RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HHIPL1 (Homo sapiens)

Ensembl gene IDs: ENSG00000182218

Ensembl transcript IDs: ENST00000330710.10, ENST00000357223.2

Found 483 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCCCCACCCGTGCTCCCATCCGAGGCTGAGCGCAGTCATACTAAGTaGCCCTCTGCGGCCTGGCACAGAGCCAGGGCCGAGCATCCCTGG +
Preference number: 1 (lower is better)
Translates to: PPPVLPSEAERSHTK*PSAAWHRARAEHPW
Trigger: CCAGGGATGCTCGGCCCTGGCTCTGTGCCAGGCCGCAGAGGGGCACTTAGTATGACTGCGCTCAGCCTCGGATGGGAGCACGGGTGGGGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 90 bp AAGTGCCCCTCTGCGGCCTGGCACAGAGCCAGGGCCGAGCATCCCTaGAGTGAAGGAGCTTCCACCTGTGATGCAGGTGGGAAGCGGGAG +
Preference number: 1 (lower is better)
Translates to: KCPSAAWHRARAEHP*SEGASTCDAGGKRE
Trigger: CTCCCGCTTCCCACCTGCATCACAGGTGGAAGCTCCTTCACTCCAGGGATGCTCGGCCCTGGCTCTGTGCCAGGCCGCAGAGGGGCACTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 90 bp CTAGCAGCTAGGAGACCCTGCCAGACTCATGCCTGCCCCAAGGCCTaGCCAGCCACCCCTGGTGCCAGCTCCCAGAACTTGGCACAGCAT +
Preference number: 1 (lower is better)
Translates to: LAARRPCQTHACPKA*PATPGASSQNLAQH
Trigger: ATGCTGTGCCAAGTTCTGGGAGCTGGCACCAGGGGTGGCTGGGCAGGCCTTGGGGCAGGCATGAGTCTGGCAGGGTCTCCTAGCTGCTAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 90 bp CAAGCAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTaGTGCACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGC +
Preference number: 1 (lower is better)
Translates to: QAGPWLGCILEGLKA*CTFPGSSLSVASSG
Trigger: GCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTGCTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 90 bp CCTCAGGCCACCCTCCGGCTGTTCTTGCACCTTCCATTCCAGCTGTaGGCAGGACAAGCCTGGTTCTCCCCACCGCCCTCAGTCTGCAAG +
Preference number: 1 (lower is better)
Translates to: PQATLRLFLHLPFQL*AGQAWFSPPPSVCK
Trigger: CTTGCAGACTGAGGGCGGTGGGGAGAACCAGGCTTGTCCTGCCCACAGCTGGAATGGAAGGTGCAAGAACAGCCGGAGGGTGGCCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 90 bp GTACTGATGGGTGGCCTGTTAGGAACCGGGCCACACAGCAGGAGGTaGGTGGCAGTGGGGCAGGGTAGTGTGGGGAGCAAGCATTCCCAC +
Preference number: 1 (lower is better)
Translates to: VLMGGLLGTGPHSRR*VAVGQGSVGSKHSH
Trigger: GTGGGAATGCTTGCTCCCCACACTACCCTGCCCCACTGCCACTCACCTCCTGCTGTGTGGCCCGGTTCCTAACAGGCCACCCATCAGTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 90 bp CCAACACACACTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTaGAGCGCCTCACACATGTCCCCAGGACAGCACACACCCGCACCC +
Preference number: 1 (lower is better)
Translates to: PTHTPALGLQRTHMH*SASHMSPGQHTPAP
Trigger: GGGTGCGGGTGTGTGCTGTCCTGGGGACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAGTGTGTGTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 90 bp TTCCAGAGCCCACACCGCCCCCAACACACACTCCTGCCTTGGGTCTaGAGAGGACACACATGCACTGCAGCGCCTCACACATGTCCCCAG +
Preference number: 1 (lower is better)
Translates to: FQSPHRPQHTLLPWV*RGHTCTAAPHTCPQ
Trigger: CTGGGGACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAGTGTGTGTTGGGGGCGGTGTGGGCTCTGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 90 bp GGACCATGCACTTCCAGAGCCCACACCGCCCCCAACACACACTCCTaGCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACA +
Preference number: 1 (lower is better)
Translates to: GPCTSRAHTAPNTHS*LGSAEDTHALQRLT
Trigger: TGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAGTGTGTGTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 90 bp CAGGGTGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTaGGAGAATGGGCCTTGGTGCAAACCTGCCTCTAAAGCCCCGGGG +
Preference number: 1 (lower is better)
Translates to: QGGGAVSQGRRRIRL*ENGPWCKPASKAPG
Trigger: CCCCGGGGCTTTAGAGGCAGGTTTGCACCAAGGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCACCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 90 bp ACCGACTCACTGGAGGGCCAGGGTGAAAGCTCTGCCCAGCTAGTGTaGGTGGCTTCTGCCCCAAGAGCAAGAGAGAATCAGGCCTCAGGG +
Preference number: 1 (lower is better)
Translates to: TDSLEGQGESSAQLV*VASAPRARENQASG
Trigger: CCCTGAGGCCTGATTCTCTCTTGCTCTTGGGGCAGAAGCCACCCACACTAGCTGGGCAGAGCTTTCACCCTGGCCCTCCAGTGAGTCGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 90 bp CAGCGTGGCCTCATCTGGCAACAGGCCTGGGACACTCAGCCTCCCTaGGCTCACTTCCTCATCTGCACAGTGAGGAATTCGGCTGGGATG +
Preference number: 1 (lower is better)
Translates to: QRGLIWQQAWDTQPP*AHFLICTVRNSAGM
Trigger: CATCCCAGCCGAATTCCTCACTGTGCAGATGAGGAAGTGAGCTCAGGGAGGCTGAGTGTCCCAGGCCTGTTGCCAGATGAGGCCACGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 90 bp GAGTGGCAGTGGGGCAGGGTAGTGTGGGGAGCAAGCATTCCCACCTaGGCTCTGCCTCCTGCCAGATCAGCAGTGGCATTAGATCCGCAT +
Preference number: 1 (lower is better)
Translates to: EWQWGRVVWGASIPT*ALPPARSAVALDPH
Trigger: ATGCGGATCTAATGCCACTGCTGATCTGGCAGGAGGCAGAGCTCAGGTGGGAATGCTTGCTCCCCACACTACCCTGCCCCACTGCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 90 bp ATGCACTTCCAGAGCCCACACCGCCCCCAACACACACTCCTGCCTTaGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGT +
Preference number: 1 (lower is better)
Translates to: MHFQSPHRPQHTLLP*VCRGHTCTAAPHTC
Trigger: ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAGTGTGTGTTGGGGGCGGTGTGGGCTCTGGAAGTGCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 90 bp TCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCTTGGTaGAAACCTGCCTCTAAAGCCCCGGGGACCACTTACATAACACCC +
Preference number: 1 (lower is better)
Translates to: SQGRRRIRLWENGPW*KPASKAPGTTYITP
Trigger: GGGTGTTATGTAAGTGGTCCCCGGGGCTTTAGAGGCAGGTTTGCACCAAGGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 90 bp GGTCCCATCCCAGGAGCACCCACAAGGACTGAGTATGCTGCTGAGTaGCTTCTCCAGCATACGGCCTTGGAGGTCATCCAGTCCTCACAG +
Preference number: 1 (lower is better)
Translates to: GPIPGAPTRTEYAAE*LLQHTALEVIQSSQ
Trigger: CTGTGAGGACTGGATGACCTCCAAGGCCGTATGCTGGAGAAGCCACTCAGCAGCATACTCAGTCCTTGTGGGTGCTCCTGGGATGGGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 90 bp GGGACAGAGTCACATGTGAATGCTCCCTCAGCGGCCAGCTGTAGGTaGTGGAGTGAAAGAAGCACTGGACAGGCAGCCAGCTCTGCCCTT +
Preference number: 1 (lower is better)
Translates to: GTESHVNAPSAASCR*WSERSTGQAASSAL
Trigger: AAGGGCAGAGCTGGCTGCCTGTCCAGTGCTTCTTTCACTCCACCACCTACAGCTGGCCGCTGAGGGAGCATTCACATGTGACTCTGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 90 bp GGCATAAGAGGTGGCTCTGAATTGGCTGCCTTTACATGGGTGGCCTaGCAGGGTGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGG +
Preference number: 1 (lower is better)
Translates to: GIRGGSELAAFTWVA*QGGGAVSQGRRRIR
Trigger: CCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCACCCTGCCAGGCCACCCATGTAAAGGCAGCCAATTCAGAGCCACCTCTTATGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 90 bp ACAGAGTCACATGTGAATGCTCCCTCAGCGGCCAGCTGTAGGTGGTaGAGTGAAAGAAGCACTGGACAGGCAGCCAGCTCTGCCCTTCTC +
Preference number: 1 (lower is better)
Translates to: TESHVNAPSAASCRW*SERSTGQAASSALL
Trigger: GAGAAGGGCAGAGCTGGCTGCCTGTCCAGTGCTTCTTTCACTCCACCACCTACAGCTGGCCGCTGAGGGAGCATTCACATGTGACTCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 90 bp GTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCTTaGTGCAAACCTGCCTCTAAAGCCCCGGGGACCACTTACATAACA +
Preference number: 1 (lower is better)
Translates to: VSQGRRRIRLWENGP*CKPASKAPGTTYIT
Trigger: TGTTATGTAAGTGGTCCCCGGGGCTTTAGAGGCAGGTTTGCACCAAGGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 90 bp CCTGGGACACTCAGCCTCCCTGAGCTCACTTCCTCATCTGCACAGTaGGGAATTCGGCTGGGATGGTCATTAACGGCCTGCTATCTCCTA +
Preference number: 1 (lower is better)
Translates to: PGTLSLPELTSSSAQ*GIRLGWSLTACYLL
Trigger: TAGGAGATAGCAGGCCGTTAATGACCATCCCAGCCGAATTCCTCACTGTGCAGATGAGGAAGTGAGCTCAGGGAGGCTGAGTGTCCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 90 bp GCAGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTaGGCTTTCTGTCTAGGAAGCAACCTAGAGTGTACGTGCCATGCA +
Preference number: 1 (lower is better)
Translates to: ADSWLLPAWMPPASN*AFCLGSNLECTCHA
Trigger: TGCATGGCACGTACACTCTAGGTTGCTTCCTAGACAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 90 bp AGAGTTTCTTCCCATGTCATTCTGATGCTGGTCCTTCACGTGGCATaGCCCTCCTCACTCTGTCGCAGACAGTTGGCTGCTGCCAGCATG +
Preference number: 1 (lower is better)
Translates to: RVSSHVILMLVLHVA*PSSLCRRQLAAASM
Trigger: CATGCTGGCAGCAGCCAACTGTCTGCGACAGAGTGAGGAGGGGCATGCCACGTGAAGGACCAGCATCAGAATGACATGGGAAGAAACTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 90 bp AGGACTTTAAGGCAAGATCGGAGTCCCTGGGGACAGAGTCACATGTaGATGCTCCCTCAGCGGCCAGCTGTAGGTGGTGGAGTGAAAGAA +
Preference number: 1 (lower is better)
Translates to: RTLRQDRSPWGQSHM*MLPQRPAVGGGVKE
Trigger: TTCTTTCACTCCACCACCTACAGCTGGCCGCTGAGGGAGCATTCACATGTGACTCTGTCCCCAGGGACTCCGATCTTGCCTTAAAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 90 bp AGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCCCTGGGTaGAAAAGTGTCAGTAGTTTCACTGGACCCCCAGCCTGGTCAGCC +
