RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HHLA2 (Homo sapiens)

Ensembl gene IDs: ENSG00000114455

Ensembl transcript IDs: ENST00000357759.9, ENST00000462629.5, ENST00000463019.7, ENST00000467282.5, ENST00000467562.5, ENST00000467761.5, ENST00000482099.1, ENST00000482430.5, ENST00000489514.6, ENST00000491820.5, ENST00000619531.4

Found 430 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGCCATCTGGATGTATACGTGCAAATCACAGGGGATGCGATGCTTaGCTTGGGCTCAGAGGCCTGACACATAGGGCCCTTTTCCCTAGC +
Preference number: 1 (lower is better)
Translates to: RPSGCIRANHRGCDA*LGLRGLTHRALFPS
Trigger: GCTAGGGAAAAGGGCCCTATGTGTCAGGCCTCTGAGCCCAAGCCAAGCATCGCATCCCCTGTGATTTGCACGTATACATCCAGATGGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR GCA 90 bp GCTCTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCTaGTCTCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCC +
Preference number: 1 (lower is better)
Translates to: ALVFNLSTKVTLALT*SLTHYQLIRLGINP
Trigger: GGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR CCA 90 bp ATGTTTTGTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTaGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACA +
Preference number: 1 (lower is better)
Translates to: MFCGQGGSHKVHSQG*GELQRTFLRVGKIT
Trigger: TGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCACAAAACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR TCA 90 bp ATTACAAAGTACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATTaGTCAGTTAGGGTGGGGCAGGAACAAATCACAATGGTGGAATGT +
Preference number: 1 (lower is better)
Translates to: ITKYLLKGGGDYKVH*SVRVGQEQITMVEC
Trigger: ACATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTACTTTGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR TCA 90 bp AGTCTTTGGTGCCCTAAGATTCATCCCAAATCGAGTTGGTTACCCTaGTACAACCGTTCATATAAAACTAGACTAAAATACCTTGTCAAA +
Preference number: 1 (lower is better)
Translates to: SLWCPKIHPKSSWLP*YNRSYKTRLKYLVK
Trigger: TTTGACAAGGTATTTTAGTCTAGTTTTATATGAACGGTTGTATCAGGGTAACCAACTCGATTTGGGATGAATCTTAGGGCACCAAAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR CCA 90 bp CATAAGAATAAGTACATTGGCTCACCCTCATATGCACAATGCCATTaGAGATCTTCTCTACAAATAACAATAGGAGACAAGAAGAACAAC +
Preference number: 1 (lower is better)
Translates to: HKNKYIGSPSYAQCH*RSSLQITIGDKKNN
Trigger: GTTGTTCTTCTTGTCTCCTATTGTTATTTGTAGAGAAGATCTCCAATGGCATTGTGCATATGAGGGTGAGCCAATGTACTTATTCTTATG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482099.1
3UTR CCA 90 bp ACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTaGATCTTCAGTTACTTTAGGCCATCTGGATGTATACGTGCAAAT +
Preference number: 1 (lower is better)
Translates to: TMVECHQLRLFLLLL*IFSYFRPSGCIRAN
Trigger: ATTTGCACGTATACATCCAGATGGCCTAAAGTAACTGAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATTGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR GCA 90 bp TTATTTCACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAGAGTCAGCGAAGGGTTCACAGGGGATGCGATaGTTGGCTTGGGCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: LFHLGAGGLSPKRESAKGSQGMR*LAWAQR
Trigger: CCTCTGAGCCCAAGCCAAGCATCGCATCCCCTGTGA...ACCCTTCGCTGACTCTCTTTTCGGACTCAGCCCACCTGCACCCAGGTGAAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp TGTTTTGTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATAGGGGATGCGATGCTTaGCTTGGGCTCAGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: CFVGRVDLTKYILKGGENRGCDA*LGLRGL
Trigger: CAGGCCTCTGAGCCCAAGCCAAGCATCGCATCCCCT...ATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCACAAAACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR GCA 90 bp GTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAATCACAGGGGATGCGATaGTTGGCTTGGGCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: VGRVDLTKYILKGGENYKSQGMR*LAWAQR
Trigger: CCTCTGAGCCCAAGCCAAGCATCGCATCCCCTGTGA...TTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp GCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACAGGGGATGCGATGCTTaGCTTGGGCTCAGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: AGWISQSTFSRVGRITKNRGCDA*LGLRGL
Trigger: CAGGCCTCTGAGCCCAAGCCAAGCATCGCATCCCCT...GTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR TCA 90 bp TTATTTCACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAGAGTCAGCGAAGGGTACCTTTCCACTAAGGTaGCTTTGGCTCTTACCTGCT +
Preference number: 2 (lower is better)
Translates to: LFHLGAGGLSPKRESAKGTFPLR*LWLLPA
Trigger: AGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGT...ACCCTTCGCTGACTCTCTTTTCGGACTCAGCCCACCTGCACCCAGGTGAAATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR GCA 90 bp GTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGTCACAGGGGATGCGATaGTTGGCTTGGGCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: VHSQGWGELQRTFLRVGKSQGMR*LAWAQR
Trigger: CCTCTGAGCCCAAGCCAAGCATCGCATCCCCTGTGA...CTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp GTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATGCGATGCTTGGCTTaGGCTCAGAGGCCTGACACA +
Preference number: 2 (lower is better)
Translates to: VHSQGWGELQRTFLRVGKMRCLA*AQRPDT
Trigger: TGTGTCAGGCCTCTGAGCCCAAGCCAAGCATCGCAT...CTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp CTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCTGCTCTCTCACCATGCGATGCTTGGCTTaGGCTCAGAGGCCTGACACA +
Preference number: 2 (lower is better)
Translates to: LVFNLSTKVTLALTCSLTMRCLA*AQRPDT
Trigger: TGTGTCAGGCCTCTGAGCCCAAGCCAAGCATCGCAT...GGTGAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp GGTGACTTTGGCTCTTACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGCGACAGGCCATTGCCTaGAATTGTGGTGAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: GDFGSYLLSHPLSVDQIGRQAIA*NCGEER
Trigger: CCTTTCTTCACCACAATTCCAGGCAATGGCCTGTCG...CCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTAAGAGCCAAAGTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR GCA 90 bp GTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGAGTGGTAGAATTGTCTaGTCCGACAGGCCATTGCCT +
Preference number: 2 (lower is better)
Translates to: VHSQGWGELQRTFLRVGKSGRIV*SDRPLP
Trigger: AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACT...CTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR GCA 90 bp GGTTTCCAGGCTCTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCAGTGGTAGAATTGTCTaGTCCGACAGGCCATTGCCT +
Preference number: 2 (lower is better)
Translates to: GFQALVFNLSTKVTLALTSGRIV*SDRPLP
Trigger: AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACT...GGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAGAGCCTGGAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR GCA 90 bp TGTTTTGTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTGGCTCACCCTCATATaGACAATGCCATTGGAGATC +
Preference number: 2 (lower is better)
Translates to: CFVGRVDLTKYILKGGENWLTLI*TMPLEI
Trigger: GATCTCCAATGGCATTGTGCATATGAGGGTGAGCCA...ATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCACAAAACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482099.1
3UTR-3UTR CCA 90 bp GGTTTCCAGGCTCTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCCGACAGGCCATTGCCTaGAATTGTGGTGAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: GFQALVFNLSTKVTLALTRQAIA*NCGEER
Trigger: CCTTTCTTCACCACAATTCCAGGCAATGGCCTGTCG...GGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAGAGCCTGGAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR TCA 90 bp CTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCTGCTCTCTCACCACCTTTCCACTAAGGTaGCTTTGGCTCTTACCTGCT +
Preference number: 2 (lower is better)
Translates to: LVFNLSTKVTLALTCSLTTFPLR*LWLLPA
Trigger: AGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGT...GGTGAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR GCA 90 bp TTTGTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACACTTTGGCTCTTACCTaGTCTCTCACCCATTATCAG +
Preference number: 2 (lower is better)
Translates to: FVGRVDLTKYILKGGENYTLALT*SLTHYQ
Trigger: CTGATAATGGGTGAGAGAGCAGGTAAGAGCCAAAGT...GTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp GGCTCTTACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTCACTGTAACCTCCTaGGCTGACTGTAACAGAAAT +
Preference number: 2 (lower is better)
Translates to: GSYLLSHPLSVDQIGNQPLTVTS*ADCNRN
Trigger: ATTTCTGTTACAGTCAGCCCAGGAGGTTACAGTGAG...GGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTAAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp GAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTTAAGAGGGGATGCGATGCTTaGCTTGGGCTCAGAGGCCTG +
Preference number: 2 (lower is better)
Translates to: ELQRTFLRVGKITKYLLKRGCDA*LGLRGL
Trigger: CAGGCCTCTGAGCCCAAGCCAAGCATCGCATCCCCT...CTTAAGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR TCA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTTCACCCATTATCAGTTaGTCAGATTGGGAATCAACC +
Preference number: 2 (lower is better)
Translates to: VMHFFQILSGELTVTSWASPIIS*SDWEST
Trigger: GGTTGATTCCCAATCTGATCAACTGATAATGGGTGA...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR GCA 90 bp AACATCCAGGCATTTATACTCAATGCAGGTAGTGGGTCAGTGAATGATGTCTTGAGTGGTAGAATTGTCTaGTCCGACAGGCCATTGCCT +
Preference number: 2 (lower is better)
Translates to: NIQAFILNAGSGSVNDVLSGRIV*SDRPLP
Trigger: AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACT...CAAGACATCATTCACTGACCCACTACCTGCATTGAGTATAAATGCCTGGATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR GCA 90 bp GTTACTTTAGGCCATCTGGATGTATACGTGCAAATCACAGGGGATGCGATGCTTACTTTGGCTCTTACCTaGTCTCTCACCCATTATCAG +
Preference number: 2 (lower is better)
Translates to: VTLGHLDVYVQITGDAMLTLALT*SLTHYQ
Trigger: CTGATAATGGGTGAGAGAGCAGGTAAGAGCCAAAGT...AAGCATCGCATCCCCTGTGATTTGCACGTATACATCCAGATGGCCTAAAGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGTACATTCTCAAGGGTaGGGAGAATTACAAAGAACC +
Preference number: 2 (lower is better)
Translates to: VMHFFQILSGELTVTSWAVHSQG*GELQRT
Trigger: GGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTAC...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR CAA 90 bp CTTGGTTTCCAGGCTCTGGTTTTTAACCTTTCCACTAAGGTGACTTaGGCTCTTACCTGCTCTCTCACCCATTATCAGTTGATCAGATTG +
Preference number: 2 (lower is better)
Translates to: LGFQALVFNLSTKVT*ALTCSLTHYQLIRL
Trigger: CAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAGAGCCTGGAAACCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR TCA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTTCGAGTTGGTTACCCTaGTACAACCGTTCATATAAA +
Preference number: 2 (lower is better)
Translates to: VMHFFQILSGELTVTSWASSWLP*YNRSYK
Trigger: TTTATATGAACGGTTGTATCAGGGTAACCAACTCGA...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR GCA 90 bp AATAAGTACATTGGCTCACCCTCATATGCACAATGCCATTGGAGATCTTCTCTAAGTGGTAGAATTGTCTaGTCCGACAGGCCATTGCCT +
Preference number: 2 (lower is better)
Translates to: NKYIGSPSYAQCHWRSSLSGRIV*SDRPLP
Trigger: AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACT...TAGAGAAGATCTCCAATGGCATTGTGCATATGAGGGTGAGCCAATGTACTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482099.1
3UTR-3UTR GCA 90 bp AAATACCTTGTCAAATCAATCATCTTGGTTTCCAGGCTCTGGTTTTTAACCTTTTCACAGGGGATGCGATaGTTGGCTTGGGCTCAGAGG +
Preference number: 2 (lower is better)
Translates to: KYLVKSIILVSRLWFLTFSQGMR*LAWAQR
Trigger: CCTCTGAGCCCAAGCCAAGCATCGCATCCCCTGTGA...AAAGGTTAAAAACCAGAGCCTGGAAACCAAGATGATTGATTTGACAAGGTATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp GTTACTTTAGGCCATCTGGATGTATACGTGCAAATCACAGGGGATGCGATGCTTTACTGTCTTAGTCTTTaGTGCCCTAAGATTCATCCC +
Preference number: 2 (lower is better)
Translates to: VTLGHLDVYVQITGDAMLYCLSL*CPKIHP
Trigger: GGGATGAATCTTAGGGCACCAAAGACTAAGACAGTA...AAGCATCGCATCCCCTGTGATTTGCACGTATACATCCAGATGGCCTAAAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR GCA 90 bp ATACCTTGTCAAATCAATCATCTTGGTTTCCAGGCTCTGGTTTTTAACCTTTCCAGTGGTAGAATTGTCTaGTCCGACAGGCCATTGCCT +
Preference number: 2 (lower is better)
Translates to: IPCQINHLGFQALVFNLSSGRIV*SDRPLP
Trigger: AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACT...GGAAAGGTTAAAAACCAGAGCCTGGAAACCAAGATGATTGATTTGACAAGGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp ATACCTTGTCAAATCAATCATCTTGGTTTCCAGGCTCTGGTTTTTAACCTTTCCCGACAGGCCATTGCCTaGAATTGTGGTGAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: IPCQINHLGFQALVFNLSRQAIA*NCGEER
Trigger: CCTTTCTTCACCACAATTCCAGGCAATGGCCTGTCG...GGAAAGGTTAAAAACCAGAGCCTGGAAACCAAGATGATTGATTTGACAAGGTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTTCAAATCAATCATCTTaGTTTCCAGGCTCTGGTTTT +
Preference number: 2 (lower is better)
Translates to: VMHFFQILSGELTVTSWASNQSS*FPGSGF
Trigger: AAAACCAGAGCCTGGAAACCAAGATGATTGATTTGA...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp GGTGACTTTGGCTCTTACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGTCAAATCAATCATCTTaGTTTCCAGGCTCTGGTTTT +
Preference number: 2 (lower is better)
Translates to: GDFGSYLLSHPLSVDQIGSNQSS*FPGSGF
Trigger: AAAACCAGAGCCTGGAAACCAAGATGATTGATTTGA...CCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTAAGAGCCAAAGTCACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp ACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCATGCGATGCTTGGCTTaGGCTCAGAGGCCTGACACA +
Preference number: 2 (lower is better)
Translates to: TMVECHQLRLFLLLLWIFMRCLA*AQRPDT
Trigger: TGTGTCAGGCCTCTGAGCCCAAGCCAAGCATCGCAT...GAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp TCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAATTGATAGTAGTGTTTTaGGGTGGGCGGCAAAAAGCT +
Preference number: 2 (lower is better)
Translates to: SRVGRITKNLLKGGEDYKLIVVF*GGRQKA
Trigger: AGCTTTTTGCCGCCCACCCCAAAACACTACTATCAA...TTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000482099.1
3UTR-3UTR GCA 90 bp GGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTACTTTGGCTCTTACCTaGTCTCTCACCCATTATCAG +
Preference number: 2 (lower is better)
Translates to: GRITKNLLKGGEDYKVPSTLALT*SLTHYQ
Trigger: CTGATAATGGGTGAGAGAGCAGGTAAGAGCCAAAGT...AGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR GCA 90 bp GGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTCGTGCTATATTATCCTaGAACCCCTGCTGCTGTTTT +
Preference number: 2 (lower is better)
Translates to: GRITKNLLKGGEDYKVPSRAILS*NPCCCF
Trigger: AAAACAGCAGCAGGGGTTGCAGGATAATATAGCACG...AGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482099.1
3UTR-3UTR GCA 90 bp GGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTCCCTCATATGCACAATaGCATTGGAGATCTTCTCTA +
Preference number: 2 (lower is better)
Translates to: GRITKNLLKGGEDYKVPSPSYAQ*HWRSSL
Trigger: TAGAGAAGATCTCCAATGGCATTGTGCATATGAGGG...AGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482099.1
3UTR-3UTR CCA 90 bp AAATACCTTGTCAAATCAATCATCTTGGTTTCCAGGCTCTGGTTTTTAACCTTTCGACAGGCCATTGCCTaGAATTGTGGTGAAGAAAGG +
Preference number: 2 (lower is better)
Translates to: KYLVKSIILVSRLWFLTFRQAIA*NCGEER
Trigger: CCTTTCTTCACCACAATTCCAGGCAATGGCCTGTCG...AAAGGTTAAAAACCAGAGCCTGGAAACCAAGATGATTGATTTGACAAGGTATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp GGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTTACTGTCTTAGTCTTTaGTGCCCTAAGATTCATCCC +
Preference number: 2 (lower is better)
Translates to: GRITKNLLKGGEDYKVPSYCLSL*CPKIHP
Trigger: GGGATGAATCTTAGGGCACCAAAGACTAAGACAGTA...AGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp TGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTTACTGTCTTAGTCTTTaGTGCCCTAAGATTCATCCC +
Preference number: 2 (lower is better)
Translates to: WISQSTFSRVGRITKNLLYCLSL*CPKIHP
Trigger: GGGATGAATCTTAGGGCACCAAAGACTAAGACAGTA...AAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR GCA 90 bp GTGGGGCAGGAACAAATCACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTATGTCTTAGTCTTTGGTaGCCTAAGATTCATCCCAAA +
Preference number: 2 (lower is better)
Translates to: VGQEQITMVECHQLRLFLCLSLW*PKIHPK
Trigger: TTTGGGATGAATCTTAGGGCACCAAAGACTAAGACA...TAAAAATAGCCTTAACTGATGACATTCCACCATTGTGATTTGTTCCTGCCCCAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp TGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTTTGGTTTCCAGGCTCTaGTTTTTAACCTTTCCACTA +
Preference number: 2 (lower is better)
Translates to: WISQSTFSRVGRITKNLLLVSRL*FLTFPL
Trigger: TAGTGGAAAGGTTAAAAACCAGAGCCTGGAAACCAA...AAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR TCA 90 bp AGATTCATCCCAAATCGAGTTGGTTACCCTGATACAACCGTTCATATAAAACTATCACCCATTATCAGTTaGTCAGATTGGGAATCAACC +
Preference number: 2 (lower is better)
Translates to: RFIPNRVGYPDTTVHIKLSPIIS*SDWEST
Trigger: GGTTGATTCCCAATCTGATCAACTGATAATGGGTGA...TAGTTTTATATGAACGGTTGTATCAGGGTAACCAACTCGATTTGGGATGAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp TGGGGAAGATTACAAAGTACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATTTCAAATCAATCATCTTaGTTTCCAGGCTCTGGTTTT +
Preference number: 2 (lower is better)
Translates to: WGRLQSTFLRVGEITKYISNQSS*FPGSGF
Trigger: AAAACCAGAGCCTGGAAACCAAGATGATTGATTTGA...AATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTACTTTGTAATCTTCCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR CAA 90 bp ATCACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTaGTGGATCTTCAGTTACTTTAGGCCATCTGGATGTATACGTGCA +
Preference number: 2 (lower is better)
Translates to: ITMVECHQLRLFLLL*WIFSYFRPSGCIRA
Trigger: TGCACGTATACATCCAGATGGCCTAAAGTAACTGAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATTGTGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CCA 90 bp AGATTCATCCCAAATCGAGTTGGTTACCCTGATACAACCGTTCATATAAAACTATTGGTTTCCAGGCTCTaGTTTTTAACCTTTCCACTA +
Preference number: 2 (lower is better)
Translates to: RFIPNRVGYPDTTVHIKLLVSRL*FLTFPL
