RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HID1 (Homo sapiens)

Ensembl gene IDs: ENSG00000167861

Ensembl transcript IDs: ENST00000318565.11, ENST00000425042.7, ENST00000525128.5, ENST00000528902.1, ENST00000530857.1, ENST00000530904.5, ENST00000532395.5, ENST00000532894.1, ENST00000532900.5, ENST00000534480.5, ENST00000578002.1, ENST00000579818.1, ENST00000581676.1, ENST00000583244.1

Found 503 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTGGGCTCCACTGCCCACTGGCTGATGAGGTGGACGGTCGCCGCTaGTCCCTCCATGCCTGGCTGGGCTCCCCCTTAGCCGGGCTGCCA +
Preference number: 1 (lower is better)
Translates to: VGLHCPLADEVDGRR*SLHAWLGSPLAGLP
Trigger: TGGCAGCCCGGCTAAGGGGGAGCCCAGCCAGGCATGGAGGGAGCAGCGGCGACCGTCCACCTCATCAGCCAGTGGGCAGTGGAGCCCAAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 90 bp AGGGCTCAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTaGGCGGGTCCGTGGGCAGGTTGGCCAGCTGGTGGAAGATGCTGC +
Preference number: 1 (lower is better)
Translates to: RAQVSAGAAAGPCEW*AGPWAGWPAGGRCC
Trigger: GCAGCATCTTCCACCAGCTGGCCAACCTGCCCACGGACCCGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTGAGCCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 90 bp ACAAGGGCTCAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATaGTGGGCGGGTCCGTGGGCAGGTTGGCCAGCTGGTGGAAGATGC +
Preference number: 1 (lower is better)
Translates to: TRAQVSAGAAAGPCE*WAGPWAGWPAGGRC
Trigger: GCATCTTCCACCAGCTGGCCAACCTGCCCACGGACCCGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTGAGCCCTTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR GCA 90 bp AATGCCTGGAGTAGCCACCAGACTGGTCTTGAGGGTGCCTGGCTCTaGAGGGGCAGCGGGGCGGGAGCCCTCCATGGAGGTGCCCTCCTG +
Preference number: 1 (lower is better)
Translates to: NAWSSHQTGLEGAWL*RGSGAGALHGGALL
Trigger: CAGGAGGGCACCTCCATGGAGGGCTCCCGCCCCGCTGCCCCTGCAGAGCCAGGCACCCTCAAGACCAGTCTGGTGGCTACTCCAGGCATT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR GCA 90 bp GCCTGGCTGGGCTCCCCCTTAGCCGGGCTGCCATCCTCCAAGCTCTaGTGGGGCTCAGGTTCCAGGGACCGCAAGGTGCCATCCTCTGAC +
Preference number: 1 (lower is better)
Translates to: AWLGSPLAGLPSSKL*WGSGSRDRKVPSSD
Trigger: GTCAGAGGATGGCACCTTGCGGTCCCTGGAACCTGAGCCCCAGCAGAGCTTGGAGGATGGCAGCCCGGCTAAGGGGGAGCCCAGCCAGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 90 bp ACTTCCAGGAGAGGACCCACTCTGGCGTTGGGCTCCACTGCCCACTaGCTGATGAGGTGGACGGTCGCCGCTGCTCCCTCCATGCCTGGC +
Preference number: 1 (lower is better)
Translates to: TSRRGPTLALGSTAH*LMRWTVAAAPSMPG
Trigger: GCCAGGCATGGAGGGAGCAGCGGCGACCGTCCACCTCATCAGCCAGTGGGCAGTGGAGCCCAACGCCAGAGTGGGTCCTCTCCTGGAAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 90 bp ATGGCAGTGCCCGAGTTGGCCTGGTACTTGCGGATGAGGATGGGGTaGGGCACGGGCAGCAGCCCCACCAGGGTGCCATGCTGCAGGAAC +
Preference number: 1 (lower is better)
Translates to: MAVPELAWYLRMRMG*GTGSSPTRVPCCRN
Trigger: GTTCCTGCAGCATGGCACCCTGGTGGGGCTGCTGCCCGTGCCCCACCCCATCCTCATCCGCAAGTACCAGGCCAACTCGGGCACTGCCAT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 90 bp GGTTCTCAGGGCCTGGAGGATCGGCATCATCCATGGCGGTGCCAGTaGTGGTGCCGTCCACAGTGGGGCTGGCACTGCTGGCACTGTCGT +
Preference number: 1 (lower is better)
Translates to: GSQGLEDRHHPWRCQ*WCRPQWGWHCWHCR
Trigger: ACGACAGTGCCAGCAGTGCCAGCCCCACTGTGGACGGCACCACCACTGGCACCGCCATGGATGATGCCGATCCTCCAGGCCCTGAGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR GCA 90 bp AGCTTCGACTTCCAGGAGAGGACCCACTCTGGCGTTGGGCTCCACTaGCCACTGGCTGATGAGGTGGACGGTCGCCGCTGCTCCCTCCAT +
Preference number: 1 (lower is better)
Translates to: SFDFQERTHSGVGLH*PLADEVDGRRCSLH
Trigger: ATGGAGGGAGCAGCGGCGACCGTCCACCTCATCAGCCAGTGGGCAGTGGAGCCCAACGCCAGAGTGGGTCCTCTCCTGGAAGTCGAAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR TCA 90 bp GGCGTGGGTCCCTGTGAAGACTGGGATGTCCATGGGCACGCGGATTaGGTAGGGTTTGTTCAGCCGCACCCCGAAGTTCCGCTCCCCGCT +
Preference number: 1 (lower is better)
Translates to: GVGPCEDWDVHGHAD*VGFVQPHPEVPLPA
Trigger: AGCGGGGAGCGGAACTTCGGGGTGCGGCTGAACAAACCCTACTCAATCCGCGTGCCCATGGACATCCCAGTCTTCACAGGGACCCACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR TCA 90 bp CAAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTaGCCCATTGGCTTCTGCCTCTGGGGCTGGGTAGCACAGGAGTGG +
Preference number: 1 (lower is better)
Translates to: QGTARGSLVKPLRAQ*PIGFCLWGWVAQEW
Trigger: CCACTCCTGTGCTACCCAGCCCCAGAGGCAGAAGCCAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR TCA 90 bp TCAGCCGCACCCCGAAGTTCCGCTCCCCGCTCAGAAGCAGCAAGATaGAGACACCAATGTGCATCAGGCCCACCCGAGACTGATCGGCCC +
Preference number: 1 (lower is better)
Translates to: SAAPRSSAPRSEAAR*RHQCASGPPETDRP
Trigger: GGGCCGATCAGTCTCGGGTGGGCCTGATGCACATTGGTGTCTTCATCTTGCTGCTTCTGAGCGGGGAGCGGAACTTCGGGGTGCGGCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR TCA 90 bp GCTCTGCTGGGGCTCAGGTTCCAGGGACCGCAAGGTGCCATCCTCTaGCACCTGGGACTTCTCGGTCAGCTTGTCAATGCCTGGAGTAGC +
Preference number: 1 (lower is better)
Translates to: ALLGLRFQGPQGAIL*HLGLLGQLVNAWSS
Trigger: GCTACTCCAGGCATTGACAAGCTGACCGAGAAGTCCCAGGTGTCAGAGGATGGCACCTTGCGGTCCCTGGAACCTGAGCCCCAGCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR GCA 90 bp GGGGACACGTTGACCACGATGGTGAGCAGGCAGTCGAAGAGGGGCTaGAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACA +
Preference number: 1 (lower is better)
Translates to: GDTLTTMVSRQSKRG*NRWCPLVMILWNTT
Trigger: TGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTGCCTGCTCACCATCGTGGTCAACGTGTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR GCA 90 bp TTCTCCACCTGCGGAACCAGCACCTGCAGCAGCCTCATGATGGTCTaGAGCGGCAGCTTCGACTTCCAGGAGAGGACCCACTCTGGCGTT +
Preference number: 1 (lower is better)
Translates to: FSTCGTSTCSSLMMV*SGSFDFQERTHSGV
Trigger: AACGCCAGAGTGGGTCCTCTCCTGGAAGTCGAAGCTGCCGCTGCAGACCATCATGAGGCTGCTGCAGGTGCTGGTTCCGCAGGTGGAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 90 bp CCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTaGTCAAACCCCTTAGGGCACAGTGACCCATTGGCTTCTGCCTCT +
Preference number: 1 (lower is better)
Translates to: PLTLSRHLKGQPVVP*SNPLGHSDPLASAS
Trigger: AGAGGCAGAAGCCAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR TCA 90 bp CAATGTGCATCAGGCCCACCCGAGACTGATCGGCCCGGGCATCGTTaGGGAAGAAGAGGATGGGGACAAGGATGTCTAGGACGTCGCTGC +
Preference number: 1 (lower is better)
Translates to: QCASGPPETDRPGHR*GRRGWGQGCLGRRC
Trigger: GCAGCGACGTCCTAGACATCCTTGTCCCCATCCTCTTCTTCCTCAACGATGCCCGGGCCGATCAGTCTCGGGTGGGCCTGATGCACATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR TCA 90 bp TGCAGATCTTCTCCACCTGCGGAACCAGCACCTGCAGCAGCCTCATaGTGGTCTGCAGCGGCAGCTTCGACTTCCAGGAGAGGACCCACT +
Preference number: 1 (lower is better)
Translates to: CRSSPPAEPAPAAAS*WSAAAASTSRRGPT
Trigger: AGTGGGTCCTCTCCTGGAAGTCGAAGCTGCCGCTGCAGACCATCATGAGGCTGCTGCAGGTGCTGGTTCCGCAGGTGGAGAAGATCTGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR GCA 90 bp ACCACGATGGTGAGCAGGCAGTCGAAGAGGGGCTGCAACCGCTGGTaGCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCAGGTCG +
Preference number: 1 (lower is better)
Translates to: TTMVSRQSKRGCNRW*PLVMILWNTTMSRS
Trigger: CGACCTGCTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTGCCTGCTCACCATCGTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 90 bp AGACCAGGTGGTGGTTCTGGGCGGCAGAGAAGAGGAACCAGGTGGTaGAGAAGGCCTCCAGCAGGTGCAGCAACTTGTTGGCAGTCACCA +
Preference number: 1 (lower is better)
Translates to: RPGGGSGRQRRGTRW*RRPPAGAATCWQSP
Trigger: TGGTGACTGCCAACAAGTTGCTGCACCTGCTGGAGGCCTTCTCCACCACCTGGTTCCTCTTCTCTGCCGCCCAGAACCACCACCTGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 90 bp TGGGGCTCAGGTTCCAGGGACCGCAAGGTGCCATCCTCTGACACCTaGGACTTCTCGGTCAGCTTGTCAATGCCTGGAGTAGCCACCAGA +
Preference number: 1 (lower is better)
Translates to: WGSGSRDRKVPSSDT*DFSVSLSMPGVATR
Trigger: TCTGGTGGCTACTCCAGGCATTGACAAGCTGACCGAGAAGTCCCAGGTGTCAGAGGATGGCACCTTGCGGTCCCTGGAACCTGAGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR TCA 90 bp TCTGAGCCAGTTCACATTGTCCTGGCCACAGGGGTCTCTAGGGCATaGCACTCAGGGCCACTCTGCCTGTTCCAGGCCCTGATCGTGGTA +
Preference number: 1 (lower is better)
Translates to: SEPVHIVLATGVSRA*HSGPLCLFQALIVV
Trigger: TACCACGATCAGGGCCTGGAACAGGCAGAGTGGCCCTGAGTGTCATGCCCTAGAGACCCCTGTGGCCAGGACAATGTGAACTGGCTCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR TCA 90 bp CCGTGGGCAGGTTGGCCAGCTGGTGGAAGATGCTGCGCTTGCGGATaGTGGCGTAGACCAGGTTGGAGTTGCCATCAAACTGGTACTGGA +
Preference number: 1 (lower is better)
Translates to: PWAGWPAGGRCCACG*WRRPGWSCHQTGTG
Trigger: TCCAGTACCAGTTTGATGGCAACTCCAACCTGGTCTACGCCATCATCCGCAAGCGCAGCATCTTCCACCAGCTGGCCAACCTGCCCACGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR GCA 90 bp AGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCACCTaGAGCAGCCTCATGATGGTCTGCAGCGGCAGCTTCGACTTCCAG +
Preference number: 1 (lower is better)
Translates to: RPLSMQIFSTCGTST*SSLMMVCSGSFDFQ
Trigger: CTGGAAGTCGAAGCTGCCGCTGCAGACCATCATGAGGCTGCTGCAGGTGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR GCA 90 bp TCAGACTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTaGGGAACCAGCACCTGCAGCAGCCTCATGATGGTCTGCAGCGGC +
Preference number: 1 (lower is better)
Translates to: SDSSVRPLSMQIFST*GTSTCSSLMMVCSG
Trigger: GCCGCTGCAGACCATCATGAGGCTGCTGCAGGTGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAGTCTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 90 bp GGGCATGTCTGTTCTCCGTGGAACAAAAGAACTGAACCCATGGGTTaGTGCTGCCACTTTCCGGAGCTGGGGGCAGGTACATGGCCTCGG +
Preference number: 1 (lower is better)
Translates to: GHVCSPWNKRTEPMG*CCHFPELGAGTWPR
Trigger: CCGAGGCCATGTACCTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTTTGTTCCACGGAGAACAGACATGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 90 bp GGGCAGGGCATGTCTGTTCTCCGTGGAACAAAAGAACTGAACCCATaGGTTGGTGCTGCCACTTTCCGGAGCTGGGGGCAGGTACATGGC +
Preference number: 1 (lower is better)
Translates to: GQGMSVLRGTKELNP*VGAATFRSWGQVHG
Trigger: GCCATGTACCTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTTTGTTCCACGGAGAACAGACATGCCCTGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 90 bp TTGACCACGATGGTGAGCAGGCAGTCGAAGAGGGGCTGCAACCGCTaGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCAGG +
Preference number: 1 (lower is better)
Translates to: LTTMVSRQSKRGCNR*CPLVMILWNTTMSR
Trigger: CCTGCTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTGCCTGCTCACCATCGTGGTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 90 bp AGAAGACCAGGTGGTGGTTCTGGGCGGCAGAGAAGAGGAACCAGGTaGTGGAGAAGGCCTCCAGCAGGTGCAGCAACTTGTTGGCAGTCA +
Preference number: 1 (lower is better)
Translates to: RRPGGGSGRQRRGTR*WRRPPAGAATCWQS
Trigger: TGACTGCCAACAAGTTGCTGCACCTGCTGGAGGCCTTCTCCACCACCTGGTTCCTCTTCTCTGCCGCCCAGAACCACCACCTGGTCTTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR GCA 90 bp GTCTGTTCTCCGTGGAACAAAAGAACTGAACCCATGGGTTGGTGCTaGCACTTTCCGGAGCTGGGGGCAGGTACATGGCCTCGGAGAAGC +
Preference number: 1 (lower is better)
Translates to: VCSPWNKRTEPMGWC*HFPELGAGTWPRRS
Trigger: GCTTCTCCGAGGCCATGTACCTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTTTGTTCCACGGAGAACAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 90 bp ATGTTGTTGAAGACCTCCAGGAGGAAGAAGACCAGGTGGTGGTTCTaGGCGGCAGAGAAGAGGAACCAGGTGGTGGAGAAGGCCTCCAGC +
Preference number: 1 (lower is better)
Translates to: MLLKTSRRKKTRWWF*AAEKRNQVVEKASS
Trigger: GCTGGAGGCCTTCTCCACCACCTGGTTCCTCTTCTCTGCCGCCCAGAACCACCACCTGGTCTTCTTCCTCCTGGAGGTCTTCAACAACAT
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR GCA 90 bp CATGTCTGTTCTCCGTGGAACAAAAGAACTGAACCCATGGGTTGGTaGTGCCACTTTCCGGAGCTGGGGGCAGGTACATGGCCTCGGAGA +
Preference number: 1 (lower is better)
Translates to: HVCSPWNKRTEPMGW*CHFPELGAGTWPRR
Trigger: TCTCCGAGGCCATGTACCTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTTTGTTCCACGGAGAACAGACATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 90 bp ACAAAAGAACTGAACCCATGGGTTGGTGCTGCCACTTTCCGGAGCTaGGGGCAGGTACATGGCCTCGGAGAAGCATGTCAGCAGCAGTTT +
Preference number: 1 (lower is better)
Translates to: TKELNPWVGAATFRS*GQVHGLGEACQQQF
Trigger: AAACTGCTGCTGACATGCTTCTCCGAGGCCATGTACCTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp CAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGGGTCCGTGGGATCGGCATCATCCATaGCGGTGCCAGTGGTGGTGC +
Preference number: 2 (lower is better)
Translates to: QVSAGAAAGPCEWWAGPWDRHHP*RCQWWC
Trigger: GCACCACCACTGGCACCGCCATGGATGATGCCGATC...CCACGGACCCGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp ACAAGGGCTCAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGTGGGGCTGGCACTGCTaGCACTGTCGTGGTCCAAAG +
Preference number: 2 (lower is better)
Translates to: TRAQVSAGAAAGPCEWWAWGWHC*HCRGPK
Trigger: CTTTGGACCACGACAGTGCCAGCAGTGCCAGCCCCA...CGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTGAGCCCTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp GCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGGGTCCGTGGGCAGGTTGGCCAGACCAGGTGGTGGTTCTaGGCGGCAGAGAAGAGGAAC +
Preference number: 2 (lower is better)
Translates to: APLQGLVNGGRVRGQVGQTRWWF*AAEKRN
Trigger: GTTCCTCTTCTCTGCCGCCCAGAACCACCACCTGGT...CTGGCCAACCTGCCCACGGACCCGCCCACCATTCACAAGGCCCTGCAGCGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR GCA 90 bp GCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGGGTCCGTGGGCAGGTTGGCCAGAAGGCCTCCAGCAGGTaGAGCAACTTGTTGGCAGTC +
Preference number: 2 (lower is better)
Translates to: APLQGLVNGGRVRGQVGQKASSR*SNLLAV
Trigger: GACTGCCAACAAGTTGCTGCACCTGCTGGAGGCCTT...CTGGCCAACCTGCCCACGGACCCGCCCACCATTCACAAGGCCCTGCAGCGGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGAGGGAGTCCGAGTGTTaGGGGCAGTGGTCTCTGGTG +
Preference number: 2 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRRESEC*GQWSLV
Trigger: CACCAGAGACCACTGCCCCCAACACTCGGACTCCCT...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR-3UTR TCA 90 bp AGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTGGGGTCTCTAGGGCATaGCACTCAGGGCCACTCTGC +
Preference number: 2 (lower is better)
Translates to: STPLPCPGTSRDSPWFPGGVSRA*HSGPLC
Trigger: GCAGAGTGGCCCTGAGTGTCATGCCCTAGAGACCCC...ACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR-3UTR GCA 90 bp CTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCACGAGGGTGCCTGGCTCTaGAGGGGCAGCGGGGCGGGA +
Preference number: 2 (lower is better)
Translates to: LIRQALVNADLLHLRNQHEGAWL*RGSGAG
Trigger: TCCCGCCCCGCTGCCCCTGCAGAGCCAGGCACCCTC...GTGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR TCA 90 bp AGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTTGCCTTCCCCTAGACTaGGCCCCTCGTCGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: STPLPCPGTSRDSPWFPGCLPLD*APRRLH
Trigger: ATGAAGCCGACGAGGGGCTCAGTCTAGGGGAAGGCA...ACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR-3UTR GCA 90 bp CAGCACCTGCAGCAGCCTCATGATGGTCTGCAGCGGCAGCTTCGACTTCCAGGACAGTCGAAGAGGGGCTaGAACCGCTGGTGCCCGCTG +
Preference number: 2 (lower is better)
Translates to: QHLQQPHDGLQRQLRLPGQSKRG*NRWCPL
Trigger: CAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTG...TCCTGGAAGTCGAAGCTGCCGCTGCAGACCATCATGAGGCTGCTGCAGGTGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGCAGTTCACATTGTCCTaGCCACAGGGGTCTCTAGGG +
Preference number: 2 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRQFTLS*PQGSLG
Trigger: CCCTAGAGACCCCTGTGGCCAGGACAATGTGAACTG...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR-3UTR CCA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGCACACCTTTTTCCCCTaGAGCCTGGAACAGCTGGCT +
Preference number: 2 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRHTFFP*SLEQLA
Trigger: AGCCAGCTGTTCCAGGCTCCAGGGGAAAAAGGTGTG...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR-3UTR CCA 90 bp CCATGCTGCAGGAACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGGGCGGGAGCCCTCCATaGAGGTGCCCTCCTGGGAGC +
Preference number: 2 (lower is better)
Translates to: PCCRNRRISDSSVRPLSMGGSPP*RCPPGS
Trigger: GCTCCCAGGAGGGCACCTCCATGGAGGGCTCCCGCC...CATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGTTCCTGCAGCATGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp AGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTGCTCAGAATGGTGGATaGGGGAAGCCTCAGGGACCA +
Preference number: 2 (lower is better)
Translates to: STPLPCPGTSRDSPWFPGAQNGG*GKPQGP
Trigger: TGGTCCCTGAGGCTTCCCCCATCCACCATTCTGAGC...ACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR-3UTR CCA 90 bp TTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGGCAGTGGTCTCTGGTaGGGGCATAGCCCCAGAGAT +
Preference number: 2 (lower is better)
Translates to: LGGWKHPLTLSRHLKGQPGSGLW*GHSPRD
Trigger: ATCTCTGGGGCTATGCCCCCACCAGAGACCACTGCC...GGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR-3UTR GCA 90 bp AGACTGGGATGTCCATGGGCACGCGGATTGAGTAGGGTTTGTTCAGCCGCACCCCCCATGGGTTGGTGCTaGCACTTTCCGGAGCTGGGG +
Preference number: 2 (lower is better)
Translates to: RLGCPWARGLSRVCSAAPPMGWC*HFPELG
Trigger: CCCCAGCTCCGGAAAGTGGCAGCACCAACCCATGGG...GGGTGCGGCTGAACAAACCCTACTCAATCCGCGTGCCCATGGACATCCCAGTCT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR GCA 90 bp AGACTGGGATGTCCATGGGCACGCGGATTGAGTAGGGTTTGTTCAGCCGCACCCCAGTGGGGCTGGCACTaGTGGCACTGTCGTGGTCCA +
Preference number: 2 (lower is better)
Translates to: RLGCPWARGLSRVCSAAPQWGWH*WHCRGP
Trigger: TGGACCACGACAGTGCCAGCAGTGCCAGCCCCACTG...GGGTGCGGCTGAACAAACCCTACTCAATCCGCGTGCCCATGGACATCCCAGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp GGGCTGCAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGGCCACTTTCCGGAGCTaGGGGCAGGTACATGGCCTC +
Preference number: 2 (lower is better)
Translates to: GLQPLVPAGDDLVEHHNEATFRS*GQVHGL
Trigger: GAGGCCATGTACCTGCCCCCAGCTCCGGAAAGTGGC...CTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR TCA 90 bp CCCTCGTCGGCTTCATCCTCACACCCGCTGTATCTCAAACAGCTTCACGTCGGTCGGCCCGGGCATCGTTaGGGAAGAAGAGGATGGGGA +
Preference number: 2 (lower is better)
Translates to: PSSASSSHPLYLKQLHVGRPGHR*GRRGWG
Trigger: TCCCCATCCTCTTCTTCCTCAACGATGCCCGGGCCG...ACCGACGTGAAGCTGTTTGAGATACAGCGGGTGTGAGGATGAAGCCGACGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR TCA 90 bp CCATGCTGCAGGAACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGCCACCAGACTGGTCTTaGGGGTGCCTGGCTCTGCAG +
Preference number: 2 (lower is better)
Translates to: PCCRNRRISDSSVRPLSMPPDWS*GCLALQ
Trigger: CTGCAGAGCCAGGCACCCTCAAGACCAGTCTGGTGG...CATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGTTCCTGCAGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR GCA 90 bp CTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCACGGCGTTGGGCTCCACTaGCCACTGGCTGATGAGGTG +
Preference number: 2 (lower is better)
Translates to: LIRQALVNADLLHLRNQHGVGLH*PLADEV
Trigger: CACCTCATCAGCCAGTGGGCAGTGGAGCCCAACGCC...GTGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR GCA 90 bp CCCTCGTCGGCTTCATCCTCACACCCGCTGTATCTCAAACAGCTTCACGTCGGTCCCACCAGGGTGCCATaGTGCAGGAACCGCAGGATC +
Preference number: 2 (lower is better)
Translates to: PSSASSSHPLYLKQLHVGPTRVP*CRNRRI
Trigger: GATCCTGCGGTTCCTGCAGCATGGCACCCTGGTGGG...ACCGACGTGAAGCTGTTTGAGATACAGCGGGTGTGAGGATGAAGCCGACGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGTTCTGCCTCTGGGGCTaGGTAGCACAGGAGTGGGTG +
Preference number: 2 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLFCLWG*VAQEWV
Trigger: CACCCACTCCTGTGCTACCCAGCCCCAGAGGCAGAA...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR-3UTR CCA 90 bp AACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCAGGCACAGTGACCCATTaGCTTCTGCCTCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: NSWLWVRRLEAPPYPVQAGTVTH*LLPLGL
Trigger: CAGCCCCAGAGGCAGAAGCCAATGGGTCACTGTGCC...TGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR-3UTR CCA 90 bp CCATGCTGCAGGAACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGCGTCCACAGTGGGGCTaGCACTGCTGGCACTGTCGT +
Preference number: 2 (lower is better)
Translates to: PCCRNRRISDSSVRPLSMRPQWG*HCWHCR
Trigger: ACGACAGTGCCAGCAGTGCCAGCCCCACTGTGGACG...CATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGTTCCTGCAGCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp GGCTGCAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCGGTCCCTGTGAAGACTaGGATGTCCATGGGCACGCG +
Preference number: 2 (lower is better)
Translates to: GCNRWCPLVMILWNTTMSGPCED*DVHGHA
