RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HIC1 (Homo sapiens)

Ensembl gene IDs: ENSG00000177374

Ensembl transcript IDs: ENST00000322941.3, ENST00000399849.4, ENST00000571875.2, ENST00000571990.1, ENST00000574370.1, ENST00000576444.1, ENST00000619757.5

Found 535 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAGCTAAGGCACGAAGCAGTGAGGCCAGGTGAGGCCGCCGAGAGGTaGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTG +
Preference number: 1 (lower is better)
Translates to: ELRHEAVRPGEAAER*SRHCGDAAVVPGTV
Trigger: CACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTCACCTGGCCTCACTGCTTCGTGCCTTAGCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR CCA 90 bp GGAGGCAGGTCCAAGCCTCTGCACCTGTGTGAGGGTGGCCCTTTCTaGCTCCTCCACCCAGCGGGCGCAGCCCATCCAGGTCCTTGTGCA +
Preference number: 1 (lower is better)
Translates to: GGRSKPLHLCEGGPF*LLHPAGAAHPGPCA
Trigger: TGCACAAGGACCTGGATGGGCTGCGCCCGCTGGGTGGAGGAGCCAGAAAGGGCCACCCTCACACAGGTGCAGAGGCTTGGACCTGCCTCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR GCA 90 bp GCCCCTCCCAAGGATCGGGCGGAAGCTGCTGGGACCCTCCTGGGCTaGCAGGATTTAGCAGGGAGGTGGCTGGCTACAGCAACAGCAGCT +
Preference number: 1 (lower is better)
Translates to: APPKDRAEAAGTLLG*QDLAGRWLATATAA
Trigger: AGCTGCTGTTGCTGTAGCCAGCCACCTCCCTGCTAAATCCTGGCAGCCCAGGAGGGTCCCAGCAGCTTCCGCCCGATCCTTGGGAGGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR GCA 90 bp AACCATCCTCTTCCAACCCACGCCACGGCCATGCTGTGGGGGACCTaGTCCTCACAGAGCCCCTCCCAAGGATCGGGCGGAAGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: NHPLPTHATAMLWGT*SSQSPSQGSGGSCW
Trigger: CCAGCAGCTTCCGCCCGATCCTTGGGAGGGGCTCTGTGAGGAGCAGGTCCCCCACAGCATGGCCGTGGCGTGGGTTGGAAGAGGATGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR GCA 90 bp GCTGATCTGTTTCTGGGACTGGGGAGGGAGGCAGGTCCAAGCCTCTaGACCTGTGTGAGGGTGGCCCTTTCTGGCTCCTCCACCCAGCGG +
Preference number: 1 (lower is better)
Translates to: ADLFLGLGREAGPSL*TCVRVALSGSSTQR
Trigger: CCGCTGGGTGGAGGAGCCAGAAAGGGCCACCCTCACACAGGTGCAGAGGCTTGGACCTGCCTCCCTCCCCAGTCCCAGAAACAGATCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR TCA 90 bp GAAACCCCTGCAGACCCCTGCCAGCAATGTCGGGCCTTGGTTAGCTaGCCTAAGGCCTGGGACGCTCCTGGTTTGAGGCCCAGGGCAGGA +
Preference number: 1 (lower is better)
Translates to: ETPADPCQQCRALVS*PKAWDAPGLRPRAG
Trigger: TCCTGCCCTGGGCCTCAAACCAGGAGCGTCCCAGGCCTTAGGTCAGCTAACCAAGGCCCGACATTGCTGGCAGGGGTCTGCAGGGGTTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR GCA 90 bp CCCCGCCAGCCCACGCAGTCAGTGAGCACAGCAGGACACTTCCTGTaGCTTGCTGTCTGCCGGACCTGGACCTCTGTCAGGAAATGCCCA +
Preference number: 1 (lower is better)
Translates to: PRQPTQSVSTAGHFL*LAVCRTWTSVRKCP
Trigger: TGGGCATTTCCTGACAGAGGTCCAGGTCCGGCAGACAGCAAGGCACAGGAAGTGTCCTGCTGTGCTCACTGACTGCGTGGGCTGGCGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR TCA 90 bp CGGCTCCTGTGCTGGGAGAAACTTCCAGGCGTGGACAGCCCAGCCTaGGGCATTCCAGTGCTGGGGCACCGTCGCCTAACCTGGTTTCTA +
Preference number: 1 (lower is better)
Translates to: RLLCWEKLPGVDSPA*GIPVLGHRRLTWFL
Trigger: TAGAAACCAGGTTAGGCGACGGTGCCCCAGCACTGGAATGCCTCAGGCTGGGCTGTCCACGCCTGGAAGTTTCTCCCAGCACAGGAGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR TCA 90 bp GTCTGCCGGACCTGGACCTCTGTCAGGAAATGCCCAGCCTGGGACTaGCGAGTAGACCTGCCACCCAAGCAGGCCTGTCAGGGTAGGGAT +
Preference number: 1 (lower is better)
Translates to: VCRTWTSVRKCPAWD*RVDLPPKQACQGRD
Trigger: ATCCCTACCCTGACAGGCCTGCTTGGGTGGCAGGTCTACTCGTCAGTCCCAGGCTGGGCATTTCCTGACAGAGGTCCAGGTCCGGCAGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR GCA 90 bp GCTGGCTACAGCAACAGCAGCTGGGCAAGCCAGATAGGCCGCCCATaGTCTCAGCCTTTCTCCCTCCCCCGTCTCATTCCAAGGCTGAGG +
Preference number: 1 (lower is better)
Translates to: AGYSNSSWASQIGRP*SQPFSLPRLIPRLR
Trigger: CCTCAGCCTTGGAATGAGACGGGGGAGGGAGAAAGGCTGAGAGCATGGGCGGCCTATCTGGCTTGCCCAGCTGCTGTTGCTGTAGCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR GCA 90 bp CCAGCCCACGCAGTCAGTGAGCACAGCAGGACACTTCCTGTGCCTTaGTGTCTGCCGGACCTGGACCTCTGTCAGGAAATGCCCAGCCTG +
Preference number: 1 (lower is better)
Translates to: PAHAVSEHSRTLPVP*CLPDLDLCQEMPSL
Trigger: CAGGCTGGGCATTTCCTGACAGAGGTCCAGGTCCGGCAGACAGCAAGGCACAGGAAGTGTCCTGCTGTGCTCACTGACTGCGTGGGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR CCA 90 bp CGGACGGAGGAAAGGACTGGTAGAAGAGCCAAGACACGGCTAGCGTaGCACCCCCTCCCCAGGACCACATTCTCCAGGGTGAGAAGAGCA +
Preference number: 1 (lower is better)
Translates to: RTEERTGRRAKTRLA*HPLPRTTFSRVRRA
Trigger: TGCTCTTCTCACCCTGGAGAATGTGGTCCTGGGGAGGGGGTGCCACGCTAGCCGTGTCTTGGCTCTTCTACCAGTCCTTTCCTCCGTCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR TCA 90 bp AGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTTGACGGATaGCCGGAACCTGCGTGTGAAGGCGCTCACAAGGAATGTTCCTGT +
Preference number: 1 (lower is better)
Translates to: RGANPATAGGGAVDG*PEPACEGAHKECSC
Trigger: ACAGGAACATTCCTTGTGAGCGCCTTCACACGCAGGTTCCGGTCATCCGTCAACAGCACCACCTCCCGCAGTAGCCGGATTGGCTCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR GCA 90 bp ATCCACCCCAGACTTACCACACACCCTTCCTGCTGCTCCTCTTCCTaGCCTTATCAACCTGGGTCCCTCACACTTCGCCAGTTGCGTCCC +
Preference number: 1 (lower is better)
Translates to: IHPRLTTHPSCCSSS*PYQPGSLTLRQLRP
Trigger: GGGACGCAACTGGCGAAGTGTGAGGGACCCAGGTTGATAAGGGCAGGAAGAGGAGCAGCAGGAAGGGTGTGTGGTAAGTCTGGGGTGGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR CCA 90 bp TTACTTAGCAGGGGCGACCGGTTGGCCAAAGCCTTGGTGTGCCCTTaGCACAATTCTGCCAAGACCCTTACCCTCTCCTCTCCTCAGGGC +
Preference number: 1 (lower is better)
Translates to: LLSRGDRLAKALVCP*HNSAKTLTLSSPQG
Trigger: GCCCTGAGGAGAGGAGAGGGTAAGGGTCTTGGCAGAATTGTGCCAAGGGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGCTAAGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR GCA 90 bp CCTCTTCCTGCCCTTATCAACCTGGGTCCCTCACACTTCGCCAGTTaGGTCCCCGTGGACAGTCATGAGTCTAGAGGAAAGGGGCATCTG +
Preference number: 1 (lower is better)
Translates to: PLPALINLGPSHFAS*VPVDSHESRGKGHL
Trigger: CAGATGCCCCTTTCCTCTAGACTCATGACTGTCCACGGGGACGCAACTGGCGAAGTGTGAGGGACCCAGGTTGATAAGGGCAGGAAGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR GCA 90 bp CTGAAAGGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTaGCTGAGCCACCAATCCACCCAGACAATAAACCATCCTCTTCCA +
Preference number: 1 (lower is better)
Translates to: LKGHQAPSVARKMPT*LSHQSTQTINHPLP
Trigger: TGGAAGAGGATGGTTTATTGTCTGGGTGGATTGGTGGCTCAGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGGCCTTTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR GCA 90 bp ACCTCTTCTACCATCCACCCCAGACTTACCACACACCCTTCCTGCTaGTCCTCTTCCTGCCCTTATCAACCTGGGTCCCTCACACTTCGC +
Preference number: 1 (lower is better)
Translates to: TSSTIHPRLTTHPSC*SSSCPYQPGSLTLR
Trigger: GCGAAGTGTGAGGGACCCAGGTTGATAAGGGCAGGAAGAGGAGCAGCAGGAAGGGTGTGTGGTAAGTCTGGGGTGGATGGTAGAAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR GCA 90 bp TTACTGTTACTTAGCAGGGGCGACCGGTTGGCCAAAGCCTTGGTGTaGCCTTGGCACAATTCTGCCAAGACCCTTACCCTCTCCTCTCCT +
Preference number: 1 (lower is better)
Translates to: LLLLSRGDRLAKALV*PWHNSAKTLTLSSP
Trigger: AGGAGAGGAGAGGGTAAGGGTCTTGGCAGAATTGTGCCAAGGGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGCTAAGTAACAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR CCA 90 bp ATGGATTACTGTTACTTAGCAGGGGCGACCGGTTGGCCAAAGCCTTaGTGTGCCCTTGGCACAATTCTGCCAAGACCCTTACCCTCTCCT +
Preference number: 1 (lower is better)
Translates to: MDYCYLAGATGWPKP*CALGTILPRPLPSP
Trigger: AGGAGAGGGTAAGGGTCTTGGCAGAATTGTGCCAAGGGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGCTAAGTAACAGTAATCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR CCA 90 bp TCGCCTGTATACATGGATTACTGTTACTTAGCAGGGGCGACCGGTTaGCCAAAGCCTTGGTGTGCCCTTGGCACAATTCTGCCAAGACCC +
Preference number: 1 (lower is better)
Translates to: SPVYMDYCYLAGATG*PKPWCALGTILPRP
Trigger: GGGTCTTGGCAGAATTGTGCCAAGGGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGCTAAGTAACAGTAATCCATGTATACAGGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR TCA 90 bp ACCTGCCACCCAAGCAGGCCTGTCAGGGTAGGGATGTCACTTGTGTaGGTGCTTGTCCCTGGCTTAAATTCTCTCCAATGTGTTAAAGAT +
Preference number: 1 (lower is better)
Translates to: TCHPSRPVRVGMSLV*VLVPGLNSLQCVKD
Trigger: ATCTTTAACACATTGGAGAGAATTTAAGCCAGGGACAAGCACTCACACAAGTGACATCCCTACCCTGACAGGCCTGCTTGGGTGGCAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR CCA 90 bp CCTTTCATCTTCAGAACCTCTGTCGTGAATGTGTTCAAGAGGCTTTaGTTAAGTCAGGAAGAAGTGCCCAGGGTGTGTGTCCCCAGTCTC +
Preference number: 1 (lower is better)
Translates to: PFIFRTSVVNVFKRL*LSQEEVPRVCVPSL
Trigger: GAGACTGGGGACACACACCCTGGGCACTTCTTCCTGACTTAACCAAAGCCTCTTGAACACATTCACGACAGAGGTTCTGAAGATGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR CAA 90 bp GTGAGGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTaGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCGCCGCTCCC +
Preference number: 2 (lower is better)
Translates to: VRPPRGGAATVATLR*SRAQWALRAAPAAP
Trigger: GGGAGCGGCGGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTCAC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR CCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGGAGGCCGCCGAGAGGTaGAGCCGCCACTGTGGCGAC +
Preference number: 2 (lower is better)
Translates to: PGPQGREGRAPREWETWWEAAER*SRHCGD
Trigger: GTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTC...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR GCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGCCCACTCCCCAACTCTaGCCGACGCTCCGACCCCAG +
Preference number: 2 (lower is better)
Translates to: PGPQGREGRAPREWETWWPTPQL*PTLRPQ
Trigger: CTGGGGTCGGAGCGTCGGGCAGAGTTGGGGAGTGGG...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR GCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGCCACTGTGGCGACGCTaGGGTTGTCCCGGGCACAGT +
Preference number: 2 (lower is better)
Translates to: PGPQGREGRAPREWETWWPLWRR*GCPGHS
Trigger: ACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGG...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR CCA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGTTATCAGTCCCGGGGTaGGTGGGAGCGGGGGTGCGG +
Preference number: 2 (lower is better)
Translates to: EGAKETAFQPSPAWARDGLSVPG*VGAGVR
Trigger: CCGCACCCCCGCTCCCACCCACCCCGGGACTGATAA...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR CCA 90 bp GGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGCCACCAAGTGGAGCCGCCACTGTaGCGACGCTGCGGTTGTCCC +
Preference number: 2 (lower is better)
Translates to: GHQAPSVARKMPTCLSHQVEPPL*RRCGCP
Trigger: GGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCAC...TTGGTGGCTCAGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CCA 90 bp CAGAGCCCCTCCCAAGGATCGGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGAGGGCCTTCTCGCCTaGGGACGCAGCCACTTTCTC +
Preference number: 2 (lower is better)
Translates to: QSPSQGSGGSCWDPPGLPEGLLA*GRSHFL
Trigger: GAGAAAGTGGCTGCGTCCCCAGGCGAGAAGGCCCTC...TGGCAGCCCAGGAGGGTCCCAGCAGCTTCCGCCCGATCCTTGGGAGGGGCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR TCA 90 bp CAGAGCCCCTCCCAAGGATCGGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGTCTCATTCCAAGGCTaGGGGAGGGCCTTCTCGCCT +
Preference number: 2 (lower is better)
Translates to: QSPSQGSGGSCWDPPGLPVSFQG*GRAFSP
Trigger: AGGCGAGAAGGCCCTCCCTCAGCCTTGGAATGAGAC...TGGCAGCCCAGGAGGGTCCCAGCAGCTTCCGCCCGATCCTTGGGAGGGGCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CCA 90 bp GAGCCCCTCCCAAGGATCGGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGGTACAGCAACAGCAGCTaGGCAAGCCAGATAGGCCGC +
Preference number: 2 (lower is better)
Translates to: EPLPRIGRKLLGPSWAARYSNSS*ASQIGR
Trigger: GCGGCCTATCTGGCTTGCCCAGCTGCTGTTGCTGTA...CCTGGCAGCCCAGGAGGGTCCCAGCAGCTTCCGCCCGATCCTTGGGAGGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR TCA 90 bp GGTGGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGAGCAGTGAGGCCAGGTaGGGCCGCCGAGAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: GGRLFAFRLQNSPPLVTESSEAR*GRREVE
Trigger: CTCCACCTCTCGGCGGCCTCACCTGGCCTCACTGCT...CTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR GCA 90 bp GTTCCTGAAAGGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTCCCACGCCACGGCCATaGTGTGGGGGACCTGCTCCT +
Preference number: 2 (lower is better)
Translates to: VPERPPGAQCSTEDAHVPPTPRP*CGGPAP
Trigger: AGGAGCAGGTCCCCCACAGCATGGCCGTGGCGTGGG...AGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGGCCTTTCAGGAAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CCA 90 bp GGTGGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGTGGAGCCGCCACTGTaGCGACGCTGCGGTTGTCCC +
Preference number: 2 (lower is better)
Translates to: GGRLFAFRLQNSPPLVTEVEPPL*RRCGCP
Trigger: GGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCAC...CTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR CCA 90 bp TCTCATGCCCACAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTTGACGAGGCCGCCGAGAGGTaGAGCCGCCACTGTGGCGAC +
Preference number: 2 (lower is better)
Translates to: SHAHRGANPATAGGGAVDEAAER*SRHCGD
Trigger: GTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTC...GTCAACAGCACCACCTCCCGCAGTAGCCGGATTGGCTCCTCTGTGGGCATGAGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CCA 90 bp AAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTAGGCTCTTCGCCTGAGGCGGGAGGGGCCTaGGGTCTCCTTTGGTCAAAG +
Preference number: 2 (lower is better)
Translates to: KGREGTAGVGDLVVGSSPEAGGA*GLLWSK
Trigger: CTTTGACCAAAGGAGACCCCAGGCCCCTCCCGCCTC...AGGCGAAGAGCCTACCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR CCA 90 bp CAGAGCCCCTCCCAAGGATCGGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCACCTTGCCCCTTTAGCTaGTACCTCAGTGGGGAGGCT +
Preference number: 2 (lower is better)
Translates to: QSPSQGSGGSCWDPPGLPPCPFS*YLSGEA
Trigger: AGCCTCCCCACTGAGGTACCAGCTAAAGGGGCAAGG...TGGCAGCCCAGGAGGGTCCCAGCAGCTTCCGCCCGATCCTTGGGAGGGGCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR TCA 90 bp CTGAGAGCCCGGACGGAGGAAAGGACTGGTAGAAGAGCCAAGACACGGCTAGCGAGCAGTGAGGCCAGGTaGGGCCGCCGAGAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: LRARTEERTGRRAKTRLASSEAR*GRREVE
Trigger: CTCCACCTCTCGGCGGCCTCACCTGGCCTCACTGCT...CGCTAGCCGTGTCTTGGCTCTTCTACCAGTCCTTTCCTCCGTCCGGGCTCTCAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR GCA 90 bp CCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGCCACCAATCGCAGGTCCAAGCCTCTaGACCTGTGTGAGGGTGGCC +
Preference number: 2 (lower is better)
Translates to: PPGAQCSTEDAHVPEPPIAGPSL*TCVRVA
Trigger: GGCCACCCTCACACAGGTGCAGAGGCTTGGACCTGC...GATTGGTGGCTCAGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR CAA 90 bp CCTGGTGGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTaGGTGACTGAGGAAGGAAGGGTTGGCCCTGGGGCTAGTGCCACT +
Preference number: 2 (lower is better)
Translates to: PGGRLFAFRLQNSPP*VTEEGRVGPGASAT
Trigger: AGTGGCACTAGCCCCAGGGCCAACCCTTCCTTCCTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACCACCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR TCA 90 bp TCTCATGCCCACAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTTGACCAGCTGGAAGGCCGATaGCTGGGTGGTCGGGAGGGA +
Preference number: 2 (lower is better)
Translates to: SHAHRGANPATAGGGAVDQLEGR*LGGREG
Trigger: TCCCTCCCGACCACCCAGTCATCGGCCTTCCAGCTG...GTCAACAGCACCACCTCCCGCAGTAGCCGGATTGGCTCCTCTGTGGGCATGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR GCA 90 bp TACTGTTACTTAGCAGGGGCGACCGGTTGGCCAAAGCCTTGGTGTGCCCTTGGCCCCACTCCCCAACTCTaGCCGACGCTCCGACCCCAG +
Preference number: 2 (lower is better)
Translates to: YCYLAGATGWPKPWCALGPTPQL*PTLRPQ
Trigger: CTGGGGTCGGAGCGTCGGGCAGAGTTGGGGAGTGGG...GCCAAGGGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGCTAAGTAACAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR TCA 90 bp AAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTAGGCTCTTCGCCTCGGGGAGATTCACAGTaGGAATGGGTGTGGTCGCAA +
Preference number: 2 (lower is better)
Translates to: KGREGTAGVGDLVVGSSPRGDSQ*EWVWSQ
Trigger: TTGCGACCACACCCATTCTCACTGTGAATCTCCCCG...AGGCGAAGAGCCTACCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR GCA 90 bp CTGTCCTCAGTGACAGCCTTCTGCTCTCTCATGCCCACAGAGGAGCCAATCCGGCCACTGTGGCGACGCTaGGGTTGTCCCGGGCACAGT +
Preference number: 2 (lower is better)
Translates to: LSSVTAFCSLMPTEEPIRPLWRR*GCPGHS
Trigger: ACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGG...CCGGATTGGCTCCTCTGTGGGCATGAGAGAGCAGAAGGCTGTCACTGAGGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CCA 90 bp CTGAGAGCCCGGACGGAGGAAAGGACTGGTAGAAGAGCCAAGACACGGCTAGCGTGGAAGGCCGATGACTaGGTGGTCGGGAGGGAGACC +
Preference number: 2 (lower is better)
Translates to: LRARTEERTGRRAKTRLAWKADD*VVGRET
Trigger: GGTCTCCCTCCCGACCACCCAGTCATCGGCCTTCCA...CGCTAGCCGTGTCTTGGCTCTTCTACCAGTCCTTTCCTCCGTCCGGGCTCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CCA 90 bp CAGAGCCCCTCCCAAGGATCGGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCACCTCTCTACTACCCATaGCAGGAACCTAGTACAGGT +
Preference number: 2 (lower is better)
Translates to: QSPSQGSGGSCWDPPGLPPLYYP*QEPSTG
Trigger: ACCTGTACTAGGTTCCTGCCATGGGTAGTAGAGAGG...TGGCAGCCCAGGAGGGTCCCAGCAGCTTCCGCCCGATCCTTGGGAGGGGCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR TCA 90 bp CCTTATCAACCTGGGTCCCTCACACTTCGCCAGTTGCGTCCCCGTGGACAGTCAGCCTCTGCACCTGTGTaGGGGTGGCCCTTTCTGGCT +
Preference number: 2 (lower is better)
Translates to: PYQPGSLTLRQLRPRGQSASAPV*GWPFLA
Trigger: AGCCAGAAAGGGCCACCCTCACACAGGTGCAGAGGC...TGACTGTCCACGGGGACGCAACTGGCGAAGTGTGAGGGACCCAGGTTGATAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR GCA 90 bp TCTCATGCCCACAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTTGACAGCCCATGGCCTGACTaGACAGCCTGCCTGGAGGAT +
Preference number: 2 (lower is better)
Translates to: SHAHRGANPATAGGGAVDSPWPD*TACLED
Trigger: ATCCTCCAGGCAGGCTGTGCAGTCAGGCCATGGGCT...GTCAACAGCACCACCTCCCGCAGTAGCCGGATTGGCTCCTCTGTGGGCATGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR GCA 90 bp TCTCATGCCCACAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTTGACCGGAAGATGCCCACGTaGCTGAGCCACCAATCCACC +
Preference number: 2 (lower is better)
Translates to: SHAHRGANPATAGGGAVDRKMPT*LSHQST
Trigger: GGTGGATTGGTGGCTCAGGCACGTGGGCATCTTCCG...GTCAACAGCACCACCTCCCGCAGTAGCCGGATTGGCTCCTCTGTGGGCATGAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CCA 90 bp CTGTCCTCAGTGACAGCCTTCTGCTCTCTCATGCCCACAGAGGAGCCAATCCGGGAGGCGGGAGGGGCCTaGGGTCTCCTTTGGTCAAAG +
Preference number: 2 (lower is better)
Translates to: LSSVTAFCSLMPTEEPIREAGGA*GLLWSK
Trigger: CTTTGACCAAAGGAGACCCCAGGCCCCTCCCGCCTC...CCGGATTGGCTCCTCTGTGGGCATGAGAGAGCAGAAGGCTGTCACTGAGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CCA 90 bp CTGTCCTCAGTGACAGCCTTCTGCTCTCTCATGCCCACAGAGGAGCCAATCCGGACTGCACAGCCTGCCTaGAGGATGGGTGCGCAGCTC +
Preference number: 2 (lower is better)
Translates to: LSSVTAFCSLMPTEEPIRTAQPA*RMGAQL
Trigger: GAGCTGCGCACCCATCCTCCAGGCAGGCTGTGCAGT...CCGGATTGGCTCCTCTGTGGGCATGAGAGAGCAGAAGGCTGTCACTGAGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR CAA 90 bp ATGCCCACAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTaGACGGATGACCGGAACCTGCGTGTGAAGGCGCTCACAAGGAAT +
Preference number: 2 (lower is better)
Translates to: MPTEEPIRLLREVVL*TDDRNLRVKALTRN
Trigger: ATTCCTTGTGAGCGCCTTCACACGCAGGTTCCGGTCATCCGTCAACAGCACCACCTCCCGCAGTAGCCGGATTGGCTCCTCTGTGGGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR TCA 90 bp CTGAGAGCCCGGACGGAGGAAAGGACTGGTAGAAGAGCCAAGACACGGCTAGCGACCGGAACCTGCGTGTaGAGGCGCTCACAAGGAATG +
Preference number: 2 (lower is better)
Translates to: LRARTEERTGRRAKTRLATGTCV*RRSQGM
Trigger: CATTCCTTGTGAGCGCCTTCACACGCAGGTTCCGGT...CGCTAGCCGTGTCTTGGCTCTTCTACCAGTCCTTTCCTCCGTCCGGGCTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CCA 90 bp TACTGTTACTTAGCAGGGGCGACCGGTTGGCCAAAGCCTTGGTGTGCCCTTGGCCCTCGGCTCCTGTGCTaGGAGAAACTTCCAGGCGTG +
Preference number: 2 (lower is better)
Translates to: YCYLAGATGWPKPWCALGPRLLC*EKLPGV
Trigger: CACGCCTGGAAGTTTCTCCCAGCACAGGAGCCGAGG...GCCAAGGGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGCTAAGTAACAGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR TCA 90 bp AAGATTCTCTCCCCAGCTGGAAGGCCGATGACTGGGTGGTCGGGAGGGAGACCCTACCTGACCTCTTGCTaGTCTGTTTCTGGGACTGGG +
Preference number: 2 (lower is better)
Translates to: KILSPAGRPMTGWSGGRPYLTSC*SVSGTG
Trigger: CCCAGTCCCAGAAACAGATCAGCAAGAGGTCAGGTA...GGGTCTCCCTCCCGACCACCCAGTCATCGGCCTTCCAGCTGGGGAGAGAATCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CCA 90 bp GTTCCTGAAAGGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGATTTAGCAGGGAGGTaGCTGGCTACAGCAACAGCA +
Preference number: 2 (lower is better)
Translates to: VPERPPGAQCSTEDAHVPDLAGR*LATATA
Trigger: TGCTGTTGCTGTAGCCAGCCACCTCCCTGCTAAATC...AGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGGCCTTTCAGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR CAA 90 bp TCCCTCAGTTTAGGGTCCTGGGAGGCTGACGGGTTTGGGCAGCTTTaGGGAACTAGGCAGAAGAGAGTCCTGTATGGGAGGCCGGAGTCA +
Preference number: 2 (lower is better)
Translates to: SLSLGSWEADGFGQL*GTRQKRVLYGRPES