Trigger: TAGTGGAAAGGTTAAAAACCAGAGCCTGGAAACCAA...TAGTTTTATATGAACGGTTGTATCAGGGTAACCAACTCGATTTGGGATGAATCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR CCA 72 bp GGATGTATACGTGCAAATCACAGGGGATGCGATGCTTaGCTTGGGCTCAGAGGCCTGACACATAGGGCCCTT +
Preference number: 3 (lower is better)
Translates to: GCIRANHRGCDA*LGLRGLTHRAL
Trigger: AAGGGCCCTATGTGTCAGGCCTCTGAGCCCAAGCCAAGCATCGCATCCCCTGTGATTTGCACGTATACATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp GTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGCAGGGGATGCGATGCTaGGCTTGGGCTCAGAGGCCT +
Preference number: 3 (lower is better)
Translates to: VHSQGWGELQRTFLRVGKQGMRC*AWAQRP
Trigger: AGGCCTCTGAGCCCAAGCCAAGCATCGCATCCCCTG...CTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp TTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGACTGTAACAGATGCTCCGACAGGCCATaGCCTGGAATTGTGGTGAAG +
Preference number: 3 (lower is better)
Translates to: FQILSGELTVTSWADCNRCSDRP*PGIVVK
Trigger: CTTCACCACAATTCCAGGCAATGGCCTGTCGGAGCA...TCTGTTACAGTCAGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR CCA 72 bp GGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTaGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGG +
Preference number: 3 (lower is better)
Translates to: GQGGSHKVHSQG*GELQRTFLRVG
Trigger: CCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR CCA 72 bp GGCGGTGAAGTTAAGAGCAATGTTTTGTGGGCAGGGTaGATCTCACAAAGTACATTCTCAAGGGTGGGGAGA +
Preference number: 3 (lower is better)
Translates to: GGEVKSNVLWAG*ISQSTFSRVGR
Trigger: TCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCACAAAACATTGCTCTTAACTTCACCGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp TTATTTCACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAGAGTCAGCGAAGGGTGTCAAATCAATCATCTaGGTTTCCAGGCTCTGGTTT +
Preference number: 3 (lower is better)
Translates to: LFHLGAGGLSPKRESAKGVKSII*VSRLWF
Trigger: AAACCAGAGCCTGGAAACCAAGATGATTGATTTGAC...ACCCTTCGCTGACTCTCTTTTCGGACTCAGCCCACCTGCACCCAGGTGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR TCA 72 bp AATAAAGCTGTTTATTTCACCTGGGTGCAGGTGGGCTaGGTCCGAAAAGAGAGTCAGCGAAGGGTGATGGAT +
Preference number: 3 (lower is better)
Translates to: NKAVYFTWVQVG*VRKESQRRVMD
Trigger: ATCCATCACCCTTCGCTGACTCTCTTTTCGGACTCAGCCCACCTGCACCCAGGTGAAATAAACAGCTTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp TCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCTGCTCCGACAGGCCATaGCCTGGAATTGTGGTGAAG +
Preference number: 3 (lower is better)
Translates to: SHPLSVDQIGNQPLVMHFCSDRP*PGIVVK
Trigger: CTTCACCACAATTCCAGGCAATGGCCTGTCGGAGCA...GAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp GCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACTTTGCAGTGGTAGAATaGTCTGCTCCGACAGGCCAT +
Preference number: 3 (lower is better)
Translates to: AGWISQSTFSRVGRITKNFAVVE*SAPTGH
Trigger: ATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAA...GTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp GTTACTTTAGGCCATCTGGATGTATACGTGCAAATCACAGGGGATGCGATGCTTTTTGCAGTGGTAGAATaGTCTGCTCCGACAGGCCAT +
Preference number: 3 (lower is better)
Translates to: VTLGHLDVYVQITGDAMLFAVVE*SAPTGH
Trigger: ATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAA...AAGCATCGCATCCCCTGTGATTTGCACGTATACATCCAGATGGCCTAAAGTAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp TGGGGAAGATTACAAAGTACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATTTGCTCCGACAGGCCATaGCCTGGAATTGTGGTGAAG +
Preference number: 3 (lower is better)
Translates to: WGRLQSTFLRVGEITKYICSDRP*PGIVVK
Trigger: CTTCACCACAATTCCAGGCAATGGCCTGTCGGAGCA...AATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTACTTTGTAATCTTCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp TGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTTGCTCCGACAGGCCATaGCCTGGAATTGTGGTGAAG +
Preference number: 3 (lower is better)
Translates to: WISQSTFSRVGRITKNLLCSDRP*PGIVVK
Trigger: CTTCACCACAATTCCAGGCAATGGCCTGTCGGAGCA...AAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp ACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCCAGGGGATGCGATGCTaGGCTTGGGCTCAGAGGCCT +
Preference number: 3 (lower is better)
Translates to: TMVECHQLRLFLLLLWIFQGMRC*AWAQRP
Trigger: AGGCCTCTGAGCCCAAGCCAAGCATCGCATCCCCTG...GAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp TCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCTTTGCAGTGGTAGAATaGTCTGCTCCGACAGGCCAT +
Preference number: 3 (lower is better)
Translates to: SHPLSVDQIGNQPLVMHFFAVVE*SAPTGH
Trigger: ATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAA...GAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp GTGGGGAAGATTACAAAGTACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATTCCACTAAGGTGACTTaGGCTCTTACCTGCTCTCTC +
Preference number: 3 (lower is better)
Translates to: VGKITKYLLKGGGDYKVHSTKVT*ALTCSL
Trigger: GAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGA...ATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTACTTTGTAATCTTCCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGTCAAATCAATCATCTaGGTTTCCAGGCTCTGGTTT +
Preference number: 3 (lower is better)
Translates to: VMHFFQILSGELTVTSWAVKSII*VSRLWF
Trigger: AAACCAGAGCCTGGAAACCAAGATGATTGATTTGAC...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR GCA 72 bp AAAATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTaGTCCGACAGGCCATTGCCTGGAATTGTGGTGAAG +
Preference number: 3 (lower is better)
Translates to: KMVTTLCSGRIV*SDRPLPGIVVK
Trigger: CTTCACCACAATTCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR CCA 72 bp GTGGGGGAGATTACAAAGTACATTGATCAGTTAGGGTaGGGCAGGAACAAATCACAATGGTGGAATGTCATC +
Preference number: 3 (lower is better)
Translates to: VGEITKYIDQLG*GRNKSQWWNVI
Trigger: GATGACATTCCACCATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATGTACTTTGTAATCTCCCCCAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp GTGGGGAAGATTACAAAGTACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATTCATCCCAAATCGAGTaGGTTACCCTGATACAACCG +
Preference number: 3 (lower is better)
Translates to: VGKITKYLLKGGGDYKVHSSQIE*VTLIQP
Trigger: CGGTTGTATCAGGGTAACCAACTCGATTTGGGATGA...ATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTACTTTGTAATCTTCCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR TCA 72 bp TACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATTaGTCAGTTAGGGTGGGGCAGGAACAAATCACAATG +
Preference number: 3 (lower is better)
Translates to: YLLKGGGDYKVH*SVRVGQEQITM
Trigger: CATTGTGATTTGTTCCTGCCCCACCCTAACTGATCAATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp AATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCAGTGCTCCGACAGGCCATaGCCTGGAATTGTGGTGAAG +
Preference number: 3 (lower is better)
Translates to: NGGMSSVKAIFTSFVDLQCSDRP*PGIVVK
Trigger: CTTCACCACAATTCCAGGCAATGGCCTGTCGGAGCA...CTGAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp TTACTTCTTTTGTGGATCTTCAGTTACTTTAGGCCATCTGGATGTATACGTGCATCCACTAAGGTGACTTaGGCTCTTACCTGCTCTCTC +
Preference number: 3 (lower is better)
Translates to: LLLLWIFSYFRPSGCIRASTKVT*ALTCSL
Trigger: GAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGA...TGCACGTATACATCCAGATGGCCTAAAGTAACTGAAGATCCACAAAAGAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp GTGGGGCAGGAACAAATCACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTATCATCCCAAATCGAGTaGGTTACCCTGATACAACCG +
Preference number: 3 (lower is better)
Translates to: VGQEQITMVECHQLRLFLSSQIE*VTLIQP
Trigger: CGGTTGTATCAGGGTAACCAACTCGATTTGGGATGA...TAAAAATAGCCTTAACTGATGACATTCCACCATTGTGATTTGTTCCTGCCCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR GCA 72 bp TTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCTaGTCTCTCACCCATTATCAGTTGATCAGATTGGGA +
Preference number: 3 (lower is better)
Translates to: FNLSTKVTLALT*SLTHYQLIRLG
Trigger: TCCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp AGATTCATCCCAAATCGAGTTGGTTACCCTGATACAACCGTTCATATAAAACTATTTGCAGTGGTAGAATaGTCTGCTCCGACAGGCCAT +
Preference number: 3 (lower is better)
Translates to: RFIPNRVGYPDTTVHIKLFAVVE*SAPTGH
Trigger: ATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAA...TAGTTTTATATGAACGGTTGTATCAGGGTAACCAACTCGATTTGGGATGAATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp TCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAACTCACCCATTATCAGTaGATCAGATTGGGAATCAAC +
Preference number: 3 (lower is better)
Translates to: SRVGRITKNLLKGGEDYKLTHYQ*IRLGIN
Trigger: GTTGATTCCCAATCTGATCAACTGATAATGGGTGAG...TTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp GTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGTGTGTTTCTTTCCACTaGTATACAATCCCATGTTTC +
Preference number: 3 (lower is better)
Translates to: VHSQGWGELQRTFLRVGKCVSFH*YTIPCF
Trigger: GAAACATGGGATTGTATACAAGTGGAAAGAAACACA...CTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482099.1
3UTR-3UTR CAA 90 bp ACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCTCCACTAAGGTGACTTaGGCTCTTACCTGCTCTCTC +
Preference number: 3 (lower is better)
Translates to: TMVECHQLRLFLLLLWIFSTKVT*ALTCSL
Trigger: GAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGA...GAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp AATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCAGTCCACTAAGGTGACTTaGGCTCTTACCTGCTCTCTC +
Preference number: 3 (lower is better)
Translates to: NGGMSSVKAIFTSFVDLQSTKVT*ALTCSL
Trigger: GAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGA...CTGAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR-3UTR CAA 90 bp GAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTTAAGTCATCCCAAATCGAGTaGGTTACCCTGATACAACCG +
Preference number: 3 (lower is better)
Translates to: ELQRTFLRVGKITKYLLKSSQIE*VTLIQP
Trigger: CGGTTGTATCAGGGTAACCAACTCGATTTGGGATGA...CTTAAGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
3UTR CCA 72 bp AAGTACATTGGCTCACCCTCATATGCACAATGCCATTaGAGATCTTCTCTACAAATAACAATAGGAGACAAG +
Preference number: 3 (lower is better)
Translates to: KYIGSPSYAQCH*RSSLQITIGDK
Trigger: CTTGTCTCCTATTGTTATTTGTAGAGAAGATCTCCAATGGCATTGTGCATATGAGGGTGAGCCAATGTACTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482099.1
3UTR TCA 72 bp TGCCCTAAGATTCATCCCAAATCGAGTTGGTTACCCTaGTACAACCGTTCATATAAAACTAGACTAAAATAC +
Preference number: 3 (lower is better)
Translates to: CPKIHPKSSWLP*YNRSYKTRLKY
Trigger: GTATTTTAGTCTAGTTTTATATGAACGGTTGTATCAGGGTAACCAACTCGATTTGGGATGAATCTTAGGGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAGGTGTCTGCTCCTCCTaGCTTCTAGCTGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VTTLCSGRIVCSDRPLPGGVCSS*LLAGLC
Trigger: GCAGAGCCCAGCTAGAAGCCAGGAGGAGCAGACACC...TCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp ATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGTGTCTGCTCCTCCTaGCTTCTAGCTGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: MVTTLCSGRIVCSDRPLPGVCSS*LLAGLC
Trigger: GCAGAGCCCAGCTAGAAGCCAGGAGGAGCAGACACC...AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GGCTCTTACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCAGGGGATGCGATGCTTaGCTTGGGCTCAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GSYLLSHPLSVDQIGNQPRGCDA*LGLRGL
Trigger: CAGGCCTCTGAGCCCAAGCCAAGCATCGCATCCCCT...GGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTAAGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTAGGGGATGCGATGCTTaGCTTGGGCTCAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: VMHFFQILSGELTVTSWARGCDA*LGLRGL
Trigger: CAGGCCTCTGAGCCCAAGCCAAGCATCGCATCCCCT...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GGTGACTTTGGCTCTTACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGTCACAGGGGATGCGATaGTTGGCTTGGGCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: GDFGSYLLSHPLSVDQIGSQGMR*LAWAQR
Trigger: CCTCTGAGCCCAAGCCAAGCATCGCATCCCCTGTGA...CCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTAAGAGCCAAAGTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp TGTTTTGTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATCATTATCGGGTGCACTaGGACAGCGCTCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: CFVGRVDLTKYILKGGENHYRVH*DSAHQE
Trigger: CTCCTGGTGAGCGCTGTCCCAGTGCACCCGATAATG...ATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCACAAAACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GGTTTCCAGGCTCTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCAGGGGATGCGATGCTTaGCTTGGGCTCAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: GFQALVFNLSTKVTLALTRGCDA*LGLRGL
Trigger: CAGGCCTCTGAGCCCAAGCCAAGCATCGCATCCCCT...GGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAGAGCCTGGAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp TACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGTTCGCCATTATCGGGTaGACTGGGACAGCGCTCACC +
Preference number: 4 (lower is better)
Translates to: YLLSHPLSVDQIGNQPLVFAIIG*TGTALT
Trigger: GGTGAGCGCTGTCCCAGTGCACCCGATAATGGCGAA...CACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp ATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGACTGTAACAGAAATGTAGGTGTCTGCTCCTCCTaGCTTCTAGCTGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: ILSGELTVTSWADCNRNVGVCSS*LLAGLC
Trigger: GCAGAGCCCAGCTAGAAGCCAGGAGGAGCAGACACC...TACATTTCTGTTACAGTCAGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GTGAAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGGGTGTCTGCTCCTCCTaGCTTCTAGCTGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: VKKGEMKSLDIKDAGHELGVCSS*LLAGLC
Trigger: GCAGAGCCCAGCTAGAAGCCAGGAGGAGCAGACACC...CAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp TCTTCAGTTACTTTAGGCCATCTGGATGTATACGTGCAAATCACAGGGGATGCGCATTATCGGGTGCACTaGGACAGCGCTCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: SSVTLGHLDVYVQITGDAHYRVH*DSAHQE
Trigger: CTCCTGGTGAGCGCTGTCCCAGTGCACCCGATAATG...CGCATCCCCTGTGATTTGCACGTATACATCCAGATGGCCTAAAGTAACTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp TTATTTCACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAGAGTCAGCGAAGGGTGAAGGCTTACTCTTCTaGAAAATAGCGACGCATTCC +
Preference number: 4 (lower is better)
Translates to: LFHLGAGGLSPKRESAKGEGLLF*KIATHS
Trigger: GGAATGCGTCGCTATTTTTCAGAAGAGTAAGCCTTC...ACCCTTCGCTGACTCTCTTTTCGGACTCAGCCCACCTGCACCCAGGTGAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp CTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAATTGTGGTGACCTTTCCACTAAGGTaGCTTTGGCTCTTACCTGCT +
Preference number: 4 (lower is better)
Translates to: LCSGRIVCSDRPLPGIVVTFPLR*LWLLPA
Trigger: AGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGT...CACCACAATTCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp TTATTTCACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAGAGTCAGCGAAGGGTCTTTCAAATCAGCCTTaGGATGTACCACAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: LFHLGAGGLSPKRESAKGLSNQP*DVPQGH
Trigger: ATGCCCTTGTGGTACATCTCAAGGCTGATTTGAAAG...ACCCTTCGCTGACTCTCTTTTCGGACTCAGCCCACCTGCACCCAGGTGAAATAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467761.5
ENST00000619531.4
CDS-3UTR GCA 90 bp GTGAAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTTCGCCATTATCGGGTaGACTGGGACAGCGCTCACC +
Preference number: 4 (lower is better)
Translates to: VKKGEMKSLDIKDAGHELFAIIG*TGTALT
Trigger: GGTGAGCGCTGTCCCAGTGCACCCGATAATGGCGAA...CAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAAGTGGTAGAATTGTCTaGTCCGACAGGCCATTGCCT +
Preference number: 4 (lower is better)
Translates to: VTTLCSGRIVCSDRPLPGSGRIV*SDRPLP
Trigger: AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACT...TCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp AAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGTCACAGGGGATGCGATaGTTGGCTTGGGCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: KGEMKSLDIKDAGHELSQSQGMR*LAWAQR
Trigger: CCTCTGAGCCCAAGCCAAGCATCGCATCCCCTGTGA...CTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp ACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAATTGTGTTTATTTCACCTGGGTaGAGGTGGGCTGAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: TLCSGRIVCSDRPLPGIVFISPG*RWAESE
Trigger: TTCGGACTCAGCCCACCTGCACCCAGGTGAAATAAA...CACAATTCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGTCTTCTAGGGGATGCGATGCTTaGCTTGGGCTCAGAGGCCTG +
Preference number: 4 (lower is better)
Translates to: EMKSLDIKDAGHELSQSSRGCDA*LGLRGL
Trigger: CAGGCCTCTGAGCCCAAGCCAAGCATCGCATCCCCT...AGAAGACTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp CTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAATTGTGGTGGTCATGCAGAGGAGGTaGGTTCTAGGCTTTAGTATA +
Preference number: 4 (lower is better)
Translates to: LCSGRIVCSDRPLPGIVVVMQRR*VLGFSI
Trigger: TATACTAAAGCCTAGAACGCACCTCCTCTGCATGAC...CACCACAATTCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp CTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAATTGTGGTGCGCCCTGTCCATGTTTaGTTCAGCAGTGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: LCSGRIVCSDRPLPGIVVRPVHV*FSSEFS
Trigger: TGAAAATTCACTGCTGAAGCAAACATGGACAGGGCG...CACCACAATTCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp ACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAATTGTGTGGCTCGGTTCTACATaGACTGTGTGGATGGTAAGT +
Preference number: 4 (lower is better)
Translates to: TLCSGRIVCSDRPLPGIVWLGST*TVWMVS
Trigger: ACTTACCATCCACACAGTGCATGTAGAACCGAGCCA...CACAATTCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAAATCAGCAGAAAAGCTaGCAAAATCGCAGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: VTTLCSGRIVCSDRPLPGNQQKS*QNRRGH
Trigger: GTGCCCTCTGCGATTTTGGCAGCTTTTCTGCTGATT...TCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp ACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAATTGTGAATCAGCAGAAAAGCTaGCAAAATCGCAGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: TLCSGRIVCSDRPLPGIVNQQKS*QNRRGH