Trigger: CGCGTGCCCATGGACATCCCAGTCTTCACAGGGACC...GCTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp CCCTCGTCGGCTTCATCCTCACACCCGCTGTATCTCAAACAGCTTCACGTCGGTGGCTCCACTGCCCACTaGCTGATGAGGTGGACGGTC +
Preference number: 2 (lower is better)
Translates to: PSSASSSHPLYLKQLHVGGSTAH*LMRWTV
Trigger: GACCGTCCACCTCATCAGCCAGTGGGCAGTGGAGCC...ACCGACGTGAAGCTGTTTGAGATACAGCGGGTGTGAGGATGAAGCCGACGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR TCA 90 bp AACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCAGGTCGTGCCTTCCCCTAGACTaGGCCCCTCGTCGGCTTCAT +
Preference number: 2 (lower is better)
Translates to: NRWCPLVMILWNTTMSRSCLPLD*APRRLH
Trigger: ATGAAGCCGACGAGGGGCTCAGTCTAGGGGAAGGCA...CGACCTGCTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR TCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACGGGTTGAGGGGGATCTaGGCCAGTTCACATTGTCCT +
Preference number: 2 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYGLRGI*ASSHCP
Trigger: AGGACAATGTGAACTGGCTCAGATCCCCCTCAACCC...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR-3UTR TCA 90 bp CCATGCTGCAGGAACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGTGTGGAACACCACAATaGGCAGGTCGGCGTGGGTCC +
Preference number: 2 (lower is better)
Translates to: PCCRNRRISDSSVRPLSMCGTPQ*AGRRGS
Trigger: GGACCCACGCCGACCTGCTCATTGTGGTGTTCCACA...CATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGTTCCTGCAGCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR GCA 90 bp CCATGCTGCAGGAACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGCATCATCCATGGCGGTaGCAGTGGTGGTGCCGTCCA +
Preference number: 2 (lower is better)
Translates to: PCCRNRRISDSSVRPLSMHHPWR*QWWCRP
Trigger: TGGACGGCACCACCACTGGCACCGCCATGGATGATG...CATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGTTCCTGCAGCATGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR GCA 90 bp CCATGCTGCAGGAACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGCCATCCTCCAAGCTCTaGTGGGGCTCAGGTTCCAGG +
Preference number: 2 (lower is better)
Translates to: PCCRNRRISDSSVRPLSMPSSKL*WGSGSR
Trigger: CCTGGAACCTGAGCCCCAGCAGAGCTTGGAGGATGG...CATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGTTCCTGCAGCATGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp AACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCAATTGGCTTCTGCCTCTaGGGCTGGGTAGCACAGGAG +
Preference number: 2 (lower is better)
Translates to: NSWLWVRRLEAPPYPVQAIGFCL*GWVAQE
Trigger: CTCCTGTGCTACCCAGCCCCAGAGGCAGAAGCCAAT...TGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR-3UTR CCA 90 bp GGGCTGCAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCTGGGGGCAGGTACATaGCCTCGGAGAAGCATGTCA +
Preference number: 2 (lower is better)
Translates to: GLQPLVPAGDDLVEHHNELGAGT*PRRSMS
Trigger: TGACATGCTTCTCCGAGGCCATGTACCTGCCCCCAG...CTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp CCATGCTGCAGGAACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGTCTGGAGCAGGGGGTTaGACAGCAGCCGGGCTATAC +
Preference number: 2 (lower is better)
Translates to: PCCRNRRISDSSVRPLSMSGAGG*TAAGLY
Trigger: GTATAGCCCGGCTGCTGTCCAACCCCCTGCTCCAGA...CATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGTTCCTGCAGCATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp CAGCACCTGCAGCAGCCTCATGATGGTCTGCAGCGGCAGCTTCGACTTCCAGGAGGTGCAGCAACTTGTTaGCAGTCACCATGGACAGGC +
Preference number: 2 (lower is better)
Translates to: QHLQQPHDGLQRQLRLPGGAATC*QSPWTG
Trigger: GCCTGTCCATGGTGACTGCCAACAAGTTGCTGCACC...TCCTGGAAGTCGAAGCTGCCGCTGCAGACCATCATGAGGCTGCTGCAGGTGCTG
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp CTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCACAGGTTGGCCAGCTGGTaGAAGATGCTGCGCTTGCGG +
Preference number: 2 (lower is better)
Translates to: LIRQALVNADLLHLRNQHRLASW*KMLRLR
Trigger: CCGCAAGCGCAGCATCTTCCACCAGCTGGCCAACCT...GTGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR GCA 90 bp CCCTCGTCGGCTTCATCCTCACACCCGCTGTATCTCAAACAGCTTCACGTCGGTACCAGGGTGCCATGCTaGAGGAACCGCAGGATCTCA +
Preference number: 2 (lower is better)
Translates to: PSSASSSHPLYLKQLHVGTRVPC*RNRRIS
Trigger: TGAGATCCTGCGGTTCCTGCAGCATGGCACCCTGGT...ACCGACGTGAAGCTGTTTGAGATACAGCGGGTGTGAGGATGAAGCCGACGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp CAGCACCTGCAGCAGCCTCATGATGGTCTGCAGCGGCAGCTTCGACTTCCAGGACCCTTGAGGATGAACTaGAAGTCCTCCTCACGATGG +
Preference number: 2 (lower is better)
Translates to: QHLQQPHDGLQRQLRLPGPLRMN*KSSSRW
Trigger: CCATCGTGAGGAGGACTTCCAGTTCATCCTCAAGGG...TCCTGGAAGTCGAAGCTGCCGCTGCAGACCATCATGAGGCTGCTGCAGGTGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp AGCAGCCGGGCTATACCCTTGAGGATGAACTGGAAGTCCTCCTCACGATGGATGGCTCAGAATGGTGGATaGGGGAAGCCTCAGGGACCA +
Preference number: 2 (lower is better)
Translates to: SSRAIPLRMNWKSSSRWMAQNGG*GKPQGP
Trigger: TGGTCCCTGAGGCTTCCCCCATCCACCATTCTGAGC...CATCCATCGTGAGGAGGACTTCCAGTTCATCCTCAAGGGTATAGCCCGGCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp AGACTGGGATGTCCATGGGCACGCGGATTGAGTAGGGTTTGTTCAGCCGCACCCCTGCTGGCACTGTCGTaGTCCAAAGTGACAATGAGC +
Preference number: 2 (lower is better)
Translates to: RLGCPWARGLSRVCSAAPLLALS*SKVTMS
Trigger: GCTCATTGTCACTTTGGACCACGACAGTGCCAGCAG...GGGTGCGGCTGAACAAACCCTACTCAATCCGCGTGCCCATGGACATCCCAGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp CTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCACCAGGTTCTCAGGGCCTaGAGGATCGGCATCATCCAT +
Preference number: 2 (lower is better)
Translates to: LIRQALVNADLLHLRNQHQVLRA*RIGIIH
Trigger: ATGGATGATGCCGATCCTCCAGGCCCTGAGAACCTG...GTGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp CTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCACAGACTGGGATGTCCATaGGCACGCGGATTGAGTAGG +
Preference number: 2 (lower is better)
Translates to: LIRQALVNADLLHLRNQHRLGCP*ARGLSR
Trigger: CCTACTCAATCCGCGTGCCCATGGACATCCCAGTCT...GTGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp CCATGCTGCAGGAACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGAGAAGAGGAACCAGGTaGTGGAGAAGGCCTCCAGCA +
Preference number: 2 (lower is better)
Translates to: PCCRNRRISDSSVRPLSMRRGTR*WRRPPA
Trigger: TGCTGGAGGCCTTCTCCACCACCTGGTTCCTCTTCT...CATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGTTCCTGCAGCATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR GCA 90 bp CTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCACCCTCCTCACGATGGATaGGGGACAGGTAGTTCACAA +
Preference number: 2 (lower is better)
Translates to: LIRQALVNADLLHLRNQHPPHDG*GTGSSQ
Trigger: TTGTGAACTACCTGTCCCGCATCCATCGTGAGGAGG...GTGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR GCA 90 bp CTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCACATGAAGACACCAATGTaGATCAGGCCCACCCGAGAC +
Preference number: 2 (lower is better)
Translates to: LIRQALVNADLLHLRNQHMKTPM*IRPTRD
Trigger: GTCTCGGGTGGGCCTGATGCACATTGGTGTCTTCAT...GTGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR GCA 90 bp ACTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCAAGCCTCATGATGGTCTaGAGCGGCAGCTTCGACTTC +
Preference number: 2 (lower is better)
Translates to: THPSGPCQCRSSPPAEPASLMMV*SGSFDF
Trigger: GAAGTCGAAGCTGCCGCTGCAGACCATCATGAGGCT...TGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp GGCTGCAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCACTAGCAGCTCCTGGTaGAACTGGATCTTCTTGGTG +
Preference number: 2 (lower is better)
Translates to: GCNRWCPLVMILWNTTMSTSSSW*NWIFLV
Trigger: CACCAAGAAGATCCAGTTCCACCAGGAGCTGCTAGT...GCTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR GCA 90 bp CAGAAGAGAACTAGCAGCTCCTGGTGGAACTGGATCTTCTTGGTGGAGTTAGGCGAACCCATGGGTTGGTaGTGCCACTTTCCGGAGCTG +
Preference number: 2 (lower is better)
Translates to: QKRTSSSWWNWIFLVELGEPMGW*CHFPEL
Trigger: CAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTC...GCCTAACTCCACCAAGAAGATCCAGTTCCACCAGGAGCTGCTAGTTCTCTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR GCA 90 bp CTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCACTGTCTAGGACGTCGCTaGTCTTCAGCACGAAGAAGA +
Preference number: 2 (lower is better)
Translates to: LIRQALVNADLLHLRNQHCLGRR*SSARRR
Trigger: TCTTCTTCGTGCTGAAGAGCAGCGACGTCCTAGACA...GTGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp GGCTGCAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCAGCTCCTGGTGGAACTaGATCTTCTTGGTGGAGTTA +
Preference number: 2 (lower is better)
Translates to: GCNRWCPLVMILWNTTMSSSWWN*IFLVEL
Trigger: TAACTCCACCAAGAAGATCCAGTTCCACCAGGAGCT...GCTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp GGCTGCAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCAGAACTAGCAGCTCCTaGTGGAACTGGATCTTCTTG +
Preference number: 2 (lower is better)
Translates to: GCNRWCPLVMILWNTTMSRTSSS*WNWIFL
Trigger: CAAGAAGATCCAGTTCCACCAGGAGCTGCTAGTTCT...GCTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp CCCTCGTCGGCTTCATCCTCACACCCGCTGTATCTCAAACAGCTTCACGTCGGTTGGCGTAGACCAGGTTaGAGTTGCCATCAAACTGGT +
Preference number: 2 (lower is better)
Translates to: PSSASSSHPLYLKQLHVGWRRPG*SCHQTG
Trigger: ACCAGTTTGATGGCAACTCCAACCTGGTCTACGCCA...ACCGACGTGAAGCTGTTTGAGATACAGCGGGTGTGAGGATGAAGCCGACGAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp AGCACGAAGAAGAGGAATTTCTTGTTGAAGTCGCAGAGCTTCCAGAAGAGAACTTGGTGCCGTCCACAGTaGGGCTGGCACTGCTGGCAC +
Preference number: 2 (lower is better)
Translates to: STKKRNFLLKSQSFQKRTWCRPQ*GWHCWH
Trigger: GTGCCAGCAGTGCCAGCCCCACTGTGGACGGCACCA...AGTTCTCTTCTGGAAGCTCTGCGACTTCAACAAGAAATTCCTCTTCTTCGTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR GCA 90 bp ACTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCAAGACCAGGTTGGAGTTaGCATCAAACTGGTACTGGA +
Preference number: 2 (lower is better)
Translates to: THPSGPCQCRSSPPAEPARPGWS*HQTGTG
Trigger: TCCAGTACCAGTTTGATGGCAACTCCAACCTGGTCT...TGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp ACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACTGGTGATGATCTTGTaGAACACCACAATGAGCAGG +
Preference number: 2 (lower is better)
Translates to: TAGSQTHPSGPCQCRSSPLVMIL*NTTMSR
Trigger: CCTGCTCATTGTGGTGTTCCACAAGATCATCACCAG...TGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CCA 90 bp CAGAAGAGAACTAGCAGCTCCTGGTGGAACTGGATCTTCTTGGTGGAGTTAGGCAAAGAACTGAACCCATaGGTTGGTGCTGCCACTTTC +
Preference number: 2 (lower is better)
Translates to: QKRTSSSWWNWIFLVELGKELNP*VGAATF
Trigger: GAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTT...GCCTAACTCCACCAAGAAGATCCAGTTCCACCAGGAGCTGCTAGTTCTCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR GCA 72 bp CTGCAGGGGCAGCGGGGCGGGAGCCCTCCATGGAGGTaGCCTCCTGGGAGCCGGTGCGAGACAAGGGCTCAG +
Preference number: 3 (lower is better)
Translates to: LQGQRGGSPPWR*PPGSRCETRAQ
Trigger: CTGAGCCCTTGTCTCGCACCGGCTCCCAGGAGGGCACCTCCATGGAGGGCTCCCGCCCCGCTGCCCCTGCAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 72 bp GTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTaGGCGGGTCCGTGGGCAGGTTGGCCAGCTGGTGGA +
Preference number: 3 (lower is better)
Translates to: VSAGAAAGPCEW*AGPWAGWPAGG
Trigger: TCCACCAGCTGGCCAACCTGCCCACGGACCCGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACAC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 72 bp CAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATaGTGGGCGGGTCCGTGGGCAGGTTGGCCAGCTGGT +
Preference number: 3 (lower is better)
Translates to: QVSAGAAAGPCE*WAGPWAGWPAG
Trigger: ACCAGCTGGCCAACCTGCCCACGGACCCGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR GCA 72 bp CACTGCCCACTGGCTGATGAGGTGGACGGTCGCCGCTaGTCCCTCCATGCCTGGCTGGGCTCCCCCTTAGCC +
Preference number: 3 (lower is better)
Translates to: HCPLADEVDGRR*SLHAWLGSPLA
Trigger: GGCTAAGGGGGAGCCCAGCCAGGCATGGAGGGAGCAGCGGCGACCGTCCACCTCATCAGCCAGTGGGCAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 72 bp GGCCTGGAGGATCGGCATCATCCATGGCGGTGCCAGTaGTGGTGCCGTCCACAGTGGGGCTGGCACTGCTGG +
Preference number: 3 (lower is better)
Translates to: GLEDRHHPWRCQ*WCRPQWGWHCW
Trigger: CCAGCAGTGCCAGCCCCACTGTGGACGGCACCACCACTGGCACCGCCATGGATGATGCCGATCCTCCAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 72 bp GCCGCTGCAGGGCCTTGTGAATGGTGGGCGGGTCCGTaGGCAGGTTGGCCAGCTGGTGGAAGATGCTGCGCT +
Preference number: 3 (lower is better)
Translates to: AAAGPCEWWAGP*AGWPAGGRCCA
Trigger: AGCGCAGCATCTTCCACCAGCTGGCCAACCTGCCCACGGACCCGCCCACCATTCACAAGGCCCTGCAGCGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 72 bp AGAGGACCCACTCTGGCGTTGGGCTCCACTGCCCACTaGCTGATGAGGTGGACGGTCGCCGCTGCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: RGPTLALGSTAH*LMRWTVAAAPS
Trigger: GGAGGGAGCAGCGGCGACCGTCCACCTCATCAGCCAGTGGGCAGTGGAGCCCAACGCCAGAGTGGGTCCTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR GCA 72 bp TTCCAGGAGAGGACCCACTCTGGCGTTGGGCTCCACTaGCCACTGGCTGATGAGGTGGACGGTCGCCGCTGC +
Preference number: 3 (lower is better)
Translates to: FQERTHSGVGLH*PLADEVDGRRC
Trigger: GCAGCGGCGACCGTCCACCTCATCAGCCAGTGGGCAGTGGAGCCCAACGCCAGAGTGGGTCCTCTCCTGGAA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 72 bp CAGTCGGCCAGCTCCCAGCCTCCTCGAGGAGCAGCCTaGCCACACCTTTTTCCCCTGGAGCCTGGAACAGCT +
Preference number: 3 (lower is better)
Translates to: QSASSQPPRGAA*PHLFPLEPGTA
Trigger: AGCTGTTCCAGGCTCCAGGGGAAAAAGGTGTGGCCAGGCTGCTCCTCGAGGAGGCTGGGAGCTGGCCGACTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR CCA 72 bp CATCCATGGCGGTGCCAGTGGTGGTGCCGTCCACAGTaGGGCTGGCACTGCTGGCACTGTCGTGGTCCAAAG +
Preference number: 3 (lower is better)
Translates to: HPWRCQWWCRPQ*GWHCWHCRGPK
Trigger: CTTTGGACCACGACAGTGCCAGCAGTGCCAGCCCCACTGTGGACGGCACCACCACTGGCACCGCCATGGATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 72 bp ACAGGTTCTCAGGGCCTGGAGGATCGGCATCATCCATaGCGGTGCCAGTGGTGGTGCCGTCCACAGTGGGGC +
Preference number: 3 (lower is better)
Translates to: TGSQGLEDRHHP*RCQWWCRPQWG
Trigger: GCCCCACTGTGGACGGCACCACCACTGGCACCGCCATGGATGATGCCGATCCTCCAGGCCCTGAGAACCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 72 bp CCGTCCACAGTGGGGCTGGCACTGCTGGCACTGTCGTaGTCCAAAGTGACAATGAGCACCTGGGCAGCCTCC +
Preference number: 3 (lower is better)
Translates to: PSTVGLALLALS*SKVTMSTWAAS
Trigger: GGAGGCTGCCCAGGTGCTCATTGTCACTTTGGACCACGACAGTGCCAGCAGTGCCAGCCCCACTGTGGACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CAA 90 bp GGTTCCAGGGACCGCAAGGTGCCATCCTCTGACACCTGGGACTTCTCGGTCAGCTCGGCCCGGGCATCGTaGAGGAAGAAGAGGATGGGG +
Preference number: 3 (lower is better)
Translates to: GSRDRKVPSSDTWDFSVSSARAS*RKKRMG
Trigger: CCCCATCCTCTTCTTCCTCAACGATGCCCGGGCCGA...GCTGACCGAGAAGTCCCAGGTGTCAGAGGATGGCACCTTGCGGTCCCTGGAACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CAA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGAGGGAGTCCGAGTGTaGGGGGCAGTGGTCTCTGGT +
Preference number: 3 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTEGVRV*GAVVSG
Trigger: ACCAGAGACCACTGCCCCCAACACTCGGACTCCCTC...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR-3UTR CAA 90 bp ACCACGATGGTGAGCAGGCAGTCGAAGAGGGGCTGCAACCGCTGGTGCCCGCTGAGCCGGGCTATACCCTaGAGGATGAACTGGAAGTCC +
Preference number: 3 (lower is better)
Translates to: TTMVSRQSKRGCNRWCPLSRAIP*RMNWKS
Trigger: GGACTTCCAGTTCATCCTCAAGGGTATAGCCCGGCT...CAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTGCCTGCTCACCATCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR TCA 72 bp GTTCACATTGTCCTGGCCACAGGGGTCTCTAGGGCATaGCACTCAGGGCCACTCTGCCTGTTCCAGGCCCTG +
Preference number: 3 (lower is better)
Translates to: VHIVLATGVSRA*HSGPLCLFQAL
Trigger: CAGGGCCTGGAACAGGCAGAGTGGCCCTGAGTGTCATGCCCTAGAGACCCCTGTGGCCAGGACAATGTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR TCA 72 bp GGGCTCAGGTTCCAGGGACCGCAAGGTGCCATCCTCTaGCACCTGGGACTTCTCGGTCAGCTTGTCAATGCC +
Preference number: 3 (lower is better)
Translates to: GLRFQGPQGAIL*HLGLLGQLVNA
Trigger: GGCATTGACAAGCTGACCGAGAAGTCCCAGGTGTCAGAGGATGGCACCTTGCGGTCCCTGGAACCTGAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR TCA 72 bp TCTCCACCTGCGGAACCAGCACCTGCAGCAGCCTCATaGTGGTCTGCAGCGGCAGCTTCGACTTCCAGGAGA +
Preference number: 3 (lower is better)
Translates to: SPPAEPAPAAAS*WSAAAASTSRR
Trigger: TCTCCTGGAAGTCGAAGCTGCCGCTGCAGACCATCATGAGGCTGCTGCAGGTGCTGGTTCCGCAGGTGGAGA
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR GCA 72 bp TTGACCACGATGGTGAGCAGGCAGTCGAAGAGGGGCTaGAACCGCTGGTGCCCGCTGGTGATGATCTTGTGG +
Preference number: 3 (lower is better)
Translates to: LTTMVSRQSKRG*NRWCPLVMILW
Trigger: CCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTGCCTGCTCACCATCGTGGTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 72 bp CTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTaGTCAAACCCCTTAGGGCACAGTGACCCATTGGCT +
Preference number: 3 (lower is better)
Translates to: LSRHLKGQPVVP*SNPLGHSDPLA
Trigger: AGCCAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR CCA 72 bp CTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTaGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAG +
Preference number: 3 (lower is better)
Translates to: LEPGTAGFGLGG*KHPLTLSRHLK
Trigger: CTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR CCA 72 bp CTGAACCCATGGGTTGGTGCTGCCACTTTCCGGAGCTaGGGGCAGGTACATGGCCTCGGAGAAGCATGTCAG +
Preference number: 3 (lower is better)
Translates to: LNPWVGAATFRS*GQVHGLGEACQ
Trigger: CTGACATGCTTCTCCGAGGCCATGTACCTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 72 bp GGTGGTTCTGGGCGGCAGAGAAGAGGAACCAGGTGGTaGAGAAGGCCTCCAGCAGGTGCAGCAACTTGTTGG +
Preference number: 3 (lower is better)
Translates to: GGSGRQRRGTRW*RRPPAGAATCW
Trigger: CCAACAAGTTGCTGCACCTGCTGGAGGCCTTCTCCACCACCTGGTTCCTCTTCTCTGCCGCCCAGAACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 72 bp GGTGGTGGTTCTGGGCGGCAGAGAAGAGGAACCAGGTaGTGGAGAAGGCCTCCAGCAGGTGCAGCAACTTGT +
Preference number: 3 (lower is better)
Translates to: GGGSGRQRRGTR*WRRPPAGAATC
Trigger: ACAAGTTGCTGCACCTGCTGGAGGCCTTCTCCACCACCTGGTTCCTCTTCTCTGCCGCCCAGAACCACCACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR TCA 72 bp CCCCGAAGTTCCGCTCCCCGCTCAGAAGCAGCAAGATaGAGACACCAATGTGCATCAGGCCCACCCGAGACT +
Preference number: 3 (lower is better)
Translates to: PRSSAPRSEAAR*RHQCASGPPET
Trigger: AGTCTCGGGTGGGCCTGATGCACATTGGTGTCTTCATCTTGCTGCTTCTGAGCGGGGAGCGGAACTTCGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR TCA 72 bp CCCTGTGAAGACTGGGATGTCCATGGGCACGCGGATTaGGTAGGGTTTGTTCAGCCGCACCCCGAAGTTCCG +
Preference number: 3 (lower is better)
Translates to: PCEDWDVHGHAD*VGFVQPHPEVP
Trigger: CGGAACTTCGGGGTGCGGCTGAACAAACCCTACTCAATCCGCGTGCCCATGGACATCCCAGTCTTCACAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR GCA 72 bp GTGAGCAGGCAGTCGAAGAGGGGCTGCAACCGCTGGTaGCCGCTGGTGATGATCTTGTGGAACACCACAATG +
Preference number: 3 (lower is better)
Translates to: VSRQSKRGCNRW*PLVMILWNTTM
Trigger: CATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTGCCTGCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 72 bp AGGAGCAGCCTGGCCACACCTTTTTCCCCTGGAGCCTaGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCA +
Preference number: 3 (lower is better)
Translates to: RSSLATPFSPGA*NSWLWVRRLEA
Trigger: TGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGGGGAAAAAGGTGTGGCCAGGCTGCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR CCA 72 bp ATGGTGAGCAGGCAGTCGAAGAGGGGCTGCAACCGCTaGTGCCCGCTGGTGATGATCTTGTGGAACACCACA +
Preference number: 3 (lower is better)
Translates to: MVSRQSKRGCNR*CPLVMILWNTT
Trigger: TGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTGCCTGCTCACCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CAA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGCTGAGCCAGTTCACATaGTCCTGGCCACAGGGGTCT +
Preference number: 3 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLLSQFT*SWPQGS
Trigger: AGACCCCTGTGGCCAGGACAATGTGAACTGGCTCAG...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR-3UTR CAA 90 bp ACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCAGGGTCCGTGGGCAGGTaGGCCAGCTGGTGGAAGATG +
Preference number: 3 (lower is better)
Translates to: TAGSQTHPSGPCQCRSSPGSVGR*ASWWKM
Trigger: CATCTTCCACCAGCTGGCCAACCTGCCCACGGACCC...TGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR-3UTR CAA 90 bp AACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCAGGTCGCCATGGGCACGCGGATaGAGTAGGGTTTGTTCAGCC +
Preference number: 3 (lower is better)
