RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HIC2 (Homo sapiens)

Ensembl gene IDs: ENSG00000169635

Ensembl transcript IDs: ENST00000407464.7, ENST00000407598.2, ENST00000443632.2

Found 696 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCAAGCCGCCTGCAACAAAGGGACCAGGTCCCAGCGAGACCCACGTaGCCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGAGCTGGG +
Preference number: 1 (lower is better)
Translates to: PSRLQQRDQVPARPT*PSPQALRWPPRGAG
Trigger: CCCAGCTCCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGGACCTGGTCCCTTTGTTGCAGGCGGCTTGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR TCA 90 bp GCGGCCCAGCCCGGATCGCACTCCTGCACAGGGCCTGAGGTCCAGTaGATACTGACGGATTTTGGGAGTGGGTGGGCGGCCCGGTGCCCC +
Preference number: 1 (lower is better)
Translates to: AAQPGSHSCTGPEVQ*ILTDFGSGWAARCP
Trigger: GGGGCACCGGGCCGCCCACCCACTCCCAAAATCCGTCAGTATTCACTGGACCTCAGGCCCTGTGCAGGAGTGCGATCCGGGCTGGGCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR GCA 90 bp ACCCTGGCCGTGGCCAGCGTCCCACTGCCCTTTCTCCAAGCCGCCTaGAACAAAGGGACCAGGTCCCAGCGAGACCCACGTGACCCAGCC +
Preference number: 1 (lower is better)
Translates to: TLAVASVPLPFLQAA*NKGTRSQRDPRDPA
Trigger: GGCTGGGTCACGTGGGTCTCGCTGGGACCTGGTCCCTTTGTTGCAGGCGGCTTGGAGAAAGGGCAGTGGGACGCTGGCCACGGCCAGGGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR TCA 90 bp GCAGCAGGGGGACCCAAGCCCAGACTCGGGTCCTGTGGCCAGAACTaGCGGCCATCCCCGCGTAGGCTAGCTGGTCAGGACCAGCATGGT +
Preference number: 1 (lower is better)
Translates to: AAGGPKPRLGSCGQN*RPSPRRLAGQDQHG
Trigger: ACCATGCTGGTCCTGACCAGCTAGCCTACGCGGGGATGGCCGTCAGTTCTGGCCACAGGACCCGAGTCTGGGCTTGGGTCCCCCTGCTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR TCA 90 bp AGCCCGGATCGCACTCCTGCACAGGGCCTGAGGTCCAGTGAATACTaGCGGATTTTGGGAGTGGGTGGGCGGCCCGGTGCCCCCGAGTGG +
Preference number: 1 (lower is better)
Translates to: SPDRTPAQGLRSSEY*RILGVGGRPGAPEW
Trigger: CCACTCGGGGGCACCGGGCCGCCCACCCACTCCCAAAATCCGTCAGTATTCACTGGACCTCAGGCCCTGTGCAGGAGTGCGATCCGGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR TCA 90 bp AGCCTGCCCAGCGGCCCAGCCCGGATCGCACTCCTGCACAGGGCCTaGGGTCCAGTGAATACTGACGGATTTTGGGAGTGGGTGGGCGGC +
Preference number: 1 (lower is better)
Translates to: SLPSGPARIALLHRA*GPVNTDGFWEWVGG
Trigger: GCCGCCCACCCACTCCCAAAATCCGTCAGTATTCACTGGACCTCAGGCCCTGTGCAGGAGTGCGATCCGGGCTGGGCCGCTGGGCAGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR GCA 90 bp GGCCACCCGGAGCCTCCACTGGACCCAGGGTCTTGCCCCTGCTGCTaGATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGT +
Preference number: 1 (lower is better)
Translates to: GHPEPPLDPGSCPCC*ITSLLLPWVPGEQG
Trigger: ACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAGCAGCAGGGGCAAGACCCTGGGTCCAGTGGAGGCTCCGGGTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR GCA 90 bp GGTAGGCGGTGGGGTCACCCTGACTGTCCCAGCGCCAGTGAACAGTaGCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACCT +
Preference number: 1 (lower is better)
Translates to: GRRWGHPDCPSASEQ*HPGSRREGSAPPAP
Trigger: AGGTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAGGGTGACCCCACCGCCTACC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR CCA 90 bp CCAGGGTCTTGCCCCTGCTGCTGCATCACCTCGCTTCTCCTTCCATaGGTTCCCGGGGAGCAAGGTGGCAGAGGGCGCCCGCGGGTCTTT +
Preference number: 1 (lower is better)
Translates to: PGSCPCCCITSLLLP*VPGEQGGRGRPRVF
Trigger: AAAGACCCGCGGGCGCCCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAGCAGCAGGGGCAAGACCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR CCA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTaGGCAGTGGGGGCCAGAGGGGCCACCCGGAGCCTCCACTGGACC +
Preference number: 1 (lower is better)
Translates to: LSALLGTDCPLKLWV*AVGARGATRSLHWT
Trigger: GGTCCAGTGGAGGCTCCGGGTGGCCCCTCTGGCCCCCACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR GCA 90 bp AGTGGCAGGATGAGGGCTCACTTCCGCCTCACCCTGGCCGGGAGCTaGAAAGACCTGCCACCCTCCTCATGGTTCCCCTGTCAGCACCCA +
Preference number: 1 (lower is better)
Translates to: SGRMRAHFRLTLAGS*KDLPPSSWFPCQHP
Trigger: TGGGTGCTGACAGGGGAACCATGAGGAGGGTGGCAGGTCTTTGCAGCTCCCGGCCAGGGTGAGGCGGAAGTGAGCCCTCATCCTGCCACT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR CCA 90 bp GGTAGACGGGCTGGGACCCCTGGCTTCCCTCCTCTCGGCTCTGCTTaGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGGGGGC +
Preference number: 1 (lower is better)
Translates to: GRRAGTPGFPPLGSA*YGLSIKALGVGSGG
Trigger: GCCCCCACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAGGAGGGAAGCCAGGGGTCCCAGCCCGTCTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR TCA 90 bp CCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGTaGGCTGCAGGCACTGGGCCACTTGGCGCCCTGCTGGCTCCTGCA +
Preference number: 1 (lower is better)
Translates to: PRGGCGQRLKGKTHR*AAGTGPLGALLAPA
Trigger: TGCAGGAGCCAGCAGGGCGCCAAGTGGCCCAGTGCCTGCAGCTCACCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR TCA 90 bp TGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGCCAGGCGCGTaGACATTTCCCGTGCGGTACAGACTTTGTGTCATGTGGCTTAAG +
Preference number: 1 (lower is better)
Translates to: CGCPQPGRPCTRPGA*TFPVRYRLCVMWLK
Trigger: CTTAAGCCACATGACACAAAGTCTGTACCGCACGGGAAATGTTCACGCGCCTGGCCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR TCA 90 bp CCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTGGCTTaGGTGGGACCCTCGCATCAACCCATCCCCAAGGGTCACGGGCAG +
Preference number: 1 (lower is better)
Translates to: PPESTELRKGPGFLA*VGPSHQPIPKGHGQ
Trigger: CTGCCCGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR CCA 90 bp GGGACCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTaGCTTGAGTGGGACCCTCGCATCAACCCATCCCCAAGGGTCACG +
Preference number: 1 (lower is better)
Translates to: GTHQSRQSCAKVPAF*LEWDPRINPSPRVT
Trigger: CGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR GCA 90 bp AGCCCGGGAGGCCATGCACACGGCCAGGCGCGTGAACATTTCCCGTaGGGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCG +
Preference number: 1 (lower is better)
Translates to: SPGGHAHGQAREHFP*GTDFVSCGLSADGA
Trigger: CGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACCGCACGGGAAATGTTCACGCGCCTGGCCGTGTGCATGGCCTCCCGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR CCA 90 bp CAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTGGCTTGAGTaGGACCCTCGCATCAACCCATCCCCAAGGGTCACGGGCAGAGCA +
Preference number: 1 (lower is better)
Translates to: QSRQSCAKVPAFWLE*DPRINPSPRVTGRA
Trigger: TGCTCTGCCCGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR GCA 90 bp CCACCTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATaGATACGGCACACACCACACATAGACACACACATACGCACATAC +
Preference number: 1 (lower is better)
Translates to: PPCSARKEGKRNICP*IRHTPHIDTHIRTY
Trigger: GTATGTGCGTATGTGTGTGTCTATGTGTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR GCA 90 bp AAGTCTCCACCTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTaGCCATGCATACGGCACACACCACACATAGACACACACATACGC +
Preference number: 1 (lower is better)
Translates to: KSPPCSARKEGKRNI*PCIRHTPHIDTHIR
Trigger: GCGTATGTGTGTGTCTATGTGTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAGGTGGAGACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR TCA 90 bp AGGTGGGGAAAGTTGGTGAGGGTCCGGATCGTTCATTTCACAGGCTaGGGTGTATGGCTATGCTGCGAGTCTCTGAGATTCTTATTTGCT +
Preference number: 1 (lower is better)
Translates to: RWGKLVRVRIVHFTG*GVWLCCESLRFLFA
Trigger: AGCAAATAAGAATCTCAGAGACTCGCAGCATAGCCATACACCTCAGCCTGTGAAATGAACGATCCGGACCCTCACCAACTTTCCCCACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR TCA 90 bp GAGTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATaGATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCA +
Preference number: 1 (lower is better)
Translates to: ECQGLPLPVTNISLS*IQEVAKGQKSPPCS
Trigger: TGAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACACTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGGGGGCCTGGGTGGGATaGGGAGGTAGACGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGGAWVG*GGRRAG
Trigger: CCCAGCCCGTCTACCTCCCCATCCCACCCAGGCCCC...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
77% GC, longest homopolymer 8 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp AGCAGCAGGGGGACCCAAGCCCAGACTCGGGTCCTGTGGCCAGAACTGACGGCCTCCCGGGGAGCAAGGTaGCAGAGGGCGCCCGCGGGT +
Preference number: 2 (lower is better)
Translates to: SSRGTQAQTRVLWPELTASRGAR*QRAPAG
Trigger: ACCCGCGGGCGCCCTCTGCCACCTTGCTCCCCGGGA...GGCCGTCAGTTCTGGCCACAGGACCCGAGTCTGGGCTTGGGTCCCCCTGCTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR CCA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCACGGGCTGGGACCCCTaGCTTCCCTCCTCTCGGCTC +
Preference number: 2 (lower is better)
Translates to: ERWAPRQWPGARTAQGSATGWDP*LPSSRL
Trigger: GAGCCGAGAGGAGGGAAGCCAGGGGTCCCAGCCCGT...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR TCA 90 bp GCCAGAGGGCCTTGGGGGCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTACACGGCCAGCGGGGTaGGGCCTGCTCCCGACACCA +
Preference number: 2 (lower is better)
Translates to: ARGPWGLVSTGPSSLVPATRPAG*GLLPTP
Trigger: TGGTGTCGGGAGCAGGCCTCACCCCGCTGGCCGTGT...AGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR TCA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCCTGTCCCAGCGCCAGTaGACAGTGCCACCCTGGCTC +
Preference number: 2 (lower is better)
Translates to: ERWAPRQWPGARTAQGSALSQRQ*TVPPWL
Trigger: GAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAG...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCGGGGACGCGCAGGAGTaGCAGCGGCCCCTGTTACAT +
Preference number: 2 (lower is better)
Translates to: ERWAPRQWPGARTAQGSAGDAQE*QRPLLH
Trigger: ATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCC...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCGGCAAGAAGGGCTTCTaGGGCCTGGAGAGGTGGCGC +
Preference number: 2 (lower is better)
Translates to: ERWAPRQWPGARTAQGSAGKKGF*GLERWR
Trigger: GCGCCACCTCTCCAGGCCCCAGAAGCCCTTCTTGCC...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR TCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCCCAGCGAGACCCACGTaGCCCAGCCCACAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: GAILGWDHHREGSARSLIPARPT*PSPQAL
Trigger: CAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGG...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCAAGGAGGGAGGGATCTaGACCCCCAGCACCTGTTCC +
Preference number: 2 (lower is better)
Translates to: ERWAPRQWPGARTAQGSAKEGGI*TPSTCS
Trigger: GGAACAGGTGCTGGGGGTGCAGATCCCTCCCTCCTT...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGTTTGTGTGCCCGGGGTaGCAGGGTCCCCTCGAGGTG +
Preference number: 2 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRFVCPG*QGPLEV
Trigger: CACCTCGAGGGGACCCTGGCACCCCGGGCACACAAA...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTACCCTGGCCGGGAGCTaGAAAGACCTGCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: APRQWPGARTAQGSAIPVTLAGS*KDLPPS
Trigger: GGAGGGTGGCAGGTCTTTGCAGCTCCCGGCCAGGGT...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp ACCAGGGCTGCACGCGCCCGCACAGACACAAGCACACGTGCACACACACAGACATCCCGGGGAGCAAGGTaGCAGAGGGCGCCCGCGGGT +
Preference number: 2 (lower is better)
Translates to: TRAARARTDTSTRAHTQTSRGAR*QRAPAG
Trigger: ACCCGCGGGCGCCCTCTGCCACCTTGCTCCCCGGGA...TGTCTGTGTGTGTGCACGTGTGCTTGTGTCTGTGCGGGCGCGTGCAGCCCTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTACCCGGAGCCTCCACTaGACCCAGGGTCTTGCCCCT +
Preference number: 2 (lower is better)
Translates to: APRQWPGARTAQGSAIPVTRSLH*TQGLAP
Trigger: AGGGGCAAGACCCTGGGTCCAGTGGAGGCTCCGGGT...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCTGGGCCCCGAGACAGTaGCCGGGGGCCAGGACTGCT +
Preference number: 2 (lower is better)
Translates to: GAILGWDHHREGSARSLIWAPRQ*PGARTA
Trigger: AGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCA...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR TCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTAAAAGCACTCTCCCCTaGGGCAGCCGAGGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: APRQWPGARTAQGSAIPVKSTLP*GSRGRA
Trigger: AGCCCTGCCTCGGCTGCCTCAGGGGAGAGTGCTTTT...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCCAGCGGGGTGAGGCCTaGTCCCGACACCACCCTGGC +
Preference number: 2 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELQRGEA*SRHHPG
Trigger: GCCAGGGTGGTGTCGGGAGCAGGCCTCACCCCGCTG...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCAAGGAGGGAGGGATCTaGACCCCCAGCACCTGTTCC +
Preference number: 2 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFKEGGI*TPSTCS
Trigger: GGAACAGGTGCTGGGGGTGCAGATCCCTCCCTCCTT...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTCGCCCTGCTGGCTCCTaGACACGACTTCCTAGGTGC +
Preference number: 2 (lower is better)
Translates to: APRQWPGARTAQGSAIPVRPAGS*TRLPRC
Trigger: GCACCTAGGAAGTCGTGTGCAGGAGCCAGCAGGGCG...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGGACTGCTCAGGGAAGTaGCATCCCTGTTCCCCGGGG +
Preference number: 2 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRDCSGK*HPCSPG
Trigger: CCCCGGGGAACAGGGATGGCACTTCCCTGAGCAGTC...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACACGGGCTGGGACCCCTaGCTTCCCTCCTCTCGGCTC +
Preference number: 2 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHTGWDP*LPSSRL
Trigger: GAGCCGAGAGGAGGGAAGCCAGGGGTCCCAGCCCGT...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATGGGGCCTGGGTGGGATaGGGAGGTAGACGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDGAWVG*GGRRAG
Trigger: CCCAGCCCGTCTACCTCCCCATCCCACCCAGGCCCC...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp ACCAGGGCTGCACGCGCCCGCACAGACACAAGCACACGTGCACACACACAGACAGGGGCCTGGGTGGGATaGGGAGGTAGACGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: TRAARARTDTSTRAHTQTGAWVG*GGRRAG
Trigger: CCCAGCCCGTCTACCTCCCCATCCCACCCAGGCCCC...TGTCTGTGTGTGTGCACGTGTGCTTGTGTCTGTGCGGGCGCGTGCAGCCCTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTCCCGACACCACCCTaGCCGTGGCCAGCGTCCCAC +
Preference number: 2 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDLPTPP*PWPASH
Trigger: GTGGGACGCTGGCCACGGCCAGGGTGGTGTCGGGAG...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR CAA 90 bp GGGCTGAGAGCCCTTGTCTGCTCTAAGGCCTGGCACCTTTGGCTTTaGTCCCCCACGCCTGGGGGTGGACGGATGCAGCCTCCTGCTCCC +
Preference number: 2 (lower is better)
Translates to: GLRALVCSKAWHLWL*SPTPGGGRMQPPAP
Trigger: GGGAGCAGGAGGCTGCATCCGTCCACCCCCAGGCGTGGGGGACAAAAGCCAAAGGTGCCAGGCCTTAGAGCAGACAAGGGCTCTCAGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR TCA 90 bp GCCAGAGGGCCTTGGGGGCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTTCGCACAAACGTCGTTaGGTGAGGGGCCTCTGCTCC +
Preference number: 2 (lower is better)
Translates to: ARGPWGLVSTGPSSLVPASHKRR*VRGLCS
Trigger: GGAGCAGAGGCCCCTCACTCAACGACGTTTGTGCGA...AGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR GCA 90 bp CAGGAGTGGGGACCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTCAGCGGGGTGAGGCCTaGTCCCGACACCACCCTGGC +
Preference number: 2 (lower is better)
Translates to: QEWGPTRVDRAAQRSRLFQRGEA*SRHHPG
Trigger: GCCAGGGTGGTGTCGGGAGCAGGCCTCACCCCGCTG...AAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCCCACTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR GCA 90 bp GCCAGAGGGCCTTGGGGGCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTAGCGCCAGTGAACAGTaGCACCCTGGCTCAAGGAGG +
Preference number: 2 (lower is better)
Translates to: ARGPWGLVSTGPSSLVPASASEQ*HPGSRR
Trigger: CCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCT...AGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR GCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCGGCCACTTGGCGCCCTaGTGGCTCCTGCACACGACT +
Preference number: 2 (lower is better)
Translates to: GAILGWDHHREGSARSLIGHLAP*WLLHTT
Trigger: AGTCGTGTGCAGGAGCCAGCAGGGCGCCAAGTGGCC...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp ACCAGGGCTGCACGCGCCCGCACAGACACAAGCACACGTGCACACACACAGACAACGGGCTGGGACCCCTaGCTTCCCTCCTCTCGGCTC +
Preference number: 2 (lower is better)
Translates to: TRAARARTDTSTRAHTQTTGWDP*LPSSRL
Trigger: GAGCCGAGAGGAGGGAAGCCAGGGGTCCCAGCCCGT...TGTCTGTGTGTGTGCACGTGTGCTTGTGTCTGTGCGGGCGCGTGCAGCCCTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCAGGGCTTCTGGGGCCTaGAGAGGTGGCGCGCCGACA +
Preference number: 2 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELRASGA*RGGAPT
Trigger: TGTCGGCGCGCCACCTCTCCAGGCCCCAGAAGCCCT...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp GCCAGAGGGCCTTGGGGGCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTACGCCGCTCACCACTTaGGTCCCTGAACTCAGGCTC +
Preference number: 2 (lower is better)
Translates to: ARGPWGLVSTGPSSLVPATPLTT*VPELRL
Trigger: GAGCCTGAGTTCAGGGACCCAAGTGGTGAGCGGCGT...AGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR TCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTATAGGAGTGGCAGGATaGGGGCTCACTTCCGCCTCA +
Preference number: 2 (lower is better)
Translates to: APRQWPGARTAQGSAIPVIGVAG*GLTSAS
Trigger: TGAGGCGGAAGTGAGCCCTCATCCTGCCACTCCTAT...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp GCCAGAGGGCCTTGGGGGCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTCCCTCCTCTCGGCTCTaGTTGGTACGGACTGTCCAT +
Preference number: 2 (lower is better)
Translates to: ARGPWGLVSTGPSSLVPAPSSRL*LVRTVH
Trigger: ATGGACAGTCCGTACCAAGCAGAGCCGAGAGGAGGG...AGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR GCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCAGAACCAGGGCTaGACGCGCCCGCACAGACAC +
Preference number: 2 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDLQNQG*TRPHRH
Trigger: GTGTCTGTGCGGGCGCGTGCAGCCCTGGTTCTGCAG...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCACCCTGGCCGGGAGCTaGAAAGACCTGCCACCCTCC +
Preference number: 2 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELTLAGS*KDLPPS
Trigger: GGAGGGTGGCAGGTCTTTGCAGCTCCCGGCCAGGGT...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATACCCGGAGCCTCCACTaGACCCAGGGTCTTGCCCCT +
Preference number: 2 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDTRSLH*TQGLAP
Trigger: AGGGGCAAGACCCTGGGTCCAGTGGAGGCTCCGGGT...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CAGGTCCCTAGCCTGACTTGCTGGAACCTGAGACCCAGGGTCCAGTCCTCTGTCATGAGGGGCGAGAGGTaGGCCCCGAGACAGTGGCCG +
Preference number: 2 (lower is better)
Translates to: QVPSLTCWNLRPRVQSSVMRGER*APRQWP
Trigger: CGGCCACTGTCTCGGGGCCCACCTCTCGCCCCTCAT...GACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGCCCCACAGCTTCAGCTaGCTGAAGACAGTGGGACTG +
Preference number: 2 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRPHSFS*LKTVGL
Trigger: CAGTCCCACTGTCTTCAGCCAGCTGAAGCTGTGGGG...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CTGCCTGAGGTGGGGAAAGTTGGTGAGGGTCCGGATCGTTCATTTCACAGGCTGCCGGCCAGAGGGCCTTaGGGGCTGGTCAGCACGGGC +
Preference number: 2 (lower is better)
Translates to: LPEVGKVGEGPDRSFHRLPARGP*GLVSTG
Trigger: GCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGCCGG...CAGCCTGTGAAATGAACGATCCGGACCCTCACCAACTTTCCCCACCTCAGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR TCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGACACGGCCAGCGGGGTaGGGCCTGCTCCCGACACCA +
Preference number: 2 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQTRPAG*GLLPTP
Trigger: TGGTGTCGGGAGCAGGCCTCACCCCGCTGGCCGTGT...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTTCTTGCCCCTGCTGCTaGATCACCTCGCTTCTCCTT +
Preference number: 2 (lower is better)
Translates to: APRQWPGARTAQGSAIPVSCPCC*ITSLLL
Trigger: AAGGAGAAGCGAGGTGATGCAGCAGCAGGGGCAAGA...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp CAGGTCCCTAGCCTGACTTGCTGGAACCTGAGACCCAGGGTCCAGTCCTCTGTCTTTGTGTGCCCGGGGTaGCAGGGTCCCCTCGAGGTG +
Preference number: 2 (lower is better)
Translates to: QVPSLTCWNLRPRVQSSVFVCPG*QGPLEV
Trigger: CACCTCGAGGGGACCCTGGCACCCCGGGCACACAAA...GACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CACACACACACGCACGCACACACAAATGAAAACAAGAGTACCGACGGCCCCGGCTGGGGCCTGGAGAGGTaGCGCGCCGACACCCCTGCA +
Preference number: 2 (lower is better)
Translates to: HTHTHAHTNENKSTDGPGWGLER*RADTPA
Trigger: TGCAGGGGTGTCGGCGCGCCACCTCTCCAGGCCCCA...GCCGGGGCCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGCGTGTGTGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR CAA 90 bp CCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTGGCTaGAGTGGGACCCTCGCATCAACCCATCCCCAAGGGTCACGGGCA +
Preference number: 2 (lower is better)
Translates to: PTRVDRAAQRSRLFG*SGTLASTHPQGSRA
Trigger: TGCCCGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR GCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCTCTTGCCCCTGCTGCTaGATCACCTCGCTTCTCCTT +
Preference number: 2 (lower is better)
Translates to: PSASEQCHPGSRREGSAPSCPCC*ITSLLL
Trigger: AAGGAGAAGCGAGGTGATGCAGCAGCAGGGGCAAGA...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp TTTTGGCTTGAGTGGGACCCTCGCATCAACCCATCCCCAAGGGTCACGGGCAGAGGCCACTTGGCGCCCTaGTGGCTCCTGCACACGACT +
Preference number: 2 (lower is better)
Translates to: FWLEWDPRINPSPRVTGRGHLAP*WLLHTT
Trigger: AGTCGTGTGCAGGAGCCAGCAGGGCGCCAAGTGGCC...TCTGCCCGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR CCA 90 bp CAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACACCACAGGGCTTCTGGGGCCTaGAGAGGTGGCGCGCCGACA +
Preference number: 2 (lower is better)
Translates to: QRGRRESETSAHAYGTHHRASGA*RGGAPT
Trigger: TGTCGGCGCGCCACCTCTCCAGGCCCCAGAAGCCCT...GTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGCACTTGGCGCCCTGCTaGCTCCTGCACACGACTTCC +
Preference number: 2 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRHLAPC*LLHTTS
Trigger: GGAAGTCGTGTGCAGGAGCCAGCAGGGCGCCAAGTG...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CAGGTCCCTAGCCTGACTTGCTGGAACCTGAGACCCAGGGTCCAGTCCTCTGTCACTTCCGCCTCACCCTaGCCGGGAGCTGCAAAGACC +
Preference number: 2 (lower is better)
Translates to: QVPSLTCWNLRPRVQSSVTSASP*PGAAKT
Trigger: GGTCTTTGCAGCTCCCGGCCAGGGTGAGGCGGAAGT...GACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR TCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACCAGCGAGACCCACGTaGCCCAGCCCACAGGCCCTG +
Preference number: 2 (lower is better)
Translates to: LVQRGRRESETSAHAYGTPARPT*PSPQAL
Trigger: CAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGG...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR TCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTGCACGCACACACAAATaGAAACAAGAGTACCGACGG +
Preference number: 2 (lower is better)
Translates to: APRQWPGARTAQGSAIPVARTHK*KQEYRR
Trigger: CCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGC...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACTCTTGCCCCTGCTGCTaGATCACCTCGCTTCTCCTT +
Preference number: 2 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHSCPCC*ITSLLL
Trigger: AAGGAGAAGCGAGGTGATGCAGCAGCAGGGGCAAGA...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGCCAGGGTCTTGCCCCTaGTGCTGCATCACCTCGCTT +
Preference number: 2 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRPGSCP*CCITSL
Trigger: AAGCGAGGTGATGCAGCAGCAGGGGCAAGACCCTGG...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp CACACACACACGCACGCACACACAAATGAAAACAAGAGTACCGACGGCCCCGGCCTGCAGAACCAGGGCTaGACGCGCCCGCACAGACAC +
Preference number: 2 (lower is better)
Translates to: HTHTHAHTNENKSTDGPGLQNQG*TRPHRH
Trigger: GTGTCTGTGCGGGCGCGTGCAGCCCTGGTTCTGCAG...GCCGGGGCCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGCGTGTGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp CTGCCTGAGGTGGGGAAAGTTGGTGAGGGTCCGGATCGTTCATTTCACAGGCTGCTGCAGAACCAGGGCTaGACGCGCCCGCACAGACAC +
Preference number: 2 (lower is better)
Translates to: LPEVGKVGEGPDRSFHRLLQNQG*TRPHRH