Trigger: GTGCCCTCTGCGATTTTGGCAGCTTTTCTGCTGATT...CACAATTCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp AAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCATTCGCCATTATCGGGTaGACTGGGACAGCGCTCACC +
Preference number: 4 (lower is better)
Translates to: KKGEMKSLDIKDAGHELSFAIIG*TGTALT
Trigger: GGTGAGCGCTGTCCCAGTGCACCCGATAATGGCGAA...TGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp ATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTAGTGGTAGAATTGTCTaGTCCGACAGGCCATTGCCT +
Preference number: 4 (lower is better)
Translates to: MVTTLCSGRIVCSDRPLPSGRIV*SDRPLP
Trigger: AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACT...AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp TCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCTCACAGGGGATGCGATaGTTGGCTTGGGCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: SHPLSVDQIGNQPLVMHFSQGMR*LAWAQR
Trigger: CCTCTGAGCCCAAGCCAAGCATCGCATCCCCTGTGA...GAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAATTTATTTCACCTGGGTaGAGGTGGGCTGAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: VGRVDLTKYILKGGENYKFISPG*RWAESE
Trigger: TTCGGACTCAGCCCACCTGCACCCAGGTGAAATAAA...TTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp TTTGTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACCTCCTGGCTTCTAGCTaGGCTCTGCAACATTTTACG +
Preference number: 4 (lower is better)
Translates to: FVGRVDLTKYILKGGENYLLASS*ALQHFT
Trigger: CGTAAAATGTTGCAGAGCCCAGCTAGAAGCCAGGAG...GTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp TTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGACTGTAACAGACTCCTGGCTTCTAGCTaGGCTCTGCAACATTTTACG +
Preference number: 4 (lower is better)
Translates to: FQILSGELTVTSWADCNRLLASS*ALQHFT
Trigger: CGTAAAATGTTGCAGAGCCCAGCTAGAAGCCAGGAG...TCTGTTACAGTCAGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTGGTGTCTGCTCCTCCTaGCTTCTAGCTGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GRITKNLLKGGEDYKVPSGVCSS*LLAGLC
Trigger: GCAGAGCCCAGCTAGAAGCCAGGAGGAGCAGACACC...AGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp ATCCAGGCATTTATACTCAATGCAGGTAGTGGGTCAGTGAATGATGTCTTGAAAGGTGTCTGCTCCTCCTaGCTTCTAGCTGGGCTCTGC +
Preference number: 4 (lower is better)
Translates to: IQAFILNAGSGSVNDVLKGVCSS*LLAGLC
Trigger: GCAGAGCCCAGCTAGAAGCCAGGAGGAGCAGACACC...TTTCAAGACATCATTCACTGACCCACTACCTGCATTGAGTATAAATGCCTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTCGACAGGCCATTGCCTaGAATTGTGGTGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: VMHFFQILSGELTVTSWARQAIA*NCGEER
Trigger: CCTTTCTTCACCACAATTCCAGGCAATGGCCTGTCG...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp ATCCAGGCATTTATACTCAATGCAGGTAGTGGGTCAGTGAATGATGTCTTGAAACCTGCCTCAGCCTCCTaGGTAGCTGGAAGGAGAGTA +
Preference number: 4 (lower is better)
Translates to: IQAFILNAGSGSVNDVLKPASAS*VAGRRV
Trigger: TACTCTCCTTCCAGCTACTCAGGAGGCTGAGGCAGG...TTTCAAGACATCATTCACTGACCCACTACCTGCATTGAGTATAAATGCCTGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357759.9
CDS-3UTR GCA 90 bp GTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAGTCATGCAGAGGAGGTaGGTTCTAGGCTTTAGTATA +
Preference number: 4 (lower is better)
Translates to: VTTLCSGRIVCSDRPLPGVMQRR*VLGFSI
Trigger: TATACTAAAGCCTAGAACGCACCTCCTCTGCATGAC...TCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp ACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAATTGTGCTTCTAGCTGGGCTCTaGAACATTTTACGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: TLCSGRIVCSDRPLPGIVLLAGL*NILRSK
Trigger: TTTGGAGCGTAAAATGTTGCAGAGCCCAGCTAGAAG...CACAATTCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp AATAAGTACATTGGCTCACCCTCATATGCACAATGCCATTGGAGATCTTCTCTATTCGCCATTATCGGGTaGACTGGGACAGCGCTCACC +
Preference number: 4 (lower is better)
Translates to: NKYIGSPSYAQCHWRSSLFAIIG*TGTALT
Trigger: GGTGAGCGCTGTCCCAGTGCACCCGATAATGGCGAA...TAGAGAAGATCTCCAATGGCATTGTGCATATGAGGGTGAGCCAATGTACTTATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482099.1
CDS-3UTR GCA 90 bp GTTACTTTAGGCCATCTGGATGTATACGTGCAAATCACAGGGGATGCGATGCTTAGTGGTAGAATTGTCTaGTCCGACAGGCCATTGCCT +
Preference number: 4 (lower is better)
Translates to: VTLGHLDVYVQITGDAMLSGRIV*SDRPLP
Trigger: AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACT...AAGCATCGCATCCCCTGTGATTTGCACGTATACATCCAGATGGCCTAAAGTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp CAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGACTGTAACAGAAATTTTATTTCACCTGGGTaGAGGTGGGCTGAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: QILSGELTVTSWADCNRNFISPG*RWAESE
Trigger: TTCGGACTCAGCCCACCTGCACCCAGGTGAAATAAA...ATTTCTGTTACAGTCAGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp TACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGTTTATTTCACCTGGGTaGAGGTGGGCTGAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: YLLSHPLSVDQIGNQPLVFISPG*RWAESE
Trigger: TTCGGACTCAGCCCACCTGCACCCAGGTGAAATAAA...CACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp CTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCTGCTCTCTCACCTTTATTTCACCTGGGTaGAGGTGGGCTGAGTCCGAA +
Preference number: 4 (lower is better)
Translates to: LVFNLSTKVTLALTCSLTFISPG*RWAESE
Trigger: TTCGGACTCAGCCCACCTGCACCCAGGTGAAATAAA...GGTGAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp ACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAATTGTGCGTGCTATATTATCCTaGAACCCCTGCTGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: TLCSGRIVCSDRPLPGIVRAILS*NPCCCF
Trigger: AAAACAGCAGCAGGGGTTGCAGGATAATATAGCACG...CACAATTCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482099.1
CDS-3UTR CCA 90 bp GGCTCTTACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCAACATCTTTCTTGTTaGGCTCCATCAGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: GSYLLSHPLSVDQIGNQPQHLSC*APSAGC
Trigger: ACACCCTGCTGATGGAGCCCAACAAGAAAGATGTTG...GGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTAAGAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp AGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGTCTTCTCTCATTTCATTATCGGGTGCACTaGGACAGCGCTCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: SHWILRMQVMSCHSLLSFHYRVH*DSAHQE
Trigger: CTCCTGGTGAGCGCTGTCCCAGTGCACCCGATAATG...AAATGAGAGAAGACTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp TCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCATGCGATGCTTGGCTTaGGCTCAGAGGCCTGACACA +
Preference number: 4 (lower is better)
Translates to: SHPLSVDQIGNQPLVMHFMRCLA*AQRPDT
Trigger: TGTGTCAGGCCTCTGAGCCCAAGCCAAGCATCGCAT...GAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp TTTGTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACGAAGGCTTACTCTTCTaGAAAATAGCGACGCATTCC +
Preference number: 4 (lower is better)
Translates to: FVGRVDLTKYILKGGENYEGLLF*KIATHS
Trigger: GGAATGCGTCGCTATTTTTCAGAAGAGTAAGCCTTC...GTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp TTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGACTGTAACAGAGAAGGCTTACTCTTCTaGAAAATAGCGACGCATTCC +
Preference number: 4 (lower is better)
Translates to: FQILSGELTVTSWADCNREGLLF*KIATHS
Trigger: GGAATGCGTCGCTATTTTTCAGAAGAGTAAGCCTTC...TCTGTTACAGTCAGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp ACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAATTGTGCCCAAATCCAATTCTTaGTGGTCTCTCAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: TLCSGRIVCSDRPLPGIVPKSNS*WSLKLS
Trigger: TGAAAGCTTGAGAGACCATCAAGAATTGGATTTGGG...CACAATTCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467562.5
ENST00000467761.5
ENST00000619531.4
CDS-3UTR GCA 90 bp GCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACGAGGAAGAAAGACAGTaGTGTCTGTGCCTTCATGTC +
Preference number: 4 (lower is better)
Translates to: AGWISQSTFSRVGRITKNEEERQ*CLCLHV
Trigger: GACATGAAGGCACAGACAGCACTGTCTTTCTTCCTC...GTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp ATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTAAGCCAAAGGGAATATaGCTTGAGATCCACTCAGAG +
Preference number: 4 (lower is better)
Translates to: MVTTLCSGRIVCSDRPLPKPKGI*LEIHSE
Trigger: CTCTGAGTGGATCTCAAGGCATATTCCCTTTGGCTT...AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp ATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTCGCCCTGTCCATGTTTaGTTCAGCAGTGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: MVTTLCSGRIVCSDRPLPRPVHV*FSSEFS
Trigger: TGAAAATTCACTGCTGAAGCAAACATGGACAGGGCG...AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTCGCCCTGTCCATGTTTaGTTCAGCAGTGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: VMHFFQILSGELTVTSWARPVHV*FSSEFS
Trigger: TGAAAATTCACTGCTGAAGCAAACATGGACAGGGCG...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp CAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGACTGTAACAGAAATAATCAGCAGAAAAGCTaGCAAAATCGCAGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: QILSGELTVTSWADCNRNNQQKS*QNRRGH
Trigger: GTGCCCTCTGCGATTTTGGCAGCTTTTCTGCTGATT...ATTTCTGTTACAGTCAGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GTTACTTTAGGCCATCTGGATGTATACGTGCAAATCACAGGGGATGCGATGCTTAATCAGCAGAAAAGCTaGCAAAATCGCAGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: VTLGHLDVYVQITGDAMLNQQKS*QNRRGH
Trigger: GTGCCCTCTGCGATTTTGGCAGCTTTTCTGCTGATT...AAGCATCGCATCCCCTGTGATTTGCACGTATACATCCAGATGGCCTAAAGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp TTTGTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACCTTCTAGCTGGGCTCTaGAACATTTTACGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: FVGRVDLTKYILKGGENYLLAGL*NILRSK
Trigger: TTTGGAGCGTAAAATGTTGCAGAGCCCAGCTAGAAG...GTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp ATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGACTGTAACAGAAATGTAAGTGGTAGAATTGTCTaGTCCGACAGGCCATTGCCT +
Preference number: 4 (lower is better)
Translates to: ILSGELTVTSWADCNRNVSGRIV*SDRPLP
Trigger: AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACT...TACATTTCTGTTACAGTCAGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp ATACCTTGTCAAATCAATCATCTTGGTTTCCAGGCTCTGGTTTTTAACCTTTCCTCACAGGGGATGCGATaGTTGGCTTGGGCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: IPCQINHLGFQALVFNLSSQGMR*LAWAQR
Trigger: CCTCTGAGCCCAAGCCAAGCATCGCATCCCCTGTGA...GGAAAGGTTAAAAACCAGAGCCTGGAAACCAAGATGATTGATTTGACAAGGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GTTACTTTAGGCCATCTGGATGTATACGTGCAAATCACAGGGGATGCGATGCTTTGGGAAGCTGTTTCTTaGCTCGGTTCTACATGCACT +
Preference number: 4 (lower is better)
Translates to: VTLGHLDVYVQITGDAMLWEAVS*LGSTCT
Trigger: AGTGCATGTAGAACCGAGCCAAGAAACAGCTTCCCA...AAGCATCGCATCCCCTGTGATTTGCACGTATACATCCAGATGGCCTAAAGTAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp AAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGCTCCTGGCTTCTAGCTaGGCTCTGCAACATTTTACG +
Preference number: 4 (lower is better)
Translates to: KGEMKSLDIKDAGHELSQLLASS*ALQHFT
Trigger: CGTAAAATGTTGCAGAGCCCAGCTAGAAGCCAGGAG...CTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp CTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCTGCTCTCTCACCCAACATCTTTCTTGTTaGGCTCCATCAGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LVFNLSTKVTLALTCSLTQHLSC*APSAGC
Trigger: ACACCCTGCTGATGGAGCCCAACAAGAAAGATGTTG...GGTGAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp TTACTTCTTTTGTGGATCTTCAGTTACTTTAGGCCATCTGGATGTATACGTGCACATTATCGGGTGCACTaGGACAGCGCTCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: LLLLWIFSYFRPSGCIRAHYRVH*DSAHQE
Trigger: CTCCTGGTGAGCGCTGTCCCAGTGCACCCGATAATG...TGCACGTATACATCCAGATGGCCTAAAGTAACTGAAGATCCACAAAAGAAGTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp AAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGCGACAGGCCATTGCCTaGAATTGTGGTGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: KGEMKSLDIKDAGHELSQRQAIA*NCGEER
Trigger: CCTTTCTTCACCACAATTCCAGGCAATGGCCTGTCG...CTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp TGTTTTGTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATCTCACTGTAACCTCCTaGGCTGACTGTAACAGAAAT +
Preference number: 4 (lower is better)
Translates to: CFVGRVDLTKYILKGGENLTVTS*ADCNRN
Trigger: ATTTCTGTTACAGTCAGCCCAGGAGGTTACAGTGAG...ATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCACAAAACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTCTCACTGTAACCTCCTaGGCTGACTGTAACAGAAAT +
Preference number: 4 (lower is better)
Translates to: VMHFFQILSGELTVTSWALTVTS*ADCNRN
Trigger: ATTTCTGTTACAGTCAGCCCAGGAGGTTACAGTGAG...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp ATCCAGGCATTTATACTCAATGCAGGTAGTGGGTCAGTGAATGATGTCTTGAAAATGCGATGCTTGGCTTaGGCTCAGAGGCCTGACACA +
Preference number: 4 (lower is better)
Translates to: IQAFILNAGSGSVNDVLKMRCLA*AQRPDT
Trigger: TGTGTCAGGCCTCTGAGCCCAAGCCAAGCATCGCAT...TTTCAAGACATCATTCACTGACCCACTACCTGCATTGAGTATAAATGCCTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp TGGGGAAGATTACAAAGTACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATTATGCGATGCTTGGCTTaGGCTCAGAGGCCTGACACA +
Preference number: 4 (lower is better)
Translates to: WGRLQSTFLRVGEITKYIMRCLA*AQRPDT
Trigger: TGTGTCAGGCCTCTGAGCCCAAGCCAAGCATCGCAT...AATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTACTTTGTAATCTTCCCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTAAGAGCAATGTTTTGTaGGCAGGGTGGATCTCACAA +
Preference number: 4 (lower is better)
Translates to: VMHFFQILSGELTVTSWAKSNVL*AGWISQ
Trigger: TTGTGAGATCCACCCTGCCCACAAAACATTGCTCTT...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp TTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGACTGTAACAGAAAGAGCAATGTTTTGTaGGCAGGGTGGATCTCACAA +
Preference number: 4 (lower is better)
Translates to: FQILSGELTVTSWADCNRKSNVL*AGWISQ
Trigger: TTGTGAGATCCACCCTGCCCACAAAACATTGCTCTT...TCTGTTACAGTCAGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp GGTGACTTTGGCTCTTACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGGGATCCCCTCTCAAATaGAGAAGGGAGAATTATATC +
Preference number: 4 (lower is better)
Translates to: GDFGSYLLSHPLSVDQIGGSPLK*RRENYI
Trigger: GATATAATTCTCCCTTCTTCATTTGAGAGGGGATCC...CCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTAAGAGCCAAAGTCACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGGATCCCCTCTCAAATaGAGAAGGGAGAATTATATC +
Preference number: 4 (lower is better)
Translates to: VMHFFQILSGELTVTSWAGSPLK*RRENYI
Trigger: GATATAATTCTCCCTTCTTCATTTGAGAGGGGATCC...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp GCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACACTTCATCACGGGTGTaGGAAAAACTCCCACCTTTA +
Preference number: 4 (lower is better)
Translates to: AGWISQSTFSRVGRITKNTSSRV*EKLPPL
Trigger: TAAAGGTGGGAGTTTTTCTCACACCCGTGATGAAGT...GTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp GTTACTTTAGGCCATCTGGATGTATACGTGCAAATCACAGGGGATGCGATGCTTACTTCATCACGGGTGTaGGAAAAACTCCCACCTTTA +
Preference number: 4 (lower is better)
Translates to: VTLGHLDVYVQITGDAMLTSSRV*EKLPPL
Trigger: TAAAGGTGGGAGTTTTTCTCACACCCGTGATGAAGT...AAGCATCGCATCCCCTGTGATTTGCACGTATACATCCAGATGGCCTAAAGTAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp GTGAAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGACCTTTCCACTAAGGTaGCTTTGGCTCTTACCTGCT +
Preference number: 4 (lower is better)
Translates to: VKKGEMKSLDIKDAGHELTFPLR*LWLLPA
Trigger: AGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGT...CAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp ATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTAAGGCTTACTCTTCTTaGGATCCACTCAGAGATGTT +
Preference number: 4 (lower is better)
Translates to: MVTTLCSGRIVCSDRPLPKAYSS*DPLRDV
Trigger: AACATCTCTGAGTGGATCTCAAGAAGAGTAAGCCTT...AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467562.5
CDS-3UTR GCA 90 bp GTTACTTTAGGCCATCTGGATGTATACGTGCAAATCACAGGGGATGCGATGCTTGTCATGCAGAGGAGGTaGGTTCTAGGCTTTAGTATA +
Preference number: 4 (lower is better)
Translates to: VTLGHLDVYVQITGDAMLVMQRR*VLGFSI
Trigger: TATACTAAAGCCTAGAACGCACCTCCTCTGCATGAC...AAGCATCGCATCCCCTGTGATTTGCACGTATACATCCAGATGGCCTAAAGTAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357759.9
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp AAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGGAGGAAGAAAGACAGTaGTGTCTGTGCCTTCATGTC +
Preference number: 4 (lower is better)
Translates to: KGEMKSLDIKDAGHELSQEEERQ*CLCLHV
Trigger: GACATGAAGGCACAGACAGCACTGTCTTTCTTCCTC...CTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp CTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCTGCTCTCTCACCAAGCCAAAGGGAATATaGCTTGAGATCCACTCAGAG +
Preference number: 4 (lower is better)
Translates to: LVFNLSTKVTLALTCSLTKPKGI*LEIHSE
Trigger: CTCTGAGTGGATCTCAAGGCATATTCCCTTTGGCTT...GGTGAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp TACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGAAGGGATGTCCTGTTTaGATATCTGGGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: YLLSHPLSVDQIGNQPLVKGCPV*ISGILA
Trigger: AGCCAAGATCCCAGATATGCAAACAGGACATCCCTT...CACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp AAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGTGGCTCGGTTCTACATaGACTGTGTGGATGGTAAGT +
Preference number: 4 (lower is better)
Translates to: KGEMKSLDIKDAGHELSQWLGST*TVWMVS
Trigger: ACTTACCATCCACACAGTGCATGTAGAACCGAGCCA...CTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GGTTTCCAGGCTCTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCCTTCTAGCTGGGCTCTaGAACATTTTACGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: GFQALVFNLSTKVTLALTLLAGL*NILRSK
Trigger: TTTGGAGCGTAAAATGTTGCAGAGCCCAGCTAGAAG...GGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAGAGCCTGGAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp AGATTCATCCCAAATCGAGTTGGTTACCCTGATACAACCGTTCATATAAAACTATTCGCCATTATCGGGTaGACTGGGACAGCGCTCACC +