Translates to: NRWCPLVMILWNTTMSRSPWARG*SRVCSA
Trigger: GGCTGAACAAACCCTACTCAATCCGCGTGCCCATGG...CGACCTGCTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR GCA 72 bp CCGTGGAACAAAAGAACTGAACCCATGGGTTGGTGCTaGCACTTTCCGGAGCTGGGGGCAGGTACATGGCCT +
Preference number: 3 (lower is better)
Translates to: PWNKRTEPMGWC*HFPELGAGTWP
Trigger: AGGCCATGTACCTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTTTGTTCCACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR GCA 72 bp TCAATGCAGATCTTCTCCACCTGCGGAACCAGCACCTaGAGCAGCCTCATGATGGTCTGCAGCGGCAGCTTC +
Preference number: 3 (lower is better)
Translates to: SMQIFSTCGTST*SSLMMVCSGSF
Trigger: GAAGCTGCCGCTGCAGACCATCATGAGGCTGCTGCAGGTGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 72 bp GGTTCCAGGGACCGCAAGGTGCCATCCTCTGACACCTaGGACTTCTCGGTCAGCTTGTCAATGCCTGGAGTA +
Preference number: 3 (lower is better)
Translates to: GSRDRKVPSSDT*DFSVSLSMPGV
Trigger: TACTCCAGGCATTGACAAGCTGACCGAGAAGTCCCAGGTGTCAGAGGATGGCACCTTGCGGTCCCTGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR GCA 72 bp TCTCCGTGGAACAAAAGAACTGAACCCATGGGTTGGTaGTGCCACTTTCCGGAGCTGGGGGCAGGTACATGG +
Preference number: 3 (lower is better)
Translates to: SPWNKRTEPMGW*CHFPELGAGTW
Trigger: CCATGTACCTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTTTGTTCCACGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 72 bp ATGATCTTGTGGAACACCACAATGAGCAGGTCGGCGTaGGTCCCTGTGAAGACTGGGATGTCCATGGGCACG +
Preference number: 3 (lower is better)
Translates to: MILWNTTMSRSA*VPVKTGMSMGT
Trigger: CGTGCCCATGGACATCCCAGTCTTCACAGGGACCCACGCCGACCTGCTCATTGTGGTGTTCCACAAGATCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR TCA 72 bp GGCAGGGCATGTCTGTTCTCCGTGGAACAAAAGAACTaGACCCATGGGTTGGTGCTGCCACTTTCCGGAGCT +
Preference number: 3 (lower is better)
Translates to: GRACLFSVEQKN*THGLVLPLSGA
Trigger: AGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTTTGTTCCACGGAGAACAGACATGCCCTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 72 bp TGTTCTCCGTGGAACAAAAGAACTGAACCCATGGGTTaGTGCTGCCACTTTCCGGAGCTGGGGGCAGGTACA +
Preference number: 3 (lower is better)
Translates to: CSPWNKRTEPMG*CCHFPELGAGT
Trigger: TGTACCTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTTTGTTCCACGGAGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 72 bp ATGTCTGTTCTCCGTGGAACAAAAGAACTGAACCCATaGGTTGGTGCTGCCACTTTCCGGAGCTGGGGGCAG +
Preference number: 3 (lower is better)
Translates to: MSVLRGTKELNP*VGAATFRSWGQ
Trigger: CTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTTTGTTCCACGGAGAACAGACAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534480.5
3UTR CCA 72 bp AAGTCGCAGAGCTTCCAGAAGAGAACTAGCAGCTCCTaGTGGAACTGGATCTTCTTGGTGGAGTTAGGCAGG +
Preference number: 3 (lower is better)
Translates to: KSQSFQKRTSSS*WNWIFLVELGR
Trigger: CCTGCCTAACTCCACCAAGAAGATCCAGTTCCACCAGGAGCTGCTAGTTCTCTTCTGGAAGCTCTGCGACTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGGGTCCGTGGTCGACCCCATGTCTCTaGAGCCCGCTCCGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: QVSAGAAAGPCEWWAGPWSTPCL*SPLRPG
Trigger: GCCGGGCCGGAGCGGGCTCCAGAGACATGGGGTCGA...CCACGGACCCGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp GCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGGGTCCGTGGGCAGGTTGGCCAGTGGTGGGCGGGTCCGTaGGCAGGTTGGCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: APLQGLVNGGRVRGQVGQWWAGP*AGWPAG
Trigger: ACCAGCTGGCCAACCTGCCCACGGACCCGCCCACCA...CTGGCCAACCTGCCCACGGACCCGCCCACCATTCACAAGGCCCTGCAGCGGCGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGGGTCCGTGGGACCCACTCTGGCGTTaGGCTCCACTGCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: QVSAGAAAGPCEWWAGPWDPLWR*APLPTG
Trigger: GCCAGTGGGCAGTGGAGCCCAACGCCAGAGTGGGTC...CCACGGACCCGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGGGTCCGTGGGGTCCGTGGGCAGGTTaGCCAGCTGGTGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: QVSAGAAAGPCEWWAGPWGPWAG*PAGGRC
Trigger: GCATCTTCCACCAGCTGGCCAACCTGCCCACGGACC...CCACGGACCCGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR TCA 90 bp GCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGAGCAGCCGGCCAAGTTGGAGGGTaGCTCTTCCCGCACGGCCCG +
Preference number: 4 (lower is better)
Translates to: APVWLLQSASSQPPRGAAGQVGG*LFPHGP
Trigger: CGGGCCGTGCGGGAAGAGTCACCCTCCAACTTGGCC...GGCTGCTCCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGCGCTGCAGGGCCTTGTaGATGGTGGGCGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRRCRAL*MVGGSV
Trigger: CACGGACCCGCCCACCATTCACAAGGCCCTGCAGCG...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp GGGTTGGTGCTGCCACTTTCCGGAGCTGGGGGCAGGTACATGGCCTCGGAGAAGGAGGGTGCCTGGCTCTaGAGGGGCAGCGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: GLVLPLSGAGGRYMASEKEGAWL*RGSGAG
Trigger: TCCCGCCCCGCTGCCCCTGCAGAGCCAGGCACCCTC...CTTCTCCGAGGCCATGTACCTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGGTGGACGGTCGCCGCTaGTCCCTCCATGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRVDGRR*SLHAWL
Trigger: CAGCCAGGCATGGAGGGAGCAGCGGCGACCGTCCAC...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp CAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGGGTCCGTGGGGTCCCTGTGAAGACTaGGATGTCCATGGGCACGCG +
Preference number: 4 (lower is better)
Translates to: QVSAGAAAGPCEWWAGPWGPCED*DVHGHA
Trigger: CGCGTGCCCATGGACATCCCAGTCTTCACAGGGACC...CCACGGACCCGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGGGTCCGTGGAGGTTGGCCAGCTGGTaGAAGATGCTGCGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: QVSAGAAAGPCEWWAGPWRLASW*KMLRLR
Trigger: CCGCAAGCGCAGCATCTTCCACCAGCTGGCCAACCT...CCACGGACCCGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR TCA 90 bp ACCACGATGGTGAGCAGGCAGTCGAAGAGGGGCTGCAACCGCTGGTGCCCGCTGAGGGCAGCACGCGGGTaGGCAGCCGGCTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: TTMVSRQSKRGCNRWCPLRAARG*AAGCSS
Trigger: TGAACTGCAGCCGGCTGCTCACCCGCGTGCTGCCCT...CAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTGCCTGCTCACCATCGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR TCA 90 bp GCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGAGCAGCCCTCCTCCGGTGGCTCTaGACCGTGAAGTCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: APVWLLQSASSQPPRGAALLRWL*TVKSGQ
Trigger: CTGCCCGGACTTCACGGTTCAGAGCCACCGGAGGAG...GGCTGCTCCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp ACAAGGGCTCAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGCAGTGGGGCTGGCACTaGTGGCACTGTCGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: TRAQVSAGAAAGPCEWWAQWGWH*WHCRGP
Trigger: TGGACCACGACAGTGCCAGCAGTGCCAGCCCCACTG...CGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTGAGCCCTTGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGGGGCCTTGTGAATGGTaGGCGGGTCCGTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRGPCEW*AGPWAG
Trigger: ACCTGCCCACGGACCCGCCCACCATTCACAAGGCCC...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp GCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGAGCAGCCGCAGGGCCTTGTGAATaGTGGGCGGGTCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: APVWLLQSASSQPPRGAAAGPCE*WAGPWA
Trigger: TGCCCACGGACCCGCCCACCATTCACAAGGCCCTGC...GGCTGCTCCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGCGGCCCGGGCATCGTTaGGGAAGAAGAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRRPGHR*GRRGWG
Trigger: TCCCCATCCTCTTCTTCCTCAACGATGCCCGGGCCG...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp GGGTTGGTGCTGCCACTTTCCGGAGCTGGGGGCAGGTACATGGCCTCGGAGAAGCGCTGCAGGGCCTTGTaGATGGTGGGCGGGTCCGTG +
Preference number: 4 (lower is better)
Translates to: GLVLPLSGAGGRYMASEKRCRAL*MVGGSV
Trigger: CACGGACCCGCCCACCATTCACAAGGCCCTGCAGCG...CTTCTCCGAGGCCATGTACCTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp GGGTTGGTGCTGCCACTTTCCGGAGCTGGGGGCAGGTACATGGCCTCGGAGAAGCGGTGCCAGTGGTGGTaGCGTCCACAGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: GLVLPLSGAGGRYMASEKRCQWW*RPQWGW
Trigger: CCAGCCCCACTGTGGACGGCACCACCACTGGCACCG...CTTCTCCGAGGCCATGTACCTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp GCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGGGTCCGTGGGCAGGTTGGCCAGTGCTGCCGGCACCAGTaGAAACACATCCTGCACCGA +
Preference number: 4 (lower is better)
Translates to: APLQGLVNGGRVRGQVGQCCRHQ*KHILHR
Trigger: TCGGTGCAGGATGTGTTTGCACTGGTGCCGGCAGCA...CTGGCCAACCTGCCCACGGACCCGCCCACCATTCACAAGGCCCTGCAGCGGCGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp GCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGAGCAGCCGGCCCGGATCTCTGCTaGCGGCACCAGTGCAAACAC +
Preference number: 4 (lower is better)
Translates to: APVWLLQSASSQPPRGAAGPDLC*RHQCKH
Trigger: GTGTTTGCACTGGTGCCGGCAGCAGAGATCCGGGCC...GGCTGCTCCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp GCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGAGCAGCCCCCATGGGTTGGTGCTaGCACTTTCCGGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: APVWLLQSASSQPPRGAAPMGWC*HFPELG
Trigger: CCCCAGCTCCGGAAAGTGGCAGCACCAACCCATGGG...GGCTGCTCCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACGAGGGTGCCTGGCTCTaGAGGGGCAGCGGGGCGGGA +
Preference number: 4 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYEGAWL*RGSGAG
Trigger: TCCCGCCCCGCTGCCCCTGCAGAGCCAGGCACCCTC...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp ACAAGGGCTCAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGCCATCCTCCAAGCTCTaGTGGGGCTCAGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: TRAQVSAGAAAGPCEWWAPSSKL*WGSGSR
Trigger: CCTGGAACCTGAGCCCCAGCAGAGCTTGGAGGATGG...CGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTGAGCCCTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp AGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTTGGCGGTGCCAGTGGTaGTGCCGTCCACAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: STPLPCPGTSRDSPWFPGWRCQW*CRPQWG
Trigger: GCCCCACTGTGGACGGCACCACCACTGGCACCGCCA...ACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp ACAAGGGCTCAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGATGAGCAGGTCGGCGTaGGTCCCTGTGAAGACTGGG +
Preference number: 4 (lower is better)
Translates to: TRAQVSAGAAAGPCEWWAMSRSA*VPVKTG
Trigger: CCCAGTCTTCACAGGGACCCACGCCGACCTGCTCAT...CGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTGAGCCCTTGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCAAACCTCGACCCCATGTCTCTaGAGCCCGCTCCGGCCCGGC +
Preference number: 4 (lower is better)
Translates to: PLPCPGTSRDSPWFPGQTSTPCL*SPLRPG
Trigger: GCCGGGCCGGAGCGGGCTCCAGAGACATGGGGTCGA...GGTTTGACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp CAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGGGTCCGTGGACTGAACCCATGGGTTaGTGCTGCCACTTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: QVSAGAAAGPCEWWAGPWTEPMG*CCHFPE
Trigger: CTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGT...CCACGGACCCGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp GCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGAGCAGCCGGTCCGTGGGCAGGTTaGCCAGCTGGTGGAAGATGC +
Preference number: 4 (lower is better)
Translates to: APVWLLQSASSQPPRGAAGPWAG*PAGGRC
Trigger: GCATCTTCCACCAGCTGGCCAACCTGCCCACGGACC...GGCTGCTCCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp GCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGAGCAGCCGGCTCCACTGCCCACTaGCTGATGAGGTGGACGGTC +
Preference number: 4 (lower is better)
Translates to: APVWLLQSASSQPPRGAAGSTAH*LMRWTV
Trigger: GACCGTCCACCTCATCAGCCAGTGGGCAGTGGAGCC...GGCTGCTCCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp GCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGAGCAGCCGGTGGCTCTGAACCGTaGAGTCCGGGCAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: APVWLLQSASSQPPRGAAGGSEP*SPGRRA
Trigger: TGCTCTTCTGCCCGGACTTCACGGTTCAGAGCCACC...GGCTGCTCCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp ACCACGATGGTGAGCAGGCAGTCGAAGAGGGGCTGCAACCGCTGGTGCCCGCTGCCTGCAGCAGCCTCATaGTGGTCTGCAGCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: TTMVSRQSKRGCNRWCPLPAAAS*WSAAAA
Trigger: AGCTGCCGCTGCAGACCATCATGAGGCTGCTGCAGG...CAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTGCCTGCTCACCATCGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR TCA 90 bp AGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCCTGGTACTTGCGGATaGGGATGGGGTGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: STPLPCPGTSRDSPWFPGPGTCG*GWGGAR
Trigger: CCGTGCCCCACCCCATCCTCATCCGCAAGTACCAGG...ACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGGGCTGCAACCGCTGGTaGCCGCTGGTGATGATCTTG +
Preference number: 4 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRGCNRW*PLVMIL
Trigger: CAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCC...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp CCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCAAACCAGCCCTCCATGGAGGTaGCCTCCTGGGAGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: PLPCPGTSRDSPWFPGQTSPPWR*PPGSRC
Trigger: GCACCGGCTCCCAGGAGGGCACCTCCATGGAGGGCT...GGTTTGACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGCGCCCCACATGTAGGTaGGGAACCACATGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRRPTCR*GTTWQC
Trigger: GCACTGCCATGTGGTTCCGCACCTACATGTGGGGCG...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGTCTGGAGCAGGGGGTTaGACAGCAGCCGGGCTATAC +
Preference number: 4 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRSGAGG*TAAGLY
Trigger: GTATAGCCCGGCTGCTGTCCAACCCCCTGCTCCAGA...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp CAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGGGTCCGTGGGTGTCTGCCCAGAACTaGTCCCAAAAGGCATCATCG +
Preference number: 4 (lower is better)
Translates to: QVSAGAAAGPCEWWAGPWVSAQN*SQKASS
Trigger: CGATGATGCCTTTTGGGACCAGTTCTGGGCAGACAC...CCACGGACCCGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp AGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTGACCCACTCTGGCGTTaGGCTCCACTGCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: STPLPCPGTSRDSPWFPGDPLWR*APLPTG
Trigger: GCCAGTGGGCAGTGGAGCCCAACGCCAGAGTGGGTC...ACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp ACAAGGGCTCAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGGCTCAGAATGGTGGATaGGGGAAGCCTCAGGGACCA +
Preference number: 4 (lower is better)
Translates to: TRAQVSAGAAAGPCEWWAAQNGG*GKPQGP
Trigger: TGGTCCCTGAGGCTTCCCCCATCCACCATTCTGAGC...CGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTGAGCCCTTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR TCA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGCAAGGTGCCATCCTCTaGCACCTGGGACTTCTCGGT +
Preference number: 4 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRQGAIL*HLGLLG
Trigger: ACCGAGAAGTCCCAGGTGTCAGAGGATGGCACCTTG...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp AGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCACGGCCCGGATCTCTaGTGCCGGCACCAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: STPLPCPGTSRDSPWFPGHGPDL*CRHQCK
Trigger: TTTGCACTGGTGCCGGCAGCAGAGATCCGGGCCGTG...ACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp AGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTGGCGTTGGGCTCCACTaGCCACTGGCTGATGAGGTG +
Preference number: 4 (lower is better)
Translates to: STPLPCPGTSRDSPWFPGGVGLH*PLADEV
Trigger: CACCTCATCAGCCAGTGGGCAGTGGAGCCCAACGCC...ACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp ACCACGATGGTGAGCAGGCAGTCGAAGAGGGGCTGCAACCGCTGGTGCCCGCTGCGCCCCACATGTAGGTaGGGAACCACATGGCAGTGC +
Preference number: 4 (lower is better)
Translates to: TTMVSRQSKRGCNRWCPLRPTCR*GTTWQC
Trigger: GCACTGCCATGTGGTTCCGCACCTACATGTGGGGCG...CAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTGCCTGCTCACCATCGTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGGGAGGACTAAACGGCTaGCTCCCAGTTCCCTTCCCT +
Preference number: 4 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRGGLNG*LPVPFP
Trigger: AGGGAAGGGAACTGGGAGGCAGCCGTTTAGTCCTCC...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp GCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGAGCAGCCCATCCTGCACCGAGGTaGCTGTGTCTGCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: APVWLLQSASSQPPRGAAHPAPR*LCLPRT
Trigger: AGTTCTGGGCAGACACAGCCACCTCGGTGCAGGATG...GGCTGCTCCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp GCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGAGCAGCCACAGGGTGGCCAAGTTaGAGGGTGACTCTTCCCGCA +
Preference number: 4 (lower is better)
Translates to: APVWLLQSASSQPPRGAATGWPS*RVTLPA
Trigger: TGCGGGAAGAGTCACCCTCCAACTTGGCCACCCTGT...GGCTGCTCCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp CCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCAAACCCTGCCCCGGGCACTGTaGACCAGAAGAAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PLPCPGTSRDSPWFPGQTLPRAL*TRRSPS
Trigger: GGAGGGGCTTCTTCTGGTCCACAGTGCCCGGGGCAG...GGTTTGACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACTGGTGGGCGGGTCCGTaGGCAGGTTGGCCAGCTGGT +
Preference number: 4 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYWWAGP*AGWPAG
Trigger: ACCAGCTGGCCAACCTGCCCACGGACCCGCCCACCA...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AGACTGGGATGTCCATGGGCACGCGGATTGAGTAGGGTTTGTTCAGCCGCACCCGGCGGGAGCCCTCCATaGAGGTGCCCTCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: RLGCPWARGLSRVCSAAPGGSPP*RCPPGS
Trigger: GCTCCCAGGAGGGCACCTCCATGGAGGGCTCCCGCC...GGGTGCGGCTGAACAAACCCTACTCAATCCGCGTGCCCATGGACATCCCAGTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCAAACCTGCTCCCTCCATGCCTaGCTGGGCTCCCCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: PLPCPGTSRDSPWFPGQTCSLHA*LGSPLA
Trigger: GGCTAAGGGGGAGCCCAGCCAGGCATGGAGGGAGCA...GGTTTGACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACGGATGAGGATGGGGTaGGGCACGGGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: NSWLWVRRLEAPPYPVQARMRMG*GTGSSP
Trigger: GGGGCTGCTGCCCGTGCCCCACCCCATCCTCATCCG...TGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGTCAAGGGACAGCCCGTaGTTCCCTGGTCAAACCCCT +
Preference number: 4 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRSRDSP*FPGQTP
Trigger: AGGGGTTTGACCAGGGAACCACGGGCTGTCCCTTGA...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp GCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGAGCAGCCGGAGCCTGGAACAGCTaGCTTTGGGTTAGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: APVWLLQSASSQPPRGAAGAWNS*LWVRRL
Trigger: CAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCC...GGCTGCTCCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp AGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTTGTGGAACACCACAATaGGCAGGTCGGCGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: STPLPCPGTSRDSPWFPGCGTPQ*AGRRGS
Trigger: GGACCCACGCCGACCTGCTCATTGTGGTGTTCCACA...ACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp GGGCTGCAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGGGCCAAGTTGGAGGGTaGCTCTTCCCGCACGGCCCG +
Preference number: 4 (lower is better)
Translates to: GLQPLVPAGDDLVEHHNEGQVGG*LFPHGP
Trigger: CGGGCCGTGCGGGAAGAGTCACCCTCCAACTTGGCC...CTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR TCA 90 bp CCACACCTTTTTCCCCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAGGGCAGCACGCGGGTaGGCAGCCGGCTGCAGTTCA +
Preference number: 4 (lower is better)
Translates to: PHLFPLEPGTAGFGLGGWRAARG*AAGCSS
Trigger: TGAACTGCAGCCGGCTGCTCACCCGCGTGCTGCCCT...CCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGGGGAAAAAGGTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp CCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCACCAGACTGGTCTTaGGGGTGCCTGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: PLPCPGTSRDSPWFPGQTPPDWS*GCLALQ
Trigger: CTGCAGAGCCAGGCACCCTCAAGACCAGTCTGGTGG...GGTTTGACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp CCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTGCAGCAGCCTCATaGTGGTCTGCAGCGGCAGCT +
Preference number: 4 (lower is better)
Translates to: PLPCPGTSRDSPWFPGQTPAAAS*WSAAAA
Trigger: AGCTGCCGCTGCAGACCATCATGAGGCTGCTGCAGG...GGTTTGACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp CCACACCTTTTTCCCCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGCGGTGCCAGTGGTGGTaGCGTCCACAGTGGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PHLFPLEPGTAGFGLGGWRCQWW*RPQWGW