Trigger: GTGTCTGTGCGGGCGCGTGCAGCCCTGGTTCTGCAG...CAGCCTGTGAAATGAACGATCCGGACCCTCACCAACTTTCCCCACCTCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR GCA 90 bp CAGGTCCCTAGCCTGACTTGCTGGAACCTGAGACCCAGGGTCCAGTCCTCTGTCAAGGAGGGAGGGATCTaGACCCCCAGCACCTGTTCC +
Preference number: 2 (lower is better)
Translates to: QVPSLTCWNLRPRVQSSVKEGGI*TPSTCS
Trigger: GGAACAGGTGCTGGGGGTGCAGATCCCTCCCTCCTT...GACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp CAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACACCACGGGGACGCGCAGGAGTaGCAGCGGCCCCTGTTACAT +
Preference number: 2 (lower is better)
Translates to: QRGRRESETSAHAYGTHHGDAQE*QRPLLH
Trigger: ATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCC...GTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATTCGCTTCTCCTTCCATaGGTTCCCGGGGAGCAAGGT +
Preference number: 2 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDSLLLP*VPGEQG
Trigger: ACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGA...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCTCGCTTCTCCTTCCATaGGTTCCCGGGGAGCAAGGT +
Preference number: 2 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELSLLLP*VPGEQG
Trigger: ACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGA...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACTCCCGACACCACCCTaGCCGTGGCCAGCGTCCCAC +
Preference number: 2 (lower is better)
Translates to: LVQRGRRESETSAHAYGTLPTPP*PWPASH
Trigger: GTGGGACGCTGGCCACGGCCAGGGTGGTGTCGGGAG...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CTGCCTGAGGTGGGGAAAGTTGGTGAGGGTCCGGATCGTTCATTTCACAGGCTGGGCAAGAAGGGCTTCTaGGGCCTGGAGAGGTGGCGC +
Preference number: 2 (lower is better)
Translates to: LPEVGKVGEGPDRSFHRLGKKGF*GLERWR
Trigger: GCGCCACCTCTCCAGGCCCCAGAAGCCCTTCTTGCC...CAGCCTGTGAAATGAACGATCCGGACCCTCACCAACTTTCCCCACCTCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR CCA 90 bp CAGGAGTGGGGACCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTCTGCCACCCTCCTCATaGTTCCCCTGTCAGCACCCA +
Preference number: 2 (lower is better)
Translates to: QEWGPTRVDRAAQRSRLFLPPSS*FPCQHP
Trigger: TGGGTGCTGACAGGGGAACCATGAGGAGGGTGGCAG...AAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCCCACTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR CCA 90 bp CAGGAGTGGGGACCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTACGCCGCTCACCACTTaGGTCCCTGAACTCAGGCTC +
Preference number: 2 (lower is better)
Translates to: QEWGPTRVDRAAQRSRLFTPLTT*VPELRL
Trigger: GAGCCTGAGTTCAGGGACCCAAGTGGTGAGCGGCGT...AAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCCCACTCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR TCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGAAAAGCACTCTCCCCTaGGGCAGCCGAGGCAGGGCT +
Preference number: 2 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQKSTLP*GSRGRA
Trigger: AGCCCTGCCTCGGCTGCCTCAGGGGAGAGTGCTTTT...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR TCA 90 bp CTGCCTGAGGTGGGGAAAGTTGGTGAGGGTCCGGATCGTTCATTTCACAGGCTGACCCTTCTCTGCCCGTaGGCCACTCCAGGGCCAACT +
Preference number: 2 (lower is better)
Translates to: LPEVGKVGEGPDRSFHRLTLLCP*ATPGPT
Trigger: AGTTGGCCCTGGAGTGGCTCACGGGCAGAGAAGGGT...CAGCCTGTGAAATGAACGATCCGGACCCTCACCAACTTTCCCCACCTCAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR GCA 90 bp TTTTGGCTTGAGTGGGACCCTCGCATCAACCCATCCCCAAGGGTCACGGGCAGAAGCGCCAGTGAACAGTaGCACCCTGGCTCAAGGAGG +
Preference number: 2 (lower is better)
Translates to: FWLEWDPRINPSPRVTGRSASEQ*HPGSRR
Trigger: CCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCT...TCTGCCCGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR GCA 90 bp CAGGAGTGGGGACCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTGGAGCTGCAAAGACCTaGCACCCTCCTCATGGTTCC +
Preference number: 2 (lower is better)
Translates to: QEWGPTRVDRAAQRSRLFGAAKT*HPPHGS
Trigger: GGAACCATGAGGAGGGTGGCAGGTCTTTGCAGCTCC...AAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCCCACTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR CCA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGTCGCTTCTCCTTCCATaGGTTCCCGGGGAGCAAGGT +
Preference number: 2 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRSLLLP*VPGEQG
Trigger: ACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGA...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CTGGGAAATAGGAGGACCTTGGTCCCTTTAGGGGGCATGCCAGGGCTGAGAGCCTGTCCATTAAAGCTCTaGGTGTGGGCAGTGGGGGCC +
Preference number: 2 (lower is better)
Translates to: LGNRRTLVPLGGMPGLRACPLKL*VWAVGA
Trigger: GGCCCCCACTGCCCACACCCAGAGCTTTAATGGACA...GGCTCTCAGCCCTGGCATGCCCCCTAAAGGGACCAAGGTCCTCCTATTTCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR CCA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCCCCTCGAGGTGGATGTaGCCAAAGGCTCAAAGGGAA +
Preference number: 2 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELPSRWM*PKAQRE
Trigger: TTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGG...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGAAACTCTTGCAGGAATaGAGGATAGGAGTGGCAGGA +
Preference number: 2 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRKLLQE*RIGVAG
Trigger: TCCTGCCACTCCTATCCTCCATTCCTGCAAGAGTTT...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGATGAGGGGCGAGAGGTaGGCCCCGAGACAGTGGCCG +
Preference number: 2 (lower is better)
Translates to: CKGITYFHESPHRCGCPQMRGER*APRQWP
Trigger: CGGCCACTGTCTCGGGGCCCACCTCTCGCCCCTCAT...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGGGGGCCATCTTAGGCTaGGATCACCACAGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQGAILG*DHHREG
Trigger: GCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGGGGTCTTGCCCCTGCTaGTGCATCACCTCGCTTCTC +
Preference number: 2 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQGSCPC*CITSLL
Trigger: GAGAAGCGAGGTGATGCAGCAGCAGGGGCAAGACCC...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp CTGCCTGAGGTGGGGAAAGTTGGTGAGGGTCCGGATCGTTCATTTCACAGGCTGCCAGGGTCTTGCCCCTaGTGCTGCATCACCTCGCTT +
Preference number: 2 (lower is better)
Translates to: LPEVGKVGEGPDRSFHRLPGSCP*CCITSL
Trigger: AAGCGAGGTGATGCAGCAGCAGGGGCAAGACCCTGG...CAGCCTGTGAAATGAACGATCCGGACCCTCACCAACTTTCCCCACCTCAGGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR GCA 90 bp CAGGTCCCTAGCCTGACTTGCTGGAACCTGAGACCCAGGGTCCAGTCCTCTGTCTTTCTCCAAGCCGCCTaGAACAAAGGGACCAGGTCC +
Preference number: 2 (lower is better)
Translates to: QVPSLTCWNLRPRVQSSVFLQAA*NKGTRS
Trigger: GGACCTGGTCCCTTTGTTGCAGGCGGCTTGGAGAAA...GACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCGGAAAGCGAAACATCTaGCCATGCATACGGCACACA +
Preference number: 2 (lower is better)
Translates to: GAILGWDHHREGSARSLIGKRNI*PCIRHT
Trigger: TGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCC...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGCCACAGAGGTTTGTGTaGCCGGGGTGCCAGGGTCCC +
Preference number: 2 (lower is better)
Translates to: CKGITYFHESPHRCGCPQPQRFV*PGCQGP
Trigger: GGGACCCTGGCACCCCGGGCACACAAACCTCTGTGG...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACAACCCGGAGCCTCCACTaGACCCAGGGTCTTGCCCCT +
Preference number: 2 (lower is better)
Translates to: LVQRGRRESETSAHAYGTTRSLH*TQGLAP
Trigger: AGGGGCAAGACCCTGGGTCCAGTGGAGGCTCCGGGT...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp TTTTGGCTTGAGTGGGACCCTCGCATCAACCCATCCCCAAGGGTCACGGGCAGATGTCCATTAAAGCTCTaGGTGTGGGCAGTGGGGGCC +
Preference number: 2 (lower is better)
Translates to: FWLEWDPRINPSPRVTGRCPLKL*VWAVGA
Trigger: GGCCCCCACTGCCCACACCCAGAGCTTTAATGGACA...TCTGCCCGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR GCA 90 bp CAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACACCACCCCTCCTCTCGGCTCTaGTTGGTACGGACTGTCCAT +
Preference number: 2 (lower is better)
Translates to: QRGRRESETSAHAYGTHHPSSRL*LVRTVH
Trigger: ATGGACAGTCCGTACCAAGCAGAGCCGAGAGGAGGG...GTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCGGAAAGCGAAACATCTaGCCATGCATACGGCACACA +
Preference number: 2 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELGKRNI*PCIRHT
Trigger: TGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCC...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp CTGCCTGAGGTGGGGAAAGTTGGTGAGGGTCCGGATCGTTCATTTCACAGGCTGGGAGCTGCAAAGACCTaGCACCCTCCTCATGGTTCC +
Preference number: 2 (lower is better)
Translates to: LPEVGKVGEGPDRSFHRLGAAKT*HPPHGS
Trigger: GGAACCATGAGGAGGGTGGCAGGTCTTTGCAGCTCC...CAGCCTGTGAAATGAACGATCCGGACCCTCACCAACTTTCCCCACCTCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR CCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGGGGGCCATCTTAGGCTaGGATCACCACAGGGAGGGC +
Preference number: 2 (lower is better)
Translates to: CKGITYFHESPHRCGCPQGAILG*DHHREG
Trigger: GCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR TCA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGGCACGCACACACAAATaGAAACAAGAGTACCGACGG +
Preference number: 2 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRARTHK*KQEYRR
Trigger: CCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGC...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR TCA 90 bp CAGGAGTGGGGACCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTTCTGCTCCCAGTCCCTaGAGTTCTGCAAAGGAATCA +
Preference number: 2 (lower is better)
Translates to: QEWGPTRVDRAAQRSRLFSAPSP*SSAKES
Trigger: TGATTCCTTTGCAGAACTTCAGGGACTGGGAGCAGA...AAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCCCACTCCTG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR GCA 90 bp CAGGTCCCTAGCCTGACTTGCTGGAACCTGAGACCCAGGGTCCAGTCCTCTGTCGTCAAGGGCTTCCACTaGCAGTCACCAACATATCGT +
Preference number: 2 (lower is better)
Translates to: QVPSLTCWNLRPRVQSSVVKGFH*QSPTYR
Trigger: ACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGAC...GACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CAGGAGTGGGGACCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTCCTCTCGGCTCTGCTTaGTACGGACTGTCCATTAAA +
Preference number: 2 (lower is better)
Translates to: QEWGPTRVDRAAQRSRLFPLGSA*YGLSIK
Trigger: TTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAGG...AAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCCCACTCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR CCA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGACTCCCGACACCACCCTaGCCGTGGCCAGCGTCCCAC +
Preference number: 2 (lower is better)
Translates to: VSRASTASHQHIVVMNSRLPTPP*PWPASH
Trigger: GTGGGACGCTGGCCACGGCCAGGGTGGTGTCGGGAG...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGACGCCGCTCACCACTTaGGTCCCTGAACTCAGGCTC +
Preference number: 2 (lower is better)
Translates to: CKGITYFHESPHRCGCPQTPLTT*VPELRL
Trigger: GAGCCTGAGTTCAGGGACCCAAGTGGTGAGCGGCGT...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp CAGGAGTGGGGACCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTAAACTCTTGCAGGAATaGAGGATAGGAGTGGCAGGA +
Preference number: 2 (lower is better)
Translates to: QEWGPTRVDRAAQRSRLFKLLQE*RIGVAG
Trigger: TCCTGCCACTCCTATCCTCCATTCCTGCAAGAGTTT...AAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCCCACTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR TCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGCTCACTGAGTATGGGTaGAGTCCATGGGTCTCCTCC +
Preference number: 2 (lower is better)
Translates to: CKGITYFHESPHRCGCPQLTEYG*SPWVSS
Trigger: GGAGGAGACCCATGGACTTCACCCATACTCAGTGAG...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp AGCAGCAGGGGGACCCAAGCCCAGACTCGGGTCCTGTGGCCAGAACTGACGGCCGATACAATACTAAGGTaGATACAATACTATGTCGCA +
Preference number: 2 (lower is better)
Translates to: SSRGTQAQTRVLWPELTADTILR*IQYYVA
Trigger: TGCGACATAGTATTGTATCCACCTTAGTATTGTATC...GGCCGTCAGTTCTGGCCACAGGACCCGAGTCTGGGCTTGGGTCCCCCTGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR GCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGCGAAACATCTGCCCATaGATACGGCACACACCACAC +
Preference number: 2 (lower is better)
Translates to: CKGITYFHESPHRCGCPQRNICP*IRHTPH
Trigger: GTGTGGTGTGTGCCGTATGCATGGGCAGATGTTTCG...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR TCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGCACCACTTGGGTCCCTaGACTCAGGCTCTGTTTTTA +
Preference number: 2 (lower is better)
Translates to: CKGITYFHESPHRCGCPQHHLGP*TQALFL
Trigger: TAAAAACAGAGCCTGAGTTCAGGGACCCAAGTGGTG...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGAGGGTCTTGCCCCTGCTaGTGCATCACCTCGCTTCTC +
Preference number: 2 (lower is better)
Translates to: VSRASTASHQHIVVMNSRGSCPC*CITSLL
Trigger: GAGAAGCGAGGTGATGCAGCAGCAGGGGCAAGACCC...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTAGGGCTTCTGGGGCCTaGAGAGGTGGCGCGCCGACA +
Preference number: 2 (lower is better)
Translates to: KARYNTKVDTILCRTNVVRASGA*RGGAPT
Trigger: TGTCGGCGCGCCACCTCTCCAGGCCCCAGAAGCCCT...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGACCCTCCTCTCGGCTCTaGTTGGTACGGACTGTCCAT +
Preference number: 2 (lower is better)
Translates to: VSRASTASHQHIVVMNSRPSSRL*LVRTVH
Trigger: ATGGACAGTCCGTACCAAGCAGAGCCGAGAGGAGGG...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR TCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGGGGAAAACCCACAGGTaGGCTGCAGGCACTGGGCCA +
Preference number: 2 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEGKTHR*AAGTGP
Trigger: TGGCCCAGTGCCTGCAGCTCACCTGTGGGTTTTCCC...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR TCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTACACGGCCAGGCGCGTaGACATTTCCCGTGCGGTAC +
Preference number: 2 (lower is better)
Translates to: KARYNTKVDTILCRTNVVTRPGA*TFPVRY
Trigger: GTACCGCACGGGAAATGTTCACGCGCCTGGCCGTGT...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTCACTTGGCGCCCTGCTaGCTCCTGCACACGACTTCC +
Preference number: 2 (lower is better)
Translates to: KARYNTKVDTILCRTNVVHLAPC*LLHTTS
Trigger: GGAAGTCGTGTGCAGGAGCCAGCAGGGCGCCAAGTG...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR TCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGATGTGGCTTAAGTGCTaGTGGGGCGGGGTGGCGTCA +
Preference number: 2 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEMWLKC*WGGVAS
Trigger: TGACGCCACCCCGCCCCATCAGCACTTAAGCCACAT...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR TCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTATGTGGCTTAAGTGCTaGTGGGGCGGGGTGGCGTCA +
Preference number: 2 (lower is better)
Translates to: KARYNTKVDTILCRTNVVMWLKC*WGGVAS
Trigger: TGACGCCACCCCGCCCCATCAGCACTTAAGCCACAT...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGCTGCCACCCTCCTCATaGTTCCCCTGTCAGCACCCA +
Preference number: 2 (lower is better)
Translates to: DTILRWIQYYVAQTSLSELPPSS*FPCQHP
Trigger: TGGGTGCTGACAGGGGAACCATGAGGAGGGTGGCAG...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR CAA 90 bp GTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTaGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCAT +
Preference number: 2 (lower is better)
Translates to: VVMNSRGSKRSEVST*FSEEGGKAKHLPMH
Trigger: ATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCTTTCTCCAAGCCGCCTaGAACAAAGGGACCAGGTCC +
Preference number: 2 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFFLQAA*NKGTRS
Trigger: GGACCTGGTCCCTTTGTTGCAGGCGGCTTGGAGAAA...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTCCCTCGAGGTGGATGTaGCCAAAGGCTCAAAGGGAA +
Preference number: 2 (lower is better)
Translates to: KARYNTKVDTILCRTNVVPSRWM*PKAQRE
Trigger: TTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGG...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCCCTCTCGGCTCTGCTTaGTACGGACTGTCCATTAAA +
Preference number: 2 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFPLGSA*YGLSIK
Trigger: TTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAGG...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGGGCTCTGTTTTTAGCTaGAGGGTCTCTAGAGGGGTG +
Preference number: 2 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEGSVFS*RVSRGV
Trigger: CACCCCTCTAGAGACCCTCCAGCTAAAAACAGAGCC...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR TCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGCCCACAGAAGTATCTaGGGCTGGCTAATTACCAAG +
Preference number: 2 (lower is better)
Translates to: KARYNTKVDTILCRTNVVAHRSI*GWLITK
Trigger: CTTGGTAATTAGCCAGCCTCAGATACTTCTGTGGGC...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGCCTCTCGGCTCTGCTTaGTACGGACTGTCCATTAAA +
Preference number: 2 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEPLGSA*YGLSIK
Trigger: TTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAGG...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR GCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTCGTGAACATTTCCCGTaGGGTACAGACTTTGTGTCA +
Preference number: 2 (lower is better)
Translates to: KARYNTKVDTILCRTNVVREHFP*GTDFVS
Trigger: TGACACAAAGTCTGTACCGCACGGGAAATGTTCACG...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR TCA 72 bp CTGCAACAAAGGGACCAGGTCCCAGCGAGACCCACGTaGCCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGG +
Preference number: 3 (lower is better)
Translates to: LQQRDQVPARPT*PSPQALRWPPR
Trigger: CCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGGACCTGGTCCCTTTGTTGCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR CCA 72 bp CCTTTGGGCAAGAAGGGCTTCTGGGGCCTGGAGAGGTaGCGCGCCGACACCCCTGCAGCGCCAGAGCCGGGG +
Preference number: 3 (lower is better)
Translates to: PLGKKGFWGLER*RADTPAAPEPG
Trigger: CCCCGGCTCTGGCGCTGCAGGGGTGTCGGCGCGCCACCTCTCCAGGCCCCAGAAGCCCTTCTTGCCCAAAGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR CCA 72 bp GCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTaGGCTTGGAGGGGCCCTGGGAATGGGGACGAGGGC +
Preference number: 3 (lower is better)
Translates to: AGQHGPKLFGAS*AWRGPGNGDEG
Trigger: GCCCTCGTCCCCATTCCCAGGGCCCCTCCAAGCCCAGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR GCA 72 bp CTCCCGACACCACCCTGGCCGTGGCCAGCGTCCCACTaGCCTTTCTCCAAGCCGCCTGCAACAAAGGGACCA +
Preference number: 3 (lower is better)
Translates to: LPTPPWPWPASH*PFSKPPATKGP
Trigger: TGGTCCCTTTGTTGCAGGCGGCTTGGAGAAAGGGCAGTGGGACGCTGGCCACGGCCAGGGTGGTGTCGGGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR CCA 72 bp CTGGCCGGGAGCTGCAAAGACCTGCCACCCTCCTCATaGTTCCCCTGTCAGCACCCAGTGCCTGGCTCCAGG +
Preference number: 3 (lower is better)
Translates to: LAGSCKDLPPSS*FPCQHPVPGSR
Trigger: CCTGGAGCCAGGCACTGGGTGCTGACAGGGGAACCATGAGGAGGGTGGCAGGTCTTTGCAGCTCCCGGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CAA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGCTATACCACAGAGGTTaGTGTGCCCGGGGTGCCAGG +
Preference number: 3 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRLYHRG*CARGAR
Trigger: CCTGGCACCCCGGGCACACAAACCTCTGTGGTATAG...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CAA 90 bp TTTTGGCTTGAGTGGGACCCTCGCATCAACCCATCCCCAAGGGTCACGGGCAGATCCGGCCAGAGGGCCTaGGGGGCTGGTCAGCACGGG +
Preference number: 3 (lower is better)
Translates to: FWLEWDPRINPSPRVTGRSGQRA*GAGQHG
Trigger: CCCGTGCTGACCAGCCCCCAAGGCCCTCTGGCCGGA...TCTGCCCGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR TCA 72 bp CGCACTCCTGCACAGGGCCTGAGGTCCAGTGAATACTaGCGGATTTTGGGAGTGGGTGGGCGGCCCGGTGCC +
Preference number: 3 (lower is better)
Translates to: RTPAQGLRSSEY*RILGVGGRPGA
Trigger: GGCACCGGGCCGCCCACCCACTCCCAAAATCCGTCAGTATTCACTGGACCTCAGGCCCTGTGCAGGAGTGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR GCA 72 bp GAGCCTCCACTGGACCCAGGGTCTTGCCCCTGCTGCTaGATCACCTCGCTTCTCCTTCCATGGGTTCCCGGG +
Preference number: 3 (lower is better)
Translates to: EPPLDPGSCPCC*ITSLLLPWVPG
Trigger: CCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAGCAGCAGGGGCAAGACCCTGGGTCCAGTGGAGGCTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR GCA 72 bp GTGGCCAGCGTCCCACTGCCCTTTCTCCAAGCCGCCTaGAACAAAGGGACCAGGTCCCAGCGAGACCCACGT +
Preference number: 3 (lower is better)
Translates to: VASVPLPFLQAA*NKGTRSQRDPR
Trigger: ACGTGGGTCTCGCTGGGACCTGGTCCCTTTGTTGCAGGCGGCTTGGAGAAAGGGCAGTGGGACGCTGGCCAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR GCA 72 bp TGGGGTCACCCTGACTGTCCCAGCGCCAGTGAACAGTaGCACCCTGGCTCAAGGAGGGAGGGATCTGCACCC +
Preference number: 3 (lower is better)
Translates to: WGHPDCPSASEQ*HPGSRREGSAP
Trigger: GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAGGGTGACCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR CCA 72 bp CTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTaGGCAGTGGGGGCCAGAGGGGCCACCCGGAGCCTC +
Preference number: 3 (lower is better)
Translates to: LLGTDCPLKLWV*AVGARGATRSL
Trigger: GAGGCTCCGGGTGGCCCCTCTGGCCCCCACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR TCA 72 bp CCCGGATCGCACTCCTGCACAGGGCCTGAGGTCCAGTaGATACTGACGGATTTTGGGAGTGGGTGGGCGGCC +
Preference number: 3 (lower is better)
Translates to: PGSHSCTGPEVQ*ILTDFGSGWAA
Trigger: GGCCGCCCACCCACTCCCAAAATCCGTCAGTATTCACTGGACCTCAGGCCCTGTGCAGGAGTGCGATCCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR GCA 72 bp CACCCGGAGCCTCCACTGGACCCAGGGTCTTGCCCCTaGTGCTGCATCACCTCGCTTCTCCTTCCATGGGTT +
Preference number: 3 (lower is better)
Translates to: HPEPPLDPGSCP*CCITSLLLPWV
Trigger: AACCCATGGAAGGAGAAGCGAGGTGATGCAGCAGCAGGGGCAAGACCCTGGGTCCAGTGGAGGCTCCGGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR GCA 72 bp ATGAGGGCTCACTTCCGCCTCACCCTGGCCGGGAGCTaGAAAGACCTGCCACCCTCCTCATGGTTCCCCTGT +
Preference number: 3 (lower is better)
Translates to: MRAHFRLTLAGS*KDLPPSSWFPC
Trigger: ACAGGGGAACCATGAGGAGGGTGGCAGGTCTTTGCAGCTCCCGGCCAGGGTGAGGCGGAAGTGAGCCCTCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR GCA 72 bp ATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTaGCCACAGCCCGGGAGGCCATGCACACGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: ITYFHESPHRCG*PQPGRPCTRPG
Trigger: GCCTGGCCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CAA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCACTGGACCCAGGGTCTaGCCCCTGCTGCTGCATCAC +
Preference number: 3 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELTGPRV*PLLLHH
Trigger: GTGATGCAGCAGCAGGGGCAAGACCCTGGGTCCAGT...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR TCA 72 bp GTGCGGTACAGACTTTGTGTCATGTGGCTTAAGTGCTaGTGGGGCGGGGTGGCGTCAGGACGGCAGGAGCCC +
Preference number: 3 (lower is better)
Translates to: VRYRLCVMWLKC*WGGVASGRQEP
Trigger: GGGCTCCTGCCGTCCTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACCGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR TCA 72 bp CCACAGCCCGGGAGGCCATGCACACGGCCAGGCGCGTaGACATTTCCCGTGCGGTACAGACTTTGTGTCATG +
Preference number: 3 (lower is better)
Translates to: PQPGRPCTRPGA*TFPVRYRLCVM
Trigger: CATGACACAAAGTCTGTACCGCACGGGAAATGTTCACGCGCCTGGCCGTGTGCATGGCCTCCCGGGCTGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR TCA 72 bp AGCGGCCCAGCCCGGATCGCACTCCTGCACAGGGCCTaGGGTCCAGTGAATACTGACGGATTTTGGGAGTGG +
Preference number: 3 (lower is better)
Translates to: SGPARIALLHRA*GPVNTDGFWEW
Trigger: CCACTCCCAAAATCCGTCAGTATTCACTGGACCTCAGGCCCTGTGCAGGAGTGCGATCCGGGCTGGGCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR CAA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCTCAGAAGTCTCCACCTaGTTCAGCGAGGAAGGAGGG +
Preference number: 3 (lower is better)
Translates to: GAILGWDHHREGSARSLISEVST*FSEEGG
Trigger: CCCTCCTTCCTCGCTGAACAAGGTGGAGACTTCTGA...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR GCA 72 bp ATACTGACGGATTTTGGGAGTGGGTGGGCGGCCCGGTaGCCCCGAGTGGTGATGAACGGTAAACACACAGGG +
Preference number: 3 (lower is better)
Translates to: ILTDFGSGWAAR*PRVVMNGKHTG
