGGCAG...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATAGCCACGCTTTCCCTGTaGCTTATTAATCCAGTTCCA +
Preference number: 5 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPIATLSL*LINPVP
Trigger: TGGAACTGGATTAATAAGCAACAGGGAAAGCGTGGC...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTAGAAGCTCCTGGGATTaGATAAGGACCAGATTTTCC +
Preference number: 5 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVRSSWD*IRTRFS
Trigger: GGAAAATCTGGTCCTTATCAAATCCCAGGAGCTTCT...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp CTTCTGACTGTGCTGCTGGCTCATACAAACCTTCAATGCCTCTTTAGGAACTGTATTCTGTACCAGATTTaGAAGGGTGGAAGACCCAGA +
Preference number: 5 (lower is better)
Translates to: LLTVLLAHTNLQCLFRNCILYQI*KGGRPR
Trigger: TCTGGGTCTTCCACCCTTCAAAATCTGGTACAGAAT...ACAGTTCCTAAAGAGGCATTGAAGGTTTGTATGAGCCAGCAGCACAGTCAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp AGCACCATTATCTTGAGAGTCAGAGTAGGATCAGAAAAGCCTTGCTGCTGTAGTGGGCAGTTTGTCCATTaGCCCAAAGTCATGCAGAAT +
Preference number: 5 (lower is better)
Translates to: STIILRVRVGSEKPCCCSGQFVH*PKVMQN
Trigger: ATTCTGCATGACTTTGGGCAAATGGACAAACTGCCC...ACTACAGCAGCAAGGCTTTTCTGATCCTACTCTGACTCTCAAGATAATGGTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp AACTTGTGGGTGCTGGCACTGTACACAGAGAAGTCTCCATTGCCAATATTCTCTATTGCCAATATTCTCTaGCAGGTATTCAAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: NLWVLALYTEKSPLPIFSIANIL*QVFKVP
Trigger: TGGGACCTTGAATACCTGCAAGAGAATATTGGCAAT...AGAGAATATTGGCAATGGAGACTTCTCTGTGTACAGTGCCAGCACCCACAAGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS-3UTR CAA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATAAGGCATGGACTAAAATaGAATCAAGAGGGGCCTGAT +
Preference number: 5 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPIRHGLK*NQEGPD
Trigger: ATCAGGCCCCTCTTGATTCAATTTTAGTCCATGCCT...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp ACCAGAGAGAGGGATCCTAAAGACAAGTCTATTCACACTTGCAGCCATGGAGTTCTTCCACATATCAGCTaGGACTTATCACTTTCTGCA +
Preference number: 5 (lower is better)
Translates to: TRERDPKDKSIHTCSHGVLPHIS*DLSLSA
Trigger: TGCAGAAAGTGATAAGTCCAAGCTGATATGTGGAAG...AACTCCATGGCTGCAAGTGTGAATAGACTTGTCTTTAGGATCCCTCTCTCTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGCAAGTTTCGGGCAGTTaGTCCATTTGCCCAAAGTCA +
Preference number: 5 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQQVSGS*SICPKS
Trigger: TGACTTTGGGCAAATGGACAAACTGCCCGAAACTTG...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATTGTCCTTTTATCTCCTaGGGGAGCAGCAGCTCCAAT +
Preference number: 5 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYCPFIS*GSSSSN
Trigger: ATTGGAGCTGCTGCTCCCCAAGGAGATAAAAGGACA...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGCCCAGAAAGTGCTATTaGTGGCCTCATAAAGCCCTA +
Preference number: 5 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQPRKCY*WPHKAL
Trigger: TAGGGCTTTATGAGGCCACAAATAGCACTTTCTGGG...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGGCCACTGCATGTATTTaGGAGGTTATCTTCTCAGAT +
Preference number: 5 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRATACI*EVIFSD
Trigger: ATCTGAGAAGATAACCTCCAAAATACATGCAGTGGC...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp ACCGGTCATTCTGCTAAGCCTTACCCTGACAATGTAAATGATGTCTTCCCCATAATTGCCAATATTCTCTaGCAGGTATTCAAGGTCCCA +
Preference number: 5 (lower is better)
Translates to: TGHSAKPYPDNVNDVFPIIANIL*QVFKVP