Trigger: CCAGCCCCACTGTGGACGGCACCACCACTGGCACCG...CCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGGGGAAAAAGGTGTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp GGTTCCAGGGACCGCAAGGTGCCATCCTCTGACACCTGGGACTTCTCGGTCAGCGTGGCTTCCACGGGCTaGGTCTTGGTGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSRDRKVPSSDTWDFSVSVASTG*VLVVSW
Trigger: CCAGCTCACCACCAAGACGCAGCCCGTGGAAGCCAC...GCTGACCGAGAAGTCCCAGGTGTCAGAGGATGGCACCTTGCGGTCCCTGGAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGCGAGGTGGCTGTGTCTaGCCAGAACTGGTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRRGGCV*PELVPK
Trigger: TTTTGGGACCAGTTCTGGGCAGACACAGCCACCTCG...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp ACCACGATGGTGAGCAGGCAGTCGAAGAGGGGCTGCAACCGCTGGTGCCCGCTGGAACCCATGGGTTGGTaGTGCCACTTTCCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TTMVSRQSKRGCNRWCPLEPMGW*CHFPEL
Trigger: CAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTC...CAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTGCCTGCTCACCATCGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCCATGGCGGTGCCAGTaGTGGTGCCGTCCACAGTGG +
Preference number: 4 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYPWRCQ*WCRPQW
Trigger: CCACTGTGGACGGCACCACCACTGGCACCGCCATGG...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp GCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGAGCAGCCAGACTGGGATGTCCATaGGCACGCGGATTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: APVWLLQSASSQPPRGAARLGCP*ARGLSR
Trigger: CCTACTCAATCCGCGTGCCCATGGACATCCCAGTCT...GGCTGCTCCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGTCCGGAAGTTCAGCTTaGAGTCGGTCGACCCCATGT +
Preference number: 4 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRSGSSA*SRSTPC
Trigger: ACATGGGGTCGACCGACTCCAAGCTGAACTTCCGGA...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp ACCACGATGGTGAGCAGGCAGTCGAAGAGGGGCTGCAACCGCTGGTGCCCGCTGACAGGGTGGCCAAGTTaGAGGGTGACTCTTCCCGCA +
Preference number: 4 (lower is better)
Translates to: TTMVSRQSKRGCNRWCPLTGWPS*RVTLPA
Trigger: TGCGGGAAGAGTCACCCTCCAACTTGGCCACCCTGT...CAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTGCCTGCTCACCATCGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCAAACCCGTCCACAGTGGGGCTaGCACTGCTGGCACTGTCGT +
Preference number: 4 (lower is better)
Translates to: PLPCPGTSRDSPWFPGQTRPQWG*HCWHCR
Trigger: ACGACAGTGCCAGCAGTGCCAGCCCCACTGTGGACG...GGTTTGACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp ACCACGATGGTGAGCAGGCAGTCGAAGAGGGGCTGCAACCGCTGGTGCCCGCTGACCAGGTGGTGGTTCTaGGCGGCAGAGAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: TTMVSRQSKRGCNRWCPLTRWWF*AAEKRN
Trigger: GTTCCTCTTCTCTGCCGCCCAGAACCACCACCTGGT...CAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTGCCTGCTCACCATCGTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCAAACCATGGAGGTGCCCTCCTaGGAGCCGGTGCGAGACAAG +
Preference number: 4 (lower is better)
Translates to: PLPCPGTSRDSPWFPGQTMEVPS*EPVRDK
Trigger: CTTGTCTCGCACCGGCTCCCAGGAGGGCACCTCCAT...GGTTTGACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp CTGGCACTGCTGGCACTGTCGTGGTCCAAAGTGACAATGAGCACCTGGGCAGCCTGCTCCCTCCATGCCTaGCTGGGCTCCCCCTTAGCC +
Preference number: 4 (lower is better)
Translates to: LALLALSWSKVTMSTWAACSLHA*LGSPLA
Trigger: GGCTAAGGGGGAGCCCAGCCAGGCATGGAGGGAGCA...GGCTGCCCAGGTGCTCATTGTCACTTTGGACCACGACAGTGCCAGCAGTGCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACGGAGAGGACCCACTCTaGCGTTGGGCTCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYGEDPL*RWAPLP
Trigger: GGGCAGTGGAGCCCAACGCCAGAGTGGGTCCTCTCC...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp TTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCCCCAGAGGCCAGAGCTaGGTGAAGGATGAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LGGWKHPLTLSRHLKGQPPRGQS*VKDEGW
Trigger: CCACCCCTCATCCTTCACCCAGCTCTGGCCTCTGGG...GGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCGGCGTGGGTCCCTGTaGAGACTGGGATGTCCATGG +
Preference number: 4 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYRRGSL*RLGCPW
Trigger: CCATGGACATCCCAGTCTTCACAGGGACCCACGCCG...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp GGAGCTGGGGGCAGGTACATGGCCTCGGAGAAGCATGTCAGCAGCAGTTTCAGCCGGCGTGGGTCCCTGTaGAGACTGGGATGTCCATGG +
Preference number: 4 (lower is better)
Translates to: GAGGRYMASEKHVSSSFSRRGSL*RLGCPW
Trigger: CCATGGACATCCCAGTCTTCACAGGGACCCACGCCG...GCTGAAACTGCTGCTGACATGCTTCTCCGAGGCCATGTACCTGCCCCCAGCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR TCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACGCTGCGTCTTGGTGGTaGGCTGGATCACCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYAASWW*AGSPPS
Trigger: GGAAGGCGGTGATCCAGCTCACCACCAAGACGCAGC...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp CAGCACCTGCAGCAGCCTCATGATGGTCTGCAGCGGCAGCTTCGACTTCCAGGACCACCAGACTGGTCTTaGGGGTGCCTGGCTCTGCAG +
Preference number: 4 (lower is better)
Translates to: QHLQQPHDGLQRQLRLPGPPDWS*GCLALQ
Trigger: CTGCAGAGCCAGGCACCCTCAAGACCAGTCTGGTGG...TCCTGGAAGTCGAAGCTGCCGCTGCAGACCATCATGAGGCTGCTGCAGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR TCA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGGGGTCTCTAGGGCATaGCACTCAGGGCCACTCTGC +
Preference number: 4 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTGVSRA*HSGPLC
Trigger: GCAGAGTGGCCCTGAGTGTCATGCCCTAGAGACCCC...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACGAGCTGGGTGAAGGATaGGGGGTGGCATCGCCCCAT +
Preference number: 4 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYELGEG*GVASPH
Trigger: ATGGGGCGATGCCACCCCTCATCCTTCACCCAGCTC...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGCAGTCGAAGAGGGGCTaGAACCGCTGGTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLQSKRG*NRWCPL
Trigger: CAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTG...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp ACCACGATGGTGAGCAGGCAGTCGAAGAGGGGCTGCAACCGCTGGTGCCCGCTGAAGGCCTCCAGCAGGTaGAGCAACTTGTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: TTMVSRQSKRGCNRWCPLKASSR*SNLLAV
Trigger: GACTGCCAACAAGTTGCTGCACCTGCTGGAGGCCTT...CAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTGCCTGCTCACCATCGTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp GTGGAAGATGCTGCGCTTGCGGATGATGGCGTAGACCAGGTTGGAGTTGCCATCGTGGACGGTCGCCGCTaGTCCCTCCATGCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: VEDAALADDGVDQVGVAIVDGRR*SLHAWL
Trigger: CAGCCAGGCATGGAGGGAGCAGCGGCGACCGTCCAC...GATGGCAACTCCAACCTGGTCTACGCCATCATCCGCAAGCGCAGCATCTTCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp CAGCACCTGCAGCAGCCTCATGATGGTCTGCAGCGGCAGCTTCGACTTCCAGGACCCACCAGGGTGCCATaGTGCAGGAACCGCAGGATC +
Preference number: 4 (lower is better)
Translates to: QHLQQPHDGLQRQLRLPGPTRVP*CRNRRI
Trigger: GATCCTGCGGTTCCTGCAGCATGGCACCCTGGTGGG...TCCTGGAAGTCGAAGCTGCCGCTGCAGACCATCATGAGGCTGCTGCAGGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp AACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCATGGTGCCGTCCACAGTaGGGCTGGCACTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: NSWLWVRRLEAPPYPVQAWCRPQ*GWHCWH
Trigger: GTGCCAGCAGTGCCAGCCCCACTGTGGACGGCACCA...TGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAAGGGGCTGCAACCGCTaGTGCCCGCTGGTGATGATC +
Preference number: 4 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTRGCNR*CPLVMI
Trigger: GATCATCACCAGCGGGCACCAGCGGTTGCAGCCCCT...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACACAGCTGTCCAGGGAGTaGACGTCCTCTGCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTQLSRE*TSSAES
Trigger: GGACTCGGCAGAGGACGTCCACTCCCTGGACAGCTG...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp CAGCACCTGCAGCAGCCTCATGATGGTCTGCAGCGGCAGCTTCGACTTCCAGGACAGCTGTCCAGGGAGTaGACGTCCTCTGCCGAGTCC +
Preference number: 4 (lower is better)
Translates to: QHLQQPHDGLQRQLRLPGQLSRE*TSSAES
Trigger: GGACTCGGCAGAGGACGTCCACTCCCTGGACAGCTG...TCCTGGAAGTCGAAGCTGCCGCTGCAGACCATCATGAGGCTGCTGCAGGTGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACGCCACTTTCCGGAGCTaGGGGCAGGTACATGGCCTC +
Preference number: 4 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYATFRS*GQVHGL
Trigger: GAGGCCATGTACCTGCCCCCAGCTCCGGAAAGTGGC...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp ACAAGGGCTCAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGTGGCGTAGACCAGGTTaGAGTTGCCATCAAACTGGT +
Preference number: 4 (lower is better)
Translates to: TRAQVSAGAAAGPCEWWAWRRPG*SCHQTG
Trigger: ACCAGTTTGATGGCAACTCCAACCTGGTCTACGCCA...CGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTGAGCCCTTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp TTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGGCAGGTTGGCCAGCTaGTGGAAGATGCTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: LGGWKHPLTLSRHLKGQPGRLAS*WKMLRL
Trigger: CAAGCGCAGCATCTTCCACCAGCTGGCCAACCTGCC...GGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp CTGGCACTGCTGGCACTGTCGTGGTCCAAAGTGACAATGAGCACCTGGGCAGCCATGGAGGTGCCCTCCTaGGAGCCGGTGCGAGACAAG +
Preference number: 4 (lower is better)
Translates to: LALLALSWSKVTMSTWAAMEVPS*EPVRDK
Trigger: CTTGTCTCGCACCGGCTCCCAGGAGGGCACCTCCAT...GGCTGCCCAGGTGCTCATTGTCACTTTGGACCACGACAGTGCCAGCAGTGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp TCCCTTCCCTGCCCCTCATTACTGGGTAAGAGGGAGCCAGGCTATTTCCATGGAGGCGGGAGCCCTCCATaGAGGTGCCCTCCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: SLPCPSLLGKREPGYFHGGGSPP*RCPPGS
Trigger: GCTCCCAGGAGGGCACCTCCATGGAGGGCTCCCGCC...TCCATGGAAATAGCCTGGCTCCCTCTTACCCAGTAATGAGGGGCAGGGAAGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp GGGCTGCAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGGGAGAGGACCCACTCTaGCGTTGGGCTCCACTGCCC +
Preference number: 4 (lower is better)
Translates to: GLQPLVPAGDDLVEHHNEGEDPL*RWAPLP
Trigger: GGGCAGTGGAGCCCAACGCCAGAGTGGGTCCTCTCC...CTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp ACTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCACGGATGAGGATGGGGTaGGGCACGGGCAGCAGCCCC +
Preference number: 4 (lower is better)
Translates to: THPSGPCQCRSSPPAEPARMRMG*GTGSSP
Trigger: GGGGCTGCTGCCCGTGCCCCACCCCATCCTCATCCG...TGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCAAACCAGGGAGTCCGAGTGTTaGGGGCAGTGGTCTCTGGTG +
Preference number: 4 (lower is better)
Translates to: PLPCPGTSRDSPWFPGQTRESEC*GQWSLV
Trigger: CACCAGAGACCACTGCCCCCAACACTCGGACTCCCT...GGTTTGACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp TTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCCAGCCCGTGGTTCCCTaGTCAAACCCCTTAGGGCAC +
Preference number: 4 (lower is better)
Translates to: LGGWKHPLTLSRHLKGQPQPVVP*SNPLGH
Trigger: GTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTG...GGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp CCCTCGTCGGCTTCATCCTCACACCCGCTGTATCTCAAACAGCTTCACGTCGGTCTCCTCCGGTGGCTCTaGACCGTGAAGTCCGGGCAG +
Preference number: 4 (lower is better)
Translates to: PSSASSSHPLYLKQLHVGLLRWL*TVKSGQ
Trigger: CTGCCCGGACTTCACGGTTCAGAGCCACCGGAGGAG...ACCGACGTGAAGCTGTTTGAGATACAGCGGGTGTGAGGATGAAGCCGACGAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR TCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACTGCCTTCCCCTAGACTaGGCCCCTCGTCGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYCLPLD*APRRLH
Trigger: ATGAAGCCGACGAGGGGCTCAGTCTAGGGGAAGGCA...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGTGTCTAGGACGTCGCTaGTCTTCAGCACGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRCLGRR*SSARRR
Trigger: TCTTCTTCGTGCTGAAGAGCAGCGACGTCCTAGACA...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGGTGGCTTCCACGGGCTaGGTCTTGGTGGTGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLVASTG*VLVVSW
Trigger: CCAGCTCACCACCAAGACGCAGCCCGTGGAAGCCAC...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp CTGGCACTGCTGGCACTGTCGTGGTCCAAAGTGACAATGAGCACCTGGGCAGCCGGAGTGGACGTCCTCTaGCGAGTCCACAGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LALLALSWSKVTMSTWAAGVDVL*RVHSAP
Trigger: AGGAGCACTGTGGACTCGGCAGAGGACGTCCACTCC...GGCTGCCCAGGTGCTCATTGTCACTTTGGACCACGACAGTGCCAGCAGTGCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp ACTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCAAGCCCTCCATGGAGGTaGCCTCCTGGGAGCCGGTGC +
Preference number: 4 (lower is better)
Translates to: THPSGPCQCRSSPPAEPASPPWR*PPGSRC
Trigger: GCACCGGCTCCCAGGAGGGCACCTCCATGGAGGGCT...TGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp CCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCAAACCACCAGGGTGCCATGCTaGAGGAACCGCAGGATCTCA +
Preference number: 4 (lower is better)
Translates to: PLPCPGTSRDSPWFPGQTTRVPC*RNRRIS
Trigger: TGAGATCCTGCGGTTCCTGCAGCATGGCACCCTGGT...GGTTTGACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGCCCACCAGGGTGCCATaGTGCAGGAACCGCAGGATC +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLPTRVP*CRNRRI
Trigger: GATCCTGCGGTTCCTGCAGCATGGCACCCTGGTGGG...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp CCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCAAACCGGAACCACATGGCAGTaGCCGAGTTGGCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: PLPCPGTSRDSPWFPGQTGTTWQ*PSWPGT
Trigger: AGTACCAGGCCAACTCGGGCACTGCCATGTGGTTCC...GGTTTGACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp GGTTCCAGGGACCGCAAGGTGCCATCCTCTGACACCTGGGACTTCTCGGTCAGCGGAACCACATGGCAGTaGCCGAGTTGGCCTGGTACT +
Preference number: 4 (lower is better)
Translates to: GSRDRKVPSSDTWDFSVSGTTWQ*PSWPGT
Trigger: AGTACCAGGCCAACTCGGGCACTGCCATGTGGTTCC...GCTGACCGAGAAGTCCCAGGTGTCAGAGGATGGCACCTTGCGGTCCCTGGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACACACCACCCCACACCATaGCCCAAGGATACGGGAGGT +
Preference number: 4 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTHHPTP*PKDTGG
Trigger: ACCTCCCGTATCCTTGGGGCATGGTGTGGGGTGGTG...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp CTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCACTGGTGCCGTCCACAGTaGGGCTGGCACTGCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LIRQALVNADLLHLRNQHWCRPQ*GWHCWH
Trigger: GTGCCAGCAGTGCCAGCCCCACTGTGGACGGCACCA...GTGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGATCGGCATCATCCATaGCGGTGCCAGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTDRHHP*RCQWWC
Trigger: GCACCACCACTGGCACCGCCATGGATGATGCCGATC...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp GGGTTGGTGCTGCCACTTTCCGGAGCTGGGGGCAGGTACATGGCCTCGGAGAAGAGACTGGGATGTCCATaGGCACGCGGATTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: GLVLPLSGAGGRYMASEKRLGCP*ARGLSR
Trigger: CCTACTCAATCCGCGTGCCCATGGACATCCCAGTCT...CTTCTCCGAGGCCATGTACCTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp GGTTCCAGGGACCGCAAGGTGCCATCCTCTGACACCTGGGACTTCTCGGTCAGCCATCCTGCACCGAGGTaGCTGTGTCTGCCCAGAACT +
Preference number: 4 (lower is better)
Translates to: GSRDRKVPSSDTWDFSVSHPAPR*LCLPRT
Trigger: AGTTCTGGGCAGACACAGCCACCTCGGTGCAGGATG...GCTGACCGAGAAGTCCCAGGTGTCAGAGGATGGCACCTTGCGGTCCCTGGAACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACATGGGGCTGGCACTGCTaGCACTGTCGTGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTWGWHC*HCRGPK
Trigger: CTTTGGACCACGACAGTGCCAGCAGTGCCAGCCCCA...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp TTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCAGAGGAACCAGGTGGTaGAGAAGGCCTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: LGGWKHPLTLSRHLKGQPRGTRW*RRPPAG
Trigger: ACCTGCTGGAGGCCTTCTCCACCACCTGGTTCCTCT...GGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp GGAGCTGGGGGCAGGTACATGGCCTCGGAGAAGCATGTCAGCAGCAGTTTCAGCGGCAGGTTGGCCAGCTaGTGGAAGATGCTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: GAGGRYMASEKHVSSSFSGRLAS*WKMLRL
Trigger: CAAGCGCAGCATCTTCCACCAGCTGGCCAACCTGCC...GCTGAAACTGCTGCTGACATGCTTCTCCGAGGCCATGTACCTGCCCCCAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCATGCTGCAGGAACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGGCAGGGCCTTGTGAATaGTGGGCGGGTCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: PCCRNRRISDSSVRPLSMAGPCE*WAGPWA
Trigger: TGCCCACGGACCCGCCCACCATTCACAAGGCCCTGC...CATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGTTCCTGCAGCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAAGGTGCGGAACCACATaGCAGTGCCCGAGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTRCGTT*QCPSWP
Trigger: AGGCCAACTCGGGCACTGCCATGTGGTTCCGCACCT...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp CCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCAAACCATTGGCTTCTGCCTCTaGGGCTGGGTAGCACAGGAG +
Preference number: 4 (lower is better)
Translates to: PLPCPGTSRDSPWFPGQTIGFCL*GWVAQE
Trigger: CTCCTGTGCTACCCAGCCCCAGAGGCAGAAGCCAAT...GGTTTGACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACACCTCGAGGAGCAGCCTaGCCACACCTTTTTCCCCTG +
Preference number: 4 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTPRGAA*PHLFPL
Trigger: CAGGGGAAAAAGGTGTGGCCAGGCTGCTCCTCGAGG...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGGGAGGTGCCCCAGTCTaGCTTTTGCAGTCGGCCAGC +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLGGAPV*LLQSAS
Trigger: GCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCC...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGTGCTGCGCTTGCGGATaGTGGCGTAGACCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLCCACG*WRRPGW
Trigger: CCAACCTGGTCTACGCCATCATCCGCAAGCGCAGCA...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp GCATCGTTGAGGAAGAAGAGGATGGGGACAAGGATGTCTAGGACGTCGCTGCTCCCTGGTACTTGCGGATaGGGATGGGGTGGGGCACGG +
Preference number: 4 (lower is better)
Translates to: ASLRKKRMGTRMSRTSLLPGTCG*GWGGAR
Trigger: CCGTGCCCCACCCCATCCTCATCCGCAAGTACCAGG...GAGCAGCGACGTCCTAGACATCCTTGTCCCCATCCTCTTCTTCCTCAACGATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR TCA 90 bp AGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCATTCCTCAGATAGATaGCGCCCCACATGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: STPLPCPGTSRDSPWFPGHSSDR*RPTCRC
Trigger: GCACCTACATGTGGGGCGTCATCTATCTGAGGAATG...ACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp GGGCTGCAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGTGCCTTCCCCTAGACTaGGCCCCTCGTCGGCTTCAT +
Preference number: 4 (lower is better)
Translates to: GLQPLVPAGDDLVEHHNECLPLD*APRRLH
Trigger: ATGAAGCCGACGAGGGGCTCAGTCTAGGGGAAGGCA...CTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGCATCATCCATGGCGGTaGCAGTGGTGGTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLHHPWR*QWWCRP
Trigger: TGGACGGCACCACCACTGGCACCGCCATGGATGATG...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp CCATGCTGCAGGAACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGGGCCCGGATCTCTGCTaGCGGCACCAGTGCAAACAC +
Preference number: 4 (lower is better)
Translates to: PCCRNRRISDSSVRPLSMGPDLC*RHQCKH
Trigger: GTGTTTGCACTGGTGCCGGCAGCAGAGATCCGGGCC...CATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGTTCCTGCAGCATGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp CCCTCGTCGGCTTCATCCTCACACCCGCTGTATCTCAAACAGCTTCACGTCGGTCACGGCCCGGATCTCTaGTGCCGGCACCAGTGCAAA +
Preference number: 4 (lower is better)
Translates to: PSSASSSHPLYLKQLHVGHGPDL*CRHQCK
Trigger: TTTGCACTGGTGCCGGCAGCAGAGATCCGGGCCGTG...ACCGACGTGAAGCTGTTTGAGATACAGCGGGTGTGAGGATGAAGCCGACGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGCTGCCGAGTCCACAGTaGTCCTCCGGTGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLLPSPQ*SSGGSE
Trigger: TTCAGAGCCACCGGAGGAGCACTGTGGACTCGGCAG...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp AACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCAGGAGTGGACGTCCTCTaGCGAGTCCACAGTGCTCCT +
Preference number: 4 (lower is better)
Translates to: NSWLWVRRLEAPPYPVQAGVDVL*RVHSAP
Trigger: AGGAGCACTGTGGACTCGGCAGAGGACGTCCACTCC...TGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACGAACCCATGGGTTGGTaGTGCCACTTTCCGGAGCTG +
Preference number: 4 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYEPMGW*CHFPEL
Trigger: CAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTC...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGCCATCCTCCAAGCTCTaGTGGGGCTCAGGTTCCAGG +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLPSSKL*WGSGSR