Trigger: CCCTGTGTGTTTACCGTTCATCACCACTCGGGGGCACCGGGCCGCCCACCCACTCCCAAAATCCGTCAGTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR CCA 72 bp CAGAGCTGCGCAAAGGTCCCGGCTTTTTGGCTTGAGTaGGACCCTCGCATCAACCCATCCCCAAGGGTCACG +
Preference number: 3 (lower is better)
Translates to: QSCAKVPAFWLE*DPRINPSPRVT
Trigger: CGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAAAGCCGGGACCTTTGCGCAGCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR CAA 90 bp CAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACACCACACTGGACCCAGGGTCTaGCCCCTGCTGCTGCATCAC +
Preference number: 3 (lower is better)
Translates to: QRGRRESETSAHAYGTHHTGPRV*PLLLHH
Trigger: GTGATGCAGCAGCAGGGGCAAGACCCTGGGTCCAGT...GTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CAA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGACTGGACCCAGGGTCTaGCCCCTGCTGCTGCATCAC +
Preference number: 3 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVTGPRV*PLLLHH
Trigger: GTGATGCAGCAGCAGGGGCAAGACCCTGGGTCCAGT...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR TCA 72 bp TCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTGGCTTaGGTGGGACCCTCGCATCAACCCATCCCCAAGGGT +
Preference number: 3 (lower is better)
Translates to: STELRKGPGFLA*VGPSHQPIPKG
Trigger: ACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAAAGCCGGGACCTTTGCGCAGCTCTGTCGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR CCA 72 bp CAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTaGCTTGAGTGGGACCCTCGCATCAACCCATCCCCA +
Preference number: 3 (lower is better)
Translates to: QSRQSCAKVPAF*LEWDPRINPSP
Trigger: TGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR-3UTR CAA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGTCAAGCTTAAAACTCTaGCAGGAATGGAGGATAGGA +
Preference number: 3 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRSSLKL*QEWRIG
Trigger: TCCTATCCTCCATTCCTGCAAGAGTTTTAAGCTTGA...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR GCA 72 bp GGCCATGCACACGGCCAGGCGCGTGAACATTTCCCGTaGGGTACAGACTTTGTGTCATGTGGCTTAAGTGCT +
Preference number: 3 (lower is better)
Translates to: GHAHGQAREHFP*GTDFVSCGLSA
Trigger: AGCACTTAAGCCACATGACACAAAGTCTGTACCGCACGGGAAATGTTCACGCGCCTGGCCGTGTGCATGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR-3UTR CAA 90 bp CAGGTCCCTAGCCTGACTTGCTGGAACCTGAGACCCAGGGTCCAGTCCTCTGTCTCAAGCTTAAAACTCTaGCAGGAATGGAGGATAGGA +
Preference number: 3 (lower is better)
Translates to: QVPSLTCWNLRPRVQSSVSSLKL*QEWRIG
Trigger: TCCTATCCTCCATTCCTGCAAGAGTTTTAAGCTTGA...GACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR GCA 72 bp CCTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTaGCCATGCATACGGCACACACCACACATAGACACA +
Preference number: 3 (lower is better)
Translates to: PCSARKEGKRNI*PCIRHTPHIDT
Trigger: TGTGTCTATGTGTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR GCA 72 bp TCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATaGATACGGCACACACCACACATAGACACACACATA +
Preference number: 3 (lower is better)
Translates to: SARKEGKRNICP*IRHTPHIDTHI
Trigger: TATGTGTGTGTCTATGTGTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR TCA 72 bp GGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATaGATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCA +
Preference number: 3 (lower is better)
Translates to: GLPLPVTNISLS*IQEVAKGQKSP
Trigger: TGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR TCA 72 bp CTGATTCCTGTTTCTCTGAAACATTCAGGAATTAAGTaGCGAACGCAGAGAACTGTAAGCCGCCTTGGCCTC +
Preference number: 3 (lower is better)
Translates to: LIPVSLKHSGIK*RTQRTVSRLGL
Trigger: GAGGCCAAGGCGGCTTACAGTTCTCTGCGTTCGTCACTTAATTCCTGAATGTTTCAGAGAAACAGGAATCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR TCA 72 bp TCACAGGCTGAGGTGTATGGCTATGCTGCGAGTCTCTaGGATTCTTATTTGCTTAAAGGTTCATCTTTTCTC +
Preference number: 3 (lower is better)
Translates to: SQAEVYGYAASL*DSYLLKGSSFL
Trigger: GAGAAAAGATGAACCTTTAAGCAAATAAGAATCTCAGAGACTCGCAGCATAGCCATACACCTCAGCCTGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGGGCGGGAGCATGCAGTaGCGGAGCCCGGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGGGSMQ*RSPACH
Trigger: GTGGCAGGCCGGGCTCCGCCACTGCATGCTCCCGCC...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
78% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGGCTGATGGGGCGGGGTaGCGTCAGGACGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGADGAG*RQDGRS
Trigger: GCTCCTGCCGTCCTGACGCCACCCCGCCCCATCAGC...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGTCCAAGCCCAGCTCCTaGTCGCAGCCCCCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGSKPSS*SQPPLL
Trigger: GAGCAGCGGGGGCTGCGAGCAGGAGCTGGGCTTGGA...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGCACCCCAACTCAGGATaGCCGCAGGAGGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGHPNSG*PQEGRG
Trigger: CCCCCTGCCCTCCTGCGGCCATCCTGAGTTGGGGTG...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGGGTTGCGCTGCTGGGTaGACTTGCCCCCGCACAGCT +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGGCAAG*TCPRTA
Trigger: AGCTGTGCGGGGGCAAGTTCACCCAGCAGCGCAACC...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
74% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGGGGGGCGAGCCATGTTaGCTGTCGCTCAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGGGEPC*LSLSWA
Trigger: AGCCCAGCTGAGCGACAGCCAACATGGCTCGCCCCC...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
74% GC, longest homopolymer 9 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGAAAAGCACTCTCCCCTaGGGCAGCCGAGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGKSTLP*GSRGRA
Trigger: AGCCCTGCCTCGGCTGCCTCAGGGGAGAGTGCTTTT...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGGTCGCTCAGCTGGGCTaGGTCATCGGGAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGVAQLG*VIGSEV
Trigger: CACCTCACTCCCGATGACGCAGCCCAGCTGAGCGAC...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGGGGACCCTTGGGCCCTaGTTCTCTCCGCTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGGTLGP*FSPLKG
Trigger: CCCTTTGAGCGGAGAGAAGCAGGGCCCAAGGGTCCC...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
73% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCGGTCCGGCGGGAGCATaGAGTGGCGGAGCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: ERWAPRQWPGARTAQGSAGPAGA*SGGARP
Trigger: AGGCCGGGCTCCGCCACTGCATGCTCCCGCCGGACC...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCCCAGCGAGACCCACGTaGCCCAGCCCACAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: ERWAPRQWPGARTAQGSAPARPT*PSPQAL
Trigger: CAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGG...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCCGCTGGCATGGCCGCTaGCCCCCTCGCTCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFRWHGR*PPRSRS
Trigger: AGAGCGGGAGCGAGGGGGGCAGCGGCCATGCCAGCG...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGGGGTCTTGCCCCTGCTaGTGCATCACCTCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGGSCPC*CITSLL
Trigger: GAGAAGCGAGGTGATGCAGCAGCAGGGGCAAGACCC...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
72% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCGGCCGCACTGGGTGCTaGCAGGTCCTCGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFGRTGC*QVLGLL
Trigger: GAGGAGGCCGAGGACCTGTCAGCACCCAGTGCGGCC...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCACACGGCCAGCGGGGTaGGGCCTGCTCCCGACACCA +
Preference number: 4 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFTRPAG*GLLPTP
Trigger: TGGTGTCGGGAGCAGGCCTCACCCCGCTGGCCGTGT...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGCCCGGCTTTTTGGCTTaGGTGGGACCCTCGCATCAA +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGPGFLA*VGPSHQ
Trigger: TTGATGCGAGGGTCCCACTCAAGCCAAAAAGCCGGG...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGGTCCCTAGCCTGACTTaGTGGAACCTGAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGVPSLT*WNLRPR
Trigger: CCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGAC...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTTCCCGGGGAGCAAGGTaGCAGAGGGCGCCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: APRQWPGARTAQGSAIPVSRGAR*QRAPAG
Trigger: ACCCGCGGGCGCCCTCTGCCACCTTGCTCCCCGGGA...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGTCGCTTCTCCTTCCATaGGTTCCCGGGGAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGSLLLP*VPGEQG
Trigger: ACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGA...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGTGTCCATTAAAGCTCTaGGTGTGGGCAGTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGCPLKL*VWAVGA
Trigger: GGCCCCCACTGCCCACACCCAGAGCTTTAATGGACA...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCGGGGCCTGGGTGGGATaGGGAGGTAGACGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFGAWVG*GGRRAG
Trigger: CCCAGCCCGTCTACCTCCCCATCCCACCCAGGCCCC...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCCTCCCGACACCACCCTaGCCGTGGCCAGCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFLPTPP*PWPASH
Trigger: GTGGGACGCTGGCCACGGCCAGGGTGGTGTCGGGAG...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCGAGGGCCTTGGGGGCTaGTCAGCACGGGCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: ERWAPRQWPGARTAQGSAEGLGG*SARAQA
Trigger: AGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTC...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTCCGGCCAGAGGGCCTTaGGGGCTGGTCAGCACGGGC +
Preference number: 4 (lower is better)
Translates to: APRQWPGARTAQGSAIPVPARGP*GLVSTG
Trigger: GCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGCCGG...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGGGAACACTGTGGAGCTaGCCATGTCTGTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGGTLWS*PCLCPG
Trigger: ACCTGGACACAGACATGGTCAGCTCCACAGTGTTCC...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCGCTTGCCGGCTCGCTTaGGTTTGCGGCGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFACRLA*VCGGRG
Trigger: CCCTCTGCCGCCGCAAACTCAAGCGAGCCGGCAAGC...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp AGCAGCAGGGGGACCCAAGCCCAGACTCGGGTCCTGTGGCCAGAACTGACGGCCGGCCGCACTGGGTGCTaGCAGGTCCTCGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSRGTQAQTRVLWPELTAGRTGC*QVLGLL
Trigger: GAGGAGGCCGAGGACCTGTCAGCACCCAGTGCGGCC...GGCCGTCAGTTCTGGCCACAGGACCCGAGTCTGGGCTTGGGTCCCCCTGCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGGCGGCGGCAGAGGGCTaGCAACTCGGGCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRAAAEG*QLGQLE
Trigger: CTCCAGCTGCCCGAGTTGGCAGCCCTCTGCCGCCGC...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCGAGTCACCTCACAGATaGGGCTGCCCACAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: ERWAPRQWPGARTAQGSAESPHR*GCPQPG
Trigger: CCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTC...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp AGCAGCAGGGGGACCCAAGCCCAGACTCGGGTCCTGTGGCCAGAACTGACGGCCGGGTGGGCGGCCCGGTaGCCCCGAGTGGTGATGAAC +
Preference number: 4 (lower is better)
Translates to: SSRGTQAQTRVLWPELTAGWAAR*PRVVMN
Trigger: GTTCATCACCACTCGGGGGCACCGGGCCGCCCACCC...GGCCGTCAGTTCTGGCCACAGGACCCGAGTCTGGGCTTGGGTCCCCCTGCTGCT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCGCTGCTTCGAGTGGCTaGGCAGCTCCATGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: ERWAPRQWPGARTAQGSAAASSG*AAPCRA
Trigger: GGCCCGACATGGAGCTGCCCAGCCACTCGAAGCAGC...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCTCATCGGGAGTGAGGTaGGGACCTGGGGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: ERWAPRQWPGARTAQGSASSGVR*GPGVAG
Trigger: CCCTGCCACCCCAGGTCCCCACCTCACTCCCGATGA...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGCCCTCGAGGTGGATGTaGCCAAAGGCTCAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGPSRWM*PKAQRE
Trigger: TTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGG...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCCTCTTTGGTGCCAGCTaGGCTTGGAGGGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: ERWAPRQWPGARTAQGSALFGAS*AWRGPG
Trigger: CCCAGGGCCCCTCCAAGCCCAGCTGGCACCAAAGAG...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTTGGAGGAGCCCTTGCTaGGGCTCGGTCCGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: APRQWPGARTAQGSAIPVWRSPC*GSVRRE
Trigger: CTCCCGCCGGACCGAGCCCCAGCAAGGGCTCCTCCA...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCGATTTTGGGAGTGGGTaGGCGGCCCGGTGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFDFGSG*AARCPR
Trigger: TCGGGGGCACCGGGCCGCCCACCCACTCCCAAAATC...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTCGCAGACCGAACACTTaGAGGGCCGGGGCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: APRQWPGARTAQGSAIPVRRPNT*RAGAQP
Trigger: CGGCTGAGCCCCGGCCCTTCAAGTGTTCGGTCTGCG...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCGGTTGCGCTGCTGGGTaGACTTGCCCCCGCACAGCT +
Preference number: 4 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFGCAAG*TCPRTA
Trigger: AGCTGTGCGGGGGCAAGTTCACCCAGCAGCGCAACC...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCCATGTCCCCGCGCCCTaGCCACGCGCACCACCGGAG +
Preference number: 4 (lower is better)
Translates to: GAILGWDHHREGSARSLIHVPAP*PRAPPE
Trigger: CTCCGGTGGTGCGCGTGGGCAGGGCGCGGGGACATG...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGCGCACTGTCTTCACTTaGATCCTTGCCGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGRTVFT*ILAVLL
Trigger: GAGGAGAACGGCAAGGATGCAAGTGAAGACAGTGCG...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACCGCTGGCATGGCCGCTaGCCCCCTCGCTCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHRWHGR*PPRSRS
Trigger: AGAGCGGGAGCGAGGGGGGCAGCGGCCATGCCAGCG...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCCCACAGAGGTTTGTGTaGCCGGGGTGCCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFPQRFV*PGCQGP
Trigger: GGGACCCTGGCACCCCGGGCACACAAACCTCTGTGG...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCGACTGCTCAGGGAAGTaGCATCCCTGTTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: ERWAPRQWPGARTAQGSADCSGK*HPCSPG
Trigger: CCCCGGGGAACAGGGATGGCACTTCCCTGAGCAGTC...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCTCCTGGAGGAGCCCTTaGTGGGGCTCGGTCCGGCGG +
Preference number: 4 (lower is better)
Translates to: PSASEQCHPGSRREGSAPSWRSP*WGSVRR
Trigger: CCGCCGGACCGAGCCCCAGCAAGGGCTCCTCCAGGA...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACCTGCTCCCTGAGCCCTaGCCTCCGGCTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHLLPEP*PPAAQA
Trigger: GGCCTGGGCAGCCGGAGGGCAGGGCTCAGGGAGCAG...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCCCGGCCAGAGGGCCTTaGGGGCTGGTCAGCACGGGC +
Preference number: 4 (lower is better)
Translates to: GAILGWDHHREGSARSLIPARGP*GLVSTG
Trigger: GCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGCCGG...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGCACCCCAACTCAGGATaGCCGCAGGAGGGCAGGGGG +
Preference number: 4 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRHPNSG*PQEGRG
Trigger: CCCCCTGCCCTCCTGCGGCCATCCTGAGTTGGGGTG...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGGTCTGCTCTAAGGCCTaGCACCTTTGGCTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGVCSKA*HLWLLS
Trigger: GGACAAAAGCCAAAGGTGCCAGGCCTTAGAGCAGAC...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGGCTTGCCTGTGTAGATaGAGTCCAAGATCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGACLCR*SPRSAG
Trigger: TCCAGCAGATCTTGGACTTCATCTACACAGGCAAGC...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGCACCACTTGGGTCCCTaGACTCAGGCTCTGTTTTTA +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGHHLGP*TQALFL
Trigger: TAAAAACAGAGCCTGAGTTCAGGGACCCAAGTGGTG...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTTCCTGTGGCCAGAACTaGCGGCCATCCCCGCGTAGG +
Preference number: 4 (lower is better)
Translates to: APRQWPGARTAQGSAIPVSCGQN*RPSPRR
Trigger: CCTACGCGGGGATGGCCGTCAGTTCTGGCCACAGGA...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGGGGCGTGGGCCCCCTTaGGCCCATCCACGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LHHLASPSMGSRGARWQRGRGPP*AHPRAP
Trigger: AGGGGCTCGTGGATGGGCGCAAGGGGGCCCACGCCC...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCGGGCGTGGGCCCCCTTaGGCCCATCCACGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELGRGPP*AHPRAP
Trigger: AGGGGCTCGTGGATGGGCGCAAGGGGGCCCACGCCC...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCTCGGCACCCCCACTaGCTGTCTCGTAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: PSASEQCHPGSRREGSAPPRHPH*LSRRPP
Trigger: AGGGGGCCTACGAGACAGGCAGTGGGGGTGCCGAGG...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GCCAGAGGGCCTTGGGGGCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTGGGGACGCGCAGGAGTaGCAGCGGCCCCTGTTACAT +
Preference number: 4 (lower is better)
Translates to: ARGPWGLVSTGPSSLVPAGDAQE*QRPLLH
Trigger: ATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCC...AGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp GCCAGAGGGCCTTGGGGGCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTGGCCACTTGGCGCCCTaGTGGCTCCTGCACACGACT +
Preference number: 4 (lower is better)
Translates to: ARGPWGLVSTGPSSLVPAGHLAP*WLLHTT
Trigger: AGTCGTGTGCAGGAGCCAGCAGGGCGCCAAGTGGCC...AGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGACCCTGGCCGGGAGCTaGAAAGACCTGCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRTLAGS*KDLPPS
Trigger: GGAGGGTGGCAGGTCTTTGCAGCTCCCGGCCAGGGT...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGTTGGGCTCGGCTGGCTaGTCGCTGGGCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRLGSAG*SLGSSL
Trigger: CAAGCTGCTGCCCAGCGACCAGCCAGCCGAGCCCAA...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGCCCCCTCCAGATCCATaGGCTCATCAGGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRPPPDP*AHQGCP
Trigger: GGGGCACCCCTGATGAGCCCATGGATCTGGAGGGGG...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTGCGCCCGCGGGTCTTTaGCTTCTAGGAGGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: APRQWPGARTAQGSAIPVAPAGL*LLGGGG
Trigger: ACCTCCCCCTCCTAGAAGCCAAAGACCCGCGGGCGC...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGTCCCGGGGAGCAAGGTaGCAGAGGGCGCCCGCGGGT +
Preference number: 4 (lower is better)
Translates to: LHHLASPSMGSRGARWQRSRGAR*QRAPAG
Trigger: ACCCGCGGGCGCCCTCTGCCACCTTGCTCCCCGGGA...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCACGGGCTGGGACCCCTaGCTTCCCTCCTCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: PSASEQCHPGSRREGSAPTGWDP*LPSSRL
Trigger: GAGCCGAGAGGAGGGAAGCCAGGGGTCCCAGCCCGT...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCTGGGGCCTGGAGAGGTaGCGCGCCGACACCCCTGCA +
Preference number: 4 (lower is better)
Translates to: GAILGWDHHREGSARSLIWGLER*RADTPA
Trigger: TGCAGGGGTGTCGGCGCGCCACCTCTCCAGGCCCCA...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACTGGGCCCCGAGACAGTaGCCGGGGGCCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHWAPRQ*PGARTA
Trigger: AGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCA...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp GCCAGAGGGCCTTGGGGGCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTACCCTTCTCTGCCCGTaGGCCACTCCAGGGCCAACT +
Preference number: 4 (lower is better)
Translates to: ARGPWGLVSTGPSSLVPATLLCP*ATPGPT
Trigger: AGTTGGCCCTGGAGTGGCTCACGGGCAGAGAAGGGT...AGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCCTCTGCTGGTTCAGCTaGAGCAGGAGCTGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: ERWAPRQWPGARTAQGSALCWFS*SRSCFE
Trigger: CTCGAAGCAGCTCCTGCTGCAGCTGAACCAGCAGAG...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTGGGAAATAGGAGGACCTTGGTCCCTTTAGGGGGCATGCCAGGGCTGAGAGCCGGGCGTGGGCCCCCTTaGGCCCATCCACGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: LGNRRTLVPLGGMPGLRAGRGPP*AHPRAP
Trigger: AGGGGCTCGTGGATGGGCGCAAGGGGGCCCACGCCC...GGCTCTCAGCCCTGGCATGCCCCCTAAAGGGACCAAGGTCCTCCTATTTCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp AGCAGCAGGGGGACCCAAGCCCAGACTCGGGTCCTGTGGCCAGAACTGACGGCCGTCGCTCAGCTGGGCTaGGTCATCGGGAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: SSRGTQAQTRVLWPELTAVAQLG*VIGSEV
Trigger: CACCTCACTCCCGATGACGCAGCCCAGCTGAGCGAC...GGCCGTCAGTTCTGGCCACAGGACCCGAGTCTGGGCTTGGGTCCCCCTGCTGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACAGGCTCTTCCGAGGCTaGCCACCAGGCGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHRLFRG*PPGASS
Trigger: GCTGGAGGCGCCTGGTGGGCAGCCTCGGAAGAGCCT...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGCAGCGGGGTGAGGCCTaGTCCCGACACCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: LHHLASPSMGSRGARWQRQRGEA*SRHHPG
Trigger: GCCAGGGTGGTGTCGGGAGCAGGCCTCACCCCGCTG...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCGCCGGGGGCCAGGACTaGTCAGGGAAGTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: GAILGWDHHREGSARSLIAGGQD*SGKCHP
Trigger: GGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGC...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGCGTGAACATTTCCCGTaGGGTACAGACTTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGREHFP*GTDFVS
Trigger: TGACACAAAGTCTGTACCGCACGGGAAATGTTCACG...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CAGGAGTGGGGACCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTGGTCCGGCGGGAGCATaGAGTGGCGGAGCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: QEWGPTRVDRAAQRSRLFGPAGA*SGGARP
Trigger: AGGCCGGGCTCCGCCACTGCATGCTCCCGCCGGACC...AAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCCCACTCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCGGGTGGGCGGCCCGGTaGCCCCGAGTGGTGATGAAC +
Preference number: 4 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELGWAAR*PRVVMN
Trigger: GTTCATCACCACTCGGGGGCACCGGGCCGCCCACCC...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCTTGGGCTCGGCTGGCTaGTCGCTGGGCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PSASEQCHPGSRREGSAPLGSAG*SLGSSL
Trigger: CAAGCTGCTGCCCAGCGACCAGCCAGCCGAGCCCAA...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCACTCCTTCTTCCGAGTaGAGTGCCGGAGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: ERWAPRQWPGARTAQGSATPSSE*SAGGSS
Trigger: GGAAGAGCCTCCGGCACTCCACTCGGAAGAAGGAGT...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCACCCGGAGCCTCCACTaGACCCAGGGTCTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: PSASEQCHPGSRREGSAPTRSLH*TQGLAP
Trigger: AGGGGCAAGACCCTGGGTCCAGTGGAGGCTCCGGGT...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGTGGGGCCTGGAGAGGTaGCGCGCCGACACCCCTGCA +
Preference number: 4 (lower is better)
Translates to: LHHLASPSMGSRGARWQRWGLER*RADTPA
Trigger: TGCAGGGGTGTCGGCGCGCCACCTCTCCAGGCCCCA...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACAGGGCTTCTGGGGCCTaGAGAGGTGGCGCGCCGACA +
Preference number: 4 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHRASGA*RGGAPT
Trigger: TGTCGGCGCGCCACCTCTCCAGGCCCCAGAAGCCCT...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGCACTTGGCGCCCTGCTaGCTCCTGCACACGACTTCC +
Preference number: 4 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRHLAPC*LLHTTS
Trigger: GGAAGTCGTGTGCAGGAGCCAGCAGGGCGCCAAGTG...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTCACTTGGCGCCCTGCTaGCTCCTGCACACGACTTCC +
Preference number: 4 (lower is better)
Translates to: APRQWPGARTAQGSAIPVHLAPC*LLHTTS
Trigger: GGAAGTCGTGTGCAGGAGCCAGCAGGGCGCCAAGTG...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACAGGCACTGGGCCACTTaGCGCCCTGCTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHRHWAT*RPAGSC
Trigger: GCAGGAGCCAGCAGGGCGCCAAGTGGCCCAGTGCCT...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GCCAGAGGGCCTTGGGGGCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTACTTCCGCCTCACCCTaGCCGGGAGCTGCAAAGACC +