Trigger: TGACTCCGGCCTCCCATACAGGACTCTCTTCTGCCTAGTTCCCAAAAGCTGCCCAAACCCGTCAGCCTCCCAGGACCCTAAACTGAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR TCA 90 bp GGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGTAGGAGCAGTGAGGCCAGGTaGGGCCGCCGAGAGGTGGAG +
Preference number: 2 (lower is better)
Translates to: GSSIENGSGSGRACVQGRSSEAR*GRREVE
Trigger: CTCCACCTCTCGGCGGCCTCACCTGGCCTCACTGCT...CCTACCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR TCA 90 bp CTGTCCTCAGTGACAGCCTTCTGCTCTCTCATGCCCACAGAGGAGCCAATCCGGACAGGGCAGGGGTTCTaGGTTTCCGTCAGATGCAGT +
Preference number: 2 (lower is better)
Translates to: LSSVTAFCSLMPTEEPIRTGQGF*VSVRCS
Trigger: ACTGCATCTGACGGAAACTCAGAACCCCTGCCCTGT...CCGGATTGGCTCCTCTGTGGGCATGAGAGAGCAGAAGGCTGTCACTGAGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CCA 90 bp AGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGCCTGGGGTCTCCTTTaGTCAAAGCTGATATCAAAA +
Preference number: 2 (lower is better)
Translates to: RRELKRPRSSPAQPGLGMAWGLL*SKLISK
Trigger: TTTTGATATCAGCTTTGACCAAAGGAGACCCCAGGC...CATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR CCA 90 bp GCTGGCTACAGCAACAGCAGCTGGGCAAGCCAGATAGGCCGCCCATGCTCTCAGAAATGGAAGCGGCTCTaGAAGAGCCTGTGTACAAGG +
Preference number: 2 (lower is better)
Translates to: AGYSNSSWASQIGRPCSQKWKRL*KSLCTR
Trigger: CCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTT...CTGAGAGCATGGGCGGCCTATCTGGCTTGCCCAGCTGCTGTTGCTGTAGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR TCA 90 bp AAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTAGGCTCTTCGCCTGCCACTTGTGCAAAATaGGGAACTTCACATTATCAG +
Preference number: 2 (lower is better)
Translates to: KGREGTAGVGDLVVGSSPATCAK*GTSHYQ
Trigger: CTGATAATGTGAAGTTCCTCATTTTGCACAAGTGGC...AGGCGAAGAGCCTACCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR CCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGGTGGAGCCGCCACTGTaGCGACGCTGCGGTTGTCCC +
Preference number: 2 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQVEPPL*RRCGCP
Trigger: GGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCAC...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR CCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGTTATCAGTCCCGGGGTaGGTGGGAGCGGGGGTGCGG +
Preference number: 2 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQLSVPG*VGAGVR
Trigger: CCGCACCCCCGCTCCCACCCACCCCGGGACTGATAA...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR CAA 90 bp CATGGATTACTGTTACTTAGCAGGGGCGACCGGTTGGCCAAAGCCTaGGTGTGCCCTTGGCACAATTCTGCCAAGACCCTTACCCTCTCC +
Preference number: 2 (lower is better)
Translates to: HGLLLLSRGDRLAKA*VCPWHNSAKTLTLS
Trigger: GGAGAGGGTAAGGGTCTTGGCAGAATTGTGCCAAGGGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGCTAAGTAACAGTAATCCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR TCA 90 bp CAGACCCCTGCCAGCAATGTCGGGCCTTGGTTAGCTGACCTAAGGCCTGGGACGTTCCGTCAGATGCAGTaGAATCACAGTTCCCTTTCA +
Preference number: 2 (lower is better)
Translates to: QTPASNVGPWLADLRPGTFRQMQ*NHSSLS
Trigger: TGAAAGGGAACTGTGATTTCACTGCATCTGACGGAA...CGTCCCAGGCCTTAGGTCAGCTAACCAAGGCCCGACATTGCTGGCAGGGGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR GCA 90 bp GGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGTAGGGGCCGCCGGGGCGCATaGAATAAATATGGTCCGGGG +
Preference number: 2 (lower is better)
Translates to: GSSIENGSGSGRACVQGRGRRGA*NKYGPG
Trigger: CCCCGGACCATATTTATTGCATGCGCCCCGGCGGCC...CCTACCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR GCA 90 bp CTTCCCTGGGGTACAAGACGGAGAACTGGGATCATCATCTTAACTCTACTCTTCCGGGTGGCCTCCACCTaGTCCCTCTCTCCTCACTGG +
Preference number: 2 (lower is better)
Translates to: LPWGTRRRTGIIILTLLFRVAST*SLSPHW
Trigger: CCAGTGAGGAGAGAGGGAGCAGGTGGAGGCCACCCG...GAAGAGTAGAGTTAAGATGATGATCCCAGTTCTCCGTCTTGTACCCCAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CCA 90 bp CCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGCCACCAATCGTGTTCAAGAGGCTTTaGTTAAGTCAGGAAGAAGTG +
Preference number: 2 (lower is better)
Translates to: PPGAQCSTEDAHVPEPPIVFKRL*LSQEEV
Trigger: CACTTCTTCCTGACTTAACCAAAGCCTCTTGAACAC...GATTGGTGGCTCAGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CCA 90 bp CTTCCCTGGGGTACAAGACGGAGAACTGGGATCATCATCTTAACTCTACTCTTCGCAGGGGCGACCGGTTaGCCAAAGCCTTGGTGTGCC +
Preference number: 2 (lower is better)
Translates to: LPWGTRRRTGIIILTLLFAGATG*PKPWCA
Trigger: GGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGC...GAAGAGTAGAGTTAAGATGATGATCCCAGTTCTCCGTCTTGTACCCCAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CCA 90 bp GTTTGGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGGAGGCGGGAGGGGCCTaGGGTCTCCTTTGGTCAAAG +
Preference number: 2 (lower is better)
Translates to: VWFEYRKWKRLWKSLCTREAGGA*GLLWSK
Trigger: CTTTGACCAAAGGAGACCCCAGGCCCCTCCCGCCTC...CCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR CAA 90 bp TTCGCCTGTATACATGGATTACTGTTACTTAGCAGGGGCGACCGGTaGGCCAAAGCCTTGGTGTGCCCTTGGCACAATTCTGCCAAGACC +
Preference number: 2 (lower is better)
Translates to: FACIHGLLLLSRGDR*AKALVCPWHNSAKT
Trigger: GGTCTTGGCAGAATTGTGCCAAGGGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGCTAAGTAACAGTAATCCATGTATACAGGCGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR TCA 90 bp GTTTGGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGACTCCCCGCCCTTGGTaGCTGAGGAAGGAAGGGTTG +
Preference number: 2 (lower is better)
Translates to: VWFEYRKWKRLWKSLCTRTPRPW*LRKEGL
Trigger: CAACCCTTCCTTCCTCAGTCACCAAGGGCGGGGAGT...CCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR TCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGACTCCCCGCCCTTGGTaGCTGAGGAAGGAAGGGTTG +
Preference number: 2 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQTPRPW*LRKEGL
Trigger: CAACCCTTCCTTCCTCAGTCACCAAGGGCGGGGAGT...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR CCA 90 bp GAGCGGTGTTGTGATCTGGGGGCCAGCCATGTGGTAAAAAGGAGTAGAGGTCAACGGGGTCGGGGTCCTTaGTTACTGCTTTATTGCTGT +
Preference number: 2 (lower is better)
Translates to: ERCCDLGASHVVKRSRGQRGRGP*LLLYCC
Trigger: ACAGCAATAAAGCAGTAACCAAGGACCCCGACCCCG...TTGACCTCTACTCCTTTTTACCACATGGCTGGCCCCCAGATCACAACACCGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR TCA 90 bp GTTTGGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGCGGGGAGATTCACAGTaGGAATGGGTGTGGTCGCAA +
Preference number: 2 (lower is better)
Translates to: VWFEYRKWKRLWKSLCTRRGDSQ*EWVWSQ
Trigger: TTGCGACCACACCCATTCTCACTGTGAATCTCCCCG...CCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR GCA 90 bp CAGACCCCTGCCAGCAATGTCGGGCCTTGGTTAGCTGACCTAAGGCCTGGGACGAATGAAAGATATCTGTaGCACTATAGCAAGACCTTT +
Preference number: 2 (lower is better)
Translates to: QTPASNVGPWLADLRPGTNERYL*HYSKTF
Trigger: AAAGGTCTTGCTATAGTGGCACAGATATCTTTCATT...CGTCCCAGGCCTTAGGTCAGCTAACCAAGGCCCGACATTGCTGGCAGGGGTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CCA 90 bp CTTCCCTGGGGTACAAGACGGAGAACTGGGATCATCATCTTAACTCTACTCTTCCCAGTTGCGTCCCCGTaGACAGTCATGAGTCTAGAG +
Preference number: 2 (lower is better)
Translates to: LPWGTRRRTGIIILTLLFPVASP*TVMSLE
Trigger: CTCTAGACTCATGACTGTCCACGGGGACGCAACTGG...GAAGAGTAGAGTTAAGATGATGATCCCAGTTCTCCGTCTTGTACCCCAGGGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR CAA 90 bp CCCTTTCATCTTCAGAACCTCTGTCGTGAATGTGTTCAAGAGGCTTaGGTTAAGTCAGGAAGAAGTGCCCAGGGTGTGTGTCCCCAGTCT +
Preference number: 2 (lower is better)
Translates to: PFHLQNLCRECVQEA*VKSGRSAQGVCPQS
Trigger: AGACTGGGGACACACACCCTGGGCACTTCTTCCTGACTTAACCAAAGCCTCTTGAACACATTCACGACAGAGGTTCTGAAGATGAAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CCA 90 bp AAGGAAGGGTTGGCCCTGGGGCTAGTGCCACTTGTGCAAAATGAGGAACTTCACGCCTGGGGTCTCCTTTaGTCAAAGCTGATATCAAAA +
Preference number: 2 (lower is better)
Translates to: KEGLALGLVPLVQNEELHAWGLL*SKLISK
Trigger: TTTTGATATCAGCTTTGACCAAAGGAGACCCCAGGC...GTGAAGTTCCTCATTTTGCACAAGTGGCACTAGCCCCAGGGCCAACCCTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR GCA 90 bp TACTCTTCTGTCCTCTTAGAGACTTTCGCCTGTATACATGGATTACTGTTACTTGGGACCCTCCTGGGCTaGCAGGATTTAGCAGGGAGG +
Preference number: 2 (lower is better)
Translates to: YSSVLLETFACIHGLLLLGTLLG*QDLAGR
Trigger: CCTCCCTGCTAAATCCTGGCAGCCCAGGAGGGTCCC...AAGTAACAGTAATCCATGTATACAGGCGAAAGTCTCTAAGAGGACAGAAGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR TCA 90 bp GGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGTAGGGCCACTTGTGCAAAATaGGGAACTTCACATTATCAG +
Preference number: 2 (lower is better)
Translates to: GSSIENGSGSGRACVQGRATCAK*GTSHYQ
Trigger: CTGATAATGTGAAGTTCCTCATTTTGCACAAGTGGC...CCTACCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR GCA 72 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTaGGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCG +
Preference number: 3 (lower is better)
Translates to: GRREVEPPLWRR*GCPGHSGPCAP
Trigger: CGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR CAA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGGTGGCGACGCTGCGGTaGTCCCGGGCACAGTGGGCC +
Preference number: 3 (lower is better)
Translates to: EGAKETAFQPSPAWARDGVATLR*SRAQWA
Trigger: GGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCAC...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR CCA 72 bp GACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATaGGGGGCCGCCGGGGCGCATGCAATAAATATGGTC +
Preference number: 3 (lower is better)
Translates to: DRVPAQPSLGSG*GAAGAHAINMV
Trigger: GACCATATTTATTGCATGCGCCCCGGCGGCCCCCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR GCA 72 bp GGTCTCCCACCCAGGGCCTTCCACCCTCGGCTCCTGTaGTGGGAGAAACTTCCAGGCGTGGACAGCCCAGCC +
Preference number: 3 (lower is better)
Translates to: GLPPRAFHPRLL*WEKLPGVDSPA
Trigger: GGCTGGGCTGTCCACGCCTGGAAGTTTCTCCCAGCACAGGAGCCGAGGGTGGAAGGCCCTGGGTGGGAGACC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR GCA 72 bp CTTCCAACCCACGCCACGGCCATGCTGTGGGGGACCTaGTCCTCACAGAGCCCCTCCCAAGGATCGGGCGGA +
Preference number: 3 (lower is better)
Translates to: LPTHATAMLWGT*SSQSPSQGSGG
Trigger: TCCGCCCGATCCTTGGGAGGGGCTCTGTGAGGAGCAGGTCCCCCACAGCATGGCCGTGGCGTGGGTTGGAAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CAA 90 bp GCTGGCTACAGCAACAGCAGCTGGGCAAGCCAGATAGGCCGCCCATGCTCTCAGCCCCTTCACCCCTCCTaGCCCGCCTACCCTCCCTCC +
Preference number: 3 (lower is better)
Translates to: AGYSNSSWASQIGRPCSQPLHPS*PAYPPS
Trigger: GGAGGGAGGGTAGGCGGGCAAGGAGGGGTGAAGGGG...CTGAGAGCATGGGCGGCCTATCTGGCTTGCCCAGCTGCTGTTGCTGTAGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR TCA 72 bp TGCCCGACGCTCCGACCCCAGCGGGGAGATTCACAGTaGGAATGGGTGTGGTCGCAAGGGCCGGAGGTAGGG +
Preference number: 3 (lower is better)
Translates to: CPTLRPQRGDSQ*EWVWSQGPEVG
Trigger: CCCTACCTCCGGCCCTTGCGACCACACCCATTCTCACTGTGAATCTCCCCGCTGGGGTCGGAGCGTCGGGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR GCA 72 bp GACCAGTGGGGGATACCCCAGAGCCCATGGCCTGACTaGACAGCCTGCCTGGAGGATGGGTGCGCAGCTCTG +
Preference number: 3 (lower is better)
Translates to: DQWGIPQSPWPD*TACLEDGCAAL
Trigger: CAGAGCTGCGCACCCATCCTCCAGGCAGGCTGTGCAGTCAGGCCATGGGCTCTGGGGTATCCCCCACTGGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CAA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGCAGAACTCCCCGCCCTaGGTGACTGAGGAAGGAAGG +
Preference number: 3 (lower is better)
Translates to: EGAKETAFQPSPAWARDGQNSPP*VTEEGR
Trigger: CCTTCCTTCCTCAGTCACCAAGGGCGGGGAGTTCTG...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR CCA 72 bp TCACAGAGCCCCTCCCAAGGATCGGGCGGAAGCTGCTaGGACCCTCCTGGGCTGCCAGGATTTAGCAGGGAG +
Preference number: 3 (lower is better)
Translates to: SQSPSQGSGGSC*DPPGLPGFSRE
Trigger: CTCCCTGCTAAATCCTGGCAGCCCAGGAGGGTCCCAGCAGCTTCCGCCCGATCCTTGGGAGGGGCTCTGTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR TCA 72 bp TGCTGGGAGAAACTTCCAGGCGTGGACAGCCCAGCCTaGGGCATTCCAGTGCTGGGGCACCGTCGCCTAACC +
Preference number: 3 (lower is better)
Translates to: CWEKLPGVDSPA*GIPVLGHRRLT
Trigger: GGTTAGGCGACGGTGCCCCAGCACTGGAATGCCTCAGGCTGGGCTGTCCACGCCTGGAAGTTTCTCCCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR TCA 72 bp GCAGACCCCTGCCAGCAATGTCGGGCCTTGGTTAGCTaGCCTAAGGCCTGGGACGCTCCTGGTTTGAGGCCC +
Preference number: 3 (lower is better)
Translates to: ADPCQQCRALVS*PKAWDAPGLRP
Trigger: GGGCCTCAAACCAGGAGCGTCCCAGGCCTTAGGTCAGCTAACCAAGGCCCGACATTGCTGGCAGGGGTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CAA 90 bp AAGGAAGGGTTGGCCCTGGGGCTAGTGCCACTTGTGCAAAATGAGGAACTTCACGTGGCGACGCTGCGGTaGTCCCGGGCACAGTGGGCC +
Preference number: 3 (lower is better)
Translates to: KEGLALGLVPLVQNEELHVATLR*SRAQWA
Trigger: GGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCAC...GTGAAGTTCCTCATTTTGCACAAGTGGCACTAGCCCCAGGGCCAACCCTTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR CCA 72 bp CCGTGGACAGTCATGAGTCTAGAGGAAAGGGGCATCTaGTCTCAGGCCCGTGCTCTCGGGTGGCCTCCACCT +
Preference number: 3 (lower is better)
Translates to: PWTVMSLEERGI*SQARALGWPPP
Trigger: AGGTGGAGGCCACCCGAGAGCACGGGCCTGAGACCAGATGCCCCTTTCCTCTAGACTCATGACTGTCCACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CAA 90 bp TCTCATGCCCACAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTTGACAGCCCATCCAGGTCCTaGTGCAGGGGCAGAAGAGAG +
Preference number: 3 (lower is better)
Translates to: SHAHRGANPATAGGGAVDSPSRS*CRGRRE
Trigger: CTCTCTTCTGCCCCTGCACAAGGACCTGGATGGGCT...GTCAACAGCACCACCTCCCGCAGTAGCCGGATTGGCTCCTCTGTGGGCATGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CAA 90 bp CTGAGAGCCCGGACGGAGGAAAGGACTGGTAGAAGAGCCAAGACACGGCTAGCGCTCACACTTCGCCAGTaGCGTCCCCGTGGACAGTCA +
Preference number: 3 (lower is better)
Translates to: LRARTEERTGRRAKTRLALTLRQ*RPRGQS
Trigger: TGACTGTCCACGGGGACGCAACTGGCGAAGTGTGAG...CGCTAGCCGTGTCTTGGCTCTTCTACCAGTCCTTTCCTCCGTCCGGGCTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR TCA 72 bp ACCTGGACCTCTGTCAGGAAATGCCCAGCCTGGGACTaGCGAGTAGACCTGCCACCCAAGCAGGCCTGTCAG +
Preference number: 3 (lower is better)
Translates to: TWTSVRKCPAWD*RVDLPPKQACQ
Trigger: CTGACAGGCCTGCTTGGGTGGCAGGTCTACTCGTCAGTCCCAGGCTGGGCATTTCCTGACAGAGGTCCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR GCA 72 bp AGCAACAGCAGCTGGGCAAGCCAGATAGGCCGCCCATaGTCTCAGCCTTTCTCCCTCCCCCGTCTCATTCCA +
Preference number: 3 (lower is better)
Translates to: SNSSWASQIGRP*SQPFSLPRLIP
Trigger: TGGAATGAGACGGGGGAGGGAGAAAGGCTGAGAGCATGGGCGGCCTATCTGGCTTGCCCAGCTGCTGTTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR GCA 72 bp GTGAGCACAGCAGGACACTTCCTGTGCCTTGCTGTCTaGCGGACCTGGACCTCTGTCAGGAAATGCCCAGCC +
Preference number: 3 (lower is better)
Translates to: VSTAGHFLCLAV*RTWTSVRKCPA
Trigger: GGCTGGGCATTTCCTGACAGAGGTCCAGGTCCGGCAGACAGCAAGGCACAGGAAGTGTCCTGCTGTGCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR CCA 72 bp GAAAGGACTGGTAGAAGAGCCAAGACACGGCTAGCGTaGCACCCCCTCCCCAGGACCACATTCTCCAGGGTG +
Preference number: 3 (lower is better)
Translates to: ERTGRRAKTRLA*HPLPRTTFSRV
Trigger: CACCCTGGAGAATGTGGTCCTGGGGAGGGGGTGCCACGCTAGCCGTGTCTTGGCTCTTCTACCAGTCCTTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR CCA 72 bp AGGGGCGACCGGTTGGCCAAAGCCTTGGTGTGCCCTTaGCACAATTCTGCCAAGACCCTTACCCTCTCCTCT +
Preference number: 3 (lower is better)
Translates to: RGDRLAKALVCP*HNSAKTLTLSS
Trigger: AGAGGAGAGGGTAAGGGTCTTGGCAGAATTGTGCCAAGGGCACACCAAGGCTTTGGCCAACCGGTCGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CAA 90 bp GTTTGGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGGTGGCGACGCTGCGGTaGTCCCGGGCACAGTGGGCC +
Preference number: 3 (lower is better)
Translates to: VWFEYRKWKRLWKSLCTRVATLR*SRAQWA
Trigger: GGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCAC...CCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR CAA 90 bp ACGGATGACCGGAACCTGCGTGTGAAGGCGCTCACAAGGAATGTTCCTGTACGGGCGGGGTCGGGGTCCTaGGTTACTGCTTTATTGCTG +
Preference number: 3 (lower is better)
Translates to: TDDRNLRVKALTRNVPVRAGSGS*VTALLL
Trigger: CAGCAATAAAGCAGTAACCAAGGACCCCGACCCCGC...CCGTACAGGAACATTCCTTGTGAGCGCCTTCACACGCAGGTTCCGGTCATCCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR TCA 72 bp TCTCCTTTAAGATTCTCTCCCCAGCTGGAAGGCCGATaGCTGGGTGGTCGGGAGGGAGACCCAGCTCTCCTT +
Preference number: 3 (lower is better)
Translates to: SPLRFSPQLEGR*LGGREGDPALL
Trigger: AAGGAGAGCTGGGTCTCCCTCCCGACCACCCAGTCATCGGCCTTCCAGCTGGGGAGAGAATCTTAAAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR GCA 72 bp ACCATCCACCCCAGACTTACCACACACCCTTCCTGCTaGTCCTCTTCCTGCCCTTATCAACCTGGGTCCCTC +
Preference number: 3 (lower is better)
Translates to: TIHPRLTTHPSC*SSSCPYQPGSL
Trigger: GAGGGACCCAGGTTGATAAGGGCAGGAAGAGGAGCAGCAGGAAGGGTGTGTGGTAAGTCTGGGGTGGATGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR GCA 72 bp CACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTaGCTGAGCCACCAATCCACCCAGACAATAAACCAT +
Preference number: 3 (lower is better)
Translates to: HQAPSVARKMPT*LSHQSTQTINH
Trigger: ATGGTTTATTGTCTGGGTGGATTGGTGGCTCAGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR GCA 72 bp GCAGTCAGTGAGCACAGCAGGACACTTCCTGTGCCTTaGTGTCTGCCGGACCTGGACCTCTGTCAGGAAATG +
Preference number: 3 (lower is better)
Translates to: AVSEHSRTLPVP*CLPDLDLCQEM
Trigger: CATTTCCTGACAGAGGTCCAGGTCCGGCAGACAGCAAGGCACAGGAAGTGTCCTGCTGTGCTCACTGACTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CAA 90 bp GGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGAAGGCCTGGGGTCTCCTTaGGTCAAAGCTGATATCAAA +
Preference number: 3 (lower is better)
Translates to: GRLFAFRLQNSPPLVTEEGLGSP*VKADIK
Trigger: TTTGATATCAGCTTTGACCAAAGGAGACCCCAGGCC...TTCCTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR GCA 72 bp GCCCTTATCAACCTGGGTCCCTCACACTTCGCCAGTTaGGTCCCCGTGGACAGTCATGAGTCTAGAGGAAAG +
Preference number: 3 (lower is better)
Translates to: ALINLGPSHFAS*VPVDSHESRGK
Trigger: CTTTCCTCTAGACTCATGACTGTCCACGGGGACGCAACTGGCGAAGTGTGAGGGACCCAGGTTGATAAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR CCA 72 bp TCAAGGGGCTGCTTCTATTCCCTCAGTTTAGGGTCCTaGGAGGCTGACGGGTTTGGGCAGCTTTTGGGAACT +
Preference number: 3 (lower is better)
Translates to: SRGCFYSLSLGS*EADGFGQLLGT
Trigger: AGTTCCCAAAAGCTGCCCAAACCCGTCAGCCTCCCAGGACCCTAAACTGAGGGAATAGAAGCAGCCCCTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR CCA 72 bp TGTTACTTAGCAGGGGCGACCGGTTGGCCAAAGCCTTaGTGTGCCCTTGGCACAATTCTGCCAAGACCCTTA +
Preference number: 3 (lower is better)
Translates to: CYLAGATGWPKP*CALGTILPRPL
Trigger: TAAGGGTCTTGGCAGAATTGTGCCAAGGGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGCTAAGTAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CAA 90 bp GGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGCCACCAATTGGTTACTGCTTTATaGCTGTTTGGTTCGAGTATA +
Preference number: 3 (lower is better)
Translates to: GHQAPSVARKMPTCLSHQLVTAL*LFGSSI
Trigger: TATACTCGAACCAAACAGCAATAAAGCAGTAACCAA...TTGGTGGCTCAGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CAA 90 bp GTTTGGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGCAGAACTCCCCGCCCTaGGTGACTGAGGAAGGAAGG +
Preference number: 3 (lower is better)
Translates to: VWFEYRKWKRLWKSLCTRQNSPP*VTEEGR
Trigger: CCTTCCTTCCTCAGTCACCAAGGGCGGGGAGTTCTG...CCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACCAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR CCA 72 bp TACATGGATTACTGTTACTTAGCAGGGGCGACCGGTTaGCCAAAGCCTTGGTGTGCCCTTGGCACAATTCTG +
Preference number: 3 (lower is better)
Translates to: YMDYCYLAGATG*PKPWCALGTIL
Trigger: CAGAATTGTGCCAAGGGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGCTAAGTAACAGTAATCCATGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CAA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGGGCCTGGGGTCTCCTTaGGTCAAAGCTGATATCAAA +
Preference number: 3 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQGLGSP*VKADIK
Trigger: TTTGATATCAGCTTTGACCAAAGGAGACCCCAGGCC...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR-3UTR CAA 90 bp GAGCGGTGTTGTGATCTGGGGGCCAGCCATGTGGTAAAAAGGAGTAGAGGTCAATGTGTTCAAGAGGCTTaGGTTAAGTCAGGAAGAAGT +
Preference number: 3 (lower is better)
Translates to: ERCCDLGASHVVKRSRGQCVQEA*VKSGRS
Trigger: ACTTCTTCCTGACTTAACCAAAGCCTCTTGAACACA...TTGACCTCTACTCCTTTTTACCACATGGCTGGCCCCCAGATCACAACACCGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR CCA 72 bp TTCAGAACCTCTGTCGTGAATGTGTTCAAGAGGCTTTaGTTAAGTCAGGAAGAAGTGCCCAGGGTGTGTGTC +
Preference number: 3 (lower is better)
Translates to: FRTSVVNVFKRL*LSQEEVPRVCV
Trigger: GACACACACCCTGGGCACTTCTTCCTGACTTAACCAAAGCCTCTTGAACACATTCACGACAGAGGTTCTGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR-3UTR CAA 90 bp TACTCTTCTGTCCTCTTAGAGACTTTCGCCTGTATACATGGATTACTGTTACTTCGGTTGGCCAAAGCCTaGGTGTGCCCTTGGCACAAT +
Preference number: 3 (lower is better)
Translates to: YSSVLLETFACIHGLLLLRLAKA*VCPWHN
Trigger: ATTGTGCCAAGGGCACACCAAGGCTTTGGCCAACCG...AAGTAACAGTAATCCATGTATACAGGCGAAAGTCTCTAAGAGGACAGAAGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCCGGCGCAGTGCGTGTTaGCCGCGGCCTCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: TVATLRLSRAQWALRAAPRRSAC*PRPLGP
Trigger: CGGGCCCAGAGGCCGCGGTCAACACGCACTGCGCCG...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
78% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
3UTR CAA 72 bp CCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTaGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: PRGGAATVATLR*SRAQWALRAAP
Trigger: GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCGTCCCGGGCTGCCGCTaGCGCCGCGAAATGGGTCGG +
Preference number: 4 (lower is better)
Translates to: TVATLRLSRAQWALRAAPVPGCR*RREMGR
Trigger: CCGACCCATTTCGCGGCGGCAGCGGCAGCCCGGGAC...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
77% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACGGTAGCAGGCCTGGATaGCCGGCGTGGCGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHGSRPG*PAWRPA
Trigger: TGCGGGCCGCCACGCCGGTCATCCAGGCCTGCTACC...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCGGCGGTACTGGCGCGTaGACCGCATGCCGCACGCGT +
Preference number: 4 (lower is better)
Translates to: TVATLRLSRAQWALRAAPGGTGA*TACRTR
Trigger: ACGCGTGCGGCATGCGGTTCACGCGCCAGTACCGCC...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCCGGGGAAGTCGAGCTTaGCCTTGCCGTCGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: TVATLRLSRAQWALRAAPRGSRA*PCRRGR
Trigger: CCGGCCCCGACGGCAAGGGCAAGCTCGACTTCCCCG...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
76% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACCCGCCGCCCCGCAGGTaGCAGTACTTGCCGTGGCGC +
Preference number: 4 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHPPPRR*QYLPWR
Trigger: GCGCCACGGCAAGTACTGCCACCTGCGGGGCGGCGG...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGCGGCCGCCTCGGCCCTaGCGTACAGCGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PGPQGREGRAPREWETWWRPPRP*RTALPP
Trigger: AGGAGGAAGCGCTGTACGGCAGGGCCGAGGCGGCCG...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACGCAGCAGCAGCTGCCTaGAGTGGCCGGGCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHAAAAA*SGRAPP
Trigger: TGGAGGCGCCCGGCCACTCCAGGCAGCTGCTGCTGC...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACGCTGCCGCCGCGAAATaGGTCGGAAGGCGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHAAAAK*VGRRCG
Trigger: GCCGCACCGCCTTCCGACCCATTTCGCGGCGGCAGC...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACGGCCAGGTGCGGGCATaGGTAGCCCTCGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHGQVRA*VALEVA
Trigger: GGCCACCTCGAGGGCTACCCATGCCCGCACCTGGCC...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCTTATCAGTCCCGGGGTaGGTGGGAGCGGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: TVATLRLSRAQWALRAAPLSVPG*VGAGVR
Trigger: CCGCACCCCCGCTCCCACCCACCCCGGGACTGATAA...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGGCACCACCAGGGACTTaGGGTAGGCGCTGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: PGPQGREGRAPREWETWWAPPGT*GRRCWP
Trigger: CGGCCAGCAGCGCCTACCTCAAGTCCCTGGTGGTGC...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGGGCTGGGGTCCTCGCTaGTACCGGTCTCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: PGPQGREGRAPREWETWWGWGPR*YRSPRC
Trigger: GCAGCGAGGAGACCGGTAGCAGCGAGGACCCCAGCC...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp AGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCGGCTGGGGTCCTCGCTaGTACCGGTCTCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: SRHCGDAAVVPGTVGPARGWGPR*YRSPRC
Trigger: GCAGCGAGGAGACCGGTAGCAGCGAGGACCCCAGCC...GCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GTGAGGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGCGGCCGCCTCGGCCCTaGCGTACAGCGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VRPPRGGAATVATLRLSRRPPRP*RTALPP
Trigger: AGGAGGAAGCGCTGTACGGCAGGGCCGAGGCGGCCG...CCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTCAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGAGGAAGTGCGTGGTCTaGGCCAGCAGCTCGGCCGCG +
Preference number: 4 (lower is better)
Translates to: PGPQGREGRAPREWETWWRKCVV*ASSSAA
Trigger: CGCGGCCGAGCTGCTGGCGCAGACCACGCACTTCCT...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGGAAGTGCGTGGTCTaGGCCAGCAGCTCGGCCGCG +
Preference number: 4 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHRKCVV*ASSSAA
Trigger: CGCGGCCGAGCTGCTGGCGCAGACCACGCACTTCCT...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp AGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCTGGTCTCAGGCCCGTaGTCTCGGGTGGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: SRHCGDAAVVPGTVGPARLVSGP*SRVAST
Trigger: GGTGGAGGCCACCCGAGAGCACGGGCCTGAGACCAG...GCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGCAGCTGCCTGGAGTaGCCGGGCGCCTCCATCGTG +
Preference number: 4 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHSSCLE*PGASIV
Trigger: CACGATGGAGGCGCCCGGCCACTCCAGGCAGCTGCT...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGGCCTCCTCCAGCTTCTaGAAGGGCAGCGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: PGPQGREGRAPREWETWWASSSF*KGSGGS
Trigger: GCTGCCGCCGCTGCCCTTCCAGAAGCTGGAGGAGGC...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGGAGAGAAACGGTCGATaGTCCGGCCGTCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: PGPQGREGRAPREWETWWERNGR*SGRRAR
Trigger: CCGGGCCCGACGGCCGGACCATCGACCGTTTCTCTC...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACGAGAGAAACGGTCGATaGTCCGGCCGTCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHERNGR*SGRRAR
Trigger: CCGGGCCCGACGGCCGGACCATCGACCGTTTCTCTC...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp AGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCGTGGAGCCGCCACTGTaGCGACGCTGCGGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: SRHCGDAAVVPGTVGPARVEPPL*RRCGCP
Trigger: GGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCAC...GCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCT
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGGTGGAGCCGCCACTGTaGCGACGCTGCGGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: PGPQGREGRAPREWETWWVEPPL*RRCGCP
Trigger: GGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCAC...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GTGAGGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGAGGCCGCCGAGAGGTaGAGCCGCCACTGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: VRPPRGGAATVATLRLSREAAER*SRHCGD
Trigger: GTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTC...CCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTCAC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp AGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCGGCGGCCGGTGTAGATaGAGTCCAGCACCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: SRHCGDAAVVPGTVGPARGGRCR*SPAPGG
Trigger: TCCGCCTGGTGCTGGACTTCATCTACACCGGCCGCC...GCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp CCACCCAGCGGGCGCAGCCCATCCAGGTCCTTGTGCAGGGGCAGAAGAGAGCAGCGGCGCAGTGCGTGTTaGCCGCGGCCTCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: PPSGRSPSRSLCRGRREQRRSAC*PRPLGP
Trigger: CGGGCCCAGAGGCCGCGGTCAACACGCACTGCGCCG...CTGCTCTCTTCTGCCCCTGCACAAGGACCTGGATGGGCTGCGCCCGCTGGGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTCCTCCTCCTCCACGTaGGCCTCCACGTGCGCGTTC +
Preference number: 4 (lower is better)
Translates to: PGPQGREGRAPREWETWWSSSST*ASTCAF
Trigger: GAACGCGCACGTGGAGGCTCACGTGGAGGAGGAGGA...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCGCCGCCTTGTCCTGCTaGTTCAGGCTCAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: TVATLRLSRAQWALRAAPAALSC*FRLSCS
Trigger: CGAGCAGCTGAGCCTGAAGCAGCAGGACAAGGCGGC...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGGCGGCCGCCTTGTCCTaGTGCTTCAGGCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PGPQGREGRAPREWETWWAAALS*CFRLSC
Trigger: GCAGCTGAGCCTGAAGCAGCAGGACAAGGCGGCCGC...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp AGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCCACTGTGGCGACGCTaGGGTTGTCCCGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: SRHCGDAAVVPGTVGPARPLWRR*GCPGHS
Trigger: ACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGG...GCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCT
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCGGTCGGTCTGTCCTaGTGGTCCGTCCTCCCCGCG +
Preference number: 4 (lower is better)
Translates to: ERWSRHCGDAAVVPGTVGPVGLS*WSVLPA
Trigger: CGCGGGGAGGACGGACCAGCAGGACAGACCGACCGG...GCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCGGCCAGGTGCGGGCATaGGTAGCCCTCGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: ERWSRHCGDAAVVPGTVGGQVRA*VALEVA
Trigger: GGCCACCTCGAGGGCTACCCATGCCCGCACCTGGCC...GCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp AGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCCCGCAGATGGTGCATaGGTAGGGCCGGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: SRHCGDAAVVPGTVGPARPADGA*VGPGQP
Trigger: TGGCTGACCCGGCCCTACCCATGCACCATCTGCGGG...GCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGCCCGCAGATGGTGCATaGGTAGGGCCGGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PGPQGREGRAPREWETWWPADGA*VGPGQP
Trigger: TGGCTGACCCGGCCCTACCCATGCACCATCTGCGGG...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACCGTGCAGGAAGTGCGTaGTCTGCGCCAGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHRAGSA*SAPAAR
Trigger: CCGAGCTGCTGGCGCAGACCACGCACTTCCTGCACG...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACTGGTGCGCTGGTTGTTaGGCTGCAGCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHWCAGC*AAAAAA
Trigger: GGCAGCTGCTGCTGCAGCTCAACAACCAGCGCACCA...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp AGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGCGGCGCAGTGCGTGTTaGCCGCGGCCTCTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: RRELKRPRSSPAQPGLGMRRSAC*PRPLGP
Trigger: CGGGCCCAGAGGCCGCGGTCAACACGCACTGCGCCG...CATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCACTCCCCGCCCTTGGTaGCTGAGGAAGGAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: TVATLRLSRAQWALRAAPTPRPW*LRKEGL
Trigger: CAACCCTTCCTTCCTCAGTCACCAAGGGCGGGGAGT...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACGGGAGGTGGTGCTGTTaGCGGATGACCGGAACCTGC +
Preference number: 4 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHGRWCC*RMTGTC
Trigger: GCAGGTTCCGGTCATCCGTCAACAGCACCACCTCCC...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp AGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCGCCAGCACGTTCTTGTaGGCGCGGAAGAGGGCGTTC +
Preference number: 4 (lower is better)
Translates to: SRHCGDAAVVPGTVGPARASTFL*ARKRAF
Trigger: GAACGCCCTCTTCCGCGCGCACAAGAACGTGCTGGC...GCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCGAGGTTGCGTTGCTGTaGGAACTTGCCGCCGCACAC +
Preference number: 4 (lower is better)
Translates to: TVATLRLSRAQWALRAAPEVALL*ELAAAH
Trigger: GTGTGCGGCGGCAAGTTCGCACAGCAACGCAACCTC...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CAGAGCCCCTCCCAAGGATCGGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCACGGGGAAGTCGAGCTTaGCCTTGCCGTCGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: QSPSQGSGGSCWDPPGLPRGSRA*PCRRGR
Trigger: CCGGCCCCGACGGCAAGGGCAAGCTCGACTTCCCCG...TGGCAGCCCAGGAGGGTCCCAGCAGCTTCCGCCCGATCCTTGGGAGGGGCTCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GTGAGGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGTGCTTCAGGCTCAGCTaGTCGGCCGTGAGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: VRPPRGGAATVATLRLSRCFRLS*SAVRRA
Trigger: GGCTCGCCTCACGGCCGAGCAGCTGAGCCTGAAGCA...CCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCCACTCCCCAACTCTaGCCGACGCTCCGACCCCAG +
Preference number: 4 (lower is better)
Translates to: ERWSRHCGDAAVVPGTVGPTPQL*PTLRPQ
Trigger: CTGGGGTCGGAGCGTCGGGCAGAGTTGGGGAGTGGG...GCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGCCCCACACAGCCCTaGATACCACCACCCCAGCCA +
Preference number: 4 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHSPTQP*IPPPQP
Trigger: TGGCTGGGGTGGTGGTATGCAGGGCTGTGTGGGGCT...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGCGGCGGAGGCCCGACTaGGGACGGGTAGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: EGAKETAFQPSPAWARDGRRRPD*GRVAGL
Trigger: CAGGCCTGCTACCCGTCCCCAGTCGGGCCTCCGCCG...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCGCCTCCTCCAGCTTCTaGAAGGGCAGCGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: ERWSRHCGDAAVVPGTVGASSSF*KGSGGS
Trigger: GCTGCCGCCGCTGCCCTTCCAGAAGCTGGAGGAGGC...GCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACGAGGCGGGAGGGGCCTaGGGTCTCCTTTGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHEAGGA*GLLWSK
Trigger: CTTTGACCAAAGGAGACCCCAGGCCCCTCCCGCCTC...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp AGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCTGGTCCCACGCTGCGTaGACTTCTTCCCGCAGATGG +
Preference number: 4 (lower is better)
Translates to: SRHCGDAAVVPGTVGPARWSHAA*TSSRRW
Trigger: CCATCTGCGGGAAGAAGTTCACGCAGCGTGGGACCA...GCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp CCCAGCGGGCGCAGCCCATCCAGGTCCTTGTGCAGGGGCAGAAGAGAGCAGCGGAGCAGTGAGGCCAGGTaGGGCCGCCGAGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: PSGRSPSRSLCRGRREQRSSEAR*GRREVE
Trigger: CTCCACCTCTCGGCGGCCTCACCTGGCCTCACTGCT...CCGCTGCTCTCTTCTGCCCCTGCACAAGGACCTGGATGGGCTGCGCCCGCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGCCACCAATGGGCCCAGGTGGGCTaGGGGAGCCACACTGGGGCC +
Preference number: 4 (lower is better)
Translates to: GHQAPSVARKMPTCLSHQWAQVG*GSHTGA
Trigger: GGCCCCAGTGTGGCTCCCTCAGCCCACCTGGGCCCA...TTGGTGGCTCAGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GTGAGGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGTACAGCTCGGCGCAGTaGGTGTTGACCGCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: VRPPRGGAATVATLRLSRYSSAQ*VLTAAS
Trigger: AGAGGCCGCGGTCAACACGCACTGCGCCGAGCTGTA...CCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTCAC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp AAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTAGGCTCTTCGCCTGCTCGGGTCCCGGGCTaGCGCTGCCGCCGCGAAATG +
Preference number: 4 (lower is better)
Translates to: KGREGTAGVGDLVVGSSPARVPG*RCRREM
Trigger: CATTTCGCGGCGGCAGCGGCAGCCCGGGACCCGAGC...AGGCGAAGAGCCTACCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGCTCGGGTCCCGGGCTaGCGCTGCCGCCGCGAAATG +
Preference number: 4 (lower is better)
Translates to: EEGAKETAFQPSPAWARDARVPG*RCRREM
Trigger: CATTTCGCGGCGGCAGCGGCAGCCCGGGACCCGAGC...ATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCTACCGGTCTCCTCGCTaGTGCTCTTGTAGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: TVATLRLSRAQWALRAAPYRSPR*CSCSRR
Trigger: GCGACGACTACAAGAGCAGCAGCGAGGAGACCGGTA...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTCTTCCCGCAGATGGTaGATGGGTAGGGCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: PGPQGREGRAPREWETWWSSRRW*MGRAGS
Trigger: TGACCCGGCCCTACCCATGCACCATCTGCGGGAAGA...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CCACCCAGCGGGCGCAGCCCATCCAGGTCCTTGTGCAGGGGCAGAAGAGAGCAGAGTCGAGCTTGCCCTTaGCGTCGGGGCCGGGGACGC +
Preference number: 4 (lower is better)
Translates to: PPSGRSPSRSLCRGRREQSRACP*RRGRGR
Trigger: GCGTCCCCGGCCCCGACGGCAAGGGCAAGCTCGACT...CTGCTCTCTTCTGCCCCTGCACAAGGACCTGGATGGGCTGCGCCCGCTGGGTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCACTGTGGCGACGCTaGGGTTGTCCCGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: ERWSRHCGDAAVVPGTVGPLWRR*GCPGHS
Trigger: ACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGG...GCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCCAGGGGCCCTTTCCTTaGCCCTTTAGCTGGTACCTC +
Preference number: 4 (lower is better)
Translates to: TVATLRLSRAQWALRAAPQGPFP*PFSWYL
Trigger: GAGGTACCAGCTAAAGGGGCAAGGAAAGGGCCCCTG...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
70% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCACACTTCCTGTGCCTTaGTGTCTGCCGGACCTGGAC +
Preference number: 4 (lower is better)
Translates to: TVATLRLSRAQWALRAAPTLPVP*CLPDLD
Trigger: GTCCAGGTCCGGCAGACAGCAAGGCACAGGAAGTGT...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp AGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGCGGCGGAGGCCCGACTaGGGACGGGTAGCAGGCCTG +
Preference number: 4 (lower is better)
Translates to: RRELKRPRSSPAQPGLGMRRRPD*GRVAGL
Trigger: CAGGCCTGCTACCCGTCCCCAGTCGGGCCTCCGCCG...CATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACCCGGCGGGCTCTTCTTaGACAGGTCCAGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHPAGSS*TGPGHK
Trigger: TTTGTGGCCTGGACCTGTCCAAGAAGAGCCCGCCGG...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGGCTGCCGCCGCGAAATaGGTCGGAAGGCGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: EGAKETAFQPSPAWARDGAAAAK*VGRRCG
Trigger: GCCGCACCGCCTTCCGACCCATTTCGCGGCGGCAGC...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp CAGAGCCCCTCCCAAGGATCGGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGAGAGAAACGGTCGATaGTCCGGCCGTCGGGCCCGG +
Preference number: 4 (lower is better)
Translates to: QSPSQGSGGSCWDPPGLPERNGR*SGRRAR
Trigger: CCGGGCCCGACGGCCGGACCATCGACCGTTTCTCTC...TGGCAGCCCAGGAGGGTCCCAGCAGCTTCCGCCCGATCCTTGGGAGGGGCTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGGAGGGGCGCTCTAGGTaGGAGAGAAACGGTCGATGG +
Preference number: 4 (lower is better)
Translates to: PGPQGREGRAPREWETWWEGRSR*ERNGRW
Trigger: CCATCGACCGTTTCTCTCCCACCTAGAGCGCCCCTC...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGCCCCTCCCAAGGATCGGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGGGCAGGGGCGACCGGTTaGCCAAAGCCTTGGTGTGCC +
Preference number: 4 (lower is better)
Translates to: EPLPRIGRKLLGPSWAARAGATG*PKPWCA
Trigger: GGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGC...CCTGGCAGCCCAGGAGGGTCCCAGCAGCTTCCGCCCGATCCTTGGGAGGGGCTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGCGGTACTGGCGCGTaGACCGCATGCCGCACGCGT +
Preference number: 4 (lower is better)
Translates to: EEGAKETAFQPSPAWARDGGTGA*TACRTR
Trigger: ACGCGTGCGGCATGCGGTTCACGCGCCAGTACCGCC...ATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp AAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTAGGCTCTTCGCCTGGCGGTACTGGCGCGTaGACCGCATGCCGCACGCGT +
Preference number: 4 (lower is better)
Translates to: KGREGTAGVGDLVVGSSPGGTGA*TACRTR
Trigger: ACGCGTGCGGCATGCGGTTCACGCGCCAGTACCGCC...AGGCGAAGAGCCTACCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGGGCCCAGCTCGGCCGTaGACTTGGCCAGCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: EGAKETAFQPSPAWARDGGPARP*TWPAGR
Trigger: TCTACCCGCTGGCCAAGTTCACGGCCGAGCTGGGCC...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCCCTTGCCGCACGGAATaGACACGTACAGGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: TVATLRLSRAQWALRAAPPCRTE*TRTGCH
Trigger: GTGACAACCTGTACGTGTGCATTCCGTGCGGCAAGG...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
69% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATAGTCGAGCTTGCCCTTaGCGTCGGGGCCGGGGACGC +
Preference number: 4 (lower is better)
Translates to: EEGAKETAFQPSPAWARDSRACP*RRGRGR
Trigger: GCGTCCCCGGCCCCGACGGCAAGGGCAAGCTCGACT...ATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp AGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGCGGGGAAGTCGAGCTTaGCCTTGCCGTCGGGGCCGG +
Preference number: 4 (lower is better)
Translates to: RRELKRPRSSPAQPGLGMRGSRA*PCRRGR
Trigger: CCGGCCCCGACGGCAAGGGCAAGCTCGACTTCCCCG...CATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CCCAGCGGGCGCAGCCCATCCAGGTCCTTGTGCAGGGGCAGAAGAGAGCAGCGGTGCTTCAGGCTCAGCTaGTCGGCCGTGAGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: PSGRSPSRSLCRGRREQRCFRLS*SAVRRA
Trigger: GGCTCGCCTCACGGCCGAGCAGCTGAGCCTGAAGCA...CCGCTGCTCTCTTCTGCCCCTGCACAAGGACCTGGATGGGCTGCGCCCGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCGGCCGCCGGGGCGCATaGAATAAATATGGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: ERWSRHCGDAAVVPGTVGGRRGA*NKYGPG
Trigger: CCCCGGACCATATTTATTGCATGCGCCCCGGCGGCC...GCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp AGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGCAGCAGCAGCTGCCTaGAGTGGCCGGGCGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RRELKRPRSSPAQPGLGMAAAAA*SGRAPP
Trigger: TGGAGGCGCCCGGCCACTCCAGGCAGCTGCTGCTGC...CATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCTGGCAGTACTTGCCGTaGCGCTTGAGGCGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: TVATLRLSRAQWALRAAPWQYLP*RLRRFL
Trigger: CAAGAAACGCCTCAAGCGCCACGGCAAGTACTGCCA...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGGCCTCCTCCAGCTTCTaGAAGGGCAGCGGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: EGAKETAFQPSPAWARDGASSSF*KGSGGS
Trigger: GCTGCCGCCGCTGCCCTTCCAGAAGCTGGAGGAGGC...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GTGAGGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGAGGGGCGCTCTAGGTaGGAGAGAAACGGTCGATGG +
Preference number: 4 (lower is better)
Translates to: VRPPRGGAATVATLRLSREGRSR*ERNGRW
Trigger: CCATCGACCGTTTCTCTCCCACCTAGAGCGCCCCTC...CCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGGTCGGTCTGTCCTGCTaGTCCGTCCTCCCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: EGAKETAFQPSPAWARDGVGLSC*SVLPAS