Preference number: 4 (lower is better)
Translates to: RFIPNRVGYPDTTVHIKLFAIIG*TGTALT
Trigger: GGTGAGCGCTGTCCCAGTGCACCCGATAATGGCGAA...TAGTTTTATATGAACGGTTGTATCAGGGTAACCAACTCGATTTGGGATGAATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp CTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCTGCTCTCTCACCGCATATCTGGGATCTTaGCTTTCCAAATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: LVFNLSTKVTLALTCSLTAYLGS*LSKWSL
Trigger: CAGTGACCATTTGGAAAGCCAAGATCCCAGATATGC...GGTGAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp TACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGGCATATCTGGGATCTTaGCTTTCCAAATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: YLLSHPLSVDQIGNQPLVAYLGS*LSKWSL
Trigger: CAGTGACCATTTGGAAAGCCAAGATCCCAGATATGC...CACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp TCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCCTCCTGGCTTCTAGCTaGGCTCTGCAACATTTTACG +
Preference number: 4 (lower is better)
Translates to: SHPLSVDQIGNQPLVMHFLLASS*ALQHFT
Trigger: CGTAAAATGTTGCAGAGCCCAGCTAGAAGCCAGGAG...GAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp AACATCCAGGCATTTATACTCAATGCAGGTAGTGGGTCAGTGAATGATGTCTTGCTCCTGGCTTCTAGCTaGGCTCTGCAACATTTTACG +
Preference number: 4 (lower is better)
Translates to: NIQAFILNAGSGSVNDVLLLASS*ALQHFT
Trigger: CGTAAAATGTTGCAGAGCCCAGCTAGAAGCCAGGAG...CAAGACATCATTCACTGACCCACTACCTGCATTGAGTATAAATGCCTGGATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp AGAAAATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATCAACATCTTTCTTGTTaGGCTCCATCAGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: RKWLQLFAVVELSAPTGHQHLSC*APSAGC
Trigger: ACACCCTGCTGATGGAGCCCAACAAGAAAGATGTTG...ATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCATTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTTAAGCATTATCGGGTGCACTaGGACAGCGCTCACCAGGAG +
Preference number: 4 (lower is better)
Translates to: ELQRTFLRVGKITKYLLKHYRVH*DSAHQE
Trigger: CTCCTGGTGAGCGCTGTCCCAGTGCACCCGATAATG...CTTAAGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp AACATCCAGGCATTTATACTCAATGCAGGTAGTGGGTCAGTGAATGATGTCTTGCGACAGGCCATTGCCTaGAATTGTGGTGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: NIQAFILNAGSGSVNDVLRQAIA*NCGEER
Trigger: CCTTTCTTCACCACAATTCCAGGCAATGGCCTGTCG...CAAGACATCATTCACTGACCCACTACCTGCATTGAGTATAAATGCCTGGATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp TCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCCGACAGGCCATTGCCTaGAATTGTGGTGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: SHPLSVDQIGNQPLVMHFRQAIA*NCGEER
Trigger: CCTTTCTTCACCACAATTCCAGGCAATGGCCTGTCG...GAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp CTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCTGCTCTCTCACCCTCACTGTAACCTCCTaGGCTGACTGTAACAGAAAT +
Preference number: 4 (lower is better)
Translates to: LVFNLSTKVTLALTCSLTLTVTS*ADCNRN
Trigger: ATTTCTGTTACAGTCAGCCCAGGAGGTTACAGTGAG...GGTGAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGTACATTCTCAAGGGTaGGGAGAATTACAAAGAACC +
Preference number: 4 (lower is better)
Translates to: VGRVDLTKYILKGGENYKVHSQG*GELQRT
Trigger: GGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTAC...TTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp TGTTTTGTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATGTACATTCTCAAGGGTaGGGAGAATTACAAAGAACC +
Preference number: 4 (lower is better)
Translates to: CFVGRVDLTKYILKGGENVHSQG*GELQRT
Trigger: GGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTAC...ATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCACAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp ACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAATTGTGTTGAATTGGGGAAAATaGAGTGTTCCCAACTTGAAT +
Preference number: 4 (lower is better)
Translates to: TLCSGRIVCSDRPLPGIVLNWGK*SVPNLN
Trigger: ATTCAAGTTGGGAACACTTCATTTTCCCCAATTCAA...CACAATTCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357759.9
CDS-3UTR TCA 90 bp GGTTTCCAGGCTCTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCGGATCCCCTCTCAAATaGAGAAGGGAGAATTATATC +
Preference number: 4 (lower is better)
Translates to: GFQALVFNLSTKVTLALTGSPLK*RRENYI
Trigger: GATATAATTCTCCCTTCTTCATTTGAGAGGGGATCC...GGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAGAGCCTGGAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp AAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGACTTCATCACGGGTGTaGGAAAAACTCCCACCTTTA +
Preference number: 4 (lower is better)
Translates to: KGEMKSLDIKDAGHELSQTSSRV*EKLPPL
Trigger: TAAAGGTGGGAGTTTTTCTCACACCCGTGATGAAGT...CTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp TTTGTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACTCACTTTGCATTTTATaGAGGCCATCTTTCATCGTC +
Preference number: 4 (lower is better)
Translates to: FVGRVDLTKYILKGGENYSLCIL*RPSFIV
Trigger: GACGATGAAAGATGGCCTTCATAAAATGCAAAGTGA...GTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp ATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTTCACTTTGCATTTTATaGAGGCCATCTTTCATCGTC +
Preference number: 4 (lower is better)
Translates to: MVTTLCSGRIVCSDRPLPSLCIL*RPSFIV
Trigger: GACGATGAAAGATGGCCTTCATAAAATGCAAAGTGA...AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp CAGAAAATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCACAGCTCTTTGTTCCATaGGAATCGGGATTCATTGAT +
Preference number: 4 (lower is better)
Translates to: QKMVTTLCSGRIVCSDRPQLFVP*ESGFID
Trigger: ATCAATGAATCCCGATTCTCATGGAACAAAGAGCTG...TGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCATTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp GTTACTTTAGGCCATCTGGATGTATACGTGCAAATCACAGGGGATGCGATGCTTTCACCCATTATCAGTTaGTCAGATTGGGAATCAACC +
Preference number: 4 (lower is better)
Translates to: VTLGHLDVYVQITGDAMLSPIIS*SDWEST
Trigger: GGTTGATTCCCAATCTGATCAACTGATAATGGGTGA...AAGCATCGCATCCCCTGTGATTTGCACGTATACATCCAGATGGCCTAAAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp TTTGTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACTCGAGTTGGTTACCCTaGTACAACCGTTCATATAAA +
Preference number: 4 (lower is better)
Translates to: FVGRVDLTKYILKGGENYSSWLP*YNRSYK
Trigger: TTTATATGAACGGTTGTATCAGGGTAACCAACTCGA...GTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp GTGAAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGCTTTCAAATCAGCCTTaGGATGTACCACAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: VKKGEMKSLDIKDAGHELLSNQP*DVPQGH
Trigger: ATGCCCTTGTGGTACATCTCAAGGCTGATTTGAAAG...CAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467562.5
ENST00000467761.5
ENST00000619531.4
CDS-3UTR TCA 90 bp GTTACTTTAGGCCATCTGGATGTATACGTGCAAATCACAGGGGATGCGATGCTTCCCAAATCCAATTCTTaGTGGTCTCTCAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: VTLGHLDVYVQITGDAMLPKSNS*WSLKLS
Trigger: TGAAAGCTTGAGAGACCATCAAGAATTGGATTTGGG...AAGCATCGCATCCCCTGTGATTTGCACGTATACATCCAGATGGCCTAAAGTAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467761.5
ENST00000619531.4
CDS-3UTR GCA 90 bp AACATCCAGGCATTTATACTCAATGCAGGTAGTGGGTCAGTGAATGATGTCTTGGAGGAAGAAAGACAGTaGTGTCTGTGCCTTCATGTC +
Preference number: 4 (lower is better)
Translates to: NIQAFILNAGSGSVNDVLEEERQ*CLCLHV
Trigger: GACATGAAGGCACAGACAGCACTGTCTTTCTTCCTC...CAAGACATCATTCACTGACCCACTACCTGCATTGAGTATAAATGCCTGGATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp TCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGAGGAAGAAAGACAGTaGTGTCTGTGCCTTCATGTC +
Preference number: 4 (lower is better)
Translates to: SRVGRITKNLLKGGEDYKEEERQ*CLCLHV
Trigger: GACATGAAGGCACAGACAGCACTGTCTTTCTTCCTC...TTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp ATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGACTGTAACAGAAATGTAAAGGGATGTCCTGTTTaGATATCTGGGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: ILSGELTVTSWADCNRNVKGCPV*ISGILA
Trigger: AGCCAAGATCCCAGATATGCAAACAGGACATCCCTT...TACATTTCTGTTACAGTCAGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGATGTAATCACTTGAATTaGTGTTCCTACATAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VTTLCSGRIVCSDRPLPGCNHLN*CSYIAG
Trigger: ACCTGCTATGTAGGAACAGCAATTCAAGTGATTACA...TCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp CTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAATTGTGGTGAAACACTTAACACGCTaGATATTAAGAAGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: LCSGRIVCSDRPLPGIVVKHLTR*ILRSCL
Trigger: CAAACAGCTTCTTAATATGCAGCGTGTTAAGTGTTT...CACCACAATTCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp AAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCATGGCTCGGTTCTACATaGACTGTGTGGATGGTAAGT +
Preference number: 4 (lower is better)
Translates to: KKGEMKSLDIKDAGHELSWLGST*TVWMVS
Trigger: ACTTACCATCCACACAGTGCATGTAGAACCGAGCCA...TGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGTCTTCTTGGCTCGGTTCTACATaGACTGTGTGGATGGTAAGT +
Preference number: 4 (lower is better)
Translates to: EMKSLDIKDAGHELSQSSWLGST*TVWMVS
Trigger: ACTTACCATCCACACAGTGCATGTAGAACCGAGCCA...AGAAGACTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTC
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GTGAAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGCTTCTAGCTGGGCTCTaGAACATTTTACGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: VKKGEMKSLDIKDAGHELLLAGL*NILRSK
Trigger: TTTGGAGCGTAAAATGTTGCAGAGCCCAGCTAGAAG...CAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp TGGGGAAGATTACAAAGTACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATTAGTGGTAGAATTGTCTaGTCCGACAGGCCATTGCCT +
Preference number: 4 (lower is better)
Translates to: WGRLQSTFLRVGEITKYISGRIV*SDRPLP
Trigger: AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACT...AATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTACTTTGTAATCTTCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp AGAAAATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATACTTTGGCTCTTACCTaGTCTCTCACCCATTATCAG +
Preference number: 4 (lower is better)
Translates to: RKWLQLFAVVELSAPTGHTLALT*SLTHYQ
Trigger: CTGATAATGGGTGAGAGAGCAGGTAAGAGCCAAAGT...ATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCATTTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTTGTCTTAGTCTTTGGTaGCCTAAGATTCATCCCAAA +
Preference number: 4 (lower is better)
Translates to: VMHFFQILSGELTVTSWACLSLW*PKIHPK
Trigger: TTTGGGATGAATCTTAGGGCACCAAAGACTAAGACA...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp TTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGACTGTAACAGATGTCTTAGTCTTTGGTaGCCTAAGATTCATCCCAAA +
Preference number: 4 (lower is better)
Translates to: FQILSGELTVTSWADCNRCLSLW*PKIHPK
Trigger: TTTGGGATGAATCTTAGGGCACCAAAGACTAAGACA...TCTGTTACAGTCAGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp AAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCATGGCTCACCCTCATATaGACAATGCCATTGGAGATC +
Preference number: 4 (lower is better)
Translates to: KKGEMKSLDIKDAGHELSWLTLI*TMPLEI
Trigger: GATCTCCAATGGCATTGTGCATATGAGGGTGAGCCA...TGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482099.1
CDS-3UTR CCA 90 bp AAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCATGGGAAGCTGTTTCTTaGCTCGGTTCTACATGCACT +
Preference number: 4 (lower is better)
Translates to: KKGEMKSLDIKDAGHELSWEAVS*LGSTCT
Trigger: AGTGCATGTAGAACCGAGCCAAGAAACAGCTTCCCA...TGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp TGGGGAAGATTACAAAGTACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATTCTCCTGGCTTCTAGCTaGGCTCTGCAACATTTTACG +
Preference number: 4 (lower is better)
Translates to: WGRLQSTFLRVGEITKYILLASS*ALQHFT
Trigger: CGTAAAATGTTGCAGAGCCCAGCTAGAAGCCAGGAG...AATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTACTTTGTAATCTTCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp ATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTTTGGTTTCCAGGCTCTaGTTTTTAACCTTTCCACTA +
Preference number: 4 (lower is better)
Translates to: MVTTLCSGRIVCSDRPLPLVSRL*FLTFPL
Trigger: TAGTGGAAAGGTTAAAAACCAGAGCCTGGAAACCAA...AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GGCTCTTACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCTTGGTTTCCAGGCTCTaGTTTTTAACCTTTCCACTA +
Preference number: 4 (lower is better)
Translates to: GSYLLSHPLSVDQIGNQPLVSRL*FLTFPL
Trigger: TAGTGGAAAGGTTAAAAACCAGAGCCTGGAAACCAA...GGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTAAGAGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp CAGAAAATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATACTGTCTTAGTCTTTaGTGCCCTAAGATTCATCCC +
Preference number: 4 (lower is better)
Translates to: QKMVTTLCSGRIVCSDRPYCLSL*CPKIHP
Trigger: GGGATGAATCTTAGGGCACCAAAGACTAAGACAGTA...TGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCATTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp CAGAAAATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCAGTACATTCTCAAGGGTaGGGAGAATTACAAAGAACC +
Preference number: 4 (lower is better)
Translates to: QKMVTTLCSGRIVCSDRPVHSQG*GELQRT
Trigger: GGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTAC...TGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCATTTTCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp ATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGACTGTAACAGAAATGTAAAGAGCAATGTTTTGTaGGCAGGGTGGATCTCACAA +
Preference number: 4 (lower is better)
Translates to: ILSGELTVTSWADCNRNVKSNVL*AGWISQ
Trigger: TTGTGAGATCCACCCTGCCCACAAAACATTGCTCTT...TACATTTCTGTTACAGTCAGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp AAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCAGAAGGCTTACTCTTCTaGAAAATAGCGACGCATTCC +
Preference number: 4 (lower is better)
Translates to: KKGEMKSLDIKDAGHELSEGLLF*KIATHS
Trigger: GGAATGCGTCGCTATTTTTCAGAAGAGTAAGCCTTC...TGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp TCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGAAGGCTTACTCTTCTaGAAAATAGCGACGCATTCC +
Preference number: 4 (lower is better)
Translates to: SRVGRITKNLLKGGEDYKEGLLF*KIATHS
Trigger: GGAATGCGTCGCTATTTTTCAGAAGAGTAAGCCTTC...TTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp TCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCACTTCATCACGGGTGTaGGAAAAACTCCCACCTTTA +
Preference number: 4 (lower is better)
Translates to: SHPLSVDQIGNQPLVMHFTSSRV*EKLPPL
Trigger: TAAAGGTGGGAGTTTTTCTCACACCCGTGATGAAGT...GAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp TACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGTCACTTTGCATTTTATaGAGGCCATCTTTCATCGTC +
Preference number: 4 (lower is better)
Translates to: YLLSHPLSVDQIGNQPLVSLCIL*RPSFIV
Trigger: GACGATGAAAGATGGCCTTCATAAAATGCAAAGTGA...CACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp TGTTTTGTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATGATAATTGTATTTTGTaGGGAGCTCAGATAGTAAGC +
Preference number: 4 (lower is better)
Translates to: CFVGRVDLTKYILKGGENDNCIL*GAQIVS
Trigger: GCTTACTATCTGAGCTCCTCACAAAATACAATTATC...ATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCACAAAACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTATATTCCCCACTGTCTaGAAGATTAAGATCCATCAA +
Preference number: 4 (lower is better)
Translates to: VMHFFQILSGELTVTSWAIFPTV*KIKIHQ
Trigger: TTGATGGATCTTAATCTTTCAGACAGTGGGGAATAT...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp ATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTTTCCTATACTTTTCCTaGAAGAGGCACATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: MVTTLCSGRIVCSDRPLPFLYFS*KRHIFF
Trigger: GAAGAAAATGTGCCTCTTTCAGGAAAAGTATAGGAA...AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp TGGGGAAGATTACAAAGTACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATTACCTTTCCACTAAGGTaGCTTTGGCTCTTACCTGCT +
Preference number: 4 (lower is better)
Translates to: WGRLQSTFLRVGEITKYITFPLR*LWLLPA
Trigger: AGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGT...AATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTACTTTGTAATCTTCCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp GTGAAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGCCCAAATCCAATTCTTaGTGGTCTCTCAAGCTTTCA +
Preference number: 4 (lower is better)
Translates to: VKKGEMKSLDIKDAGHELPKSNS*WSLKLS
Trigger: TGAAAGCTTGAGAGACCATCAAGAATTGGATTTGGG...CAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467562.5
ENST00000467761.5
ENST00000619531.4
CDS-3UTR GCA 90 bp AAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGCACCATCACAATCTGTaGAGGGTTAGTATTCTCCTA +
Preference number: 4 (lower is better)
Translates to: KGEMKSLDIKDAGHELSQHHHNL*RVSILL
Trigger: TAGGAGAATACTAACCCTGCACAGATTGTGATGGTG...CTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp AACATCCAGGCATTTATACTCAATGCAGGTAGTGGGTCAGTGAATGATGTCTTGGTCATGCAGAGGAGGTaGGTTCTAGGCTTTAGTATA +
Preference number: 4 (lower is better)
Translates to: NIQAFILNAGSGSVNDVLVMQRR*VLGFSI
Trigger: TATACTAAAGCCTAGAACGCACCTCCTCTGCATGAC...CAAGACATCATTCACTGACCCACTACCTGCATTGAGTATAAATGCCTGGATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp TCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAAAGCCAAAGGGAATATaGCTTGAGATCCACTCAGAG +
Preference number: 4 (lower is better)
Translates to: SRVGRITKNLLKGGEDYKKPKGI*LEIHSE
Trigger: CTCTGAGTGGATCTCAAGGCATATTCCCTTTGGCTT...TTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GGCTCTTACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCTGTAATCACTTGAATTaGTGTTCCTACATAGCAGGT +
Preference number: 4 (lower is better)
Translates to: GSYLLSHPLSVDQIGNQPCNHLN*CSYIAG