Preference number: 4 (lower is better)
Translates to: ARGPWGLVSTGPSSLVPATSASP*PGAAKT
Trigger: GGTCTTTGCAGCTCCCGGCCAGGGTGAGGCGGAAGT...AGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCATGAGGGGCGAGAGGTaGGCCCCGAGACAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: GAILGWDHHREGSARSLIMRGER*APRQWP
Trigger: CGGCCACTGTCTCGGGGCCCACCTCTCGCCCCTCAT...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGGCTGATGGGGCGGGGTaGCGTCAGGACGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: LHHLASPSMGSRGARWQRADGAG*RQDGRS
Trigger: GCTCCTGCCGTCCTGACGCCACCCCGCCCCATCAGC...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACGGCTTGGAGGGGCCCTaGGAATGGGGACGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHGLEGP*EWGRGL
Trigger: GAGCCCTCGTCCCCATTCCCAGGGCCCCTCCAAGCC...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCTCTTTGGTGCCAGCTaGGCTTGGAGGGGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PSASEQCHPGSRREGSAPLFGAS*AWRGPG
Trigger: CCCAGGGCCCCTCCAAGCCCAGCTGGCACCAAAGAG...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTTGGTCAGGACCAGCATaGTCCGGCCAGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: APRQWPGARTAQGSAIPVWSGPA*SGQRAL
Trigger: CAAGGCCCTCTGGCCGGACCATGCTGGTCCTGACCA...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGGGCGGGAGCATGCAGTaGCGGAGCCCGGCCTGCCAC +
Preference number: 4 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRGGSMQ*RSPACH
Trigger: GTGGCAGGCCGGGCTCCGCCACTGCATGCTCCCGCC...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGCGCAGACCGAACACTTaGAGGGCCGGGGCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: LHHLASPSMGSRGARWQRRRPNT*RAGAQP
Trigger: CGGCTGAGCCCCGGCCCTTCAAGTGTTCGGTCTGCG...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGGCCCGGCCCAGACCTTaGACGCTATCCTGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRARPRP*TLSWLE
Trigger: CTCTAACCAGGATAGCGTGCAAGGTCTGGGCCGGGC...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GCCAGAGGGCCTTGGGGGCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTTTCTTCCGAGTGGAGTaGCGGAGGCTCTTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: ARGPWGLVSTGPSSLVPAFFRVE*RRLFRG
Trigger: GCCTCGGAAGAGCCTCCGGCACTCCACTCGGAAGAA...AGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp GCCAGAGGGCCTTGGGGGCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTGGGTCTTGCCCCTGCTaGTGCATCACCTCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: ARGPWGLVSTGPSSLVPAGSCPC*CITSLL
Trigger: GAGAAGCGAGGTGATGCAGCAGCAGGGGCAAGACCC...AGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACCTGCAGAACCAGGGCTaGACGCGCCCGCACAGACAC +
Preference number: 4 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHLQNQG*TRPHRH
Trigger: GTGTCTGTGCGGGCGCGTGCAGCCCTGGTTCTGCAG...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTAAGGAGGGAGGGATCTaGACCCCCAGCACCTGTTCC +
Preference number: 4 (lower is better)
Translates to: APRQWPGARTAQGSAIPVKEGGI*TPSTCS
Trigger: GGAACAGGTGCTGGGGGTGCAGATCCCTCCCTCCTT...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGAGCGCCAGTGAACAGTaGCACCCTGGCTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRSASEQ*HPGSRR
Trigger: CCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCT...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCGGAGCTGCAAAGACCTaGCACCCTCCTCATGGTTCC +
Preference number: 4 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFGAAKT*HPPHGS
Trigger: GGAACCATGAGGAGGGTGGCAGGTCTTTGCAGCTCC...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCGCCGGGGGCCAGGACTaGTCAGGGAAGTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELAGGQD*SGKCHP
Trigger: GGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGC...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATGCCGGGGGCCAGGACTaGTCAGGGAAGTGCCATCCC +
Preference number: 4 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDAGGQD*SGKCHP
Trigger: GGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGC...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACGAGTCACCTCACAGATaGGGCTGCCCACAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHESPHR*GCPQPG
Trigger: CCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTC...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGGGTGTATGGCTATGCTaGGAGTCTCTGAGATTCTTA +
Preference number: 4 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGGVWLC*ESLRFL
Trigger: TAAGAATCTCAGAGACTCGCAGCATAGCCATACACC...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACGAAGTTGGGCTCGGCTaGCTGGTCGCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHEVGLG*LVAGQQ
Trigger: CTGCTGCCCAGCGACCAGCCAGCCGAGCCCAACTTC...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCGAAGTTGGGCTCGGCTaGCTGGTCGCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: GAILGWDHHREGSARSLIEVGLG*LVAGQQ
Trigger: CTGCTGCCCAGCGACCAGCCAGCCGAGCCCAACTTC...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCACTCCTTCTTCCGAGTaGAGTGCCGGAGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFTPSSE*SAGGSS
Trigger: GGAAGAGCCTCCGGCACTCCACTCGGAAGAAGGAGT...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CAGGAGTGGGGACCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTGGGGCCTGGGTGGGATaGGGAGGTAGACGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QEWGPTRVDRAAQRSRLFGAWVG*GGRRAG
Trigger: CCCAGCCCGTCTACCTCCCCATCCCACCCAGGCCCC...AAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCCCACTCCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGGGAAATAGGAGGACCTTGGTCCCTTTAGGGGGCATGCCAGGGCTGAGAGCCCTCCCGACACCACCCTaGCCGTGGCCAGCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: LGNRRTLVPLGGMPGLRALPTPP*PWPASH
Trigger: GTGGGACGCTGGCCACGGCCAGGGTGGTGTCGGGAG...GGCTCTCAGCCCTGGCATGCCCCCTAAAGGGACCAAGGTCCTCCTATTTCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGCTGCCACCCTCCTCATaGTTCCCCTGTCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRLPPSS*FPCQHP
Trigger: TGGGTGCTGACAGGGGAACCATGAGGAGGGTGGCAG...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCACTTCCGCCTCACCCTaGCCGGGAGCTGCAAAGACC +
Preference number: 4 (lower is better)
Translates to: PSASEQCHPGSRREGSAPTSASP*PGAAKT
Trigger: GGTCTTTGCAGCTCCCGGCCAGGGTGAGGCGGAAGT...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGGGAAATAGGAGGACCTTGGTCCCTTTAGGGGGCATGCCAGGGCTGAGAGCCTGGGCCCCGAGACAGTaGCCGGGGGCCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: LGNRRTLVPLGGMPGLRAWAPRQ*PGARTA
Trigger: AGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCA...GGCTCTCAGCCCTGGCATGCCCCCTAAAGGGACCAAGGTCCTCCTATTTCCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTACGCCGCTCACCACTTaGGTCCCTGAACTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: APRQWPGARTAQGSAIPVTPLTT*VPELRL
Trigger: GAGCCTGAGTTCAGGGACCCAAGTGGTGAGCGGCGT...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGGCTGATGGGGCGGGGTaGCGTCAGGACGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRADGAG*RQDGRS
Trigger: GCTCCTGCCGTCCTGACGCCACCCCGCCCCATCAGC...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTCCATCCACGAGCCCCTaGTACCGAGCTTGGATGACA +
Preference number: 4 (lower is better)
Translates to: APRQWPGARTAQGSAIPVPSTSP*YRAWMT
Trigger: TGTCATCCAAGCTCGGTATCAGGGGCTCGTGGATGG...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp GCCAGAGGGCCTTGGGGGCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTCCATCCACGAGCCCCTaGTACCGAGCTTGGATGACA +
Preference number: 4 (lower is better)
Translates to: ARGPWGLVSTGPSSLVPAPSTSP*YRAWMT
Trigger: TGTCATCCAAGCTCGGTATCAGGGGCTCGTGGATGG...AGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCGGCGGTACTGACGGGTaGAGCGCATGCCACACTCAT +
Preference number: 4 (lower is better)
Translates to: PSASEQCHPGSRREGSAPGGTDG*SACHTH
Trigger: ATGAGTGTGGCATGCGCTTCACCCGTCAGTACCGCC...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCATGTGGCTTAAGTGCTaGTGGGGCGGGGTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: PSASEQCHPGSRREGSAPMWLKC*WGGVAS
Trigger: TGACGCCACCCCGCCCCATCAGCACTTAAGCCACAT...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACACACGGCCAGGCGCGTaGACATTTCCCGTGCGGTAC +
Preference number: 4 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHTRPGA*TFPVRY
Trigger: GTACCGCACGGGAAATGTTCACGCGCCTGGCCGTGT...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTCCCGGCTTTTTGGCTTaGGTGGGACCCTCGCATCAA +
Preference number: 4 (lower is better)
Translates to: APRQWPGARTAQGSAIPVPGFLA*VGPSHQ
Trigger: TTGATGCGAGGGTCCCACTCAAGCCAAAAAGCCGGG...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCGGGGCATGCCAGGGCTaGGAGCCCTTGTCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: GAILGWDHHREGSARSLIGACQG*EPLSAL
Trigger: TAGAGCAGACAAGGGCTCTCAGCCCTGGCATGCCCC...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGCATGTCCCCGCGCCCTaGCCACGCGCACCACCGGAG +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQHVPAP*PRAPPE
Trigger: CTCCGGTGGTGCGCGTGGGCAGGGCGCGGGGACATG...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCGCCCGGCCCAGACCTTaGACGCTATCCTGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: PSASEQCHPGSRREGSAPARPRP*TLSWLE
Trigger: CTCTAACCAGGATAGCGTGCAAGGTCTGGGCCGGGC...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CAGGTCCCTAGCCTGACTTGCTGGAACCTGAGACCCAGGGTCCAGTCCTCTGTCTCCAAGCCCAGCTCCTaGTCGCAGCCCCCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: QVPSLTCWNLRPRVQSSVSKPSS*SQPPLL
Trigger: GAGCAGCGGGGGCTGCGAGCAGGAGCTGGGCTTGGA...GACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp AGCAGCAGGGGGACCCAAGCCCAGACTCGGGTCCTGTGGCCAGAACTGACGGCCCCACAGGCTCCTTCTTaGCCCACTCCTTCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: SSRGTQAQTRVLWPELTAPQAPS*PTPSSE
Trigger: CTCGGAAGAAGGAGTGGGGCAAGAAGGAGCCTGTGG...GGCCGTCAGTTCTGGCCACAGGACCCGAGTCTGGGCTTGGGTCCCCCTGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CACACACACACGCACGCACACACAAATGAAAACAAGAGTACCGACGGCCCCGGCCGCTGGCATGGCCGCTaGCCCCCTCGCTCCCGCTCT +
Preference number: 4 (lower is better)
Translates to: HTHTHAHTNENKSTDGPGRWHGR*PPRSRS
Trigger: AGAGCGGGAGCGAGGGGGGCAGCGGCCATGCCAGCG...GCCGGGGCCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGCGTGTGTGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCGGGTCTTGCCCCTGCTaGTGCATCACCTCGCTTCTC +
Preference number: 4 (lower is better)
Translates to: PSASEQCHPGSRREGSAPGSCPC*CITSLL
Trigger: GAGAAGCGAGGTGATGCAGCAGCAGGGGCAAGACCC...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCAGCGCCAGTGAACAGTaGCACCCTGGCTCAAGGAGG +
Preference number: 4 (lower is better)
Translates to: PSASEQCHPGSRREGSAPSASEQ*HPGSRR
Trigger: CCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCT...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp ACCAGGGCTGCACGCGCCCGCACAGACACAAGCACACGTGCACACACACAGACAGGGGACGCGCAGGAGTaGCAGCGGCCCCTGTTACAT +
Preference number: 4 (lower is better)
Translates to: TRAARARTDTSTRAHTQTGDAQE*QRPLLH
Trigger: ATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCC...TGTCTGTGTGTGTGCACGTGTGCTTGTGTCTGTGCGGGCGCGTGCAGCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATGGCCACTTGGCGCCCTaGTGGCTCCTGCACACGACT +
Preference number: 4 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDGHLAP*WLLHTT
Trigger: AGTCGTGTGCAGGAGCCAGCAGGGCGCCAAGTGGCC...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp ACCAGGGCTGCACGCGCCCGCACAGACACAAGCACACGTGCACACACACAGACACCACAGAGGTTTGTGTaGCCGGGGTGCCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: TRAARARTDTSTRAHTQTPQRFV*PGCQGP
Trigger: GGGACCCTGGCACCCCGGGCACACAAACCTCTGTGG...TGTCTGTGTGTGTGCACGTGTGCTTGTGTCTGTGCGGGCGCGTGCAGCCCTGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGGAGTCACCTCACAGATaGGGCTGCCCACAGCCCGGG +
Preference number: 4 (lower is better)
Translates to: LHHLASPSMGSRGARWQRESPHR*GCPQPG
Trigger: CCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTC...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGCTGCTCCCTGAGCCCTaGCCTCCGGCTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQLLPEP*PPAAQA
Trigger: GGCCTGGGCAGCCGGAGGGCAGGGCTCAGGGAGCAG...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCGCTAGGACGTTCTTGTaGGCCCGGAAGATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFARTFL*ARKMEF
Trigger: GAACTCCATCTTCCGGGCCCACAAGAACGTCCTAGC...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCCGGCTGGCTGGTCGCTaGGCAGCAGCTTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELRLAGR*AAACLC
Trigger: ACACAGGCAAGCTGCTGCCCAGCGACCAGCCAGCCG...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GCCAGAGGGCCTTGGGGGCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTTGTCCATTAAAGCTCTaGGTGTGGGCAGTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: ARGPWGLVSTGPSSLVPACPLKL*VWAVGA
Trigger: GGCCCCCACTGCCCACACCCAGAGCTTTAATGGACA...AGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CAGGAGTGGGGACCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTACGGGCTGGGACCCCTaGCTTCCCTCCTCTCGGCTC +
Preference number: 4 (lower is better)
Translates to: QEWGPTRVDRAAQRSRLFTGWDP*LPSSRL
Trigger: GAGCCGAGAGGAGGGAAGCCAGGGGTCCCAGCCCGT...AAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCCCACTCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCGGCAAGAAGGGCTTCTaGGGCCTGGAGAGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELGKKGF*GLERWR
Trigger: GCGCCACCTCTCCAGGCCCCAGAAGCCCTTCTTGCC...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGGGAAATAGGAGGACCTTGGTCCCTTTAGGGGGCATGCCAGGGCTGAGAGCCGGCTTGGAGGGGCCCTaGGAATGGGGACGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: LGNRRTLVPLGGMPGLRAGLEGP*EWGRGL
Trigger: GAGCCCTCGTCCCCATTCCCAGGGCCCCTCCAAGCC...GGCTCTCAGCCCTGGCATGCCCCCTAAAGGGACCAAGGTCCTCCTATTTCCCAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CAGGTCCCTAGCCTGACTTGCTGGAACCTGAGACCCAGGGTCCAGTCCTCTGTCGAGGGCCTTGGGGGCTaGTCAGCACGGGCCCAAGCT +
Preference number: 4 (lower is better)
Translates to: QVPSLTCWNLRPRVQSSVEGLGG*SARAQA
Trigger: AGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTC...GACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGAATACTGACGGATTTTaGGAGTGGGTGGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRNTDGF*EWVGGP
Trigger: CGGGCCGCCCACCCACTCCCAAAATCCGTCAGTATT...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTAAGGCCTGGCACCTTTaGCTTTTGTCCCCCACGCCT +
Preference number: 4 (lower is better)
Translates to: APRQWPGARTAQGSAIPVKAWHL*LLSPTP
Trigger: AGGCGTGGGGGACAAAAGCCAAAGGTGCCAGGCCTT...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp AGCAGCAGGGGGACCCAAGCCCAGACTCGGGTCCTGTGGCCAGAACTGACGGCCAAGGCCTGGCACCTTTaGCTTTTGTCCCCCACGCCT +
Preference number: 4 (lower is better)
Translates to: SSRGTQAQTRVLWPELTAKAWHL*LLSPTP
Trigger: AGGCGTGGGGGACAAAAGCCAAAGGTGCCAGGCCTT...GGCCGTCAGTTCTGGCCACAGGACCCGAGTCTGGGCTTGGGTCCCCCTGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR CAA 72 bp GCCCTTGTCTGCTCTAAGGCCTGGCACCTTTGGCTTTaGTCCCCCACGCCTGGGGGTGGACGGATGCAGCCT +
Preference number: 4 (lower is better)
Translates to: ALVCSKAWHLWL*SPTPGGGRMQP
Trigger: AGGCTGCATCCGTCCACCCCCAGGCGTGGGGGACAAAAGCCAAAGGTGCCAGGCCTTAGAGCAGACAAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp TTTTGGCTTGAGTGGGACCCTCGCATCAACCCATCCCCAAGGGTCACGGGCAGACGCAGACCGAACACTTaGAGGGCCGGGGCTCAGCCG +
Preference number: 4 (lower is better)
Translates to: FWLEWDPRINPSPRVTGRRRPNT*RAGAQP
Trigger: CGGCTGAGCCCCGGCCCTTCAAGTGTTCGGTCTGCG...TCTGCCCGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp AGCAGCAGGGGGACCCAAGCCCAGACTCGGGTCCTGTGGCCAGAACTGACGGCCTGGTGCCGCGCTGCGTaGACATTTTGCCACAGATGT +
Preference number: 4 (lower is better)
Translates to: SSRGTQAQTRVLWPELTAWCRAA*TFCHRC
Trigger: ACATCTGTGGCAAAATGTTCACGCAGCGCGGCACCA...GGCCGTCAGTTCTGGCCACAGGACCCGAGTCTGGGCTTGGGTCCCCCTGCTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGCCAGCGAGACCCACGTaGCCCAGCCCACAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQPARPT*PSPQAL
Trigger: CAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGG...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CACACACACACGCACGCACACACAAATGAAAACAAGAGTACCGACGGCCCCGGCCCAGCGAGACCCACGTaGCCCAGCCCACAGGCCCTG +
Preference number: 4 (lower is better)
Translates to: HTHTHAHTNENKSTDGPGPARPT*PSPQAL
Trigger: CAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGG...GCCGGGGCCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGCGTGTGTGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CTGCCTGAGGTGGGGAAAGTTGGTGAGGGTCCGGATCGTTCATTTCACAGGCTGACACGGCCAGCGGGGTaGGGCCTGCTCCCGACACCA +
Preference number: 4 (lower is better)
Translates to: LPEVGKVGEGPDRSFHRLTRPAG*GLLPTP
Trigger: TGGTGTCGGGAGCAGGCCTCACCCCGCTGGCCGTGT...CAGCCTGTGAAATGAACGATCCGGACCCTCACCAACTTTCCCCACCTCAGGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp CACACACACACGCACGCACACACAAATGAAAACAAGAGTACCGACGGCCCCGGCACACGGCCAGCGGGGTaGGGCCTGCTCCCGACACCA +
Preference number: 4 (lower is better)
Translates to: HTHTHAHTNENKSTDGPGTRPAG*GLLPTP
Trigger: TGGTGTCGGGAGCAGGCCTCACCCCGCTGGCCGTGT...GCCGGGGCCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGCGTGTGTGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CAGGTCCCTAGCCTGACTTGCTGGAACCTGAGACCCAGGGTCCAGTCCTCTGTCCTGTCCCAGCGCCAGTaGACAGTGCCACCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: QVPSLTCWNLRPRVQSSVLSQRQ*TVPPWL
Trigger: GAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAG...GACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCAGGAGCCCCCTCACTaGGTATGGGTGAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: PSASEQCHPGSRREGSAPQEPPH*VWVKSM
Trigger: CATGGACTTCACCCATACTCAGTGAGGGGGCTCCTG...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACTCGCACAAACGTCGTTaGGTGAGGGGCCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHSHKRR*VRGLCS
Trigger: GGAGCAGAGGCCCCTCACTCAACGACGTTTGTGCGA...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACTTCTTCCGAGTGGAGTaGCGGAGGCTCTTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHFFRVE*RRLFRG
Trigger: GCCTCGGAAGAGCCTCCGGCACTCCACTCGGAAGAA...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCACAGGCTCCTTCTTaGCCCACTCCTTCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: PSASEQCHPGSRREGSAPPQAPS*PTPSSE
Trigger: CTCGGAAGAAGGAGTGGGGCAAGAAGGAGCCTGTGG...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATGGGACCCTTGGGCCCTaGTTCTCTCCGCTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDGTLGP*FSPLKG
Trigger: CCCTTTGAGCGGAGAGAAGCAGGGCCCAAGGGTCCC...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTGTCATGGTGCCGCGCTaGGTGAACATTTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: APRQWPGARTAQGSAIPVVMVPR*VNILPQ
Trigger: CTGTGGCAAAATGTTCACGCAGCGCGGCACCATGAC...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACCCAGGGTCTTGCCCCTaGTGCTGCATCACCTCGCTT +
Preference number: 4 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHPGSCP*CCITSL
Trigger: AAGCGAGGTGATGCAGCAGCAGGGGCAAGACCCTGG...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGGGCCACTTGGCGCCCTaGTGGCTCCTGCACACGACT +
Preference number: 4 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRGHLAP*WLLHTT
Trigger: AGTCGTGTGCAGGAGCCAGCAGGGCGCCAAGTGGCC...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CAGGAGTGGGGACCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTTTTGTGTGCCCGGGGTaGCAGGGTCCCCTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: QEWGPTRVDRAAQRSRLFFVCPG*QGPLEV
Trigger: CACCTCGAGGGGACCCTGGCACCCCGGGCACACAAA...AAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCCCACTCCTG
63% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CTGGGAAATAGGAGGACCTTGGTCCCTTTAGGGGGCATGCCAGGGCTGAGAGCCCCACAGAGGTTTGTGTaGCCGGGGTGCCAGGGTCCC +
Preference number: 4 (lower is better)
Translates to: LGNRRTLVPLGGMPGLRAPQRFV*PGCQGP
Trigger: GGGACCCTGGCACCCCGGGCACACAAACCTCTGTGG...GGCTCTCAGCCCTGGCATGCCCCCTAAAGGGACCAAGGTCCTCCTATTTCCCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGTCCTGGAGGAGCCCTTaGTGGGGCTCGGTCCGGCGG +
Preference number: 4 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVSWRSP*WGSVRR
Trigger: CCGCCGGACCGAGCCCCAGCAAGGGCTCCTCCAGGA...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCGTAAACACACAGGGCTaGCTGAGGTGGGGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFVNTQG*LRWGKL
Trigger: CAACTTTCCCCACCTCAGGCAGCCCTGTGTGTTTAC...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGGGAAATAGGAGGACCTTGGTCCCTTTAGGGGGCATGCCAGGGCTGAGAGCCCCCCCTCCAGATCCATaGGCTCATCAGGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: LGNRRTLVPLGGMPGLRAPPPDP*AHQGCP
Trigger: GGGGCACCCCTGATGAGCCCATGGATCTGGAGGGGG...GGCTCTCAGCCCTGGCATGCCCCCTAAAGGGACCAAGGTCCTCCTATTTCCCAG
63% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCTGTCCATTAAAGCTCTaGGTGTGGGCAGTGGGGGCC +
Preference number: 4 (lower is better)
Translates to: PSASEQCHPGSRREGSAPCPLKL*VWAVGA
Trigger: GGCCCCCACTGCCCACACCCAGAGCTTTAATGGACA...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACACCACTGGGGCCTGGAGAGGTaGCGCGCCGACACCCCTGCA +
Preference number: 4 (lower is better)
Translates to: QRGRRESETSAHAYGTHHWGLER*RADTPA
Trigger: TGCAGGGGTGTCGGCGCGCCACCTCTCCAGGCCCCA...GTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp TTTTGGCTTGAGTGGGACCCTCGCATCAACCCATCCCCAAGGGTCACGGGCAGAAGGGCTTCTGGGGCCTaGAGAGGTGGCGCGCCGACA +
Preference number: 4 (lower is better)
Translates to: FWLEWDPRINPSPRVTGRRASGA*RGGAPT
Trigger: TGTCGGCGCGCCACCTCTCCAGGCCCCAGAAGCCCT...TCTGCCCGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGCCCTCGAGGTGGATGTaGCCAAAGGCTCAAAGGGAA +
Preference number: 4 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRPSRWM*PKAQRE
Trigger: TTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGG...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGGGGGCCATCTTAGGCTaGGATCACCACAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: LHHLASPSMGSRGARWQRGAILG*DHHREG
Trigger: GCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCGGGTGCATCAATGCCTaGTCACCTCGTGTGCGTCGG +
Preference number: 4 (lower is better)
Translates to: GAILGWDHHREGSARSLIGCINA*SPRVRR
Trigger: CCGACGCACACGAGGTGACCAGGCATTGATGCACCC...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407464.7
CDS-3UTR CCA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGTGGTCAGGACCAGCATaGTCCGGCCAGAGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LHHLASPSMGSRGARWQRWSGPA*SGQRAL
Trigger: CAAGGCCCTCTGGCCGGACCATGCTGGTCCTGACCA...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCGCTTTTTGGCTTGAGTaGGACCCTCGCATCAACCCA +
Preference number: 4 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFAFWLE*DPRINP
Trigger: TGGGTTGATGCGAGGGTCCCACTCAAGCCAAAAAGC...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp CACACACACACGCACGCACACACAAATGAAAACAAGAGTACCGACGGCCCCGGCGCTTGCCGGCTCGCTTaGGTTTGCGGCGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: HTHTHAHTNENKSTDGPGACRLA*VCGGRG
Trigger: CCCTCTGCCGCCGCAAACTCAAGCGAGCCGGCAAGC...GCCGGGGCCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGCGTGTGTGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGGCTTGCCGGCTCGCTTaGGTTTGCGGCGGCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQACRLA*VCGGRG
Trigger: CCCTCTGCCGCCGCAAACTCAAGCGAGCCGGCAAGC...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGAAAGAGTTCATCGTCTaGGCCTTTGGCTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRKEFIV*AFGLGE
Trigger: CTCCCCCAAGCCAAAGGCTCAGACGATGAACTCTTT...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCGCACGCACACACAAATaGAAACAAGAGTACCGACGG +