Preference number: 1 (lower is better)
Translates to: RKVVCKQPHYWHSPG*KSVSSFTGPPAWSA
Trigger: GGCTGACCAGGCTGGGGGTCCAGTGAAACTACTGACACTTTTTCACCCAGGGCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 90 bp AGTTTCCCATTCTGTAAAGCACAGAGTATGAGGAGTCCAAGACAGTaGCCTAAAGCTTTCTGCTGCAGCCCAGGATCCTATACTAGTGGC +
Preference number: 1 (lower is better)
Translates to: SFPFCKAQSMRSPRQ*PKAFCCSPGSYTSG
Trigger: GCCACTAGTATAGGATCCTGGGCTGCAGCAGAAAGCTTTAGGTCACTGTCTTGGACTCCTCATACTCTGTGCTTTACAGAATGGGAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 90 bp TCCCAGAGCTGGACTACCTGGGCTCAAATTCAAATTTTGGCTATGTaGCATTTGGTAAGTGACAAATGCCCTGGAACTCGGCTTCCACGT +
Preference number: 1 (lower is better)
Translates to: SQSWTTWAQIQILAM*HLVSDKCPGTRLPR
Trigger: ACGTGGAAGCCGAGTTCCAGGGCATTTGTCACTTACCAAATGTCACATAGCCAAAATTTGAATTTGAGCCCAGGTAGTCCAGCTCTGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 90 bp AACATGAAACCTACTATGAACTGTGCATGCGAGGGATCTAGGCTGTaGACTCCTTATGAGAATCTAATGCCTGATGATCTGAGGTGGGAC +
Preference number: 1 (lower is better)
Translates to: NMKPTMNCACEGSRL*TPYENLMPDDLRWD
Trigger: GTCCCACCTCAGATCATCAGGCATTAGATTCTCATAAGGAGTTCACAGCCTAGATCCCTCGCATGCACAGTTCATAGTAGGTTTCATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 90 bp TGTCTAGGAAGCAACCTAGAGTGTACGTGCCATGCACGTCTGCAATaGTACCTCATTTTTCATCCAGTAATCCTTCTGGTGACCTCTATT +
Preference number: 1 (lower is better)
Translates to: CLGSNLECTCHARLQ*YLIFHPVILLVTSI
Trigger: AATAGAGGTCACCAGAAGGATTACTGGATGAAAAATGAGGTAGCATTGCAGACGTGCATGGCACGTACACTCTAGGTTGCTTCCTAGACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 90 bp GAACTGAGCTTTCTGTCTAGGAAGCAACCTAGAGTGTACGTGCCATaGACGTCTGCAATGCTACCTCATTTTTCATCCAGTAATCCTTCT +
Preference number: 1 (lower is better)
Translates to: ELSFLSRKQPRVYVP*TSAMLPHFSSSNPS
Trigger: AGAAGGATTACTGGATGAAAAATGAGGTAGCATTGCAGACGTGCATGGCACGTACACTCTAGGTTGCTTCCTAGACAGAAAGCTCAGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACAGCCTGCCCCTCCAGTaGGGCCCCAGGCCTGCAGCT +
Preference number: 2 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDSLPLQ*GPRPAA
Trigger: AGCTGCAGGCCTGGGGCCCCACTGGAGGGGCAGGCT...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCCACGTGTGCACCCGCTaGGCGCACACAGGGCGGAGC +
Preference number: 2 (lower is better)
Translates to: WRCCIPGKEKDPALGEWAHVCTR*AHTGRS
Trigger: GCTCCGCCCTGTGTGCGCCCAGCGGGTGCACACGTG...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR TCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGCCACACAGCAGGAGGTaGGTGGCAGTGGGGCAGGGT +
Preference number: 2 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGPHSRR*VAVGQG
Trigger: ACCCTGCCCCACTGCCACTCACCTCCTGCTGTGTGG...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGTCCTCCCTGAGCAGGTaGTGGCTCCTCCACGCAGCC +
Preference number: 2 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGSSLSR*WLLHAA
Trigger: GGCTGCGTGGAGGAGCCAGCACCTGCTCAGGGAGGA...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCCTGCCCAGCCACCCCTaGTGCCAGCTCCCAGAACTT +
Preference number: 2 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSLPSHP*CQLPEL
Trigger: AAGTTCTGGGAGCTGGCACCAGGGGTGGCTGGGCAG...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGGCTTCCCAGCCAGGCTaGCACTCCCACACCAGGCAG +
Preference number: 2 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGASQPG*HSHTRQ
Trigger: CTGCCTGGTGTGGGAGTGCCAGCCTGGCTGGGAAGC...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR TCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCCACAGCCATCCTCCCTaGGCAGGTGCTGGCTCCTCC +
Preference number: 2 (lower is better)
Translates to: WRCCIPGKEKDPALGEWAHSHPP*AGAGSS
Trigger: GGAGGAGCCAGCACCTGCTCAGGGAGGATGGCTGTG...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGAGGGTTGGAGGAGGCTaGTCCCATCCCAGGAGCACC +
Preference number: 2 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGRVGGG*SHPRST
Trigger: GGTGCTCCTGGGATGGGACCAGCCTCCTCCAACCCT...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACGAGCAGGGATGGGGATaGAAAGGACAGAGGTGGCCC +
Preference number: 2 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDEQGWG*KGQRWP
Trigger: GGGCCACCTCTGTCCTTTCCATCCCCATCCCTGCTC...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGCTGACCTGGGGACTGTaGAGTGAGTCCCCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGLTWGL*SESPGG
Trigger: GCCTCCTGGGGACTCACTCCACAGTCCCCAGGTCAG...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACCCCAACACACACTCCTaGCTTGGGTCTGCAGAGGAC +
Preference number: 2 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDPNTHS*LGSAED
Trigger: GTCCTCTGCAGACCCAAGGCAGGAGTGTGTGTTGGG...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCGCAGCTAGGAGACCCTaGCAGACTCATGCCTGCCCC +
Preference number: 2 (lower is better)
Translates to: WRCCIPGKEKDPALGEWAAARRP*QTHACP
Trigger: GGGGCAGGCATGAGTCTGGCAGGGTCTCCTAGCTGC...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp AGGAAGATGCCCACTCAACCTCCCCTGGGCCACTGGAGGCCCGAGAGGAGCATGTCTGCCCAGCTAGTGTaGGTGGCTTCTGCCCCAAGA +
Preference number: 2 (lower is better)
Translates to: RKMPTQPPLGHWRPERSMSAQLV*VASAPR
Trigger: TCTTGGGGCAGAAGCCACCCACACTAGCTGGGCAGA...CATGCTCCTCTCGGGCCTCCAGTGGCCCAGGGGAGGTTGAGTGGGCATCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGCCAGCTCCCAGAACTTaGCACAGCATCACCCCCTCC +
Preference number: 2 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGPAPRT*HSITPS
Trigger: GGAGGGGGTGATGCTGTGCCAAGTTCTGGGAGCTGG...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGCCTCCCCTGGGCCACTaGAGGCCCGAGAGGAGCATG +
Preference number: 2 (lower is better)
Translates to: RQLAAASMDATSLELSFLPPLGH*RPERSM
Trigger: CATGCTCCTCTCGGGCCTCCAGTGGCCCAGGGGAGG...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR TCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGAACTCCTCCCGCCCATaGTGGACCATGCACTTCCAG +
Preference number: 2 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGNSSRP*WTMHFQ
Trigger: CTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTT...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGGCCCATGATGGACCATaGACTTCCAGAGCCCACACC +
Preference number: 2 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGAHDGP*TSRAHT
Trigger: GGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGC...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACCCCTCCGGCTGTTCTTaGACCTTCCATTCCAGCTGT +
Preference number: 2 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDPSGCS*TFHSSC
Trigger: ACAGCTGGAATGGAAGGTGCAAGAACAGCCGGAGGG...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCCCCTTCCCCACTGGATaGCTTCCGGTTCTCTCCAGC +
Preference number: 2 (lower is better)
Translates to: WRCCIPGKEKDPALGEWAPFPTG*LPVLSS
Trigger: GCTGGAGAGAACCGGAAGGCATCCAGTGGGGAAGGG...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCCGCAGTCATACTAAGTaGCCCTCTGCGGCCTGGCAC +
Preference number: 2 (lower is better)
Translates to: WRCCIPGKEKDPALGEWARSHTK*PSAAWH
Trigger: GTGCCAGGCCGCAGAGGGGCACTTAGTATGACTGCG...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCGGCTGCTGTTCCTGCTaGTGTCTGAAACGCTTGGAG +
Preference number: 2 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSGCCSC*CLKRLE
Trigger: CTCCAAGCGTTTCAGACACCAGCAGGAACAGCAGCC...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCGAGTATGCTGCTGAGTaGCTTCTCCAGCATACGGCC +
Preference number: 2 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSEYAAE*LLQHTA
Trigger: GGCCGTATGCTGGAGAAGCCACTCAGCAGCATACTC...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGTGGAAAGGACAGAGGTaGCCCCAGGGCCCAAACACA +
Preference number: 2 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGWKGQR*PQGPNT
Trigger: TGTGTTTGGGCCCTGGGGCCACCTCTGTCCTTTCCA...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp GTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGCCTCTGCAGGACTCCCAGAGCAGCTaGGAGAGAGTCAGTCGTGTA +
Preference number: 2 (lower is better)
Translates to: VFLSLCSVPFPAPGRPLQDSQSS*ERVSRV
Trigger: TACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTC...CTGCAGAGGCCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
3UTR-3UTR GCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCACTCTAGAACACGTGTaGACCCGCTGGGCGCACACA +
Preference number: 2 (lower is better)
Translates to: WRCCIPGKEKDPALGEWATLEHV*TRWAHT
Trigger: TGTGTGCGCCCAGCGGGTGCACACGTGTTCTAGAGT...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGAGGACACACATGCACTaGAGCGCCTCACACATGTCC +
Preference number: 2 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGRTHMH*SASHMS
Trigger: GGACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCT...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGTGCAGAGGACACACATaGACTGCAGCGCCTCACACA +