Trigger: CCTGGAACCTGAGCCCCAGCAGAGCTTGGAGGATGG...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp AGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTTCAGGCCCTTGTCAATaGAGATCTTCTCCACCTGCG +
Preference number: 4 (lower is better)
Translates to: STPLPCPGTSRDSPWFPGSGPCQ*RSSPPA
Trigger: CGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGA...ACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AGACTGGGATGTCCATGGGCACGCGGATTGAGTAGGGTTTGTTCAGCCGCACCCGATCGGCATCATCCATaGCGGTGCCAGTGGTGGTGC +
Preference number: 4 (lower is better)
Translates to: RLGCPWARGLSRVCSAAPDRHHP*RCQWWC
Trigger: GCACCACCACTGGCACCGCCATGGATGATGCCGATC...GGGTGCGGCTGAACAAACCCTACTCAATCCGCGTGCCCATGGACATCCCAGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGGGTCCCTGTGAAGACTaGGATGTCCATGGGCACGCG +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLGPCED*DVHGHA
Trigger: CGCGTGCCCATGGACATCCCAGTCTTCACAGGGACC...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp CCACACCTTTTTCCCCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGATGAGCAGGTCGGCGTaGGTCCCTGTGAAGACTGGG +
Preference number: 4 (lower is better)
Translates to: PHLFPLEPGTAGFGLGGWMSRSA*VPVKTG
Trigger: CCCAGTCTTCACAGGGACCCACGCCGACCTGCTCAT...CCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGGGGAAAAAGGTGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGCTGGTGATGATCTTGTaGAACACCACAATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRLVMIL*NTTMSR
Trigger: CCTGCTCATTGTGGTGTTCCACAAGATCATCACCAG...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AGAGAAGAGCAGGTGGTTGTAGGGGATCCCGTAGCCCACAGGGTCATAGGCACAAGGGGCTGCAACCGCTaGTGCCCGCTGGTGATGATC +
Preference number: 4 (lower is better)
Translates to: REEQVVVGDPVAHRVIGTRGCNR*CPLVMI
Trigger: GATCATCACCAGCGGGCACCAGCGGTTGCAGCCCCT...TGTGCCTATGACCCTGTGGGCTACGGGATCCCCTACAACCACCTGCTCTTCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACTTCTCCTTCTCCGAGTaGCAGCCACTCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYFSFSE*QPLSAP
Trigger: GGGAGCTGAGAGTGGCTGCCACTCGGAGAAGGAGAA...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp CAGCACCTGCAGCAGCCTCATGATGGTCTGCAGCGGCAGCTTCGACTTCCAGGACTGGGGGCAGGTACATaGCCTCGGAGAAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: QHLQQPHDGLQRQLRLPGLGAGT*PRRSMS
Trigger: TGACATGCTTCTCCGAGGCCATGTACCTGCCCCCAG...TCCTGGAAGTCGAAGCTGCCGCTGCAGACCATCATGAGGCTGCTGCAGGTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCCTCGTCGGCTTCATCCTCACACCCGCTGTATCTCAAACAGCTTCACGTCGGTCGTCCACAGTGGGGCTaGCACTGCTGGCACTGTCGT +
Preference number: 4 (lower is better)
Translates to: PSSASSSHPLYLKQLHVGRPQWG*HCWHCR
Trigger: ACGACAGTGCCAGCAGTGCCAGCCCCACTGTGGACG...ACCGACGTGAAGCTGTTTGAGATACAGCGGGTGTGAGGATGAAGCCGACGAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCTCCTCCACCAGGGGTTCCCGGTAGTCAGAGAAGAGCAGGTGGTTGTAGGGGAAGAGGAACCAGGTGGTaGAGAAGGCCTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: PPPPGVPGSQRRAGGCRGRGTRW*RRPPAG
Trigger: ACCTGCTGGAGGCCTTCTCCACCACCTGGTTCCTCT...TCCCCTACAACCACCTGCTCTTCTCTGACTACCGGGAACCCCTGGTGGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACACCAGGTGGTGGTTCTaGGCGGCAGAGAAGAGGAAC +
Preference number: 4 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYTRWWF*AAEKRN
Trigger: GTTCCTCTTCTCTGCCGCCCAGAACCACCACCTGGT...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAAGGAAGAAGACCAGGTaGTGGTTCTGGGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTRKKTR*WFWAAE
Trigger: CTCTGCCGCCCAGAACCACCACCTGGTCTTCTTCCT...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGAGGTTGGCCAGCTGGTaGAAGATGCTGCGCTTGCGG +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLRLASW*KMLRLR
Trigger: CCGCAAGCGCAGCATCTTCCACCAGCTGGCCAACCT...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGGGCAGTGGTCTCTGGTaGGGGCATAGCCCCAGAGAT +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLGSGLW*GHSPRD
Trigger: ATCTCTGGGGCTATGCCCCCACCAGAGACCACTGCC...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCATTCTGCCTCTGGGGCTaGGTAGCACAGGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: NSWLWVRRLEAPPYPVQAFCLWG*VAQEWV
Trigger: CACCCACTCCTGTGCTACCCAGCCCCAGAGGCAGAA...TGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGGGCACAGTGACCCATTaGCTTCTGCCTCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLGTVTH*LLPLGL
Trigger: CAGCCCCAGAGGCAGAAGCCAATGGGTCACTGTGCC...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGCCCCTCATTACTaGGTAAGAGGGAGCCAGGCT +
Preference number: 4 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYPAPHY*VRGSQA
Trigger: AGCCTGGCTCCCTCTTACCCAGTAATGAGGGGCAGG...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGGTGAAGGATGAGGGGTaGCATCGCCCCATCCAGGCA +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLVKDEG*HRPIQA
Trigger: TGCCTGGATGGGGCGATGCCACCCCTCATCCTTCAC...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGCATGGGCACGCGGATTaGGTAGGGTTTGTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLHGHAD*VGFVQP
Trigger: CGGCTGAACAAACCCTACTCAATCCGCGTGCCCATG...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp GGCTGCAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCCATGGGCACGCGGATTaGGTAGGGTTTGTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: GCNRWCPLVMILWNTTMSHGHAD*VGFVQP
Trigger: CGGCTGAACAAACCCTACTCAATCCGCGTGCCCATG...GCTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR TCA 90 bp AACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCAGGTCGTGTGGAACACCACAATaGGCAGGTCGGCGTGGGTCC +
Preference number: 4 (lower is better)
Translates to: NRWCPLVMILWNTTMSRSCGTPQ*AGRRGS
Trigger: GGACCCACGCCGACCTGCTCATTGTGGTGTTCCACA...CGACCTGCTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR TCA 90 bp GCATCGTTGAGGAAGAAGAGGATGGGGACAAGGATGTCTAGGACGTCGCTGCTCGCTGCGTCTTGGTGGTaGGCTGGATCACCGCCTTCC +
Preference number: 4 (lower is better)
Translates to: ASLRKKRMGTRMSRTSLLAASWW*AGSPPS
Trigger: GGAAGGCGGTGATCCAGCTCACCACCAAGACGCAGC...GAGCAGCGACGTCCTAGACATCCTTGTCCCCATCCTCTTCTTCCTCAACGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR TCA 90 bp CCCTCGTCGGCTTCATCCTCACACCCGCTGTATCTCAAACAGCTTCACGTCGGTGGTGGCTCTGAACCGTaGAGTCCGGGCAGAAGAGCA +
Preference number: 4 (lower is better)
Translates to: PSSASSSHPLYLKQLHVGGGSEP*SPGRRA
Trigger: TGCTCTTCTGCCCGGACTTCACGGTTCAGAGCCACC...ACCGACGTGAAGCTGTTTGAGATACAGCGGGTGTGAGGATGAAGCCGACGAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp GGTTCCAGGGACCGCAAGGTGCCATCCTCTGACACCTGGGACTTCTCGGTCAGCATGAAGACACCAATGTaGATCAGGCCCACCCGAGAC +
Preference number: 4 (lower is better)
Translates to: GSRDRKVPSSDTWDFSVSMKTPM*IRPTRD
Trigger: GTCTCGGGTGGGCCTGATGCACATTGGTGTCTTCAT...GCTGACCGAGAAGTCCCAGGTGTCAGAGGATGGCACCTTGCGGTCCCTGGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp ACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACAGTCGAAGAGGGGCTaGAACCGCTGGTGCCCGCTG +
Preference number: 4 (lower is better)
Translates to: TAGSQTHPSGPCQCRSSPQSKRG*NRWCPL
Trigger: CAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTG...TGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp TTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCAGTGCAAACACATCCTaGACCGAGGTGGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: LGGWKHPLTLSRHLKGQPSANTS*TEVAVS
Trigger: AGACACAGCCACCTCGGTGCAGGATGTGTTTGCACT...GGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp AACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCAGGTCGCTGCCGAGTCCACAGTaGTCCTCCGGTGGCTCTGAA +
Preference number: 4 (lower is better)
Translates to: NRWCPLVMILWNTTMSRSLPSPQ*SSGGSE
Trigger: TTCAGAGCCACCGGAGGAGCACTGTGGACTCGGCAG...CGACCTGCTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp TCCCTTCCCTGCCCCTCATTACTGGGTAAGAGGGAGCCAGGCTATTTCCATGGACAGTGGGGCTGGCACTaGTGGCACTGTCGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: SLPCPSLLGKREPGYFHGQWGWH*WHCRGP
Trigger: TGGACCACGACAGTGCCAGCAGTGCCAGCCCCACTG...TCCATGGAAATAGCCTGGCTCCCTCTTACCCAGTAATGAGGGGCAGGGAAGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACAAGGCCTCCAGCAGGTaGAGCAACTTGTTGGCAGTC +
Preference number: 4 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYKASSR*SNLLAV
Trigger: GACTGCCAACAAGTTGCTGCACCTGCTGGAGGCCTT...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp ACTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCAGGCGTTGGGCTCCACTaGCCACTGGCTGATGAGGTG +
Preference number: 4 (lower is better)
Translates to: THPSGPCQCRSSPPAEPAGVGLH*PLADEV
Trigger: CACCTCATCAGCCAGTGGGCAGTGGAGCCCAACGCC...TGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp AACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACAGATCTTCTCCACCTaGGGAACCAGCACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: NSWLWVRRLEAPPYPVQAQIFST*GTSTCS
Trigger: GCTGCAGGTGCTGGTTCCGCAGGTGGAGAAGATCTG...TGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp GGCTGCAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCACCAGGGTGCCATGCTaGAGGAACCGCAGGATCTCA +
Preference number: 4 (lower is better)
Translates to: GCNRWCPLVMILWNTTMSTRVPC*RNRRIS
Trigger: TGAGATCCTGCGGTTCCTGCAGCATGGCACCCTGGT...GCTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACACAAGGATACGGGAGGTaGCCCAGTCTGGCTTTTGCA +
Preference number: 4 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTQGYGR*PSLAFA
Trigger: TGCAAAAGCCAGACTGGGGCACCTCCCGTATCCTTG...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACACAGGTTCTCAGGGCCTaGAGGATCGGCATCATCCAT +
Preference number: 4 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTQVLRA*RIGIIH
Trigger: ATGGATGATGCCGATCCTCCAGGCCCTGAGAACCTG...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTACTAGCAGCTCCTGGTaGAACTGGATCTTCTTGGTG +
Preference number: 4 (lower is better)
Translates to: STPLPCPGTSRDSPWFPGTSSSW*NWIFLV
Trigger: CACCAAGAAGATCCAGTTCCACCAGGAGCTGCTAGT...ACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp ACCACGATGGTGAGCAGGCAGTCGAAGAGGGGCTGCAACCGCTGGTGCCCGCTGAGAACTAGCAGCTCCTaGTGGAACTGGATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: TTMVSRQSKRGCNRWCPLRTSSS*WNWIFL
Trigger: CAAGAAGATCCAGTTCCACCAGGAGCTGCTAGTTCT...CAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTGCCTGCTCACCATCGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCACACCTTTTTCCCCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGGTCTTGGTGGTGAGCTaGATCACCGCCTTCCGGAAG +
Preference number: 4 (lower is better)
Translates to: PHLFPLEPGTAGFGLGGWVLVVS*ITAFRK
Trigger: CTTCCGGAAGGCGGTGATCCAGCTCACCACCAAGAC...CCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGGGGAAAAAGGTGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp GGCTGCAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCGTCTTGGTGGTGAGCTaGATCACCGCCTTCCGGAAG +
Preference number: 4 (lower is better)
Translates to: GCNRWCPLVMILWNTTMSVLVVS*ITAFRK
Trigger: CTTCCGGAAGGCGGTGATCCAGCTCACCACCAAGAC...GCTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACACCTTGTAGCACAGGGTaGCCAAGTTGGAGGGTGACT +
Preference number: 4 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTPCSTG*PSWRVT
Trigger: AGTCACCCTCCAACTTGGCCACCCTGTGCTACAAGG...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGCTGGGGGCAGGTACATaGCCTCGGAGAAGCATGTCA +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLLGAGT*PRRSMS
Trigger: TGACATGCTTCTCCGAGGCCATGTACCTGCCCCCAG...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp ACTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCAGCCACTTTCCGGAGCTaGGGGCAGGTACATGGCCTC +
Preference number: 4 (lower is better)
Translates to: THPSGPCQCRSSPPAEPAATFRS*GQVHGL
Trigger: GAGGCCATGTACCTGCCCCCAGCTCCGGAAAGTGGC...TGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp TTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCCTGCTGGCACTGTCGTaGTCCAAAGTGACAATGAGC +
Preference number: 4 (lower is better)
Translates to: LGGWKHPLTLSRHLKGQPLLALS*SKVTMS
Trigger: GCTCATTGTCACTTTGGACCACGACAGTGCCAGCAG...GGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp CCCTCGTCGGCTTCATCCTCACACCCGCTGTATCTCAAACAGCTTCACGTCGGTTGGGGCTGGCACTGCTaGCACTGTCGTGGTCCAAAG +
Preference number: 4 (lower is better)
Translates to: PSSASSSHPLYLKQLHVGWGWHC*HCRGPK
Trigger: CTTTGGACCACGACAGTGCCAGCAGTGCCAGCCCCA...ACCGACGTGAAGCTGTTTGAGATACAGCGGGTGTGAGGATGAAGCCGACGAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAAGAAGAGGAACCAGGTaGTGGAGAAGGCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTRRGTR*WRRPPA
Trigger: TGCTGGAGGCCTTCTCCACCACCTGGTTCCTCTTCT...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACAAGAAGACCAGGTGGTaGTTCTGGGCGGCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYKKTRW*FWAAEK
Trigger: CTTCTCTGCCGCCCAGAACCACCACCTGGTCTTCTT...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp ACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCAGGGCCTTGTGAATGGTaGGCGGGTCCGTGGGCAGGT +
Preference number: 4 (lower is better)
Translates to: TAGSQTHPSGPCQCRSSPGPCEW*AGPWAG
Trigger: ACCTGCCCACGGACCCGCCCACCATTCACAAGGCCC...TGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACACCATCCTCTGACACCTaGGACTTCTCGGTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTPSSDT*DFSVSL
Trigger: CAAGCTGACCGAGAAGTCCCAGGTGTCAGAGGATGG...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp ACTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCAGGCTCCACTGCCCACTaGCTGATGAGGTGGACGGTC +
Preference number: 4 (lower is better)
Translates to: THPSGPCQCRSSPPAEPAGSTAH*LMRWTV
Trigger: GACCGTCCACCTCATCAGCCAGTGGGCAGTGGAGCC...TGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp GGGCTGCAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGGTGCCCGAGTTGGCCTaGTACTTGCGGATGAGGATG +
Preference number: 4 (lower is better)
Translates to: GLQPLVPAGDDLVEHHNEVPELA*YLRMRM
Trigger: CATCCTCATCCGCAAGTACCAGGCCAACTCGGGCAC...CTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp AACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCAGGTCGAGGTGCGGAACCACATaGCAGTGCCCGAGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: NRWCPLVMILWNTTMSRSRCGTT*QCPSWP
Trigger: AGGCCAACTCGGGCACTGCCATGTGGTTCCGCACCT...CGACCTGCTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACACAGTTCACATTGTCCTaGCCACAGGGGTCTCTAGGG +
Preference number: 4 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTQFTLS*PQGSLG
Trigger: CCCTAGAGACCCCTGTGGCCAGGACAATGTGAACTG...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp ACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACGGCCCGGGCATCGTTaGGGAAGAAGAGGATGGGGA +
Preference number: 4 (lower is better)
Translates to: TAGSQTHPSGPCQCRSSPRPGHR*GRRGWG
Trigger: TCCCCATCCTCTTCTTCCTCAACGATGCCCGGGCCG...TGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR TCA 90 bp ACTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCATGCTGCGCTTGCGGATaGTGGCGTAGACCAGGTTGG +
Preference number: 4 (lower is better)
Translates to: THPSGPCQCRSSPPAEPACCACG*WRRPGW
Trigger: CCAACCTGGTCTACGCCATCATCCGCAAGCGCAGCA...TGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR TCA 90 bp CCATGCTGCAGGAACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGCAAGGTGCCATCCTCTaGCACCTGGGACTTCTCGGT +
Preference number: 4 (lower is better)
Translates to: PCCRNRRISDSSVRPLSMQGAIL*HLGLLG
Trigger: ACCGAGAAGTCCCAGGTGTCAGAGGATGGCACCTTG...CATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGTTCCTGCAGCATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp GCATCGTTGAGGAAGAAGAGGATGGGGACAAGGATGTCTAGGACGTCGCTGCTCGGCTGCAACCGCTGGTaGCCGCTGGTGATGATCTTG +
Preference number: 4 (lower is better)
Translates to: ASLRKKRMGTRMSRTSLLGCNRW*PLVMIL
Trigger: CAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCC...GAGCAGCGACGTCCTAGACATCCTTGTCCCCATCCTCTTCTTCCTCAACGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp TCCCTTCCCTGCCCCTCATTACTGGGTAAGAGGGAGCCAGGCTATTTCCATGGACCACTCTCAGCTCCCTaGACCAGCTTCTCAACGGCC +
Preference number: 4 (lower is better)
Translates to: SLPCPSLLGKREPGYFHGPLSAP*TSFSTA
Trigger: GGCCGTTGAGAAGCTGGTGCAGGGAGCTGAGAGTGG...TCCATGGAAATAGCCTGGCTCCCTCTTACCCAGTAATGAGGGGCAGGGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACACAGTTCAGGACGATCTaGTTCTCCTTCTCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTQFRTI*FSFSEW
Trigger: CCACTCGGAGAAGGAGAAGCAGATCGTCCTGAACTG...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGAGCCTCATGATGGTCTaGAGCGGCAGCTTCGACTTC +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLSLMMV*SGSFDF
Trigger: GAAGTCGAAGCTGCCGCTGCAGACCATCATGAGGCT...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp GGGCTGCAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGAGCCTCATGATGGTCTaGAGCGGCAGCTTCGACTTC +
Preference number: 4 (lower is better)
Translates to: GLQPLVPAGDDLVEHHNESLMMV*SGSFDF
Trigger: GAAGTCGAAGCTGCCGCTGCAGACCATCATGAGGCT...CTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp CCCTCGTCGGCTTCATCCTCACACCCGCTGTATCTCAAACAGCTTCACGTCGGTTGCGGAACCAGCACCTaGAGCAGCCTCATGATGGTC +
Preference number: 4 (lower is better)
Translates to: PSSASSSHPLYLKQLHVGCGTST*SSLMMV
Trigger: GACCATCATGAGGCTGCTGCAGGTGCTGGTTCCGCA...ACCGACGTGAAGCTGTTTGAGATACAGCGGGTGTGAGGATGAAGCCGACGAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp CTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCACCAGATCTTCTCCACCTaGGGAACCAGCACCTGCAGC +
Preference number: 4 (lower is better)
Translates to: LIRQALVNADLLHLRNQHQIFST*GTSTCS
Trigger: GCTGCAGGTGCTGGTTCCGCAGGTGGAGAAGATCTG...GTGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp CCTCCTCCACCAGGGGTTCCCGGTAGTCAGAGAAGAGCAGGTGGTTGTAGGGGATCATCCTCTTCTCCCTaGAGAAGAAGCCCCTCCAGT +
Preference number: 4 (lower is better)
Translates to: PPPPGVPGSQRRAGGCRGSSSSP*RRSPSS
Trigger: ACTGGAGGGGCTTCTTCTGCAGGGAGAAGAGGATGA...TCCCCTACAACCACCTGCTCTTCTCTGACTACCGGGAACCCCTGGTGGAGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp GGCTGCAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCCAGGTTCTCAGGGCCTaGAGGATCGGCATCATCCAT +
Preference number: 4 (lower is better)
Translates to: GCNRWCPLVMILWNTTMSQVLRA*RIGIIH
Trigger: ATGGATGATGCCGATCCTCCAGGCCCTGAGAACCTG...GCTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCACACCTTTTTCCCCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAAAGGCATCATCGGTaGCTTCCACGGGCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: PHLFPLEPGTAGFGLGGWKRHHR*LPRAAS
Trigger: AGACGCAGCCCGTGGAAGCCACCGATGATGCCTTTT...CCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGGGGAAAAAGGTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGACTGAACCCATGGGTTaGTGCTGCCACTTTCCGGAG +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLTEPMG*CCHFPE
Trigger: CTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGT...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCAGGTGCAGCAACTTGTTaGCAGTCACCATGGACAGGC +
Preference number: 4 (lower is better)
Translates to: NSWLWVRRLEAPPYPVQAGAATC*QSPWTG
Trigger: GCCTGTCCATGGTGACTGCCAACAAGTTGCTGCACC...TGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp GGCTGCAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCGGTGCAGCAACTTGTTaGCAGTCACCATGGACAGGC +
Preference number: 4 (lower is better)
Translates to: GCNRWCPLVMILWNTTMSGAATC*QSPWTG
Trigger: GCCTGTCCATGGTGACTGCCAACAAGTTGCTGCACC...GCTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp AGACTGGGATGTCCATGGGCACGCGGATTGAGTAGGGTTTGTTCAGCCGCACCCAGAAGAGGAACCAGGTaGTGGAGAAGGCCTCCAGCA +
Preference number: 4 (lower is better)
Translates to: RLGCPWARGLSRVCSAAPRRGTR*WRRPPA
Trigger: TGCTGGAGGCCTTCTCCACCACCTGGTTCCTCTTCT...GGGTGCGGCTGAACAAACCCTACTCAATCCGCGTGCCCATGGACATCCCAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp AGACTGGGATGTCCATGGGCACGCGGATTGAGTAGGGTTTGTTCAGCCGCACCCAAGAAGACCAGGTGGTaGTTCTGGGCGGCAGAGAAG +
Preference number: 4 (lower is better)
Translates to: RLGCPWARGLSRVCSAAPKKTRW*FWAAEK
Trigger: CTTCTCTGCCGCCCAGAACCACCACCTGGTCTTCTT...GGGTGCGGCTGAACAAACCCTACTCAATCCGCGTGCCCATGGACATCCCAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp GCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGAGCAGCCGAGTTGCCATCAAACTaGTACTGGATGATGTTGTTG +
Preference number: 4 (lower is better)
Translates to: APVWLLQSASSQPPRGAAELPSN*YWMMLL