Preference number: 4 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFARTHK*KQEYRR
Trigger: CCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGC...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGGGGAAAACCCACAGGTaGGCTGCAGGCACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRGKTHR*AAGTGP
Trigger: TGGCCCAGTGCCTGCAGCTCACCTGTGGGTTTTCCC...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCATAGGAGTGGCAGGATaGGGGCTCACTTCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: GAILGWDHHREGSARSLIIGVAG*GLTSAS
Trigger: TGAGGCGGAAGTGAGCCCTCATCCTGCCACTCCTAT...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGGGACGAGGGCTCAGGTaGCTCCAGGGAGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRGRGLR*LQGGFQ
Trigger: TTGGAAGCCTCCCTGGAGTCACCTGAGCCCTCGTCC...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGTCCAAGCCCAGCTCCTaGTCGCAGCCCCCGCTGCTC +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQSKPSS*SQPPLL
Trigger: GAGCAGCGGGGGCTGCGAGCAGGAGCTGGGCTTGGA...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CAGGTCCCTAGCCTGACTTGCTGGAACCTGAGACCCAGGGTCCAGTCCTCTGTCGGGACCCTTGGGCCCTaGTTCTCTCCGCTCAAAGGG +
Preference number: 4 (lower is better)
Translates to: QVPSLTCWNLRPRVQSSVGTLGP*FSPLKG
Trigger: CCCTTTGAGCGGAGAGAAGCAGGGCCCAAGGGTCCC...GACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GCCAGAGGGCCTTGGGGGCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTCGCACTGTCTTCACTTaGATCCTTGCCGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: ARGPWGLVSTGPSSLVPARTVFT*ILAVLL
Trigger: GAGGAGAACGGCAAGGATGCAAGTGAAGACAGTGCG...AGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp AGCAGCAGGGGGACCCAAGCCCAGACTCGGGTCCTGTGGCCAGAACTGACGGCCCGCACTGTCTTCACTTaGATCCTTGCCGTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: SSRGTQAQTRVLWPELTARTVFT*ILAVLL
Trigger: GAGGAGAACGGCAAGGATGCAAGTGAAGACAGTGCG...GGCCGTCAGTTCTGGCCACAGGACCCGAGTCTGGGCTTGGGTCCCCCTGCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGCCTTGGCGCAGGGAATaGACACATACAAGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRPWRRE*THTSCP
Trigger: GGGACAACTTGTATGTGTGCATTCCCTGCGCCAAGG...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CACACACACACGCACGCACACACAAATGAAAACAAGAGTACCGACGGCCCCGGCCCTCGGCACCCCCACTaGCTGTCTCGTAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: HTHTHAHTNENKSTDGPGPRHPH*LSRRPP
Trigger: AGGGGGCCTACGAGACAGGCAGTGGGGGTGCCGAGG...GCCGGGGCCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGCGTGTGTGTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACACCACCCTCGGCACCCCCACTaGCTGTCTCGTAGGCCCCCT +
Preference number: 4 (lower is better)
Translates to: QRGRRESETSAHAYGTHHPRHPH*LSRRPP
Trigger: AGGGGGCCTACGAGACAGGCAGTGGGGGTGCCGAGG...GTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CAGGTCCCTAGCCTGACTTGCTGGAACCTGAGACCCAGGGTCCAGTCCTCTGTCGACTGCTCAGGGAAGTaGCATCCCTGTTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: QVPSLTCWNLRPRVQSSVDCSGK*HPCSPG
Trigger: CCCCGGGGAACAGGGATGGCACTTCCCTGAGCAGTC...GACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GCCAGAGGGCCTTGGGGGCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTGTAAACACACAGGGCTaGCTGAGGTGGGGAAAGTTG +
Preference number: 4 (lower is better)
Translates to: ARGPWGLVSTGPSSLVPAVNTQG*LRWGKL
Trigger: CAACTTTCCCCACCTCAGGCAGCCCTGTGTGTTTAC...AGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp TTTTGGCTTGAGTGGGACCCTCGCATCAACCCATCCCCAAGGGTCACGGGCAGAGCTGCTTCGAGTGGCTaGGCAGCTCCATGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: FWLEWDPRINPSPRVTGRAASSG*AAPCRA
Trigger: GGCCCGACATGGAGCTGCCCAGCCACTCGAAGCAGC...TCTGCCCGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCCCTTGCACGCTATCCTaGTTAGAGCCACCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFPCTLS*LEPPRK
Trigger: CTTTCTTGGTGGCTCTAACCAGGATAGCGTGCAAGG...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATGGCAGGGGGCAAGGGTaGGCTTTTCTTGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDGRGQG*AFLGQV
Trigger: GACCTGTCCAAGAAAAGCCCACCCTTGCCCCCTGCC...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGTGGCTGTCGCTCAGCTaGGCTGCGTCATCGGGAGTG +
Preference number: 4 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRWLSLS*AASSGV
Trigger: CACTCCCGATGACGCAGCCCAGCTGAGCGACAGCCA...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATGTGTGCATGCGCAGGTaGCTGATGAGGTTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDVCMRR*LMRLRC
Trigger: GCAGCGCAACCTCATCAGCCACCTGCGCATGCACAC...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGAGGCACTGGGCCACTTaGCGCCCTGCTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQRHWAT*RPAGSC
Trigger: GCAGGAGCCAGCAGGGCGCCAAGTGGCCCAGTGCCT...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACACCACAGGCACTGGGCCACTTaGCGCCCTGCTGGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: QRGRRESETSAHAYGTHHRHWAT*RPAGSC
Trigger: GCAGGAGCCAGCAGGGCGCCAAGTGGCCCAGTGCCT...GTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp ACCAGGGCTGCACGCGCCCGCACAGACACAAGCACACGTGCACACACACAGACAACGCCGCTCACCACTTaGGTCCCTGAACTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: TRAARARTDTSTRAHTQTTPLTT*VPELRL
Trigger: GAGCCTGAGTTCAGGGACCCAAGTGGTGAGCGGCGT...TGTCTGTGTGTGTGCACGTGTGCTTGTGTCTGTGCGGGCGCGTGCAGCCCTGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGCAGGGGAGGGTTCCCTaGACTGGCCTTACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LHHLASPSMGSRGARWQRQGRVP*TGLTAA
Trigger: AGCAGCTGTAAGGCCAGTCCAGGGAACCCTCCCCTG...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGCAGACTCGGGTCCTGTaGCCAGAACTGACGGCCATC +
Preference number: 4 (lower is better)
Translates to: LHHLASPSMGSRGARWQRQTRVL*PELTAI
Trigger: GATGGCCGTCAGTTCTGGCCACAGGACCCGAGTCTG...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCCAGGGCTGCCTGAGGTaGGGAAAGTTGGTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELQGCLR*GKLVRV
Trigger: GACCCTCACCAACTTTCCCCACCTCAGGCAGCCCTG...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATGCAGGACCAGGGACTTaGAATAGATGCTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDAGPGT*NRCCWR
Trigger: CCGCCAGCAGCATCTATTTCAAGTCCCTGGTCCTGC...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGAGCTCTTCCTCCGTGTaGGTCTCCACGTGCGCATTG +
Preference number: 4 (lower is better)
Translates to: LHHLASPSMGSRGARWQRSSSSV*VSTCAL
Trigger: CAATGCGCACGTGGAGACTCACACGGAGGAAGAGCT...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCCTCACTGAGTATGGGTaGAGTCCATGGGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: GAILGWDHHREGSARSLILTEYG*SPWVSS
Trigger: GGAGGAGACCCATGGACTTCACCCATACTCAGTGAG...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGCAGGAGCCCCCTCACTaGGTATGGGTGAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: LHHLASPSMGSRGARWQRQEPPH*VWVKSM
Trigger: CATGGACTTCACCCATACTCAGTGAGGGGGCTCCTG...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp ACCAGGGCTGCACGCGCCCGCACAGACACAAGCACACGTGCACACACACAGACACAGGAGCCCCCTCACTaGGTATGGGTGAAGTCCATG +
Preference number: 4 (lower is better)
Translates to: TRAARARTDTSTRAHTQTQEPPH*VWVKSM
Trigger: CATGGACTTCACCCATACTCAGTGAGGGGGCTCCTG...TGTCTGTGTGTGTGCACGTGTGCTTGTGTCTGTGCGGGCGCGTGCAGCCCTGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGATGTGGCTTAAGTGCTaGTGGGGCGGGGTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRMWLKC*WGGVAS
Trigger: TGACGCCACCCCGCCCCATCAGCACTTAAGCCACAT...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGTCTGCTCCCAGTCCCTaGAGTTCTGCAAAGGAATCA +
Preference number: 4 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRSAPSP*SSAKES
Trigger: TGATTCCTTTGCAGAACTTCAGGGACTGGGAGCAGA...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGACAAACGTCGTTGAGTaGGGGGCCTCTGCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: LHHLASPSMGSRGARWQRTNVVE*GASAPS
Trigger: ACTGGGAGCAGAGGCCCCTCACTCAACGACGTTTGT...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CTGGGAAATAGGAGGACCTTGGTCCCTTTAGGGGGCATGCCAGGGCTGAGAGCCTCGCACAAACGTCGTTaGGTGAGGGGCCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LGNRRTLVPLGGMPGLRASHKRR*VRGLCS
Trigger: GGAGCAGAGGCCCCTCACTCAACGACGTTTGTGCGA...GGCTCTCAGCCCTGGCATGCCCCCTAAAGGGACCAAGGTCCTCCTATTTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp TTTTGGCTTGAGTGGGACCCTCGCATCAACCCATCCCCAAGGGTCACGGGCAGAACCCTTCTCTGCCCGTaGGCCACTCCAGGGCCAACT +
Preference number: 4 (lower is better)
Translates to: FWLEWDPRINPSPRVTGRTLLCP*ATPGPT
Trigger: AGTTGGCCCTGGAGTGGCTCACGGGCAGAGAAGGGT...TCTGCCCGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGTTCTTCCGAGTGGAGTaGCGGAGGCTCTTCCGAGGC +
Preference number: 4 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRFFRVE*RRLFRG
Trigger: GCCTCGGAAGAGCCTCCGGCACTCCACTCGGAAGAA...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACTTTCTCCAAGCCGCCTaGAACAAAGGGACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHFLQAA*NKGTRS
Trigger: GGACCTGGTCCCTTTGTTGCAGGCGGCTTGGAGAAA...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGCAGCGGGGTGAGGCCTaGTCCCGACACCACCCTGGC +
Preference number: 4 (lower is better)
Translates to: CKGITYFHESPHRCGCPQQRGEA*SRHHPG
Trigger: GCCAGGGTGGTGTCGGGAGCAGGCCTCACCCCGCTG...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTGGAAAGCGAAACATCTaGCCATGCATACGGCACACA +
Preference number: 4 (lower is better)
Translates to: APRQWPGARTAQGSAIPVGKRNI*PCIRHT
Trigger: TGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCC...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGGGAAAGCGAAACATCTaGCCATGCATACGGCACACA +
Preference number: 4 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRGKRNI*PCIRHT
Trigger: TGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCC...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTGTCAAGGGCTTCCACTaGCAGTCACCAACATATCGT +
Preference number: 4 (lower is better)
Translates to: APRQWPGARTAQGSAIPVVKGFH*QSPTYR
Trigger: ACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGAC...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGTTTGTGTGCCCGGGGTaGCAGGGTCCCCTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVFVCPG*QGPLEV
Trigger: CACCTCGAGGGGACCCTGGCACCCCGGGCACACAAA...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGACCCTGGCCGGGAGCTaGAAAGACCTGCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVTLAGS*KDLPPS
Trigger: GGAGGGTGGCAGGTCTTTGCAGCTCCCGGCCAGGGT...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTGCCTGAGGTGGGGAAAGTTGGTGAGGGTCCGGATCGTTCATTTCACAGGCTGCCCGGATCGCACTCCTaGACAGGGCCTGAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: LPEVGKVGEGPDRSFHRLPGSHS*TGPEVQ
Trigger: CTGGACCTCAGGCCCTGTGCAGGAGTGCGATCCGGG...CAGCCTGTGAAATGAACGATCCGGACCCTCACCAACTTTCCCCACCTCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCCCTGGGGATCCTCCCTaGCCCAGTGAGGTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELPGDPP*PSEVCY
Trigger: ATAACAGACCTCACTGGGGCAGGGAGGATCCCCAGG...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGCGGCTGGCTGGTCGCTaGGCAGCAGCTTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQRLAGR*AAACLC
Trigger: ACACAGGCAAGCTGCTGCCCAGCGACCAGCCAGCCG...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGTTGGGCTCGGCTGGCTaGTCGCTGGGCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVLGSAG*SLGSSL
Trigger: CAAGCTGCTGCCCAGCGACCAGCCAGCCGAGCCCAA...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGGGAAATAGGAGGACCTTGGTCCCTTTAGGGGGCATGCCAGGGCTGAGAGCCGGCAGGGGGCAAGGGTaGGCTTTTCTTGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: LGNRRTLVPLGGMPGLRAGRGQG*AFLGQV
Trigger: GACCTGTCCAAGAAAAGCCCACCCTTGCCCCCTGCC...GGCTCTCAGCCCTGGCATGCCCCCTAAAGGGACCAAGGTCCTCCTATTTCCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGTCATCGGGAGTGAGGTaGGGACCTGGGGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQSSGVR*GPGVAG
Trigger: CCCTGCCACCCCAGGTCCCCACCTCACTCCCGATGA...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGCCTGAGGTGGGGAAAGTTGGTGAGGGTCCGGATCGTTCATTTCACAGGCTGTCATCGGGAGTGAGGTaGGGACCTGGGGTGGCAGGG +
Preference number: 4 (lower is better)
Translates to: LPEVGKVGEGPDRSFHRLSSGVR*GPGVAG
Trigger: CCCTGCCACCCCAGGTCCCCACCTCACTCCCGATGA...CAGCCTGTGAAATGAACGATCCGGACCCTCACCAACTTTCCCCACCTCAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp TTTTGGCTTGAGTGGGACCCTCGCATCAACCCATCCCCAAGGGTCACGGGCAGATGGCTGTCGCTCAGCTaGGCTGCGTCATCGGGAGTG +
Preference number: 4 (lower is better)
Translates to: FWLEWDPRINPSPRVTGRWLSLS*AASSGV
Trigger: CACTCCCGATGACGCAGCCCAGCTGAGCGACAGCCA...TCTGCCCGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CACACACACACGCACGCACACACAAATGAAAACAAGAGTACCGACGGCCCCGGCGGGGGCGAGCCATGTTaGCTGTCGCTCAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: HTHTHAHTNENKSTDGPGGGEPC*LSLSWA
Trigger: AGCCCAGCTGAGCGACAGCCAACATGGCTCGCCCCC...GCCGGGGCCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGCGTGTGTGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACACCACACCCGGAGCCTCCACTaGACCCAGGGTCTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: QRGRRESETSAHAYGTHHTRSLH*TQGLAP
Trigger: AGGGGCAAGACCCTGGGTCCAGTGGAGGCTCCGGGT...GTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGCCTCTCGGCTCTGCTTaGTACGGACTGTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRPLGSA*YGLSIK
Trigger: TTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAGG...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CACACACACACGCACGCACACACAAATGAAAACAAGAGTACCGACGGCCCCGGCGGCAAGAAGGGCTTCTaGGGCCTGGAGAGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: HTHTHAHTNENKSTDGPGGKKGF*GLERWR
Trigger: GCGCCACCTCTCCAGGCCCCAGAAGCCCTTCTTGCC...GCCGGGGCCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGCGTGTGTGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CAGGTCCCTAGCCTGACTTGCTGGAACCTGAGACCCAGGGTCCAGTCCTCTGTCCTGCCACCCTCCTCATaGTTCCCCTGTCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: QVPSLTCWNLRPRVQSSVLPPSS*FPCQHP
Trigger: TGGGTGCTGACAGGGGAACCATGAGGAGGGTGGCAG...GACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCAAACTCTTGCAGGAATaGAGGATAGGAGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFKLLQE*RIGVAG
Trigger: TCCTGCCACTCCTATCCTCCATTCCTGCAAGAGTTT...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGAAGGTCCCGGCTTTTTaGCTTGAGTGGGACCCTCGC +
Preference number: 4 (lower is better)
Translates to: LHHLASPSMGSRGARWQRKVPAF*LEWDPR
Trigger: GCGAGGGTCCCACTCAAGCCAAAAAGCCGGGACCTT...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGAATACTGACGGATTTTaGGAGTGGGTGGGCGGCCCG +
Preference number: 4 (lower is better)
Translates to: LHHLASPSMGSRGARWQRNTDGF*EWVGGP
Trigger: CGGGCCGCCCACCCACTCCCAAAATCCGTCAGTATT...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGCCTGAGGTGGGGAAAGTTGGTGAGGGTCCGGATCGTTCATTTCACAGGCTGTTTGTCCCCCACGCCTaGGGGTGGACGGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: LPEVGKVGEGPDRSFHRLFVPHA*GWTDAA
Trigger: GGCTGCATCCGTCCACCCCCAGGCGTGGGGGACAAA...CAGCCTGTGAAATGAACGATCCGGACCCTCACCAACTTTCCCCACCTCAGGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR CAA 72 bp GTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTGGCTaGAGTGGGACCCTCGCATCAACCCATCCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: VDRAAQRSRLFG*SGTLASTHPQG
Trigger: CCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAAAGCCGGGACCTTTGCGCAGCTCTGTCGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGTGGTGCCGCGCTGCGTaGACATTTTGCCACAGATGT +
Preference number: 4 (lower is better)
Translates to: LHHLASPSMGSRGARWQRWCRAA*TFCHRC
Trigger: ACATCTGTGGCAAAATGTTCACGCAGCGCGGCACCA...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGGGGAAAACCCACAGGTaGGCTGCAGGCACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVGKTHR*AAGTGP
Trigger: TGGCCCAGTGCCTGCAGCTCACCTGTGGGTTTTCCC...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CAGGAGTGGGGACCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTACAAACGTCGTTGAGTaGGGGGCCTCTGCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: QEWGPTRVDRAAQRSRLFTNVVE*GASAPS
Trigger: ACTGGGAGCAGAGGCCCCTCACTCAACGACGTTTGT...AAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCCCACTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp CAGGTCCCTAGCCTGACTTGCTGGAACCTGAGACCCAGGGTCCAGTCCTCTGTCACAAACGTCGTTGAGTaGGGGGCCTCTGCTCCCAGT +
Preference number: 4 (lower is better)
Translates to: QVPSLTCWNLRPRVQSSVTNVVE*GASAPS
Trigger: ACTGGGAGCAGAGGCCCCTCACTCAACGACGTTTGT...GACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATGGGCCTGAGGTCCAGTaGATACTGACGGATTTTGGG +
Preference number: 4 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDGPEVQ*ILTDFG
Trigger: CCCAAAATCCGTCAGTATTCACTGGACCTCAGGCCC...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CAGGTCCCTAGCCTGACTTGCTGGAACCTGAGACCCAGGGTCCAGTCCTCTGTCCTCTGCTGGTTCAGCTaGAGCAGGAGCTGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: QVPSLTCWNLRPRVQSSVLCWFS*SRSCFE
Trigger: CTCGAAGCAGCTCCTGCTGCAGCTGAACCAGCAGAG...GACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGTTGATGAGGTTGTCGTaGAGGACCAGGGACTTGAAA +
Preference number: 4 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRLMRLS*RTRDLK
Trigger: TTTCAAGTCCCTGGTCCTGCACGACAACCTCATCAA...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GCCAGAGGGCCTTGGGGGCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTTTGATGAGGTTGTCGTaGAGGACCAGGGACTTGAAA +
Preference number: 4 (lower is better)
Translates to: ARGPWGLVSTGPSSLVPALMRLS*RTRDLK
Trigger: TTTCAAGTCCCTGGTCCTGCACGACAACCTCATCAA...AGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGGTCGCTCAGCTGGGCTaGGTCATCGGGAGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQVAQLG*VIGSEV
Trigger: CACCTCACTCCCGATGACGCAGCCCAGCTGAGCGAC...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACAAGGCTCTTCCGAGGCTaGCCACCAGGCGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: LVQRGRRESETSAHAYGTRLFRG*PPGASS
Trigger: GCTGGAGGCGCCTGGTGGGCAGCCTCGGAAGAGCCT...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGGTCATGGTGCCGCGCTaGGTGAACATTTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: LHHLASPSMGSRGARWQRVMVPR*VNILPQ
Trigger: CTGTGGCAAAATGTTCACGCAGCGCGGCACCATGAC...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp ACCAGGGCTGCACGCGCCCGCACAGACACAAGCACACGTGCACACACACAGACATCTTGCCCCTGCTGCTaGATCACCTCGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: TRAARARTDTSTRAHTQTSCPCC*ITSLLL
Trigger: AAGGAGAAGCGAGGTGATGCAGCAGCAGGGGCAAGA...TGTCTGTGTGTGTGCACGTGTGCTTGTGTCTGTGCGGGCGCGTGCAGCCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp TTTTGGCTTGAGTGGGACCCTCGCATCAACCCATCCCCAAGGGTCACGGGCAGACCAGGGTCTTGCCCCTaGTGCTGCATCACCTCGCTT +
Preference number: 4 (lower is better)
Translates to: FWLEWDPRINPSPRVTGRPGSCP*CCITSL
Trigger: AAGCGAGGTGATGCAGCAGCAGGGGCAAGACCCTGG...TCTGCCCGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATTTTCTCCAAGCCGCCTaGAACAAAGGGACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDFLQAA*NKGTRS
Trigger: GGACCTGGTCCCTTTGTTGCAGGCGGCTTGGAGAAA...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACACCACCGCCCTGCTGGCTCCTaGACACGACTTCCTAGGTGC +
Preference number: 4 (lower is better)
Translates to: QRGRRESETSAHAYGTHHRPAGS*TRLPRC
Trigger: GCACCTAGGAAGTCGTGTGCAGGAGCCAGCAGGGCG...GTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CAGGTCCCTAGCCTGACTTGCTGGAACCTGAGACCCAGGGTCCAGTCCTCTGTCGGAGCTGCAAAGACCTaGCACCCTCCTCATGGTTCC +
Preference number: 4 (lower is better)
Translates to: QVPSLTCWNLRPRVQSSVGAAKT*HPPHGS
Trigger: GGAACCATGAGGAGGGTGGCAGGTCTTTGCAGCTCC...GACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CAGGAGTGGGGACCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTGTCCCTAGCCTGACTTaGTGGAACCTGAGACCCAGG +
Preference number: 4 (lower is better)
Translates to: QEWGPTRVDRAAQRSRLFVPSLT*WNLRPR
Trigger: CCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGAC...AAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCCCACTCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCCAGAGTCGACAGAGCTaGGCAAAGGTCCCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELQSRQS*AKVPAF
Trigger: AAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTG...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACACCACCAATGCCTGGTCACCTaGCTGGCAGTGGGGTCTCCC +
Preference number: 4 (lower is better)
Translates to: QRGRRESETSAHAYGTHHQCLVT*LAVGSP
Trigger: GGGAGACCCCACTGCCAGCCAGGTGACCAGGCATTG...GTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407598.2
CDS-3UTR CCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATAGGGTGGGCTTTTCTTaGACAGGTCCAAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDRVGFS*TGPSPA
Trigger: AGCTGGGCTTGGACCTGTCCAAGAAAAGCCCACCCT...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCAATAAGAGGCACTGTTaGCAACGGGAGGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: GAILGWDHHREGSARSLINKRHC*QREEQR
Trigger: CCTCTGCTCCTCCCGTTGCCAACAGTGCCTCTTATT...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CAGGTCCCTAGCCTGACTTGCTGGAACCTGAGACCCAGGGTCCAGTCCTCTGTCACTCCTTCTTCCGAGTaGAGTGCCGGAGGCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QVPSLTCWNLRPRVQSSVTPSSE*SAGGSS
Trigger: GGAAGAGCCTCCGGCACTCCACTCGGAAGAAGGAGT...GACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGACTTCCGCCTCACCCTaGCCGGGAGCTGCAAAGACC +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQTSASP*PGAAKT
Trigger: GGTCTTTGCAGCTCCCGGCCAGGGTGAGGCGGAAGT...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCGGCTCTGTTTTTAGCTaGAGGGTCTCTAGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GAILGWDHHREGSARSLIGSVFS*RVSRGV
Trigger: CACCCCTCTAGAGACCCTCCAGCTAAAAACAGAGCC...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGCGGGCCCAAGCTCTTTaGTGCCAGCTGGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQRAQAL*CQLGLE
Trigger: CTCCAAGCCCAGCTGGCACCAAAGAGCTTGGGCCCG...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGGATTTTGGGAGTGGGTaGGCGGCCCGGTGCCCCCGA +
Preference number: 4 (lower is better)
Translates to: CKGITYFHESPHRCGCPQDFGSG*AARCPR
Trigger: TCGGGGGCACCGGGCCGCCCACCCACTCCCAAAATC...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp ACCAGGGCTGCACGCGCCCGCACAGACACAAGCACACGTGCACACACACAGACAAAAGAGTTCATCGTCTaGGCCTTTGGCTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: TRAARARTDTSTRAHTQTKEFIV*AFGLGE
Trigger: CTCCCCCAAGCCAAAGGCTCAGACGATGAACTCTTT...TGTCTGTGTGTGTGCACGTGTGCTTGTGTCTGTGCGGGCGCGTGCAGCCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CTGGGAAATAGGAGGACCTTGGTCCCTTTAGGGGGCATGCCAGGGCTGAGAGCCTGGTGCCGCGCTGCGTaGACATTTTGCCACAGATGT +
Preference number: 4 (lower is better)
Translates to: LGNRRTLVPLGGMPGLRAWCRAA*TFCHRC
Trigger: ACATCTGTGGCAAAATGTTCACGCAGCGCGGCACCA...GGCTCTCAGCCCTGGCATGCCCCCTAAAGGGACCAAGGTCCTCCTATTTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp CAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACACCACGGCGGTACTGACGGGTaGAGCGCATGCCACACTCAT +
Preference number: 4 (lower is better)
Translates to: QRGRRESETSAHAYGTHHGGTDG*SACHTH
Trigger: ATGAGTGTGGCATGCGCTTCACCCGTCAGTACCGCC...GTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp TTTTGGCTTGAGTGGGACCCTCGCATCAACCCATCCCCAAGGGTCACGGGCAGAATAGGAGTGGCAGGATaGGGGCTCACTTCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: FWLEWDPRINPSPRVTGRIGVAG*GLTSAS
Trigger: TGAGGCGGAAGTGAGCCCTCATCCTGCCACTCCTAT...TCTGCCCGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCCACCACTTGGGTCCCTaGACTCAGGCTCTGTTTTTA +
Preference number: 4 (lower is better)