Trigger: ACCTGCTATGTAGGAACAGCAATTCAAGTGATTACA...GGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTAAGAGCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp TGGGGAAGATTACAAAGTACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATTTGGCTCGGTTCTACATaGACTGTGTGGATGGTAAGT +
Preference number: 4 (lower is better)
Translates to: WGRLQSTFLRVGEITKYIWLGST*TVWMVS
Trigger: ACTTACCATCCACACAGTGCATGTAGAACCGAGCCA...AATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTACTTTGTAATCTTCCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTAATCAGCAGAAAAGCTaGCAAAATCGCAGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: GRITKNLLKGGEDYKVPSNQQKS*QNRRGH
Trigger: GTGCCCTCTGCGATTTTGGCAGCTTTTCTGCTGATT...AGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCTTCCAGATTCTTAGTAATCAGCAGAAAAGCTaGCAAAATCGCAGAGGGCAC +
Preference number: 4 (lower is better)
Translates to: VDQIGNQPLVMHFFQILSNQQKS*QNRRGH
Trigger: GTGCCCTCTGCGATTTTGGCAGCTTTTCTGCTGATT...ACTAAGAATCTGGAAGAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GTGGGGAAGATTACAAAGTACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATCTTCTAGCTGGGCTCTaGAACATTTTACGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: VGKITKYLLKGGGDYKVHLLAGL*NILRSK
Trigger: TTTGGAGCGTAAAATGTTGCAGAGCCCAGCTAGAAG...ATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTACTTTGTAATCTTCCCCAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp TCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAACTTTGGCTCTTACCTaGTCTCTCACCCATTATCAG +
Preference number: 4 (lower is better)
Translates to: SRVGRITKNLLKGGEDYKTLALT*SLTHYQ
Trigger: CTGATAATGGGTGAGAGAGCAGGTAAGAGCCAAAGT...TTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGTCTTCTGCATATCTGGGATCTTaGCTTTCCAAATGGTCACTG +
Preference number: 4 (lower is better)
Translates to: EMKSLDIKDAGHELSQSSAYLGS*LSKWSL
Trigger: CAGTGACCATTTGGAAAGCCAAGATCCCAGATATGC...AGAAGACTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCTTCCAGATTCTTAGTCAACATCTTTCTTGTTaGGCTCCATCAGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: VDQIGNQPLVMHFFQILSQHLSC*APSAGC
Trigger: ACACCCTGCTGATGGAGCCCAACAAGAAAGATGTTG...ACTAAGAATCTGGAAGAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp TTACTTCTTTTGTGGATCTTCAGTTACTTTAGGCCATCTGGATGTATACGTGCACGACAGGCCATTGCCTaGAATTGTGGTGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: LLLLWIFSYFRPSGCIRARQAIA*NCGEER
Trigger: CCTTTCTTCACCACAATTCCAGGCAATGGCCTGTCG...TGCACGTATACATCCAGATGGCCTAAAGTAACTGAAGATCCACAAAAGAAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp TCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCCTCACTGTAACCTCCTaGGCTGACTGTAACAGAAAT +
Preference number: 4 (lower is better)
Translates to: SHPLSVDQIGNQPLVMHFLTVTS*ADCNRN
Trigger: ATTTCTGTTACAGTCAGCCCAGGAGGTTACAGTGAG...GAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GGTTTCCAGGCTCTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCTTGGTTTCCAGGCTCTaGTTTTTAACCTTTCCACTA +
Preference number: 4 (lower is better)
Translates to: GFQALVFNLSTKVTLALTLVSRL*FLTFPL
Trigger: TAGTGGAAAGGTTAAAAACCAGAGCCTGGAAACCAA...GGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAGAGCCTGGAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAATCAAATCAATCATCTTaGTTTCCAGGCTCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: VGRVDLTKYILKGGENYKSNQSS*FPGSGF
Trigger: AAAACCAGAGCCTGGAAACCAAGATGATTGATTTGA...TTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GTGAAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTACTGTCTTAGTCTTTaGTGCCCTAAGATTCATCCC +
Preference number: 4 (lower is better)
Translates to: VKKGEMKSLDIKDAGHELYCLSL*CPKIHP
Trigger: GGGATGAATCTTAGGGCACCAAAGACTAAGACAGTA...CAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp AAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGGTACATTCTCAAGGGTaGGGAGAATTACAAAGAACC +
Preference number: 4 (lower is better)
Translates to: KGEMKSLDIKDAGHELSQVHSQG*GELQRT
Trigger: GGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTAC...CTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp TCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCAAGAGCAATGTTTTGTaGGCAGGGTGGATCTCACAA +
Preference number: 4 (lower is better)
Translates to: SHPLSVDQIGNQPLVMHFKSNVL*AGWISQ
Trigger: TTGTGAGATCCACCCTGCCCACAAAACATTGCTCTT...GAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp GTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCTTCCAGATTCTTAGTACTTCATCACGGGTGTaGGAAAAACTCCCACCTTTA +
Preference number: 4 (lower is better)
Translates to: VDQIGNQPLVMHFFQILSTSSRV*EKLPPL
Trigger: TAAAGGTGGGAGTTTTTCTCACACCCGTGATGAAGT...ACTAAGAATCTGGAAGAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp ATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGACTGTAACAGAAATGTATCACTTTGCATTTTATaGAGGCCATCTTTCATCGTC +
Preference number: 4 (lower is better)
Translates to: ILSGELTVTSWADCNRNVSLCIL*RPSFIV
Trigger: GACGATGAAAGATGGCCTTCATAAAATGCAAAGTGA...TACATTTCTGTTACAGTCAGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp AGAAAATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTCACTTTGCATTTTATaGAGGCCATCTTTCATCGTC +
Preference number: 4 (lower is better)
Translates to: RKWLQLFAVVELSAPTGHSLCIL*RPSFIV
Trigger: GACGATGAAAGATGGCCTTCATAAAATGCAAAGTGA...ATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp AAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGCTCTTTGTTCCATaGGAATCGGGATTCATTGAT +
Preference number: 4 (lower is better)
Translates to: KKGEMKSLDIKDAGHELSQLFVP*ESGFID
Trigger: ATCAATGAATCCCGATTCTCATGGAACAAAGAGCTG...TGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp GGTTTCCAGGCTCTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCATATTCCCCACTGTCTaGAAGATTAAGATCCATCAA +
Preference number: 4 (lower is better)
Translates to: GFQALVFNLSTKVTLALTIFPTV*KIKIHQ
Trigger: TTGATGGATCTTAATCTTTCAGACAGTGGGGAATAT...GGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAGAGCCTGGAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp CAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGACTGTAACAGAAATATATTCCCCACTGTCTaGAAGATTAAGATCCATCAA +
Preference number: 4 (lower is better)
Translates to: QILSGELTVTSWADCNRNIFPTV*KIKIHQ
Trigger: TTGATGGATCTTAATCTTTCAGACAGTGGGGAATAT...ATTTCTGTTACAGTCAGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp CTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCTGCTCTCTCACCATATTCCCCACTGTCTaGAAGATTAAGATCCATCAA +
Preference number: 4 (lower is better)
Translates to: LVFNLSTKVTLALTCSLTIFPTV*KIKIHQ
Trigger: TTGATGGATCTTAATCTTTCAGACAGTGGGGAATAT...GGTGAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp CTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCTGCTCTCTCACCTTCCTATACTTTTCCTaGAAGAGGCACATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: LVFNLSTKVTLALTCSLTFLYFS*KRHIFF
Trigger: GAAGAAAATGTGCCTCTTTCAGGAAAAGTATAGGAA...GGTGAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp AACATCCAGGCATTTATACTCAATGCAGGTAGTGGGTCAGTGAATGATGTCTTGTCACCCATTATCAGTTaGTCAGATTGGGAATCAACC +
Preference number: 4 (lower is better)
Translates to: NIQAFILNAGSGSVNDVLSPIIS*SDWEST
Trigger: GGTTGATTCCCAATCTGATCAACTGATAATGGGTGA...CAAGACATCATTCACTGACCCACTACCTGCATTGAGTATAAATGCCTGGATGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp GTGGGGAAGATTACAAAGTACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATTCACCCATTATCAGTTaGTCAGATTGGGAATCAACC +
Preference number: 4 (lower is better)
Translates to: VGKITKYLLKGGGDYKVHSPIIS*SDWEST
Trigger: GGTTGATTCCCAATCTGATCAACTGATAATGGGTGA...ATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTACTTTGTAATCTTCCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp AGAAAATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTCGAGTTGGTTACCCTaGTACAACCGTTCATATAAA +
Preference number: 4 (lower is better)
Translates to: RKWLQLFAVVELSAPTGHSSWLP*YNRSYK
Trigger: TTTATATGAACGGTTGTATCAGGGTAACCAACTCGA...ATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCATTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GTGAAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGACTTCAGGACTGTATTaGATAATCTCTCCTGTGAGT +
Preference number: 4 (lower is better)
Translates to: VKKGEMKSLDIKDAGHELTSGLY*IISPVS
Trigger: ACTCACAGGAGAGATTATGCAATACAGTCCTGAAGT...CAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTTCAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357759.9
CDS-3UTR GCA 90 bp TCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAACACCATCACAATCTGTaGAGGGTTAGTATTCTCCTA +
Preference number: 4 (lower is better)
Translates to: SRVGRITKNLLKGGEDYKHHHNL*RVSILL
Trigger: TAGGAGAATACTAACCCTGCACAGATTGTGATGGTG...TTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000357759.9
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp TGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGATGTCCTGTTTaGATATCTGGGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: WISQSTFSRVGRITKNLLKGCPV*ISGILA
Trigger: AGCCAAGATCCCAGATATGCAAACAGGACATCCCTT...AAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp TACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGTGTAATCACTTGAATTaGTGTTCCTACATAGCAGGT +
Preference number: 4 (lower is better)
Translates to: YLLSHPLSVDQIGNQPLVCNHLN*CSYIAG
Trigger: ACCTGCTATGTAGGAACAGCAATTCAAGTGATTACA...CACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGTGTAATCACTTGAATTaGTGTTCCTACATAGCAGGT +
Preference number: 4 (lower is better)
Translates to: VHSQGWGELQRTFLRVGKCNHLN*CSYIAG
Trigger: ACCTGCTATGTAGGAACAGCAATTCAAGTGATTACA...CTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp CAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGACTGTAACAGAAATTGTAATCACTTGAATTaGTGTTCCTACATAGCAGGT +
Preference number: 4 (lower is better)
Translates to: QILSGELTVTSWADCNRNCNHLN*CSYIAG
Trigger: ACCTGCTATGTAGGAACAGCAATTCAAGTGATTACA...ATTTCTGTTACAGTCAGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTAAACACTTAACACGCTaGATATTAAGAAGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: VMHFFQILSGELTVTSWAKHLTR*ILRSCL
Trigger: CAAACAGCTTCTTAATATGCAGCGTGTTAAGTGTTT...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTCGCCCTGTCCATGTTTaGTTCAGCAGTGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: GRITKNLLKGGEDYKVPSRPVHV*FSSEFS
Trigger: TGAAAATTCACTGCTGAAGCAAACATGGACAGGGCG...AGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp TGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTCGCCCTGTCCATGTTTaGTTCAGCAGTGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: WISQSTFSRVGRITKNLLRPVHV*FSSEFS
Trigger: TGAAAATTCACTGCTGAAGCAAACATGGACAGGGCG...AAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GTGGGGCAGGAACAAATCACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTAGCTGGGCTCTaGAACATTTTACGCTCCAAA +
Preference number: 4 (lower is better)
Translates to: VGQEQITMVECHQLRLFLLLAGL*NILRSK
Trigger: TTTGGAGCGTAAAATGTTGCAGAGCCCAGCTAGAAG...TAAAAATAGCCTTAACTGATGACATTCCACCATTGTGATTTGTTCCTGCCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp AGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGTCTTCTCTCATTTACTTTGGCTCTTACCTaGTCTCTCACCCATTATCAG +
Preference number: 4 (lower is better)
Translates to: SHWILRMQVMSCHSLLSFTLALT*SLTHYQ
Trigger: CTGATAATGGGTGAGAGAGCAGGTAAGAGCCAAAGT...AAATGAGAGAAGACTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GTGAAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTTGGTTTCCAGGCTCTaGTTTTTAACCTTTCCACTA +
Preference number: 4 (lower is better)
Translates to: VKKGEMKSLDIKDAGHELLVSRL*FLTFPL
Trigger: TAGTGGAAAGGTTAAAAACCAGAGCCTGGAAACCAA...CAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GGTTTCCAGGCTCTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCTCAAATCAATCATCTTaGTTTCCAGGCTCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: GFQALVFNLSTKVTLALTSNQSS*FPGSGF
Trigger: AAAACCAGAGCCTGGAAACCAAGATGATTGATTTGA...GGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAGAGCCTGGAAACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp GTGGGGCAGGAACAAATCACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTAAAAGGGAATATGCCTTaGGATCCACTCAGAGATGTT +
Preference number: 4 (lower is better)
Translates to: VGQEQITMVECHQLRLFLKGNMP*DPLRDV
Trigger: AACATCTCTGAGTGGATCTCAAGGCATATTCCCTTT...TAAAAATAGCCTTAACTGATGACATTCCACCATTGTGATTTGTTCCTGCCCCAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp AACATCCAGGCATTTATACTCAATGCAGGTAGTGGGTCAGTGAATGATGTCTTGTCACTTTGCATTTTATaGAGGCCATCTTTCATCGTC +
Preference number: 4 (lower is better)
Translates to: NIQAFILNAGSGSVNDVLSLCIL*RPSFIV
Trigger: GACGATGAAAGATGGCCTTCATAAAATGCAAAGTGA...CAAGACATCATTCACTGACCCACTACCTGCATTGAGTATAAATGCCTGGATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp TGGGGAAGATTACAAAGTACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATTCAGCTCTTTGTTCCATaGGAATCGGGATTCATTGAT +
Preference number: 4 (lower is better)
Translates to: WGRLQSTFLRVGEITKYIQLFVP*ESGFID
Trigger: ATCAATGAATCCCGATTCTCATGGAACAAAGAGCTG...AATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTACTTTGTAATCTTCCCCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp TGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTCAGCTCTTTGTTCCATaGGAATCGGGATTCATTGAT +
Preference number: 4 (lower is better)
Translates to: WISQSTFSRVGRITKNLLQLFVP*ESGFID
Trigger: ATCAATGAATCCCGATTCTCATGGAACAAAGAGCTG...AAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp AAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGATATTCCCCACTGTCTaGAAGATTAAGATCCATCAA +
Preference number: 4 (lower is better)
Translates to: KGEMKSLDIKDAGHELSQIFPTV*KIKIHQ
Trigger: TTGATGGATCTTAATCTTTCAGACAGTGGGGAATAT...CTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp AGAAAATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATATATTCCCCACTGTCTaGAAGATTAAGATCCATCAA +
Preference number: 4 (lower is better)
Translates to: RKWLQLFAVVELSAPTGHIFPTV*KIKIHQ
Trigger: TTGATGGATCTTAATCTTTCAGACAGTGGGGAATAT...ATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCATTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCTTCCAGATTCTTAGTCACCATCACAATCTGTaGAGGGTTAGTATTCTCCTA +
Preference number: 4 (lower is better)
Translates to: VDQIGNQPLVMHFFQILSHHHNL*RVSILL
Trigger: TAGGAGAATACTAACCCTGCACAGATTGTGATGGTG...ACTAAGAATCTGGAAGAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000357759.9
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp ATACCTTGTCAAATCAATCATCTTGGTTTCCAGGCTCTGGTTTTTAACCTTTCCAAGCCAAAGGGAATATaGCTTGAGATCCACTCAGAG +
Preference number: 4 (lower is better)
Translates to: IPCQINHLGFQALVFNLSKPKGI*LEIHSE
Trigger: CTCTGAGTGGATCTCAAGGCATATTCCCTTTGGCTT...GGAAAGGTTAAAAACCAGAGCCTGGAAACCAAGATGATTGATTTGACAAGGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp TACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGAAACACTTAACACGCTaGATATTAAGAAGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: YLLSHPLSVDQIGNQPLVKHLTR*ILRSCL
Trigger: CAAACAGCTTCTTAATATGCAGCGTGTTAAGTGTTT...CACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp ACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCAGTGGTAGAATTGTCTaGTCCGACAGGCCATTGCCT +
Preference number: 4 (lower is better)
Translates to: TMVECHQLRLFLLLLWIFSGRIV*SDRPLP
Trigger: AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACT...GAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp AAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCATGTCTTAGTCTTTGGTaGCCTAAGATTCATCCCAAA +
Preference number: 4 (lower is better)
Translates to: KKGEMKSLDIKDAGHELSCLSLW*PKIHPK
Trigger: TTTGGGATGAATCTTAGGGCACCAAAGACTAAGACA...TGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp ACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCCGACAGGCCATTGCCTaGAATTGTGGTGAAGAAAGG +
Preference number: 4 (lower is better)
Translates to: TMVECHQLRLFLLLLWIFRQAIA*NCGEER
Trigger: CCTTTCTTCACCACAATTCCAGGCAATGGCCTGTCG...GAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp ATACCTTGTCAAATCAATCATCTTGGTTTCCAGGCTCTGGTTTTTAACCTTTCCCTCACTGTAACCTCCTaGGCTGACTGTAACAGAAAT +
Preference number: 4 (lower is better)
Translates to: IPCQINHLGFQALVFNLSLTVTS*ADCNRN
Trigger: ATTTCTGTTACAGTCAGCCCAGGAGGTTACAGTGAG...GGAAAGGTTAAAAACCAGAGCCTGGAAACCAAGATGATTGATTTGACAAGGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GTGAAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCAAATCAATCATCTTaGTTTCCAGGCTCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: VKKGEMKSLDIKDAGHELSNQSS*FPGSGF
Trigger: AAAACCAGAGCCTGGAAACCAAGATGATTGATTTGA...CAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTTCAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCTTCCAGATTCTTAGTTACTGTCTTAGTCTTTaGTGCCCTAAGATTCATCCC +
Preference number: 4 (lower is better)
Translates to: VDQIGNQPLVMHFFQILSYCLSL*CPKIHP
Trigger: GGGATGAATCTTAGGGCACCAAAGACTAAGACAGTA...ACTAAGAATCTGGAAGAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp TTACTTCTTTTGTGGATCTTCAGTTACTTTAGGCCATCTGGATGTATACGTGCAAAAGGGAATATGCCTTaGGATCCACTCAGAGATGTT +
Preference number: 4 (lower is better)
Translates to: LLLLWIFSYFRPSGCIRAKGNMP*DPLRDV
Trigger: AACATCTCTGAGTGGATCTCAAGGCATATTCCCTTT...TGCACGTATACATCCAGATGGCCTAAAGTAACTGAAGATCCACAAAAGAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp ATACCTTGTCAAATCAATCATCTTGGTTTCCAGGCTCTGGTTTTTAACCTTTCCGGATCCCCTCTCAAATaGAGAAGGGAGAATTATATC +
Preference number: 4 (lower is better)
Translates to: IPCQINHLGFQALVFNLSGSPLK*RRENYI
Trigger: GATATAATTCTCCCTTCTTCATTTGAGAGGGGATCC...GGAAAGGTTAAAAACCAGAGCCTGGAAACCAAGATGATTGATTTGACAAGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp TCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGATAATTGTATTTTGTaGGGAGCTCAGATAGTAAGC +