Trigger: GGACGCGGGGAGGACGGACCAGCAGGACAGACCGAC...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTACAGCAACAGCAGCTaGGCAAGCCAGATAGGCCGC +
Preference number: 4 (lower is better)
Translates to: PGPQGREGRAPREWETWWYSNSS*ASQIGR
Trigger: GCGGCCTATCTGGCTTGCCCAGCTGCTGTTGCTGTA...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp CCCAGCGGGCGCAGCCCATCCAGGTCCTTGTGCAGGGGCAGAAGAGAGCAGCGGTCACGTGGGCCCAGGTaGGCTGAGGGAGCCACACTG +
Preference number: 4 (lower is better)
Translates to: PSGRSPSRSLCRGRREQRSRGPR*AEGATL
Trigger: CAGTGTGGCTCCCTCAGCCCACCTGGGCCCACGTGA...CCGCTGCTCTCTTCTGCCCCTGCACAAGGACCTGGATGGGCTGCGCCCGCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp CCCTGGGCCCCCACCTCTTCTACCATCCACCCCAGACTTACCACACACCCTTCCGGTAGCAGGCCTGGATaGCCGGCGTGGCGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: PWAPTSSTIHPRLTTHPSGSRPG*PAWRPA
Trigger: TGCGGGCCGCCACGCCGGTCATCCAGGCCTGCTACC...GGAAGGGTGTGTGGTAAGTCTGGGGTGGATGGTAGAAGAGGTGGGGGCCCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCACTCCCCGCCCTTGGTaGCTGAGGAAGGAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: ERWSRHCGDAAVVPGTVGTPRPW*LRKEGL
Trigger: CAACCCTTCCTTCCTCAGTCACCAAGGGCGGGGAGT...GCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GTGAGGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGTGTCCAGCATCGTCTaGCCAGCACACTCTCCCGAT +
Preference number: 4 (lower is better)
Translates to: VRPPRGGAATVATLRLSRVSSIV*PAHSPD
Trigger: ATCGGGAGAGTGTGCTGGGCAGACGATGCTGGACAC...CCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000322941.3
CDS-3UTR GCA 90 bp CCCTGGGCCCCCACCTCTTCTACCATCCACCCCAGACTTACCACACACCCTTCCGTCCCGGGCTGCCGCTaGCGCCGCGAAATGGGTCGG +
Preference number: 4 (lower is better)
Translates to: PWAPTSSTIHPRLTTHPSVPGCR*RREMGR
Trigger: CCGACCCATTTCGCGGCGGCAGCGGCAGCCCGGGAC...GGAAGGGTGTGTGGTAAGTCTGGGGTGGATGGTAGAAGAGGTGGGGGCCCAGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GTGAGGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGTCATGGTCCCACGCTaGGTGAACTTCTTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: VRPPRGGAATVATLRLSRVMVPR*VNFFPQ
Trigger: CTGCGGGAAGAAGTTCACGCAGCGTGGGACCATGAC...CCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGCCCTTCACCCCTCCTTaGCCGCCTACCCTCCCTCCA +
Preference number: 4 (lower is better)
Translates to: EGAKETAFQPSPAWARDGPFTPP*PPTLPP
Trigger: TGGAGGGAGGGTAGGCGGGCAAGGAGGGGTGAAGGG...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATAGCAGCTGCCTGGAGTaGCCGGGCGCCTCCATCGTG +
Preference number: 4 (lower is better)
Translates to: EEGAKETAFQPSPAWARDSSCLE*PGASIV
Trigger: CACGATGGAGGCGCCCGGCCACTCCAGGCAGCTGCT...ATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGCCCCTCCCAAGGATCGGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGGCCGGCGGGCTCTTCTTaGACAGGTCCAGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: EPLPRIGRKLLGPSWAARPAGSS*TGPGHK
Trigger: TTTGTGGCCTGGACCTGTCCAAGAAGAGCCCGCCGG...CCTGGCAGCCCAGGAGGGTCCCAGCAGCTTCCGCCCGATCCTTGGGAGGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp AAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTAGGCTCTTCGCCTTCGGGCGGAAGCTGCTaGGACCCTCCTGGGCTGCCA +
Preference number: 4 (lower is better)
Translates to: KGREGTAGVGDLVVGSSPSGGSC*DPPGLP
Trigger: TGGCAGCCCAGGAGGGTCCCAGCAGCTTCCGCCCGA...AGGCGAAGAGCCTACCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGGCCTTGGTGTGCCCTTaGCACAATTCTGCCAAGACC +
Preference number: 4 (lower is better)
Translates to: PGPQGREGRAPREWETWWALVCP*HNSAKT
Trigger: GGTCTTGGCAGAATTGTGCCAAGGGCACACCAAGGC...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACTGTCATGGTCCAGGTTaGGCAGGTTGTCATGCACCA +
Preference number: 4 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHCHGPG*AGCHAP
Trigger: TGGTGCATGACAACCTGCTCAACCTGGACCATGACA...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp AAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTAGGCTCTTCGCCTTCCTCCTCCTCCACGTaGGCCTCCACGTGCGCGTTC +
Preference number: 4 (lower is better)
Translates to: KGREGTAGVGDLVVGSSPSSSST*ASTCAF
Trigger: GAACGCGCACGTGGAGGCTCACGTGGAGGAGGAGGA...AGGCGAAGAGCCTACCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp CCCAGCGGGCGCAGCCCATCCAGGTCCTTGTGCAGGGGCAGAAGAGAGCAGCGGTGGTCCCACGCTGCGTaGACTTCTTCCCGCAGATGG +
Preference number: 4 (lower is better)
Translates to: PSGRSPSRSLCRGRREQRWSHAA*TSSRRW
Trigger: CCATCTGCGGGAAGAAGTTCACGCAGCGTGGGACCA...CCGCTGCTCTCTTCTGCCCCTGCACAAGGACCTGGATGGGCTGCGCCCGCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGTCAGCTGCTCGGCCGTaGGGCGAGCCACAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: EGAKETAFQPSPAWARDGSAARP*GEPQQR
Trigger: TCTTTGCTGTGGCTCGCCTCACGGCCGAGCAGCTGA...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp AAGATTCTCTCCCCAGCTGGAAGGCCGATGACTGGGTGGTCGGGAGGGAGACCCGAGGGTCCCCGGGGCTaGGAGCCCGGACGGAGGAAA +
Preference number: 4 (lower is better)
Translates to: KILSPAGRPMTGWSGGRPEGPRG*EPGRRK
Trigger: TTTCCTCCGTCCGGGCTCTCAGCCCCGGGGACCCTC...GGGTCTCCCTCCCGACCACCCAGTCATCGGCCTTCCAGCTGGGGAGAGAATCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp AGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGTGCCCAGCCTGGGACTaGCGAGTAGACCTGCCACCC +
Preference number: 4 (lower is better)
Translates to: RRELKRPRSSPAQPGLGMCPAWD*RVDLPP
Trigger: GGGTGGCAGGTCTACTCGTCAGTCCCAGGCTGGGCA...CATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGGCCAGCACGTTCTTGTaGGCGCGGAAGAGGGCGTTC +
Preference number: 4 (lower is better)
Translates to: EGAKETAFQPSPAWARDGASTFL*ARKRAF
Trigger: GAACGCCCTCTTCCGCGCGCACAAGAACGTGCTGGC...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGTACAGCTCGGCGCAGTaGGTGTTGACCGCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: EGAKETAFQPSPAWARDGYSSAQ*VLTAAS
Trigger: AGAGGCCGCGGTCAACACGCACTGCGCCGAGCTGTA...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATTGGGTCGGAAGGCGGTaGGGCCTCCTCCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: EEGAKETAFQPSPAWARDWVGRR*GLLQLL
Trigger: CAGAAGCTGGAGGAGGCCGCACCGCCTTCCGACCCA...ATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp AGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGTGGGTCGGAAGGCGGTaGGGCCTCCTCCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: RRELKRPRSSPAQPGLGMWVGRR*GLLQLL
Trigger: CAGAAGCTGGAGGAGGCCGCACCGCCTTCCGACCCA...CATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCTACCGGTCTCCTCGCTaGTGCTCTTGTAGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: ERWSRHCGDAAVVPGTVGYRSPR*CSCSRR
Trigger: GCGACGACTACAAGAGCAGCAGCGAGGAGACCGGTA...GCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CAGACCCCTGCCAGCAATGTCGGGCCTTGGTTAGCTGACCTAAGGCCTGGGACGCGGCCGCCTCGGCCCTaGCGTACAGCGCTTCCTCCT +
Preference number: 4 (lower is better)
Translates to: QTPASNVGPWLADLRPGTRPPRP*RTALPP
Trigger: AGGAGGAAGCGCTGTACGGCAGGGCCGAGGCGGCCG...CGTCCCAGGCCTTAGGTCAGCTAACCAAGGCCCGACATTGCTGGCAGGGGTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp AAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTAGGCTCTTCGCCTGCGGCCGCCTTGTCCTaGTGCTTCAGGCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: KGREGTAGVGDLVVGSSPAAALS*CFRLSC
Trigger: GCAGCTGAGCCTGAAGCAGCAGGACAAGGCGGCCGC...AGGCGAAGAGCCTACCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGGCCACCTTGGGGTCGTaGAGGAAGTGCGTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: EGAKETAFQPSPAWARDGATLGS*RKCVVC
Trigger: GCAGACCACGCACTTCCTGCACGACCCCAAGGTGGC...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp AAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTAGGCTCTTCGCCTCCACTGTGGCGACGCTaGGGTTGTCCCGGGCACAGT +
Preference number: 4 (lower is better)
Translates to: KGREGTAGVGDLVVGSSPPLWRR*GCPGHS
Trigger: ACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGG...AGGCGAAGAGCCTACCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CCACCCAGCGGGCGCAGCCCATCCAGGTCCTTGTGCAGGGGCAGAAGAGAGCAGGGGACCCTCCTGGGCTaGCAGGATTTAGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PPSGRSPSRSLCRGRREQGTLLG*QDLAGR
Trigger: CCTCCCTGCTAAATCCTGGCAGCCCAGGAGGGTCCC...CTGCTCTCTTCTGCCCCTGCACAAGGACCTGGATGGGCTGCGCCCGCTGGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GTGAGGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGCCTTCTGCTCTCTCATaGCCACAGAGGAGCCAATCC +
Preference number: 4 (lower is better)
Translates to: VRPPRGGAATVATLRLSRPSALS*PQRSQS
Trigger: GGATTGGCTCCTCTGTGGGCATGAGAGAGCAGAAGG...CCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGCCAGCCACACTTATCTaGAGAGGGGCCTGGCCCAGG +
Preference number: 4 (lower is better)
Translates to: EGAKETAFQPSPAWARDGPATLI*RGAWPR
Trigger: CCTGGGCCAGGCCCCTCTGCAGATAAGTGTGGCTGG...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GGTGGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGCTGCCGCCGCGAAATaGGTCGGAAGGCGGTGCGGC +
Preference number: 4 (lower is better)
Translates to: GGRLFAFRLQNSPPLVTEAAAAK*VGRRCG
Trigger: GCCGCACCGCCTTCCGACCCATTTCGCGGCGGCAGC...CTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACCACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GCTGGCTACAGCAACAGCAGCTGGGCAAGCCAGATAGGCCGCCCATGCTCTCAGGAGGCCGCCGAGAGGTaGAGCCGCCACTGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: AGYSNSSWASQIGRPCSQEAAER*SRHCGD
Trigger: GTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTC...CTGAGAGCATGGGCGGCCTATCTGGCTTGCCCAGCTGCTGTTGCTGTAGCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GGTGGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGCACCACCAGGGACTTaGGGTAGGCGCTGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: GGRLFAFRLQNSPPLVTEAPPGT*GRRCWP
Trigger: CGGCCAGCAGCGCCTACCTCAAGTCCCTGGTGGTGC...CTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp CAGACCCCTGCCAGCAATGTCGGGCCTTGGTTAGCTGACCTAAGGCCTGGGACGGCACCACCAGGGACTTaGGGTAGGCGCTGCTGGCCG +
Preference number: 4 (lower is better)
Translates to: QTPASNVGPWLADLRPGTAPPGT*GRRCWP
Trigger: CGGCCAGCAGCGCCTACCTCAAGTCCCTGGTGGTGC...CGTCCCAGGCCTTAGGTCAGCTAACCAAGGCCCGACATTGCTGGCAGGGGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGCGGTCTCCTCGCTGCTaGTCTTGTAGTCGTCGCCGT +
Preference number: 4 (lower is better)
Translates to: EGAKETAFQPSPAWARDGRSPRC*SCSRRR
Trigger: ACGGCGACGACTACAAGAGCAGCAGCGAGGAGACCG...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGCCGCCTTGTCCTGCTaGTTCAGGCTCAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: EEGAKETAFQPSPAWARDAALSC*FRLSCS
Trigger: CGAGCAGCTGAGCCTGAAGCAGCAGGACAAGGCGGC...ATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGCCACCAATCGGGTCGTGCAGGAAGTaGGTGGTCTGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: PPGAQCSTEDAHVPEPPIGSCRK*VVCASS
Trigger: GCTGCTGGCGCAGACCACGCACTTCCTGCACGACCC...GATTGGTGGCTCAGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp CAGACCCCTGCCAGCAATGTCGGGCCTTGGTTAGCTGACCTAAGGCCTGGGACGCCCACTCCCCAACTCTaGCCGACGCTCCGACCCCAG +
Preference number: 4 (lower is better)
Translates to: QTPASNVGPWLADLRPGTPTPQL*PTLRPQ
Trigger: CTGGGGTCGGAGCGTCGGGCAGAGTTGGGGAGTGGG...CGTCCCAGGCCTTAGGTCAGCTAACCAAGGCCCGACATTGCTGGCAGGGGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp AGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGCCGCCGGGGCGCATaGAATAAATATGGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: RRELKRPRSSPAQPGLGMGRRGA*NKYGPG
Trigger: CCCCGGACCATATTTATTGCATGCGCCCCGGCGGCC...CATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp AGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGACCCCTGCAGACCCCTaGCAGCAATGTCGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RRELKRPRSSPAQPGLGMTPADP*QQCRAL
Trigger: CAAGGCCCGACATTGCTGGCAGGGGTCTGCAGGGGT...CATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGCCCCTCCCAAGGATCGGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGGTGGCAGTACTTGCCGTaGCGCTTGAGGCGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: EPLPRIGRKLLGPSWAARWQYLP*RLRRFL
Trigger: CAAGAAACGCCTCAAGCGCCACGGCAAGTACTGCCA...CCTGGCAGCCCAGGAGGGTCCCAGCAGCTTCCGCCCGATCCTTGGGAGGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GGTGGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGGCTTGAGGCCCAGGTaGCTGCGCATGTGGCGCGTC +
Preference number: 4 (lower is better)
Translates to: GGRLFAFRLQNSPPLVTEGLRPR*LRMWRV
Trigger: GACGCGCCACATGCGCAGCCACCTGGGCCTCAAGCC...CTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACCACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp AGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGCCCAGCACACTCTCCTaGGGGGCATGTCGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: RRELKRPRSSPAQPGLGMPSTLS*GACRKP
Trigger: GGGCTTTCGACATGCCCCCCAGGAGAGTGTGCTGGG...CATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp CCACCCAGCGGGCGCAGCCCATCCAGGTCCTTGTGCAGGGGCAGAAGAGAGCAGCCTCGGCTCCTGTGCTaGGAGAAACTTCCAGGCGTG +
Preference number: 4 (lower is better)
Translates to: PPSGRSPSRSLCRGRREQPRLLC*EKLPGV
Trigger: CACGCCTGGAAGTTTCTCCCAGCACAGGAGCCGAGG...CTGCTCTCTTCTGCCCCTGCACAAGGACCTGGATGGGCTGCGCCCGCTGGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGCCCCTCCCAAGGATCGGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGGCTGCCCTTATCAACCTaGGTCCCTCACACTTCGCCA +
Preference number: 4 (lower is better)
Translates to: EPLPRIGRKLLGPSWAARLPLST*VPHTSP
Trigger: TGGCGAAGTGTGAGGGACCCAGGTTGATAAGGGCAG...CCTGGCAGCCCAGGAGGGTCCCAGCAGCTTCCGCCCGATCCTTGGGAGGGGCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp AGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGAGGGCCTTCTCGCCTaGGGACGCAGCCACTTTCTC +
Preference number: 4 (lower is better)
Translates to: RRELKRPRSSPAQPGLGMEGLLA*GRSHFL
Trigger: GAGAAAGTGGCTGCGTCCCCAGGCGAGAAGGCCCTC...CATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp AAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTAGGCTCTTCGCCTACTTGCCGTGGCGCTTaGGGCGTTTCTTGCACAGCG +
Preference number: 4 (lower is better)
Translates to: KGREGTAGVGDLVVGSSPTCRGA*GVSCTA
Trigger: CGCTGTGCAAGAAACGCCTCAAGCGCCACGGCAAGT...AGGCGAAGAGCCTACCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp GGTGGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGTCCTCCTCCTCCACGTaGGCCTCCACGTGCGCGTTC +
Preference number: 4 (lower is better)
Translates to: GGRLFAFRLQNSPPLVTESSSST*ASTCAF
Trigger: GAACGCGCACGTGGAGGCTCACGTGGAGGAGGAGGA...CTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp TCTCATGCCCACAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTTGACGGCCCAGCTCGGCCGTaGACTTGGCCAGCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: SHAHRGANPATAGGGAVDGPARP*TWPAGR
Trigger: TCTACCCGCTGGCCAAGTTCACGGCCGAGCTGGGCC...GTCAACAGCACCACCTCCCGCAGTAGCCGGATTGGCTCCTCTGTGGGCATGAGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GGTGGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGCAGCTGGAAGGCCGATaGCTGGGTGGTCGGGAGGGA +
Preference number: 4 (lower is better)
Translates to: GGRLFAFRLQNSPPLVTEQLEGR*LGGREG
Trigger: TCCCTCCCGACCACCCAGTCATCGGCCTTCCAGCTG...CTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp AAGATTCTCTCCCCAGCTGGAAGGCCGATGACTGGGTGGTCGGGAGGGAGACCCGTGGACAGCCCAGCCTaGGGCATTCCAGTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: KILSPAGRPMTGWSGGRPVDSPA*GIPVLG
Trigger: CCCCAGCACTGGAATGCCTCAGGCTGGGCTGTCCAC...GGGTCTCCCTCCCGACCACCCAGTCATCGGCCTTCCAGCTGGGGAGAGAATCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATAGATGCCCACGTGCCTaGGCCACCAATCCACCCAGA +
Preference number: 4 (lower is better)
Translates to: EEGAKETAFQPSPAWARDRCPRA*ATNPPR
Trigger: TCTGGGTGGATTGGTGGCTCAGGCACGTGGGCATCT...ATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp AGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGCGCTGGTTGTTGAGCTaGAGCAGCAGCTGCCTGGAG +
Preference number: 4 (lower is better)
Translates to: RRELKRPRSSPAQPGLGMRWLLS*SSSCLE
Trigger: CTCCAGGCAGCTGCTGCTGCAGCTCAACAACCAGCG...CATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCTTGAGCAGGTTGTCATaGACCACCAGGGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: ERWSRHCGDAAVVPGTVGLSRLS*TTRDLR
Trigger: CCTCAAGTCCCTGGTGGTGCATGACAACCTGCTCAA...GCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GGTGGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGTGGGTCGGAAGGCGGTaGGGCCTCCTCCAGCTTCTG +
Preference number: 4 (lower is better)
Translates to: GGRLFAFRLQNSPPLVTEWVGRR*GLLQLL
Trigger: CAGAAGCTGGAGGAGGCCGCACCGCCTTCCGACCCA...CTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGGTCATGGTCCCACGCTaGGTGAACTTCTTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: EGAKETAFQPSPAWARDGVMVPR*VNFFPQ
Trigger: CTGCGGGAAGAAGTTCACGCAGCGTGGGACCATGAC...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGTTGCTGTGCGAACTTaGCGCCGCACACCTGGCACT +
Preference number: 4 (lower is better)
Translates to: EEGAKETAFQPSPAWARDVAVRT*RRTPGT
Trigger: AGTGCCAGGTGTGCGGCGGCAAGTTCGCACAGCAAC...ATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GGTGGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGCGGCCGCCTTGTCCTaGTGCTTCAGGCTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GGRLFAFRLQNSPPLVTEAAALS*CFRLSC
Trigger: GCAGCTGAGCCTGAAGCAGCAGGACAAGGCGGCCGC...CTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGAACCCACGCCACGGCCATaGTGTGGGGGACCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: GRLFAFRLQNSPPLVTEEPTPRP*CGGPAP
Trigger: AGGAGCAGGTCCCCCACAGCATGGCCGTGGCGTGGG...TTCCTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGCCCCTCCCAAGGATCGGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGGTCAGTGACAGCCTTCTaGTCTCTCATGCCCACAGAG +
Preference number: 4 (lower is better)
Translates to: EPLPRIGRKLLGPSWAARSVTAF*SLMPTE
Trigger: CTCTGTGGGCATGAGAGAGCAGAAGGCTGTCACTGA...CCTGGCAGCCCAGGAGGGTCCCAGCAGCTTCCGCCCGATCCTTGGGAGGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGCCCCTCCCAAGGATCGGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGGCCCTTGGCACAATTCTaGCAAGACCCTTACCCTCTC +
Preference number: 4 (lower is better)
Translates to: EPLPRIGRKLLGPSWAARPLAQF*QDPYPL
Trigger: GAGAGGGTAAGGGTCTTGGCAGAATTGTGCCAAGGG...CCTGGCAGCCCAGGAGGGTCCCAGCAGCTTCCGCCCGATCCTTGGGAGGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGCCACCAACTGTGCCTTGCTGTCTaGCGGACCTGGACCTCTGTC +
Preference number: 4 (lower is better)
Translates to: GHQAPSVARKMPTCLSHQLCLAV*RTWTSV
Trigger: GACAGAGGTCCAGGTCCGGCAGACAGCAAGGCACAG...TTGGTGGCTCAGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATCCGGCGGGCTCTTCTTaGACAGGTCCAGGCCACAAA +
Preference number: 4 (lower is better)
Translates to: EEGAKETAFQPSPAWARDPAGSS*TGPGHK
Trigger: TTTGTGGCCTGGACCTGTCCAAGAAGAGCCCGCCGG...ATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp TACTGTTACTTAGCAGGGGCGACCGGTTGGCCAAAGCCTTGGTGTGCCCTTGGCGGCCAGGTGCGGGCATaGGTAGCCCTCGAGGTGGCC +
Preference number: 4 (lower is better)
Translates to: YCYLAGATGWPKPWCALGGQVRA*VALEVA
Trigger: GGCCACCTCGAGGGCTACCCATGCCCGCACCTGGCC...GCCAAGGGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGCTAAGTAACAGTA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp CCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGCCACCAATCACTGCACAGCCTGCCTaGAGGATGGGTGCGCAGCTC +
Preference number: 4 (lower is better)
Translates to: PPGAQCSTEDAHVPEPPITAQPA*RMGAQL
Trigger: GAGCTGCGCACCCATCCTCCAGGCAGGCTGTGCAGT...GATTGGTGGCTCAGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GCTGGCTACAGCAACAGCAGCTGGGCAAGCCAGATAGGCCGCCCATGCTCTCAGAAGACACGGCTAGCGTaGCACCCCCTCCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: AGYSNSSWASQIGRPCSQKTRLA*HPLPRT
Trigger: GGTCCTGGGGAGGGGGTGCCACGCTAGCCGTGTCTT...CTGAGAGCATGGGCGGCCTATCTGGCTTGCCCAGCTGCTGTTGCTGTAGCCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGCCCTCTCCCCACATCTaGAAAACCCTGGATACATTT +
Preference number: 4 (lower is better)
Translates to: PGPQGREGRAPREWETWWPSPHI*KTLDTF
Trigger: AAATGTATCCAGGGTTTTCCAGATGTGGGGAGAGGG...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR CAA 72 bp GAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTaGACGGATGACCGGAACCTGCGTGTGAAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: EEPIRLLREVVL*TDDRNLRVKAL
Trigger: GAGCGCCTTCACACGCAGGTTCCGGTCATCCGTCAACAGCACCACCTCCCGCAGTAGCCGGATTGGCTCCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GGTGGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGTCAGCTGCTCGGCCGTaGGGCGAGCCACAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: GGRLFAFRLQNSPPLVTESAARP*GEPQQR
Trigger: TCTTTGCTGTGGCTCGCCTCACGGCCGAGCAGCTGA...CTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp CTGAGAGCCCGGACGGAGGAAAGGACTGGTAGAAGAGCCAAGACACGGCTAGCGCCAGAGCCCATGGCCTaGCTGCACAGCCTGCCTGGA +
Preference number: 4 (lower is better)
Translates to: LRARTEERTGRRAKTRLAPEPMA*LHSLPG
Trigger: TCCAGGCAGGCTGTGCAGTCAGGCCATGGGCTCTGG...CGCTAGCCGTGTCTTGGCTCTTCTACCAGTCCTTTCCTCCGTCCGGGCTCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGTGCTGTTGACGGATaGCCGGAACCTGCGTGTGAA +
Preference number: 4 (lower is better)
Translates to: EEGAKETAFQPSPAWARDGAVDG*PEPACE