Preference number: 2 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGCRGHT*TAAPHT
Trigger: TGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCA...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCCCCGGCTGCTGTTCCTaGTGGTGTCTGAAACGCTTG +
Preference number: 2 (lower is better)
Translates to: WRCCIPGKEKDPALGEWAPGCCS*WCLKRL
Trigger: CAAGCGTTTCAGACACCAGCAGGAACAGCAGCCGGG...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGGAGGGCCTCAAGGCTTaGTGCACCTTCCCTGGCTCC +
Preference number: 2 (lower is better)
Translates to: RQLAAASMDATSLELSFLEGLKA*CTFPGS
Trigger: GGAGCCAGGGAAGGTGCAGCAAGCCTTGAGGCCCTC...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGCTTTCCCTTCCCCACTaGATGCCTTCCGGTTCTCTC +
Preference number: 2 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGLSLPH*MPSGSL
Trigger: GAGAGAACCGGAAGGCATCCAGTGGGGAAGGGAAAG...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGGGGAGGAAGAGCGCCTaGCCTGGAAGACTGAAGGCC +
Preference number: 2 (lower is better)
Translates to: RQLAAASMDATSLELSFLGRKSA*PGRLKA
Trigger: GGCCTTCAGTCTTCCAGGCCAGGCGCTCTTCCTCCC...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CAA 90 bp AGGGTCCCACAGCCCGGCTGCTGTTCCTGCTGGTGTCTGAAACGCTaGGAGGTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCA +
Preference number: 2 (lower is better)
Translates to: RVPQPGCCSCWCLKR*EVRKELLPPMMDHA
Trigger: TGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTACCTCCAAGCGTTTCAGACACCAGCAGGAACAGCAGCCGGGCTGTGGGACCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGCCAGTGGGGTGGGGCTaGCTTTCAATGCCCTTGAGG +
Preference number: 2 (lower is better)
Translates to: RQLAAASMDATSLELSFLPVGWG*LSMPLR
Trigger: CCTCAAGGGCATTGAAAGCCAGCCCCACCCCACTGG...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCGCTCAGTCTAGGGCCTaGGATGTTGTGACCTCTGAC +
Preference number: 2 (lower is better)
Translates to: WRCCIPGKEKDPALGEWAAQSRA*DVVTSD
Trigger: GTCAGAGGTCACAACATCCCAGGCCCTAGACTGAGC...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CAA 90 bp ACAAGGACTGAGTATGCTGCTGAGTGGCTTCTCCAGCATACGGCCTaGGAGGTCATCCAGTCCTCACAGCCATCCTCCCTGAGCAGGTGC +
Preference number: 2 (lower is better)
Translates to: TRTEYAAEWLLQHTA*EVIQSSQPSSLSRC
Trigger: GCACCTGCTCAGGGAGGATGGCTGTGAGGACTGGATGACCTCCAAGGCCGTATGCTGGAGAAGCCACTCAGCAGCATACTCAGTCCTTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR TCA 90 bp AGGAAGATGCCCACTCAACCTCCCCTGGGCCACTGGAGGCCCGAGAGGAGCATGTGGCATAGCCCTGGGTaGAAAAGTGTCAGTAGTTTC +
Preference number: 2 (lower is better)
Translates to: RKMPTQPPLGHWRPERSMWHSPG*KSVSSF
Trigger: GAAACTACTGACACTTTTTCACCCAGGGCTATGCCA...CATGCTCCTCTCGGGCCTCCAGTGGCCCAGGGGAGGTTGAGTGGGCATCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR TCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGAGGAGTCCAAGACAGTaGCCTAAAGCTTTCTGCTGC +
Preference number: 2 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGRSPRQ*PKAFCC
Trigger: GCAGCAGAAAGCTTTAGGTCACTGTCTTGGACTCCT...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR TCA 90 bp AGGAAGATGCCCACTCAACCTCCCCTGGGCCACTGGAGGCCCGAGAGGAGCATGTGCTGTATTCAAACTTaGCTTCTCCCTTCCCTGGCT +
Preference number: 2 (lower is better)
Translates to: RKMPTQPPLGHWRPERSMCCIQT*LLPSLA
Trigger: AGCCAGGGAAGGGAGAAGTCAAGTTTGAATACAGCA...CATGCTCCTCTCGGGCCTCCAGTGGCCCAGGGGAGGTTGAGTGGGCATCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCACATCCTGTCTTCACTaGCTGGTGACTCATCTGCTT +
Preference number: 2 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSTSCLH*LVTHLL
Trigger: AAGCAGATGAGTCACCAGGCAGTGAAGACAGGATGT...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp ATTCATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGGAGGGCAACGTGGGTTaGGGAAGGTGCTTGAAGAGG +
Preference number: 2 (lower is better)
Translates to: IHQVFLSLCSVPFPAPGREGNVG*GRCLKR
Trigger: CCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTC...CCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
3UTR-3UTR CCA 90 bp TTTATTCATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGGGCTGGACAGAGGCCTaGAGGGCAACGTGGGTTGGG +
Preference number: 2 (lower is better)
Translates to: FIHQVFLSLCSVPFPAPGGWTEA*RATWVG
Trigger: CCCAACCCACGTTGCCCTCCAGGCCTCTGTCCAGCC...CCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATGAATAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357223.2
3UTR-3UTR GCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCGCGGGCACCAGGCCATaGTGTCCGGGCCACATTCCT +
Preference number: 2 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSAGTRP*CPGHIP
Trigger: AGGAATGTGGCCCGGACAGCATGGCCTGGTGCCCGC...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGCCTAAAGCTTTCTGCTaGAGCCCAGGATCCTATACT +
Preference number: 2 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGPKAFC*SPGSYT
Trigger: AGTATAGGATCCTGGGCTGCAGCAGAAAGCTTTAGG...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCTCCGTCCTCGAAGCCTaGCTGCCCTCCCTCCTCAGG +
Preference number: 2 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSSVLEA*LPSLLR
Trigger: CCTGAGGAGGGAGGGCAGCCAGGCTTCGAGGACGGA...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCAGGAATCAGGTCTCCTaGGTTTACACTGAGCAGGGA +
Preference number: 2 (lower is better)
Translates to: WRCCIPGKEKDPALGEWARNQVS*VYTEQG
Trigger: TCCCTGCTCAGTGTAAACCCAGGAGACCTGATTCCT...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR TCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCGTAAAGCACAGAGTATaGGGAGTCCAAGACAGTGAC +
Preference number: 2 (lower is better)
Translates to: WRCCIPGKEKDPALGEWAVKHRV*GVQDSD
Trigger: GTCACTGTCTTGGACTCCTCATACTCTGTGCTTTAC...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGCCTGATGATCTGAGGTaGGACATTTCATCCCAAAAC +
Preference number: 2 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGPDDLR*DISSQN
Trigger: GTTTTGGGATGAAATGTCCCACCTCAGATCATCAGG...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGAACCTAGAGTGTACGTaGCATGCACGTCTGCAATGC +
Preference number: 2 (lower is better)
Translates to: RQLAAASMDATSLELSFLNLECT*HARLQC
Trigger: GCATTGCAGACGTGCATGGCACGTACACTCTAGGTT...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCCTCCTCCACGCAGCCTaGCCCTCCAGTGGGGCCCCA +
Preference number: 2 (lower is better)
Translates to: TSFKPPCFMLITLCQALFLLHAA*PSSGAP
Trigger: TGGGGCCCCACTGGAGGGGCAGGCTGCGTGGAGGAG...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCAGCAGCGGGGGCACCTaGCAGGCAAGAGGAGCCCCC +
Preference number: 2 (lower is better)
Translates to: TSFKPPCFMLITLCQALFSSGGT*QARGAP
Trigger: GGGGGCTCCTCTTGCCTGGCAGGTGCCCCCGCTGCT...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCAGGAGCTCTTTCTTCTaGTATTGTGAGAGTTTCTTC +
Preference number: 2 (lower is better)
Translates to: WRCCIPGKEKDPALGEWARSSFF*YCESFF
Trigger: GAAGAAACTCTCACAATAGCAGAAGAAAGAGCTCCT...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGTATCTAACCTCTGTGTaGCTCAGTTTCCCATTCTGT +
Preference number: 2 (lower is better)
Translates to: RQLAAASMDATSLELSFLYLTSV*LSFPFC
Trigger: ACAGAATGGGAAACTGAGGCACACAGAGGTTAGATA...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp GAGGATTACATGAGTGAATGGTATGTTAAACTTTCAGAGCAGTGCTTGGCATGTCAGCGTGGCCTCATCTaGCAACAGGCCTGGGACACT +
Preference number: 2 (lower is better)
Translates to: EDYMSEWYVKLSEQCLACQRGLI*QQAWDT
Trigger: AGTGTCCCAGGCCTGTTGCCAGATGAGGCCACGCTG...ACATGCCAAGCACTGCTCTGAAAGTTTAACATACCATTCACTCATGTAATCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR TCA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCGCTCGGCTGCATTCTTaGGGGCCTCAAGGCTTGCTG +
Preference number: 2 (lower is better)
Translates to: TSFKPPCFMLITLCQALFARLHS*GPQGLL
Trigger: CAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGC...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR GCA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCGGCCAAAGCCCGAACTaGCCAGAGAAGTACTGGAGG +
Preference number: 2 (lower is better)
Translates to: TSFKPPCFMLITLCQALFGQSPN*PEKYWR
Trigger: CCTCCAGTACTTCTCTGGGCAGTTCGGGCTTTGGCC...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp GAGGATTACATGAGTGAATGGTATGTTAAACTTTCAGAGCAGTGCTTGGCATGTTTCCAACCCCCGACATaGGCCACATCCTGTCTTCAC +
Preference number: 2 (lower is better)
Translates to: EDYMSEWYVKLSEQCLACFQPPT*ATSCLH
Trigger: GTGAAGACAGGATGTGGCCCATGTCGGGGGTTGGAA...ACATGCCAAGCACTGCTCTGAAAGTTTAACATACCATTCACTCATGTAATCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR TCA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCCTCCTGGGTTTACACTaGGCAGGGATGGGGATGGAA +
Preference number: 2 (lower is better)
Translates to: TSFKPPCFMLITLCQALFLLGLH*AGMGME
Trigger: TTCCATCCCCATCCCTGCTCAGTGTAAACCCAGGAG...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CCA 90 bp GAGGATTACATGAGTGAATGGTATGTTAAACTTTCAGAGCAGTGCTTGGCATGTCTCCCTTCCCTGGCTTaGTGCCCTAAGATATCTAAC +