Trigger: TGGGACCTTGAATACCTGCAAGAGAATATTGGCAAT...TATGGGGAAGACATCATTTACATTGTCAGGGTAAGGCTTAGCAGAATGACCGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp CAGATGACTGAGATTGCAGAACAACCAGATATGTTGGTTGGGCCACTGACTAGAACTTATGCACAATCATaGGTTCTTATGTCCCAAGGT +
Preference number: 5 (lower is better)
Translates to: QMTEIAEQPDMLVGPLTRTYAQS*VLMSQG
Trigger: ACCTTGGGACATAAGAACCAATGATTGTGCATAAGT...TCTAGTCAGTGGCCCAACCAACATATCTGGTTGTTCTGCAATCTCAGTCATCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGTTGAAAGAGCTACACTaGAGAAGGTACCATATCTTC +
Preference number: 5 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRLKELH*RRYHIF
Trigger: GAAGATATGGTACCTTCTCAAGTGTAGCTCTTTCAA...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp CCTCTGTGGCAAGCAGAATTTGAGCCTAAACATCCCTCAAAAGGTAATCGAAGGGAAAATCAACATAGTTaGGTGGAAAGGAAGGAGCAA +
Preference number: 5 (lower is better)
Translates to: PLWQAEFEPKHPSKGNRRENQHS*VERKEQ
Trigger: TTGCTCCTTCCTTTCCACCAAACTATGTTGATTTTC...CCTTCGATTACCTTTTGAGGGATGTTTAGGCTCAAATTCTGCTTGCCACAGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGAGTTTTTCCAAGACTTaGTTAGCAGGAGCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQSFSKT*LAGAQK
Trigger: CTTCTGGGCTCCTGCTAACAAAGTCTTGGAAAAACT...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp TTTGTTGGCTCATGCCCAAAGATGTCTGTTCCTATATCCATCTCAGGCTGGCAACATCTATTTCTATCTTaGTTGGCTCATGCCCAAAGA +
Preference number: 5 (lower is better)
Translates to: FVGSCPKMSVPISISGWQHLFLS*LAHAQR
Trigger: TCTTTGGGCATGAGCCAACAAAGATAGAAATAGATG...TTGCCAGCCTGAGATGGATATAGGAACAGACATCTTTGGGCATGAGCCAACAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGCTAAGACATGCACAGTaGAGTCCTCCTGTTTATGCT +
Preference number: 5 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQLRHAQ*SPPVYA
Trigger: AGCATAAACAGGAGGACTCAACTGTGCATGTCTTAG...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp AAGAACACACAGCAGACACAAAACAAGAGGACTAGCCATGGGCAAAATAAACAGAATCAGGAATCACTCTaGTGTTACCCAAGGATCAAG +
Preference number: 5 (lower is better)
Translates to: KNTQQTQNKRTSHGQNKQNQESL*CYPRIK
Trigger: CTTGATCCTTGGGTAACACAAGAGTGATTCCTGATT...CTGTTTATTTTGCCCATGGCTAGTCCTCTTGTTTTGTGTCTGCTGTGTGTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS-3UTR CAA 90 bp GATCCAGGTATGCAGACTCCACTCTCAACCACTACACTATATTGCACTATATATTCAAGCACCATTATCTaGAGAGTCAGAGTAGGATCA +
Preference number: 5 (lower is better)
Translates to: DPGMQTPLSTTTLYCTIYSSTII*RVRVGS
Trigger: TGATCCTACTCTGACTCTCAAGATAATGGTGCTTGA...ATATATAGTGCAATATAGTGTAGTGGTTGAGAGTGGAGTCTGCATACCTGGATC
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS GCA 72 bp CAGCACCACAGGCTCCTCATTCTCAATAAGCTCCTCTaGCCGGGGGTCGCTCTGACTCAGACGCGGAATGGG +
Preference number: 6 (lower is better)
Translates to: QHHRLLILNKLL*PGVALTQTRNG
Trigger: CCCATTCCGCGTCTGAGTCAGAGCGACCCCCGGGCAGAGGAGCTTATTGAGAATGAGGAGCCTGTGGTGCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS CAA 72 bp GGTGTGGACGGGATAGCAGTCACCTGGCAGGAGGCCTaGACCCCTGGCAGGCTAGTTGTATCGGCCCTTGAT +
Preference number: 6 (lower is better)
Translates to: GVDGIAVTWQEA*TPGRLVVSALD
Trigger: ATCAAGGGCCGATACAACTAGCCTGCCAGGGGTCAAGGCCTCCTGCCAGGTGACTGCTATCCCGTCCACACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS GCA 72 bp TCCCGGATGATGGCATGGGGTGAGACAGAGAGGGTATaGTCGCACCCAAGTAGTGATGGGAGAAGGCCGGCT +
Preference number: 6 (lower is better)
Translates to: SRMMAWGETERV*SHPSSDGRRPA
Trigger: AGCCGGCCTTCTCCCATCACTACTTGGGTGCGAGCATACCCTCTCTGTCTCACCCCATGCCATCATCCGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000533589.6