Trigger: CAACAACATCATCCAGTACCAGTTTGATGGCAACTC...GGCTGCTCCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCATTTGGGTTAGGAGGCTaGAAGCACCCCCTTACCCTG +
Preference number: 4 (lower is better)
Translates to: NSWLWVRRLEAPPYPVQAFGLGG*KHPLTL
Trigger: CAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCAAA...TGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACACACCTTTTTCCCCTaGAGCCTGGAACAGCTGGCT +
Preference number: 4 (lower is better)
Translates to: NSWLWVRRLEAPPYPVQAHTFFP*SLEQLA
Trigger: AGCCAGCTGTTCCAGGCTCCAGGGGAAAAAGGTGTG...TGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000425042.7
3UTR CAA 72 bp TGGAGCAGGGGGTTGGACAGCAGCCGGGCTATACCCTaGAGGATGAACTGGAAGTCCTCCTCACGATGGATG +
Preference number: 4 (lower is better)
Translates to: WSRGLDSSRAIP*RMNWKSSSRWM
Trigger: CATCCATCGTGAGGAGGACTTCCAGTTCATCCTCAAGGGTATAGCCCGGCTGCTGTCCAACCCCCTGCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGCCTCCTCACGATGGATaGGGGACAGGTAGTTCACAA +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLPPHDG*GTGSSQ
Trigger: TTGTGAACTACCTGTCCCGCATCCATCGTGAGGAGG...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp CCACACCTTTTTCCCCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGATGAAGACACCAATGTaGATCAGGCCCACCCGAGAC +
Preference number: 4 (lower is better)
Translates to: PHLFPLEPGTAGFGLGGWMKTPM*IRPTRD
Trigger: GTCTCGGGTGGGCCTGATGCACATTGGTGTCTTCAT...CCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGGGGAAAAAGGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp CCATGCTGCAGGAACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGCGAGGTGGCTGTGTCTaGCCAGAACTGGTCCCAAAA +
Preference number: 4 (lower is better)
Translates to: PCCRNRRISDSSVRPLSMRGGCV*PELVPK
Trigger: TTTTGGGACCAGTTCTGGGCAGACACAGCCACCTCG...CATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGTTCCTGCAGCATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp TCCCTTCCCTGCCCCTCATTACTGGGTAAGAGGGAGCCAGGCTATTTCCATGGATGCTGCCGGCACCAGTaGAAACACATCCTGCACCGA +
Preference number: 4 (lower is better)
Translates to: SLPCPSLLGKREPGYFHGCCRHQ*KHILHR
Trigger: TCGGTGCAGGATGTGTTTGCACTGGTGCCGGCAGCA...TCCATGGAAATAGCCTGGCTCCCTCTTACCCAGTAATGAGGGGCAGGGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp TCCCTTCCCTGCCCCTCATTACTGGGTAAGAGGGAGCCAGGCTATTTCCATGGATGCGGAACCAGCACCTaGAGCAGCCTCATGATGGTC +
Preference number: 4 (lower is better)
Translates to: SLPCPSLLGKREPGYFHGCGTST*SSLMMV
Trigger: GACCATCATGAGGCTGCTGCAGGTGCTGGTTCCGCA...TCCATGGAAATAGCCTGGCTCCCTCTTACCCAGTAATGAGGGGCAGGGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGCCCTTGAGGATGAACTaGAAGTCCTCCTCACGATGG +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLPLRMN*KSSSRW
Trigger: CCATCGTGAGGAGGACTTCCAGTTCATCCTCAAGGG...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp CCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCAAACCAGCTCCTGGTGGAACTaGATCTTCTTGGTGGAGTTA +
Preference number: 4 (lower is better)
Translates to: PLPCPGTSRDSPWFPGQTSSWWN*IFLVEL
Trigger: TAACTCCACCAAGAAGATCCAGTTCCACCAGGAGCT...GGTTTGACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp TTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCAGAACTAGCAGCTCCTaGTGGAACTGGATCTTCTTG +
Preference number: 4 (lower is better)
Translates to: LGGWKHPLTLSRHLKGQPRTSSS*WNWIFL
Trigger: CAAGAAGATCCAGTTCCACCAGGAGCTGCTAGTTCT...GGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp CCCTCGTCGGCTTCATCCTCACACCCGCTGTATCTCAAACAGCTTCACGTCGGTTCCGGAAGTTCAGCTTaGAGTCGGTCGACCCCATGT +
Preference number: 4 (lower is better)
Translates to: PSSASSSHPLYLKQLHVGSGSSA*SRSTPC
Trigger: ACATGGGGTCGACCGACTCCAAGCTGAACTTCCGGA...ACCGACGTGAAGCTGTTTGAGATACAGCGGGTGTGAGGATGAAGCCGACGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCACACCTTTTTCCCCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGGTGTCTGCCCAGAACTaGTCCCAAAAGGCATCATCG +
Preference number: 4 (lower is better)
Translates to: PHLFPLEPGTAGFGLGGWVSAQN*SQKASS
Trigger: CGATGATGCCTTTTGGGACCAGTTCTGGGCAGACAC...CCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGGGGAAAAAGGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp GCATCGTTGAGGAAGAAGAGGATGGGGACAAGGATGTCTAGGACGTCGCTGCTCAGGAAGAAGACCAGGTaGTGGTTCTGGGCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: ASLRKKRMGTRMSRTSLLRKKTR*WFWAAE
Trigger: CTCTGCCGCCCAGAACCACCACCTGGTCTTCTTCCT...GAGCAGCGACGTCCTAGACATCCTTGTCCCCATCCTCTTCTTCCTCAACGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp AACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACAGCTTGTCAATGCCTaGAGTAGCCACCAGACTGGT +
Preference number: 4 (lower is better)
Translates to: NSWLWVRRLEAPPYPVQAQLVNA*SSHQTG
Trigger: ACCAGTCTGGTGGCTACTCCAGGCATTGACAAGCTG...TGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp GAGCAGGGGGTTGGACAGCAGCCGGGCTATACCCTTGAGGATGAACTGGAAGTCCAGCTTGTCAATGCCTaGAGTAGCCACCAGACTGGT +
Preference number: 4 (lower is better)
Translates to: EQGVGQQPGYTLEDELEVQLVNA*SSHQTG
Trigger: ACCAGTCTGGTGGCTACTCCAGGCATTGACAAGCTG...GACTTCCAGTTCATCCTCAAGGGTATAGCCCGGCTGCTGTCCAACCCCCTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp TCCCTTCCCTGCCCCTCATTACTGGGTAAGAGGGAGCCAGGCTATTTCCATGGAGTGCCCGAGTTGGCCTaGTACTTGCGGATGAGGATG +
Preference number: 4 (lower is better)
Translates to: SLPCPSLLGKREPGYFHGVPELA*YLRMRM
Trigger: CATCCTCATCCGCAAGTACCAGGCCAACTCGGGCAC...TCCATGGAAATAGCCTGGCTCCCTCTTACCCAGTAATGAGGGGCAGGGAAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp CCACACCTTTTTCCCCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGTGGAACAGCTGGCTTTaGGTTAGGAGGCTGGAAGCA +
Preference number: 4 (lower is better)
Translates to: PHLFPLEPGTAGFGLGGWWNSWL*VRRLEA
Trigger: TGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCA...CCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGGGGAAAAAGGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGTTTTCCCCTGGAGCCTaGAACAGCTGGCTTTGGGTT +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLFSPGA*NSWLWV
Trigger: AACCCAAAGCCAGCTGTTCCAGGCTCCAGGGGAAAA...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp AAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCTTAGGGCACAGTGACCCATTGGTGGAACAAAAGAACTaGACCCATGGGTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: KGQPVVPWSNPLGHSDPLVEQKN*THGLVL
Trigger: CAGCACCAACCCATGGGTTCAGTTCTTTTGTTCCAC...CAATGGGTCACTGTGCCCTAAGGGGTTTGACCAGGGAACCACGGGCTGTCCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp CTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCACCATTCCTCAGATAGATaGCGCCCCACATGTAGGTGC +
Preference number: 4 (lower is better)
Translates to: LIRQALVNADLLHLRNQHHSSDR*RPTCRC
Trigger: GCACCTACATGTGGGGCGTCATCTATCTGAGGAATG...GTGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR TCA 90 bp TCCCTTCCCTGCCCCTCATTACTGGGTAAGAGGGAGCCAGGCTATTTCCATGGAGGGTTGAGGGGGATCTaGGCCAGTTCACATTGTCCT +
Preference number: 4 (lower is better)
Translates to: SLPCPSLLGKREPGYFHGGLRGI*ASSHCP
Trigger: AGGACAATGTGAACTGGCTCAGATCCCCCTCAACCC...TCCATGGAAATAGCCTGGCTCCCTCTTACCCAGTAATGAGGGGCAGGGAAGGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp AGAGCTTCCAGAAGAGAACTAGCAGCTCCTGGTGGAACTGGATCTTCTTGGTGGCATCATCCATGGCGGTaGCAGTGGTGGTGCCGTCCA +
Preference number: 4 (lower is better)
Translates to: RASRRELAAPGGTGSSWWHHPWR*QWWCRP
Trigger: TGGACGGCACCACCACTGGCACCGCCATGGATGATG...CCACCAAGAAGATCCAGTTCCACCAGGAGCTGCTAGTTCTCTTCTGGAAGCTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp CAGAAGAGAACTAGCAGCTCCTGGTGGAACTGGATCTTCTTGGTGGAGTTAGGCCCACTCTCAGCTCCCTaGACCAGCTTCTCAACGGCC +
Preference number: 4 (lower is better)
Translates to: QKRTSSSWWNWIFLVELGPLSAP*TSFSTA
Trigger: GGCCGTTGAGAAGCTGGTGCAGGGAGCTGAGAGTGG...GCCTAACTCCACCAAGAAGATCCAGTTCCACCAGGAGCTGCTAGTTCTCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAAGACCAGGTTGGAGTTaGCATCAAACTGGTACTGGA +
Preference number: 4 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTRPGWS*HQTGTG
Trigger: TCCAGTACCAGTTTGATGGCAACTCCAACCTGGTCT...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp CTGGCACTGCTGGCACTGTCGTGGTCCAAAGTGACAATGAGCACCTGGGCAGCCAGACCAGGTTGGAGTTaGCATCAAACTGGTACTGGA +
Preference number: 4 (lower is better)
Translates to: LALLALSWSKVTMSTWAARPGWS*HQTGTG
Trigger: TCCAGTACCAGTTTGATGGCAACTCCAACCTGGTCT...GGCTGCCCAGGTGCTCATTGTCACTTTGGACCACGACAGTGCCAGCAGTGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp AGAGAAGAGCAGGTGGTTGTAGGGGATCCCGTAGCCCACAGGGTCATAGGCACACCCTTGAGGATGAACTaGAAGTCCTCCTCACGATGG +
Preference number: 4 (lower is better)
Translates to: REEQVVVGDPVAHRVIGTPLRMN*KSSSRW
Trigger: CCATCGTGAGGAGGACTTCCAGTTCATCCTCAAGGG...TGTGCCTATGACCCTGTGGGCTACGGGATCCCCTACAACCACCTGCTCTTCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCTCCTCCACCAGGGGTTCCCGGTAGTCAGAGAAGAGCAGGTGGTTGTAGGGGACTGGTGATGATCTTGTaGAACACCACAATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: PPPPGVPGSQRRAGGCRGLVMIL*NTTMSR
Trigger: CCTGCTCATTGTGGTGTTCCACAAGATCATCACCAG...TCCCCTACAACCACCTGCTCTTCTCTGACTACCGGGAACCCCTGGTGGAGGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp ACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCATTCTCCTTCTCCGAGTaGCAGCCACTCTCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: TAGSQTHPSGPCQCRSSPFSFSE*QPLSAP
Trigger: GGGAGCTGAGAGTGGCTGCCACTCGGAGAAGGAGAA...TGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACAAAGAACTGAACCCATaGGTTGGTGCTGCCACTTTC +
Preference number: 4 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYKELNP*VGAATF
Trigger: GAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTT...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCAGGTCGCTGCTGGCACTGTCGTaGTCCAAAGTGACAATGAGC +
Preference number: 4 (lower is better)
Translates to: NRWCPLVMILWNTTMSRSLLALS*SKVTMS
Trigger: GCTCATTGTCACTTTGGACCACGACAGTGCCAGCAG...CGACCTGCTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCACACCTTTTTCCCCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGTGGCGTAGACCAGGTTaGAGTTGCCATCAAACTGGT +
Preference number: 4 (lower is better)
Translates to: PHLFPLEPGTAGFGLGGWWRRPG*SCHQTG
Trigger: ACCAGTTTGATGGCAACTCCAACCTGGTCTACGCCA...CCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGGGGAAAAAGGTGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACAGAGGAATTTCTTGTTaGAGTCGCAGAGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYRGISC*SRRASR
Trigger: TCTGGAAGCTCTGCGACTTCAACAAGAAATTCCTCT...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR TCA 90 bp CACTTTCCGGAGCTGGGGGCAGGTACATGGCCTCGGAGAAGCATGTCAGCAGCAAGAGGAATTTCTTGTTaGAGTCGCAGAGCTTCCAGA +
Preference number: 4 (lower is better)
Translates to: HFPELGAGTWPRRSMSAARGISC*SRRASR
Trigger: TCTGGAAGCTCTGCGACTTCAACAAGAAATTCCTCT...TGCTGCTGACATGCTTCTCCGAGGCCATGTACCTGCCCCCAGCTCCGGAAAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR TCA 90 bp AACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGCAGGTCGGTGGAACAAAAGAACTaGACCCATGGGTTGGTGCTG +
Preference number: 4 (lower is better)
Translates to: NRWCPLVMILWNTTMSRSVEQKN*THGLVL
Trigger: CAGCACCAACCCATGGGTTCAGTTCTTTTGTTCCAC...CGACCTGCTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp GTGGAAGATGCTGCGCTTGCGGATGATGGCGTAGACCAGGTTGGAGTTGCCATCTGTCTAGGACGTCGCTaGTCTTCAGCACGAAGAAGA +
Preference number: 4 (lower is better)
Translates to: VEDAALADDGVDQVGVAICLGRR*SSARRR
Trigger: TCTTCTTCGTGCTGAAGAGCAGCGACGTCCTAGACA...GATGGCAACTCCAACCTGGTCTACGCCATCATCCGCAAGCGCAGCATCTTCCAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp AGCAGCCGGGCTATACCCTTGAGGATGAACTGGAAGTCCTCCTCACGATGGATGAGTGCAAACACATCCTaGACCGAGGTGGCTGTGTCT +
Preference number: 4 (lower is better)
Translates to: SSRAIPLRMNWKSSSRWMSANTS*TEVAVS
Trigger: AGACACAGCCACCTCGGTGCAGGATGTGTTTGCACT...CATCCATCGTGAGGAGGACTTCCAGTTCATCCTCAAGGGTATAGCCCGGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR GCA 90 bp GCATCGTTGAGGAAGAAGAGGATGGGGACAAGGATGTCTAGGACGTCGCTGCTCCAGTTCAGGACGATCTaGTTCTCCTTCTCCGAGTGG +
Preference number: 4 (lower is better)
Translates to: ASLRKKRMGTRMSRTSLLQFRTI*FSFSEW
Trigger: CCACTCGGAGAAGGAGAAGCAGATCGTCCTGAACTG...GAGCAGCGACGTCCTAGACATCCTTGTCCCCATCCTCTTCTTCCTCAACGATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp AGCACGAAGAAGAGGAATTTCTTGTTGAAGTCGCAGAGCTTCCAGAAGAGAACTTGGCGGTGCCAGTGGTaGTGCCGTCCACAGTGGGGC +
Preference number: 4 (lower is better)
Translates to: STKKRNFLLKSQSFQKRTWRCQW*CRPQWG
Trigger: GCCCCACTGTGGACGGCACCACCACTGGCACCGCCA...AGTTCTCTTCTGGAAGCTCTGCGACTTCAACAAGAAATTCCTCTTCTTCGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp GAGCAGGGGGTTGGACAGCAGCCGGGCTATACCCTTGAGGATGAACTGGAAGTCAGCTCCTGGTGGAACTaGATCTTCTTGGTGGAGTTA +
Preference number: 4 (lower is better)
Translates to: EQGVGQQPGYTLEDELEVSSWWN*IFLVEL
Trigger: TAACTCCACCAAGAAGATCCAGTTCCACCAGGAGCT...GACTTCCAGTTCATCCTCAAGGGTATAGCCCGGCTGCTGTCCAACCCCCTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp ACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCAAAAAGGCATCATCGGTaGCTTCCACGGGCTGCGTCT +
Preference number: 4 (lower is better)
Translates to: TAGSQTHPSGPCQCRSSPKRHHR*LPRAAS
Trigger: AGACGCAGCCCGTGGAAGCCACCGATGATGCCTTTT...TGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp AGACTGGGATGTCCATGGGCACGCGGATTGAGTAGGGTTTGTTCAGCCGCACCCAAAGAACTGAACCCATaGGTTGGTGCTGCCACTTTC +
Preference number: 4 (lower is better)
Translates to: RLGCPWARGLSRVCSAAPKELNP*VGAATF
Trigger: GAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTT...GGGTGCGGCTGAACAAACCCTACTCAATCCGCGTGCCCATGGACATCCCAGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp TCGTTGAGGAAGAAGAGGATGGGGACAAGGATGTCTAGGACGTCGCTGCTCTTCCCATCCTCTGACACCTaGGACTTCTCGGTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: SLRKKRMGTRMSRTSLLFPSSDT*DFSVSL
Trigger: CAAGCTGACCGAGAAGTCCCAGGTGTCAGAGGATGG...GAAGAGCAGCGACGTCCTAGACATCCTTGTCCCCATCCTCTTCTTCCTCAACGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR TCA 90 bp AACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCATCAGAAGCAGCAAGATaGAGACACCAATGTGCATCA +
Preference number: 4 (lower is better)
Translates to: NSWLWVRRLEAPPYPVQASEAAR*RHQCAS
Trigger: TGATGCACATTGGTGTCTTCATCTTGCTGCTTCTGA...TGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR GCA 90 bp ACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCATCAGGCCCTTGTCAATaGAGATCTTCTCCACCTGCG +
Preference number: 4 (lower is better)
Translates to: TAGSQTHPSGPCQCRSSPSGPCQ*RSSPPA
Trigger: CGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGA...TGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp AGAGCTTCCAGAAGAGAACTAGCAGCTCCTGGTGGAACTGGATCTTCTTGGTGGCCTTGTAGCACAGGGTaGCCAAGTTGGAGGGTGACT +
Preference number: 4 (lower is better)
Translates to: RASRRELAAPGGTGSSWWPCSTG*PSWRVT
Trigger: AGTCACCCTCCAACTTGGCCACCCTGTGCTACAAGG...CCACCAAGAAGATCCAGTTCCACCAGGAGCTGCTAGTTCTCTTCTGGAAGCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCCATCAAACTGGTACTaGATGATGTTGTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYPSNWY*MMLLKT
Trigger: GGTCTTCAACAACATCATCCAGTACCAGTTTGATGG...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AGCACGAAGAAGAGGAATTTCTTGTTGAAGTCGCAGAGCTTCCAGAAGAGAACTTCTGGAGCAGGGGGTTaGACAGCAGCCGGGCTATAC +
Preference number: 4 (lower is better)
Translates to: STKKRNFLLKSQSFQKRTSGAGG*TAAGLY
Trigger: GTATAGCCCGGCTGCTGTCCAACCCCCTGCTCCAGA...AGTTCTCTTCTGGAAGCTCTGCGACTTCAACAAGAAATTCCTCTTCTTCGTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp CCATGCTGCAGGAACCGCAGGATCTCAGACTCATCCGTCAGGCCCTTGTCAATGGAGTTGCCATCAAACTaGTACTGGATGATGTTGTTG +
Preference number: 4 (lower is better)
Translates to: PCCRNRRISDSSVRPLSMELPSN*YWMMLL
Trigger: CAACAACATCATCCAGTACCAGTTTGATGGCAACTC...CATTGACAAGGGCCTGACGGATGAGTCTGAGATCCTGCGGTTCCTGCAGCATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CCA 90 bp TCCCTTCCCTGCCCCTCATTACTGGGTAAGAGGGAGCCAGGCTATTTCCATGGAGCCAGGCTATTTCCATaGATCCAGGAGAATATAGCA +
Preference number: 4 (lower is better)
Translates to: SLPCPSLLGKREPGYFHGARLFP*IQENIA
Trigger: TGCTATATTCTCCTGGATCCATGGAAATAGCCTGGC...TCCATGGAAATAGCCTGGCTCCCTCTTACCCAGTAATGAGGGGCAGGGAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CCA 90 bp AGCAGCCGGGCTATACCCTTGAGGATGAACTGGAAGTCCTCCTCACGATGGATGCCATCAAACTGGTACTaGATGATGTTGTTGAAGACC +
Preference number: 4 (lower is better)
Translates to: SSRAIPLRMNWKSSSRWMPSNWY*MMLLKT
Trigger: GGTCTTCAACAACATCATCCAGTACCAGTTTGATGG...CATCCATCGTGAGGAGGACTTCCAGTTCATCCTCAAGGGTATAGCCCGGCTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CAA 90 bp CAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGGGTCCGTGGGCCACCAGACTGGTCTaGAGGGTGCCTGGCTCTGCA +
Preference number: 5 (lower is better)
Translates to: QVSAGAAAGPCEWWAGPWATRLV*RVPGSA
Trigger: TGCAGAGCCAGGCACCCTCAAGACCAGTCTGGTGGC...CCACGGACCCGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CAA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGGGACCCACTCTGGCGTaGGGCTCCACTGCCCACTGG +
Preference number: 5 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRGPTLA*GSTAHW
Trigger: CCAGTGGGCAGTGGAGCCCAACGCCAGAGTGGGTCC...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS CCA 90 bp GGGGTCGGCCAGCCTTGGGGGACTGGGACACAGGCCAGAGCAGCTTaGAGCATCAGGACAGCCAGGGCCCAGCTAGCCACTGGATGGCTG +
Preference number: 5 (lower is better)
Translates to: GVGQPWGTGTQARAA*SIRTARAQLATGWL
Trigger: CAGCCATCCAGTGGCTAGCTGGGCCCTGGCTGTCCTGATGCTCCAAGCTGCTCTGGCCTGTGTCCCAGTCCCCCAAGGCTGGCCGACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS CCA 90 bp GGCAGAGGAGCCACCTGGAGTTGGGGTCGGCCAGCCTTGGGGGACTaGGACACAGGCCAGAGCAGCTTGGAGCATCAGGACAGCCAGGGC +
Preference number: 5 (lower is better)
Translates to: GRGATWSWGRPALGD*DTGQSSLEHQDSQG
Trigger: GCCCTGGCTGTCCTGATGCTCCAAGCTGCTCTGGCCTGTGTCCCAGTCCCCCAAGGCTGGCCGACCCCAACTCCAGGTGGCTCCTCTGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS TCA 90 bp CTGGGCAGCCCTCACCTTGTAGCACAGGGTGGCCAAGTTGGAGGGTaGCTCTTCCCGCACGGCCCGGATCTCTGCTGCCGGCACCAGTGC +
Preference number: 5 (lower is better)
Translates to: LGSPHLVAQGGQVGG*LFPHGPDLCCRHQC
Trigger: GCACTGGTGCCGGCAGCAGAGATCCGGGCCGTGCGGGAAGAGTCACCCTCCAACTTGGCCACCCTGTGCTACAAGGTGAGGGCTGCCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS GCA 90 bp AGGTTGGCCTGTGGCCTGACACCACCTGGTGGTGAGCGCGGGGAGTaGAAGCTCCGGGCCCCTACCGTTGACCACGATGGTGAGCAGGCA +
Preference number: 5 (lower is better)
Translates to: RLACGLTPPGGERGE*KLRAPTVDHDGEQA
Trigger: TGCCTGCTCACCATCGTGGTCAACGGTAGGGGCCCGGAGCTTGCACTCCCCGCGCTCACCACCAGGTGGTGTCAGGCCACAGGCCAACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318565.11
CDS-3UTR CAA 90 bp GCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGAGCAGCCTCGGCCCGGGCATCGTaGAGGAAGAAGAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: APVWLLQSASSQPPRGAASARAS*RKKRMG
Trigger: CCCCATCCTCTTCTTCCTCAACGATGCCCGGGCCGA...GGCTGCTCCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CAA 90 bp GCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGAGCAGCCTCCACGGGCTGCGTCTaGGTGGTGAGCTGGATCACC +
Preference number: 5 (lower is better)
Translates to: APVWLLQSASSQPPRGAASTGCV*VVSWIT
Trigger: GGTGATCCAGCTCACCACCAAGACGCAGCCCGTGGA...GGCTGCTCCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CAA 90 bp ACAAGGGCTCAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGGAGTTGGCCTGGTACTaGCGGATGAGGATGGGGTGG +
Preference number: 5 (lower is better)
Translates to: TRAQVSAGAAAGPCEWWAELAWY*RMRMGW
Trigger: CCACCCCATCCTCATCCGCAAGTACCAGGCCAACTC...CGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTGAGCCCTTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CAA 90 bp ACAAGGGCTCAGGTGTCCGCCGGCGCCGCTGCAGGGCCTTGTGAATGGTGGGCGCCATGGGCACGCGGATaGAGTAGGGTTTGTTCAGCC +
Preference number: 5 (lower is better)
Translates to: TRAQVSAGAAAGPCEWWAPWARG*SRVCSA
Trigger: GGCTGAACAAACCCTACTCAATCCGCGTGCCCATGG...CGCCCACCATTCACAAGGCCCTGCAGCGGCGCCGGCGGACACCTGAGCCCTTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CAA 90 bp AGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTGGGTCCGTGGGCAGGTaGGCCAGCTGGTGGAAGATG +
Preference number: 5 (lower is better)
Translates to: STPLPCPGTSRDSPWFPGGSVGR*ASWWKM
Trigger: CATCTTCCACCAGCTGGCCAACCTGCCCACGGACCC...ACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS TCA 90 bp CAGCTTCTCAACGGCCTTGTAGCACAGGGTGGCCAAGTTGGAGGGTaGCTCTTCCCGCACGGCCCGGATCTCTGCTGCCGGCACCAGTGC +