Preference number: 2 (lower is better)
Translates to: EDYMSEWYVKLSEQCLACLPSLA*CPKISN
Trigger: GTTAGATATCTTAGGGCACCAAGCCAGGGAAGGGAG...ACATGCCAAGCACTGCTCTGAAAGTTTAACATACCATTCACTCATGTAATCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 72 bp CGCACCCCCTTCACTCTAGAACACGTGTGCACCCGCTaGGCGCACACAGGGCGGAGCGGCCCCTGCCAGGCT +
Preference number: 3 (lower is better)
Translates to: RTPFTLEHVCTR*AHTGRSGPCQA
Trigger: AGCCTGGCAGGGGCCGCTCCGCCCTGTGTGCGCCCAGCGGGTGCACACGTGTTCTAGAGTGAAGGGGGTGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 72 bp CCCAGGAAGATGCCCACTCAACCTCCCCTGGGCCACTaGAGGCCCGAGAGGAGCATGAGGCCAGCAGCGGGG +
Preference number: 3 (lower is better)
Translates to: PRKMPTQPPLGH*RPERSMRPAAG
Trigger: CCCCGCTGCTGGCCTCATGCTCCTCTCGGGCCTCCAGTGGCCCAGGGGAGGTTGAGTGGGCATCTTCCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 72 bp GTGCTCCCATCCGAGGCTGAGCGCAGTCATACTAAGTaGCCCTCTGCGGCCTGGCACAGAGCCAGGGCCGAG +
Preference number: 3 (lower is better)
Translates to: VLPSEAERSHTK*PSAAWHRARAE
Trigger: CTCGGCCCTGGCTCTGTGCCAGGCCGCAGAGGGGCACTTAGTATGACTGCGCTCAGCCTCGGATGGGAGCAC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 72 bp CCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTaGTGCACCTTCCCTGGCTCCAGTCTCAGCGTGGCC +
Preference number: 3 (lower is better)
Translates to: PWLGCILEGLKA*CTFPGSSLSVA
Trigger: GGCCACGCTGAGACTGGAGCCAGGGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 72 bp TCTGCGGCCTGGCACAGAGCCAGGGCCGAGCATCCCTaGAGTGAAGGAGCTTCCACCTGTGATGCAGGTGGG +
Preference number: 3 (lower is better)
Translates to: SAAWHRARAEHP*SEGASTCDAGG
Trigger: CCCACCTGCATCACAGGTGGAAGCTCCTTCACTCCAGGGATGCTCGGCCCTGGCTCTGTGCCAGGCCGCAGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CAA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACCCCCATAGGTTGGGTTaGGGTGCCCCACCCAGACCT +
Preference number: 3 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDPHRLG*GAPPRP
Trigger: AGGTCTGGGTGGGGCACCCAAACCCAACCTATGGGG...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 72 bp CAAAGCCCGAACTGCCCAGAGAAGTACTGGAGGGCCTaGGGCCGCACCCAGAGCTCCCTTTGCCAACCCTCC +
Preference number: 3 (lower is better)
Translates to: QSPNCPEKYWRA*GRTQSSLCQPS
Trigger: GGAGGGTTGGCAAAGGGAGCTCTGGGTGCGGCCTCAGGCCCTCCAGTACTTCTCTGGGCAGTTCGGGCTTTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 72 bp AGGCTTGCTGCACCTTCCCTGGCTCCAGTCTCAGCGTaGCCTCATCTGGCAACAGGCCTGGGACACTCAGCC +
Preference number: 3 (lower is better)
Translates to: RLAAPSLAPVSA*PHLATGLGHSA
Trigger: GGCTGAGTGTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTGCAGCAAGCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 72 bp GGAGGCTGGGGAGGAAGAGCGCCTGGCCTGGAAGACTaGAGGCCAAAGCCCGAACTGCCCAGAGAAGTACTG +
Preference number: 3 (lower is better)
Translates to: GGWGGRAPGLED*RPKPELPREVL
Trigger: CAGTACTTCTCTGGGCAGTTCGGGCTTTGGCCTTCAGTCTTCCAGGCCAGGCGCTCTTCCTCCCCAGCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 72 bp TGGCTAGGAGACCCTATACTAGCAGCTAGGAGACCCTaGCAGACTCATGCCTGCCCCAAGGCCTGCCCAGCC +
Preference number: 3 (lower is better)
Translates to: WLGDPILAARRP*QTHACPKACPA
Trigger: GGCTGGGCAGGCCTTGGGGCAGGCATGAGTCTGGCAGGGTCTCCTAGCTGCTAGTATAGGGTCTCCTAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 72 bp GGCATGCCCCTCCTCACTCTGTCGCAGACAGTTGGCTaGTGCCAGCATGGATGCCACCAGCCTCGAACTGAG +
Preference number: 3 (lower is better)
Translates to: GMPLLTLSQTVG*CQHGCHQPRTE
Trigger: CTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCTGCGACAGAGTGAGGAGGGGCATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 72 bp ACGTGGCATGCCCCTCCTCACTCTGTCGCAGACAGTTaGCTGCTGCCAGCATGGATGCCACCAGCCTCGAAC +
Preference number: 3 (lower is better)
Translates to: TWHAPPHSVADS*LLPAWMPPASN
Trigger: GTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCTGCGACAGAGTGAGGAGGGGCATGCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CAA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGCTCCAGCATACGGCCTaGGAGGTCATCCAGTCCTCA +
Preference number: 3 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGLQHTA*EVIQSS
Trigger: TGAGGACTGGATGACCTCCAAGGCCGTATGCTGGAG...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 72 bp GGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCTTaGTGCAAACCTGCCTCTAAAGCCCCGGGGACCACT +
Preference number: 3 (lower is better)
Translates to: GRRRIRLWENGP*CKPASKAPGTT
Trigger: AGTGGTCCCCGGGGCTTTAGAGGCAGGTTTGCACCAAGGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 72 bp CCAGAGCTCCCTTTGCCAACCCTCCTAATCCAGCTCTaGGCAAAACAGCTTCTGGGGCCAGGCAAGCAGGGC +
Preference number: 3 (lower is better)
Translates to: PELPLPTLLIQL*AKQLLGPGKQG
Trigger: GCCCTGCTTGCCTGGCCCCAGAAGCTGTTTTGCTCAGAGCTGGATTAGGAGGGTTGGCAAAGGGAGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 72 bp AGGCAAGATCGGAGTCCCTGGGGACAGAGTCACATGTaGATGCTCCCTCAGCGGCCAGCTGTAGGTGGTGGA +
Preference number: 3 (lower is better)
Translates to: RQDRSPWGQSHM*MLPQRPAVGGG
Trigger: TCCACCACCTACAGCTGGCCGCTGAGGGAGCATTCACATGTGACTCTGTCCCCAGGGACTCCGATCTTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 72 bp ACTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTaGAGCGCCTCACACATGTCCCCAGGACAGCACACA +
Preference number: 3 (lower is better)
Translates to: TPALGLQRTHMH*SASHMSPGQHT
Trigger: TGTGTGCTGTCCTGGGGACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 72 bp ATGCCCCTCCTCACTCTGTCGCAGACAGTTGGCTGCTaGCAGCATGGATGCCACCAGCCTCGAACTGAGCTT +
Preference number: 3 (lower is better)
Translates to: MPLLTLSQTVGC*QHGCHQPRTEL
Trigger: AAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCTGCGACAGAGTGAGGAGGGGCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 72 bp CTGGAGGGCCAGGGTGAAAGCTCTGCCCAGCTAGTGTaGGTGGCTTCTGCCCCAAGAGCAAGAGAGAATCAG +
Preference number: 3 (lower is better)
Translates to: LEGQGESSAQLV*VASAPRARENQ
Trigger: CTGATTCTCTCTTGCTCTTGGGGCAGAAGCCACCCACACTAGCTGGGCAGAGCTTTCACCCTGGCCCTCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CAA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGCTGCTGTATTCAAACTaGACTTCTCCCTTCCCTGGC +
Preference number: 3 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGLLYSN*TSPFPG
Trigger: GCCAGGGAAGGGAGAAGTCAAGTTTGAATACAGCAG...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 72 bp CCAGGAGCACCCACAAGGACTGAGTATGCTGCTGAGTaGCTTCTCCAGCATACGGCCTTGGAGGTCATCCAG +
Preference number: 3 (lower is better)
Translates to: PGAPTRTEYAAE*LLQHTALEVIQ
Trigger: CTGGATGACCTCCAAGGCCGTATGCTGGAGAAGCCACTCAGCAGCATACTCAGTCCTTGTGGGTGCTCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 72 bp CATGTGAATGCTCCCTCAGCGGCCAGCTGTAGGTGGTaGAGTGAAAGAAGCACTGGACAGGCAGCCAGCTCT +
Preference number: 3 (lower is better)
Translates to: HVNAPSAASCRW*SERSTGQAASS
Trigger: AGAGCTGGCTGCCTGTCCAGTGCTTCTTTCACTCCACCACCTACAGCTGGCCGCTGAGGGAGCATTCACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CCA 72 bp TCACATGTGAATGCTCCCTCAGCGGCCAGCTGTAGGTaGTGGAGTGAAAGAAGCACTGGACAGGCAGCCAGC +
Preference number: 3 (lower is better)
Translates to: SHVNAPSAASCR*WSERSTGQAAS
Trigger: GCTGGCTGCCTGTCCAGTGCTTCTTTCACTCCACCACCTACAGCTGGCCGCTGAGGGAGCATTCACATGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CAA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGGGCCCAAACACAGCTTaGAAAGTAGTGGAGGCCCAC +
Preference number: 3 (lower is better)
Translates to: RQLAAASMDATSLELSFLGPNTA*KVVEAH
Trigger: GTGGGCCTCCACTACTTTCAAAGCTGTGTTTGGGCC...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CAA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCCTTTCAGAGCAGTGCTaGGCATGTAGTAAGCGCTCA +
Preference number: 3 (lower is better)
Translates to: WRCCIPGKEKDPALGEWALSEQC*ACSKRS
Trigger: TGAGCGCTTACTACATGCCAAGCACTGCTCTGAAAG...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 72 bp GCTCAGTCTAGGGCCTGGGATGTTGTGACCTCTGACTaGTGTCTTGAACACAGTCCTGGACACTGGGCCACC +
Preference number: 3 (lower is better)
Translates to: AQSRAWDVVTSD*CLEHSPGHWAT
Trigger: GGTGGCCCAGTGTCCAGGACTGTGTTCAAGACATCAGTCAGAGGTCACAACATCCCAGGCCCTAGACTGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 72 bp GTGACCCCTAGGCTCAGTCTAGGGCCTGGGATGTTGTaGCCTCTGACTGATGTCTTGAACACAGTCCTGGAC +
Preference number: 3 (lower is better)
Translates to: VTPRLSLGPGML*PLTDVLNTVLD
Trigger: GTCCAGGACTGTGTTCAAGACATCAGTCAGAGGTCACAACATCCCAGGCCCTAGACTGAGCCTAGGGGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 72 bp TGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTaGGCTTTCTGTCTAGGAAGCAACCTAGAGTGTACG +
Preference number: 3 (lower is better)
Translates to: WLLPAWMPPASN*AFCLGSNLECT
Trigger: CGTACACTCTAGGTTGCTTCCTAGACAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CAA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCCAGTTTCCAGCTTCCTaGAACCTCCCAAACATTTCT +