Translates to: GAILGWDHHREGSARSLIHHLGP*TQALFL
Trigger: TAAAAACAGAGCCTGAGTTCAGGGACCCAAGTGGTG...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACACCACATGTGGCTTAAGTGCTaGTGGGGCGGGGTGGCGTCA +
Preference number: 4 (lower is better)
Translates to: QRGRRESETSAHAYGTHHMWLKC*WGGVAS
Trigger: TGACGCCACCCCGCCCCATCAGCACTTAAGCCACAT...GTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CACACACACACGCACGCACACACAAATGAAAACAAGAGTACCGACGGCCCCGGCTCGCACAAACGTCGTTaGGTGAGGGGCCTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: HTHTHAHTNENKSTDGPGSHKRR*VRGLCS
Trigger: GGAGCAGAGGCCCCTCACTCAACGACGTTTGTGCGA...GCCGGGGCCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGCGTGTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGTCCTCCCTGCCCCAGTaGGGTCTGTTATGCAGCATT +
Preference number: 4 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRSSLPQ*GLLCSI
Trigger: AATGCTGCATAACAGACCTCACTGGGGCAGGGAGGA...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp ACCAGGGCTGCACGCGCCCGCACAGACACAAGCACACGTGCACACACACAGACATTTTGCCACAGATGTTaGAGGGGAAGGGCCGTGTCA +
Preference number: 4 (lower is better)
Translates to: TRAARARTDTSTRAHTQTFCHRC*RGRAVS
Trigger: TGACACGGCCCTTCCCCTGCAACATCTGTGGCAAAA...TGTCTGTGTGTGTGCACGTGTGCTTGTGTCTGTGCGGGCGCGTGCAGCCCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCTTTTGCCACAGATGTTaGAGGGGAAGGGCCGTGTCA +
Preference number: 4 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELFCHRC*RGRAVS
Trigger: TGACACGGCCCTTCCCCTGCAACATCTGTGGCAAAA...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGTCTTGCCCCTGCTGCTaGATCACCTCGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRSCPCC*ITSLLL
Trigger: AAGGAGAAGCGAGGTGATGCAGCAGCAGGGGCAAGA...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGCCAGGGTCTTGCCCCTaGTGCTGCATCACCTCGCTT +
Preference number: 4 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVPGSCP*CCITSL
Trigger: AAGCGAGGTGATGCAGCAGCAGGGGCAAGACCCTGG...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGCTGCAGAACCAGGGCTaGACGCGCCCGCACAGACAC +
Preference number: 4 (lower is better)
Translates to: CKGITYFHESPHRCGCPQLQNQG*TRPHRH
Trigger: GTGTCTGTGCGGGCGCGTGCAGCCCTGGTTCTGCAG...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTGCCTGAGGTGGGGAAAGTTGGTGAGGGTCCGGATCGTTCATTTCACAGGCTGAAGGAGGGAGGGATCTaGACCCCCAGCACCTGTTCC +
Preference number: 4 (lower is better)
Translates to: LPEVGKVGEGPDRSFHRLKEGGI*TPSTCS
Trigger: GGAACAGGTGCTGGGGGTGCAGATCCCTCCCTCCTT...CAGCCTGTGAAATGAACGATCCGGACCCTCACCAACTTTCCCCACCTCAGGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCCGAAACATCTGCCCATaGATACGGCACACACCACAC +
Preference number: 4 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELRNICP*IRHTPH
Trigger: GTGTGGTGTGTGCCGTATGCATGGGCAGATGTTTCG...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGAGGAGCTGCTTCGAGTaGCTGGGCAGCTCCATGTCG +
Preference number: 4 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVRSCFE*LGSSMS
Trigger: CGACATGGAGCTGCCCAGCCACTCGAAGCAGCTCCT...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACAAGTCCAAGATCTGCTaGAACACTGTGGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHKSKIC*NTVELT
Trigger: GGTCAGCTCCACAGTGTTCCAGCAGATCTTGGACTT...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGCGGCTGGCTGGTCGCTaGGCAGCAGCTTGCCTGTGT +
Preference number: 4 (lower is better)
Translates to: CKGITYFHESPHRCGCPQRLAGR*AAACLC
Trigger: ACACAGGCAAGCTGCTGCCCAGCGACCAGCCAGCCG...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGCATCGTCTGAGCCTTTaGCTTGGGGGAGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVHRLSL*LGGAPG
Trigger: CCCAGGAGCTCCCCCAAGCCAAAGGCTCAGACGATG...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGGGCAGGGGGCAAGGGTaGGCTTTTCTTGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQGRGQG*AFLGQV
Trigger: GACCTGTCCAAGAAAAGCCCACCCTTGCCCCCTGCC...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCCCTCCAGATCCATaGGCTCATCAGGGGTGCCCC +
Preference number: 4 (lower is better)
Translates to: CKGITYFHESPHRCGCPQPPPDP*AHQGCP
Trigger: GGGGCACCCCTGATGAGCCCATGGATCTGGAGGGGG...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGGCGCCCGCGGGTCTTTaGCTTCTAGGAGGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: CKGITYFHESPHRCGCPQAPAGL*LLGGGG
Trigger: ACCTCCCCCTCCTAGAAGCCAAAGACCCGCGGGCGC...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGCTGCCACCCTCCTCATaGTTCCCCTGTCAGCACCCA +
Preference number: 4 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVLPPSS*FPCQHP
Trigger: TGGGTGCTGACAGGGGAACCATGAGGAGGGTGGCAG...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp ACCAGGGCTGCACGCGCCCGCACAGACACAAGCACACGTGCACACACACAGACAGGCTCTGTTTTTAGCTaGAGGGTCTCTAGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: TRAARARTDTSTRAHTQTGSVFS*RVSRGV
Trigger: CACCCCTCTAGAGACCCTCCAGCTAAAAACAGAGCC...TGTCTGTGTGTGTGCACGTGTGCTTGTGTCTGTGCGGGCGCGTGCAGCCCTGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGACGCCGCTCACCACTTaGGTCCCTGAACTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVTPLTT*VPELRL
Trigger: GAGCCTGAGTTCAGGGACCCAAGTGGTGAGCGGCGT...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCAACTGTAAGCCGCCTTaGCCTCCAATAACCCAGTTT +
Preference number: 4 (lower is better)
Translates to: PSASEQCHPGSRREGSAPNCKPP*PPITQF
Trigger: AAACTGGGTTATTGGAGGCCAAGGCGGCTTACAGTT...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGCAGGGGAGGGTTCCCTaGACTGGCCTTACAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVQGRVP*TGLTAA
Trigger: AGCAGCTGTAAGGCCAGTCCAGGGAACCCTCCCCTG...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATGCTTGCCTGTGTAGATaGAGTCCAAGATCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDACLCR*SPRSAG
Trigger: TCCAGCAGATCTTGGACTTCATCTACACAGGCAAGC...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGAAAAGCACTCTCCCCTaGGGCAGCCGAGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: CKGITYFHESPHRCGCPQKSTLP*GSRGRA
Trigger: AGCCCTGCCTCGGCTGCCTCAGGGGAGAGTGCTTTT...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp ACCAGGGCTGCACGCGCCCGCACAGACACAAGCACACGTGCACACACACAGACAGCACGCACACACAAATaGAAACAAGAGTACCGACGG +
Preference number: 4 (lower is better)
Translates to: TRAARARTDTSTRAHTQTARTHK*KQEYRR
Trigger: CCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGC...TGTCTGTGTGTGTGCACGTGTGCTTGTGTCTGTGCGGGCGCGTGCAGCCCTGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACAGGGAAAACCCACAGGTaGGCTGCAGGCACTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LVQRGRRESETSAHAYGTGKTHR*AAGTGP
Trigger: TGGCCCAGTGCCTGCAGCTCACCTGTGGGTTTTCCC...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGACACGGCCAGGCGCGTaGACATTTCCCGTGCGGTAC +
Preference number: 4 (lower is better)
Translates to: CKGITYFHESPHRCGCPQTRPGA*TFPVRY
Trigger: GTACCGCACGGGAAATGTTCACGCGCCTGGCCGTGT...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACAGGACGAGGGCTCAGGTaGCTCCAGGGAGGCTTCCAA +
Preference number: 4 (lower is better)
Translates to: LVQRGRRESETSAHAYGTGRGLR*LQGGFQ
Trigger: TTGGAAGCCTCCCTGGAGTCACCTGAGCCCTCGTCC...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp AGCAGCAGGGGGACCCAAGCCCAGACTCGGGTCCTGTGGCCAGAACTGACGGCCCACTCGCCCCAAGTCTaGGAAATAAATACATTCATC +
Preference number: 4 (lower is better)
Translates to: SSRGTQAQTRVLWPELTAHSPQV*EINTFI
Trigger: GATGAATGTATTTATTTCTCAGACTTGGGGCGAGTG...GGCCGTCAGTTCTGGCCACAGGACCCGAGTCTGGGCTTGGGTCCCCCTGCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGCTCTGCTGGTTCAGCTaGAGCAGGAGCTGCTTCGAG +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQLCWFS*SRSCFE
Trigger: CTCGAAGCAGCTCCTGCTGCAGCTGAACCAGCAGAG...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTGCCTGAGGTGGGGAAAGTTGGTGAGGGTCCGGATCGTTCATTTCACAGGCTGCCACAGGCTCCTTCTTaGCCCACTCCTTCTTCCGAG +
Preference number: 4 (lower is better)
Translates to: LPEVGKVGEGPDRSFHRLPQAPS*PTPSSE
Trigger: CTCGGAAGAAGGAGTGGGGCAAGAAGGAGCCTGTGG...CAGCCTGTGAAATGAACGATCCGGACCCTCACCAACTTTCCCCACCTCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGCGAAACATCTGCCCATaGATACGGCACACACCACAC +
Preference number: 4 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRRNICP*IRHTPH
Trigger: GTGTGGTGTGTGCCGTATGCATGGGCAGATGTTTCG...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACGCCCTGCTGGCTCCTaGACACGACTTCCTAGGTGC +
Preference number: 4 (lower is better)
Translates to: LVQRGRRESETSAHAYGTRPAGS*TRLPRC
Trigger: GCACCTAGGAAGTCGTGTGCAGGAGCCAGCAGGGCG...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGGGAGCTGCAAAGACCTaGCACCCTCCTCATGGTTCC +
Preference number: 4 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVGAAKT*HPPHGS
Trigger: GGAACCATGAGGAGGGTGGCAGGTCTTTGCAGCTCC...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCCGTGAACATTTCCCGTaGGGTACAGACTTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: GAILGWDHHREGSARSLIREHFP*GTDFVS
Trigger: TGACACAAAGTCTGTACCGCACGGGAAATGTTCACG...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGCCTGGGGATCCTCCCTaGCCCAGTGAGGTCTGTTAT +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQPGDPP*PSEVCY
Trigger: ATAACAGACCTCACTGGGGCAGGGAGGATCCCCAGG...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATAAGTCCAAGATCTGCTaGAACACTGTGGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDKSKIC*NTVELT
Trigger: GGTCAGCTCCACAGTGTTCCAGCAGATCTTGGACTT...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCCTTGCACGCTATCCTaGTTAGAGCCACCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDPCTLS*LEPPRK
Trigger: CTTTCTTGGTGGCTCTAACCAGGATAGCGTGCAAGG...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CACACACACACGCACGCACACACAAATGAAAACAAGAGTACCGACGGCCCCGGCTCGCTTCTCCTTCCATaGGTTCCCGGGGAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: HTHTHAHTNENKSTDGPGSLLLP*VPGEQG
Trigger: ACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGA...GCCGGGGCCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGCGTGTGTGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCAAACTCTTGCAGGAATaGAGGATAGGAGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GAILGWDHHREGSARSLIKLLQE*RIGVAG
Trigger: TCCTGCCACTCCTATCCTCCATTCCTGCAAGAGTTT...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGCCCCACAGCTTCAGCTaGCTGAAGACAGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQPHSFS*LKTVGL
Trigger: CAGTCCCACTGTCTTCAGCCAGCTGAAGCTGTGGGG...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CACACACACACGCACGCACACACAAATGAAAACAAGAGTACCGACGGCCCCGGCCCCCACAGCTTCAGCTaGCTGAAGACAGTGGGACTG +
Preference number: 4 (lower is better)
Translates to: HTHTHAHTNENKSTDGPGPHSFS*LKTVGL
Trigger: CAGTCCCACTGTCTTCAGCCAGCTGAAGCTGTGGGG...GCCGGGGCCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGCGTGTGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGGCTTTTTGGCTTGAGTaGGACCCTCGCATCAACCCA +
Preference number: 4 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRAFWLE*DPRINP
Trigger: TGGGTTGATGCGAGGGTCCCACTCAAGCCAAAAAGC...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGAAGGTCCCGGCTTTTTaGCTTGAGTGGGACCCTCGC +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQKVPAF*LEWDPR
Trigger: GCGAGGGTCCCACTCAAGCCAAAAAGCCGGGACCTT...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGGGAACACTGTGGAGCTaGCCATGTCTGTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVGTLWS*PCLCPG
Trigger: ACCTGGACACAGACATGGTCAGCTCCACAGTGTTCC...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGCTCACTGAGTATGGGTaGAGTCCATGGGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVLTEYG*SPWVSS
Trigger: GGAGGAGACCCATGGACTTCACCCATACTCAGTGAG...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCACAGCTGCTGAGGTCTaGAACTGTAAAAGCTTATGT +
Preference number: 4 (lower is better)
Translates to: PSASEQCHPGSRREGSAPTAAEV*NCKSLC
Trigger: ACATAAGCTTTTACAGTTTCAGACCTCAGCAGCTGT...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGTCCTCCCTGCCCCAGTaGGGTCTGTTATGCAGCATT +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQSSLPQ*GLLCSI
Trigger: AATGCTGCATAACAGACCTCACTGGGGCAGGGAGGA...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp ACCAGGGCTGCACGCGCCCGCACAGACACAAGCACACGTGCACACACACAGACAATGAAGTCCAAGATCTaGTGGAACACTGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: TRAARARTDTSTRAHTQTMKSKI*WNTVEL
Trigger: CAGCTCCACAGTGTTCCAGCAGATCTTGGACTTCAT...TGTCTGTGTGTGTGCACGTGTGCTTGTGTCTGTGCGGGCGCGTGCAGCCCTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATATGAAGTCCAAGATCTaGTGGAACACTGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDMKSKI*WNTVEL
Trigger: CAGCTCCACAGTGTTCCAGCAGATCTTGGACTTCAT...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTGCCTGAGGTGGGGAAAGTTGGTGAGGGTCCGGATCGTTCATTTCACAGGCTGTCTTGCCCCTGCTGCTaGATCACCTCGCTTCTCCTT +
Preference number: 4 (lower is better)
Translates to: LPEVGKVGEGPDRSFHRLSCPCC*ITSLLL
Trigger: AAGGAGAAGCGAGGTGATGCAGCAGCAGGGGCAAGA...CAGCCTGTGAAATGAACGATCCGGACCCTCACCAACTTTCCCCACCTCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGGTCAAGGGCTTCCACTaGCAGTCACCAACATATCGT +
Preference number: 4 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRVKGFH*QSPTYR
Trigger: ACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGAC...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCCGTGAACATTTCCCGTaGGGTACAGACTTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELREHFP*GTDFVS
Trigger: TGACACAAAGTCTGTACCGCACGGGAAATGTTCACG...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGCAGAGTCGACAGAGCTaGGCAAAGGTCCCGGCTTTT +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQQSRQS*AKVPAF
Trigger: AAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTG...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTACTGTTAAGAGTGTTTaGACCGTCTATGTTGGTAAG +
Preference number: 4 (lower is better)
Translates to: APRQWPGARTAQGSAIPVTVKSV*TVYVGK
Trigger: CTTACCAACATAGACGGTGCAAACACTCTTAACAGT...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGGCTAGGACGTTCTTGTaGGCCCGGAAGATGGAGTTC +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQARTFL*ARKMEF
Trigger: GAACTCCATCTTCCGGGCCCACAAGAACGTCCTAGC...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACATCGTCTGAGCCTTTaGCTTGGGGGAGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: LVQRGRRESETSAHAYGTHRLSL*LGGAPG
Trigger: CCCAGGAGCTCCCCCAAGCCAAAGGCTCAGACGATG...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CACACACACACGCACGCACACACAAATGAAAACAAGAGTACCGACGGCCCCGGCAGGGTGGGCTTTTCTTaGACAGGTCCAAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: HTHTHAHTNENKSTDGPGRVGFS*TGPSPA
Trigger: AGCTGGGCTTGGACCTGTCCAAGAAAAGCCCACCCT...GCCGGGGCCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGCGTGTGTGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp AGCAGCAGGGGGACCCAAGCCCAGACTCGGGTCCTGTGGCCAGAACTGACGGCCCGCACACACCTGATGTaGAAATCAAAGGAAAAAGAA +
Preference number: 4 (lower is better)
Translates to: SSRGTQAQTRVLWPELTARTHLM*KSKEKE
Trigger: TTCTTTTTCCTTTGATTTCCACATCAGGTGTGTGCG...GGCCGTCAGTTCTGGCCACAGGACCCGAGTCTGGGCTTGGGTCCCCCTGCTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGCAGACTCGGGTCCTGTaGCCAGAACTGACGGCCATC +
Preference number: 4 (lower is better)
Translates to: CKGITYFHESPHRCGCPQQTRVL*PELTAI
Trigger: GATGGCCGTCAGTTCTGGCCACAGGACCCGAGTCTG...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACAGGGCTGCCTGAGGTaGGGAAAGTTGGTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: LVQRGRRESETSAHAYGTQGCLR*GKLVRV
Trigger: GACCCTCACCAACTTTCCCCACCTCAGGCAGCCCTG...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACCATCCACGAGCCCCTaGTACCGAGCTTGGATGACA +
Preference number: 4 (lower is better)
Translates to: LVQRGRRESETSAHAYGTPSTSP*YRAWMT
Trigger: TGTCATCCAAGCTCGGTATCAGGGGCTCGTGGATGG...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGAGCTCTTCCTCCGTGTaGGTCTCCACGTGCGCATTG +
Preference number: 4 (lower is better)
Translates to: CKGITYFHESPHRCGCPQSSSSV*VSTCAL
Trigger: CAATGCGCACGTGGAGACTCACACGGAGGAAGAGCT...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACAAGCTCTTCCTCCGTGTaGGTCTCCACGTGCGCATTG +
Preference number: 4 (lower is better)
Translates to: LVQRGRRESETSAHAYGTSSSSV*VSTCAL
Trigger: CAATGCGCACGTGGAGACTCACACGGAGGAAGAGCT...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGATAGGAGTGGCAGGATaGGGGCTCACTTCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: CKGITYFHESPHRCGCPQIGVAG*GLTSAS
Trigger: TGAGGCGGAAGTGAGCCCTCATCCTGCCACTCCTAT...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp TTTTGGCTTGAGTGGGACCCTCGCATCAACCCATCCCCAAGGGTCACGGGCAGAGCCCACAGAAGTATCTaGGGCTGGCTAATTACCAAG +
Preference number: 4 (lower is better)
Translates to: FWLEWDPRINPSPRVTGRAHRSI*GWLITK
Trigger: CTTGGTAATTAGCCAGCCTCAGATACTTCTGTGGGC...TCTGCCCGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTTATGCTGCGAGTCTCTaGGATTCTTATTTGCTTAAA +
Preference number: 4 (lower is better)
Translates to: APRQWPGARTAQGSAIPVYAASL*DSYLLK
Trigger: TTTAAGCAAATAAGAATCTCAGAGACTCGCAGCATA...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACCCTCCTCTCGGCTCTaGTTGGTACGGACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: LVQRGRRESETSAHAYGTPSSRL*LVRTVH
Trigger: ATGGACAGTCCGTACCAAGCAGAGCCGAGAGGAGGG...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCTCCTCTCGGCTCTaGTTGGTACGGACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: CKGITYFHESPHRCGCPQPSSRL*LVRTVH
Trigger: ATGGACAGTCCGTACCAAGCAGAGCCGAGAGGAGGG...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACACCACCGAAACATCTGCCCATaGATACGGCACACACCACAC +
Preference number: 4 (lower is better)
Translates to: QRGRRESETSAHAYGTHHRNICP*IRHTPH
Trigger: GTGTGGTGTGTGCCGTATGCATGGGCAGATGTTTCG...GTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGTCGCTTCTCCTTCCATaGGTTCCCGGGGAGCAAGGT +
Preference number: 4 (lower is better)
Translates to: CKGITYFHESPHRCGCPQSLLLP*VPGEQG
Trigger: ACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGA...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTGGGAAATAGGAGGACCTTGGTCCCTTTAGGGGGCATGCCAGGGCTGAGAGCCAAACTCTTGCAGGAATaGAGGATAGGAGTGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LGNRRTLVPLGGMPGLRAKLLQE*RIGVAG
Trigger: TCCTGCCACTCCTATCCTCCATTCCTGCAAGAGTTT...GGCTCTCAGCCCTGGCATGCCCCCTAAAGGGACCAAGGTCCTCCTATTTCCCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGAACTGTAAGCCGCCTTaGCCTCCAATAACCCAGTTT +
Preference number: 4 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRNCKPP*PPITQF
Trigger: AAACTGGGTTATTGGAGGCCAAGGCGGCTTACAGTT...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGGTCTGCTCTAAGGCCTaGCACCTTTGGCTTTTGTCC +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQVCSKA*HLWLLS
Trigger: GGACAAAAGCCAAAGGTGCCAGGCCTTAGAGCAGAC...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGACTGTCCCAGCGCCAGTaGACAGTGCCACCCTGGCTC +
Preference number: 4 (lower is better)
Translates to: VSRASTASHQHIVVMNSRLSQRQ*TVPPWL
Trigger: GAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAG...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACTCACTGAGTATGGGTaGAGTCCATGGGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LVQRGRRESETSAHAYGTLTEYG*SPWVSS
Trigger: GGAGGAGACCCATGGACTTCACCCATACTCAGTGAG...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGTCTGCTCCCAGTCCCTaGAGTTCTGCAAAGGAATCA +
Preference number: 4 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVSAPSP*SSAKES
Trigger: TGATTCCTTTGCAGAACTTCAGGGACTGGGAGCAGA...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CACACACACACGCACGCACACACAAATGAAAACAAGAGTACCGACGGCCCCGGCTCTGCTCCCAGTCCCTaGAGTTCTGCAAAGGAATCA +
Preference number: 4 (lower is better)
Translates to: HTHTHAHTNENKSTDGPGSAPSP*SSAKES
Trigger: TGATTCCTTTGCAGAACTTCAGGGACTGGGAGCAGA...GCCGGGGCCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGCGTGTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATACAGCTGCTGAGGTCTaGAACTGTAAAAGCTTATGT +
Preference number: 4 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDTAAEV*NCKSLC
Trigger: ACATAAGCTTTTACAGTTTCAGACCTCAGCAGCTGT...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGATCCTGTGGCCAGAACTaGCGGCCATCCCCGCGTAGG +
Preference number: 4 (lower is better)
Translates to: VSRASTASHQHIVVMNSRSCGQN*RPSPRR
Trigger: CCTACGCGGGGATGGCCGTCAGTTCTGGCCACAGGA...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCACTCGCCCCAAGTCTaGGAAATAAATACATTCATC +
Preference number: 4 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDHSPQV*EINTFI
Trigger: GATGAATGTATTTATTTCTCAGACTTGGGGCGAGTG...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp CCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCTATGCTGCGAGTCTCTaGGATTCTTATTTGCTTAAA +
Preference number: 4 (lower is better)
Translates to: PSASEQCHPGSRREGSAPYAASL*DSYLLK
Trigger: TTTAAGCAAATAAGAATCTCAGAGACTCGCAGCATA...GGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp CACACACACACGCACGCACACACAAATGAAAACAAGAGTACCGACGGCCCCGGCAGGTCCAGTGAATACTaGCGGATTTTGGGAGTGGGT +
Preference number: 4 (lower is better)
Translates to: HTHTHAHTNENKSTDGPGRSSEY*RILGVG
Trigger: ACCCACTCCCAAAATCCGTCAGTATTCACTGGACCT...GCCGGGGCCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGCGTGTGTGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGGGGCCTGAGGTCCAGTaGATACTGACGGATTTTGGG +
Preference number: 4 (lower is better)
Translates to: CKGITYFHESPHRCGCPQGPEVQ*ILTDFG
Trigger: CCCAAAATCCGTCAGTATTCACTGGACCTCAGGCCC...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGGGAAAGCGAAACATCTaGCCATGCATACGGCACACA +
Preference number: 4 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVGKRNI*PCIRHT
Trigger: TGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCC...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGAGAAGTTGGGCTCGGCTaGCTGGTCGCTGGGCAGCAG +
Preference number: 4 (lower is better)
Translates to: VSRASTASHQHIVVMNSREVGLG*LVAGQQ
Trigger: CTGCTGCCCAGCGACCAGCCAGCCGAGCCCAACTTC...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGAGGGGGCGAGCCATGTTaGCTGTCGCTCAGCTGGGCT +
Preference number: 4 (lower is better)
Translates to: VSRASTASHQHIVVMNSRGGEPC*LSLSWA
Trigger: AGCCCAGCTGAGCGACAGCCAACATGGCTCGCCCCC...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGACCGTGTAGGCCGCACTaGGTGCTGACAGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: VSRASTASHQHIVVMNSRPCRPH*VLTGPR
Trigger: CCGAGGACCTGTCAGCACCCAGTGCGGCCTACACGG...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACACCACCCTCTCGGCTCTGCTTaGTACGGACTGTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: QRGRRESETSAHAYGTHHPLGSA*YGLSIK
Trigger: TTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAGG...GTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCTGGGCCCCGAGACAGTaGCCGGGGGCCAGGACTGCT +
Preference number: 4 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFWAPRQ*PGARTA
Trigger: AGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCA...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGGGCCGCACTGGGTGCTaGCAGGTCCTCGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEGRTGC*QVLGLL
Trigger: GAGGAGGCCGAGGACCTGTCAGCACCCAGTGCGGCC...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGAAAAAGCACTCTCCCCTaGGGCAGCCGAGGCAGGGCT +
Preference number: 4 (lower is better)
Translates to: VSRASTASHQHIVVMNSRKSTLP*GSRGRA
Trigger: AGCCCTGCCTCGGCTGCCTCAGGGGAGAGTGCTTTT...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGAACACGGCCAGGCGCGTaGACATTTCCCGTGCGGTAC +
Preference number: 4 (lower is better)
Translates to: VSRASTASHQHIVVMNSRTRPGA*TFPVRY