Preference number: 5 (lower is better)
Translates to: QLLNGLVAQGGQVGG*LFPHGPDLCCRHQC
Trigger: GCACTGGTGCCGGCAGCAGAGATCCGGGCCGTGCGGGAAGAGTCACCCTCCAACTTGGCCACCCTGTGCTACAAGGCCGTTGAGAAGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000425042.7
ENST00000525128.5
ENST00000530904.5
ENST00000532900.5
ENST00000534480.5
ENST00000579818.1
CDS CCA 90 bp ACCCACTGGCCCCACCCCTGTACTTCCCAAATCCCAGAAGAGGCTTaGAGGAGCATGGCCGGCCCTAAAGGGCGCTCTCCCTGTGACGCC +
Preference number: 5 (lower is better)
Translates to: THWPHPCTSQIPEEA*RSMAGPKGRSPCDA
Trigger: GGCGTCACAGGGAGAGCGCCCTTTAGGGCCGGCCATGCTCCTCCAAGCCTCTTCTGGGATTTGGGAAGTACAGGGGTGGGGCCAGTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525128.5
ENST00000528902.1
CDS TCA 90 bp AGCCCCTCCAGTCGGGGTCCTCAAAGATGTAGGGCAGCACGCGGGTaGGCAGCCGGCTGCAGTTCAGGACGATCTGCTTCTCCTTCTCCG +
Preference number: 5 (lower is better)
Translates to: SPSSRGPQRCRAARG*AAGCSSGRSASPSP
Trigger: CGGAGAAGGAGAAGCAGATCGTCCTGAACTGCAGCCGGCTGCTCACCCGCGTGCTGCCCTACATCTTTGAGGACCCCGACTGGAGGGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000425042.7
ENST00000525128.5
ENST00000528902.1
ENST00000530904.5
ENST00000532900.5
ENST00000534480.5
ENST00000579818.1
ENST00000581676.1
CDS TCA 90 bp GAGTGGACGTCCTCTGCCGAGTCCACAGTGCTCCTCCGGTGGCTCTaGACCGTGAAGTCCGGGCAGAAGAGCAGGTCAGCAATGGCCAGG +
Preference number: 5 (lower is better)
Translates to: EWTSSAESTVLLRWL*TVKSGQKSRSAMAR
Trigger: CCTGGCCATTGCTGACCTGCTCTTCTGCCCGGACTTCACGGTTCAGAGCCACCGGAGGAGCACTGTGGACTCGGCAGAGGACGTCCACTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000425042.7
ENST00000528902.1
ENST00000530857.1
ENST00000532900.5
ENST00000534480.5
CDS TCA 90 bp TCAGCCGCACCCCGAAGTTCCGCTCCCCGCTCAGAAGCAGCAAGATaGAGACACCAATGTGCATCAGGCCCACCCGAGCTGCGGCAGGTG +
Preference number: 5 (lower is better)
Translates to: SAAPRSSAPRSEAAR*RHQCASGPPELRQV
Trigger: CACCTGCCGCAGCTCGGGTGGGCCTGATGCACATTGGTGTCTTCATCTTGCTGCTTCTGAGCGGGGAGCGGAACTTCGGGGTGCGGCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532894.1
ENST00000583244.1
CDS TCA 90 bp CCGTGGGCAGGTTGGCCAGCTGGTGGAAGATGCTGCGCTTGCGGATaGTGGCGTAGACCAGGTTGGAGTTGCCTGTGGGCAGGGAGCATG +
Preference number: 5 (lower is better)
Translates to: PWAGWPAGGRCCACG*WRRPGWSCLWAGSM
Trigger: CATGCTCCCTGCCCACAGGCAACTCCAACCTGGTCTACGCCATCATCCGCAAGCGCAGCATCTTCCACCAGCTGGCCAACCTGCCCACGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000532395.5
CDS GCA 90 bp CGCACGGCCCGGATCTCTGCTGCCGGCACCAGTGCAAACACATCCTaGACCGAGGTGGCTGTGTCTGCCCAGAACTGGTCCCAAAAGGCA +
Preference number: 5 (lower is better)
Translates to: RTARISAAGTSANTS*TEVAVSAQNWSQKA
Trigger: TGCCTTTTGGGACCAGTTCTGGGCAGACACAGCCACCTCGGTGCAGGATGTGTTTGCACTGGTGCCGGCAGCAGAGATCCGGGCCGTGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000425042.7
ENST00000525128.5
ENST00000528902.1
ENST00000530904.5
ENST00000532900.5
ENST00000534480.5
ENST00000579818.1
CDS GCA 90 bp ACGATCTGCTTCTCCTTCTCCGAGTGGCAGCCACTCTCAGCTCCCTaGACCAGCTTCTCAACGGCCTGTGGGGGCAGGCAGGAGCAGAGG +
Preference number: 5 (lower is better)
Translates to: TICFSFSEWQPLSAP*TSFSTACGGRQEQR
Trigger: CCTCTGCTCCTGCCTGCCCCCACAGGCCGTTGAGAAGCTGGTGCAGGGAGCTGAGAGTGGCTGCCACTCGGAGAAGGAGAAGCAGATCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS GCA 90 bp AAGTTCCGCTCCCCGCTCAGAAGCAGCAAGATGAAGACACCAATGTaGATCAGGCCCACCCGAGCTGCGGCAGGTGGCGTGGGAGGGGTC +
Preference number: 5 (lower is better)
Translates to: KFRSPLRSSKMKTPM*IRPTRAAAGGVGGV
Trigger: GACCCCTCCCACGCCACCTGCCGCAGCTCGGGTGGGCCTGATGCACATTGGTGTCTTCATCTTGCTGCTTCTGAGCGGGGAGCGGAACTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532894.1
ENST00000583244.1
CDS CCA 90 bp AGAGTAGCAGGAGGGACTGGGCAGCCCTCACCTTGTAGCACAGGGTaGCCAAGTTGGAGGGTGACTCTTCCCGCACGGCCCGGATCTCTG +
Preference number: 5 (lower is better)
Translates to: RVAGGTGQPSPCSTG*PSWRVTLPARPGSL
Trigger: CAGAGATCCGGGCCGTGCGGGAAGAGTCACCCTCCAACTTGGCCACCCTGTGCTACAAGGTGAGGGCTGCCCAGTCCCTCCTGCTACTCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS CCA 90 bp AGAGGGTGCTGGGGCAGGGCTGGCACTGGCTGTGTGTGCCCACTATaGCTATCCCAGAATGTCAGGCCTGAGCACCTCACAACACCCCCG +
Preference number: 5 (lower is better)
Translates to: RGCWGRAGTGCVCPL*LSQNVRPEHLTTPP
Trigger: CGGGGGTGTTGTGAGGTGCTCAGGCCTGACATTCTGGGATAGCCATAGTGGGCACACACAGCCAGTGCCAGCCCTGCCCCAGCACCCTCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000532395.5
CDS-3UTR CAA 90 bp GGTTCCAGGGACCGCAAGGTGCCATCCTCTGACACCTGGGACTTCTCGGTCAGCCACAGGGTGGCCAAGTaGGAGGGTGACTCTTCCCGC +
Preference number: 5 (lower is better)
Translates to: GSRDRKVPSSDTWDFSVSHRVAK*EGDSSR
Trigger: GCGGGAAGAGTCACCCTCCAACTTGGCCACCCTGTG...GCTGACCGAGAAGTCCCAGGTGTCAGAGGATGGCACCTTGCGGTCCCTGGAACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CAA 90 bp CCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCAAACCGCCACCAGACTGGTCTaGAGGGTGCCTGGCTCTGCA +
Preference number: 5 (lower is better)
Translates to: PLPCPGTSRDSPWFPGQTATRLV*RVPGSA
Trigger: TGCAGAGCCAGGCACCCTCAAGACCAGTCTGGTGGC...GGTTTGACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS CCA 90 bp CCCACCCCTGTACTTCCCAAATCCCAGAAGAGGCTTGGAGGAGCATaGCCGGCCCTAAAGGGCGCTCTCCCTGTGACGCCAACTCTGCCT +
Preference number: 5 (lower is better)
Translates to: PTPVLPKSQKRLGGA*PALKGALPVTPTLP
Trigger: AGGCAGAGTTGGCGTCACAGGGAGAGCGCCCTTTAGGGCCGGCCATGCTCCTCCAAGCCTCTTCTGGGATTTGGGAAGTACAGGGGTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000525128.5
ENST00000528902.1
CDS CCA 90 bp AGCAGCCGGCTGCAGTTCAGGACGATCTGCTTCTCCTTCTCCGAGTaGCAGCCACTCTCAGCTCCCTGCACCAGCTTCTCAACGGCCTGC +
Preference number: 5 (lower is better)
Translates to: SSRLQFRTICFSFSE*QPLSAPCTSFSTAC
Trigger: GCAGGCCGTTGAGAAGCTGGTGCAGGGAGCTGAGAGTGGCTGCCACTCGGAGAAGGAGAAGCAGATCGTCCTGAACTGCAGCCGGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581676.1
CDS-3UTR CAA 90 bp CAGCACCTGCAGCAGCCTCATGATGGTCTGCAGCGGCAGCTTCGACTTCCAGGATCGGCCCGGGCATCGTaGAGGAAGAAGAGGATGGGG +
Preference number: 5 (lower is better)
Translates to: QHLQQPHDGLQRQLRLPGSARAS*RKKRMG
Trigger: CCCCATCCTCTTCTTCCTCAACGATGCCCGGGCCGA...TCCTGGAAGTCGAAGCTGCCGCTGCAGACCATCATGAGGCTGCTGCAGGTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CAA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCACAGGGTGGCCAAGTaGGAGGGTGACTCTTCCCGC +
Preference number: 5 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYHRVAK*EGDSSR
Trigger: GCGGGAAGAGTCACCCTCCAACTTGGCCACCCTGTG...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CAA 90 bp GGGCTGCAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACAATGAGGGGTCCGTGGGCAGGTaGGCCAGCTGGTGGAAGATG +
Preference number: 5 (lower is better)
Translates to: GLQPLVPAGDDLVEHHNEGSVGR*ASWWKM
Trigger: CATCTTCCACCAGCTGGCCAACCTGCCCACGGACCC...CTCATTGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CAA 90 bp CCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCAAACCGAGTTGGCCTGGTACTaGCGGATGAGGATGGGGTGG +
Preference number: 5 (lower is better)
Translates to: PLPCPGTSRDSPWFPGQTELAWY*RMRMGW
Trigger: CCACCCCATCCTCATCCGCAAGTACCAGGCCAACTC...GGTTTGACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CAA 90 bp AACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCAGCCCCAGTCTGGCTTTaGCAGTCGGCCAGCTCCCAG +
Preference number: 5 (lower is better)
Translates to: NSWLWVRRLEAPPYPVQAAPVWL*QSASSQ
Trigger: CTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGC...TGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS GCA 90 bp CCCCTACCGTTGACCACGATGGTGAGCAGGCAGTCGAAGAGGGGCTaGAACCGCTGGTGCCCGCTGGTGATGATCTTGTGGAACACCACA +
Preference number: 5 (lower is better)
Translates to: PLPLTTMVSRQSKRG*NRWCPLVMILWNTT
Trigger: TGTGGTGTTCCACAAGATCATCACCAGCGGGCACCAGCGGTTGCAGCCCCTCTTCGACTGCCTGCTCACCATCGTGGTCAACGGTAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318565.11
CDS GCA 90 bp TGCCGGCACCAGTGCAAACACATCCTGCACCGAGGTGGCTGTGTCTaGCCAGAACTGGTCCCAAAAGGCATCATCGGTGGCTTCCACGGG +
Preference number: 5 (lower is better)
Translates to: CRHQCKHILHRGGCV*PELVPKGIIGGFHG
Trigger: CCCGTGGAAGCCACCGATGATGCCTTTTGGGACCAGTTCTGGGCAGACACAGCCACCTCGGTGCAGGATGTGTTTGCACTGGTGCCGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000425042.7
ENST00000525128.5
ENST00000528902.1
ENST00000530904.5
ENST00000532900.5
ENST00000534480.5
ENST00000579818.1
CDS CCA 90 bp AGCAGCCGGCTGCAGTTCAGGACGATCTGCTTCTCCTTCTCCGAGTaGCAGCCACTCTCAGCTCCCTGCACCAGCTTCTCAACGGCCTTG +
Preference number: 5 (lower is better)
Translates to: SSRLQFRTICFSFSE*QPLSAPCTSFSTAL
Trigger: CAAGGCCGTTGAGAAGCTGGTGCAGGGAGCTGAGAGTGGCTGCCACTCGGAGAAGGAGAAGCAGATCGTCCTGAACTGCAGCCGGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000425042.7
ENST00000525128.5
ENST00000530904.5
ENST00000532900.5
ENST00000534480.5
ENST00000579818.1
CDS CCA 90 bp AGCAGCCGGCTGCAGTTCAGGACGATCTGCTTCTCCTTCTCCGAGTaGCAGCCACTCTCAGCTCCCTGCACCAGCTTCTCAACGGCCTGT +
Preference number: 5 (lower is better)
Translates to: SSRLQFRTICFSFSE*QPLSAPCTSFSTAC
Trigger: ACAGGCCGTTGAGAAGCTGGTGCAGGGAGCTGAGAGTGGCTGCCACTCGGAGAAGGAGAAGCAGATCGTCCTGAACTGCAGCCGGCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS CCA 90 bp AGTGCAAACACATCCTGCACCGAGGTGGCTGTGTCTGCCCAGAACTaGTCCCAAAAGGCATCATCGGTGGCTTCCACGGGCTGCAGCGCC +
Preference number: 5 (lower is better)
Translates to: SANTSCTEVAVSAQN*SQKASSVASTGCSA
Trigger: GGCGCTGCAGCCCGTGGAAGCCACCGATGATGCCTTTTGGGACCAGTTCTGGGCAGACACAGCCACCTCGGTGCAGGATGTGTTTGCACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530904.5
CDS-3UTR CAA 90 bp TTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCCCATGGGCACGCGGATaGAGTAGGGTTTGTTCAGCC +
Preference number: 5 (lower is better)
Translates to: LGGWKHPLTLSRHLKGQPPWARG*SRVCSA
Trigger: GGCTGAACAAACCCTACTCAATCCGCGTGCCCATGG...GGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CAA 90 bp AGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTAGCAGGTGCAGCAACTaGTTGGCAGTCACCATGGAC +
Preference number: 5 (lower is better)
Translates to: STPLPCPGTSRDSPWFPGSRCSN*LAVTMD
Trigger: GTCCATGGTGACTGCCAACAAGTTGCTGCACCTGCT...ACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CAA 90 bp AGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTGACTTCTCGGTCAGCTaGTCAATGCCTGGAGTAGCC +
Preference number: 5 (lower is better)
Translates to: STPLPCPGTSRDSPWFPGDFSVS*SMPGVA
Trigger: GGCTACTCCAGGCATTGACAAGCTGACCGAGAAGTC...ACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CAA 90 bp GGAGCTGGGGGCAGGTACATGGCCTCGGAGAAGCATGTCAGCAGCAGTTTCAGCATGGCAGTGCCCGAGTaGGCCTGGTACTTGCGGATG +
Preference number: 5 (lower is better)
Translates to: GAGGRYMASEKHVSSSFSMAVPE*AWYLRM
Trigger: CATCCGCAAGTACCAGGCCAACTCGGGCACTGCCAT...GCTGAAACTGCTGCTGACATGCTTCTCCGAGGCCATGTACCTGCCCCCAGCTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CAA 90 bp AACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCAGAGGGAGTCCGAGTGTaGGGGGCAGTGGTCTCTGGT +
Preference number: 5 (lower is better)
Translates to: NSWLWVRRLEAPPYPVQAEGVRV*GAVVSG
Trigger: ACCAGAGACCACTGCCCCCAACACTCGGACTCCCTC...TGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS TCA 90 bp ATCCCACCCCCACCCTGGTCTTACACTGATCGGCCCGGGCATCGTTaGGGAAGAAGAGGATGGGGACAAGGATGTCTAGGACGTCGCTGC +
Preference number: 5 (lower is better)
Translates to: IPPPPWSYTDRPGHR*GRRGWGQGCLGRRC
Trigger: GCAGCGACGTCCTAGACATCCTTGTCCCCATCCTCTTCTTCCTCAACGATGCCCGGGCCGATCAGTGTAAGACCAGGGTGGGGGTGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532894.1
ENST00000583244.1
CDS CCA 90 bp GGATCTCTGCTGCCGGCACCAGTGCAAACACATCCTGCACCGAGGTaGCTGTGTCTGCCCAGAACTGGTCCCAAAAGGCATCATCGGTGG +
Preference number: 5 (lower is better)
Translates to: GSLLPAPVQTHPAPR*LCLPRTGPKRHHRW
Trigger: CCACCGATGATGCCTTTTGGGACCAGTTCTGGGCAGACACAGCCACCTCGGTGCAGGATGTGTTTGCACTGGTGCCGGCAGCAGAGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000425042.7
ENST00000525128.5
ENST00000528902.1
ENST00000530904.5
ENST00000532900.5
ENST00000534480.5
ENST00000579818.1
CDS CCA 90 bp CCAGGGGGCAGCACCTCCCCTCAAACGAGACCCAGAGCTGGCGAATaGACTCAGCTCTGGATTGCCTGGAATAAGAGGGAAGAGAGCGCA +
Preference number: 5 (lower is better)
Translates to: PGGSTSPQTRPRAGE*TQLWIAWNKREESA
Trigger: TGCGCTCTCTTCCCTCTTATTCCAGGCAATCCAGAGCTGAGTCCATTCGCCAGCTCTGGGTCTCGTTTGAGGGGAGGTGCTGCCCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS-3UTR CAA 90 bp CCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACTTCCGGAAGTTCAGCTaGGAGTCGGTCGACCCCATG +
Preference number: 5 (lower is better)
Translates to: PGAWNSWLWVRRLEAPPYFRKFS*ESVDPM
Trigger: CATGGGGTCGACCGACTCCAAGCTGAACTTCCGGAA...GTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CAA 90 bp CTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCACTCCACGGGCTGCGTCTaGGTGGTGAGCTGGATCACC +
Preference number: 5 (lower is better)
Translates to: LIRQALVNADLLHLRNQHSTGCV*VVSWIT
Trigger: GGTGATCCAGCTCACCACCAAGACGCAGCCCGTGGA...GTGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CAA 90 bp GGGAGGTGCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGTACTGGATGATGTTGTaGAAGACCTCCAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: GRCPSLAFAVGQLPASSRYWMML*KTSRRK
Trigger: CTTCCTCCTGGAGGTCTTCAACAACATCATCCAGTA...CCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGCACCTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CAA 90 bp TCGTTGAGGAAGAAGAGGATGGGGACAAGGATGTCTAGGACGTCGCTGCTCTTCGGACCCACTCTGGCGTaGGGCTCCACTGCCCACTGG +
Preference number: 5 (lower is better)
Translates to: SLRKKRMGTRMSRTSLLFGPTLA*GSTAHW
Trigger: CCAGTGGGCAGTGGAGCCCAACGCCAGAGTGGGTCC...GAAGAGCAGCGACGTCCTAGACATCCTTGTCCCCATCCTCTTCTTCCTCAACGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS TCA 90 bp GAAAGGCCAAGGGCCCTTCACCTGTTCTCCGTGGAACAAAAGAACTaGACCCATGGGTTGGTGCTGCCACTTTCCGGAGCTGGGGGCAGG +
Preference number: 5 (lower is better)
Translates to: ERPRALHLFSVEQKN*THGLVLPLSGAGGR
Trigger: CCTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTTTGTTCCACGGAGAACAGGTGAAGGGCCCTTGGCCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS CCA 90 bp TACACAAGCTTGCGTTCTTTCTGTGGGCTGGAGGGGCTTGAAACCTaGAGCAAGTGGCAGGTTGGCCTGTGGCCTGACACCACCTGGTGG +
Preference number: 5 (lower is better)
Translates to: YTSLRSFCGLEGLET*SKWQVGLWPDTTWW
Trigger: CCACCAGGTGGTGTCAGGCCACAGGCCAACCTGCCACTTGCTCCAGGTTTCAAGCCCCTCCAGCCCACAGAAAGAACGCAAGCTTGTGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318565.11
CDS CCA 90 bp AGTGCAAACACATCCTGCACCGAGGTGGCTGTGTCTGCCCAGAACTaGTCCCAAAAGGCATCATCGGTGGCTTCCACGGGCTGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: SANTSCTEVAVSAQN*SQKASSVASTGCVL
Trigger: CAAGACGCAGCCCGTGGAAGCCACCGATGATGCCTTTTGGGACCAGTTCTGGGCAGACACAGCCACCTCGGTGCAGGATGTGTTTGCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000425042.7
ENST00000525128.5
ENST00000528902.1
ENST00000534480.5
CDS CCA 90 bp CCCTTCACCTGTTCTCCGTGGAACAAAAGAACTGAACCCATGGGTTaGTGCTGCCACTTTCCGGAGCTGGGGGCAGGTACATGGCCTCGG +
Preference number: 5 (lower is better)
Translates to: PFTCSPWNKRTEPMG*CCHFPELGAGTWPR
Trigger: CCGAGGCCATGTACCTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTTTGTTCCACGGAGAACAGGTGAAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS CCA 90 bp AGGTGGCTGTGTCTGCCCAGAACTGGTCCCAAAAGGCATCATCGGTaGCTTCCACGGGCATGGCACTTCAGCCTCGGTGACAGAGTGGTT +
Preference number: 5 (lower is better)
Translates to: RWLCLPRTGPKRHHR*LPRAWHFSLGDRVV
Trigger: AACCACTCTGTCACCGAGGCTGAAGTGCCATGCCCGTGGAAGCCACCGATGATGCCTTTTGGGACCAGTTCTGGGCAGACACAGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579818.1
CDS-3UTR CAA 90 bp GCCCCAGTCTGGCTTTTGCAGTCGGCCAGCTCCCAGCCTCCTCGAGGAGCAGCCAAGAGGAATTTCTTGTaGAAGTCGCAGAGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: APVWLLQSASSQPPRGAAKRNFL*KSQSFQ
Trigger: CTGGAAGCTCTGCGACTTCAACAAGAAATTCCTCTT...GGCTGCTCCTCGAGGAGGCTGGGAGCTGGCCGACTGCAAAAGCCAGACTGGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CAA 90 bp CCCTTACCCTGTCCAGGCACCTCAAGGGACAGCCCGTGGTTCCCTGGTCAAACCCCGCTGGTGATGATCTaGTGGAACACCACAATGAGC +
Preference number: 5 (lower is better)
Translates to: PLPCPGTSRDSPWFPGQTPLVMI*WNTTMS
Trigger: GCTCATTGTGGTGTTCCACAAGATCATCACCAGCGG...GGTTTGACCAGGGAACCACGGGCTGTCCCTTGAGGTGCCTGGACAGGGTAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CAA 90 bp TGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCACCTCAAGGGACAAGGTGCAGCAACTTGTaGGCAGTCACCATGGACAGG +
Preference number: 5 (lower is better)
Translates to: WVRRLEAPPYPVQAPQGTRCSNL*AVTMDR
Trigger: CCTGTCCATGGTGACTGCCAACAAGTTGCTGCACCT...TGTCCCTTGAGGTGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS GCA 90 bp TGCTCAGTCAGATGTGGCCTGGAGGACTCCCCCATAAATGACGGCTaGCGTGGTCCCAACGCCCAGCAAAGAGAACCACAGAGAAGTGGA +
Preference number: 5 (lower is better)
Translates to: CSVRCGLEDSPINDG*RGPNAQQREPQRSG
Trigger: TCCACTTCTCTGTGGTTCTCTTTGCTGGGCGTTGGGACCACGGCAGCCGTCATTTATGGGGGAGTCCTCCAGGCCACATCTGACTGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS GCA 90 bp ACCTGTTCTCCGTGGAACAAAAGAACTGAACCCATGGGTTGGTGCTaGCACTTTCCGGAGCTGGGGGCAGGTACATGGCCTCGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: TCSPWNKRTEPMGWC*HFPELGAGTWPRRS
Trigger: GCTTCTCCGAGGCCATGTACCTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTTTGTTCCACGGAGAACAGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS CCA 90 bp AAGGGCCCTTCACCTGTTCTCCGTGGAACAAAAGAACTGAACCCATaGGTTGGTGCTGCCACTTTCCGGAGCTGGGGGCAGGTACATGGC +
Preference number: 5 (lower is better)
Translates to: KGPSPVLRGTKELNP*VGAATFRSWGQVHG
Trigger: GCCATGTACCTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTTTGTTCCACGGAGAACAGGTGAAGGGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS CCA 90 bp AGTGCAAACACATCCTGCACCGAGGTGGCTGTGTCTGCCCAGAACTaGTCCCAAAAGGCATCATCGGTGGCTTCCACGGGCCTTCATCTC +
Preference number: 5 (lower is better)
Translates to: SANTSCTEVAVSAQN*SQKASSVASTGLHL
Trigger: GAGATGAAGGCCCGTGGAAGCCACCGATGATGCCTTTTGGGACCAGTTCTGGGCAGACACAGCCACCTCGGTGCAGGATGTGTTTGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532900.5
CDS CCA 90 bp AGTGCAAACACATCCTGCACCGAGGTGGCTGTGTCTGCCCAGAACTaGTCCCAAAAGGCATCATCGGTGGCTTCCACGGGCATGGCACTT +
Preference number: 5 (lower is better)
Translates to: SANTSCTEVAVSAQN*SQKASSVASTGMAL
Trigger: AAGTGCCATGCCCGTGGAAGCCACCGATGATGCCTTTTGGGACCAGTTCTGGGCAGACACAGCCACCTCGGTGCAGGATGTGTTTGCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579818.1
CDS-3UTR CAA 90 bp CCACACCTTTTTCCCCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGAGCCGGGCTATACCCTaGAGGATGAACTGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: PHLFPLEPGTAGFGLGGWSRAIP*RMNWKS
Trigger: GGACTTCCAGTTCATCCTCAAGGGTATAGCCCGGCT...CCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGGGGAAAAAGGTGTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CAA 90 bp TCCCTTCCCTGCCCCTCATTACTGGGTAAGAGGGAGCCAGGCTATTTCCATGGAATGGCAGTGCCCGAGTaGGCCTGGTACTTGCGGATG +
Preference number: 5 (lower is better)
Translates to: SLPCPSLLGKREPGYFHGMAVPE*AWYLRM
Trigger: CATCCGCAAGTACCAGGCCAACTCGGGCACTGCCAT...TCCATGGAAATAGCCTGGCTCCCTCTTACCCAGTAATGAGGGGCAGGGAAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS GCA 90 bp TTCACCTGTTCTCCGTGGAACAAAAGAACTGAACCCATGGGTTGGTaGTGCCACTTTCCGGAGCTGGGGGCAGGTACATGGCCTCGGAGA +
Preference number: 5 (lower is better)
Translates to: FTCSPWNKRTEPMGW*CHFPELGAGTWPRR
Trigger: TCTCCGAGGCCATGTACCTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTTTGTTCCACGGAGAACAGGTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS CCA 90 bp GTGGCTACTATGAAGGGTACACAAGCTTGCGTTCTTTCTGTGGGCTaGAGGGGCTTGAAACCTGGAGCAAGTGGCAGGTTGGCCTGTGGC +
Preference number: 5 (lower is better)
Translates to: VATMKGTQACVLSVG*RGLKPGASGRLACG
Trigger: GCCACAGGCCAACCTGCCACTTGCTCCAGGTTTCAAGCCCCTCCAGCCCACAGAAAGAACGCAAGCTTGTGTACCCTTCATAGTAGCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318565.11
CDS CCA 90 bp CAAACGAGACCCAGAGCTGGCGAATGGACTCAGCTCTGGATTGCCTaGAATAAGAGGGAAGAGAGCGCAGAAAGGCCAAGGGCCCTTCAC +
Preference number: 5 (lower is better)
Translates to: QTRPRAGEWTQLWIA*NKREESAERPRALH
Trigger: GTGAAGGGCCCTTGGCCTTTCTGCGCTCTCTTCCCTCTTATTCCAGGCAATCCAGAGCTGAGTCCATTCGCCAGCTCTGGGTCTCGTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS-3UTR CAA 90 bp GTGGAAGATGCTGCGCTTGCGGATGATGGCGTAGACCAGGTTGGAGTTGCCATCAGCCGGGCTATACCCTaGAGGATGAACTGGAAGTCC +