Preference number: 3 (lower is better)
Translates to: WRCCIPGKEKDPALGEWAQFPAS*NLPNIS
Trigger: AGAAATGTTTGGGAGGTTCAAGGAAGCTGGAAACTG...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR-3UTR CAA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGTGGTGTCTGAAACGCTaGGAGGTAAGAAAGGAACTC +
Preference number: 3 (lower is better)
Translates to: RQLAAASMDATSLELSFLWCLKR*EVRKEL
Trigger: GAGTTCCTTTCTTACCTCCAAGCGTTTCAGACACCA...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 72 bp GGAGGGGCGAGGGGACAGAAGCGCGACAAGAAGACTTaGGTTCTACATGTTAGGCTGAAGGAGCTCTTTCTT +
Preference number: 3 (lower is better)
Translates to: GGARGQKRDKKT*VLHVRLKELFL
Trigger: AAGAAAGAGCTCCTTCAGCCTAACATGTAGAACTCAAGTCTTCTTGTCGCGCTTCTGTCCCCTCGCCCCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 72 bp GTGTGTAAACAGCCACATTATTGGCATAGCCCTGGGTaGAAAAGTGTCAGTAGTTTCACTGGACCCCCAGCC +
Preference number: 3 (lower is better)
Translates to: VCKQPHYWHSPG*KSVSSFTGPPA
Trigger: GGCTGGGGGTCCAGTGAAACTACTGACACTTTTTCACCCAGGGCTATGCCAATAATGTGGCTGTTTACACAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 72 bp AGCAACCTAGAGTGTACGTGCCATGCACGTCTGCAATaGTACCTCATTTTTCATCCAGTAATCCTTCTGGTG +
Preference number: 3 (lower is better)
Translates to: SNLECTCHARLQ*YLIFHPVILLV
Trigger: CACCAGAAGGATTACTGGATGAAAAATGAGGTAGCATTGCAGACGTGCATGGCACGTACACTCTAGGTTGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 72 bp CCTACTATGAACTGTGCATGCGAGGGATCTAGGCTGTaGACTCCTTATGAGAATCTAATGCCTGATGATCTG +
Preference number: 3 (lower is better)
Translates to: PTMNCACEGSRL*TPYENLMPDDL
Trigger: CAGATCATCAGGCATTAGATTCTCATAAGGAGTTCACAGCCTAGATCCCTCGCATGCACAGTTCATAGTAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR TCA 72 bp CCCAGCAACCTGTGTTTTAAGCAGCCCTGTAGAACTTaGTTCTTCTCAAGCTTGAAACCCACTGGTGTAGAT +
Preference number: 3 (lower is better)
Translates to: PSNLCFKQPCRT*FFSSLKPTGVD
Trigger: ATCTACACCAGTGGGTTTCAAGCTTGAGAAGAATCAAGTTCTACAGGGCTGCTTAAAACACAGGTTGCTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 72 bp ACAGTAGCAGGGACAAACTGCATAAGGGCTAACAATTaGTTCCCTCCTTTGTTCAGGTGTCCTCTCACTATT +
Preference number: 3 (lower is better)
Translates to: TVAGTNCIRANN*FPPLFRCPLTI
Trigger: AATAGTGAGAGGACACCTGAACAAAGGAGGGAAGCAATTGTTAGCCCTTATGCAGTTTGTCCCTGCTACTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 72 bp TACATGAGTGAATGGTATGTTAAACTTTCAGAGCAGTaGTTGGCATGTAGTAAGCGCTCAGCAGAGGTCAGC +
Preference number: 3 (lower is better)
Translates to: YMSEWYVKLSEQ*LACSKRSAEVS
Trigger: GCTGACCTCTGCTGAGCGCTTACTACATGCCAAGCACTGCTCTGAAAGTTTAACATACCATTCACTCATGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR GCA 72 bp TTTCTGTCTAGGAAGCAACCTAGAGTGTACGTGCCATaGACGTCTGCAATGCTACCTCATTTTTCATCCAGT +
Preference number: 3 (lower is better)
Translates to: FLSRKQPRVYVP*TSAMLPHFSSS
Trigger: ACTGGATGAAAAATGAGGTAGCATTGCAGACGTGCATGGCACGTACACTCTAGGTTGCTTCCTAGACAGAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACGGCCCGAGAGGAGCATaGGGCCAGCAGCGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNGPRGA*GQQRGH
Trigger: GTGCCCCCGCTGCTGGCCTCATGCTCCTCTCGGGCC...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp ACACACCCGCACCCCCTTCACTCTAGAACACGTGTGCACCCGCTGGGCGCACACGCCGGCGGGATGGCCTaGGGCAGCGGCGTGTTGCCT +
Preference number: 4 (lower is better)
Translates to: THPHPLHSRTRVHPLGAHAGGMA*GSGVLP
Trigger: AGGCAACACGCCGCTGCCCCAGGCCATCCCGCCGGC...GTGTGCGCCCAGCGGGTGCACACGTGTTCTAGAGTGAAGGGGGTGCGGGTGTGT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACCGACGGCGGCGCCGCTaGTGTTCCAGGAGTCGTCGC +
Preference number: 4 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDRRRRR*CSRSRR
Trigger: GCGACGACTCCTGGAACATCAGCGGCGCCGCCGTCG...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCCTGAAGTCCAGGCACTaGGGATGCGCGGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSLKSRH*GCAAAP
Trigger: CGGGGCCGCCGCGCATCCGCAGTGCCTGGACTTCAG...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACCTCCTCCACGCAGCCTaGCCCTCCAGTGGGGCCCCA +
Preference number: 4 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNLLHAA*PSSGAP
Trigger: TGGGGCCCCACTGGAGGGGCAGGCTGCGTGGAGGAG...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCCACGTGTGCACCCGCTaGGCGCACACAGGGCGGAGC +
Preference number: 4 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSHVCTR*AHTGRS
Trigger: GCTCCGCCCTGTGTGCGCCCAGCGGGTGCACACGTG...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp AGGAAGATGCCCACTCAACCTCCCCTGGGCCACTGGAGGCCCGAGAGGAGCATGCGAACTCGGCTCTCTTaGCGGCGCGCACGGCGTAGG +
Preference number: 4 (lower is better)
Translates to: RKMPTQPPLGHWRPERSMRTRLS*RRARRR
Trigger: CCTACGCCGTGCGCGCCGTCAAGAGAGCCGAGTTCG...CATGCTCCTCTCGGGCCTCCAGTGGCCCAGGGGAGGTTGAGTGGGCATCTTCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACAGTCGTCGCACACGGTaGCCCAGCGTCCGCCCACGA +
Preference number: 4 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNSRRTR*PSVRPR
Trigger: TCGTGGGCGGACGCTGGGGCACCGTGTGCGACGACT...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCCCCTGGCATGGACCATaGCCACGGGGTTGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSPWHGP*PRGCAA
Trigger: GGCTGCGCAACCCCGTGGCCATGGTCCATGCCAGGG...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACGGCAGCGAGCCGCCCTaGCCGAACTCGGCTCTCTTG +
Preference number: 4 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNGSEPP*PNSALL
Trigger: CAAGAGAGCCGAGTTCGGCCAGGGCGGCTCGCTGCC...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGAGCCTGCCCCTCCAGTaGGGCCCCAGGCCTGCAGCT +
Preference number: 4 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGSLPLQ*GPRPAA
Trigger: AGCTGCAGGCCTGGGGCCCCACTGGAGGGGCAGGCT...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGGCCGGAAGGGCGGCCTaGAGTCCAGGCACTGCGGAT +
Preference number: 4 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGAGRAA*SPGTAD
Trigger: ATCCGCAGTGCCTGGACTTCAGGCCGCCCTTCCGGC...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp GCTGGACAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTGCCGGAAGGGCGGCCTaGAGTCCAGGCACTGCGGAT +
Preference number: 4 (lower is better)
Translates to: AGQRPGGQRGLGKVLEEGAGRAA*SPGTAD
Trigger: ATCCGCAGTGCCTGGACTTCAGGCCGCCCTTCCGGC...ACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTGTCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR TCA 90 bp AGGAAGATGCCCACTCAACCTCCCCTGGGCCACTGGAGGCCCGAGAGGAGCATGCCACACAGCAGGAGGTaGGTGGCAGTGGGGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RKMPTQPPLGHWRPERSMPHSRR*VAVGQG
Trigger: ACCCTGCCCCACTGCCACTCACCTCCTGCTGTGTGG...CATGCTCCTCTCGGGCCTCCAGTGGCCCAGGGGAGGTTGAGTGGGCATCTTCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp CATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGCCTGGTTGTCGGGCGGGATaGCGTAGGGCAGGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: HQVFLSLCSVPFPAPGRPGCRAG*RRAGRA
Trigger: AGCGCGGCCTGCCCTACGGCATCCCGCCCGACAACC...AGGCCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGCGCGCCAGCCATAGTTaGCGCCGCGCTCCACCACGT +
Preference number: 4 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGRASHS*RRAPPR
Trigger: ACGTGGTGGAGCGCGGCGGCAACTATGGCTGGCGCG...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp ACACACCCGCACCCCCTTCACTCTAGAACACGTGTGCACCCGCTGGGCGCACACCGGGGTTCTGGTGGCTaGACACGACGCCCGCATCCT +
Preference number: 4 (lower is better)
Translates to: THPHPLHSRTRVHPLGAHRGSGG*TRRPHP
Trigger: AGGATGCGGGCGTCGTGTGCAGCCACCAGAACCCCG...GTGTGCGCCCAGCGGGTGCACACGTGTTCTAGAGTGAAGGGGGTGCGGGTGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp ACACACCCGCACCCCCTTCACTCTAGAACACGTGTGCACCCGCTGGGCGCACACTCCTCGAAGCCTGGCTaGCCTCCCTCCTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: THPHPLHSRTRVHPLGAHSSKPG*PPSSGS
Trigger: GGACCCTGAGGAGGGAGGGCAGCCAGGCTTCGAGGA...GTGTGCGCCCAGCGGGTGCACACGTGTTCTAGAGTGAAGGGGGTGCGGGTGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACCATCGTCCAGCAGAATaGGCAGCGAGCCGCCCTGGC +
Preference number: 4 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDHRPAE*AASRPG
Trigger: GCCAGGGCGGCTCGCTGCCCATTCTGCTGGACGATG...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACCCCACGCCGTTGTGCTaGCACTCCAGCAGGTTCCGC +
Preference number: 4 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDPTPLC*HSSRFR
Trigger: GCGGAACCTGCTGGAGTGCCAGCACAACGGCGTGGG...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGCCTCCCCTGGGCCACTaGAGGCCCGAGAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGPPLGH*RPERSM
Trigger: CATGCTCCTCTCGGGCCTCCAGTGGCCCAGGGGAGG...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp ACACACCCGCACCCCCTTCACTCTAGAACACGTGTGCACCCGCTGGGCGCACACCCACTCAACCTCCCCTaGGCCACTGGAGGCCCGAGA +