Trigger: TTCACACGCAGGTTCCGGTCATCCGTCAACAGCACC...ATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GTTCCTGAAAGGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTCGGGCCTTGGTTAGCTaGCCTAAGGCCTGGGACGCT +
Preference number: 4 (lower is better)
Translates to: VPERPPGAQCSTEDAHVPRALVS*PKAWDA
Trigger: AGCGTCCCAGGCCTTAGGTCAGCTAACCAAGGCCCG...AGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGGCCTTTCAGGAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp AAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTAGGCTCTTCGCCTCGGAAGAGGGCGTTCTaGACCACGATGATCACGTCG +
Preference number: 4 (lower is better)
Translates to: KGREGTAGVGDLVVGSSPRKRAF*TTMITS
Trigger: CGACGTGATCATCGTGGTGCAGAACGCCCTCTTCCG...AGGCGAAGAGCCTACCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GGTGGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGCCAGCACGTTCTTGTaGGCGCGGAAGAGGGCGTTC +
Preference number: 4 (lower is better)
Translates to: GGRLFAFRLQNSPPLVTEASTFL*ARKRAF
Trigger: GAACGCCCTCTTCCGCGCGCACAAGAACGTGCTGGC...CTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GGTGGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGCCGCCTTGTCCTGCTaGTTCAGGCTCAGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GGRLFAFRLQNSPPLVTEAALSC*FRLSCS
Trigger: CGAGCAGCTGAGCCTGAAGCAGCAGGACAAGGCGGC...CTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GTTCCTGAAAGGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTATGCTGTGGGGGACCTaGTCCTCACAGAGCCCCTCC +
Preference number: 4 (lower is better)
Translates to: VPERPPGAQCSTEDAHVPMLWGT*SSQSPS
Trigger: GGAGGGGCTCTGTGAGGAGCAGGTCCCCCACAGCAT...AGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGGCCTTTCAGGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACTTTTCTGCCTCTGGATaGGTAAAGCTTCAACCTGCT +
Preference number: 4 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHFSASG*VKLQPA
Trigger: AGCAGGTTGAAGCTTTACGCATCCAGAGGCAGAAAA...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGAACGTGCAGGAAGTGCGTaGTCTGCGCCAGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: GRLFAFRLQNSPPLVTEERAGSA*SAPAAR
Trigger: CCGAGCTGCTGGCGCAGACCACGCACTTCCTGCACG...TTCCTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp TCTCATGCCCACAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTTGACCGTGCAGGAAGTGCGTaGTCTGCGCCAGCAGCTCGG +
Preference number: 4 (lower is better)
Translates to: SHAHRGANPATAGGGAVDRAGSA*SAPAAR
Trigger: CCGAGCTGCTGGCGCAGACCACGCACTTCCTGCACG...GTCAACAGCACCACCTCCCGCAGTAGCCGGATTGGCTCCTCTGTGGGCATGAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp TACTGTTACTTAGCAGGGGCGACCGGTTGGCCAAAGCCTTGGTGTGCCCTTGGCGTGGAGCCGCCACTGTaGCGACGCTGCGGTTGTCCC +
Preference number: 4 (lower is better)
Translates to: YCYLAGATGWPKPWCALGVEPPL*RRCGCP
Trigger: GGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCAC...GCCAAGGGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGCTAAGTAACAGTA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp CCTTATCAACCTGGGTCCCTCACACTTCGCCAGTTGCGTCCCCGTGGACAGTCATTATCAGTCCCGGGGTaGGTGGGAGCGGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: PYQPGSLTLRQLRPRGQSLSVPG*VGAGVR
Trigger: CCGCACCCCCGCTCCCACCCACCCCGGGACTGATAA...TGACTGTCCACGGGGACGCAACTGGCGAAGTGTGAGGGACCCAGGTTGATAAGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp CTGAGAGCCCGGACGGAGGAAAGGACTGGTAGAAGAGCCAAGACACGGCTAGCGAGGCCGATGACTGGGTaGTCGGGAGGGAGACCCAGC +
Preference number: 4 (lower is better)
Translates to: LRARTEERTGRRAKTRLARPMTG*SGGRPS
Trigger: GCTGGGTCTCCCTCCCGACCACCCAGTCATCGGCCT...CGCTAGCCGTGTCTTGGCTCTTCTACCAGTCCTTTCCTCCGTCCGGGCTCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGCCACCAACCTTGCCCCTTTAGCTaGTACCTCAGTGGGGAGGCT +
Preference number: 4 (lower is better)
Translates to: GHQAPSVARKMPTCLSHQPCPFS*YLSGEA
Trigger: AGCCTCCCCACTGAGGTACCAGCTAAAGGGGCAAGG...TTGGTGGCTCAGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATCTCAGTTTAGGGTCCTaGGAGGCTGACGGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: EEGAKETAFQPSPAWARDLSLGS*EADGFG
Trigger: CCCAAACCCGTCAGCCTCCCAGGACCCTAAACTGAG...ATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp CTGAGAGCCCGGACGGAGGAAAGGACTGGTAGAAGAGCCAAGACACGGCTAGCGTGGTGCGCTGGTTGTTaGGCTGCAGCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: LRARTEERTGRRAKTRLAWCAGC*AAAAAA
Trigger: GGCAGCTGCTGCTGCAGCTCAACAACCAGCGCACCA...CGCTAGCCGTGTCTTGGCTCTTCTACCAGTCCTTTCCTCCGTCCGGGCTCTCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp AGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGCGTTCTGCACCACGATaGTCACGTCGCACAAGAAGC +
Preference number: 4 (lower is better)
Translates to: RRELKRPRSSPAQPGLGMRSAPR*SRRTRS
Trigger: GCTTCTTGTGCGACGTGATCATCGTGGTGCAGAACG...CATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp GAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATCGGGGAGATTCACAGTaGGAATGGGTGTGGTCGCAA +
Preference number: 4 (lower is better)
Translates to: EEGAKETAFQPSPAWARDRGDSQ*EWVWSQ
Trigger: TTGCGACCACACCCATTCTCACTGTGAATCTCCCCG...ATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGGCCACTTGTGCAAAATaGGGAACTTCACATTATCAG +
Preference number: 4 (lower is better)
Translates to: PGPQGREGRAPREWETWWATCAK*GTSHYQ
Trigger: CTGATAATGTGAAGTTCCTCATTTTGCACAAGTGGC...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp GAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATACAGGGCAGGGGTTCTaGGTTTCCGTCAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: EEGAKETAFQPSPAWARDTGQGF*VSVRCS
Trigger: ACTGCATCTGACGGAAACTCAGAACCCCTGCCCTGT...ATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GGTGGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGCCACATTCTCCAGGGTaGGAAGAGCAGCCAGCCCTC +
Preference number: 4 (lower is better)
Translates to: GGRLFAFRLQNSPPLVTEPHSPG*EEQPAL
Trigger: GAGGGCTGGCTGCTCTTCTCACCCTGGAGAATGTGG...CTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp AAGGAAGGGTTGGCCCTGGGGCTAGTGCCACTTGTGCAAAATGAGGAACTTCACGTCCCGGGCTGCCGCTaGCGCCGCGAAATGGGTCGG +
Preference number: 4 (lower is better)
Translates to: KEGLALGLVPLVQNEELHVPGCR*RREMGR
Trigger: CCGACCCATTTCGCGGCGGCAGCGGCAGCCCGGGAC...GTGAAGTTCCTCATTTTGCACAAGTGGCACTAGCCCCAGGGCCAACCCTTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GGTGGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGCGGTCTCCTCGCTGCTaGTCTTGTAGTCGTCGCCGT +
Preference number: 4 (lower is better)
Translates to: GGRLFAFRLQNSPPLVTERSPRC*SCSRRR
Trigger: ACGGCGACGACTACAAGAGCAGCAGCGAGGAGACCG...CTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp AAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTAGGCTCTTCGCCTCCTTGCCGCACGGAATaGACACGTACAGGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: KGREGTAGVGDLVVGSSPPCRTE*TRTGCH
Trigger: GTGACAACCTGTACGTGTGCATTCCGTGCGGCAAGG...AGGCGAAGAGCCTACCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGACACACCCTTCCTGCTaGTCCTCTTCCTGCCCTTAT +
Preference number: 4 (lower is better)
Translates to: EGAKETAFQPSPAWARDGTHPSC*SSSCPY
Trigger: ATAAGGGCAGGAAGAGGAGCAGCAGGAAGGGTGTGT...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GTTCCTGAAAGGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGGGGCGCTCTAGGTaGGAGAGAAACGGTCGATGG +
Preference number: 4 (lower is better)
Translates to: VPERPPGAQCSTEDAHVPEGRSR*ERNGRW
Trigger: CCATCGACCGTTTCTCTCCCACCTAGAGCGCCCCTC...AGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGGCCTTTCAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp AAGATTCTCTCCCCAGCTGGAAGGCCGATGACTGGGTGGTCGGGAGGGAGACCCGAAGACTGGGCTCTTTaGAGTACAGGGTCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: KILSPAGRPMTGWSGGRPEDWAL*STGSPA
Trigger: GGCCGGGGACCCTGTACTCCAAAGAGCCCAGTCTTC...GGGTCTCCCTCCCGACCACCCAGTCATCGGCCTTCCAGCTGGGGAGAGAATCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp CCCTGGGCCCCCACCTCTTCTACCATCCACCCCAGACTTACCACACACCCTTCCATACCCCAGAGCCCATaGCCTGACTGCACAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PWAPTSSTIHPRLTTHPSIPQSP*PDCTAC
Trigger: GCAGGCTGTGCAGTCAGGCCATGGGCTCTGGGGTAT...GGAAGGGTGTGTGGTAAGTCTGGGGTGGATGGTAGAAGAGGTGGGGGCCCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GTGAGGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCCACTTGTGCAAAATaGGGAACTTCACATTATCAG +
Preference number: 4 (lower is better)
Translates to: VRPPRGGAATVATLRLSRATCAK*GTSHYQ
Trigger: CTGATAATGTGAAGTTCCTCATTTTGCACAAGTGGC...CCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp CTGAGAGCCCGGACGGAGGAAAGGACTGGTAGAAGAGCCAAGACACGGCTAGCGACTCCCCGCCCTTGGTaGCTGAGGAAGGAAGGGTTG +
Preference number: 4 (lower is better)
Translates to: LRARTEERTGRRAKTRLATPRPW*LRKEGL
Trigger: CAACCCTTCCTTCCTCAGTCACCAAGGGCGGGGAGT...CGCTAGCCGTGTCTTGGCTCTTCTACCAGTCCTTTCCTCCGTCCGGGCTCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp TACTGTTACTTAGCAGGGGCGACCGGTTGGCCAAAGCCTTGGTGTGCCCTTGGCGCCTCTGCACCTGTGTaGGGGTGGCCCTTTCTGGCT +
Preference number: 4 (lower is better)
Translates to: YCYLAGATGWPKPWCALGASAPV*GWPFLA
Trigger: AGCCAGAAAGGGCCACCCTCACACAGGTGCAGAGGC...GCCAAGGGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGCTAAGTAACAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp AAGATTCTCTCCCCAGCTGGAAGGCCGATGACTGGGTGGTCGGGAGGGAGACCCACCGGAACCTGCGTGTaGAGGCGCTCACAAGGAATG +
Preference number: 4 (lower is better)
Translates to: KILSPAGRPMTGWSGGRPTGTCV*RRSQGM
Trigger: CATTCCTTGTGAGCGCCTTCACACGCAGGTTCCGGT...GGGTCTCCCTCCCGACCACCCAGTCATCGGCCTTCCAGCTGGGGAGAGAATCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp AAGGAAGGGTTGGCCCTGGGGCTAGTGCCACTTGTGCAAAATGAGGAACTTCACAGCTGCAGCAGCAGCTaGCTGGAGTGGCCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: KEGLALGLVPLVQNEELHSCSSS*LEWPGA
Trigger: GGCGCCCGGCCACTCCAGGCAGCTGCTGCTGCAGCT...GTGAAGTTCCTCATTTTGCACAAGTGGCACTAGCCCCAGGGCCAACCCTTCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGCGGTGTTGTGATCTGGGGGCCAGCCATGTGGTAAAAAGGAGTAGAGGTCAAAGCTGCAGCAGCAGCTaGCTGGAGTGGCCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: ERCCDLGASHVVKRSRGQSCSSS*LEWPGA
Trigger: GGCGCCCGGCCACTCCAGGCAGCTGCTGCTGCAGCT...TTGACCTCTACTCCTTTTTACCACATGGCTGGCCCCCAGATCACAACACCGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp CTGTCCTCAGTGACAGCCTTCTGCTCTCTCATGCCCACAGAGGAGCCAATCCGGTACAGCTCGGCGCAGTaGGTGTTGACCGCGGCCTCT +
Preference number: 4 (lower is better)
Translates to: LSSVTAFCSLMPTEEPIRYSSAQ*VLTAAS
Trigger: AGAGGCCGCGGTCAACACGCACTGCGCCGAGCTGTA...CCGGATTGGCTCCTCTGTGGGCATGAGAGAGCAGAAGGCTGTCACTGAGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGAATCTTCCCGCAGATGGTaGATGGGTAGGGCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: GRLFAFRLQNSPPLVTEESSRRW*MGRAGS
Trigger: TGACCCGGCCCTACCCATGCACCATCTGCGGGAAGA...TTCCTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGAAGTTGCTGTGCGAACTTaGCGCCGCACACCTGGCACT +
Preference number: 4 (lower is better)
Translates to: GRLFAFRLQNSPPLVTEEVAVRT*RRTPGT
Trigger: AGTGCCAGGTGTGCGGCGGCAAGTTCGCACAGCAAC...TTCCTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CTGTCCTCAGTGACAGCCTTCTGCTCTCTCATGCCCACAGAGGAGCCAATCCGGGCCACCTTGGGGTCGTaGAGGAAGTGCGTGGTCTGC +
Preference number: 4 (lower is better)
Translates to: LSSVTAFCSLMPTEEPIRATLGS*RKCVVC
Trigger: GCAGACCACGCACTTCCTGCACGACCCCAAGGTGGC...CCGGATTGGCTCCTCTGTGGGCATGAGAGAGCAGAAGGCTGTCACTGAGGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp TACTGTTACTTAGCAGGGGCGACCGGTTGGCCAAAGCCTTGGTGTGCCCTTGGCGGCCGCCGGGGCGCATaGAATAAATATGGTCCGGGG +
Preference number: 4 (lower is better)
Translates to: YCYLAGATGWPKPWCALGGRRGA*NKYGPG
Trigger: CCCCGGACCATATTTATTGCATGCGCCCCGGCGGCC...GCCAAGGGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGCTAAGTAACAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp CCCTGGGCCCCCACCTCTTCTACCATCCACCCCAGACTTACCACACACCCTTCCACCACACACCCTTCCTaGTGCTCCTCTTCCTGCCCT +
Preference number: 4 (lower is better)
Translates to: PWAPTSSTIHPRLTTHPSTTHPS*CSSSCP
Trigger: AGGGCAGGAAGAGGAGCAGCAGGAAGGGTGTGTGGT...GGAAGGGTGTGTGGTAAGTCTGGGGTGGATGGTAGAAGAGGTGGGGGCCCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp TACTGTTACTTAGCAGGGGCGACCGGTTGGCCAAAGCCTTGGTGTGCCCTTGGCCCCAGCACACTCTCCTaGGGGGCATGTCGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: YCYLAGATGWPKPWCALGPSTLS*GACRKP
Trigger: GGGCTTTCGACATGCCCCCCAGGAGAGTGTGCTGGG...GCCAAGGGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGCTAAGTAACAGTA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGAAGAGGAAAGGGGCATCTaGTCTCAGGCCCGTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GRLFAFRLQNSPPLVTEEEERGI*SQARAL
Trigger: GAGAGCACGGGCCTGAGACCAGATGCCCCTTTCCTC...TTCCTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GTGAGGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGTGTTCAAGAGGCTTTaGTTAAGTCAGGAAGAAGTG +
Preference number: 4 (lower is better)
Translates to: VRPPRGGAATVATLRLSRVFKRL*LSQEEV
Trigger: CACTTCTTCCTGACTTAACCAAAGCCTCTTGAACAC...CCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGATTTAGCAGGGAGGTaGCTGGCTACAGCAACAGCA +
Preference number: 4 (lower is better)
Translates to: EEGAKETAFQPSPAWARDDLAGR*LATATA
Trigger: TGCTGTTGCTGTAGCCAGCCACCTCCCTGCTAAATC...ATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGTAGGGGTAGCAGGCCTGGATaGCCGGCGTGGCGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: GSSIENGSGSGRACVQGRGSRPG*PAWRPA
Trigger: TGCGGGCCGCCACGCCGGTCATCCAGGCCTGCTACC...CCTACCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp TCCTTTAAGATTCTCTCCCCAGCTGGAAGGCCGATGACTGGGTGGTCGGGAGGGGTCTCATTCCAAGGCTaGGGGAGGGCCTTCTCGCCT +
Preference number: 4 (lower is better)
Translates to: SFKILSPAGRPMTGWSGGVSFQG*GRAFSP
Trigger: AGGCGAGAAGGCCCTCCCTCAGCCTTGGAATGAGAC...CCCTCCCGACCACCCAGTCATCGGCCTTCCAGCTGGGGAGAGAATCTTAAAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGAACGGAAGAGGGCGTTCTaGACCACGATGATCACGTCG +
Preference number: 4 (lower is better)
Translates to: GRLFAFRLQNSPPLVTEERKRAF*TTMITS
Trigger: CGACGTGATCATCGTGGTGCAGAACGCCCTCTTCCG...TTCCTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CTGTCCTCAGTGACAGCCTTCTGCTCTCTCATGCCCACAGAGGAGCCAATCCGGCGGTCTCCTCGCTGCTaGTCTTGTAGTCGTCGCCGT +
Preference number: 4 (lower is better)
Translates to: LSSVTAFCSLMPTEEPIRRSPRC*SCSRRR
Trigger: ACGGCGACGACTACAAGAGCAGCAGCGAGGAGACCG...CCGGATTGGCTCCTCTGTGGGCATGAGAGAGCAGAAGGCTGTCACTGAGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGAATACCGGTCTCCTCGCTaGTGCTCTTGTAGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: GRLFAFRLQNSPPLVTEEYRSPR*CSCSRR
Trigger: GCGACGACTACAAGAGCAGCAGCGAGGAGACCGGTA...TTCCTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CAGACCCCTGCCAGCAATGTCGGGCCTTGGTTAGCTGACCTAAGGCCTGGGACGTGCTGCTCCTCTTCCTaGCCTTATCAACCTGGGTCC +
Preference number: 4 (lower is better)
Translates to: QTPASNVGPWLADLRPGTCCSSS*PYQPGS
Trigger: GGACCCAGGTTGATAAGGGCAGGAAGAGGAGCAGCA...CGTCCCAGGCCTTAGGTCAGCTAACCAAGGCCCGACATTGCTGGCAGGGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GGTGGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGTGGCAGTACTTGCCGTaGCGCTTGAGGCGTTTCTTG +
Preference number: 4 (lower is better)
Translates to: GGRLFAFRLQNSPPLVTEWQYLP*RLRRFL
Trigger: CAAGAAACGCCTCAAGCGCCACGGCAAGTACTGCCA...CTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGTAGGCCGCCGCCCCGCAGGTaGCAGTACTTGCCGTGGCGC +
Preference number: 4 (lower is better)
Translates to: GSSIENGSGSGRACVQGRPPPRR*QYLPWR
Trigger: GCGCCACGGCAAGTACTGCCACCTGCGGGGCGGCGG...CCTACCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp AAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTAGGCTCTTCGCCTAAATGGAAGCGGCTCTaGAAGAGCCTGTGTACAAGG +
Preference number: 4 (lower is better)
Translates to: KGREGTAGVGDLVVGSSPKWKRL*KSLCTR
Trigger: CCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTT...AGGCGAAGAGCCTACCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCTGCTTTATTGCTGTTTaGTTCGAGTATAGAAAATGG +
Preference number: 4 (lower is better)
Translates to: TVATLRLSRAQWALRAAPCFIAV*FEYRKW
Trigger: CCATTTTCTATACTCGAACCAAACAGCAATAAAGCA...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp AAGGAAGGGTTGGCCCTGGGGCTAGTGCCACTTGTGCAAAATGAGGAACTTCACGTCGGTCTGTCCTGCTaGTCCGTCCTCCCCGCGTCC +
Preference number: 4 (lower is better)
Translates to: KEGLALGLVPLVQNEELHVGLSC*SVLPAS
Trigger: GGACGCGGGGAGGACGGACCAGCAGGACAGACCGAC...GTGAAGTTCCTCATTTTGCACAAGTGGCACTAGCCCCAGGGCCAACCCTTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp CTGAGAGCCCGGACGGAGGAAAGGACTGGTAGAAGAGCCAAGACACGGCTAGCGAGAAACTTCCAGGCGTaGACAGCCCAGCCTGAGGCA +
Preference number: 4 (lower is better)
Translates to: LRARTEERTGRRAKTRLARNFQA*TAQPEA
Trigger: TGCCTCAGGCTGGGCTGTCCACGCCTGGAAGTTTCT...CGCTAGCCGTGTCTTGGCTCTTCTACCAGTCCTTTCCTCCGTCCGGGCTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp AAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTAGGCTCTTCGCCTTACACAGGTCTTCCCTaGGGTACAAGACGGAGAACT +
Preference number: 4 (lower is better)
Translates to: KGREGTAGVGDLVVGSSPYTGLP*GTRRRT
Trigger: AGTTCTCCGTCTTGTACCCCAGGGAAGACCTGTGTA...AGGCGAAGAGCCTACCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp AAGGAAGGGTTGGCCCTGGGGCTAGTGCCACTTGTGCAAAATGAGGAACTTCACCCGTGGAACCGTTCCTaGAAGGCCACCAGGCGCCCA +
Preference number: 4 (lower is better)
Translates to: KEGLALGLVPLVQNEELHPWNRS*KATRRP
Trigger: TGGGCGCCTGGTGGCCTTTCAGGAACGGTTCCACGG...GTGAAGTTCCTCATTTTGCACAAGTGGCACTAGCCCCAGGGCCAACCCTTCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GTTTGGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGGCTCGGGTCCCGGGCTaGCGCTGCCGCCGCGAAATG +
Preference number: 4 (lower is better)
Translates to: VWFEYRKWKRLWKSLCTRARVPG*RCRREM
Trigger: CATTTCGCGGCGGCAGCGGCAGCCCGGGACCCGAGC...CCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACCAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp ACGGATGACCGGAACCTGCGTGTGAAGGCGCTCACAAGGAATGTTCCTGTACGGTCTTCCCGCAGATGGTaGATGGGTAGGGCCGGGTCA +
Preference number: 4 (lower is better)
Translates to: TDDRNLRVKALTRNVPVRSSRRW*MGRAGS
Trigger: TGACCCGGCCCTACCCATGCACCATCTGCGGGAAGA...CCGTACAGGAACATTCCTTGTGAGCGCCTTCACACGCAGGTTCCGGTCATCCGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp CCTTATCAACCTGGGTCCCTCACACTTCGCCAGTTGCGTCCCCGTGGACAGTCACCATCCAGGTCCTTGTaGAGGGGCAGAAGAGAGCAG +
Preference number: 4 (lower is better)
Translates to: PYQPGSLTLRQLRPRGQSPSRSL*RGRREQ
Trigger: CTGCTCTCTTCTGCCCCTGCACAAGGACCTGGATGG...TGACTGTCCACGGGGACGCAACTGGCGAAGTGTGAGGGACCCAGGTTGATAAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCGCCGCCCCGCAGGTaGCAGTACTTGCCGTGGCGC +
Preference number: 4 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQPPPRR*QYLPWR
Trigger: GCGCCACGGCAAGTACTGCCACCTGCGGGGCGGCGG...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGCGGTGTTGTGATCTGGGGGCCAGCCATGTGGTAAAAAGGAGTAGAGGTCAACCCGCAGATGGTGCATaGGTAGGGCCGGGTCAGCCA +
Preference number: 4 (lower is better)
Translates to: ERCCDLGASHVVKRSRGQPADGA*VGPGQP
Trigger: TGGCTGACCCGGCCCTACCCATGCACCATCTGCGGG...TTGACCTCTACTCCTTTTTACCACATGGCTGGCCCCCAGATCACAACACCGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGGCCTGGGGTCTCCTTTaGTCAAAGCTGATATCAAAA +
Preference number: 4 (lower is better)
Translates to: EGAKETAFQPSPAWARDGAWGLL*SKLISK
Trigger: TTTTGATATCAGCTTTGACCAAAGGAGACCCCAGGC...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp TACTGTTACTTAGCAGGGGCGACCGGTTGGCCAAAGCCTTGGTGTGCCCTTGGCGATTCTCTCCCCAGCTaGAAGGCCGATGACTGGGTG +
Preference number: 4 (lower is better)
Translates to: YCYLAGATGWPKPWCALGDSLPS*KADDWV
Trigger: CACCCAGTCATCGGCCTTCCAGCTGGGGAGAGAATC...GCCAAGGGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGCTAAGTAACAGTA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp CCCTGGGCCCCCACCTCTTCTACCATCCACCCCAGACTTACCACACACCCTTCCGGTTGGCCAAAGCCTTaGTGTGCCCTTGGCACAATT +
Preference number: 4 (lower is better)
Translates to: PWAPTSSTIHPRLTTHPSGWPKP*CALGTI
Trigger: AATTGTGCCAAGGGCACACCAAGGCTTTGGCCAACC...GGAAGGGTGTGTGGTAAGTCTGGGGTGGATGGTAGAAGAGGTGGGGGCCCAGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGCCCCTCCCAAGGATCGGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGGTACAAGACGGAGAACTaGGATCATCATCTTAACTCT +
Preference number: 4 (lower is better)
Translates to: EPLPRIGRKLLGPSWAARYKTEN*DHHLNS
Trigger: AGAGTTAAGATGATGATCCCAGTTCTCCGTCTTGTA...CCTGGCAGCCCAGGAGGGTCCCAGCAGCTTCCGCCCGATCCTTGGGAGGGGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GTTCCTGAAAGGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTAGCAATGTCGGGCCTTaGTTAGCTGACCTAAGGCCT +
Preference number: 4 (lower is better)
Translates to: VPERPPGAQCSTEDAHVPSNVGP*LADLRP
Trigger: AGGCCTTAGGTCAGCTAACCAAGGCCCGACATTGCT...AGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGGCCTTTCAGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGAGCTGCAGCAGCAGCTaGCTGGAGTGGCCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQSCSSS*LEWPGA
Trigger: GGCGCCCGGCCACTCCAGGCAGCTGCTGCTGCAGCT...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCGGTCGGTCTGTCCTaGTGGTCCGTCCTCCCCGCG +
Preference number: 4 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQPVGLS*WSVLPA