Preference number: 4 (lower is better)
Translates to: SRVGRITKNLLKGGEDYKDNCIL*GAQIVS
Trigger: GCTTACTATCTGAGCTCCTCACAAAATACAATTATC...TTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp AAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCAGATAATTGTATTTTGTaGGGAGCTCAGATAGTAAGC +
Preference number: 4 (lower is better)
Translates to: KKGEMKSLDIKDAGHELSDNCIL*GAQIVS
Trigger: GCTTACTATCTGAGCTCCTCACAAAATACAATTATC...TGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp ATACCTTGTCAAATCAATCATCTTGGTTTCCAGGCTCTGGTTTTTAACCTTTCCCAGCTCTTTGTTCCATaGGAATCGGGATTCATTGAT +
Preference number: 4 (lower is better)
Translates to: IPCQINHLGFQALVFNLSQLFVP*ESGFID
Trigger: ATCAATGAATCCCGATTCTCATGGAACAAAGAGCTG...GGAAAGGTTAAAAACCAGAGCCTGGAAACCAAGATGATTGATTTGACAAGGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp AACATCCAGGCATTTATACTCAATGCAGGTAGTGGGTCAGTGAATGATGTCTTGTTCCTATACTTTTCCTaGAAGAGGCACATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: NIQAFILNAGSGSVNDVLFLYFS*KRHIFF
Trigger: GAAGAAAATGTGCCTCTTTCAGGAAAAGTATAGGAA...CAAGACATCATTCACTGACCCACTACCTGCATTGAGTATAAATGCCTGGATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp TTACTTCTTTTGTGGATCTTCAGTTACTTTAGGCCATCTGGATGTATACGTGCATCACCCATTATCAGTTaGTCAGATTGGGAATCAACC +
Preference number: 4 (lower is better)
Translates to: LLLLWIFSYFRPSGCIRASPIIS*SDWEST
Trigger: GGTTGATTCCCAATCTGATCAACTGATAATGGGTGA...TGCACGTATACATCCAGATGGCCTAAAGTAACTGAAGATCCACAAAAGAAGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp CTTCTTTTGTGGATCTTCAGTTACTTTAGGCCATCTGGATGTATACGTGCAAATTCACCCATTATCAGTTaGTCAGATTGGGAATCAACC +
Preference number: 4 (lower is better)
Translates to: LLLWIFSYFRPSGCIRANSPIIS*SDWEST
Trigger: GGTTGATTCCCAATCTGATCAACTGATAATGGGTGA...ATTTGCACGTATACATCCAGATGGCCTAAAGTAACTGAAGATCCACAAAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp AATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCAGACCTTTCCACTAAGGTaGCTTTGGCTCTTACCTGCT +
Preference number: 4 (lower is better)
Translates to: NGGMSSVKAIFTSFVDLQTFPLR*LWLLPA
Trigger: AGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGT...CTGAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp ACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCACCTTTCCACTAAGGTaGCTTTGGCTCTTACCTGCT +
Preference number: 4 (lower is better)
Translates to: TMVECHQLRLFLLLLWIFTFPLR*LWLLPA
Trigger: AGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGT...GAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp GTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCTTCCAGATTCTTAGTTCGAGTTGGTTACCCTaGTACAACCGTTCATATAAA +
Preference number: 4 (lower is better)
Translates to: VDQIGNQPLVMHFFQILSSSWLP*YNRSYK
Trigger: TTTATATGAACGGTTGTATCAGGGTAACCAACTCGA...ACTAAGAATCTGGAAGAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp GAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTTAAGCTTTCAAATCAGCCTTaGGATGTACCACAAGGGCAT +
Preference number: 4 (lower is better)
Translates to: ELQRTFLRVGKITKYLLKLSNQP*DVPQGH
Trigger: ATGCCCTTGTGGTACATCTCAAGGCTGATTTGAAAG...CTTAAGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467761.5
ENST00000619531.4
CDS-3UTR GCA 90 bp AAATACCTTGTCAAATCAATCATCTTGGTTTCCAGGCTCTGGTTTTTAACCTTTGAGGAAGAAAGACAGTaGTGTCTGTGCCTTCATGTC +
Preference number: 4 (lower is better)
Translates to: KYLVKSIILVSRLWFLTFEEERQ*CLCLHV
Trigger: GACATGAAGGCACAGACAGCACTGTCTTTCTTCCTC...AAAGGTTAAAAACCAGAGCCTGGAAACCAAGATGATTGATTTGACAAGGTATTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GTGAAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGAAACACTTAACACGCTaGATATTAAGAAGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: VKKGEMKSLDIKDAGHELKHLTR*ILRSCL
Trigger: CAAACAGCTTCTTAATATGCAGCGTGTTAAGTGTTT...CAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTTCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTTAAGACTTTGGCTCTTACCTaGTCTCTCACCCATTATCAG +
Preference number: 4 (lower is better)
Translates to: ELQRTFLRVGKITKYLLKTLALT*SLTHYQ
Trigger: CTGATAATGGGTGAGAGAGCAGGTAAGAGCCAAAGT...CTTAAGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp TGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTTGTCTTAGTCTTTGGTaGCCTAAGATTCATCCCAAA +
Preference number: 4 (lower is better)
Translates to: WISQSTFSRVGRITKNLLCLSLW*PKIHPK
Trigger: TTTGGGATGAATCTTAGGGCACCAAAGACTAAGACA...AAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp AATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCAGCAACATCTTTCTTGTTaGGCTCCATCAGCAGGGTGT +
Preference number: 4 (lower is better)
Translates to: NGGMSSVKAIFTSFVDLQQHLSC*APSAGC
Trigger: ACACCCTGCTGATGGAGCCCAACAAGAAAGATGTTG...CTGAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp CTTCTTTTGTGGATCTTCAGTTACTTTAGGCCATCTGGATGTATACGTGCAAATTACTGTCTTAGTCTTTaGTGCCCTAAGATTCATCCC +
Preference number: 4 (lower is better)
Translates to: LLLWIFSYFRPSGCIRANYCLSL*CPKIHP
Trigger: GGGATGAATCTTAGGGCACCAAAGACTAAGACAGTA...ATTTGCACGTATACATCCAGATGGCCTAAAGTAACTGAAGATCCACAAAAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp AAATACCTTGTCAAATCAATCATCTTGGTTTCCAGGCTCTGGTTTTTAACCTTTACTTCATCACGGGTGTaGGAAAAACTCCCACCTTTA +
Preference number: 4 (lower is better)
Translates to: KYLVKSIILVSRLWFLTFTSSRV*EKLPPL
Trigger: TAAAGGTGGGAGTTTTTCTCACACCCGTGATGAAGT...AAAGGTTAAAAACCAGAGCCTGGAAACCAAGATGATTGATTTGACAAGGTATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp AGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGTCTTCTCTCATTTGATAATTGTATTTTGTaGGGAGCTCAGATAGTAAGC +
Preference number: 4 (lower is better)
Translates to: SHWILRMQVMSCHSLLSFDNCIL*GAQIVS
Trigger: GCTTACTATCTGAGCTCCTCACAAAATACAATTATC...AAATGAGAGAAGACTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp GGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTTTCCTATACTTTTCCTaGAAGAGGCACATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: GRITKNLLKGGEDYKVPSFLYFS*KRHIFF
Trigger: GAAGAAAATGTGCCTCTTTCAGGAAAAGTATAGGAA...AGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp TGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTTTCCTATACTTTTCCTaGAAGAGGCACATTTTCTTC +
Preference number: 4 (lower is better)
Translates to: WISQSTFSRVGRITKNLLFLYFS*KRHIFF
Trigger: GAAGAAAATGTGCCTCTTTCAGGAAAAGTATAGGAA...AAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp ATACCTTGTCAAATCAATCATCTTGGTTTCCAGGCTCTGGTTTTTAACCTTTCCTCGAGTTGGTTACCCTaGTACAACCGTTCATATAAA +
Preference number: 4 (lower is better)
Translates to: IPCQINHLGFQALVFNLSSSWLP*YNRSYK
Trigger: TTTATATGAACGGTTGTATCAGGGTAACCAACTCGA...GGAAAGGTTAAAAACCAGAGCCTGGAAACCAAGATGATTGATTTGACAAGGTAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp TGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTTGTAATCACTTGAATTaGTGTTCCTACATAGCAGGT +
Preference number: 4 (lower is better)
Translates to: WISQSTFSRVGRITKNLLCNHLN*CSYIAG
Trigger: ACCTGCTATGTAGGAACAGCAATTCAAGTGATTACA...AAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp GTGGGGAAGATTACAAAGTACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATAAACACTTAACACGCTaGATATTAAGAAGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: VGKITKYLLKGGGDYKVHKHLTR*ILRSCL
Trigger: CAAACAGCTTCTTAATATGCAGCGTGTTAAGTGTTT...ATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTACTTTGTAATCTTCCCCAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp ACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCCGCCCTGTCCATGTTTaGTTCAGCAGTGAATTTTCA +
Preference number: 4 (lower is better)
Translates to: TMVECHQLRLFLLLLWIFRPVHV*FSSEFS
Trigger: TGAAAATTCACTGCTGAAGCAAACATGGACAGGGCG...GAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp AATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCAGACTTTGGCTCTTACCTaGTCTCTCACCCATTATCAG +
Preference number: 4 (lower is better)
Translates to: NGGMSSVKAIFTSFVDLQTLALT*SLTHYQ
Trigger: CTGATAATGGGTGAGAGAGCAGGTAAGAGCCAAAGT...CTGAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCTTCCAGATTCTTAGTTCAAATCAATCATCTTaGTTTCCAGGCTCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: VDQIGNQPLVMHFFQILSSNQSS*FPGSGF
Trigger: AAAACCAGAGCCTGGAAACCAAGATGATTGATTTGA...ACTAAGAATCTGGAAGAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp AGATTCATCCCAAATCGAGTTGGTTACCCTGATACAACCGTTCATATAAAACTATACTGTCTTAGTCTTTaGTGCCCTAAGATTCATCCC +
Preference number: 4 (lower is better)
Translates to: RFIPNRVGYPDTTVHIKLYCLSL*CPKIHP
Trigger: GGGATGAATCTTAGGGCACCAAAGACTAAGACAGTA...TAGTTTTATATGAACGGTTGTATCAGGGTAACCAACTCGATTTGGGATGAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp GAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTTAAGGTACATTCTCAAGGGTaGGGAGAATTACAAAGAACC +
Preference number: 4 (lower is better)
Translates to: ELQRTFLRVGKITKYLLKVHSQG*GELQRT
Trigger: GGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTAC...CTTAAGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp AAATACCTTGTCAAATCAATCATCTTGGTTTCCAGGCTCTGGTTTTTAACCTTTAAGAGCAATGTTTTGTaGGCAGGGTGGATCTCACAA +
Preference number: 4 (lower is better)
Translates to: KYLVKSIILVSRLWFLTFKSNVL*AGWISQ
Trigger: TTGTGAGATCCACCCTGCCCACAAAACATTGCTCTT...AAAGGTTAAAAACCAGAGCCTGGAAACCAAGATGATTGATTTGACAAGGTATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp ACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCTTGATAGTAGTGTTTTaGGGTGGGCGGCAAAAAGCT +
Preference number: 4 (lower is better)
Translates to: TMVECHQLRLFLLLLWIFLIVVF*GGRQKA
Trigger: AGCTTTTTGCCGCCCACCCCAAAACACTACTATCAA...GAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATTGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000482099.1
CDS-3UTR TCA 90 bp AAATACCTTGTCAAATCAATCATCTTGGTTTCCAGGCTCTGGTTTTTAACCTTTAAAGGGAATATGCCTTaGGATCCACTCAGAGATGTT +
Preference number: 4 (lower is better)
Translates to: KYLVKSIILVSRLWFLTFKGNMP*DPLRDV
Trigger: AACATCTCTGAGTGGATCTCAAGGCATATTCCCTTT...AAAGGTTAAAAACCAGAGCCTGGAAACCAAGATGATTGATTTGACAAGGTATTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp TTACTTCTTTTGTGGATCTTCAGTTACTTTAGGCCATCTGGATGTATACGTGCAGATAATTGTATTTTGTaGGGAGCTCAGATAGTAAGC +
Preference number: 4 (lower is better)
Translates to: LLLLWIFSYFRPSGCIRADNCIL*GAQIVS
Trigger: GCTTACTATCTGAGCTCCTCACAAAATACAATTATC...TGCACGTATACATCCAGATGGCCTAAAGTAACTGAAGATCCACAAAAGAAGTAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR TCA 90 bp AATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCAGCAGCTCTTTGTTCCATaGGAATCGGGATTCATTGAT +
Preference number: 4 (lower is better)
Translates to: NGGMSSVKAIFTSFVDLQQLFVP*ESGFID
Trigger: ATCAATGAATCCCGATTCTCATGGAACAAAGAGCTG...CTGAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp AATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCAGCACCATCACAATCTGTaGAGGGTTAGTATTCTCCTA +
Preference number: 4 (lower is better)
Translates to: NGGMSSVKAIFTSFVDLQHHHNL*RVSILL
Trigger: TAGGAGAATACTAACCCTGCACAGATTGTGATGGTG...CTGAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000357759.9
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp AGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGTCTTCTCTCATTTAAACACTTAACACGCTaGATATTAAGAAGCTGTTTG +
Preference number: 4 (lower is better)
Translates to: SHWILRMQVMSCHSLLSFKHLTR*ILRSCL
Trigger: CAAACAGCTTCTTAATATGCAGCGTGTTAAGTGTTT...AAATGAGAGAAGACTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR GCA 90 bp ACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCCCCTCATATGCACAATaGCATTGGAGATCTTCTCTA +
Preference number: 4 (lower is better)
Translates to: TMVECHQLRLFLLLLWIFPSYAQ*HWRSSL
Trigger: TAGAGAAGATCTCCAATGGCATTGTGCATATGAGGG...GAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482099.1
CDS-3UTR CCA 90 bp AATAAGTACATTGGCTCACCCTCATATGCACAATGCCATTGGAGATCTTCTCTATATGCACAATGCCATTaGAGATCTTCTCTACAAATA +
Preference number: 4 (lower is better)
Translates to: NKYIGSPSYAQCHWRSSLYAQCH*RSSLQI
Trigger: TATTTGTAGAGAAGATCTCCAATGGCATTGTGCATA...TAGAGAAGATCTCCAATGGCATTGTGCATATGAGGGTGAGCCAATGTACTTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482099.1
CDS-3UTR TCA 90 bp AAATACCTTGTCAAATCAATCATCTTGGTTTCCAGGCTCTGGTTTTTAACCTTTTCGAGTTGGTTACCCTaGTACAACCGTTCATATAAA +
Preference number: 4 (lower is better)
Translates to: KYLVKSIILVSRLWFLTFSSWLP*YNRSYK
Trigger: TTTATATGAACGGTTGTATCAGGGTAACCAACTCGA...AAAGGTTAAAAACCAGAGCCTGGAAACCAAGATGATTGATTTGACAAGGTATTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CCA 90 bp AATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCAGTCAAATCAATCATCTTaGTTTCCAGGCTCTGGTTTT +
Preference number: 4 (lower is better)
Translates to: NGGMSSVKAIFTSFVDLQSNQSS*FPGSGF
Trigger: AAAACCAGAGCCTGGAAACCAAGATGATTGATTTGA...CTGAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS GCA 90 bp GAGGGACACAACATCTTTCTTGTTGGGCTCCATCAGCAGGGTGTCTaGTCCTCCTGGCTTCTAGCTGGGCTCTGCAACATTTTACGCTCC +
Preference number: 5 (lower is better)
Translates to: EGHNIFLVGLHQQGV*SSWLLAGLCNILRS
Trigger: GGAGCGTAAAATGTTGCAGAGCCCAGCTAGAAGCCAGGAGGAGCAGACACCCTGCTGATGGAGCCCAACAAGAAAGATGTTGTGTCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TTTGTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACCAGGGGATGCGATGCTaGGCTTGGGCTCAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: FVGRVDLTKYILKGGENYQGMRC*AWAQRP
Trigger: AGGCCTCTGAGCCCAAGCCAAGCATCGCATCCCCTG...GTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGACTGTAACAGACAGGGGATGCGATGCTaGGCTTGGGCTCAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: FQILSGELTVTSWADCNRQGMRC*AWAQRP
Trigger: AGGCCTCTGAGCCCAAGCCAAGCATCGCATCCCCTG...TCTGTTACAGTCAGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGCAGGGGATGCGATGCTaGGCTTGGGCTCAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: YLLSHPLSVDQIGNQPLVQGMRC*AWAQRP
Trigger: AGGCCTCTGAGCCCAAGCCAAGCATCGCATCCCCTG...CACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp CTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCTGCTCTCTCACCCAGGGGATGCGATGCTaGGCTTGGGCTCAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: LVFNLSTKVTLALTCSLTQGMRC*AWAQRP
Trigger: AGGCCTCTGAGCCCAAGCCAAGCATCGCATCCCCTG...GGTGAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp ACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAATTGTGTGCTCCGACAGGCCATaGCCTGGAATTGTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: TLCSGRIVCSDRPLPGIVCSDRP*PGIVVK
Trigger: CTTCACCACAATTCCAGGCAATGGCCTGTCGGAGCA...CACAATTCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp AAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGCAGGGGATGCGATGCTaGGCTTGGGCTCAGAGGCCT +
Preference number: 5 (lower is better)
Translates to: KGEMKSLDIKDAGHELSQQGMRC*AWAQRP
Trigger: AGGCCTCTGAGCCCAAGCCAAGCATCGCATCCCCTG...CTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS CCA 90 bp CTTTTCCTGAAAGAGGCACATTTTCTTCGCCATTATCGGGTGCACTaGGACAGCGCTCACCAGGAGGGACACAACATCTTTCTTGTTGGG +
Preference number: 5 (lower is better)
Translates to: LFLKEAHFLRHYRVH*DSAHQEGHNIFLVG
Trigger: CCCAACAAGAAAGATGTTGTGTCCCTCCTGGTGAGCGCTGTCCCAGTGCACCCGATAATGGCGAAGAAAATGTGCCTCTTTCAGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS CCA 90 bp CTTTTCCTGAAAGAGGCACATTTTCTTCGCCATTATCGGGTGCACTaGGACAGCGCTCACCAGGAGGGACACAACATCTTTCTCTGCAAC +
Preference number: 5 (lower is better)
Translates to: LFLKEAHFLRHYRVH*DSAHQEGHNIFLCN
Trigger: GTTGCAGAGAAAGATGTTGTGTCCCTCCTGGTGAGCGCTGTCCCAGTGCACCCGATAATGGCGAAGAAAATGTGCCTCTTTCAGGAAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000491820.5
CDS-3UTR CAA 90 bp GGCTCTTACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCTGCTCCGACAGGCCATaGCCTGGAATTGTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: GSYLLSHPLSVDQIGNQPCSDRP*PGIVVK
Trigger: CTTCACCACAATTCCAGGCAATGGCCTGTCGGAGCA...GGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTAAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTTGCTCCGACAGGCCATaGCCTGGAATTGTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: VMHFFQILSGELTVTSWACSDRP*PGIVVK
Trigger: CTTCACCACAATTCCAGGCAATGGCCTGTCGGAGCA...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAATGCTCCGACAGGCCATaGCCTGGAATTGTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: VGRVDLTKYILKGGENYKCSDRP*PGIVVK
Trigger: CTTCACCACAATTCCAGGCAATGGCCTGTCGGAGCA...TTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp ACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAATTGTGATGGGAAGCTGTTTCTaGGCTCGGTTCTACATGCAC +
Preference number: 5 (lower is better)
Translates to: TLCSGRIVCSDRPLPGIVMGSCF*ARFYMH
Trigger: GTGCATGTAGAACCGAGCCAAGAAACAGCTTCCCAT...CACAATTCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAGACACAACATCTTTCTaGTTGGGCTCCATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VTTLCSGRIVCSDRPLPGDTTSF*LGSISR
Trigger: CCTGCTGATGGAGCCCAACAAGAAAGATGTTGTGTC...TCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp ACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAATTGTGTCCACTAAGGTGACTTaGGCTCTTACCTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: TLCSGRIVCSDRPLPGIVSTKVT*ALTCSL
Trigger: GAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGA...CACAATTCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTATGGGAAGCTGTTTCTaGGCTCGGTTCTACATGCAC +
Preference number: 5 (lower is better)
Translates to: VMHFFQILSGELTVTSWAMGSCF*ARFYMH
Trigger: GTGCATGTAGAACCGAGCCAAGAAACAGCTTCCCAT...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GTGAAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTGCTCCGACAGGCCATaGCCTGGAATTGTGGTGAAG +
Preference number: 5 (lower is better)
Translates to: VKKGEMKSLDIKDAGHELCSDRP*PGIVVK