Preference number: 4 (lower is better)
Translates to: THPHPLHSRTRVHPLGAHPLNLP*ATGGPR
Trigger: TCTCGGGCCTCCAGTGGCCCAGGGGAGGTTGAGTGG...GTGTGCGCCCAGCGGGTGCACACGTGTTCTAGAGTGAAGGGGGTGCGGGTGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGAAGTACTGGAGGGCCTaGGGCCGCACCCAGAGCTCC +
Preference number: 4 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGKYWRA*GRTQSS
Trigger: GGAGCTCTGGGTGCGGCCTCAGGCCCTCCAGTACTT...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp CTGAGACTCCCAGAGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTACCCTGAAGTCCAGGCACTaGGGATGCGCGGCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: LRLPEQLGESQSCSPGITLKSRH*GCAAAP
Trigger: CGGGGCCGCCGCGCATCCGCAGTGCCTGGACTTCAG...GGTAATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTCTCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp AGGAAGATGCCCACTCAACCTCCCCTGGGCCACTGGAGGCCCGAGAGGAGCATGCGATGCGCAGCACCTTaGCCAGCAGCGCCGACTTGT +
Preference number: 4 (lower is better)
Translates to: RKMPTQPPLGHWRPERSMRCAAP*PAAPTC
Trigger: ACAAGTCGGCGCTGCTGGGCAAGGTGCTGCGCATCG...CATGCTCCTCTCGGGCCTCCAGTGGCCCAGGGGAGGTTGAGTGGGCATCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTGGTTGTCGGGCGGGATaGCGTAGGGCAGGCCGCGCT +
Preference number: 4 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCGCRAG*RRAGRA
Trigger: AGCGCGGCCTGCCCTACGGCATCCCGCCCGACAACC...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGGCTCGCAGTTGTGGGTaGCCACGCCGTTGTGCTGGC +
Preference number: 4 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGARSCG*PRRCAG
Trigger: GCCAGCACAACGGCGTGGGCACCCACAACTGCGAGC...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGGCGGGCACCAGGCCATaGTGTCCGGGCCACATTCCT +
Preference number: 4 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGAGTRP*CPGHIP
Trigger: AGGAATGTGGCCCGGACAGCATGGCCTGGTGCCCGC...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp AGGAAGATGCCCACTCAACCTCCCCTGGGCCACTGGAGGCCCGAGAGGAGCATGGAGGGCCTCAAGGCTTaGTGCACCTTCCCTGGCTCC +
Preference number: 4 (lower is better)
Translates to: RKMPTQPPLGHWRPERSMEGLKA*CTFPGS
Trigger: GGAGCCAGGGAAGGTGCAGCAAGCCTTGAGGCCCTC...CATGCTCCTCTCGGGCCTCCAGTGGCCCAGGGGAGGTTGAGTGGGCATCTTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACTACGGCGAGCATTCCTaGCACAGCAGGTCCCTCGCG +
Preference number: 4 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNYGEHS*HSRSLA
Trigger: CGCGAGGGACCTGCTGTGCCAGGAATGCTCGCCGTA...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGCCTCTGCAGTACGGCGAGCATTCCTaGCACAGCAGGTCCCTCGCG +
Preference number: 4 (lower is better)
Translates to: VFLSLCSVPFPAPGRPLQYGEHS*HSRSLA
Trigger: CGCGAGGGACCTGCTGTGCCAGGAATGCTCGCCGTA...CTGCAGAGGCCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp GTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGCCTCTGCAGGCGCAGGGGCGTGAATaGGTCCTCGGCGTCATAGAG +
Preference number: 4 (lower is better)
Translates to: VFLSLCSVPFPAPGRPLQAQGRE*VLGVIE
Trigger: CTCTATGACGCCGAGGACCCATTCACGCCCCTGCGC...CTGCAGAGGCCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp GCTGGACAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTGCTGCAGGCAGCCCTTaGCATCGGCTACCACGTGGC +
Preference number: 4 (lower is better)
Translates to: AGQRPGGQRGLGKVLEEGAAGSP*HRLPRG
Trigger: GCCACGTGGTAGCCGATGCCAAGGGCTGCCTGCAGC...ACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTGTCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACAGGGTTGGAGGAGGCTaGTCCCATCCCAGGAGCACC +
Preference number: 4 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDRVGGG*SHPRST
Trigger: GGTGCTCCTGGGATGGGACCAGCCTCCTCCAACCCT...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp ACACACCCGCACCCCCTTCACTCTAGAACACGTGTGCACCCGCTGGGCGCACACGCAAGCATTCCCACCTaGGCTCTGCCTCCTGCCAGA +
Preference number: 4 (lower is better)
Translates to: THPHPLHSRTRVHPLGAHASIPT*ALPPAR
Trigger: TCTGGCAGGAGGCAGAGCTCAGGTGGGAATGCTTGC...GTGTGCGCCCAGCGGGTGCACACGTGTTCTAGAGTGAAGGGGGTGCGGGTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCGGCTTTCAATGCCCTTaGGGTGGCCCAGCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSGFQCP*GGPAGR
Trigger: CCTTCCTGCTGGGCCACCTCAAGGGCATTGAAAGCC...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp GTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGCCTCTGCAGGCGGCCTCTGCAGAGTaGAGAGATACAGGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: VFLSLCSVPFPAPGRPLQAASAE*RDTGLA
Trigger: GGCCAAGCCTGTATCTCTTCACTCTGCAGAGGCCGC...CTGCAGAGGCCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp CTGAGACTCCCAGAGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTACCCCGAAGTCCGAGTACTaGGCGCAGAGGCGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: LRLPEQLGESQSCSPGITPKSEY*AQRRSG
Trigger: GCCGCTGCGCCTCTGCGCGCAGTACTCGGACTTCGG...GGTAATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTCTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp ACACACCCGCACCCCCTTCACTCTAGAACACGTGTGCACCCGCTGGGCGCACACAGAACCTGGCAAGGTTaGCCTCCAGCGCCCAGAGCT +
Preference number: 4 (lower is better)
Translates to: THPHPLHSRTRVHPLGAHRTWQG*PPAPRA
Trigger: AGCTCTGGGCGCTGGAGGGCAACCTTGCCAGGTTCT...GTGTGCGCCCAGCGGGTGCACACGTGTTCTAGAGTGAAGGGGGTGCGGGTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCGCTGGATCTGACATTTaGCAGGTGGTGCCCGCCTGG +
Preference number: 4 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSAGSDI*QVVPAW
Trigger: CCAGGCGGGCACCACCTGGCAAATGTCAGATCCAGC...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCGGGGCAGCGGCGTGTTaGCTACAGGTCGGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: WRCCIPGKEKDPALGEWAGAAAC*LQVGVL
Trigger: CAGAACCCCGACCTGTAGGCAACACGCCGCTGCCCC...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCGGCCTCAAGGCTTGCTaGACCTTCCCTGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSGLKAC*TFPGSS
Trigger: ACTGGAGCCAGGGAAGGTGCAGCAAGCCTTGAGGCC...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGGCGCAGGGGCGTGAATaGGTCCTCGGCGTCATAGAG +
Preference number: 4 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGAQGRE*VLGVIE
Trigger: CTCTATGACGCCGAGGACCCATTCACGCCCCTGCGC...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGGGTAGCGGCAGAACCTaGCAAGGTTGCCCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGGSGRT*QGCPPA
Trigger: CGCTGGAGGGCAACCTTGCCAGGTTCTGCCGCTACC...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGGTGCCATCCCTGGCATaGACCATGGCCACGGGGTTG +
Preference number: 4 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGVPSLA*TMATGL
Trigger: CAACCCCGTGGCCATGGTCCATGCCAGGGATGGCAC...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACAGCCTGCGGTTGTGCTaGAAGCTGGGGTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDSLRLC*KLGWKA
Trigger: TGCCTTCCACCCCAGCTTCCAGCACAACCGCAGGCT...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GCTGGACAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTAGAGGCCGTTCAGGTTaGGGTACTCGCAGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: AGQRPGGQRGLGKVLEEGRGRSG*GTRSPG
Trigger: ACCGGGGCTGCGAGTACCCCAACCTGAACGGCCTCT...ACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTGTCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACGTCCCTGGGTTCTCTTaGAGGGACATCAGACGCCCG +
Preference number: 4 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNVPGFS*RDIRRP
Trigger: CGGGCGTCTGATGTCCCTCCAAGAGAACCCAGGGAC...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACCCCATAGGTTGGGTTTaGGTGCCCCACCCAGACCTC +
Preference number: 4 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNPIGWV*VPHPDL
Trigger: GAGGTCTGGGTGGGGCACCCAAACCCAACCTATGGG...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGCTGCCCAGCCACCCCTaGTGCCAGCTCCCAGAACTT +
Preference number: 4 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGLPSHP*CQLPEL
Trigger: AAGTTCTGGGAGCTGGCACCAGGGGTGGCTGGGCAG...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp ACACACCCGCACCCCCTTCACTCTAGAACACGTGTGCACCCGCTGGGCGCACACTGGGGACCACTGACCTaGGGACTGTGGAGTGAGTCC +
Preference number: 4 (lower is better)
Translates to: THPHPLHSRTRVHPLGAHWGPLT*GLWSES
Trigger: GGACTCACTCCACAGTCCCCAGGTCAGTGGTCCCCA...GTGTGCGCCCAGCGGGTGCACACGTGTTCTAGAGTGAAGGGGGTGCGGGTGTGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCTCAATGCCCTTGAGGTaGCCCAGCAGGAAGGCCCAC +
Preference number: 4 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSSMPLR*PSRKAH
Trigger: GTGGGCCTTCCTGCTGGGCCACCTCAAGGGCATTGA...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp AGGAAGATGCCCACTCAACCTCCCCTGGGCCACTGGAGGCCCGAGAGGAGCATGCCAGTGGGGTGGGGCTaGCTTTCAATGCCCTTGAGG +
Preference number: 4 (lower is better)
Translates to: RKMPTQPPLGHWRPERSMPVGWG*LSMPLR