Trigger: CGCGGGGAGGACGGACCAGCAGGACAGACCGACCGG...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGTAGGAGCAGCTGCCTGGAGTaGCCGGGCGCCTCCATCGTG +
Preference number: 4 (lower is better)
Translates to: GSSIENGSGSGRACVQGRSSCLE*PGASIV
Trigger: CACGATGGAGGCGCCCGGCCACTCCAGGCAGCTGCT...CCTACCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GTTTGGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGGAGGCCGCCGAGAGGTaGAGCCGCCACTGTGGCGAC +
Preference number: 4 (lower is better)
Translates to: VWFEYRKWKRLWKSLCTREAAER*SRHCGD
Trigger: GTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTC...CCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACCAAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGCCTGGGGTCTCCTTTaGTCAAAGCTGATATCAAAA +
Preference number: 4 (lower is better)
Translates to: EEGAKETAFQPSPAWARDAWGLL*SKLISK
Trigger: TTTTGATATCAGCTTTGACCAAAGGAGACCCCAGGC...ATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGTAGGTTATCAGTCCCGGGGTaGGTGGGAGCGGGGGTGCGG +
Preference number: 4 (lower is better)
Translates to: GSSIENGSGSGRACVQGRLSVPG*VGAGVR
Trigger: CCGCACCCCCGCTCCCACCCACCCCGGGACTGATAA...CCTACCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp TCCTTTAAGATTCTCTCCCCAGCTGGAAGGCCGATGACTGGGTGGTCGGGAGGGTTGCTGATCTGTTTCTaGGACTGGGGAGGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: SFKILSPAGRPMTGWSGGLLICF*DWGGRQ
Trigger: CTGCCTCCCTCCCCAGTCCCAGAAACAGATCAGCAA...CCCTCCCGACCACCCAGTCATCGGCCTTCCAGCTGGGGAGAGAATCTTAAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGTAGGGGCGGCCGGTGTAGATaGAGTCCAGCACCAGGCGGA +
Preference number: 4 (lower is better)
Translates to: GSSIENGSGSGRACVQGRGGRCR*SPAPGG
Trigger: TCCGCCTGGTGCTGGACTTCATCTACACCGGCCGCC...CCTACCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp GAGCGGTGTTGTGATCTGGGGGCCAGCCATGTGGTAAAAAGGAGTAGAGGTCAAACTTGCCGTGGCGCTTaGGGCGTTTCTTGCACAGCG +
Preference number: 4 (lower is better)
Translates to: ERCCDLGASHVVKRSRGQTCRGA*GVSCTA
Trigger: CGCTGTGCAAGAAACGCCTCAAGCGCCACGGCAAGT...TTGACCTCTACTCCTTTTTACCACATGGCTGGCCCCCAGATCACAACACCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GTTTGGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGGGCCCAGCTCGGCCGTaGACTTGGCCAGCGGGTAGA +
Preference number: 4 (lower is better)
Translates to: VWFEYRKWKRLWKSLCTRGPARP*TWPAGR
Trigger: TCTACCCGCTGGCCAAGTTCACGGCCGAGCTGGGCC...CCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGAGCAGTGAGGCCAGGTaGGGCCGCCGAGAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQSSEAR*GRREVE
Trigger: CTCCACCTCTCGGCGGCCTCACCTGGCCTCACTGCT...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGGGCTGGGGTCCTCGCTaGTACCGGTCTCCTCGCTGC +
Preference number: 4 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQGWGPR*YRSPRC
Trigger: GCAGCGAGGAGACCGGTAGCAGCGAGGACCCCAGCC...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp GGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGTAGGGGGTCGTGCAGGAAGTaGGTGGTCTGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: GSSIENGSGSGRACVQGRGSCRK*VVCASS
Trigger: GCTGCTGGCGCAGACCACGCACTTCCTGCACGACCC...CCTACCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCACTCCCCAACTCTaGCCGACGCTCCGACCCCAG +
Preference number: 4 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQPTPQL*PTLRPQ
Trigger: CTGGGGTCGGAGCGTCGGGCAGAGTTGGGGAGTGGG...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp AAGGAAGGGTTGGCCCTGGGGCTAGTGCCACTTGTGCAAAATGAGGAACTTCACGTGTCCAGCATCGTCTaGCCAGCACACTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: KEGLALGLVPLVQNEELHVSSIV*PAHSPG
Trigger: CCCAGGAGAGTGTGCTGGGCAGACGATGCTGGACAC...GTGAAGTTCCTCATTTTGCACAAGTGGCACTAGCCCCAGGGCCAACCCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp AAGGAAGGGTTGGCCCTGGGGCTAGTGCCACTTGTGCAAAATGAGGAACTTCACAGCCCATGGCCTGACTaGACAGCCTGCCTGGAGGAT +
Preference number: 4 (lower is better)
Translates to: KEGLALGLVPLVQNEELHSPWPD*TACLED
Trigger: ATCCTCCAGGCAGGCTGTGCAGTCAGGCCATGGGCT...GTGAAGTTCCTCATTTTGCACAAGTGGCACTAGCCCCAGGGCCAACCCTTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGCGGTGTTGTGATCTGGGGGCCAGCCATGTGGTAAAAAGGAGTAGAGGTCAACGGAAGATGCCCACGTaGCTGAGCCACCAATCCACC +
Preference number: 4 (lower is better)
Translates to: ERCCDLGASHVVKRSRGQRKMPT*LSHQST
Trigger: GGTGGATTGGTGGCTCAGGCACGTGGGCATCTTCCG...TTGACCTCTACTCCTTTTTACCACATGGCTGGCCCCCAGATCACAACACCGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGGGCTTGAGGCCCAGGTaGCTGCGCATGTGGCGCGTC +
Preference number: 4 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQGLRPR*LRMWRV
Trigger: GACGCGCCACATGCGCAGCCACCTGGGCCTCAAGCC...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGAAAAATGGAAGCGGCTCTaGAAGAGCCTGTGTACAAGG +
Preference number: 4 (lower is better)
Translates to: GRLFAFRLQNSPPLVTEEKWKRL*KSLCTR
Trigger: CCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTT...TTCCTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCTGCTTTATTGCTGTTTaGTTCGAGTATAGAAAATGG +
Preference number: 4 (lower is better)
Translates to: ERWSRHCGDAAVVPGTVGCFIAV*FEYRKW
Trigger: CCATTTTCTATACTCGAACCAAACAGCAATAAAGCA...GCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp CTTCCCTGGGGTACAAGACGGAGAACTGGGATCATCATCTTAACTCTACTCTTCTGTCCCCAGTCTCCCTaGGGCCTGGACTCGCCCATG +
Preference number: 4 (lower is better)
Translates to: LPWGTRRRTGIIILTLLFCPQSP*GLDSPM
Trigger: CATGGGCGAGTCCAGGCCTCAGGGAGACTGGGGACA...GAAGAGTAGAGTTAAGATGATGATCCCAGTTCTCCGTCTTGTACCCCAGGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GAGCGGTGTTGTGATCTGGGGGCCAGCCATGTGGTAAAAAGGAGTAGAGGTCAAGTCATGGTCCCACGCTaGGTGAACTTCTTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: ERCCDLGASHVVKRSRGQVMVPR*VNFFPQ
Trigger: CTGCGGGAAGAAGTTCACGCAGCGTGGGACCATGAC...TTGACCTCTACTCCTTTTTACCACATGGCTGGCCCCCAGATCACAACACCGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GTTTGGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGTGCTTCAGGCTCAGCTaGTCGGCCGTGAGGCGAGCC +
Preference number: 4 (lower is better)
Translates to: VWFEYRKWKRLWKSLCTRCFRLS*SAVRRA
Trigger: GGCTCGCCTCACGGCCGAGCAGCTGAGCCTGAAGCA...CCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGGGGTCGTGCAGGAAGTaGGTGGTCTGCGCCAGCAGC +
Preference number: 4 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQGSCRK*VVCASS
Trigger: GCTGCTGGCGCAGACCACGCACTTCCTGCACGACCC...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGCGGGTGGCCTCCACCTaGTCCCTCTCTCCTCACTGG +
Preference number: 4 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQRVAST*SLSPHW
Trigger: CCAGTGAGGAGAGAGGGAGCAGGTGGAGGCCACCCG...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp CCCAGCGGGCGCAGCCCATCCAGGTCCTTGTGCAGGGGCAGAAGAGAGCAGCGGAATGAAAGATATCTGTaGCACTATAGCAAGACCTTT +
Preference number: 4 (lower is better)
Translates to: PSGRSPSRSLCRGRREQRNERYL*HYSKTF
Trigger: AAAGGTCTTGCTATAGTGGCACAGATATCTTTCATT...CCGCTGCTCTCTTCTGCCCCTGCACAAGGACCTGGATGGGCTGCGCCCGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp TCCTTTAAGATTCTCTCCCCAGCTGGAAGGCCGATGACTGGGTGGTCGGGAGGGAAATGGAAGCGGCTCTaGAAGAGCCTGTGTACAAGG +
Preference number: 4 (lower is better)
Translates to: SFKILSPAGRPMTGWSGGKWKRL*KSLCTR
Trigger: CCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTT...CCCTCCCGACCACCCAGTCATCGGCCTTCCAGCTGGGGAGAGAATCTTAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp TCCTTTAAGATTCTCTCCCCAGCTGGAAGGCCGATGACTGGGTGGTCGGGAGGGAGAGTCTCAGAAGACTaGGCTCTTTGGAGTACAGGG +
Preference number: 4 (lower is better)
Translates to: SFKILSPAGRPMTGWSGGRVSED*ALWSTG
Trigger: CCCTGTACTCCAAAGAGCCCAGTCTTCTGAGACTCT...CCCTCCCGACCACCCAGTCATCGGCCTTCCAGCTGGGGAGAGAATCTTAAAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GTTTGGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGTGGTGCGCTGGTTGTTaGGCTGCAGCAGCAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VWFEYRKWKRLWKSLCTRWCAGC*AAAAAA
Trigger: GGCAGCTGCTGCTGCAGCTCAACAACCAGCGCACCA...CCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp GGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGAATTCCGTCAGATGCAGTaGAATCACAGTTCCCTTTCA +
Preference number: 4 (lower is better)
Translates to: GRLFAFRLQNSPPLVTEEFRQMQ*NHSSLS
Trigger: TGAAAGGGAACTGTGATTTCACTGCATCTGACGGAA...TTCCTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp CTTCCCTGGGGTACAAGACGGAGAACTGGGATCATCATCTTAACTCTACTCTTCGGGAGAGCGGTGTTGTaGTCTGGGGGCCAGCCATGT +
Preference number: 4 (lower is better)
Translates to: LPWGTRRRTGIIILTLLFGRAVL*SGGQPC
Trigger: ACATGGCTGGCCCCCAGATCACAACACCGCTCTCCC...GAAGAGTAGAGTTAAGATGATGATCCCAGTTCTCCGTCTTGTACCCCAGGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GTTTGGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGGCAGGTCCAAGCCTCTaGACCTGTGTGAGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: VWFEYRKWKRLWKSLCTRAGPSL*TCVRVA
Trigger: GGCCACCCTCACACAGGTGCAGAGGCTTGGACCTGC...CCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACCAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGGAGGCGGGAGGGGCCTaGGGTCTCCTTTGGTCAAAG +
Preference number: 4 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQEAGGA*GLLWSK
Trigger: CTTTGACCAAAGGAGACCCCAGGCCCCTCCCGCCTC...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp GGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGAAGTGAGTGCTTGTCCCTaGCTTAAATTCTCTCCAATG +
Preference number: 4 (lower is better)
Translates to: GRLFAFRLQNSPPLVTEEVSACP*LKFSPM
Trigger: CATTGGAGAGAATTTAAGCCAGGGACAAGCACTCAC...TTCCTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGACTTGCCGTGGCGCTTaGGGCGTTTCTTGCACAGCG +
Preference number: 4 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQTCRGA*GVSCTA
Trigger: CGCTGTGCAAGAAACGCCTCAAGCGCCACGGCAAGT...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGTGGTCCCACGCTGCGTaGACTTCTTCCCGCAGATGG +
Preference number: 4 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQWSHAA*TSSRRW
Trigger: CCATCTGCGGGAAGAAGTTCACGCAGCGTGGGACCA...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp AGACCCAGCTCTCCTTTCTGTCCCGTTTGCAGCACTGGTTTTGTTTCCTTAATATCAGCTGCTCGGCCGTaGGGCGAGCCACAGCAAAGA +
Preference number: 4 (lower is better)
Translates to: RPSSPFCPVCSTGFVSLISAARP*GEPQQR
Trigger: TCTTTGCTGTGGCTCGCCTCACGGCCGAGCAGCTGA...TATTAAGGAAACAAAACCAGTGCTGCAAACGGGACAGAAAGGAGAGCTGGGTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp CTTCCCTGGGGTACAAGACGGAGAACTGGGATCATCATCTTAACTCTACTCTTCTGGAGCTGGCAAGCCTaGGACTGCTCAGGTCCGACA +
Preference number: 4 (lower is better)
Translates to: LPWGTRRRTGIIILTLLFWSWQA*DCSGPT
Trigger: TGTCGGACCTGAGCAGTCTCAGGCTTGCCAGCTCCA...GAAGAGTAGAGTTAAGATGATGATCCCAGTTCTCCGTCTTGTACCCCAGGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp AAGGAAGGGTTGGCCCTGGGGCTAGTGCCACTTGTGCAAAATGAGGAACTTCACTTGAGCAGGTTGTCATaGACCACCAGGGACTTGAGG +
Preference number: 4 (lower is better)
Translates to: KEGLALGLVPLVQNEELHLSRLS*TTRDLR
Trigger: CCTCAAGTCCCTGGTGGTGCATGACAACCTGCTCAA...GTGAAGTTCCTCATTTTGCACAAGTGGCACTAGCCCCAGGGCCAACCCTTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGGAGGTTGCGTTGCTGTaGGAACTTGCCGCCGCACAC +
Preference number: 4 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQEVALL*ELAAAH
Trigger: GTGTGCGGCGGCAAGTTCGCACAGCAACGCAACCTC...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp ACGGATGACCGGAACCTGCGTGTGAAGGCGCTCACAAGGAATGTTCCTGTACGGCGTAAAGCTTCAACCTaGTGGCTTTTAGAGGGAGAG +
Preference number: 4 (lower is better)
Translates to: TDDRNLRVKALTRNVPVRRKAST*WLLEGE
Trigger: CTCTCCCTCTAAAAGCCAGCAGGTTGAAGCTTTACG...CCGTACAGGAACATTCCTTGTGAGCGCCTTCACACGCAGGTTCCGGTCATCCGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp AAGGAAGGGTTGGCCCTGGGGCTAGTGCCACTTGTGCAAAATGAGGAACTTCACCCTCTCTACTACCCATaGCAGGAACCTAGTACAGGT +
Preference number: 4 (lower is better)
Translates to: KEGLALGLVPLVQNEELHPLYYP*QEPSTG
Trigger: ACCTGTACTAGGTTCCTGCCATGGGTAGTAGAGAGG...GTGAAGTTCCTCATTTTGCACAAGTGGCACTAGCCCCAGGGCCAACCCTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp CCCTGGGCCCCCACCTCTTCTACCATCCACCCCAGACTTACCACACACCCTTCCACATCTGGAAAACCCTaGATACATTTTCTGTTCCAT +
Preference number: 4 (lower is better)
Translates to: PWAPTSSTIHPRLTTHPSTSGKP*IHFLFH
Trigger: ATGGAACAGAAAATGTATCCAGGGTTTTCCAGATGT...GGAAGGGTGTGTGGTAAGTCTGGGGTGGATGGTAGAAGAGGTGGGGGCCCAGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGCGTTCTGCACCACGATaGTCACGTCGCACAAGAAGC +
Preference number: 4 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQRSAPR*SRRTRS
Trigger: GCTTCTTGTGCGACGTGATCATCGTGGTGCAGAACG...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp AGACCCAGCTCTCCTTTCTGTCCCGTTTGCAGCACTGGTTTTGTTTCCTTAATACGGAAGAGGGCGTTCTaGACCACGATGATCACGTCG +
Preference number: 4 (lower is better)
Translates to: RPSSPFCPVCSTGFVSLIRKRAF*TTMITS
Trigger: CGACGTGATCATCGTGGTGCAGAACGCCCTCTTCCG...TATTAAGGAAACAAAACCAGTGCTGCAAACGGGACAGAAAGGAGAGCTGGGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp GTTTGGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGCCTTGCCGCACGGAATaGACACGTACAGGTTGTCAC +
Preference number: 4 (lower is better)
Translates to: VWFEYRKWKRLWKSLCTRPCRTE*TRTGCH
Trigger: GTGACAACCTGTACGTGTGCATTCCGTGCGGCAAGG...CCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp AAGGAAGGGTTGGCCCTGGGGCTAGTGCCACTTGTGCAAAATGAGGAACTTCACCCTTTCTGTCCCGTTTaGAGCACTGGTTTTGTTTCC +
Preference number: 4 (lower is better)
Translates to: KEGLALGLVPLVQNEELHPFCPV*STGFVS
Trigger: GGAAACAAAACCAGTGCTGCAAACGGGACAGAAAGG...GTGAAGTTCCTCATTTTGCACAAGTGGCACTAGCCCCAGGGCCAACCCTTCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp ACGGATGACCGGAACCTGCGTGTGAAGGCGCTCACAAGGAATGTTCCTGTACGGCCATCTTTAGTTTTCTaGCTCTGGATGCGTAAAGCT +
Preference number: 4 (lower is better)
Translates to: TDDRNLRVKALTRNVPVRPSLVF*LWMRKA
Trigger: AGCTTTACGCATCCAGAGGCAGAAAACTAAAGATGG...CCGTACAGGAACATTCCTTGTGAGCGCCTTCACACGCAGGTTCCGGTCATCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GGTGGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGTGCTTTATTGCTGTTTaGTTCGAGTATAGAAAATGG +
Preference number: 4 (lower is better)
Translates to: GGRLFAFRLQNSPPLVTECFIAV*FEYRKW
Trigger: CCATTTTCTATACTCGAACCAAACAGCAATAAAGCA...CTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CCA 90 bp TCTCATGCCCACAGAGGAGCCAATCCGGCTACTGCGGGAGGTGGTGCTGTTGACTCCCGTTTGCAGCACTaGTTTTGTTTCCTTAATAAA +
Preference number: 4 (lower is better)
Translates to: SHAHRGANPATAGGGAVDSRLQH*FCFLNK
Trigger: TTTATTAAGGAAACAAAACCAGTGCTGCAAACGGGA...GTCAACAGCACCACCTCCCGCAGTAGCCGGATTGGCTCCTCTGTGGGCATGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGTAGGCACCGTCGCCTAACCTaGTTTCTAGCTTTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: GSSIENGSGSGRACVQGRHRRLT*FLALPS
Trigger: TGAGGGCAAAGCTAGAAACCAGGTTAGGCGACGGTG...CCTACCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GTTTGGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGGAAGAGAGTCCTGTATaGGAGGCCGGAGTCAAGGCA +
Preference number: 4 (lower is better)
Translates to: VWFEYRKWKRLWKSLCTREESPV*EAGVKA
Trigger: TGCCTTGACTCCGGCCTCCCATACAGGACTCTCTTC...CCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACCAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR CAA 72 bp ATACATGGATTACTGTTACTTAGCAGGGGCGACCGGTaGGCCAAAGCCTTGGTGTGCCCTTGGCACAATTCT +
Preference number: 4 (lower is better)
Translates to: IHGLLLLSRGDR*AKALVCPWHNS
Trigger: AGAATTGTGCCAAGGGCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGCTAAGTAACAGTAATCCATGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGTGTCATGGTCCAGGTTaGGCAGGTTGTCATGCACCA +
Preference number: 4 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQCHGPG*AGCHAP
Trigger: TGGTGCATGACAACCTGCTCAACCTGGACCATGACA...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR TCA 90 bp CTTCCCTGGGGTACAAGACGGAGAACTGGGATCATCATCTTAACTCTACTCTTCTACCTGACCTCTTGCTaGTCTGTTTCTGGGACTGGG +
Preference number: 4 (lower is better)
Translates to: LPWGTRRRTGIIILTLLFYLTSC*SVSGTG
Trigger: CCCAGTCCCAGAAACAGATCAGCAAGAGGTCAGGTA...GAAGAGTAGAGTTAAGATGATGATCCCAGTTCTCCGTCTTGTACCCCAGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp CTTCCCTGGGGTACAAGACGGAGAACTGGGATCATCATCTTAACTCTACTCTTCCCAAGAATGAGTTCCTaGAACCCAGGGCCAGAGACA +
Preference number: 4 (lower is better)
Translates to: LPWGTRRRTGIIILTLLFPRMSS*NPGPET
Trigger: TGTCTCTGGCCCTGGGTTTCAGGAACTCATTCTTGG...GAAGAGTAGAGTTAAGATGATGATCCCAGTTCTCCGTCTTGTACCCCAGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GAGCGGTGTTGTGATCTGGGGGCCAGCCATGTGGTAAAAAGGAGTAGAGGTCAATCAGAACCTCTGTCGTaGATGTGTTCAAGAGGCTTT +
Preference number: 4 (lower is better)
Translates to: ERCCDLGASHVVKRSRGQSEPLS*MCSRGF
Trigger: AAAGCCTCTTGAACACATTCACGACAGAGGTTCTGA...TTGACCTCTACTCCTTTTTACCACATGGCTGGCCCCCAGATCACAACACCGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp CTTCCCTGGGGTACAAGACGGAGAACTGGGATCATCATCTTAACTCTACTCTTCGGGATGTCACTTGTGTaGGTGCTTGTCCCTGGCTTA +
Preference number: 4 (lower is better)
Translates to: LPWGTRRRTGIIILTLLFGMSLV*VLVPGL
Trigger: TAAGCCAGGGACAAGCACTCACACAAGTGACATCCC...GAAGAGTAGAGTTAAGATGATGATCCCAGTTCTCCGTCTTGTACCCCAGGGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp TCGGGGTCCTTGGTTACTGCTTTATTGCTGTTTGGTTCGAGTATAGAAAATGGAGTGTCCAGCATCGTCTaGCCAGCACACTCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: SGSLVTALLLFGSSIENGVSSIV*PAHSPG
Trigger: CCCAGGAGAGTGTGCTGGGCAGACGATGCTGGACAC...TCCATTTTCTATACTCGAACCAAACAGCAATAAAGCAGTAACCAAGGACCCCGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
3UTR CAA 72 bp CTTCAGAACCTCTGTCGTGAATGTGTTCAAGAGGCTTaGGTTAAGTCAGGAAGAAGTGCCCAGGGTGTGTGT +
Preference number: 4 (lower is better)
Translates to: LQNLCRECVQEA*VKSGRSAQGVC
Trigger: ACACACACCCTGGGCACTTCTTCCTGACTTAACCAAAGCCTCTTGAACACATTCACGACAGAGGTTCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp TCGGGGTCCTTGGTTACTGCTTTATTGCTGTTTGGTTCGAGTATAGAAAATGGACGGGGAGATTCACAGTaGGAATGGGTGTGGTCGCAA +
Preference number: 4 (lower is better)
Translates to: SGSLVTALLLFGSSIENGRGDSQ*EWVWSQ
Trigger: TTGCGACCACACCCATTCTCACTGTGAATCTCCCCG...TCCATTTTCTATACTCGAACCAAACAGCAATAAAGCAGTAACCAAGGACCCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp GAGCGGTGTTGTGATCTGGGGGCCAGCCATGTGGTAAAAAGGAGTAGAGGTCAAGTTATGAAACATACCTaGCCTCTTGCTGATCTGTTT +
Preference number: 4 (lower is better)
Translates to: ERCCDLGASHVVKRSRGQVMKHT*PLADLF
Trigger: AAACAGATCAGCAAGAGGTCAGGTATGTTTCATAAC...TTGACCTCTACTCCTTTTTACCACATGGCTGGCCCCCAGATCACAACACCGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR GCA 90 bp TCGGGGTCCTTGGTTACTGCTTTATTGCTGTTTGGTTCGAGTATAGAAAATGGATCACACTTCGCCAGTTaGGTCCCCGTGGACAGTCAT +
Preference number: 4 (lower is better)
Translates to: SGSLVTALLLFGSSIENGSHFAS*VPVDSH
Trigger: ATGACTGTCCACGGGGACGCAACTGGCGAAGTGTGA...TCCATTTTCTATACTCGAACCAAACAGCAATAAAGCAGTAACCAAGGACCCCGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp CTTCCCTGGGGTACAAGACGGAGAACTGGGATCATCATCTTAACTCTACTCTTCAAAGCTTCAACCTGCTaGCTTTTAGAGGGAGAGGAC +
Preference number: 4 (lower is better)
Translates to: LPWGTRRRTGIIILTLLFKASTC*LLEGED
Trigger: GTCCTCTCCCTCTAAAAGCCAGCAGGTTGAAGCTTT...GAAGAGTAGAGTTAAGATGATGATCCCAGTTCTCCGTCTTGTACCCCAGGGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp GGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGTAGGTTAGTTTTCTGCCTCTaGATGCGTAAAGCTTCAACC +
Preference number: 4 (lower is better)
Translates to: GSSIENGSGSGRACVQGRLVFCL*MRKAST
Trigger: GGTTGAAGCTTTACGCATCCAGAGGCAGAAAACTAA...CCTACCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR TCA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGGCCACTTGTGCAAAATaGGGAACTTCACATTATCAG +
Preference number: 4 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQATCAK*GTSHYQ
Trigger: CTGATAATGTGAAGTTCCTCATTTTGCACAAGTGGC...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR GCA 90 bp TACTCTTCTGTCCTCTTAGAGACTTTCGCCTGTATACATGGATTACTGTTACTTGCCAAAGCCTTGGTGTaGCCTTGGCACAATTCTGCC +
Preference number: 4 (lower is better)
Translates to: YSSVLLETFACIHGLLLLAKALV*PWHNSA
Trigger: GGCAGAATTGTGCCAAGGGCACACCAAGGCTTTGGC...AAGTAACAGTAATCCATGTATACAGGCGAAAGTCTCTAAGAGGACAGAAGAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp TCGGGGTCCTTGGTTACTGCTTTATTGCTGTTTGGTTCGAGTATAGAAAATGGAGGTTTGGGCAGCTTTTaGGAACTAGGCAGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: SGSLVTALLLFGSSIENGGLGSF*ELGRRE
Trigger: CTCTCTTCTGCCTAGTTCCCAAAAGCTGCCCAAACC...TCCATTTTCTATACTCGAACCAAACAGCAATAAAGCAGTAACCAAGGACCCCGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp AGACCCAGCTCTCCTTTCTGTCCCGTTTGCAGCACTGGTTTTGTTTCCTTAATAGTGCCTAAAGAAACCTaGAAGGATACACAGGTCTTC +
Preference number: 4 (lower is better)
Translates to: RPSSPFCPVCSTGFVSLIVPKET*KDTQVF
Trigger: GAAGACCTGTGTATCCTTCCAGGTTTCTTTAGGCAC...TATTAAGGAAACAAAACCAGTGCTGCAAACGGGACAGAAAGGAGAGCTGGGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CCA 90 bp TACTCTTCTGTCCTCTTAGAGACTTTCGCCTGTATACATGGATTACTGTTACTTCGGGGTCGGGGTCCTTaGTTACTGCTTTATTGCTGT +