Trigger: CTTCACCACAATTCCAGGCAATGGCCTGTCGGAGCA...CAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GGTGACTTTGGCTCTTACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGTCCACTAAGGTGACTTaGGCTCTTACCTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: GDFGSYLLSHPLSVDQIGSTKVT*ALTCSL
Trigger: GAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGA...CCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTAAGAGCCAAAGTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGACTGTAACAGATCCACTAAGGTGACTTaGGCTCTTACCTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: FQILSGELTVTSWADCNRSTKVT*ALTCSL
Trigger: GAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGA...TCTGTTACAGTCAGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp CTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAATTGTGGTGCCCCAAATCCAATTCTaGATGGTCTCTCAAGCTTTC +
Preference number: 5 (lower is better)
Translates to: LCSGRIVCSDRPLPGIVVPQIQF*MVSQAF
Trigger: GAAAGCTTGAGAGACCATCAAGAATTGGATTTGGGG...CACCACAATTCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467562.5
ENST00000467761.5
ENST00000619531.4
CDS-3UTR CAA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTAAAGGGATGTCCTGTTaGCATATCTGGGATCTTGGC +
Preference number: 5 (lower is better)
Translates to: VMHFFQILSGELTVTSWAKGMSC*HIWDLG
Trigger: GCCAAGATCCCAGATATGCAAACAGGACATCCCTTT...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GGTGACTTTGGCTCTTACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGAAAGGGATGTCCTGTTaGCATATCTGGGATCTTGGC +
Preference number: 5 (lower is better)
Translates to: GDFGSYLLSHPLSVDQIGKGMSC*HIWDLG
Trigger: GCCAAGATCCCAGATATGCAAACAGGACATCCCTTT...CCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTAAGAGCCAAAGTCACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp CAGAAAATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTTGCAGTGGTAGAATaGTCTGCTCCGACAGGCCAT +
Preference number: 5 (lower is better)
Translates to: QKMVTTLCSGRIVCSDRPFAVVE*SAPTGH
Trigger: ATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAA...TGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCATTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GGTTTCCAGGCTCTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCTTTGCAGTGGTAGAATaGTCTGCTCCGACAGGCCAT +
Preference number: 5 (lower is better)
Translates to: GFQALVFNLSTKVTLALTFAVVE*SAPTGH
Trigger: ATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAA...GGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAGAGCCTGGAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp CAGAAAATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATCCACTAAGGTGACTTaGGCTCTTACCTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: QKMVTTLCSGRIVCSDRPSTKVT*ALTCSL
Trigger: GAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGA...TGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCATTTTCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp ATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGCTTTCAAATCAGCCTaGAGATGTACCACAAGGGCA +
Preference number: 5 (lower is better)
Translates to: MVTTLCSGRIVCSDRPLPAFKSA*RCTTRA
Trigger: TGCCCTTGTGGTACATCTCAAGGCTGATTTGAAAGC...AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467562.5
ENST00000467761.5
ENST00000619531.4
CDS-3UTR CAA 90 bp GTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAGAAGGCTTACTCTTCTaGAGATCCACTCAGAGATGT +
Preference number: 5 (lower is better)
Translates to: VTTLCSGRIVCSDRPLPGEGLLF*RSTQRC
Trigger: ACATCTCTGAGTGGATCTCAAGAAGAGTAAGCCTTC...TCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467562.5
CDS-3UTR CAA 90 bp TTATTTCACCTGGGTGCAGGTGGGCTGAGTCCGAAAAGAGAGTCAGCGAAGGGTCAAAACAGCTGTGTTTaGTCCATTTTCTCTGCTATG +
Preference number: 5 (lower is better)
Translates to: LFHLGAGGLSPKRESAKGQNSCV*SIFSAM
Trigger: CATAGCAGAGAAAATGGACAAAACACAGCTGTTTTG...ACCCTTCGCTGACTCTCTTTTCGGACTCAGCCCACCTGCACCCAGGTGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489514.6
CDS-3UTR CAA 90 bp CTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCTGCTCTCTCACCAAAGGGATGTCCTGTTaGCATATCTGGGATCTTGGC +
Preference number: 5 (lower is better)
Translates to: LVFNLSTKVTLALTCSLTKGMSC*HIWDLG
Trigger: GCCAAGATCCCAGATATGCAAACAGGACATCCCTTT...GGTGAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp ACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTGGAATTGTGTCAGAGATAGGTGTGTaGTCCATTTTCCACGTGATA +
Preference number: 5 (lower is better)
Translates to: TLCSGRIVCSDRPLPGIVSEIGV*SIFHVI
Trigger: TATCACGTGGAAAATGGACAACACACCTATCTCTGA...CACAATTCCAGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp ATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGACTGTAACAGAAATGTAACAACATCTTTCTTGTaGGGCTCCATCAGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: ILSGELTVTSWADCNRNVTTSFL*GSISRV
Trigger: CACCCTGCTGATGGAGCCCAACAAGAAAGATGTTGT...TACATTTCTGTTACAGTCAGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GTGAAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGACAACATCTTTCTTGTaGGGCTCCATCAGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: VKKGEMKSLDIKDAGHELTTSFL*GSISRV
Trigger: CACCCTGCTGATGGAGCCCAACAAGAAAGATGTTGT...CAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp AGAAAATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATGACACAACATCTTTCTaGTTGGGCTCCATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: RKWLQLFAVVELSAPTGHDTTSF*LGSISR
Trigger: CCTGCTGATGGAGCCCAACAAGAAAGATGTTGTGTC...ATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCATTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp CTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCTGCTCTCTCACCTCATCCCAAATCGAGTaGGTTACCCTGATACAACCG +
Preference number: 5 (lower is better)
Translates to: LVFNLSTKVTLALTCSLTSSQIE*VTLIQP
Trigger: CGGTTGTATCAGGGTAACCAACTCGATTTGGGATGA...GGTGAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp CAGAAAATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCACAAAGGGAATATGCCTaGAGATCCACTCAGAGATGT +
Preference number: 5 (lower is better)
Translates to: QKMVTTLCSGRIVCSDRPQREYA*RSTQRC
Trigger: ACATCTCTGAGTGGATCTCAAGGCATATTCCCTTTG...TGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCATTTTCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TTTGTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACTCAGAGATAGGTGTGTaGTCCATTTTCCACGTGATA +
Preference number: 5 (lower is better)
Translates to: FVGRVDLTKYILKGGENYSEIGV*SIFHVI
Trigger: TATCACGTGGAAAATGGACAACACACCTATCTCTGA...GTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TGTTTTGTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTCAGAGATAGGTGTGTaGTCCATTTTCCACGTGATA +
Preference number: 5 (lower is better)
Translates to: CFVGRVDLTKYILKGGENSEIGV*SIFHVI
Trigger: TATCACGTGGAAAATGGACAACACACCTATCTCTGA...ATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCACAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TGTTTTGTGGGCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATCCTGTTTCTTCCATGTaGTTTTCAGAGATAGGTGTG +
Preference number: 5 (lower is better)
Translates to: CFVGRVDLTKYILKGGENPVSSM*FSEIGV
Trigger: CACACCTATCTCTGAAAACAACATGGAAGAAACAGG...ATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGCCCACAAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GGTGACTTTGGCTCTTACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGCCTGTTTCTTCCATGTaGTTTTCAGAGATAGGTGTG +
Preference number: 5 (lower is better)
Translates to: GDFGSYLLSHPLSVDQIGPVSSM*FSEIGV
Trigger: CACACCTATCTCTGAAAACAACATGGAAGAAACAGG...CCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTAAGAGCCAAAGTCACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTCCTGTTTCTTCCATGTaGTTTTCAGAGATAGGTGTG +
Preference number: 5 (lower is better)
Translates to: VMHFFQILSGELTVTSWAPVSSM*FSEIGV
Trigger: CACACCTATCTCTGAAAACAACATGGAAGAAACAGG...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCATGGGAAGCTGTTTCTaGGCTCGGTTCTACATGCAC +
Preference number: 5 (lower is better)
Translates to: SHPLSVDQIGNQPLVMHFMGSCF*ARFYMH
Trigger: GTGCATGTAGAACCGAGCCAAGAAACAGCTTCCCAT...GAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp AACATCCAGGCATTTATACTCAATGCAGGTAGTGGGTCAGTGAATGATGTCTTGGACACAACATCTTTCTaGTTGGGCTCCATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: NIQAFILNAGSGSVNDVLDTTSF*LGSISR
Trigger: CCTGCTGATGGAGCCCAACAAGAAAGATGTTGTGTC...CAAGACATCATTCACTGACCCACTACCTGCATTGAGTATAAATGCCTGGATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCGACACAACATCTTTCTaGTTGGGCTCCATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SHPLSVDQIGNQPLVMHFDTTSF*LGSISR
Trigger: CCTGCTGATGGAGCCCAACAAGAAAGATGTTGTGTC...GAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TCTTCAGTTACTTTAGGCCATCTGGATGTATACGTGCAAATCACAGGGGATGCGCCCCAAATCCAATTCTaGATGGTCTCTCAAGCTTTC +
Preference number: 5 (lower is better)
Translates to: SSVTLGHLDVYVQITGDAPQIQF*MVSQAF
Trigger: GAAAGCTTGAGAGACCATCAAGAATTGGATTTGGGG...CGCATCCCCTGTGATTTGCACGTATACATCCAGATGGCCTAAAGTAACTGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467761.5
ENST00000619531.4
CDS-3UTR CAA 90 bp GTGGGGCAGGAACAAATCACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTAACATGCTCTCCTCCCTaGACTTCAGGACTGTATTGC +
Preference number: 5 (lower is better)
Translates to: VGQEQITMVECHQLRLFLTCSPP*TSGLYC
Trigger: GCAATACAGTCCTGAAGTCAAGGGAGGAGAGCATGT...TAAAAATAGCCTTAACTGATGACATTCCACCATTGTGATTTGTTCCTGCCCCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357759.9
CDS-3UTR CAA 90 bp AAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGCAAAGGGAATATGCCTaGAGATCCACTCAGAGATGT +
Preference number: 5 (lower is better)
Translates to: KGEMKSLDIKDAGHELSQQREYA*RSTQRC
Trigger: ACATCTCTGAGTGGATCTCAAGGCATATTCCCTTTG...CTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAAAAGGGATGTCCTGTTaGCATATCTGGGATCTTGGC +
Preference number: 5 (lower is better)
Translates to: SRVGRITKNLLKGGEDYKKGMSC*HIWDLG
Trigger: GCCAAGATCCCAGATATGCAAACAGGACATCCCTTT...TTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGA
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGCCTGTTTCTTCCATGTaGTTTTCAGAGATAGGTGTG +
Preference number: 5 (lower is better)
Translates to: VHSQGWGELQRTFLRVGKPVSSM*FSEIGV
Trigger: CACACCTATCTCTGAAAACAACATGGAAGAAACAGG...CTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GGTTTCCAGGCTCTGGTTTTTAACCTTTCCACTAAGGTGACTTTGGCTCTTACCTGGTTTATCAGCTCTTaGTTCCATGAGAATCGGGAT +
Preference number: 5 (lower is better)
Translates to: GFQALVFNLSTKVTLALTWFISS*FHENRD
Trigger: ATCCCGATTCTCATGGAACAAAGAGCTGATAAACCA...GGTAAGAGCCAAAGTCACCTTAGTGGAAAGGTTAAAAACCAGAGCCTGGAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TCTTCAGTTACTTTAGGCCATCTGGATGTATACGTGCAAATCACAGGGGATGCGTGGTTTATCAGCTCTTaGTTCCATGAGAATCGGGAT +
Preference number: 5 (lower is better)
Translates to: SSVTLGHLDVYVQITGDAWFISS*FHENRD
Trigger: ATCCCGATTCTCATGGAACAAAGAGCTGATAAACCA...CGCATCCCCTGTGATTTGCACGTATACATCCAGATGGCCTAAAGTAACTGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp ATCCAGGCATTTATACTCAATGCAGGTAGTGGGTCAGTGAATGATGTCTTGAAAATGGGAAGCTGTTTCTaGGCTCGGTTCTACATGCAC +
Preference number: 5 (lower is better)
Translates to: IQAFILNAGSGSVNDVLKMGSCF*ARFYMH
Trigger: GTGCATGTAGAACCGAGCCAAGAAACAGCTTCCCAT...TTTCAAGACATCATTCACTGACCCACTACCTGCATTGAGTATAAATGCCTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCTTCCAGATTCTTAGTATGGGAAGCTGTTTCTaGGCTCGGTTCTACATGCAC +
Preference number: 5 (lower is better)
Translates to: VDQIGNQPLVMHFFQILSMGSCF*ARFYMH
Trigger: GTGCATGTAGAACCGAGCCAAGAAACAGCTTCCCAT...ACTAAGAATCTGGAAGAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp AGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGTCTTCTCTCATTTATGGGAAGCTGTTTCTaGGCTCGGTTCTACATGCAC +
Preference number: 5 (lower is better)
Translates to: SHWILRMQVMSCHSLLSFMGSCF*ARFYMH
Trigger: GTGCATGTAGAACCGAGCCAAGAAACAGCTTCCCAT...AAATGAGAGAAGACTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp AGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGTCTTCTCTCATTTACAACATCTTTCTTGTaGGGCTCCATCAGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: SHWILRMQVMSCHSLLSFTTSFL*GSISRV
Trigger: CACCCTGCTGATGGAGCCCAACAAGAAAGATGTTGT...AAATGAGAGAAGACTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCTTCCAGATTCTTAGTACAACATCTTTCTTGTaGGGCTCCATCAGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: VDQIGNQPLVMHFFQILSTTSFL*GSISRV
Trigger: CACCCTGCTGATGGAGCCCAACAAGAAAGATGTTGT...ACTAAGAATCTGGAAGAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TGGGGAAGATTACAAAGTACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATTGACACAACATCTTTCTaGTTGGGCTCCATCAGCAGG +
Preference number: 5 (lower is better)
Translates to: WGRLQSTFLRVGEITKYIDTTSF*LGSISR
Trigger: CCTGCTGATGGAGCCCAACAAGAAAGATGTTGTGTC...AATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTACTTTGTAATCTTCCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp AGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGTCTTCTCTCATTTTTTGCAGTGGTAGAATaGTCTGCTCCGACAGGCCAT +
Preference number: 5 (lower is better)
Translates to: SHWILRMQVMSCHSLLSFFAVVE*SAPTGH
Trigger: ATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAA...AAATGAGAGAAGACTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTTTTGCAGTGGTAGAATaGTCTGCTCCGACAGGCCAT +
Preference number: 5 (lower is better)
Translates to: GRITKNLLKGGEDYKVPSFAVVE*SAPTGH
Trigger: ATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAA...AGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TACCTGCTCTCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGCTCACCCATTATCAGTaGATCAGATTGGGAATCAAC +
Preference number: 5 (lower is better)
Translates to: YLLSHPLSVDQIGNQPLVLTHYQ*IRLGIN
Trigger: GTTGATTCCCAATCTGATCAACTGATAATGGGTGAG...CACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGAGAGCAGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTTCCACTAAGGTGACTTaGGCTCTTACCTGCTCTCTC +
Preference number: 5 (lower is better)
Translates to: WISQSTFSRVGRITKNLLSTKVT*ALTCSL
Trigger: GAGAGAGCAGGTAAGAGCCAAAGTCACCTTAGTGGA...AAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp AACATCCAGGCATTTATACTCAATGCAGGTAGTGGGTCAGTGAATGATGTCTTGTCATCCCAAATCGAGTaGGTTACCCTGATACAACCG +
Preference number: 5 (lower is better)
Translates to: NIQAFILNAGSGSVNDVLSSQIE*VTLIQP
Trigger: CGGTTGTATCAGGGTAACCAACTCGATTTGGGATGA...CAAGACATCATTCACTGACCCACTACCTGCATTGAGTATAAATGCCTGGATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GTGAAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGCCTGTTTCTTCCATGTaGTTTTCAGAGATAGGTGTG +
Preference number: 5 (lower is better)
Translates to: VKKGEMKSLDIKDAGHELPVSSM*FSEIGV
Trigger: CACACCTATCTCTGAAAACAACATGGAAGAAACAGG...CAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp AGAAAATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATCCTGTTTCTTCCATGTaGTTTTCAGAGATAGGTGTG +
Preference number: 5 (lower is better)
Translates to: RKWLQLFAVVELSAPTGHPVSSM*FSEIGV
Trigger: CACACCTATCTCTGAAAACAACATGGAAGAAACAGG...ATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCATTTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GTGAAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTGGTTTATCAGCTCTTaGTTCCATGAGAATCGGGAT +
Preference number: 5 (lower is better)
Translates to: VKKGEMKSLDIKDAGHELWFISS*FHENRD
Trigger: ATCCCGATTCTCATGGAACAAAGAGCTGATAAACCA...CAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTTCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp ATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTGCCTAAAATCCATAAGCCTTaGTTATGGGAAGCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: MVTTLCSGRIVCSDRPLPKIHKP*LWEAVS
Trigger: AGAAACAGCTTCCCATAACAAAGGCTTATGGATTTT...AGGCAATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp CTTCTTTTGTGGATCTTCAGTTACTTTAGGCCATCTGGATGTATACGTGCAAATTTTGCAGTGGTAGAATaGTCTGCTCCGACAGGCCAT +
Preference number: 5 (lower is better)
Translates to: LLLWIFSYFRPSGCIRANFAVVE*SAPTGH
Trigger: ATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAA...ATTTGCACGTATACATCCAGATGGCCTAAAGTAACTGAAGATCCACAAAAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TGGGGAAGATTACAAAGTACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATTGCTTTCAAATCAGCCTaGAGATGTACCACAAGGGCA +
Preference number: 5 (lower is better)
Translates to: WGRLQSTFLRVGEITKYIAFKSA*RCTTRA
Trigger: TGCCCTTGTGGTACATCTCAAGGCTGATTTGAAAGC...AATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTACTTTGTAATCTTCCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467761.5
ENST00000619531.4
CDS-3UTR CAA 90 bp TCTCACCCATTATCAGTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCCCCCAAATCCAATTCTaGATGGTCTCTCAAGCTTTC +
Preference number: 5 (lower is better)
Translates to: SHPLSVDQIGNQPLVMHFPQIQF*MVSQAF
Trigger: GAAAGCTTGAGAGACCATCAAGAATTGGATTTGGGG...GAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAACTGATAATGGGTGAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000467761.5
ENST00000619531.4
CDS-3UTR CAA 90 bp CAGAAAATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCAATAAGAATAAGTACATaGGCTCACCCTCATATGCAC +
Preference number: 5 (lower is better)
Translates to: QKMVTTLCSGRIVCSDRPIRIST*AHPHMH
Trigger: GTGCATATGAGGGTGAGCCAATGTACTTATTCTTAT...TGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCATTTTCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482099.1
CDS-3UTR CAA 90 bp GTGATGCATTTCTTCCAGATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTTGTGTTTCTTTCCACTaGTATACAATCCCATGTTTC +
Preference number: 5 (lower is better)
Translates to: VMHFFQILSGELTVTSWACVSFH*YTIPCF