Trigger: CCTCAAGGGCATTGAAAGCCAGCCCCACCCCACTGG...CATGCTCCTCTCGGGCCTCCAGTGGCCCAGGGGAGGTTGAGTGGGCATCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACAAAGCTAGTTCTCAGTaGGGGAGGAGGGGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDKASSQ*GRRGEG
Trigger: CCCCTCGCCCCTCCTCCCCCACTGAGAACTAGCTTT...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GCCCTGAGACTCCCAGAGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTGGCTGGACAGAGGCCTaGAGGGCAACGTGGGTTGGG +
Preference number: 4 (lower is better)
Translates to: ALRLPEQLGESQSCSPGIGWTEA*RATWVG
Trigger: CCCAACCCACGTTGCCCTCCAGGCCTCTGTCCAGCC...AATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTCTCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR TCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGCCGTGCGCAGGGGCGTaGATGGGTCCTCGGCGTCAT +
Preference number: 4 (lower is better)
Translates to: RQLAAASMDATSLELSFLPCAGA*MGPRRH
Trigger: ATGACGCCGAGGACCCATTCACGCCCCTGCGCACGG...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp ATTCATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGCCGTGCGCAGGGGCGTaGATGGGTCCTCGGCGTCAT +
Preference number: 4 (lower is better)
Translates to: IHQVFLSLCSVPFPAPGRPCAGA*MGPRRH
Trigger: ATGACGCCGAGGACCCATTCACGCCCCTGCGCACGG...CCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATGAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR TCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCTGGTCAGTTGACAGGTaGCGGAACAGCCCCCGGCAC +
Preference number: 4 (lower is better)
Translates to: WRCCIPGKEKDPALGEWAWSVDR*RNSPRH
Trigger: GTGCCGGGGGCTGTTCCGTCACCTGTCAACTGACCA...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCGCCCCCGTTGTGGTTTaGGGCTGGTTCTTTGACCTC +
Preference number: 4 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSAPVVV*GWFFDL
Trigger: GAGGTCAAAGAACCAGCCTCAAACCACAACGGGGGC...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp GCCCTGAGACTCCCAGAGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTGCTCCCCTGTCGACATaGAGTACAGCTCCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: ALRLPEQLGESQSCSPGIAPLST*STAPRP
Trigger: AGGCCGGGGAGCTGTACTTCATGTCGACAGGGGAGC...AATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTCTCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR TCA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACAACTCCTCCCGCCCATaGTGGACCATGCACTTCCAG +
Preference number: 4 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNNSSRP*WTMHFQ
Trigger: CTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTT...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGAGGAGCTTCCACCTGTaGTGCAGGTGGGAAGCGGGA +
Preference number: 4 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGRSFHL*CRWEAG
Trigger: TCCCGCTTCCCACCTGCATCACAGGTGGAAGCTCCT...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGCCTGGCCTGGAAGACTaGAGGCCAAAGCCCGAACTG +
Preference number: 4 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGPGLED*RPKPEL
Trigger: CAGTTCGGGCTTTGGCCTTCAGTCTTCCAGGCCAGG...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGGCCTGGTTTGGGGCCTaGGAGGTGATGAGTTGGAGG +
Preference number: 4 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGAWFGA*EVMSWR
Trigger: CCTCCAACTCATCACCTCTCAGGCCCCAAACCAGGC...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACGGACAGAGTCACATGTaGATGCTCCCTCAGCGGCCA +
Preference number: 4 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNGQSHM*MLPQRP
Trigger: TGGCCGCTGAGGGAGCATTCACATGTGACTCTGTCC...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp GCTGGACAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTATACAGGCTTGGCCCTaGGACTCCCAGAGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: AGQRPGGQRGLGKVLEEGIQAWP*DSQSSW
Trigger: CCAGCTGCTCTGGGAGTCTCAGGGCCAAGCCTGTAT...ACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGCGAAGAAGCGGTGGGTaGCATCCCTGGCATGGACCA +
Preference number: 4 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGRRSGG*HPWHGP
Trigger: TGGTCCATGCCAGGGATGGCACCCACCGCTTCTTCG...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp GCTGGACAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTCGAAGAAGCGGTGGGTaGCATCCCTGGCATGGACCA +
Preference number: 4 (lower is better)
Translates to: AGQRPGGQRGLGKVLEEGRRSGG*HPWHGP
Trigger: TGGTCCATGCCAGGGATGGCACCCACCGCTTCTTCG...ACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp GGACAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTGAGTACGGTCCACGTCGATaGGCAGCACCTTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: GQRPGGQRGLGKVLEEGEYGPRR*AAPCPA
Trigger: TGCTGGGCAAGGTGCTGCGCATCGACGTGGACCGTA...CTCACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTGTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCAGCAGCGCCACATGTTaGGCACGCCCAGGGCGTAGA +
Preference number: 4 (lower is better)
Translates to: WRCCIPGKEKDPALGEWASSATC*ARPGRR
Trigger: TCTACGCCCTGGGCGTGCGCAACATGTGGCGCTGCT...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp GCCCTGAGACTCCCAGAGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTAGCAGCGCCACATGTTaGGCACGCCCAGGGCGTAGA +
Preference number: 4 (lower is better)
Translates to: ALRLPEQLGESQSCSPGISSATC*ARPGRR
Trigger: TCTACGCCCTGGGCGTGCGCAACATGTGGCGCTGCT...AATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTCTCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp AGGAAGATGCCCACTCAACCTCCCCTGGGCCACTGGAGGCCCGAGAGGAGCATGGCCCATGATGGACCATaGACTTCCAGAGCCCACACC +
Preference number: 4 (lower is better)
Translates to: RKMPTQPPLGHWRPERSMAHDGP*TSRAHT
Trigger: GGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGC...CATGCTCCTCTCGGGCCTCCAGTGGCCCAGGGGAGGTTGAGTGGGCATCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACCCCGGCTGCTGTTCCTaGTGGTGTCTGAAACGCTTG +
Preference number: 4 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNPGCCS*WCLKRL
Trigger: CAAGCGTTTCAGACACCAGCAGGAACAGCAGCCGGG...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp AGGAAGATGCCCACTCAACCTCCCCTGGGCCACTGGAGGCCCGAGAGGAGCATGGGCCAAAGCCCGAACTaGCCAGAGAAGTACTGGAGG +
Preference number: 4 (lower is better)
Translates to: RKMPTQPPLGHWRPERSMGQSPN*PEKYWR
Trigger: CCTCCAGTACTTCTCTGGGCAGTTCGGGCTTTGGCC...CATGCTCCTCTCGGGCCTCCAGTGGCCCAGGGGAGGTTGAGTGGGCATCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp ACACACCCGCACCCCCTTCACTCTAGAACACGTGTGCACCCGCTGGGCGCACACTCGCAGACAGTTGGCTaGTGCCAGCATGGATGCCAC +
Preference number: 4 (lower is better)
Translates to: THPHPLHSRTRVHPLGAHSQTVG*CQHGCH
Trigger: GTGGCATCCATGCTGGCAGCAGCCAACTGTCTGCGA...GTGTGCGCCCAGCGGGTGCACACGTGTTCTAGAGTGAAGGGGGTGCGGGTGTGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp GTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGCCTCTGCAGCACCTGGGCGGCCTCTaGAGAGTGAAGAGATACAGG +
Preference number: 4 (lower is better)
Translates to: VFLSLCSVPFPAPGRPLQHLGGL*RVKRYR
Trigger: CCTGTATCTCTTCACTCTGCAGAGGCCGCCCAGGTG...CTGCAGAGGCCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp GCCCTGAGACTCCCAGAGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTGTGCCATCCCTGGCATaGACCATGGCCACGGGGTTG +
Preference number: 4 (lower is better)
Translates to: ALRLPEQLGESQSCSPGIVPSLA*TMATGL
Trigger: CAACCCCGTGGCCATGGTCCATGCCAGGGATGGCAC...AATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTCTCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp GCCCTGAGACTCCCAGAGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTGCCACGAAGAAGCGGTaGGTGCCATCCCTGGCATGG +
Preference number: 4 (lower is better)
Translates to: ALRLPEQLGESQSCSPGIATKKR*VPSLAW
Trigger: CCATGCCAGGGATGGCACCCACCGCTTCTTCGTGGC...AATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTCTCAGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCAGAGGCCGTTCAGGTTaGGGTACTCGCAGCCCCGGT +
Preference number: 4 (lower is better)
Translates to: WRCCIPGKEKDPALGEWARGRSG*GTRSPG
Trigger: ACCGGGGCTGCGAGTACCCCAACCTGAACGGCCTCT...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGGAGCAGGGATGGGGATaGAAAGGACAGAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGEQGWG*KGQRWP
Trigger: GGGCCACCTCTGTCCTTTCCATCCCCATCCCTGCTC...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACATGCCCCTCTGCGGCCTaGCACAGAGCCAGGGCCGAG +
Preference number: 4 (lower is better)
Translates to: VRKELLPPMMDHALPEPTCPSAA*HRARAE
Trigger: CTCGGCCCTGGCTCTGTGCCAGGCCGCAGAGGGGCA...TGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACTTGGCTGCCTTTACATaGGTGGCCTGGCAGGGTGGA +
Preference number: 4 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDLAAFT*VAWQGG
Trigger: TCCACCCTGCCAGGCCACCCATGTAAAGGCAGCCAA...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTGAGGTGCGGGCATGGCGCTTCTaGCCTTACAGCTGGATGCGT +
Preference number: 4 (lower is better)
Translates to: QRPGGQRGLGKVLEEGEVRAWRF*PYSWMR