Trigger: GTACCGCACGGGAAATGTTCACGCGCCTGGCCGTGT...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGTTGATGAGGTTGTCGTaGAGGACCAGGGACTTGAAA +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQLMRLS*RTRDLK
Trigger: TTTCAAGTCCCTGGTCCTGCACGACAACCTCATCAA...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGGCGGCGGCAGAGGGCTaGCAACTCGGGCAGCTGGAG +
Preference number: 4 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEAAAEG*QLGQLE
Trigger: CTCCAGCTGCCCGAGTTGGCAGCCCTCTGCCGCCGC...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCAGGCTCTTCCGAGGCTaGCCACCAGGCGCCTCCAGC +
Preference number: 4 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFRLFRG*PPGASS
Trigger: GCTGGAGGCGCCTGGTGGGCAGCCTCGGAAGAGCCT...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACCTTGGCGCAGGGAATaGACACATACAAGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: LVQRGRRESETSAHAYGTPWRRE*THTSCP
Trigger: GGGACAACTTGTATGTGTGCATTCCCTGCGCCAAGG...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACAAATAAGAGGCACTGTTaGCAACGGGAGGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: LVQRGRRESETSAHAYGTNKRHC*QREEQR
Trigger: CCTCTGCTCCTCCCGTTGCCAACAGTGCCTCTTATT...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGCTCCCGACACCACCCTaGCCGTGGCCAGCGTCCCAC +
Preference number: 4 (lower is better)
Translates to: DTILRWIQYYVAQTSLSELPTPP*PWPASH
Trigger: GTGGGACGCTGGCCACGGCCAGGGTGGTGTCGGGAG...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGACACTTGGCGCCCTGCTaGCTCCTGCACACGACTTCC +
Preference number: 4 (lower is better)
Translates to: VSRASTASHQHIVVMNSRHLAPC*LLHTTS
Trigger: GGAAGTCGTGTGCAGGAGCCAGCAGGGCGCCAAGTG...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACAGGCTCTGTTTTTAGCTaGAGGGTCTCTAGAGGGGTG +
Preference number: 4 (lower is better)
Translates to: LVQRGRRESETSAHAYGTGSVFS*RVSRGV
Trigger: CACCCCTCTAGAGACCCTCCAGCTAAAAACAGAGCC...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGAGGGGCCATCTTAGGCTaGGATCACCACAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: VSRASTASHQHIVVMNSRGAILG*DHHREG
Trigger: GCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCCGCACACACCTGATGTaGAAATCAAAGGAAAAAGAA +
Preference number: 4 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELRTHLM*KSKEKE
Trigger: TTCTTTTTCCTTTGATTTCCACATCAGGTGTGTGCG...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGAACTGTAAGCCGCCTTaGCCTCCAATAACCCAGTTT +
Preference number: 4 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQNCKPP*PPITQF
Trigger: AAACTGGGTTATTGGAGGCCAAGGCGGCTTACAGTT...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGACGGGCCCAAGCTCTTTaGTGCCAGCTGGGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: VSRASTASHQHIVVMNSRRAQAL*CQLGLE
Trigger: CTCCAAGCCCAGCTGGCACCAAAGAGCTTGGGCCCG...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGTGGAGGAGCCCTTGCTaGGGCTCGGTCCGGCGGGAG +
Preference number: 4 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEWRSPC*GSVRRE
Trigger: CTCCCGCCGGACCGAGCCCCAGCAAGGGCTCCTCCA...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCGACGGATTTTGGGAGTaGGTGGGCGGCCCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFDGFWE*VGGPVP
Trigger: GGGCACCGGGCCGCCCACCCACTCCCAAAATCCGTC...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCGGTTGCGCTGCTGGGTaGACTTGCCCCCGCACAGCT +
Preference number: 4 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFGCAAG*TCPRTA
Trigger: AGCTGTGCGGGGGCAAGTTCACCCAGCAGCGCAACC...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACAGCCCACAGAAGTATCTaGGGCTGGCTAATTACCAAG +
Preference number: 4 (lower is better)
Translates to: LVQRGRRESETSAHAYGTAHRSI*GWLITK
Trigger: CTTGGTAATTAGCCAGCCTCAGATACTTCTGTGGGC...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp TTTTGGCTTGAGTGGGACCCTCGCATCAACCCATCCCCAAGGGTCACGGGCAGACATTCAGGAATTAAGTaGCGAACGCAGAGAACTGTA +
Preference number: 4 (lower is better)
Translates to: FWLEWDPRINPSPRVTGRHSGIK*RTQRTV
Trigger: TACAGTTCTCTGCGTTCGTCACTTAATTCCTGAATG...TCTGCCCGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCGGGGACGCGCAGGAGTaGCAGCGGCCCCTGTTACAT +
Preference number: 4 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFGDAQE*QRPLLH
Trigger: ATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCC...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCTTTGTGTGCCCGGGGTaGCAGGGTCCCCTCGAGGTG +
Preference number: 4 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFFVCPG*QGPLEV
Trigger: CACCTCGAGGGGACCCTGGCACCCCGGGCACACAAA...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACCTCTCGGCTCTGCTTaGTACGGACTGTCCATTAAA +
Preference number: 4 (lower is better)
Translates to: LVQRGRRESETSAHAYGTPLGSA*YGLSIK
Trigger: TTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAGG...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGAGGGCTTCTGGGGCCTaGAGAGGTGGCGCGCCGACA +
Preference number: 4 (lower is better)
Translates to: DTILRWIQYYVAQTSLSERASGA*RGGAPT
Trigger: TGTCGGCGCGCCACCTCTCCAGGCCCCAGAAGCCCT...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGATGAGGGGCGAGAGGTaGGCCCCGAGACAGTGGCCG +
Preference number: 4 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEMRGER*APRQWP
Trigger: CGGCCACTGTCTCGGGGCCCACCTCTCGCCCCTCAT...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGACGGATTTTGGGAGTaGGTGGGCGGCCCGGTGCCC +
Preference number: 4 (lower is better)
Translates to: KARYNTKVDTILCRTNVVDGFWE*VGGPVP
Trigger: GGGCACCGGGCCGCCCACCCACTCCCAAAATCCGTC...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGCATTCAGGAATTAAGTaGCGAACGCAGAGAACTGTA +
Preference number: 4 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVHSGIK*RTQRTV
Trigger: TACAGTTCTCTGCGTTCGTCACTTAATTCCTGAATG...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCCGCCCTGCTGGCTCCTaGACACGACTTCCTAGGTGC +
Preference number: 4 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFRPAGS*TRLPRC
Trigger: GCACCTAGGAAGTCGTGTGCAGGAGCCAGCAGGGCG...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGCCCGGATCGCACTCCTaGACAGGGCCTGAGGTCCAG +
Preference number: 4 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEPGSHS*TGPEVQ
Trigger: CTGGACCTCAGGCCCTGTGCAGGAGTGCGATCCGGG...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGCTGCTTCGAGTGGCTaGGCAGCTCCATGTCGGGCC +
Preference number: 4 (lower is better)
Translates to: KARYNTKVDTILCRTNVVAASSG*AAPCRA
Trigger: GGCCCGACATGGAGCTGCCCAGCCACTCGAAGCAGC...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGCCGTGTAGGCCGCACTaGGTGCTGACAGGTCCTCGG +
Preference number: 4 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEPCRPH*VLTGPR
Trigger: CCGAGGACCTGTCAGCACCCAGTGCGGCCTACACGG...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGCGCCCGCGGGTCTTTaGCTTCTAGGAGGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: KARYNTKVDTILCRTNVVAPAGL*LLGGGG
Trigger: ACCTCCCCCTCCTAGAAGCCAAAGACCCGCGGGCGC...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGACCCGGAGCCTCCACTaGACCCAGGGTCTTGCCCCT +
Preference number: 4 (lower is better)
Translates to: DTILRWIQYYVAQTSLSETRSLH*TQGLAP
Trigger: AGGGGCAAGACCCTGGGTCCAGTGGAGGCTCCGGGT...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGGCAAGAAGGGCTTCTaGGGCCTGGAGAGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: KARYNTKVDTILCRTNVVGKKGF*GLERWR
Trigger: GCGCCACCTCTCCAGGCCCCAGAAGCCCTTCTTGCC...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCGGGGCCATCTTAGGCTaGGATCACCACAGGGAGGGC +
Preference number: 4 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFGAILG*DHHREG
Trigger: GCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTTTTGTCCCCCACGCCTaGGGGTGGACGGATGCAGCC +
Preference number: 4 (lower is better)
Translates to: KARYNTKVDTILCRTNVVFVPHA*GWTDAA
Trigger: GGCTGCATCCGTCCACCCCCAGGCGTGGGGGACAAA...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
3UTR CAA 72 bp CTAAGGTGGATACAATACTATGTCGCACAAACGTCGTaGAGTGAGGGGCCTCTGCTCCCAGTCCCTGAAGTT +
Preference number: 4 (lower is better)
Translates to: LRWIQYYVAQTS*SEGPLLPVPEV
Trigger: AACTTCAGGGACTGGGAGCAGAGGCCCCTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCGGCGGTACTGACGGGTaGAGCGCATGCCACACTCAT +
Preference number: 4 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFGGTDG*SACHTH
Trigger: ATGAGTGTGGCATGCGCTTCACCCGTCAGTACCGCC...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGGGGGCATGCCAGGGCTaGGAGCCCTTGTCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEGACQG*EPLSAL
Trigger: TAGAGCAGACAAGGGCTCTCAGCCCTGGCATGCCCC...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR GCA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCGCCCGGCCCAGACCTTaGACGCTATCCTGGTTAGAG +
Preference number: 4 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFARPRP*TLSWLE
Trigger: CTCTAACCAGGATAGCGTGCAAGGTCTGGGCCGGGC...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCAAGGAGGGAGGGATCTaGACCCCCAGCACCTGTTCC +
Preference number: 4 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFKEGGI*TPSTCS
Trigger: GGAACAGGTGCTGGGGGTGCAGATCCCTCCCTCCTT...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGTGGCTGTCGCTCAGCTaGGCTGCGTCATCGGGAGTG +
Preference number: 4 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEWLSLS*AASSGV
Trigger: CACTCCCGATGACGCAGCCCAGCTGAGCGACAGCCA...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
3UTR CAA 72 bp AAAACAACACTGTTAAGAGTGTTTGCACCGTCTATGTaGGTAAGGACCAGACCCAGTCAGCCCCTTCCGCTG +
Preference number: 4 (lower is better)
Translates to: KTTLLRVFAPSM*VRTRPSQPLPL
Trigger: CAGCGGAAGGGGCTGACTGGGTCTGGTCCTTACCAACATAGACGGTGCAAACACTCTTAACAGTGTTGTTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCGCAGGACCAGGGACTTaGAATAGATGCTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFAGPGT*NRCCWR
Trigger: CCGCCAGCAGCATCTATTTCAAGTCCCTGGTCCTGC...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGACCTTGGCGCAGGGAATaGACACATACAAGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: VSRASTASHQHIVVMNSRPWRRE*THTSCP
Trigger: GGGACAACTTGTATGTGTGCATTCCCTGCGCCAAGG...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTCATCGTCTGAGCCTTTaGCTTGGGGGAGCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KARYNTKVDTILCRTNVVHRLSL*LGGAPG
Trigger: CCCAGGAGCTCCCCCAAGCCAAAGGCTCAGACGATG...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGAAATAAGAGGCACTGTTaGCAACGGGAGGAGCAGAGG +
Preference number: 4 (lower is better)
Translates to: VSRASTASHQHIVVMNSRNKRHC*QREEQR
Trigger: CCTCTGCTCCTCCCGTTGCCAACAGTGCCTCTTATT...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGTGTGCATGCGCAGGTaGCTGATGAGGTTGCGCTGC +
Preference number: 4 (lower is better)
Translates to: KARYNTKVDTILCRTNVVVCMRR*LMRLRC
Trigger: GCAGCGCAACCTCATCAGCCACCTGCGCATGCACAC...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGGCAGGACCAGGGACTTaGAATAGATGCTGCTGGCGG +
Preference number: 4 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEAGPGT*NRCCWR
Trigger: CCGCCAGCAGCATCTATTTCAAGTCCCTGGTCCTGC...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGCCCTCCTCTCGGCTCTaGTTGGTACGGACTGTCCAT +
Preference number: 4 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEPSSRL*LVRTVH
Trigger: ATGGACAGTCCGTACCAAGCAGAGCCGAGAGGAGGG...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCCTGAGAGCCCTTGTCTaGTCTAAGGCCTGGCACCTT +
Preference number: 4 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFLRALV*SKAWHL
Trigger: AAGGTGCCAGGCCTTAGAGCAGACAAGGGCTCTCAG...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCAGGGTGGGCTTTTCTTaGACAGGTCCAAGCCCAGCT +
Preference number: 4 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFRVGFS*TGPSPA
Trigger: AGCTGGGCTTGGACCTGTCCAAGAAAAGCCCACCCT...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp CAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACACCACGATACAATACTAAGGTaGATACAATACTATGTCGCA +
Preference number: 4 (lower is better)
Translates to: QRGRRESETSAHAYGTHHDTILR*IQYYVA
Trigger: TGCGACATAGTATTGTATCCACCTTAGTATTGTATC...GTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGCGCACACACCTGATGTaGAAATCAAAGGAAAAAGAA +
Preference number: 4 (lower is better)
Translates to: CKGITYFHESPHRCGCPQRTHLM*KSKEKE
Trigger: TTCTTTTTCCTTTGATTTCCACATCAGGTGTGTGCG...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGTCATGGTGCCGCGCTaGGTGAACATTTTGCCACAG +
Preference number: 4 (lower is better)
Translates to: KARYNTKVDTILCRTNVVVMVPR*VNILPQ
Trigger: CTGTGGCAAAATGTTCACGCAGCGCGGCACCATGAC...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGTTTCTCCAAGCCGCCTaGAACAAAGGGACCAGGTCC +
Preference number: 4 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEFLQAA*NKGTRS
Trigger: GGACCTGGTCCCTTTGTTGCAGGCGGCTTGGAGAAA...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGCTGAGAGCCCTTGTCTaGTCTAAGGCCTGGCACCTT +
Preference number: 4 (lower is better)
Translates to: DTILRWIQYYVAQTSLSELRALV*SKAWHL
Trigger: AAGGTGCCAGGCCTTAGAGCAGACAAGGGCTCTCAG...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR TCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGAAAGAGTTCATCGTCTaGGCCTTTGGCTTGGGGGAG +
Preference number: 4 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEKEFIV*AFGLGE
Trigger: CTCCCCCAAGCCAAAGGCTCAGACGATGAACTCTTT...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCGCACGCACACACAAATaGAAACAAGAGTACCGACGG +
Preference number: 4 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFARTHK*KQEYRR
Trigger: CCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGC...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGAGGTGTATGGCTATGCTaGGAGTCTCTGAGATTCTTA +
Preference number: 4 (lower is better)
Translates to: VSRASTASHQHIVVMNSRGVWLC*ESLRFL
Trigger: TAAGAATCTCAGAGACTCGCAGCATAGCCATACACC...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACAGATACAATACTAAGGTaGATACAATACTATGTCGCA +
Preference number: 4 (lower is better)
Translates to: LVQRGRRESETSAHAYGTDTILR*IQYYVA
Trigger: TGCGACATAGTATTGTATCCACCTTAGTATTGTATC...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGCTTGCCTGTGTAGATaGAGTCCAAGATCTGCTGGA +
Preference number: 4 (lower is better)
Translates to: KARYNTKVDTILCRTNVVACLCR*SPRSAG
Trigger: TCCAGCAGATCTTGGACTTCATCTACACAGGCAAGC...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGGCCCACAGAAGTATCTaGGGCTGGCTAATTACCAAG +
Preference number: 4 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEAHRSI*GWLITK
Trigger: CTTGGTAATTAGCCAGCCTCAGATACTTCTGTGGGC...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTAAGTCCAAGATCTGCTaGAACACTGTGGAGCTGACC +
Preference number: 4 (lower is better)
Translates to: KARYNTKVDTILCRTNVVKSKIC*NTVELT
Trigger: GGTCAGCTCCACAGTGTTCCAGCAGATCTTGGACTT...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTCCTTGCACGCTATCCTaGTTAGAGCCACCAAGAAAG +
Preference number: 4 (lower is better)
Translates to: KARYNTKVDTILCRTNVVPCTLS*LEPPRK
Trigger: CTTTCTTGGTGGCTCTAACCAGGATAGCGTGCAAGG...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTATGAAGTCCAAGATCTaGTGGAACACTGTGGAGCTG +
Preference number: 4 (lower is better)
Translates to: KARYNTKVDTILCRTNVVMKSKI*WNTVEL
Trigger: CAGCTCCACAGTGTTCCAGCAGATCTTGGACTTCAT...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR TCA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTCATTCAGGAATTAAGTaGCGAACGCAGAGAACTGTA +
Preference number: 4 (lower is better)
Translates to: KARYNTKVDTILCRTNVVHSGIK*RTQRTV
Trigger: TACAGTTCTCTGCGTTCGTCACTTAATTCCTGAATG...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR GCA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCACTGTTAAGAGTGTTTaGACCGTCTATGTTGGTAAG +
Preference number: 4 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFTVKSV*TVYVGK
Trigger: CTTACCAACATAGACGGTGCAAACACTCTTAACAGT...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CCA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGGATACAATACTAAGGTaGATACAATACTATGTCGCA +
Preference number: 4 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEDTILR*IQYYVA
Trigger: TGCGACATAGTATTGTATCCACCTTAGTATTGTATC...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGCCCGGGCAGGGACCCTaGGGCCCTGCTTCTCTCCGC +
Preference number: 5 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGPGQGP*GPASLR
Trigger: GCGGAGAGAAGCAGGGCCCAAGGGTCCCTGCCCGGG...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CCCAGCGAGACCCACGTGACCCAGCCCACAGGCCCTGCGGTGGCCCCCGCGGGGCCCCTGATACCGAGCTaGGATGACAGAGGCCGTGGA +
Preference number: 5 (lower is better)
Translates to: PSETHVTQPTGPAVAPAGPLIPS*DDRGRG
Trigger: TCCACGGCCTCTGTCATCCAAGCTCGGTATCAGGGG...CCCCGCGGGGGCCACCGCAGGGCCTGTGGGCTGGGTCACGTGGGTCTCGCTGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCGGCGCCCGCGGGTCTTaGGCTTCTAGGAGGGGGAGG +
Preference number: 5 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFGARGS*ASRRGR
Trigger: CCTCCCCCTCCTAGAAGCCAAAGACCCGCGGGCGCC...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTCCGGCTCGCTTGAGTTaGCGGCGGCAGAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: APRQWPGARTAQGSAIPVPARLS*RRQRAA
Trigger: GGCAGCCCTCTGCCGCCGCAAACTCAAGCGAGCCGG...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCTCGCAGACCGAACACTaGAAGGGCCGGGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: ERWAPRQWPGARTAQGSASQTEH*KGRGSA
Trigger: GGCTGAGCCCCGGCCCTTCAAGTGTTCGGTCTGCGA...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTATCCTGGAGGAGCCCTaGCTGGGGCTCGGTCCGGCG +
Preference number: 5 (lower is better)
Translates to: APRQWPGARTAQGSAIPVILEEP*LGLGPA
Trigger: CGCCGGACCGAGCCCCAGCAAGGGCTCCTCCAGGAT...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS GCA 90 bp CCCCACTCCTTCTTCCGAGTGGAGTGCCGGAGGCTCTTCCGAGGCTaGCCACCAGGCGCCTCCAGCAGGCTCAGGTGGTTGTCCTCGGCC +
Preference number: 5 (lower is better)
Translates to: PHSFFRVECRRLFRG*PPGASSRLRWLSSA
Trigger: GGCCGAGGACAACCACCTGAGCCTGCTGGAGGCGCCTGGTGGGCAGCCTCGGAAGAGCCTCCGGCACTCCACTCGGAAGAAGGAGTGGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS GCA 90 bp CCCGACCCCCTCACCCTCCTCTCCCGGGCAGGGACCCTTGGGCCCTaGTTCTCTCCGCTCAAAGGGGGAGCCAGCCACAGGCTCCTTCTT +
Preference number: 5 (lower is better)
Translates to: PDPLTLLSRAGTLGP*FSPLKGGASHRLLL
Trigger: AAGAAGGAGCCTGTGGCTGGCTCCCCCTTTGAGCGGAGAGAAGCAGGGCCCAAGGGTCCCTGCCCGGGAGAGGAGGGTGAGGGGGTCGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp AGCAGCAGGGGGACCCAAGCCCAGACTCGGGTCCTGTGGCCAGAACTGACGGCCGGCTTGCCGGCTCGCTaGAGTTTGCGGCGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: SSRGTQAQTRVLWPELTAGLPAR*SLRRQR
Trigger: CCTCTGCCGCCGCAAACTCAAGCGAGCCGGCAAGCC...GGCCGTCAGTTCTGGCCACAGGACCCGAGTCTGGGCTTGGGTCCCCCTGCTGCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACTCCGGCCAGAGGGCCTaGGGGGCTGGTCAGCACGGG +
Preference number: 5 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHSGQRA*GAGQHG
Trigger: CCCGTGCTGACCAGCCCCCAAGGCCCTCTGGCCGGA...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS GCA 90 bp GCCAAAGGGCTTGCCGGCTCGCTTGAGTTTGCGGCGGCAGAGGGCTaGCAACTCGGGCAGCTGGAGGTAGCTGGCGGCAGTGAGGAGGGT +
Preference number: 5 (lower is better)
Translates to: AKGLAGSLEFAAAEG*QLGQLEVAGGSEEG
Trigger: ACCCTCCTCACTGCCGCCAGCTACCTCCAGCTGCCCGAGTTGGCAGCCCTCTGCCGCCGCAAACTCAAGCGAGCCGGCAAGCCCTTTGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS CCA 90 bp CTGTTGGCAACGGGAGGAGCAGAGGCCGCAGGGGGCGAGCCATGTTaGCTGTCGCTCAGCTGGGCTGCGTCATCGGGAGTGAGGTGGGGA +
Preference number: 5 (lower is better)
Translates to: LLATGGAEAAGGEPC*LSLSWAASSGVRWG
Trigger: TCCCCACCTCACTCCCGATGACGCAGCCCAGCTGAGCGACAGCCAACATGGCTCGCCCCCTGCGGCCTCTGCTCCTCCCGTTGCCAACAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCCCGGCTCGCTTGAGTTaGCGGCGGCAGAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: GAILGWDHHREGSARSLIPARLS*RRQRAA
Trigger: GGCAGCCCTCTGCCGCCGCAAACTCAAGCGAGCCGG...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCCCAGAGCCAAAGGGCTaGCCGGCTCGCTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: ERWAPRQWPGARTAQGSAPEPKG*PARLSL
Trigger: CAAACTCAAGCGAGCCGGCAAGCCCTTTGGCTCTGG...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCTCATCGTCTGAGCCTTaGGCTTGGGGGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: ERWAPRQWPGARTAQGSASSSEP*AWGSSW
Trigger: CCAGGAGCTCCCCCAAGCCAAAGGCTCAGACGATGA...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp ACCAGGGCTGCACGCGCCCGCACAGACACAAGCACACGTGCACACACACAGACACCCCCGCTGCTCCCGTaGGTGCTGCTGCTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: TRAARARTDTSTRAHTQTPPLLP*VLLLQP
Trigger: GGGCTGCAGCAGCAGCACCAACGGGAGCAGCGGGGG...TGTCTGTGTGTGTGCACGTGTGCTTGTGTCTGTGCGGGCGCGTGCAGCCCTGGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCCCCCGCTGCTCCCGTaGGTGCTGCTGCTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDPPLLP*VLLLQP
Trigger: GGGCTGCAGCAGCAGCACCAACGGGAGCAGCGGGGG...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCCCGGGCAGGGACCCTaGGGCCCTGCTTCTCTCCGC +
Preference number: 5 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDPGQGP*GPASLR
Trigger: GCGGAGAGAAGCAGGGCCCAAGGGTCCCTGCCCGGG...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCCTAGCCAGGATGCCATaGGGAACCCTGTCCCCGACC +
Preference number: 5 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFLARMP*GTLSPT
Trigger: GGTCGGGGACAGGGTTCCCAATGGCATCCTGGCTAG...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTTCGCAGACCGAACACTaGAAGGGCCGGGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: APRQWPGARTAQGSAIPVSQTEH*KGRGSA
Trigger: GGCTGAGCCCCGGCCCTTCAAGTGTTCGGTCTGCGA...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACGGCGCCCGCGGGTCTTaGGCTTCTAGGAGGGGGAGG +
Preference number: 5 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHGARGS*ASRRGR
Trigger: CCTCCCCCTCCTAGAAGCCAAAGACCCGCGGGCGCC...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS GCA 90 bp CGTAGCCCTCCTGCCGGTACATGTAGTGGGCGCTGGCATGGCCGCTaGCCCCCTCGCTCCCGCTCTGCGCACTGTCTTCACTTGCATCCT +
Preference number: 5 (lower is better)
Translates to: RSPPAGTCSGRWHGR*PPRSRSAHCLHLHP
Trigger: AGGATGCAAGTGAAGACAGTGCGCAGAGCGGGAGCGAGGGGGGCAGCGGCCATGCCAGCGCCCACTACATGTACCGGCAGGAGGGCTACG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS CCA 90 bp ATGGGTTCCCGGGGAGCAAGGTGGCAGAGGGCGCCCGCGGGTCTTTaGCTTCTAGGAGGGGGAGGTGTGCATGCGCAGGTGGCTGATGAG +
Preference number: 5 (lower is better)
Translates to: MGSRGARWQRAPAGL*LLGGGGVHAQVADE
Trigger: CTCATCAGCCACCTGCGCATGCACACCTCCCCCTCCTAGAAGCCAAAGACCCGCGGGCGCCCTCTGCCACCTTGCTCCCCGGGAACCCAT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GCCAGAGGGCCTTGGGGGCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTGCGGCTAGGACGTTCTaGTGGGCCCGGAAGATGGAG +
Preference number: 5 (lower is better)
Translates to: ARGPWGLVSTGPSSLVPAAARTF*WARKME
Trigger: CTCCATCTTCCGGGCCCACAAGAACGTCCTAGCCGC...AGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCCGGCTCGCTTGAGTTaGCGGCGGCAGAGGGCTGCC +
Preference number: 5 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDPARLS*RRQRAA
Trigger: GGCAGCCCTCTGCCGCCGCAAACTCAAGCGAGCCGG...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GCCAGAGGGCCTTGGGGGCTGGTCAGCACGGGCCCAAGCTCTTTGGTGCCAGCTACTGGACCCAGGGTCTaGCCCCTGCTGCTGCATCAC +
Preference number: 5 (lower is better)
Translates to: ARGPWGLVSTGPSSLVPATGPRV*PLLLHH
Trigger: GTGATGCAGCAGCAGGGGCAAGACCCTGGGTCCAGT...AGCTGGCACCAAAGAGCTTGGGCCCGTGCTGACCAGCCCCCAAGGCCCTCTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp CCAGGGTCCCCTCGAGGTGGATGTGGCCAAAGGCTCAAAGGGAAAACCCACAGGTCCGGCCAGAGGGCCTaGGGGGCTGGTCAGCACGGG +
Preference number: 5 (lower is better)