Trigger: GAAACATGGGATTGTATACAAGTGGAAAGAAACACA...AGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAATCTGGAAGAAATGCATCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482099.1
CDS-3UTR CAA 90 bp TGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTCAAAGGGAATATGCCTaGAGATCCACTCAGAGATGT +
Preference number: 5 (lower is better)
Translates to: WISQSTFSRVGRITKNLLQREYA*RSTQRC
Trigger: ACATCTCTGAGTGGATCTCAAGGCATATTCCCTTTG...AAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAATCAGAGATAGGTGTGTaGTCCATTTTCCACGTGATA +
Preference number: 5 (lower is better)
Translates to: SRVGRITKNLLKGGEDYKSEIGV*SIFHVI
Trigger: TATCACGTGGAAAATGGACAACACACCTATCTCTGA...TTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAATGGTTTATCAGCTCTTaGTTCCATGAGAATCGGGAT +
Preference number: 5 (lower is better)
Translates to: SRVGRITKNLLKGGEDYKWFISS*FHENRD
Trigger: ATCCCGATTCTCATGGAACAAAGAGCTGATAAACCA...TTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GCAGGGTGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACTCATCCGAAGAAATATaGCATAAATATTCCCCACTG +
Preference number: 5 (lower is better)
Translates to: AGWISQSTFSRVGRITKNSSEEI*HKYSPL
Trigger: CAGTGGGGAATATTTATGCAATATTTCTTCGGATGA...GTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCACCCTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GTTACTTTAGGCCATCTGGATGTATACGTGCAAATCACAGGGGATGCGATGCTTAAAATCCATAAGCCTTaGTTATGGGAAGCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: VTLGHLDVYVQITGDAMLKIHKP*LWEAVS
Trigger: AGAAACAGCTTCCCATAACAAAGGCTTATGGATTTT...AAGCATCGCATCCCCTGTGATTTGCACGTATACATCCAGATGGCCTAAAGTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTTAAGACAACATCTTTCTTGTaGGGCTCCATCAGCAGGGTG +
Preference number: 5 (lower is better)
Translates to: ELQRTFLRVGKITKYLLKTTSFL*GSISRV
Trigger: CACCCTGCTGATGGAGCCCAACAAGAAAGATGTTGT...CTTAAGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp AAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACTCACCCATTATCAGTaGATCAGATTGGGAATCAAC +
Preference number: 5 (lower is better)
Translates to: KKGEMKSLDIKDAGHELSLTHYQ*IRLGIN
Trigger: GTTGATTCCCAATCTGATCAACTGATAATGGGTGAG...TGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TCAAGGGTGGGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTCAAATCAATCATCTaGGTTTCCAGGCTCTGGTTT +
Preference number: 5 (lower is better)
Translates to: SRVGRITKNLLKGGEDYKVKSII*VSRLWF
Trigger: AAACCAGAGCCTGGAAACCAAGATGATTGATTTGAC...TTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCCCACCCTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GTGGGGAAGATTACAAAGTACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATGTCAAATCAATCATCTaGGTTTCCAGGCTCTGGTTT +
Preference number: 5 (lower is better)
Translates to: VGKITKYLLKGGGDYKVHVKSII*VSRLWF
Trigger: AAACCAGAGCCTGGAAACCAAGATGATTGATTTGAC...ATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTACTTTGTAATCTTCCCCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp ATACCTTGTCAAATCAATCATCTTGGTTTCCAGGCTCTGGTTTTTAACCTTTCCTCATCCCAAATCGAGTaGGTTACCCTGATACAACCG +
Preference number: 5 (lower is better)
Translates to: IPCQINHLGFQALVFNLSSSQIE*VTLIQP
Trigger: CGGTTGTATCAGGGTAACCAACTCGATTTGGGATGA...GGAAAGGTTAAAAACCAGAGCCTGGAAACCAAGATGATTGATTTGACAAGGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS GCA 90 bp ATGTCCTGTTTGCATATCTGGGATCTTGGCTTTCCAAATGGTCACTaGCTTTGTAGTAACTGTGAACCTTATAGCTATCTTGATACTTCC +
Preference number: 5 (lower is better)
Translates to: MSCLHIWDLGFPNGH*LCSNCEPYSYLDTS
Trigger: GGAAGTATCAAGATAGCTATAAGGTTCACAGTTACTACAAAGGCAGTGACCATTTGGAAAGCCAAGATCCCAGATATGCAAACAGGACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000357759.9
ENST00000462629.5
ENST00000463019.7
ENST00000467282.5
ENST00000467761.5
ENST00000482430.5
ENST00000489514.6
ENST00000491820.5
ENST00000619531.4
CDS GCA 90 bp CGCATTCCCATTTTGAATCTCATTATAGAAAAGGGATGTCCTGTTTaGATATCTGGGATCTTGGCTTTCCAAATGGTCACTGCCTTTGTA +
Preference number: 5 (lower is better)
Translates to: RIPILNLIIEKGCPV*ISGILAFQMVTAFV
Trigger: TACAAAGGCAGTGACCATTTGGAAAGCCAAGATCCCAGATATGCAAACAGGACATCCCTTTTCTATAATGAGATTCAAAATGGGAATGCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000357759.9
ENST00000463019.7
ENST00000467282.5
ENST00000467761.5
ENST00000482430.5
ENST00000489514.6
ENST00000491820.5
ENST00000619531.4
CDS-3UTR CAA 90 bp ATCCAGGCATTTATACTCAATGCAGGTAGTGGGTCAGTGAATGATGTCTTGAAATCAGAGATAGGTGTGTaGTCCATTTTCCACGTGATA +
Preference number: 5 (lower is better)
Translates to: IQAFILNAGSGSVNDVLKSEIGV*SIFHVI
Trigger: TATCACGTGGAAAATGGACAACACACCTATCTCTGA...TTTCAAGACATCATTCACTGACCCACTACCTGCATTGAGTATAAATGCCTGGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTTCAGAGATAGGTGTGTaGTCCATTTTCCACGTGATA +
Preference number: 5 (lower is better)
Translates to: WISQSTFSRVGRITKNLLSEIGV*SIFHVI
Trigger: TATCACGTGGAAAATGGACAACACACCTATCTCTGA...AAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTTGGTTTATCAGCTCTTaGTTCCATGAGAATCGGGAT +
Preference number: 5 (lower is better)
Translates to: GRITKNLLKGGEDYKVPSWFISS*FHENRD
Trigger: ATCCCGATTCTCATGGAACAAAGAGCTGATAAACCA...AGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp AGAAAATGGTTACAACTCTTTGCAGTGGTAGAATTGTCTGCTCCGACAGGCCATTCATCCGAAGAAATATaGCATAAATATTCCCCACTG +
Preference number: 5 (lower is better)
Translates to: RKWLQLFAVVELSAPTGHSSEEI*HKYSPL
Trigger: CAGTGGGGAATATTTATGCAATATTTCTTCGGATGA...ATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAAGAGTTGTAACCATTTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp ATTCTTAGTGGAGAGCTCACTGTAACCTCCTGGGCTGACTGTAACAGAAATGTAAAAATCCATAAGCCTTaGTTATGGGAAGCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: ILSGELTVTSWADCNRNVKIHKP*LWEAVS
Trigger: AGAAACAGCTTCCCATAACAAAGGCTTATGGATTTT...TACATTTCTGTTACAGTCAGCCCAGGAGGTTACAGTGAGCTCTCCACTAAGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp AAATACCTTGTCAAATCAATCATCTTGGTTTCCAGGCTCTGGTTTTTAACCTTTTTTGCAGTGGTAGAATaGTCTGCTCCGACAGGCCAT +
Preference number: 5 (lower is better)
Translates to: KYLVKSIILVSRLWFLTFFAVVE*SAPTGH
Trigger: ATGGCCTGTCGGAGCAGACAATTCTACCACTGCAAA...AAAGGTTAAAAACCAGAGCCTGGAAACCAAGATGATTGATTTGACAAGGTATTT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TGGATCTCACAAAGTACATTCTCAAGGGTGGGGAGAATTACAAAGAACCTTCTTGTCAAATCAATCATCTaGGTTTCCAGGCTCTGGTTT +
Preference number: 5 (lower is better)
Translates to: WISQSTFSRVGRITKNLLVKSII*VSRLWF
Trigger: AAACCAGAGCCTGGAAACCAAGATGATTGATTTGAC...AAGAAGGTTCTTTGTAATTCTCCCCACCCTTGAGAATGTACTTTGTGAGATCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp AGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGTCTTCTCTCATTTGTCAAATCAATCATCTaGGTTTCCAGGCTCTGGTTT +
Preference number: 5 (lower is better)
Translates to: SHWILRMQVMSCHSLLSFVKSII*VSRLWF
Trigger: AAACCAGAGCCTGGAAACCAAGATGATTGATTTGAC...AAATGAGAGAAGACTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp AAGAAAGGGGAGATGAAGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCATCATCCGAAGAAATATaGCATAAATATTCCCCACTG +
Preference number: 5 (lower is better)
Translates to: KKGEMKSLDIKDAGHELSSSEEI*HKYSPL
Trigger: CAGTGGGGAATATTTATGCAATATTTCTTCGGATGA...TGACAACTCATGACCTGCATCCTTAATATCCAGTGACTTCATCTCCCCTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp ACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCTCATCCCAAATCGAGTaGGTTACCCTGATACAACCG +
Preference number: 5 (lower is better)
Translates to: TMVECHQLRLFLLLLWIFSSQIE*VTLIQP
Trigger: CGGTTGTATCAGGGTAACCAACTCGATTTGGGATGA...GAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS TCA 90 bp ATCTTGATACTTCCAGTGTATTACGACTTCGGATCCCCTCTCAAATaGAGAAGGGAGAATTATATCTTCATCAAGTCTTCCAATGACGAT +
Preference number: 5 (lower is better)
Translates to: ILILPVYYDFGSPLK*RRENYIFIKSSNDD
Trigger: ATCGTCATTGGAAGACTTGATGAAGATATAATTCTCCCTTCTTCATTTGAGAGGGGATCCGAAGTCGTAATACACTGGAAGTATCAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357759.9
ENST00000462629.5
ENST00000463019.7
ENST00000467282.5
ENST00000467761.5
ENST00000482430.5
ENST00000489514.6
ENST00000491820.5
ENST00000619531.4
CDS CCA 90 bp CATTTTGAATCTCATTATAGAAAAGGGATGTCCTGTTTGCATATCTaGGATCTTGGCTTTCCAAATGGTCACTGCCTTTGTAGTAACTGT +
Preference number: 5 (lower is better)
Translates to: HFESHYRKGMSCLHI*DLGFPNGHCLCSNC
Trigger: ACAGTTACTACAAAGGCAGTGACCATTTGGAAAGCCAAGATCCCAGATATGCAAACAGGACATCCCTTTTCTATAATGAGATTCAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000357759.9
ENST00000463019.7
ENST00000467282.5
ENST00000467761.5
ENST00000482430.5
ENST00000489514.6
ENST00000491820.5
ENST00000619531.4
CDS-3UTR CAA 90 bp GAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTTAAGTGGTTTATCAGCTCTTaGTTCCATGAGAATCGGGAT +
Preference number: 5 (lower is better)
Translates to: ELQRTFLRVGKITKYLLKWFISS*FHENRD
Trigger: ATCCCGATTCTCATGGAACAAAGAGCTGATAAACCA...CTTAAGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp AGTCACTGGATATTAAGGATGCAGGTCATGAGTTGTCACAGTCTTCTCTCATTTTCATCCGAAGAAATATaGCATAAATATTCCCCACTG +
Preference number: 5 (lower is better)
Translates to: SHWILRMQVMSCHSLLSFSSEEI*HKYSPL
Trigger: CAGTGGGGAATATTTATGCAATATTTCTTCGGATGA...AAATGAGAGAAGACTGTGACAACTCATGACCTGCATCCTTAATATCCAGTGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCTTCCAGATTCTTAGTTCATCCGAAGAAATATaGCATAAATATTCCCCACTG +
Preference number: 5 (lower is better)
Translates to: VDQIGNQPLVMHFFQILSSSEEI*HKYSPL
Trigger: CAGTGGGGAATATTTATGCAATATTTCTTCGGATGA...ACTAAGAATCTGGAAGAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp TGGGGAAGATTACAAAGTACCTTCTTAAGGGTGGGGGAGATTACAAAGTACATTAAAATCCATAAGCCTTaGTTATGGGAAGCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: WGRLQSTFLRVGEITKYIKIHKP*LWEAVS
Trigger: AGAAACAGCTTCCCATAACAAAGGCTTATGGATTTT...AATGTACTTTGTAATCTCCCCCACCCTTAAGAAGGTACTTTGTAATCTTCCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GTTGATCAGATTGGGAATCAACCCCTAGTGATGCATTTCTTCCAGATTCTTAGTAAAATCCATAAGCCTTaGTTATGGGAAGCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: VDQIGNQPLVMHFFQILSKIHKP*LWEAVS
Trigger: AGAAACAGCTTCCCATAACAAAGGCTTATGGATTTT...ACTAAGAATCTGGAAGAAATGCATCACTAGGGGTTGATTCCCAATCTGATCAAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp AGATTCATCCCAAATCGAGTTGGTTACCCTGATACAACCGTTCATATAAAACTACTCACCCATTATCAGTaGATCAGATTGGGAATCAAC +
Preference number: 5 (lower is better)
Translates to: RFIPNRVGYPDTTVHIKLLTHYQ*IRLGIN
Trigger: GTTGATTCCCAATCTGATCAACTGATAATGGGTGAG...TAGTTTTATATGAACGGTTGTATCAGGGTAACCAACTCGATTTGGGATGAATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTTAAGGTCAAATCAATCATCTaGGTTTCCAGGCTCTGGTTT +
Preference number: 5 (lower is better)
Translates to: ELQRTFLRVGKITKYLLKVKSII*VSRLWF
Trigger: AAACCAGAGCCTGGAAACCAAGATGATTGATTTGAC...CTTAAGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp GGGAGAATTACAAAGAACCTTCTTAAGGGTGGGGAAGATTACAAAGTACCTTCTATATGCACAATGCCATaGGAGATCTTCTCTACAAAT +
Preference number: 5 (lower is better)
Translates to: GRITKNLLKGGEDYKVPSICTMP*EIFSTN
Trigger: ATTTGTAGAGAAGATCTCCAATGGCATTGTGCATAT...AGAAGGTACTTTGTAATCTTCCCCACCCTTAAGAAGGTTCTTTGTAATTCTCCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482099.1
CDS TCA 90 bp CTACATAGCAGGTGTAAATTCCTTCGTCCAGAAGGCTTACTCTTCTaGAAAATAGCGACGCATTCCCATTTTGAATCTCATTATAGAAAA +
Preference number: 5 (lower is better)
Translates to: LHSRCKFLRPEGLLF*KIATHSHFESHYRK
Trigger: TTTTCTATAATGAGATTCAAAATGGGAATGCGTCGCTATTTTTCAGAAGAGTAAGCCTTCTGGACGAAGGAATTTACACCTGCTATGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000357759.9
ENST00000463019.7
ENST00000467282.5
ENST00000467761.5
ENST00000482430.5
ENST00000489514.6
ENST00000491820.5
ENST00000619531.4
CDS-3UTR CAA 90 bp ACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCTGTTCCCAACTTGAATaGGGGAAAATGAAGTGTTCC +
Preference number: 5 (lower is better)
Translates to: TMVECHQLRLFLLLLWIFCSQLE*GKMKCS
Trigger: GGAACACTTCATTTTCCCCAATTCAAGTTGGGAACA...GAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000357759.9
CDS-3UTR CAA 90 bp TTACTTCTTTTGTGGATCTTCAGTTACTTTAGGCCATCTGGATGTATACGTGCAAAAATCCATAAGCCTTaGTTATGGGAAGCTGTTTCT +
Preference number: 5 (lower is better)
Translates to: LLLLWIFSYFRPSGCIRAKIHKP*LWEAVS
Trigger: AGAAACAGCTTCCCATAACAAAGGCTTATGGATTTT...TGCACGTATACATCCAGATGGCCTAAAGTAACTGAAGATCCACAAAAGAAGTAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS-3UTR CAA 90 bp ACAATGGTGGAATGTCATCAGTTAAGGCTATTTTTACTTCTTTTGTGGATCTTCCTCACCCATTATCAGTaGATCAGATTGGGAATCAAC +
Preference number: 5 (lower is better)
Translates to: TMVECHQLRLFLLLLWIFLTHYQ*IRLGIN
Trigger: GTTGATTCCCAATCTGATCAACTGATAATGGGTGAG...GAAGATCCACAAAAGAAGTAAAAATAGCCTTAACTGATGACATTCCACCATTGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS CCA 90 bp CTGTCTGAAAGATTAAGATCCATCAAATTCATAGAGAAGTCACTCTaGTTTATCAGCTCTTTGTTCCATGAGAATCGGGATTCATTGATA +
Preference number: 5 (lower is better)
Translates to: LSERLRSIKFIEKSL*FISSLFHENRDSLI
Trigger: TATCAATGAATCCCGATTCTCATGGAACAAAGAGCTGATAAACCAGAGTGACTTCTCTATGAATTTGATGGATCTTAATCTTTCAGACAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000491820.5
ENST00000619531.4
CDS-3UTR CAA 90 bp AGATTCATCCCAAATCGAGTTGGTTACCCTGATACAACCGTTCATATAAAACTATCATCCGAAGAAATATaGCATAAATATTCCCCACTG +
Preference number: 5 (lower is better)
Translates to: RFIPNRVGYPDTTVHIKLSSEEI*HKYSPL
Trigger: CAGTGGGGAATATTTATGCAATATTTCTTCGGATGA...TAGTTTTATATGAACGGTTGTATCAGGGTAACCAACTCGATTTGGGATGAATCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000357759.9
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS GCA 72 bp AACATCTTTCTTGTTGGGCTCCATCAGCAGGGTGTCTaGTCCTCCTGGCTTCTAGCTGGGCTCTGCAACATT +
Preference number: 6 (lower is better)
Translates to: NIFLVGLHQQGV*SSWLLAGLCNI
Trigger: AATGTTGCAGAGCCCAGCTAGAAGCCAGGAGGAGCAGACACCCTGCTGATGGAGCCCAACAAGAAAGATGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000619531.4
CDS CCA 72 bp GCCTTACCACATTTTCTTCGCCATTATCGGGTGCACTaGGACAGCGCTCACCAGGAGGGACACAACATCTTT +
Preference number: 6 (lower is better)
Translates to: ALPHFLRHYRVH*DSAHQEGHNIF
Trigger: AAAGATGTTGTGTCCCTCCTGGTGAGCGCTGTCCCAGTGCACCCGATAATGGCGAAGAAAATGTGGTAAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482099.1
CDS CCA 72 bp AAAGAGGCACATTTTCTTCGCCATTATCGGGTGCACTaGGACAGCGCTCACCAGGAGGGACACAACATCTTT +
Preference number: 6 (lower is better)
Translates to: KEAHFLRHYRVH*DSAHQEGHNIF
Trigger: AAAGATGTTGTGTCCCTCCTGGTGAGCGCTGTCCCAGTGCACCCGATAATGGCGAAGAAAATGTGCCTCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000489514.6
ENST00000491820.5
ENST00000619531.4
CDS CAA 72 bp GCCAAAATCGCAGAGGGCACCAAAATCCATAAGCCTTaGTTATGGGAAGCTGTTTCTTGGCTCGGTTCTACA +
Preference number: 6 (lower is better)
Translates to: AKIAEGTKIHKP*LWEAVSWLGST
Trigger: TGTAGAACCGAGCCAAGAAACAGCTTCCCATAACAAAGGCTTATGGATTTTGGTGCCCTCTGCGATTTTGGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000491820.5
ENST00000619531.4
CDS CAA 72 bp ACTGCCTTTGTAGTAACTGTGAACCTTATAGCTATCTaGATACTTCCAGTGTATTACGACTTCGGATCCCCT +
Preference number: 6 (lower is better)
Translates to: TAFVVTVNLIAI*ILPVYYDFGSP
Trigger: AGGGGATCCGAAGTCGTAATACACTGGAAGTATCAAGATAGCTATAAGGTTCACAGTTACTACAAAGGCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000357759.9
ENST00000462629.5
ENST00000463019.7
ENST00000467282.5
ENST00000467761.5
ENST00000482430.5
ENST00000489514.6
ENST00000491820.5
ENST00000619531.4
CDS CAA 90 bp ACGCATTCCCATTTTGAATCTCATTATAGAAAAGGGATGTCCTGTTaGCATATCTGGGATCTTGGCTTTCCAAATGGTCACTGCCTTTGT +
Preference number: 6 (lower is better)
Translates to: THSHFESHYRKGMSC*HIWDLGFPNGHCLC
Trigger: ACAAAGGCAGTGACCATTTGGAAAGCCAAGATCCCAGATATGCAAACAGGACATCCCTTTTCTATAATGAGATTCAAAATGGGAATGCGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000357759.9
ENST00000463019.7
ENST00000467282.5
ENST00000467761.5
ENST00000482430.5
ENST00000489514.6
ENST00000491820.5
ENST00000619531.4
CDS CAA 90 bp AATCTCATTATAGAAAAGGGATGTCCTGTTTGCATATCTGGGATCTaGGCTTTCCAAATGGTCACTGCCTTTGTAGTAACTGTGAACCTT +
Preference number: 6 (lower is better)
Translates to: NLIIEKGCPVCISGI*AFQMVTAFVVTVNL
Trigger: AAGGTTCACAGTTACTACAAAGGCAGTGACCATTTGGAAAGCCAAGATCCCAGATATGCAAACAGGACATCCCTTTTCTATAATGAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000357759.9
ENST00000463019.7
ENST00000467282.5
ENST00000467761.5
ENST00000482430.5
ENST00000489514.6
ENST00000491820.5
ENST00000619531.4
CDS TCA 72 bp AGGTGTAAATTCCTTCGTCCAGAAGGCTTACTCTTCTaGAAAATAGCGACGCATTCCCATTTTGAATCTCAT +
Preference number: 6 (lower is better)
Translates to: RCKFLRPEGLLF*KIATHSHFESH
Trigger: ATGAGATTCAAAATGGGAATGCGTCGCTATTTTTCAGAAGAGTAAGCCTTCTGGACGAAGGAATTTACACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000357759.9
ENST00000463019.7
ENST00000467282.5
ENST00000467761.5
ENST00000482430.5
ENST00000489514.6
ENST00000491820.5
ENST00000619531.4
CDS CAA 72 bp CATTTTGAATCTCATTATAGAAAAGGGATGTCCTGTTaGCATATCTGGGATCTTGGCTTTCCAAATGGTCAC +
Preference number: 6 (lower is better)
Translates to: HFESHYRKGMSC*HIWDLGFPNGH
Trigger: GTGACCATTTGGAAAGCCAAGATCCCAGATATGCAAACAGGACATCCCTTTTCTATAATGAGATTCAAAATG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000357759.9
ENST00000463019.7
ENST00000467282.5
ENST00000467761.5
ENST00000482430.5
ENST00000489514.6
ENST00000491820.5
ENST00000619531.4
CDS CAA 90 bp AGATCCATCAAATTCATAGAGAAGTCACTCTGGTTTATCAGCTCTTaGTTCCATGAGAATCGGGATTCATTGATAATTGTATTTTGTGAG +
Preference number: 6 (lower is better)
Translates to: RSIKFIEKSLWFISS*FHENRDSLIIVFCE
Trigger: CTCACAAAATACAATTATCAATGAATCCCGATTCTCATGGAACAAAGAGCTGATAAACCAGAGTGACTTCTCTATGAATTTGATGGATCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000357759.9
ENST00000467562.5
ENST00000467761.5
ENST00000482099.1
ENST00000489514.6
ENST00000491820.5
ENST00000619531.4