Preference number: 4 (lower is better)
Translates to: YSSVLLETFACIHGLLLLRGRGP*LLLYCC
Trigger: ACAGCAATAAAGCAGTAACCAAGGACCCCGACCCCG...AAGTAACAGTAATCCATGTATACAGGCGAAAGTCTCTAAGAGGACAGAAGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS TCA 90 bp CAGGCGGCGGCGGAGGCCCGACTGGGGACGGGTAGCAGGCCTGGATaGCCGGCGTGGCGGCCCGCAGGCCCCGGCCCGGCCGACCATAGG +
Preference number: 5 (lower is better)
Translates to: QAAAEARLGTGSRPG*PAWRPAGPGPADHR
Trigger: CCTATGGTCGGCCGGGCCGGGGCCTGCGGGCCGCCACGCCGGTCATCCAGGCCTGCTACCCGTCCCCAGTCGGGCCTCCGCCGCCGCCTG
80% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS GCA 90 bp AGTGCGGCGGCCGGGCCGGGTCCCGACGCGTACAGCTCGGCGCAGTaGGTGTTGACCGCGGCCTCTGGGCCCGAGGGCGGCTCCGCGGCA +
Preference number: 5 (lower is better)
Translates to: SAAAGPGPDAYSSAQ*VLTAASGPEGGSAA
Trigger: TGCCGCGGAGCCGCCCTCGGGCCCAGAGGCCGCGGTCAACACGCACTGCGCCGAGCTGTACGCGTCGGGACCCGGCCCGGCCGCCGCACT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS GCA 90 bp GGCCGCCAGGCGGGCTGGGGTCCTCGCTGCTACCGGTCTCCTCGCTaGTGCTCTTGTAGTCGTCGCCGTCGCCGCCCGCGCCGGGCCCGT +
Preference number: 5 (lower is better)
Translates to: GRQAGWGPRCYRSPR*CSCSRRRRRPRRAR
Trigger: ACGGGCCCGGCGCGGGCGGCGACGGCGACGACTACAAGAGCAGCAGCGAGGAGACCGGTAGCAGCGAGGACCCCAGCCCGCCTGGCGGCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS GCA 90 bp CGCCAGGCGGGCTGGGGTCCTCGCTGCTACCGGTCTCCTCGCTGCTaGTCTTGTAGTCGTCGCCGTCGCCGCCCGCGCCGGGCCCGTCCA +
Preference number: 5 (lower is better)
Translates to: RQAGWGPRCYRSPRC*SCSRRRRRPRRARP
Trigger: TGGACGGGCCCGGCGCGGGCGGCGACGGCGACGACTACAAGAGCAGCAGCGAGGAGACCGGTAGCAGCGAGGACCCCAGCCCGCCTGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS GCA 90 bp GCCCTAGGCCGGCGGCCCCAGCGGCCACTTCGGCCGCCTCGGCCCTaGCGTACAGCGCTTCCTCCTCCTCCACGTGAGCCTCCACGTGCG +
Preference number: 5 (lower is better)
Translates to: ALGRRPQRPLRPPRP*RTALPPPPREPPRA
Trigger: CGCACGTGGAGGCTCACGTGGAGGAGGAGGAAGCGCTGTACGGCAGGGCCGAGGCGGCCGAAGTGGCCGCTGGGGCCGCCGGCCTAGGGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS GCA 90 bp GCTTTCCGCACACTCTTATCTGGAGCGGCCCGGGCCGGCGGGCGCTaGTGCGGCTATGGCGCCACCTCGCGGGCGCGCAGGGCTCTGCGC +
Preference number: 5 (lower is better)
Translates to: AFRTLLSGAARAGGR*CGYGATSRARRALR
Trigger: GCGCAGAGCCCTGCGCGCCCGCGAGGTGGCGCCATAGCCGCAGCAGCGCCCGCCGGCCCGGGCCGCTCCAGATAAGAGTGTGCGGAAAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571875.2
ENST00000571990.1
ENST00000574370.1
CDS CCA 90 bp GGCCGCGCAGCAGCGACAGAGCGGGCTGGCGAGGGGCGCTCTAGGTaGGAGAGAAACGGTCGATGGTCCGGCCGTCGGGCCCGGCCGCCA +
Preference number: 5 (lower is better)
Translates to: GRAAATERAGEGRSR*ERNGRWSGRRARPP
Trigger: TGGCGGCCGGGCCCGACGGCCGGACCATCGACCGTTTCTCTCCCACCTAGAGCGCCCCTCGCCAGCCCGCTCTGTCGCTGCTGCGCGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACTCGGCGCAGTGCGTGTaGACCGCGGCCTCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHSAQCV*TAASGP
Trigger: GGGCCCAGAGGCCGCGGTCAACACGCACTGCGCCGA...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGAGCACCTCGGCCGCCTaGTCGGGGCTGAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: PGPQGREGRAPREWETWWSTSAA*SGLRPS
Trigger: GCTGGGCCTCAGCCCCGACAAGGCGGCCGAGGTGCT...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS TCA 90 bp GGAGAGAAACGGTCGATGGTCCGGCCGTCGGGCCCGGCCGCCAGGTaGGCGCCCTGGCTCAGCACCTCGGCCGCCTTGTCGGGGCTGAGG +
Preference number: 5 (lower is better)
Translates to: GEKRSMVRPSGPAAR*APWLSTSAALSGLR
Trigger: CCTCAGCCCCGACAAGGCGGCCGAGGTGCTGAGCCAGGGCGCTCACCTGGCGGCCGGGCCCGACGGCCGGACCATCGACCGTTTCTCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS GCA 90 bp GTCCAGGCCACAAAGAGGGGAGCAGCGGCGCTCCGAGGCACAGAGTaGGGCGGCCGGGCCGGGTCCCGACGCGTACAGCTCGGCGCAGTG +
Preference number: 5 (lower is better)
Translates to: VQATKRGAAALRGTE*GGRAGSRRVQLGAV
Trigger: CACTGCGCCGAGCTGTACGCGTCGGGACCCGGCCCGGCCGCCGCACTCTGTGCCTCGGAGCGCCGCTGCTCCCCTCTTTGTGGCCTGGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CCA 90 bp GGCGTTTCTTGCACAGCGCCACGAGGTCGGGGATCTGCAGGTAGCTaGCGGCGGCCAGCACGGCGCCCAGGCTCGGCTCAGCCCCCGGGG +
Preference number: 5 (lower is better)
Translates to: GVSCTAPRGRGSAGS*RRPARRPGSAQPPG
Trigger: CCCCGGGGGCTGAGCCGAGCCTGGGCGCCGTGCTGGCCGCCGCCAGCTACCTGCAGATCCCCGACCTCGTGGCGCTGTGCAAGAAACGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CCA 90 bp CCGCCGCCGCCGCCGCCGCCGCCCCGCAGGTGGCAGTACTTGCCGTaGCGCTTGAGGCGTTTCTTGCACAGCGCCACGAGGTCGGGGATC +
Preference number: 5 (lower is better)
Translates to: PPPPPPPPRRWQYLP*RLRRFLHSATRSGI
Trigger: GATCCCCGACCTCGTGGCGCTGTGCAAGAAACGCCTCAAGCGCCACGGCAAGTACTGCCACCTGCGGGGCGGCGGCGGCGGCGGCGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CCA 90 bp CAGCCAGCGGCCGCTCTGGCGCCGCGGAGCCCGGCGGGCTCTTCTTaGACAGGTCCAGGCCACAAAGAGGGGAGCAGCGGCGCTCCGAGG +
Preference number: 5 (lower is better)
Translates to: QPAAALAPRSPAGSS*TGPGHKEGSSGAPR
Trigger: CCTCGGAGCGCCGCTGCTCCCCTCTTTGTGGCCTGGACCTGTCCAAGAAGAGCCCGCCGGGCTCCGCGGCGCCAGAGCGGCCGCTGGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CCA 90 bp GAGCGGGCTGGCGAGGGGCGCTCTAGGTGGGAGAGAAACGGTCGATaGTCCGGCCGTCGGGCCCGGCCGCCAGGTGAGCGCCCTGGCTCA +
Preference number: 5 (lower is better)
Translates to: ERAGEGRSRWERNGR*SGRRARPPGERPGS
Trigger: TGAGCCAGGGCGCTCACCTGGCGGCCGGGCCCGACGGCCGGACCATCGACCGTTTCTCTCCCACCTAGAGCGCCCCTCGCCAGCCCGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CCA 90 bp CCTGGTCGCGTCTCAGCCCCGCCGCGCTTTCCGCACACTCTTATCTaGAGCGGCCCGGGCCGGCGGGCGCTGCTGCGGCTATGGCGCCAC +
Preference number: 5 (lower is better)
Translates to: PGRVSAPPRFPHTLI*SGPGRRALLRLWRH
Trigger: GTGGCGCCATAGCCGCAGCAGCGCCCGCCGGCCCGGGCCGCTCCAGATAAGAGTGTGCGGAAAGCGCGGCGGGGCTGAGACGCGACCAGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571875.2
ENST00000571990.1
ENST00000574370.1
CDS-3UTR CAA 90 bp CCGGGGCCGCAGGGAAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGGCCGCCAGCACGTTCTaGTGCGCGCGGAAGAGGGCG +
Preference number: 5 (lower is better)
Translates to: PGPQGREGRAPREWETWWAASTF*CARKRA
Trigger: CGCCCTCTTCCGCGCGCACAAGAACGTGCTGGCGGC...CCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTTCCCTGCGGCCCCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp AGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCGGAGCCCCGGCGACCTaGTCCCCGCCGCCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: SRHCGDAAVVPGTVGPARGAPAT*SPPPPK
Trigger: TTTTGGAGGCGGCGGGGACAAGGTCGCCGGGGCTCC...GCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp AGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCTCGGGGAAGTCGAGCTaGCCCTTGCCGTCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: SRHCGDAAVVPGTVGPARSGKSS*PLPSGP
Trigger: CGGCCCCGACGGCAAGGGCAAGCTCGACTTCCCCGA...GCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCCTCTCCAGCGCCACCTaGGGGTCGTGCAGGAAGTGC +
Preference number: 5 (lower is better)
Translates to: TVATLRLSRAQWALRAAPLSSAT*GSCRKC
Trigger: GCACTTCCTGCACGACCCCAAGGTGGCGCTGGAGAG...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
73% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCAGCAGGGGCGACCGGTaGGCCAAAGCCTTGGTGTGC +
Preference number: 5 (lower is better)
Translates to: TVATLRLSRAQWALRAAPSRGDR*AKALVC
Trigger: GCACACCAAGGCTTTGGCCAACCGGTCGCCCCTGCT...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS GCA 90 bp GGGCGCCTCCATCGTGTCCAGCATCGTCTGCCCAGCACACTCTCCTaGGGGGACACACACCGGCCGGGTGAGAGCCGTGCGGCGCCCTGG +
Preference number: 5 (lower is better)
Translates to: GRLHRVQHRLPSTLS*GDTHRPGESRAAPW
Trigger: CCAGGGCGCCGCACGGCTCTCACCCGGCCGGTGTGTGTCCCCGCAGGAGAGTGTGCTGGGCAGACGATGCTGGACACGATGGAGGCGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576444.1
CDS CCA 90 bp CACTTCCCCTTCCCTCAGCTGAGCGGGGGCATCAGCCCTGCGGCCTaGGCACCGGCGAAGGACCGGCTGCCCTCTGGAGTGGGAGCCCAG +
Preference number: 5 (lower is better)
Translates to: HFPFPQLSGGISPAA*APAKDRLPSGVGAQ
Trigger: CTGGGCTCCCACTCCAGAGGGCAGCCGGTCCTTCGCCGGTGCCCAGGCCGCAGGGCTGATGCCCCCGCTCAGCTGAGGGAAGGGGAAGTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000576444.1
CDS-3UTR CAA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACCGCAGGTGGCAGTACTaGCCGTGGCGCTTGAGGCGT +
Preference number: 5 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHRRWQY*PWRLRR
Trigger: ACGCCTCAAGCGCCACGGCAAGTACTGCCACCTGCG...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS TCA 90 bp CGCCGCCGCCGCCGCCCCGCAGGTGGCAGTACTTGCCGTGGCGCTTaGGGCGTTTCTTGCACAGCGCCACGAGGTCGGGGATCTGCAGGT +
Preference number: 5 (lower is better)
Translates to: RRRRRPAGGSTCRGA*GVSCTAPRGRGSAG
Trigger: ACCTGCAGATCCCCGACCTCGTGGCGCTGTGCAAGAAACGCCTCAAGCGCCACGGCAAGTACTGCCACCTGCGGGGCGGCGGCGGCGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CCA 90 bp GTTGTCACCGAAGCTCTCGGGCTCGCCATAGGCCAGGTGCGGGCATaGGTAGCCCTCGAGGTGGCCGCCAGGCGGGCTGGGGTCCTCGCT +
Preference number: 5 (lower is better)
Translates to: VVTEALGLAIGQVRA*VALEVAARRAGVLA
Trigger: AGCGAGGACCCCAGCCCGCCTGGCGGCCACCTCGAGGGCTACCCATGCCCGCACCTGGCCTATGGCGAGCCCGAGAGCTTCGGTGACAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS TCA 90 bp CGGCCGCAGCCGCCTCTGCGCCGTCAGCCAGGCGGCCGGTGTAGATaGAGTCCAGCACCAGGCGGAACACGGCCGGGCTCACCATGTCAT +
Preference number: 5 (lower is better)
Translates to: RPQPPLRRQPGGRCR*SPAPGGTRPGSPCH
Trigger: ATGACATGGTGAGCCCGGCCGTGTTCCGCCTGGTGCTGGACTTCATCTACACCGGCCGCCTGGCTGACGGCGCAGAGGCGGCTGCGGCCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000571990.1
ENST00000619757.5
CDS GCA 90 bp ATGGGTAGCCCTCGAGGTGGCCGCCAGGCGGGCTGGGGTCCTCGCTaGTACCGGTCTCCTCGCTGCTGCTCTTGTAGTCGTCGCCGTCGC +
Preference number: 5 (lower is better)
Translates to: MGSPRGGRQAGWGPR*YRSPRCCSCSRRRR
Trigger: GCGACGGCGACGACTACAAGAGCAGCAGCGAGGAGACCGGTAGCAGCGAGGACCCCAGCCCGCCTGGCGGCCACCTCGAGGGCTACCCAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS GCA 90 bp AGCAGCTCGGCCGCGGCCGCCTTGTCCTGCTGCTTCAGGCTCAGCTaGTCGGCCGTGAGGCGAGCCACAGCAAAGACGCCCTCGGGGAAG +
Preference number: 5 (lower is better)
Translates to: SSSAAAALSCCFRLS*SAVRRATAKTPSGK
Trigger: CTTCCCCGAGGGCGTCTTTGCTGTGGCTCGCCTCACGGCCGAGCAGCTGAGCCTGAAGCAGCAGGACAAGGCGGCCGCGGCCGAGCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CCA 90 bp CCAGGTGCGGGCATGGGTAGCCCTCGAGGTGGCCGCCAGGCGGGCTaGGGTCCTCGCTGCTACCGGTCTCCTCGCTGCTGCTCTTGTAGT +
Preference number: 5 (lower is better)
Translates to: PGAGMGSPRGGRQAG*GPRCYRSPRCCSCS
Trigger: ACTACAAGAGCAGCAGCGAGGAGACCGGTAGCAGCGAGGACCCCAGCCCGCCTGGCGGCCACCTCGAGGGCTACCCATGCCCGCACCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCTCCAGGTTGAGCAGGTaGTCATGCACCACCAGGGAC +
Preference number: 5 (lower is better)
Translates to: TVATLRLSRAQWALRAAPSRLSR*SCTTRD
Trigger: GTCCCTGGTGGTGCATGACAACCTGCTCAACCTGGA...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCTACTTGCCGTGGCGCTaGAGGCGTTTCTTGCACAGC +
Preference number: 5 (lower is better)
Translates to: TVATLRLSRAQWALRAAPYLPWR*RRFLHS
Trigger: GCTGTGCAAGAAACGCCTCAAGCGCCACGGCAAGTA...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp AGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGTCGGCGCAGTGCGTGTaGACCGCGGCCTCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: RRELKRPRSSPAQPGLGMSAQCV*TAASGP
Trigger: GGGCCCAGAGGCCGCGGTCAACACGCACTGCGCCGA...CATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp ACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCCGCCCCCATGCACACGTACAGGTaGTCACCGAAGCTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: TVATLRLSRAQWALRAAPMHTYR*SPKLSG
Trigger: GCCCGAGAGCTTCGGTGACAACCTGTACGTGTGCAT...GGGGGCGGCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp AAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTAGGCTCTTCGCCTGTGGCGACGCTGCGGTaGTCCCGGGCACAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: KGREGTAGVGDLVVGSSPVATLR*SRAQWA
Trigger: GGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCAC...AGGCGAAGAGCCTACCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACCAGAACTCCCCGCCCTaGGTGACTGAGGAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHQNSPP*VTEEGR
Trigger: CCTTCCTTCCTCAGTCACCAAGGGCGGGGAGTTCTG...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS GCA 90 bp AGCTGCCTGGAGTGGCCGGGCGCCTCCATCGTGTCCAGCATCGTCTaGCCAGCACACTCTCCTGCGGGGACACACACCGGCCGGGTGAGA +
Preference number: 5 (lower is better)
Translates to: SCLEWPGASIVSSIV*PAHSPAGTHTGRVR
Trigger: TCTCACCCGGCCGGTGTGTGTCCCCGCAGGAGAGTGTGCTGGGCAGACGATGCTGGACACGATGGAGGCGCCCGGCCACTCCAGGCAGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576444.1
CDS-3UTR CAA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACTCGCACAAGAAGCCCTaGGTGCGCTGGTTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHSHKKP*VRWLLS
Trigger: GCTCAACAACCAGCGCACCAAGGGCTTCTTGTGCGA...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp AGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACAGTGGGCCCTGCGCGCTCCAGGTTGAGCAGGTaGTCATGCACCACCAGGGAC +
Preference number: 5 (lower is better)
Translates to: SRHCGDAAVVPGTVGPARSRLSR*SCTTRD
Trigger: GTCCCTGGTGGTGCATGACAACCTGCTCAACCTGGA...GCGCGCAGGGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp GAGCCCCTCCCAAGGATCGGGCGGAAGCTGCTGGGACCCTCCTGGGCTGCCAGGCGCTTGAGGCGTTTCTaGCACAGCGCCACGAGGTCG +
Preference number: 5 (lower is better)
Translates to: EPLPRIGRKLLGPSWAARRLRRF*HSATRS
Trigger: CGACCTCGTGGCGCTGTGCAAGAAACGCCTCAAGCG...CCTGGCAGCCCAGGAGGGTCCCAGCAGCTTCCGCCCGATCCTTGGGAGGGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACTACTTGCCGTGGCGCTaGAGGCGTTTCTTGCACAGC +
Preference number: 5 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHYLPWR*RRFLHS
Trigger: GCTGTGCAAGAAACGCCTCAAGCGCCACGGCAAGTA...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp GAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATAAGTCGAGCTTGCCCTaGCCGTCGGGGCCGGGGACG +
Preference number: 5 (lower is better)
Translates to: EEGAKETAFQPSPAWARDKSSLP*PSGPGT
Trigger: CGTCCCCGGCCCCGACGGCAAGGGCAAGCTCGACTT...ATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp GTGAGGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGCAGAACTCCCCGCCCTaGGTGACTGAGGAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: VRPPRGGAATVATLRLSRQNSPP*VTEEGR
Trigger: CCTTCCTTCCTCAGTCACCAAGGGCGGGGAGTTCTG...CCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTCAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp GTGAGGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGTCGCACAAGAAGCCCTaGGTGCGCTGGTTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: VRPPRGGAATVATLRLSRSHKKP*VRWLLS
Trigger: GCTCAACAACCAGCGCACCAAGGGCTTCTTGTGCGA...CCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp AAGATTCTCTCCCCAGCTGGAAGGCCGATGACTGGGTGGTCGGGAGGGAGACCCTCGGCGCAGTGCGTGTaGACCGCGGCCTCTGGGCCC +
Preference number: 5 (lower is better)
Translates to: KILSPAGRPMTGWSGGRPSAQCV*TAASGP
Trigger: GGGCCCAGAGGCCGCGGTCAACACGCACTGCGCCGA...GGGTCTCCCTCCCGACCACCCAGTCATCGGCCTTCCAGCTGGGGAGAGAATCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp GAGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATCGCAGGTGGCAGTACTaGCCGTGGCGCTTGAGGCGT +
Preference number: 5 (lower is better)
Translates to: EEGAKETAFQPSPAWARDRRWQY*PWRLRR
Trigger: ACGCCTCAAGCGCCACGGCAAGTACTGCCACCTGCG...ATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp GTTCCTGAAAGGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGGAGCCCCGGCGACCTaGTCCCCGCCGCCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: VPERPPGAQCSTEDAHVPGAPAT*SPPPPK
Trigger: TTTTGGAGGCGGCGGGGACAAGGTCGCCGGGGCTCC...AGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGGCCTTTCAGGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp CCCTGGGCCCCCACCTCTTCTACCATCCACCCCAGACTTACCACACACCCTTCCAAGTCGAGCTTGCCCTaGCCGTCGGGGCCGGGGACG +
Preference number: 5 (lower is better)
Translates to: PWAPTSSTIHPRLTTHPSKSSLP*PSGPGT
Trigger: CGTCCCCGGCCCCGACGGCAAGGGCAAGCTCGACTT...GGAAGGGTGTGTGGTAAGTCTGGGGTGGATGGTAGAAGAGGTGGGGGCCCAGGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp GGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGAAAGCACCTCGGCCGCCTaGTCGGGGCTGAGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: GRLFAFRLQNSPPLVTEESTSAA*SGLRPS
Trigger: GCTGGGCCTCAGCCCCGACAAGGCGGCCGAGGTGCT...TTCCTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp GTGAGGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGATGTCATGGTCCAGGTaGAGCAGGTTGTCATGCACC +
Preference number: 5 (lower is better)
Translates to: VRPPRGGAATVATLRLSRMSWSR*SRLSCT
Trigger: GGTGCATGACAACCTGCTCAACCTGGACCATGACAT...CCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCCTCAC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp CTGTCCTCAGTGACAGCCTTCTGCTCTCTCATGCCCACAGAGGAGCCAATCCGGGTGGCGACGCTGCGGTaGTCCCGGGCACAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: LSSVTAFCSLMPTEEPIRVATLR*SRAQWA
Trigger: GGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCAC...CCGGATTGGCTCCTCTGTGGGCATGAGAGAGCAGAAGGCTGTCACTGAGGACAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp GGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTGAGCCACCAAAGCCCATCCAGGTCCTaGTGCAGGGGCAGAAGAGAG +
Preference number: 5 (lower is better)
Translates to: GHQAPSVARKMPTCLSHQSPSRS*CRGRRE
Trigger: CTCTCTTCTGCCCCTGCACAAGGACCTGGATGGGCT...TTGGTGGCTCAGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp GCTGGCTACAGCAACAGCAGCTGGGCAAGCCAGATAGGCCGCCCATGCTCTCAGCGGGAGGTGGTGCTGTaGACGGATGACCGGAACCTG +
Preference number: 5 (lower is better)
Translates to: AGYSNSSWASQIGRPCSQREVVL*TDDRNL
Trigger: CAGGTTCCGGTCATCCGTCAACAGCACCACCTCCCG...CTGAGAGCATGGGCGGCCTATCTGGCTTGCCCAGCTGCTGTTGCTGTAGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp AAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTAGGCTCTTCGCCTGGGAGGCTGACGGGTTaGGGCAGCTTTTGGGAACTA +
Preference number: 5 (lower is better)
Translates to: KGREGTAGVGDLVVGSSPGRLTG*GSFWEL
Trigger: TAGTTCCCAAAAGCTGCCCAAACCCGTCAGCCTCCC...AGGCGAAGAGCCTACCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS TCA 90 bp GCCCTCCGGGAACCTGGGCAGAGGTGTTACCCACACAGCCCGCCCTaGACTTTCGGGTCTCCTAAAGGAACCCACGACGAGTCATCAGGG +
Preference number: 5 (lower is better)
Translates to: ALREPGQRCYPHSPP*TFGSPKGTHDESSG
Trigger: CCCTGATGACTCGTCGTGGGTTCCTTTAGGAGACCCGAAAGTTCAGGGCGGGCTGTGTGGGTAACACCTCTGCCCAGGTTCCCGGAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574370.1
CDS-3UTR CAA 90 bp CTGTCCTCAGTGACAGCCTTCTGCTCTCTCATGCCCACAGAGGAGCCAATCCGGCTCTCCAGCGCCACCTaGGGGTCGTGCAGGAAGTGC +
Preference number: 5 (lower is better)
Translates to: LSSVTAFCSLMPTEEPIRLSSAT*GSCRKC
Trigger: GCACTTCCTGCACGACCCCAAGGTGGCGCTGGAGAG...CCGGATTGGCTCCTCTGTGGGCATGAGAGAGCAGAAGGCTGTCACTGAGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp GCTGGCTACAGCAACAGCAGCTGGGCAAGCCAGATAGGCCGCCCATGCTCTCAGCTCACACTTCGCCAGTaGCGTCCCCGTGGACAGTCA +
Preference number: 5 (lower is better)
Translates to: AGYSNSSWASQIGRPCSQLTLRQ*RPRGQS
Trigger: TGACTGTCCACGGGGACGCAACTGGCGAAGTGTGAG...CTGAGAGCATGGGCGGCCTATCTGGCTTGCCCAGCTGCTGTTGCTGTAGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp AAGGGAAGGGAGGGCACCGCGGGAGTGGGAGACCTGGTGGTAGGCTCTTCGCCTATGTCATGGTCCAGGTaGAGCAGGTTGTCATGCACC +
Preference number: 5 (lower is better)
Translates to: KGREGTAGVGDLVVGSSPMSWSR*SRLSCT
Trigger: GGTGCATGACAACCTGCTCAACCTGGACCATGACAT...AGGCGAAGAGCCTACCACCAGGTCTCCCACTCCCGCGGTGCCCTCCCTTCCCTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp GGTGGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGATGCACACGTACAGGTaGTCACCGAAGCTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: GGRLFAFRLQNSPPLVTEMHTYR*SPKLSG
Trigger: GCCCGAGAGCTTCGGTGACAACCTGTACGTGTGCAT...CTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp GAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGGGCCTGGGGTCTCCTTaGGTCAAAGCTGATATCAAA +
Preference number: 5 (lower is better)
Translates to: EGAKETAFQPSPAWARDGGLGSP*VKADIK
Trigger: TTTGATATCAGCTTTGACCAAAGGAGACCCCAGGCC...CCCATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp GGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGTAGGGTGGCGACGCTGCGGTaGTCCCGGGCACAGTGGGCC +
Preference number: 5 (lower is better)
Translates to: GSSIENGSGSGRACVQGRVATLR*SRAQWA
Trigger: GGCCCACTGTGCCCGGGACAACCGCAGCGTCGCCAC...CCTACCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp AGGAGGGAGCTAAAGAGACCGCGTTCCAGCCCAGCCCAGCCTGGGCTCGGGATGGGCCTGGGGTCTCCTTaGGTCAAAGCTGATATCAAA +
Preference number: 5 (lower is better)
Translates to: RRELKRPRSSPAQPGLGMGLGSP*VKADIK
Trigger: TTTGATATCAGCTTTGACCAAAGGAGACCCCAGGCC...CATCCCGAGCCCAGGCTGGGCTGGGCTGGAACGCGGTCTCTTTAGCTCCCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp GGCCGCCGAGAGGTGGAGCCGCCACTGTGGCGACGCTGCGGTTGTCCCGGGCACTTGGTTACTGCTTTATaGCTGTTTGGTTCGAGTATA +
Preference number: 5 (lower is better)
Translates to: GRREVEPPLWRRCGCPGHLVTAL*LFGSSI
Trigger: TATACTCGAACCAAACAGCAATAAAGCAGTAACCAA...GTGCCCGGGACAACCGCAGCGTCGCCACAGTGGCGGCTCCACCTCTCGGCGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CCA 90 bp CCACTTGGACGCACTCCCCAACACACCCACCCTCACTCAGGCGCATaGATTCGGTGTGCGCGGCATAAACTGATTTGTCCCCAGCCCTAT +