Translates to: PGSPRGGCGQRLKGKTHRSGQRA*GAGQHG
Trigger: CCCGTGCTGACCAGCCCCCAAGGCCCTCTGGCCGGA...CCTGTGGGTTTTCCCTTTGAGCCTTTGGCCACATCCACCTCGAGGGGACCCTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGGGCTTGCCGGCTCGCTaGAGTTTGCGGCGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: LHHLASPSMGSRGARWQRGLPAR*SLRRQR
Trigger: CCTCTGCCGCCGCAAACTCAAGCGAGCCGGCAAGCC...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCAGCAGGCTCAGGTGGTaGTCCTCGGCCCCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: GAILGWDHHREGSARSLISRLRW*SSAPSR
Trigger: TCTGGAGGGGGCCGAGGACAACCACCTGAGCCTGCT...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp TGCAGCGCCAGAGCCGGGGGACGCGCAGGAGTGCCAGCGGCCCCTGTTACATTCCTGAGGTGGGGAAAGTaGGTGAGGGTCCGGATCGTT +
Preference number: 5 (lower is better)
Translates to: CSARAGGRAGVPAAPVTFLRWGK*VRVRIV
Trigger: AACGATCCGGACCCTCACCAACTTTCCCCACCTCAG...GAATGTAACAGGGGCCGCTGGCACTCCTGCGCGTCCCCCGGCTCTGGCGCTGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp GAGAGGTGGGCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCGGAAATAGGAGGACCTaGGTCCCTTTAGGGGGCATG +
Preference number: 5 (lower is better)
Translates to: ERWAPRQWPGARTAQGSAGNRRT*VPLGGM
Trigger: CATGCCCCCTAAAGGGACCAAGGTCCTCCTATTTCC...GGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGCCCACCTCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp CACGAGTCACCTCACAGATGCGGCTGCCCACAGCCCGGGAGGCCATGCACACGGTCCAGGTTGATGAGGTaGTCGTGCAGGACCAGGGAC +
Preference number: 5 (lower is better)
Translates to: HESPHRCGCPQPGRPCTRSRLMR*SCRTRD
Trigger: GTCCCTGGTCCTGCACGACAACCTCATCAACCTGGA...CCGTGTGCATGGCCTCCCGGGCTGTGGGCAGCCGCATCTGTGAGGTGACTCGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS GCA 90 bp CTGCTTCTCTCCGCTCAAAGGGGGAGCCAGCCACAGGCTCCTTCTTaGCCCACTCCTTCTTCCGAGTGGAGTGCCGGAGGCTCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: LLLSAQRGSQPQAPS*PTPSSEWSAGGSSE
Trigger: CTCGGAAGAGCCTCCGGCACTCCACTCGGAAGAAGGAGTGGGGCAAGAAGGAGCCTGTGGCTGGCTCCCCCTTTGAGCGGAGAGAAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CAGGAGTGGGGACCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTAGCAGGCTCAGGTGGTaGTCCTCGGCCCCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: QEWGPTRVDRAAQRSRLFSRLRW*SSAPSR
Trigger: TCTGGAGGGGGCCGAGGACAACCACCTGAGCCTGCT...AAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCCCACTCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTAGCCAGGATGCCATaGGGAACCCTGTCCCCGACC +
Preference number: 5 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDLARMP*GTLSPT
Trigger: GGTCGGGGACAGGGTTCCCAATGGCATCCTGGCTAG...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGGGCGCCCGCGGGTCTTaGGCTTCTAGGAGGGGGAGG +
Preference number: 5 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQGARGS*ASRRGR
Trigger: CCTCCCCCTCCTAGAAGCCAAAGACCCGCGGGCGCC...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTTCAGAAGTCTCCACCTaGTTCAGCGAGGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: APRQWPGARTAQGSAIPVSEVST*FSEEGG
Trigger: CCCTCCTTCCTCGCTGAACAAGGTGGAGACTTCTGA...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCCTATACCACAGAGGTTaGTGTGCCCGGGGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: GAILGWDHHREGSARSLILYHRG*CARGAR
Trigger: CCTGGCACCCCGGGCACACAAACCTCTGTGGTATAG...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCTGCACCCCCAGCACGTCGCACAAACGTCGTaGAGTGAGGGGCCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: PVNSATLAQGGRDLHPQHVAQTS*SEGPLL
Trigger: GAGCAGAGGCCCCTCACTCAACGACGTTTGTGCGAC...GTGCTGGGGGTGCAGATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATAGCCCGGCCCAGACCTaGCACGCTATCCTGGTTAGA +
Preference number: 5 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDSPAQT*HAILVR
Trigger: TCTAACCAGGATAGCGTGCAAGGTCTGGGCCGGGCT...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACCCCCGCTGCTCCCGTaGGTGCTGCTGCTGCAGCCC +
Preference number: 5 (lower is better)
Translates to: LVQRGRRESETSAHAYGTPPLLP*VLLLQP
Trigger: GGGCTGCAGCAGCAGCACCAACGGGAGCAGCGGGGG...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CTGGGAAATAGGAGGACCTTGGTCCCTTTAGGGGGCATGCCAGGGCTGAGAGCCACTGGACCCAGGGTCTaGCCCCTGCTGCTGCATCAC +
Preference number: 5 (lower is better)
Translates to: LGNRRTLVPLGGMPGLRATGPRV*PLLLHH
Trigger: GTGATGCAGCAGCAGGGGCAAGACCCTGGGTCCAGT...GGCTCTCAGCCCTGGCATGCCCCCTAAAGGGACCAAGGTCCTCCTATTTCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp CAGGTCCCTAGCCTGACTTGCTGGAACCTGAGACCCAGGGTCCAGTCCTCTGTCACTGGACCCAGGGTCTaGCCCCTGCTGCTGCATCAC +
Preference number: 5 (lower is better)
Translates to: QVPSLTCWNLRPRVQSSVTGPRV*PLLLHH
Trigger: GTGATGCAGCAGCAGGGGCAAGACCCTGGGTCCAGT...GACAGAGGACTGGACCCTGGGTCTCAGGTTCCAGCAAGTCAGGCTAGGGACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGGTCGCACAAACGTCGTaGAGTGAGGGGCCTCTGCTC +
Preference number: 5 (lower is better)
Translates to: LHHLASPSMGSRGARWQRVAQTS*SEGPLL
Trigger: GAGCAGAGGCCCCTCACTCAACGACGTTTGTGCGAC...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GGGGCCATCTTAGGCTGGGATCACCACAGGGAGGGCTCAGCCAGGAGCCTCATCTCCCGGCTTTTTGGCTaGAGTGGGACCCTCGCATCA +
Preference number: 5 (lower is better)
Translates to: GAILGWDHHREGSARSLISRLFG*SGTLAS
Trigger: TGATGCGAGGGTCCCACTCAAGCCAAAAAGCCGGGA...GATGAGGCTCCTGGCTGAGCCCTCCCTGTGGTGATCCCAGCCTAAGATGGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGTCACACAGGAAGCCCTaGGTCCTCTGCTGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: LHHLASPSMGSRGARWQRSHRKP*VLCWFS
Trigger: GCTGAACCAGCAGAGGACCAAGGGCTTCCTGTGTGA...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CTGCATCACCTCGCTTCTCCTTCCATGGGTTCCCGGGGAGCAAGGTGGCAGAGGTCCAGGTTGATGAGGTaGTCGTGCAGGACCAGGGAC +
Preference number: 5 (lower is better)
Translates to: LHHLASPSMGSRGARWQRSRLMR*SCRTRD
Trigger: GTCCCTGGTCCTGCACGACAACCTCATCAACCTGGA...CCTCTGCCACCTTGCTCCCCGGGAACCCATGGAAGGAGAAGCGAGGTGATGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CCCAAGCTCCCTCACCCCCAAAAGACGCCGCTCACCACTTGGGTCCCTGAACTCTCCAGGTTGATGAGGTaGTCGTGCAGGACCAGGGAC +
Preference number: 5 (lower is better)
Translates to: PKLPHPQKTPLTTWVPELSRLMR*SCRTRD
Trigger: GTCCCTGGTCCTGCACGACAACCTCATCAACCTGGA...GAGTTCAGGGACCCAAGTGGTGAGCGGCGTCTTTTGGGGGTGAGGGAGCTTGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGAGGAGGGTGCTGAAGTaGGGCTCGGCTGGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQRRVLK*GSAGWS
Trigger: CGACCAGCCAGCCGAGCCCAACTTCAGCACCCTCCT...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CAGGAGTGGGGACCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTTCATCGTCTGAGCCTTaGGCTTGGGGGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: QEWGPTRVDRAAQRSRLFSSSEP*AWGSSW
Trigger: CCAGGAGCTCCCCCAAGCCAAAGGCTCAGACGATGA...AAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCCCACTCCTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp CAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACACCACTCGCAGACCGAACACTaGAAGGGCCGGGGCTCAGCC +
Preference number: 5 (lower is better)
Translates to: QRGRRESETSAHAYGTHHSQTEH*KGRGSA
Trigger: GGCTGAGCCCCGGCCCTTCAAGTGTTCGGTCTGCGA...GTGGTGTGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS CCA 90 bp CCGCCAGCTGGGCAGACAGCCCGGCCCAGACCTTGCACGCTATCCTaGTTAGAGCCACCAAGAAAGAGTTCATCGTCTGAGCCTTTGGCT +
Preference number: 5 (lower is better)
Translates to: PPAGQTARPRPCTLS*LEPPRKSSSSEPLA
Trigger: AGCCAAAGGCTCAGACGATGAACTCTTTCTTGGTGGCTCTAACCAGGATAGCGTGCAAGGTCTGGGCCGGGCTGTCTGCCCAGCTGGCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CAGGAGTGGGGACCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTTCACACAGGAAGCCCTaGGTCCTCTGCTGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: QEWGPTRVDRAAQRSRLFSHRKP*VLCWFS
Trigger: GCTGAACCAGCAGAGGACCAAGGGCTTCCTGTGTGA...AAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCCCACTCCTG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATGCGCACTGTCTTCACTaGCATCCTTGCCGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDAHCLH*HPCRSP
Trigger: AGGAGAACGGCAAGGATGCAAGTGAAGACAGTGCGC...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CTGACTGTCCCAGCGCCAGTGAACAGTGCCACCCTGGCTCAAGGAGGGAGGGATCGCTGCGTGAACATTTaGCCACAGATGTTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: LTVPAPVNSATLAQGGRDRCVNI*PQMLQG
Trigger: CCCCTGCAACATCTGTGGCAAAATGTTCACGCAGCG...ATCCCTCCCTCCTTGAGCCAGGGTGGCACTGTTCACTGGCGCTGGGACAGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGACGGGCCCAAGCTCTTaGGTGCCAGCTGGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVTGPSS*VPAGLG
Trigger: TCCAAGCCCAGCTGGCACCAAAGAGCTTGGGCCCGT...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGAGGAGGGTGCTGAAGTaGGGCTCGGCTGGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: CKGITYFHESPHRCGCPQRRVLK*GSAGWS
Trigger: CGACCAGCCAGCCGAGCCCAACTTCAGCACCCTCCT...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CACACACACACGCACGCACACACAAATGAAAACAAGAGTACCGACGGCCCCGGCCCAGAGCCAAAGGGCTaGCCGGCTCGCTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: HTHTHAHTNENKSTDGPGPEPKG*PARLSL
Trigger: CAAACTCAAGCGAGCCGGCAAGCCCTTTGGCTCTGG...GCCGGGGCCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGCGTGTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGCCCCTGATACCGAGCTaGGATGACAGAGGCCGTGGA +
Preference number: 5 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVPLIPS*DDRGRG
Trigger: TCCACGGCCTCTGTCATCCAAGCTCGGTATCAGGGG...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CTGGGAAATAGGAGGACCTTGGTCCCTTTAGGGGGCATGCCAGGGCTGAGAGCCGCGCACTGTCTTCACTaGCATCCTTGCCGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LGNRRTLVPLGGMPGLRAAHCLH*HPCRSP
Trigger: AGGAGAACGGCAAGGATGCAAGTGAAGACAGTGCGC...GGCTCTCAGCCCTGGCATGCCCCCTAAAGGGACCAAGGTCCTCCTATTTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp CAGGAGTGGGGACCCACCAGAGTCGACAGAGCTGCGCAAAGGTCCCGGCTTTTTTCAGAAGTCTCCACCTaGTTCAGCGAGGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: QEWGPTRVDRAAQRSRLFSEVST*FSEEGG
Trigger: CCCTCCTTCCTCGCTGAACAAGGTGGAGACTTCTGA...AAAAAGCCGGGACCTTTGCGCAGCTCTGTCGACTCTGGTGGGTCCCCACTCCTG
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp CACACACACACGCACGCACACACAAATGAAAACAAGAGTACCGACGGCCCCGGCCTATACCACAGAGGTTaGTGTGCCCGGGGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: HTHTHAHTNENKSTDGPGLYHRG*CARGAR
Trigger: CCTGGCACCCCGGGCACACAAACCTCTGTGGTATAG...GCCGGGGCCGTCGGTACTCTTGTTTTCATTTGTGTGTGCGTGCGTGTGTGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp TTTTGGCTTGAGTGGGACCCTCGCATCAACCCATCCCCAAGGGTCACGGGCAGATCCCGGCTTTTTGGCTaGAGTGGGACCCTCGCATCA +
Preference number: 5 (lower is better)
Translates to: FWLEWDPRINPSPRVTGRSRLFG*SGTLAS
Trigger: TGATGCGAGGGTCCCACTCAAGCCAAAAAGCCGGGA...TCTGCCCGTGACCCTTGGGGATGGGTTGATGCGAGGGTCCCACTCAAGCCAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp CTGCCTGAGGTGGGGAAAGTTGGTGAGGGTCCGGATCGTTCATTTCACAGGCTGTCACACAGGAAGCCCTaGGTCCTCTGCTGGTTCAGC +
Preference number: 5 (lower is better)
Translates to: LPEVGKVGEGPDRSFHRLSHRKP*VLCWFS
Trigger: GCTGAACCAGCAGAGGACCAAGGGCTTCCTGTGTGA...CAGCCTGTGAAATGAACGATCCGGACCCTCACCAACTTTCCCCACCTCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGGCGGCTAGGACGTTCTaGTGGGCCCGGAAGATGGAG +
Preference number: 5 (lower is better)
Translates to: CKGITYFHESPHRCGCPQAARTF*WARKME
Trigger: CTCCATCTTCCGGGCCCACAAGAACGTCCTAGCCGC...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGACCCGGGCAGGGACCCTaGGGCCCTGCTTCTCTCCGC +
Preference number: 5 (lower is better)
Translates to: VSRASTASHQHIVVMNSRPGQGP*GPASLR
Trigger: GCGGAGAGAAGCAGGGCCCAAGGGTCCCTGCCCGGG...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GCCCCGAGACAGTGGCCGGGGGCCAGGACTGCTCAGGGAAGTGCCATCCCTGTTTCAAGCTTAAAACTCTaGCAGGAATGGAGGATAGGA +
Preference number: 5 (lower is better)
Translates to: APRQWPGARTAQGSAIPVSSLKL*QEWRIG
Trigger: TCCTATCCTCCATTCCTGCAAGAGTTTTAAGCTTGA...AACAGGGATGGCACTTCCCTGAGCAGTCCTGGCCCCCGGCCACTGTCTCGGGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGACGGGCCCAAGCTCTTaGGTGCCAGCTGGGCTTGGA +
Preference number: 5 (lower is better)
Translates to: CKGITYFHESPHRCGCPQTGPSS*VPAGLG
Trigger: TCCAAGCCCAGCTGGCACCAAAGAGCTTGGGCCCGT...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGCTGAGGTGGGGAAAGTaGGTGAGGGTCCGGATCGTT +
Preference number: 5 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQLRWGK*VRVRIV
Trigger: AACGATCCGGACCCTCACCAACTTTCCCCACCTCAG...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGTGGCACCTTTGGCTTTaGTCCCCCACGCCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: CKGITYFHESPHRCGCPQWHLWL*SPTPGG
Trigger: ACCCCCAGGCGTGGGGGACAAAAGCCAAAGGTGCCA...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACAAGCCCGGCCCAGACCTaGCACGCTATCCTGGTTAGA +
Preference number: 5 (lower is better)
Translates to: LVQRGRRESETSAHAYGTSPAQT*HAILVR
Trigger: TCTAACCAGGATAGCGTGCAAGGTCTGGGCCGGGCT...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CTCTCGGCTCTGCTTGGTACGGACTGTCCATTAAAGCTCTGGGTGTGGGCAGTGGCGCACTGTCTTCACTaGCATCCTTGCCGTTCTCCT +
Preference number: 5 (lower is better)
Translates to: LSALLGTDCPLKLWVWAVAHCLH*HPCRSP
Trigger: AGGAGAACGGCAAGGATGCAAGTGAAGACAGTGCGC...CACTGCCCACACCCAGAGCTTTAATGGACAGTCCGTACCAAGCAGAGCCGAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CTGCCTGAGGTGGGGAAAGTTGGTGAGGGTCCGGATCGTTCATTTCACAGGCTGTCAGAAGTCTCCACCTaGTTCAGCGAGGAAGGAGGG +
Preference number: 5 (lower is better)
Translates to: LPEVGKVGEGPDRSFHRLSEVST*FSEEGG
Trigger: CCCTCCTTCCTCGCTGAACAAGGTGGAGACTTCTGA...CAGCCTGTGAAATGAACGATCCGGACCCTCACCAACTTTCCCCACCTCAGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACTATACCACAGAGGTTaGTGTGCCCGGGGTGCCAGG +
Preference number: 5 (lower is better)
Translates to: LVQRGRRESETSAHAYGTLYHRG*CARGAR
Trigger: CCTGGCACCCCGGGCACACAAACCTCTGTGGTATAG...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGAAGGAGGGTGCTGAAGTaGGGCTCGGCTGGCTGGTCG +
Preference number: 5 (lower is better)
Translates to: VSRASTASHQHIVVMNSRRRVLK*GSAGWS
Trigger: CGACCAGCCAGCCGAGCCCAACTTCAGCACCCTCCT...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CTTGTTCAGCGAGGAAGGAGGGAAAGCGAAACATCTGCCCATGCATACGGCACACGCTGCGTGAACATTTaGCCACAGATGTTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: LVQRGRRESETSAHAYGTRCVNI*PQMLQG
Trigger: CCCCTGCAACATCTGTGGCAAAATGTTCACGCAGCG...TGTGCCGTATGCATGGGCAGATGTTTCGCTTTCCCTCCTTCCTCGCTGAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GGTACAGACTTTGTGTCATGTGGCTTAAGTGCTGATGGGGCGGGGTGGCGTCAGTTTGCACCGTCTATGTaGGTAAGGACCAGACCCAGT +
Preference number: 5 (lower is better)
Translates to: GTDFVSCGLSADGAGWRQFAPSM*VRTRPS
Trigger: ACTGGGTCTGGTCCTTACCAACATAGACGGTGCAAA...CTGACGCCACCCCGCCCCATCAGCACTTAAGCCACATGACACAAAGTCTGTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGATCCTGGAGGAGCCCTaGCTGGGGCTCGGTCCGGCG +
Preference number: 5 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEILEEP*LGLGPA
Trigger: CGCCGGACCGAGCCCCAGCAAGGGCTCCTCCAGGAT...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGGCTTGCCGGCTCGCTaGAGTTTGCGGCGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: KARYNTKVDTILCRTNVVGLPAR*SLRRQR
Trigger: CCTCTGCCGCCGCAAACTCAAGCGAGCCGGCAAGCC...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGATCATCGTCTGAGCCTTaGGCTTGGGGGAGCTCCTGG +
Preference number: 5 (lower is better)
Translates to: VSRASTASHQHIVVMNSRSSSEP*AWGSSW
Trigger: CCAGGAGCTCCCCCAAGCCAAAGGCTCAGACGATGA...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTAGCAGGCTCAGGTGGTaGTCCTCGGCCCCCTCCAGA +
Preference number: 5 (lower is better)
Translates to: KARYNTKVDTILCRTNVVSRLRW*SSAPSR
Trigger: TCTGGAGGGGGCCGAGGACAACCACCTGAGCCTGCT...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp CTGCCTGAGGTGGGGAAAGTTGGTGAGGGTCCGGATCGTTCATTTCACAGGCTGTCAAGCTTAAAACTCTaGCAGGAATGGAGGATAGGA +
Preference number: 5 (lower is better)
Translates to: LPEVGKVGEGPDRSFHRLSSLKL*QEWRIG
Trigger: TCCTATCCTCCATTCCTGCAAGAGTTTTAAGCTTGA...CAGCCTGTGAAATGAACGATCCGGACCCTCACCAACTTTCCCCACCTCAGGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp ATCGTTGTCATGAATTCAAGAGGTAGCAAAAGGTCAGAAGTCTCCACCTTGTTCTGGCACCTTTGGCTTTaGTCCCCCACGCCTGGGGGT +
Preference number: 5 (lower is better)
Translates to: IVVMNSRGSKRSEVSTLFWHLWL*SPTPGG
Trigger: ACCCCCAGGCGTGGGGGACAAAAGCCAAAGGTGCCA...GAACAAGGTGGAGACTTCTGACCTTTTGCTACCTCTTGAATTCATGACAACGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp GTGTCAAGGGCTTCCACTGCCAGTCACCAACATATCGTTGTCATGAATTCAAGAGGAAATAGGAGGACCTaGGTCCCTTTAGGGGGCATG +
Preference number: 5 (lower is better)
Translates to: VSRASTASHQHIVVMNSRGNRRT*VPLGGM
Trigger: CATGCCCCCTAAAGGGACCAAGGTCCTCCTATTTCC...TCTTGAATTCATGACAACGATATGTTGGTGACTGGCAGTGGAAGCCCTTGACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS-3UTR CAA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGCCAGAGCCAAAGGGCTaGCCGGCTCGCTTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: DTILRWIQYYVAQTSLSEPEPKG*PARLSL
Trigger: CAAACTCAAGCGAGCCGGCAAGCCCTTTGGCTCTGG...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp TGCAAAGGAATCACCTACTTTCACGAGTCACCTCACAGATGCGGCTGCCCACAGTCAAGCTTAAAACTCTaGCAGGAATGGAGGATAGGA +
Preference number: 5 (lower is better)
Translates to: CKGITYFHESPHRCGCPQSSLKL*QEWRIG
Trigger: TCCTATCCTCCATTCCTGCAAGAGTTTTAAGCTTGA...CTGTGGGCAGCCGCATCTGTGAGGTGACTCGTGAAAGTAGGTGATTCCTTTGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp GATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTGAGTGAGCGCTGCGTGAACATTTaGCCACAGATGTTGCAGGGG +
Preference number: 5 (lower is better)
Translates to: DTILRWIQYYVAQTSLSERCVNI*PQMLQG
Trigger: CCCCTGCAACATCTGTGGCAAAATGTTCACGCAGCG...CTCACTCAACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS-3UTR CAA 90 bp AAGGCTCGATACAATACTAAGGTGGATACAATACTATGTCGCACAAACGTCGTTTTTGCACCGTCTATGTaGGTAAGGACCAGACCCAGT +
Preference number: 5 (lower is better)
Translates to: KARYNTKVDTILCRTNVVFAPSM*VRTRPS
Trigger: ACTGGGTCTGGTCCTTACCAACATAGACGGTGCAAA...AACGACGTTTGTGCGACATAGTATTGTATCCACCTTAGTATTGTATCGAGCCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000407464.7
ENST00000443632.2
CDS CCA 72 bp GCCGCAGGGGGCGAGCCATGTTGGCTGTCGCTCAGCTaGGCTGCGTCATCGGGAGTGAGGTGGGGACCTGGG +
Preference number: 6 (lower is better)
Translates to: AAGGEPCWLSLS*AASSGVRWGPG
Trigger: CCCAGGTCCCCACCTCACTCCCGATGACGCAGCCCAGCTGAGCGACAGCCAACATGGCTCGCCCCCTGCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS CCA 72 bp CGACCCCCTCACCCTCCTCTCCCGGGCAGGGACCCTTaGGCCCTGCTTCTCTCCGCTCAAAGGGGGAGCCAG +
Preference number: 6 (lower is better)
Translates to: RPPHPPLPGRDP*ALLLSAQRGSQ
Trigger: CTGGCTCCCCCTTTGAGCGGAGAGAAGCAGGGCCCAAGGGTCCCTGCCCGGGAGAGGAGGGTGAGGGGGTCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS TCA 72 bp CCGCCCTCCCAGAGCCAAAGGGCTTGCCGGCTCGCTTaGGTTTGCGGCGGCAGAGGGCTGCCAACTCGGGCA +
Preference number: 6 (lower is better)
Translates to: PPSQSQRACRLA*VCGGRGLPTRA
Trigger: TGCCCGAGTTGGCAGCCCTCTGCCGCCGCAAACTCAAGCGAGCCGGCAAGCCCTTTGGCTCTGGGAGGGCGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS GCA 72 bp CTCACCCTCCTCTCCCGGGCAGGGACCCTTGGGCCCTaGTTCTCTCCGCTCAAAGGGGGAGCCAGCCACAGG +
Preference number: 6 (lower is better)
Translates to: LTLLSRAGTLGP*FSPLKGGASHR
Trigger: CCTGTGGCTGGCTCCCCCTTTGAGCGGAGAGAAGCAGGGCCCAAGGGTCCCTGCCCGGGAGAGGAGGGTGAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS GCA 72 bp CCTGCCGGTACATGTAGTGGGCGCTGGCATGGCCGCTaGCCCCCTCGCTCCCGCTCTGCGCACTGTCTTCAC +
Preference number: 6 (lower is better)
Translates to: PAGTCSGRWHGR*PPRSRSAHCLH
Trigger: GTGAAGACAGTGCGCAGAGCGGGAGCGAGGGGGGCAGCGGCCATGCCAGCGCCCACTACATGTACCGGCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS CCA 72 bp ACGGGAGGAGCAGAGGCCGCAGGGGGCGAGCCATGTTaGCTGTCGCTCAGCTGGGCTGCGTCATCGGGAGTG +
Preference number: 6 (lower is better)
Translates to: TGGAEAAGGEPC*LSLSWAASSGV
Trigger: CACTCCCGATGACGCAGCCCAGCTGAGCGACAGCCAACATGGCTCGCCCCCTGCGGCCTCTGCTCCTCCCGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS CCA 72 bp CGGGGAGCAAGGTGGCAGAGGGCGCCCGCGGGTCTTTaGCTTCTAGGAGGGGGAGGTGTGCATGCGCAGGTG +
Preference number: 6 (lower is better)
Translates to: RGARWQRAPAGL*LLGGGGVHAQV
Trigger: CACCTGCGCATGCACACCTCCCCCTCCTAGAAGCCAAAGACCCGCGGGCGCCCTCTGCCACCTTGCTCCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS CAA 72 bp CCGGGGAGCAAGGTGGCAGAGGGCGCCCGCGGGTCTTaGGCTTCTAGGAGGGGGAGGTGTGCATGCGCAGGT +
Preference number: 6 (lower is better)
Translates to: PGSKVAEGARGS*ASRRGRCACAG
Trigger: ACCTGCGCATGCACACCTCCCCCTCCTAGAAGCCAAAGACCCGCGGGCGCCCTCTGCCACCTTGCTCCCCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS CAA 90 bp ACTGTTGGCAACGGGAGGAGCAGAGGCCGCAGGGGGCGAGCCATGTaGGCTGTCGCTCAGCTGGGCTGCGTCATCGGGAGTGAGGTGGGG +
Preference number: 6 (lower is better)
Translates to: TVGNGRSRGRRGRAM*AVAQLGCVIGSEVG
Trigger: CCCCACCTCACTCCCGATGACGCAGCCCAGCTGAGCGACAGCCAACATGGCTCGCCCCCTGCGGCCTCTGCTCCTCCCGTTGCCAACAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS GCA 72 bp CTTGCCGGCTCGCTTGAGTTTGCGGCGGCAGAGGGCTaGCAACTCGGGCAGCTGGAGGTAGCTGGCGGCAGT +
Preference number: 6 (lower is better)
Translates to: LAGSLEFAAAEG*QLGQLEVAGGS
Trigger: ACTGCCGCCAGCTACCTCCAGCTGCCCGAGTTGGCAGCCCTCTGCCGCCGCAAACTCAAGCGAGCCGGCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS GCA 72 bp GGCTCCTTCTTGCCCCACTCCTTCTTCCGAGTGGAGTaGCGGAGGCTCTTCCGAGGCTGCCCACCAGGCGCC +
Preference number: 6 (lower is better)
Translates to: GSFLPHSFFRVE*RRLFRGCPPGA
Trigger: GGCGCCTGGTGGGCAGCCTCGGAAGAGCCTCCGGCACTCCACTCGGAAGAAGGAGTGGGGCAAGAAGGAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS CAA 72 bp CTCCCAGAGCCAAAGGGCTTGCCGGCTCGCTTGAGTTaGCGGCGGCAGAGGGCTGCCAACTCGGGCAGCTGG +
Preference number: 6 (lower is better)
Translates to: LPEPKGLPARLS*RRQRAANSGSW
Trigger: CCAGCTGCCCGAGTTGGCAGCCCTCTGCCGCCGCAAACTCAAGCGAGCCGGCAAGCCCTTTGGCTCTGGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS CAA 72 bp CCCCTTGCGCCCATCCACGAGCCCCTGATACCGAGCTaGGATGACAGAGGCCGTGGACAGCCGCTGGCTGCG +
Preference number: 6 (lower is better)
Translates to: PLAPIHEPLIPS*DDRGRGQPLAA
Trigger: CGCAGCCAGCGGCTGTCCACGGCCTCTGTCATCCAAGCTCGGTATCAGGGGCTCGTGGATGGGCGCAAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS GCA 72 bp TTCTTCCGAGTGGAGTGCCGGAGGCTCTTCCGAGGCTaGCCACCAGGCGCCTCCAGCAGGCTCAGGTGGTTG +
Preference number: 6 (lower is better)
Translates to: FFRVECRRLFRG*PPGASSRLRWL
Trigger: CAACCACCTGAGCCTGCTGGAGGCGCCTGGTGGGCAGCCTCGGAAGAGCCTCCGGCACTCCACTCGGAAGAA
67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS GCA 72 bp TCCGCTCAAAGGGGGAGCCAGCCACAGGCTCCTTCTTaGCCCACTCCTTCTTCCGAGTGGAGTGCCGGAGGC +
Preference number: 6 (lower is better)
Translates to: SAQRGSQPQAPS*PTPSSEWSAGG
Trigger: GCCTCCGGCACTCCACTCGGAAGAAGGAGTGGGGCAAGAAGGAGCCTGTGGCTGGCTCCCCCTTTGAGCGGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS CAA 90 bp CCTGCTTCTCTCCGCTCAAAGGGGGAGCCAGCCACAGGCTCCTTCTaGCCCCACTCCTTCTTCCGAGTGGAGTGCCGGAGGCTCTTCCGA +
Preference number: 6 (lower is better)
Translates to: PASLRSKGEPATGSF*PHSFFRVECRRLFR
Trigger: TCGGAAGAGCCTCCGGCACTCCACTCGGAAGAAGGAGTGGGGCAAGAAGGAGCCTGTGGCTGGCTCCCCCTTTGAGCGGAGAGAAGCAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2
CDS CCA 72 bp GGGCAGACAGCCCGGCCCAGACCTTGCACGCTATCCTaGTTAGAGCCACCAAGAAAGAGTTCATCGTCTGAG +
Preference number: 6 (lower is better)
Translates to: GQTARPRPCTLS*LEPPRKSSSSE
Trigger: CTCAGACGATGAACTCTTTCTTGGTGGCTCTAACCAGGATAGCGTGCAAGGTCTGGGCCGGGCTGTCTGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000407464.7
ENST00000407598.2
ENST00000443632.2