Preference number: 5 (lower is better)
Translates to: VEDAALADDGVDQVGVAISRAIP*RMNWKS
Trigger: GGACTTCCAGTTCATCCTCAAGGGTATAGCCCGGCT...GATGGCAACTCCAACCTGGTCTACGCCATCATCCGCAAGCGCAGCATCTTCCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CAA 90 bp CTCATCCGTCAGGCCCTTGTCAATGCAGATCTTCTCCACCTGCGGAACCAGCACAGGTGCAGCAACTTGTaGGCAGTCACCATGGACAGG +
Preference number: 5 (lower is better)
Translates to: LIRQALVNADLLHLRNQHRCSNL*AVTMDR
Trigger: CCTGTCCATGGTGACTGCCAACAAGTTGCTGCACCT...GTGCTGGTTCCGCAGGTGGAGAAGATCTGCATTGACAAGGGCCTGACGGATGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CAA 90 bp AGAGAAGAGCAGGTGGTTGTAGGGGATCCCGTAGCCCACAGGGTCATAGGCACAAGCAGGTGCAGCAACTaGTTGGCAGTCACCATGGAC +
Preference number: 5 (lower is better)
Translates to: REEQVVVGDPVAHRVIGTSRCSN*LAVTMD
Trigger: GTCCATGGTGACTGCCAACAAGTTGCTGCACCTGCT...TGTGCCTATGACCCTGTGGGCTACGGGATCCCCTACAACCACCTGCTCTTCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CAA 90 bp CCACACCTTTTTCCCCTGGAGCCTGGAACAGCTGGCTTTGGGTTAGGAGGCTGGTCATCCGTCAGGCCCTaGTCAATGCAGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: PHLFPLEPGTAGFGLGGWSSVRP*SMQIFS
Trigger: GGAGAAGATCTGCATTGACAAGGGCCTGACGGATGA...CCAGCCTCCTAACCCAAAGCCAGCTGTTCCAGGCTCCAGGGGAAAAAGGTGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CAA 90 bp GAGCAGGGGGTTGGACAGCAGCCGGGCTATACCCTTGAGGATGAACTGGAAGTCTCATCCGTCAGGCCCTaGTCAATGCAGATCTTCTCC +
Preference number: 5 (lower is better)
Translates to: EQGVGQQPGYTLEDELEVSSVRP*SMQIFS
Trigger: GGAGAAGATCTGCATTGACAAGGGCCTGACGGATGA...GACTTCCAGTTCATCCTCAAGGGTATAGCCCGGCTGCTGTCCAACCCCCTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS TCA 90 bp CAGATTCTGTCCTGTCGAGGACTCCAAGGAGAGACGGGGCTAGTGTaGGGTGTGGCTGGTAAGTTAAAGTTCATCACCACCAGGGGGCAG +
Preference number: 5 (lower is better)
Translates to: QILSCRGLQGETGLV*GVAGKLKFITTRGQ
Trigger: CTGCCCCCTGGTGGTGATGAACTTTAACTTACCAGCCACACCTCACACTAGCCCCGTCTCTCCTTGGAGTCCTCGACAGGACAGAATCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS-3UTR CAA 90 bp CAGCACCTGCAGCAGCCTCATGATGGTCTGCAGCGGCAGCTTCGACTTCCAGGATACTGGATGATGTTGTaGAAGACCTCCAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: QHLQQPHDGLQRQLRLPGYWMML*KTSRRK
Trigger: CTTCCTCCTGGAGGTCTTCAACAACATCATCCAGTA...TCCTGGAAGTCGAAGCTGCCGCTGCAGACCATCATGAGGCTGCTGCAGGTGCTG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CAA 90 bp GAGCAGGGGGTTGGACAGCAGCCGGGCTATACCCTTGAGGATGAACTGGAAGTCAAGAGGAATTTCTTGTaGAAGTCGCAGAGCTTCCAG +
Preference number: 5 (lower is better)
Translates to: EQGVGQQPGYTLEDELEVKRNFL*KSQSFQ
Trigger: CTGGAAGCTCTGCGACTTCAACAAGAAATTCCTCTT...GACTTCCAGTTCATCCTCAAGGGTATAGCCCGGCTGCTGTCCAACCCCCTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CAA 90 bp AACAGCTGGCTTTGGGTTAGGAGGCTGGAAGCACCCCCTTACCCTGTCCAGGCAAAGAAGAGGAATTTCTaGTTGAAGTCGCAGAGCTTC +
Preference number: 5 (lower is better)
Translates to: NSWLWVRRLEAPPYPVQAKKRNF*LKSQSF
Trigger: GAAGCTCTGCGACTTCAACAAGAAATTCCTCTTCTT...TGCCTGGACAGGGTAAGGGGGTGCTTCCAGCCTCCTAACCCAAAGCCAGCTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000425042.7
CDS-3UTR CAA 90 bp AGAGCTTCCAGAAGAGAACTAGCAGCTCCTGGTGGAACTGGATCTTCTTGGTGGCCGCTGGTGATGATCTaGTGGAACACCACAATGAGC +
Preference number: 5 (lower is better)
Translates to: RASRRELAAPGGTGSSWWPLVMI*WNTTMS
Trigger: GCTCATTGTGGTGTTCCACAAGATCATCACCAGCGG...CCACCAAGAAGATCCAGTTCCACCAGGAGCTGCTAGTTCTCTTCTGGAAGCTCT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CAA 90 bp AGCACGAAGAAGAGGAATTTCTTGTTGAAGTCGCAGAGCTTCCAGAAGAGAACTTTCCGGAAGTTCAGCTaGGAGTCGGTCGACCCCATG +
Preference number: 5 (lower is better)
Translates to: STKKRNFLLKSQSFQKRTFRKFS*ESVDPM
Trigger: CATGGGGTCGACCGACTCCAAGCTGAACTTCCGGAA...AGTTCTCTTCTGGAAGCTCTGCGACTTCAACAAGAAATTCCTCTTCTTCGTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS-3UTR CAA 90 bp AGCACGAAGAAGAGGAATTTCTTGTTGAAGTCGCAGAGCTTCCAGAAGAGAACTGACTTCTCGGTCAGCTaGTCAATGCCTGGAGTAGCC +
Preference number: 5 (lower is better)
Translates to: STKKRNFLLKSQSFQKRTDFSVS*SMPGVA
Trigger: GGCTACTCCAGGCATTGACAAGCTGACCGAGAAGTC...AGTTCTCTTCTGGAAGCTCTGCGACTTCAACAAGAAATTCCTCTTCTTCGTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000534480.5
CDS CAA 90 bp TGGGGTCGGCCAGCCTTGGGGGACTGGGACACAGGCCAGAGCAGCTaGGAGCATCAGGACAGCCAGGGCCCAGCTAGCCACTGGATGGCT +
Preference number: 6 (lower is better)
Translates to: WGRPALGDWDTGQSS*EHQDSQGPASHWMA
Trigger: AGCCATCCAGTGGCTAGCTGGGCCCTGGCTGTCCTGATGCTCCAAGCTGCTCTGGCCTGTGTCCCAGTCCCCCAAGGCTGGCCGACCCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS GCA 72 bp TGTGGCCTGACACCACCTGGTGGTGAGCGCGGGGAGTaGAAGCTCCGGGCCCCTACCGTTGACCACGATGGT +
Preference number: 6 (lower is better)
Translates to: CGLTPPGGERGE*KLRAPTVDHDG
Trigger: ACCATCGTGGTCAACGGTAGGGGCCCGGAGCTTGCACTCCCCGCGCTCACCACCAGGTGGTGTCAGGCCACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000318565.11
CDS CCA 72 bp GGAGGGACTGGGCAGCCCTCACCTTGTAGCACAGGGTaGCCAAGTTGGAGGGTGACTCTTCCCGCACGGCCC +
Preference number: 6 (lower is better)
Translates to: GGTGQPSPCSTG*PSWRVTLPARP
Trigger: GGGCCGTGCGGGAAGAGTCACCCTCCAACTTGGCCACCCTGTGCTACAAGGTGAGGGCTGCCCAGTCCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS CAA 90 bp TGCGTCTTGGTGGTGAGCTGGATCACCGCCTTCCGGAAGTTCAGCTaGGAGTCGGTCGACCCCATGTCTCTGGAGCCCGCTCCGGCCCGG +
Preference number: 6 (lower is better)
Translates to: CVLVVSWITAFRKFS*ESVDPMSLEPAPAR
Trigger: CCGGGCCGGAGCGGGCTCCAGAGACATGGGGTCGACCGACTCCAAGCTGAACTTCCGGAAGGCGGTGATCCAGCTCACCACCAAGACGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000425042.7
ENST00000525128.5
ENST00000528902.1
ENST00000530857.1
ENST00000534480.5
ENST00000579818.1
ENST00000581676.1
CDS TCA 72 bp AACGGCCTTGTAGCACAGGGTGGCCAAGTTGGAGGGTaGCTCTTCCCGCACGGCCCGGATCTCTGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: NGLVAQGGQVGG*LFPHGPDLCCR
Trigger: CCGGCAGCAGAGATCCGGGCCGTGCGGGAAGAGTCACCCTCCAACTTGGCCACCCTGTGCTACAAGGCCGTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000425042.7
ENST00000525128.5
ENST00000530904.5
ENST00000532900.5
ENST00000534480.5
ENST00000579818.1
CDS TCA 72 bp CCTCACCTTGTAGCACAGGGTGGCCAAGTTGGAGGGTaGCTCTTCCCGCACGGCCCGGATCTCTGCTGCCGG +
Preference number: 6 (lower is better)
Translates to: PHLVAQGGQVGG*LFPHGPDLCCR
Trigger: CCGGCAGCAGAGATCCGGGCCGTGCGGGAAGAGTCACCCTCCAACTTGGCCACCCTGTGCTACAAGGTGAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS CCA 72 bp GGGCAGCCCTCACCTTGTAGCACAGGGTGGCCAAGTTaGAGGGTGACTCTTCCCGCACGGCCCGGATCTCTG +
Preference number: 6 (lower is better)
Translates to: GQPSPCSTGWPS*RVTLPARPGSL
Trigger: CAGAGATCCGGGCCGTGCGGGAAGAGTCACCCTCCAACTTGGCCACCCTGTGCTACAAGGTGAGGGCTGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS CCA 72 bp GGAGGACAGGAGGGTGTCTGCCCAAGGGGTTGGAGATaGTACAGGGAGCCCAAGAGAGGGTGCTGGGGCAGG +
Preference number: 6 (lower is better)
Translates to: GGQEGVCPRGWR*YREPKRGCWGR
Trigger: CCTGCCCCAGCACCCTCTCTTGGGCTCCCTGTACCATCTCCAACCCCTTGGGCAGACACCCTCCTGTCCTCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532395.5
CDS CCA 72 bp TGTCTGCCCAGAACTGGTCCCAAAAGGCATCATCGGTaGCTTCCACGGGCTGCAGCGCCCGCCGCCGAAGAC +
Preference number: 6 (lower is better)
Translates to: CLPRTGPKRHHR*LPRAAAPAAED
Trigger: GTCTTCGGCGGCGGGCGCTGCAGCCCGTGGAAGCCACCGATGATGCCTTTTGGGACCAGTTCTGGGCAGACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530904.5
CDS CCA 72 bp CCTGCACCAGCTTCTCAACGGCCTTGTAGCACAGGGTaGCCAAGTTGGAGGGTGACTCTTCCCGCACGGCCC +
Preference number: 6 (lower is better)
Translates to: PAPASQRPCSTG*PSWRVTLPARP
Trigger: GGGCCGTGCGGGAAGAGTCACCCTCCAACTTGGCCACCCTGTGCTACAAGGCCGTTGAGAAGCTGGTGCAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000425042.7
ENST00000525128.5
ENST00000530904.5
ENST00000532900.5
ENST00000534480.5
ENST00000579818.1
CDS CCA 72 bp CCCCACCCCTGTACTTCCCAAATCCCAGAAGAGGCTTaGAGGAGCATGGCCGGCCCTAAAGGGCGCTCTCCC +
Preference number: 6 (lower is better)
Translates to: PHPCTSQIPEEA*RSMAGPKGRSP
Trigger: GGGAGAGCGCCCTTTAGGGCCGGCCATGCTCCTCCAAGCCTCTTCTGGGATTTGGGAAGTACAGGGGTGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000525128.5
ENST00000528902.1
CDS CCA 72 bp GTACAGGGAGCCCAAGAGAGGGTGCTGGGGCAGGGCTaGCACTGGCTGTGTGTGCCCACTATGGCTATCCCA +
Preference number: 6 (lower is better)
Translates to: VQGAQERVLGQG*HWLCVPTMAIP
Trigger: TGGGATAGCCATAGTGGGCACACACAGCCAGTGCCAGCCCTGCCCCAGCACCCTCTCTTGGGCTCCCTGTAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532395.5
CDS CAA 90 bp GCACCCATGGGCAGAGGAATGAAGGGACAGGAAGTGGACTCCTGGTaGCCCCAAACCTCCCAAGGCAGAAGTGGGGCACAGCAGGGAGCC +
Preference number: 6 (lower is better)
Translates to: APMGRGMKGQEVDSW*PQTSQGRSGAQQGA
Trigger: GGCTCCCTGCTGTGCCCCACTTCTGCCTTGGGAGGTTTGGGGCAACCAGGAGTCCACTTCCTGTCCCTTCATTCCTCTGCCCATGGGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS TCA 72 bp CCGAGTCCACAGTGCTCCTCCGGTGGCTCTGAACCGTaGAGTCCGGGCAGAAGAGCAGGTCAGCAATGGCCA +
Preference number: 6 (lower is better)
Translates to: PSPQCSSGGSEP*SPGRRAGQQWP
Trigger: TGGCCATTGCTGACCTGCTCTTCTGCCCGGACTTCACGGTTCAGAGCCACCGGAGGAGCACTGTGGACTCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000425042.7
ENST00000528902.1
ENST00000530857.1
ENST00000532900.5
ENST00000534480.5
CDS TCA 72 bp AGGCGGCTCTTGATGGAGGACCCAGGGACGGATTACTaGGGGGCCCCCAGATTCTGTCCTGTCGAGGACTCC +
Preference number: 6 (lower is better)
Translates to: RRLLMEDPGTDY*GAPRFCPVEDS
Trigger: GGAGTCCTCGACAGGACAGAATCTGGGGGCCCCTCAGTAATCCGTCCCTGGGTCCTCCATCAAGAGCCGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS GCA 72 bp CGGATCTCTGCTGCCGGCACCAGTGCAAACACATCCTaGACCGAGGTGGCTGTGTCTGCCCAGAACTGGTCC +
Preference number: 6 (lower is better)
Translates to: RISAAGTSANTS*TEVAVSAQNWS
Trigger: GGACCAGTTCTGGGCAGACACAGCCACCTCGGTGCAGGATGTGTTTGCACTGGTGCCGGCAGCAGAGATCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000425042.7
ENST00000525128.5
ENST00000528902.1
ENST00000530904.5
ENST00000532900.5
ENST00000534480.5
ENST00000579818.1
CDS CCA 72 bp GCTTCTCAACGGCCTTGTAGCACAGGGTGGCCAAGTTaGAGGGTGACTCTTCCCGCACGGCCCGGATCTCTG +
Preference number: 6 (lower is better)
Translates to: ASQRPCSTGWPS*RVTLPARPGSL
Trigger: CAGAGATCCGGGCCGTGCGGGAAGAGTCACCCTCCAACTTGGCCACCCTGTGCTACAAGGCCGTTGAGAAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000425042.7
ENST00000525128.5
ENST00000530904.5
ENST00000532900.5
ENST00000534480.5
ENST00000579818.1
CDS CAA 72 bp GTGGTGAGCTGGATCACCGCCTTCCGGAAGTTCAGCTaGGAGTCGGTCGACCCCATGTCTCTGGAGCCCGCT +
Preference number: 6 (lower is better)
Translates to: VVSWITAFRKFS*ESVDPMSLEPA
Trigger: AGCGGGCTCCAGAGACATGGGGTCGACCGACTCCAAGCTGAACTTCCGGAAGGCGGTGATCCAGCTCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000425042.7
ENST00000525128.5
ENST00000528902.1
ENST00000530857.1
ENST00000534480.5
ENST00000579818.1
ENST00000581676.1
CDS TCA 72 bp AGTCGGGGTCCTCAAAGATGTAGGGCAGCACGCGGGTaGGCAGCCGGCTGCAGTTCAGGACGATCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: SRGPQRCRAARG*AAGCSSGRSAS
Trigger: AGAAGCAGATCGTCCTGAACTGCAGCCGGCTGCTCACCCGCGTGCTGCCCTACATCTTTGAGGACCCCGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000425042.7
ENST00000525128.5
ENST00000528902.1
ENST00000530904.5
ENST00000532900.5
ENST00000534480.5
ENST00000579818.1
ENST00000581676.1
CDS TCA 72 bp CCCCGAAGTTCCGCTCCCCGCTCAGAAGCAGCAAGATaGAGACACCAATGTGCATCAGGCCCACCCGAGCTG +
Preference number: 6 (lower is better)
Translates to: PRSSAPRSEAAR*RHQCASGPPEL
Trigger: CAGCTCGGGTGGGCCTGATGCACATTGGTGTCTTCATCTTGCTGCTTCTGAGCGGGGAGCGGAACTTCGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532894.1
ENST00000583244.1
CDS CCA 72 bp ACATCCTGCACCGAGGTGGCTGTGTCTGCCCAGAACTaGTCCCAAAAGGCATCATCGGTGGCTTCCACGGGC +
Preference number: 6 (lower is better)
Translates to: TSCTEVAVSAQN*SQKASSVASTG
Trigger: GCCCGTGGAAGCCACCGATGATGCCTTTTGGGACCAGTTCTGGGCAGACACAGCCACCTCGGTGCAGGATGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000425042.7
ENST00000525128.5
ENST00000528902.1
ENST00000530904.5
ENST00000532900.5
ENST00000534480.5
ENST00000579818.1
CDS CCA 72 bp GTACTTCCCAAATCCCAGAAGAGGCTTGGAGGAGCATaGCCGGCCCTAAAGGGCGCTCTCCCTGTGACGCCA +
Preference number: 6 (lower is better)
Translates to: VLPKSQKRLGGA*PALKGALPVTP
Trigger: TGGCGTCACAGGGAGAGCGCCCTTTAGGGCCGGCCATGCTCCTCCAAGCCTCTTCTGGGATTTGGGAAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000525128.5
ENST00000528902.1
CDS CCA 72 bp TGGGGCAGGGCTGGCACTGGCTGTGTGTGCCCACTATaGCTATCCCAGAATGTCAGGCCTGAGCACCTCACA +
Preference number: 6 (lower is better)
Translates to: WGRAGTGCVCPL*LSQNVRPEHLT
Trigger: TGTGAGGTGCTCAGGCCTGACATTCTGGGATAGCCATAGTGGGCACACACAGCCAGTGCCAGCCCTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532395.5
CDS CCA 72 bp GAGTTTGGAGGACAGGAGGGTGTCTGCCCAAGGGGTTaGAGATGGTACAGGGAGCCCAAGAGAGGGTGCTGG +
Preference number: 6 (lower is better)
Translates to: EFGGQEGVCPRG*RWYREPKRGCW
Trigger: CCAGCACCCTCTCTTGGGCTCCCTGTACCATCTCCAACCCCTTGGGCAGACACCCTCCTGTCCTCCAAACTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532395.5
CDS CCA 72 bp TGTCTGCCCAGAACTGGTCCCAAAAGGCATCATCGGTaGCTTCCACGGGCCTTCATCTCCGCTCCGGCTCCT +
Preference number: 6 (lower is better)
Translates to: CLPRTGPKRHHR*LPRAFISAPAP
Trigger: AGGAGCCGGAGCGGAGATGAAGGCCCGTGGAAGCCACCGATGATGCCTTTTGGGACCAGTTCTGGGCAGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532900.5
CDS CAA 72 bp GGAGTTTGGAGGACAGGAGGGTGTCTGCCCAAGGGGTaGGAGATGGTACAGGGAGCCCAAGAGAGGGTGCTG +
Preference number: 6 (lower is better)
Translates to: GVWRTGGCLPKG*EMVQGAQERVL
Trigger: CAGCACCCTCTCTTGGGCTCCCTGTACCATCTCCAACCCCTTGGGCAGACACCCTCCTGTCCTCCAAACTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532395.5
CDS TCA 72 bp CTCAGTCAGATGTGGCCTGGAGGACTCCCCCATAAATaGCGGCTGCCGTGGTCCCAACGCCCAGCAAAGAGA +
Preference number: 6 (lower is better)
Translates to: LSQMWPGGLPHK*RLPWSQRPAKR
Trigger: TCTCTTTGCTGGGCGTTGGGACCACGGCAGCCGTCATTTATGGGGGAGTCCTCCAGGCCACATCTGACTGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS GCA 72 bp AGATGTGGCCTGGAGGACTCCCCCATAAATGACGGCTaGCGTGGTCCCAACGCCCAGCAAAGAGAACCACAG +
Preference number: 6 (lower is better)
Translates to: RCGLEDSPINDG*RGPNAQQREPQ
Trigger: CTGTGGTTCTCTTTGCTGGGCGTTGGGACCACGGCAGCCGTCATTTATGGGGGAGTCCTCCAGGCCACATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS CCA 72 bp GGTCCCAAAAGGCATCATCGGTGGCTTCCACGGGCATaGCACTTCAGCCTCGGTGACAGAGTGGTTCACACC +
Preference number: 6 (lower is better)
Translates to: GPKRHHRWLPRA*HFSLGDRVVHT
Trigger: GGTGTGAACCACTCTGTCACCGAGGCTGAAGTGCCATGCCCGTGGAAGCCACCGATGATGCCTTTTGGGACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579818.1
CDS CCA 72 bp TGTCTGCCCAGAACTGGTCCCAAAAGGCATCATCGGTaGCTTCCACGGGCATGGCACTTCAGCCTCGGTGAC +
Preference number: 6 (lower is better)
Translates to: CLPRTGPKRHHR*LPRAWHFSLGD
Trigger: GTCACCGAGGCTGAAGTGCCATGCCCGTGGAAGCCACCGATGATGCCTTTTGGGACCAGTTCTGGGCAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579818.1
CDS CCA 72 bp ACCAGCTTCTCAACGGCCTGCGTCTTGGTGGTGAGCTaGATCACCGCCTTCCGGAAGTTCAGCTTGGAGTCG +
Preference number: 6 (lower is better)
Translates to: TSFSTACVLVVS*ITAFRKFSLES
Trigger: CGACTCCAAGCTGAACTTCCGGAAGGCGGTGATCCAGCTCACCACCAAGACGCAGGCCGTTGAGAAGCTGGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581676.1
CDS GCA 72 bp CAGTGCAAACACATCCTGCACCGAGGTGGCTGTGTCTaGCCAGAACTGGTCCCAAAAGGCATCATCGGTGGC +
Preference number: 6 (lower is better)
Translates to: QCKHILHRGGCV*PELVPKGIIGG
Trigger: GCCACCGATGATGCCTTTTGGGACCAGTTCTGGGCAGACACAGCCACCTCGGTGCAGGATGTGTTTGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000425042.7
ENST00000525128.5
ENST00000528902.1
ENST00000530904.5
ENST00000532900.5
ENST00000534480.5
ENST00000579818.1
CDS CCA 72 bp CTGCAGTTCAGGACGATCTGCTTCTCCTTCTCCGAGTaGCAGCCACTCTCAGCTCCCTGCACCAGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: LQFRTICFSFSE*QPLSAPCTSFS
Trigger: TGAGAAGCTGGTGCAGGGAGCTGAGAGTGGCTGCCACTCGGAGAAGGAGAAGCAGATCGTCCTGAACTGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000425042.7
ENST00000525128.5
ENST00000528902.1
ENST00000530904.5
ENST00000532900.5
ENST00000534480.5
ENST00000579818.1
ENST00000581676.1
CDS CCA 72 bp TATTCTGACTCTCTTCCCACCTCCCCTCGAGCAAGGTaGCCAGGAGAAGTCACAGAGGATCCGTCCATCCCC +
Preference number: 6 (lower is better)
Translates to: YSDSLPTSPRAR*PGEVTEDPSIP
Trigger: GGGGATGGACGGATCCTCTGTGACTTCTCCTGGCCACCTTGCTCGAGGGGAGGTGGGAAGAGAGTCAGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532395.5
CDS CAA 72 bp ACACAAGCTTGCGTTCTTTCTGTGGGCTGGAGGGGCTaGAAACCTGGAGCAAGTGGCAGGTTGGCCTGTGGC +
Preference number: 6 (lower is better)
Translates to: TQACVLSVGWRG*KPGASGRLACG
Trigger: GCCACAGGCCAACCTGCCACTTGCTCCAGGTTTCAAGCCCCTCCAGCCCACAGAAAGAACGCAAGCTTGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318565.11
CDS CAA 90 bp ATGAAGGGTACACAAGCTTGCGTTCTTTCTGTGGGCTGGAGGGGCTaGAAACCTGGAGCAAGTGGCAGGTTGGCCTGTGGCCTGACACCA +
Preference number: 6 (lower is better)
Translates to: MKGTQACVLSVGWRG*KPGASGRLACGLTP
Trigger: TGGTGTCAGGCCACAGGCCAACCTGCCACTTGCTCCAGGTTTCAAGCCCCTCCAGCCCACAGAAAGAACGCAAGCTTGTGTACCCTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000318565.11
CDS CCA 72 bp TCACCTGTTCTCCGTGGAACAAAAGAACTGAACCCATaGGTTGGTGCTGCCACTTTCCGGAGCTGGGGGCAG +
Preference number: 6 (lower is better)
Translates to: SPVLRGTKELNP*VGAATFRSWGQ
Trigger: CTGCCCCCAGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTTTGTTCCACGGAGAACAGGTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS CCA 72 bp TCATCATCCTCTTCTCCCTGCGTCTTGGTGGTGAGCTaGATCACCGCCTTCCGGAAGTTCAGCTTGGAGTCG +
Preference number: 6 (lower is better)
Translates to: SSSSSPCVLVVS*ITAFRKFSLES
Trigger: CGACTCCAAGCTGAACTTCCGGAAGGCGGTGATCCAGCTCACCACCAAGACGCAGGGAGAAGAGGATGATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000530857.1
CDS CAA 90 bp GTGACCCCAACATCAAGAGTCTCAGCCCTGCTAGGAATCACTGTGTaGCATCCCTCAGCACCTCACCTGGACATAAACCCAGGGCAGGTG +
Preference number: 6 (lower is better)
Translates to: VTPTSRVSALLGITV*HPSAPHLDINPGQV
Trigger: CACCTGCCCTGGGTTTATGTCCAGGTGAGGTGCTGAGGGATGCAACACAGTGATTCCTAGCAGGGCTGAGACTCTTGATGTTGGGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS TCA 72 bp AGGGCCCTTCACCTGTTCTCCGTGGAACAAAAGAACTaGACCCATGGGTTGGTGCTGCCACTTTCCGGAGCT +
Preference number: 6 (lower is better)
Translates to: RALHLFSVEQKN*THGLVLPLSGA
Trigger: AGCTCCGGAAAGTGGCAGCACCAACCCATGGGTTCAGTTCTTTTGTTCCACGGAGAACAGGTGAAGGGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS CCA 72 bp AGCACCTCCCCTCAAACGAGACCCAGAGCTGGCGAATaGACTCAGCTCTGGATTGCCTGGAATAAGAGGGAA +
Preference number: 6 (lower is better)
Translates to: STSPQTRPRAGE*TQLWIAWNKRE
Trigger: TTCCCTCTTATTCCAGGCAATCCAGAGCTGAGTCCATTCGCCAGCTCTGGGTCTCGTTTGAGGGGAGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS TCA 72 bp TCCTGTCGAGGACTCCAAGGAGAGACGGGGCTAGTGTaGGGTGTGGCTGGTAAGTTAAAGTTCATCACCACC +
Preference number: 6 (lower is better)
Translates to: SCRGLQGETGLV*GVAGKLKFITT
Trigger: GGTGGTGATGAACTTTAACTTACCAGCCACACCTCACACTAGCCCCGTCTCTCCTTGGAGTCCTCGACAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS CCA 72 bp CAAACGAGACCCAGAGCTGGCGAATGGACTCAGCTCTaGATTGCCTGGAATAAGAGGGAAGAGAGCGCAGAA +
Preference number: 6 (lower is better)
Translates to: QTRPRAGEWTQL*IAWNKREESAE
Trigger: TTCTGCGCTCTCTTCCCTCTTATTCCAGGCAATCCAGAGCTGAGTCCATTCGCCAGCTCTGGGTCTCGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000528902.1
CDS CAA 90 bp TCCAATCTGGGTGGGCTTCCATCAAACTGGTACTGGATGATGTTGTaGAAGACCTCCAGGAGGAAGAAGACCAGGTGGTGGTTCTGGGCG +
Preference number: 6 (lower is better)
Translates to: SNLGGLPSNWYWMML*KTSRRKKTRWWFWA
Trigger: CGCCCAGAACCACCACCTGGTCTTCTTCCTCCTGGAGGTCTTCAACAACATCATCCAGTACCAGTTTGATGGAAGCCCACCCAGATTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578002.1
CDS GCA 72 bp AGAAGAGGATGGGGACAAGGATGTCTAGGACGTCGCTaGTCTTCAGCACGAAGAAGAGGAATTTCTAGGGGT +
Preference number: 6 (lower is better)
Translates to: RRGWGQGCLGRR*SSARRRGISRG
Trigger: ACCCCTAGAAATTCCTCTTCTTCGTGCTGAAGAGCAGCGACGTCCTAGACATCCTTGTCCCCATCCTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583244.1