Preference number: 5 (lower is better)
Translates to: PLGRTPQHTHPHSGA*IRCARHKLICPQPY
Trigger: ATAGGGCTGGGGACAAATCAGTTTATGCCGCGCACACCGAATCCATGCGCCTGAGTGAGGGTGGGTGTGTTGGGGAGTGCGTCCAAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574370.1
CDS-3UTR CAA 90 bp GGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGTAGGGGAGCCCCGGCGACCTaGTCCCCGCCGCCTCCAAAA +
Preference number: 5 (lower is better)
Translates to: GSSIENGSGSGRACVQGRGAPAT*SPPPPK
Trigger: TTTTGGAGGCGGCGGGGACAAGGTCGCCGGGGCTCC...CCTACCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp GGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGTAGGAAGTCGAGCTTGCCCTaGCCGTCGGGGCCGGGGACG +
Preference number: 5 (lower is better)
Translates to: GSSIENGSGSGRACVQGRKSSLP*PSGPGT
Trigger: CGTCCCCGGCCCCGACGGCAAGGGCAAGCTCGACTT...CCTACCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS TCA 90 bp CCCACCCTCACTCAGGCGCATGGATTCGGTGTGCGCGGCATAAACTaGTTTGTCCCCAGCCCTATCCAGGCACTGATACTAACAGGCGCT +
Preference number: 5 (lower is better)
Translates to: PTLTQAHGFGVRGIN*FVPSPIQALILTGA
Trigger: AGCGCCTGTTAGTATCAGTGCCTGGATAGGGCTGGGGACAAATCAGTTTATGCCGCGCACACCGAATCCATGCGCCTGAGTGAGGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574370.1
CDS CCA 90 bp TCTCCTGGAACTCCCCGTAGACATTACTGTACGGCACTGTCCACTTaGACGCACTCCCCAACACACCCACCCTCACTCAGGCGCATGGAT +
Preference number: 5 (lower is better)
Translates to: SPGTPRRHYCTALST*THSPTHPPSLRRMD
Trigger: ATCCATGCGCCTGAGTGAGGGTGGGTGTGTTGGGGAGTGCGTCCAAGTGGACAGTGCCGTACAGTAATGTCTACGGGGAGTTCCAGGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574370.1
CDS-3UTR CAA 90 bp GGTAGGCTCTTCGCCTTCCGACTCCAGAACTCCCCGCCCTTGGTGACTGAGGAAATGTCATGGTCCAGGTaGAGCAGGTTGTCATGCACC +
Preference number: 5 (lower is better)
Translates to: GRLFAFRLQNSPPLVTEEMSWSR*SRLSCT
Trigger: GGTGCATGACAACCTGCTCAACCTGGACCATGACAT...TTCCTCAGTCACCAAGGGCGGGGAGTTCTGGAGTCGGAAGGCGAAGAGCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp AAGGAAGGGTTGGCCCTGGGGCTAGTGCCACTTGTGCAAAATGAGGAACTTCACCGCTTGAGGCGTTTCTaGCACAGCGCCACGAGGTCG +
Preference number: 5 (lower is better)
Translates to: KEGLALGLVPLVQNEELHRLRRF*HSATRS
Trigger: CGACCTCGTGGCGCTGTGCAAGAAACGCCTCAAGCG...GTGAAGTTCCTCATTTTGCACAAGTGGCACTAGCCCCAGGGCCAACCCTTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGTCGGGGAAGTCGAGCTaGCCCTTGCCGTCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQSGKSS*PLPSGP
Trigger: CGGCCCCGACGGCAAGGGCAAGCTCGACTTCCCCGA...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp AGACCCAGCTCTCCTTTCTGTCCCGTTTGCAGCACTGGTTTTGTTTCCTTAATAGCCGCCAGCACGTTCTaGTGCGCGCGGAAGAGGGCG +
Preference number: 5 (lower is better)
Translates to: RPSSPFCPVCSTGFVSLIAASTF*CARKRA
Trigger: CGCCCTCTTCCGCGCGCACAAGAACGTGCTGGCGGC...TATTAAGGAAACAAAACCAGTGCTGCAAACGGGACAGAAAGGAGAGCTGGGTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp AAGGAAGGGTTGGCCCTGGGGCTAGTGCCACTTGTGCAAAATGAGGAACTTCACTCCAGGTTGAGCAGGTaGTCATGCACCACCAGGGAC +
Preference number: 5 (lower is better)
Translates to: KEGLALGLVPLVQNEELHSRLSR*SCTTRD
Trigger: GTCCCTGGTGGTGCATGACAACCTGCTCAACCTGGA...GTGAAGTTCCTCATTTTGCACAAGTGGCACTAGCCCCAGGGCCAACCCTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp GGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGTAGGCGCTTGAGGCGTTTCTaGCACAGCGCCACGAGGTCG +
Preference number: 5 (lower is better)
Translates to: GSSIENGSGSGRACVQGRRLRRF*HSATRS
Trigger: CGACCTCGTGGCGCTGTGCAAGAAACGCCTCAAGCG...CCTACCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp GTTTGGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGCGCAGGTGGCAGTACTaGCCGTGGCGCTTGAGGCGT +
Preference number: 5 (lower is better)
Translates to: VWFEYRKWKRLWKSLCTRRRWQY*PWRLRR
Trigger: ACGCCTCAAGCGCCACGGCAAGTACTGCCACCTGCG...CCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACCAAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp AAGGAAGGGTTGGCCCTGGGGCTAGTGCCACTTGTGCAAAATGAGGAACTTCACGCGGGGTCGGGGTCCTaGGTTACTGCTTTATTGCTG +
Preference number: 5 (lower is better)
Translates to: KEGLALGLVPLVQNEELHAGSGS*VTALLL
Trigger: CAGCAATAAAGCAGTAACCAAGGACCCCGACCCCGC...GTGAAGTTCCTCATTTTGCACAAGTGGCACTAGCCCCAGGGCCAACCCTTCCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp GGTTCGAGTATAGAAAATGGAAGCGGCTCTGGAAGAGCCTGTGTACAAGGTAGGCAGAACTCCCCGCCCTaGGTGACTGAGGAAGGAAGG +
Preference number: 5 (lower is better)
Translates to: GSSIENGSGSGRACVQGRQNSPP*VTEEGR
Trigger: CCTTCCTTCCTCAGTCACCAAGGGCGGGGAGTTCTG...CCTACCTTGTACACAGGCTCTTCCAGAGCCGCTTCCATTTTCTATACTCGAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp CAAGGTAGGAAATATACAAACGAAGAGGAGGGAGCTAAAGAGACCGCGTTCCAGTACTTGCCGTGGCGCTaGAGGCGTTTCTTGCACAGC +
Preference number: 5 (lower is better)
Translates to: QGRKYTNEEEGAKETAFQYLPWR*RRFLHS
Trigger: GCTGTGCAAGAAACGCCTCAAGCGCCACGGCAAGTA...CTGGAACGCGGTCTCTTTAGCTCCCTCCTCTTCGTTTGTATATTTCCTACCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp TACTCTTCTGTCCTCTTAGAGACTTTCGCCTGTATACATGGATTACTGTTACTTTCGGGGAAGTCGAGCTaGCCCTTGCCGTCGGGGCCG +
Preference number: 5 (lower is better)
Translates to: YSSVLLETFACIHGLLLLSGKSS*PLPSGP
Trigger: CGGCCCCGACGGCAAGGGCAAGCTCGACTTCCCCGA...AAGTAACAGTAATCCATGTATACAGGCGAAAGTCTCTAAGAGGACAGAAGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp GTTCCTGAAAGGCCACCAGGCGCCCAGTGTAGCACGGAAGATGCCCACGTGCCTTTGGTTACTGCTTTATaGCTGTTTGGTTCGAGTATA +
Preference number: 5 (lower is better)
Translates to: VPERPPGAQCSTEDAHVPLVTAL*LFGSSI
Trigger: TATACTCGAACCAAACAGCAATAAAGCAGTAACCAA...AGGCACGTGGGCATCTTCCGTGCTACACTGGGCGCCTGGTGGCCTTTCAGGAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp CTTCCCTGGGGTACAAGACGGAGAACTGGGATCATCATCTTAACTCTACTCTTCCGGTTGGCCAAAGCCTaGGTGTGCCCTTGGCACAAT +
Preference number: 5 (lower is better)
Translates to: LPWGTRRRTGIIILTLLFRLAKA*VCPWHN
Trigger: ATTGTGCCAAGGGCACACCAAGGCTTTGGCCAACCG...GAAGAGTAGAGTTAAGATGATGATCCCAGTTCTCCGTCTTGTACCCCAGGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp AGACCCAGCTCTCCTTTCTGTCCCGTTTGCAGCACTGGTTTTGTTTCCTTAATATGGGACGCTCCTGGTTaGAGGCCCAGGGCAGGAATA +
Preference number: 5 (lower is better)
Translates to: RPSSPFCPVCSTGFVSLIWDAPG*RPRAGI
Trigger: TATTCCTGCCCTGGGCCTCAAACCAGGAGCGTCCCA...TATTAAGGAAACAAAACCAGTGCTGCAAACGGGACAGAAAGGAGAGCTGGGTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp TCGGGGTCCTTGGTTACTGCTTTATTGCTGTTTGGTTCGAGTATAGAAAATGGATCGCACAAGAAGCCCTaGGTGCGCTGGTTGTTGAGC +
Preference number: 5 (lower is better)
Translates to: SGSLVTALLLFGSSIENGSHKKP*VRWLLS
Trigger: GCTCAACAACCAGCGCACCAAGGGCTTCTTGTGCGA...TCCATTTTCTATACTCGAACCAAACAGCAATAAAGCAGTAACCAAGGACCCCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp TACTCTTCTGTCCTCTTAGAGACTTTCGCCTGTATACATGGATTACTGTTACTTATGCACACGTACAGGTaGTCACCGAAGCTCTCGGGC +
Preference number: 5 (lower is better)
Translates to: YSSVLLETFACIHGLLLLMHTYR*SPKLSG
Trigger: GCCCGAGAGCTTCGGTGACAACCTGTACGTGTGCAT...AAGTAACAGTAATCCATGTATACAGGCGAAAGTCTCTAAGAGGACAGAAGAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp AAGGAAGGGTTGGCCCTGGGGCTAGTGCCACTTGTGCAAAATGAGGAACTTCACTTGGTTACTGCTTTATaGCTGTTTGGTTCGAGTATA +
Preference number: 5 (lower is better)
Translates to: KEGLALGLVPLVQNEELHLVTAL*LFGSSI
Trigger: TATACTCGAACCAAACAGCAATAAAGCAGTAACCAA...GTGAAGTTCCTCATTTTGCACAAGTGGCACTAGCCCCAGGGCCAACCCTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS-3UTR CAA 90 bp AGACCCAGCTCTCCTTTCTGTCCCGTTTGCAGCACTGGTTTTGTTTCCTTAATAAACATACCTGACCTCTaGCTGATCTGTTTCTGGGAC +
Preference number: 5 (lower is better)
Translates to: RPSSPFCPVCSTGFVSLINIPDL*LICFWD
Trigger: GTCCCAGAAACAGATCAGCAAGAGGTCAGGTATGTT...TATTAAGGAAACAAAACCAGTGCTGCAAACGGGACAGAAAGGAGAGCTGGGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp AGACCCAGCTCTCCTTTCTGTCCCGTTTGCAGCACTGGTTTTGTTTCCTTAATATGTGTTCAAGAGGCTTaGGTTAAGTCAGGAAGAAGT +
Preference number: 5 (lower is better)
Translates to: RPSSPFCPVCSTGFVSLICVQEA*VKSGRS
Trigger: ACTTCTTCCTGACTTAACCAAAGCCTCTTGAACACA...TATTAAGGAAACAAAACCAGTGCTGCAAACGGGACAGAAAGGAGAGCTGGGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS-3UTR CAA 90 bp TACTCTTCTGTCCTCTTAGAGACTTTCGCCTGTATACATGGATTACTGTTACTTTCCTTTCTGTCCCGTTaGCAGCACTGGTTTTGTTTC +
Preference number: 5 (lower is better)
Translates to: YSSVLLETFACIHGLLLLSFLSR*QHWFCF
Trigger: GAAACAAAACCAGTGCTGCAAACGGGACAGAAAGGA...AAGTAACAGTAATCCATGTATACAGGCGAAAGTCTCTAAGAGGACAGAAGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000619757.5
CDS GCA 72 bp GCCGGGCCGGGTCCCGACGCGTACAGCTCGGCGCAGTaGGTGTTGACCGCGGCCTCTGGGCCCGAGGGCGGC +
Preference number: 6 (lower is better)
Translates to: AGPGPDAYSSAQ*VLTAASGPEGG
Trigger: GCCGCCCTCGGGCCCAGAGGCCGCGGTCAACACGCACTGCGCCGAGCTGTACGCGTCGGGACCCGGCCCGGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CCA 72 bp TGCGGCCTGGGCACCGGCGAAGGACCGGCTGCCCTCTaGAGTGGGAGCCCAGGCCGGCCCGCCCGGACCAGG +
Preference number: 6 (lower is better)
Translates to: CGLGTGEGPAAL*SGSPGRPARTR
Trigger: CCTGGTCCGGGCGGGCCGGCCTGGGCTCCCACTCCAGAGGGCAGCCGGTCCTTCGCCGGTGCCCAGGCCGCA
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000576444.1
CDS TCA 72 bp CGGGTCCCGACGCGTACAGCTCGGCGCAGTGCGTGTTaGCCGCGGCCTCTGGGCCCGAGGGCGGCTCCGCGG +
Preference number: 6 (lower is better)
Translates to: RVPTRTARRSAC*PRPLGPRAAPR
Trigger: CCGCGGAGCCGCCCTCGGGCCCAGAGGCCGCGGTCAACACGCACTGCGCCGAGCTGTACGCGTCGGGACCCG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS GCA 72 bp TGCCCTCCGCCCGCCGGGCCCCCGGTCGGTCTGTCCTaGTGGTCCGTCCTCCCCGCGTCCTGGTCGCGTCTC +
Preference number: 6 (lower is better)
Translates to: CPPPAGPPVGLS*WSVLPASWSRL
Trigger: GAGACGCGACCAGGACGCGGGGAGGACGGACCAGCAGGACAGACCGACCGGGGGCCCGGCGGGCGGAGGGCA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000399849.4
ENST00000571875.2
ENST00000571990.1
ENST00000574370.1
ENST00000619757.5
CDS CCA 72 bp CCTCCGCCCGCCGGGCCCCCGGTCGGTCTGTCCTGCTaGTCCGTCCTCCCCGCGTCCTGGTCGCGTCTCAGC +
Preference number: 6 (lower is better)
Translates to: PPPAGPPVGLSC*SVLPASWSRLS
Trigger: GCTGAGACGCGACCAGGACGCGGGGAGGACGGACCAGCAGGACAGACCGACCGGGGGCCCGGCGGGCGGAGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000399849.4
ENST00000571875.2
ENST00000571990.1
ENST00000574370.1
CDS GCA 72 bp ACACTCTTATCTGGAGCGGCCCGGGCCGGCGGGCGCTaGTGCGGCTATGGCGCCACCTCGCGGGCGCGCAGG +
Preference number: 6 (lower is better)
Translates to: TLLSGAARAGGR*CGYGATSRARR
Trigger: CCTGCGCGCCCGCGAGGTGGCGCCATAGCCGCAGCAGCGCCCGCCGGCCCGGGCCGCTCCAGATAAGAGTGT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000571875.2
ENST00000571990.1
ENST00000574370.1
CDS CCA 72 bp GCGGCAGGCCGCTGCCTTCCTCCCGCGCACCTGAGCTaGAGGCGCACAGATGCTGAGCCCGCGGGGAGGGGC +
Preference number: 6 (lower is better)
Translates to: AAGRCLPPAHLS*RRTDAEPAGRG
Trigger: GCCCCTCCCCGCGGGCTCAGCATCTGTGCGCCTCCAGCTCAGGTGCGCGGGAGGAAGGCAGCGGCCTGCCGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000571875.2
ENST00000574370.1
CDS GCA 72 bp CGGCGGCCCCAGCGGCCACTTCGGCCGCCTCGGCCCTaGCGTACAGCGCTTCCTCCTCCTCCACGTGAGCCT +
Preference number: 6 (lower is better)
Translates to: RRPQRPLRPPRP*RTALPPPPREP
Trigger: AGGCTCACGTGGAGGAGGAGGAAGCGCTGTACGGCAGGGCCGAGGCGGCCGAAGTGGCCGCTGGGGCCGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CCA 72 bp GGCGAGGGGCGCTCTAGGTGGGAGAGAAACGGTCGATaGTCCGGCCGTCGGGCCCGGCCGCCAGGTGAGCGC +
Preference number: 6 (lower is better)
Translates to: GEGRSRWERNGR*SGRRARPPGER
Trigger: GCGCTCACCTGGCGGCCGGGCCCGACGGCCGGACCATCGACCGTTTCTCTCCCACCTAGAGCGCCCCTCGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CAA 72 bp CCGCCGCCGCCGCCGCCGCCCCGCAGGTGGCAGTACTaGCCGTGGCGCTTGAGGCGTTTCTTGCACAGCGCC +
Preference number: 6 (lower is better)
Translates to: PPPPPPPRRWQY*PWRLRRFLHSA
Trigger: GGCGCTGTGCAAGAAACGCCTCAAGCGCCACGGCAAGTACTGCCACCTGCGGGGCGGCGGCGGCGGCGGCGG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS GCA 72 bp ACAAAGAGGGGAGCAGCGGCGCTCCGAGGCACAGAGTaGGGCGGCCGGGCCGGGTCCCGACGCGTACAGCTC +
Preference number: 6 (lower is better)
Translates to: TKRGAAALRGTE*GGRAGSRRVQL
Trigger: GAGCTGTACGCGTCGGGACCCGGCCCGGCCGCCGCACTCTGTGCCTCGGAGCGCCGCTGCTCCCCTCTTTGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS GCA 72 bp GGCTGGGGTCCTCGCTGCTACCGGTCTCCTCGCTGCTaGTCTTGTAGTCGTCGCCGTCGCCGCCCGCGCCGG +
Preference number: 6 (lower is better)
Translates to: GWGPRCYRSPRC*SCSRRRRRPRR
Trigger: CCGGCGCGGGCGGCGACGGCGACGACTACAAGAGCAGCAGCGAGGAGACCGGTAGCAGCGAGGACCCCAGCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS GCA 72 bp GCGGGCTGGGGTCCTCGCTGCTACCGGTCTCCTCGCTaGTGCTCTTGTAGTCGTCGCCGTCGCCGCCCGCGC +
Preference number: 6 (lower is better)
Translates to: AGWGPRCYRSPR*CSCSRRRRRPR
Trigger: GCGCGGGCGGCGACGGCGACGACTACAAGAGCAGCAGCGAGGAGACCGGTAGCAGCGAGGACCCCAGCCCGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS GCA 72 bp AGGCTCTCCAGCGCCACCTTGGGGTCGTGCAGGAAGTaGGTGGTCTGCGCCAGCAGCTCGGCCGCGGCCGCC +
Preference number: 6 (lower is better)
Translates to: RLSSATLGSCRK*VVCASSSAAAA
Trigger: GGCGGCCGCGGCCGAGCTGCTGGCGCAGACCACGCACTTCCTGCACGACCCCAAGGTGGCGCTGGAGAGCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CCA 72 bp GGCATGGGTAGCCCTCGAGGTGGCCGCCAGGCGGGCTaGGGTCCTCGCTGCTACCGGTCTCCTCGCTGCTGC +
Preference number: 6 (lower is better)
Translates to: GMGSPRGGRQAG*GPRCYRSPRCC
Trigger: GCAGCAGCGAGGAGACCGGTAGCAGCGAGGACCCCAGCCCGCCTGGCGGCCACCTCGAGGGCTACCCATGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CCA 72 bp GAAGCTCTCGGGCTCGCCATAGGCCAGGTGCGGGCATaGGTAGCCCTCGAGGTGGCCGCCAGGCGGGCTGGG +
Preference number: 6 (lower is better)
Translates to: EALGLAIGQVRA*VALEVAARRAG
Trigger: CCCAGCCCGCCTGGCGGCCACCTCGAGGGCTACCCATGCCCGCACCTGGCCTATGGCGAGCCCGAGAGCTTC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CCA 72 bp GTCTCAGCCCCGCCGCGCTTTCCGCACACTCTTATCTaGAGCGGCCCGGGCCGGCGGGCGCTGCTGCGGCTA +
Preference number: 6 (lower is better)
Translates to: VSAPPRFPHTLI*SGPGRRALLRL
Trigger: TAGCCGCAGCAGCGCCCGCCGGCCCGGGCCGCTCCAGATAAGAGTGTGCGGAAAGCGCGGCGGGGCTGAGAC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000571875.2
ENST00000571990.1
ENST00000574370.1
CDS CAA 90 bp TCAGCCAGCGGCCGCTCTGGCGCCGCGGAGCCCGGCGGGCTCTTCTaGGACAGGTCCAGGCCACAAAGAGGGGAGCAGCGGCGCTCCGAG +
Preference number: 6 (lower is better)
Translates to: SASGRSGAAEPGGLF*DRSRPQRGEQRRSE
Trigger: CTCGGAGCGCCGCTGCTCCCCTCTTTGTGGCCTGGACCTGTCCAAGAAGAGCCCGCCGGGCTCCGCGGCGCCAGAGCGGCCGCTGGCTGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CAA 90 bp CCGCCGCCGCCGCCGCCCCGCAGGTGGCAGTACTTGCCGTGGCGCTaGAGGCGTTTCTTGCACAGCGCCACGAGGTCGGGGATCTGCAGG +
Preference number: 6 (lower is better)
Translates to: PPPPPPRRWQYLPWR*RRFLHSATRSGICR
Trigger: CCTGCAGATCCCCGACCTCGTGGCGCTGTGCAAGAAACGCCTCAAGCGCCACGGCAAGTACTGCCACCTGCGGGGCGGCGGCGGCGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CCA 72 bp CCGCCGCCGCCGCCCCGCAGGTGGCAGTACTTGCCGTaGCGCTTGAGGCGTTTCTTGCACAGCGCCACGAGG +
Preference number: 6 (lower is better)
Translates to: PPPPPRRWQYLP*RLRRFLHSATR
Trigger: CCTCGTGGCGCTGTGCAAGAAACGCCTCAAGCGCCACGGCAAGTACTGCCACCTGCGGGGCGGCGGCGGCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CCA 72 bp GCAGCGACAGAGCGGGCTGGCGAGGGGCGCTCTAGGTaGGAGAGAAACGGTCGATGGTCCGGCCGTCGGGCC +
Preference number: 6 (lower is better)
Translates to: AATERAGEGRSR*ERNGRWSGRRA
Trigger: GGCCCGACGGCCGGACCATCGACCGTTTCTCTCCCACCTAGAGCGCCCCTCGCCAGCCCGCTCTGTCGCTGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CCA 72 bp TTCCCTCAGCTGAGCGGGGGCATCAGCCCTGCGGCCTaGGCACCGGCGAAGGACCGGCTGCCCTCTGGAGTG +
Preference number: 6 (lower is better)
Translates to: FPQLSGGISPAA*APAKDRLPSGV
Trigger: CACTCCAGAGGGCAGCCGGTCCTTCGCCGGTGCCCAGGCCGCAGGGCTGATGCCCCCGCTCAGCTGAGGGAA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576444.1
CDS CCA 72 bp GTCGGTCTGTCCTGCTGGTCCGTCCTCCCCGCGTCCTaGTCGCGTCTCAGCCCCGCCGCGCTTTCCGCACAC +
Preference number: 6 (lower is better)
Translates to: VGLSCWSVLPAS*SRLSPAALSAH
Trigger: GTGTGCGGAAAGCGCGGCGGGGCTGAGACGCGACCAGGACGCGGGGAGGACGGACCAGCAGGACAGACCGAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000571875.2
ENST00000571990.1
ENST00000574370.1
CDS TCA 72 bp CCGCCTCTGCGCCGTCAGCCAGGCGGCCGGTGTAGATaGAGTCCAGCACCAGGCGGAACACGGCCGGGCTCA +
Preference number: 6 (lower is better)
Translates to: PPLRRQPGGRCR*SPAPGGTRPGS
Trigger: TGAGCCCGGCCGTGTTCCGCCTGGTGCTGGACTTCATCTACACCGGCCGCCTGGCTGACGGCGCAGAGGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000571990.1
ENST00000619757.5
CDS GCA 72 bp GCCGCGGCCGCCTTGTCCTGCTGCTTCAGGCTCAGCTaGTCGGCCGTGAGGCGAGCCACAGCAAAGACGCCC +
Preference number: 6 (lower is better)
Translates to: AAAALSCCFRLS*SAVRRATAKTP
Trigger: GGGCGTCTTTGCTGTGGCTCGCCTCACGGCCGAGCAGCTGAGCCTGAAGCAGCAGGACAAGGCGGCCGCGGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CCA 72 bp AATGGGTCGGAAGGCGGTGCGGCCTCCTCCAGCTTCTaGAAGGGCAGCGGCGGCAGCGACGGCAGGGCGAGA +
Preference number: 6 (lower is better)
Translates to: NGSEGGAASSSF*KGSGGSDGRAR
Trigger: TCTCGCCCTGCCGTCGCTGCCGCCGCTGCCCTTCCAGAAGCTGGAGGAGGCCGCACCGCCTTCCGACCCATT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CCA 72 bp TCTCCAGCGCCACCTTGGGGTCGTGCAGGAAGTGCGTaGTCTGCGCCAGCAGCTCGGCCGCGGCCGCCTTGT +
Preference number: 6 (lower is better)
Translates to: SPAPPWGRAGSA*SAPAARPRPPC
Trigger: ACAAGGCGGCCGCGGCCGAGCTGCTGGCGCAGACCACGCACTTCCTGCACGACCCCAAGGTGGCGCTGGAGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS CAA 72 bp CCGCCGCCCCGCAGGTGGCAGTACTTGCCGTGGCGCTaGAGGCGTTTCTTGCACAGCGCCACGAGGTCGGGG +
Preference number: 6 (lower is better)
Translates to: PPPRRWQYLPWR*RRFLHSATRSG
Trigger: CCCCGACCTCGTGGCGCTGTGCAAGAAACGCCTCAAGCGCCACGGCAAGTACTGCCACCTGCGGGGCGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS GCA 72 bp CCTCGAGGTGGCCGCCAGGCGGGCTGGGGTCCTCGCTaGTACCGGTCTCCTCGCTGCTGCTCTTGTAGTCGT +
Preference number: 6 (lower is better)
Translates to: PRGGRQAGWGPR*YRSPRCCSCSR
Trigger: ACGACTACAAGAGCAGCAGCGAGGAGACCGGTAGCAGCGAGGACCCCAGCCCGCCTGGCGGCCACCTCGAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS GCA 72 bp GAGTGGCCGGGCGCCTCCATCGTGTCCAGCATCGTCTaGCCAGCACACTCTCCTGCGGGGACACACACCGGC +
Preference number: 6 (lower is better)
Translates to: EWPGASIVSSIV*PAHSPAGTHTG
Trigger: GCCGGTGTGTGTCCCCGCAGGAGAGTGTGCTGGGCAGACGATGCTGGACACGATGGAGGCGCCCGGCCACTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000576444.1
CDS GCA 72 bp CATCGTGTCCAGCATCGTCTGCCCAGCACACTCTCCTaGGGGGACACACACCGGCCGGGTGAGAGCCGTGCG +
Preference number: 6 (lower is better)
Translates to: HRVQHRLPSTLS*GDTHRPGESRA
Trigger: CGCACGGCTCTCACCCGGCCGGTGTGTGTCCCCGCAGGAGAGTGTGCTGGGCAGACGATGCTGGACACGATG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000576444.1
CDS CCA 72 bp GGCGGCCTGCACGCCCCAGGGCACCTGGCTGGGTGCTaGGGCTTCCGAGAAGAAAACTGTTCAGGCGCAGTG +
Preference number: 6 (lower is better)
Translates to: GGLHAPGHLAGC*GFREENCSGAV
Trigger: CACTGCGCCTGAACAGTTTTCTTCTCGGAAGCCCCAGCACCCAGCCAGGTGCCCTGGGGCGTGCAGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000576444.1
CDS CCA 72 bp ACTTGGCCAGCGGGTAGAGGCTCTCCAGCGCCACCTTaGGGTCGTGCAGGAAGTGCGTGGTCTGCGCCAGCA +
Preference number: 6 (lower is better)
Translates to: TWPAGRGSPAPP*GRAGSAWSAPA
Trigger: TGCTGGCGCAGACCACGCACTTCCTGCACGACCCCAAGGTGGCGCTGGAGAGCCTCTACCCGCTGGCCAAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000322941.3
ENST00000399849.4
ENST00000619757.5
CDS TCA 72 bp GAACCTGGGCAGAGGTGTTACCCACACAGCCCGCCCTaGACTTTCGGGTCTCCTAAAGGAACCCACGACGAG +
Preference number: 6 (lower is better)
Translates to: EPGQRCYPHSPP*TFGSPKGTHDE
Trigger: CTCGTCGTGGGTTCCTTTAGGAGACCCGAAAGTTCAGGGCGGGCTGTGTGGGTAACACCTCTGCCCAGGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000574370.1
CDS GCA 72 bp GAGTGGCCGGGCGCCTCCATCGTGTCCAGCATCGTCTaGCCAGCACACTCTCCCGATTTAAGTAAAATGTCC +
Preference number: 6 (lower is better)
Translates to: EWPGASIVSSIV*PAHSPDLSKMS
Trigger: GGACATTTTACTTAAATCGGGAGAGTGTGCTGGGCAGACGATGCTGGACACGATGGAGGCGCCCGGCCACTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000322941.3
CDS CCA 72 bp ACTCCCCGTAGACATTACTGTACGGCACTGTCCACTTaGACGCACTCCCCAACACACCCACCCTCACTCAGG +
Preference number: 6 (lower is better)
Translates to: TPRRHYCTALST*THSPTHPPSLR
Trigger: CCTGAGTGAGGGTGGGTGTGTTGGGGAGTGCGTCCAAGTGGACAGTGCCGTACAGTAATGTCTACGGGGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000574370.1
CDS CCA 72 bp AGAATCCCCCTGTACGCCGTTTTGAAGAATCCCGCGTaGACTTCTTCTCCAACCCACCCGCCCGAAGGAAAC +
Preference number: 6 (lower is better)
Translates to: RIPLYAVLKNPA*TSSPTHPPEGN
Trigger: GTTTCCTTCGGGCGGGTGGGTTGGAGAAGAAGTCCACGCGGGATTCTTCAAAACGGCGTACAGGGGGATTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000571875.2
ENST00000574370.1
CDS TCA 72 bp ACTCAGGCGCATGGATTCGGTGTGCGCGGCATAAACTaGTTTGTCCCCAGCCCTATCCAGGCACTGATACTA +
Preference number: 6 (lower is better)
Translates to: TQAHGFGVRGIN*FVPSPIQALIL
Trigger: TAGTATCAGTGCCTGGATAGGGCTGGGGACAAATCAGTTTATGCCGCGCACACCGAATCCATGCGCCTGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000574370.1