CDS CAA 90 bp TCGCACCCAAGTAGTGATGGGAGAAGGCCGGCTGGGTTGGGTGGCTaGACTGTGACCCTTTTTCCCGAACCTTCTCGTGACCCCTCAGAG +
Preference number: 6 (lower is better)
Translates to: SHPSSDGRRPAGLGG*TVTLFPEPSRDPSE
Trigger: CTCTGAGGGGTCACGAGAAGGTTCGGGAAAAAGGGTCACAGTCAAGCCACCCAACCCAGCCGGCCTTCTCCCATCACTACTTGGGTGCGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000533589.6
CDS CAA 90 bp AGGGTATGCTCGCACCCAAGTAGTGATGGGAGAAGGCCGGCTGGGTaGGGTGGCTTGACTGTGACCCTTTTTCCCGAACCTTCTCGTGAC +
Preference number: 6 (lower is better)
Translates to: RVCSHPSSDGRRPAG*GGLTVTLFPEPSRD
Trigger: GTCACGAGAAGGTTCGGGAAAAAGGGTCACAGTCAAGCCACCCAACCCAGCCGGCCTTCTCCCATCACTACTTGGGTGCGAGCATACCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533589.6
CDS TCA 72 bp TCATTCTCAATAAGCTCCTCTGCCCGGGGGTCGCTCTaGCTCAGACGCGGAATGGGCCTAGTCGGGAAGCTA +
Preference number: 6 (lower is better)
Translates to: SFSISSSARGSL*LRRGMGLVGKL
Trigger: TAGCTTCCCGACTAGGCCCATTCCGCGTCTGAGTCAGAGCGACCCCCGGGCAGAGGAGCTTATTGAGAATGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS CAA 72 bp TCGCACCCAAGTAGTGATGGGAGAAGGCCGGCTGGGTaGGGTGGCTTGACTGTGACCCTTTTTCCCGAACCT +
Preference number: 6 (lower is better)
Translates to: SHPSSDGRRPAG*GGLTVTLFPEP
Trigger: AGGTTCGGGAAAAAGGGTCACAGTCAAGCCACCCAACCCAGCCGGCCTTCTCCCATCACTACTTGGGTGCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000533589.6
CDS CAA 90 bp CTTGCAGGTATTCAAGGTCCCATTTCAGGGCAGGATACACAAGATTaGTGTCGGTCAGCACCACAGGCTCTGGGATTCATCCCAGGCGGG +
Preference number: 6 (lower is better)
Translates to: LAGIQGPISGQDTQD*CRSAPQALGFIPGG
Trigger: CCCGCCTGGGATGAATCCCAGAGCCTGTGGTGCTGACCGACACAAATCTTGTGTATCCTGCCCTGAAATGGGACCTTGAATACCTGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS CCA 72 bp CAGACCACACAAGCTCACCTGGCTCTGTCTGTCACATaGGTGATGAACAGGGTATGGGTAGAGGCACTCGAA +
Preference number: 6 (lower is better)
Translates to: QTTQAHLALSVT*VMNRVWVEALE
Trigger: TTCGAGTGCCTCTACCCATACCCTGTTCATCACCCATGTGACAGACAGAGCCAGGTGAGCTTGTGTGGTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000478787.1
CDS CCA 72 bp GGTGTGTTAAGGCAAGAACAGCCTGTAATCCGAACCTaGCATATCACTACGGGGAAGGGGAAAGACATTCCA +
Preference number: 6 (lower is better)
Translates to: GVLRQEQPVIRT*HITTGKGKDIP
Trigger: TGGAATGTCTTTCCCCTTCCCCGTAGTGATATGCCAGGTTCGGATTACAGGCTGTTCTTGCCTTAACACACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000478787.1
CDS CAA 72 bp ATTCAAGGTCCCATTTCAGGGCAGGATACACAAGATTaGTGTCGGTCAGCACCACAGGCTCTGGGATTCATC +
Preference number: 6 (lower is better)
Translates to: IQGPISGQDTQD*CRSAPQALGFI
Trigger: GATGAATCCCAGAGCCTGTGGTGCTGACCGACACAAATCTTGTGTATCCTGCCCTGAAATGGGACCTTGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526476.5
CDS CAA 72 bp ATTCAAGGTCCCATTTCAGGGCAGGATACACAAGATTaGTGTCGGTCAGCACCACAGGCTCCTCATTCTCAA +
Preference number: 6 (lower is better)
Translates to: IQGPISGQDTQD*CRSAPQAPHSQ
Trigger: TTGAGAATGAGGAGCCTGTGGTGCTGACCGACACAAATCTTGTGTATCCTGCCCTGAAATGGGACCTTGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299163.7
CDS CAA 90 bp AAGAACATCACCAGGGCCAACCACTGTTTCGTAACCAACCACATTTaGGAAATTAGGGAACCTCTCGTAGTCGGGATTGTCAAAGTCCAC +
Preference number: 6 (lower is better)
Translates to: KNITRANHCFVTNHI*EIREPLVVGIVKVH
Trigger: GTGGACTTTGACAATCCCGACTACGAGAGGTTCCCTAATTTCCAAAATGTGGTTGGTTACGAAACAGTGGTTGGCCCTGGTGATGTTCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000299163.7
ENST00000533589.6