Trigger: ACGCATCCAGCTGTAAGGCCAGAAGCGCCATGCCCG...CACCTCACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp GCTGGACAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTGGACATAGCCGGGCATaGCGCTTCTGGCCTTACAGC +
Preference number: 4 (lower is better)
Translates to: AGQRPGGQRGLGKVLEEGGHSRA*RFWPYS
Trigger: GCTGTAAGGCCAGAAGCGCCATGCCCGGCTATGTCC...ACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTGTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR TCA 90 bp GCCCTGAGACTCCCAGAGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTGAGCTCCTGGTCAGTTaGCAGGTGACGGAACAGCCC +
Preference number: 4 (lower is better)
Translates to: ALRLPEQLGESQSCSPGIELLVS*QVTEQP
Trigger: GGGCTGTTCCGTCACCTGTCAACTGACCAGGAGCTC...AATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTCTCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR TCA 90 bp CAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTGAGGTGGCCCCCGTTGTGGTTTaGGGCTGGTTCTTTGACCTC +
Preference number: 4 (lower is better)
Translates to: QRPGGQRGLGKVLEEGEVAPVVV*GWFFDL
Trigger: GAGGTCAAAGAACCAGCCTCAAACCACAACGGGGGC...CACCTCACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR TCA 90 bp CATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGCCTACACGTAGCCCCCTGTaGCCGACTTGCCAACCGTGT +
Preference number: 4 (lower is better)
Translates to: HQVFLSLCSVPFPAPGRPTRSPL*PTCQPC
Trigger: ACACGGTTGGCAAGTCGGTCACAGGGGGCTACGTGT...AGGCCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR TCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGCACAGCCATCCTCCCTaGGCAGGTGCTGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RQLAAASMDATSLELSFLHSHPP*AGAGSS
Trigger: GGAGGAGCCAGCACCTGCTCAGGGAGGATGGCTGTG...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACGGGCCTGGGATGTTGTaGCCTCTGACTGATGTCTTG +
Preference number: 4 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDGPGML*PLTDVL
Trigger: CAAGACATCAGTCAGAGGTCACAACATCCCAGGCCC...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACCCACCAGCCTCGAACTaGGCTTTCTGTCTAGGAAGC +
Preference number: 4 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNPPASN*AFCLGS
Trigger: GCTTCCTAGACAGAAAGCTCAGTTCGAGGCTGGTGG...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp GTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGCCTCTGCAGAGTAGACGTAGAGCCTaGGGTTGTGCTGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: VFLSLCSVPFPAPGRPLQSRRRA*GCAGSW
Trigger: CCAGCTTCCAGCACAACCGCAGGCTCTACGTCTACT...CTGCAGAGGCCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCTGTTGGCGCACAGGCTaGGGTCGTAGCACTCGAACC +
Preference number: 4 (lower is better)
Translates to: WRCCIPGKEKDPALGEWACWRTG*GRSTRT
Trigger: GGTTCGAGTGCTACGACCGCAGCCTGTGCGCCAACA...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGTCTGGCCGTGGCCCATaGAGATCTCACTGTACTGCC +
Preference number: 4 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGSGRGP*RSHCTA
Trigger: GGCAGTACAGTGAGATCTGCATGGGCCACGGCCAGA...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACACATTTGCCAGGTGGTaGCCGCCTGGATGCGTCAAT +
Preference number: 4 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDTFARW*PPGCVN
Trigger: ATTGACGCATCCAGGCGGGCACCACCTGGCAAATGT...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACAGGACACACATGCACTaGAGCGCCTCACACATGTCC +
Preference number: 4 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNRTHMH*SASHMS
Trigger: GGACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCT...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GGACAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTGAGGCATCGGCTACCACGTaGCCCAGGTTTGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: GQRPGGQRGLGKVLEEGEASATT*PRFELR
Trigger: CCTCAACTCAAACCTGGGCCACGTGGTAGCCGATGC...CTCACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTGTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp GCTGGACAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTTCCTCGAACTTGTTCTaGCCCACGTCGCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: AGQRPGGQRGLGKVLEEGSSNLF*PTSPQK
Trigger: CTTCTGCGGCGACGTGGGCCAGAACAAGTTCGAGGA...ACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTGTCCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCGGGAACTCACAGGTCTaGCCGTGGCCCATGCAGATC +
Preference number: 4 (lower is better)
Translates to: WRCCIPGKEKDPALGEWAGNSQV*PWPMQI
Trigger: GATCTGCATGGGCCACGGCCAGACCTGTGAGTTCCC...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTTCGTGCTCGCAGTTGTaGGTGCCCACGCCGTTGTGC +
Preference number: 4 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCSCSQL*VPTPLC
Trigger: GCACAACGGCGTGGGCACCCACAACTGCGAGCACGA...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGAGGTCGGGGTTCTGGTaGCTGCACACGACGCCCGCA +
Preference number: 4 (lower is better)
Translates to: RQLAAASMDATSLELSFLRSGFW*LHTTPA
Trigger: TGCGGGCGTCGTGTGCAGCCACCAGAACCCCGACCT...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTTACAGGTCGGGGTTCTaGTGGCTGCACACGACGCCC +
Preference number: 4 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCYRSGF*WLHTTP
Trigger: GGGCGTCGTGTGCAGCCACCAGAACCCCGACCTGTA...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACGGCTGCTGTTCCTGCTaGTGTCTGAAACGCTTGGAG +
Preference number: 4 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDGCCSC*CLKRLE
Trigger: CTCCAAGCGTTTCAGACACCAGCAGGAACAGCAGCC...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCTTGCTGCACCTTCCCTaGCTCCAGTCTCAGCGTGGC +
Preference number: 4 (lower is better)
Translates to: WRCCIPGKEKDPALGEWALLHLP*LQSQRG
Trigger: GCCACGCTGAGACTGGAGCCAGGGAAGGTGCAGCAA...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCTCTGTCGCAGACAGTTaGCTGCTGCCAGCATGGATG +
Preference number: 4 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSSVADS*LLPAWM
Trigger: CATCCATGCTGGCAGCAGCCAACTGTCTGCGACAGA...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGAGAAGGATCCGGCTCTaGGAGAATGGGCCTTGGTGC +
Preference number: 4 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGRRIRL*ENGPWC
Trigger: GCACCAAGGCCCATTCTCCCAGAGCCGGATCCTTCT...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp ACACACCCGCACCCCCTTCACTCTAGAACACGTGTGCACCCGCTGGGCGCACACTTTACATGGGTGGCCTaGCAGGGTGGAGGTGCTGTA +
Preference number: 4 (lower is better)
Translates to: THPHPLHSRTRVHPLGAHFTWVA*QGGGAV
Trigger: TACAGCACCTCCACCCTGCCAGGCCACCCATGTAAA...GTGTGCGCCCAGCGGGTGCACACGTGTTCTAGAGTGAAGGGGGTGCGGGTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp CAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTGAGGTGGCTGCGGATACCCACTaGGTAGTAGACGTAGAGCCT +
Preference number: 4 (lower is better)
Translates to: QRPGGQRGLGKVLEEGEVAADTH*VVDVEP
Trigger: AGGCTCTACGTCTACTACTCAGTGGGTATCCGCAGC...CACCTCACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp ACACACCCGCACCCCCTTCACTCTAGAACACGTGTGCACCCGCTGGGCGCACACGGATCCACTCACTGCTaGGGATACCCACTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: THPHPLHSRTRVHPLGAHGSTHC*GYPLSS
Trigger: ACTACTCAGTGGGTATCCGCAGCAGTGAGTGGATCC...GTGTGCGCCCAGCGGGTGCACACGTGTTCTAGAGTGAAGGGGGTGCGGGTGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGTGCGGATCCACTCACTaGTGCGGATACCCACTGAGT +
Preference number: 4 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGCGSTH*CGYPLS
Trigger: ACTCAGTGGGTATCCGCAGCAGTGAGTGGATCCGCA...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp AGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTACCAAGTCTGAGTGATCGCGCCAGCCATAGTTaGCGCCGCGCTCCACCACGT +
Preference number: 4 (lower is better)
Translates to: SSWERVSRVAQGLPSLSDRASHS*RRAPPR
Trigger: ACGTGGTGGAGCGCGGCGGCAACTATGGCTGGCGCG...ATCACTCAGACTTGGTAATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGGTCCCACAGCCCGGCTaGTGTTCCTGCTGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: RQLAAASMDATSLELSFLVPQPG*CSCWCL
Trigger: CAGACACCAGCAGGAACAGCAGCCGGGCTGTGGGAC...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTCGCAGTCATACTAAGTaGCCCTCTGCGGCCTGGCAC +
Preference number: 4 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCRSHTK*PSAAWH
Trigger: GTGCCAGGCCGCAGAGGGGCACTTAGTATGACTGCG...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGGGGCAGTGGTTAGGGTaGGGGGACTCTAAACTAAGC +
Preference number: 4 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGGQWLG*GDSKLS
Trigger: GCTTAGTTTAGAGTCCCCGCACCCTAACCACTGCCC...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
60% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTACACTGGGCCACCCCTaGAGCATTGACCCTGAGGCT +
Preference number: 4 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCTLGHP*SIDPEA
Trigger: AGCCTCAGGGTCAATGCTGCAGGGGTGGCCCAGTGT...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCCAGACAGTTGGCTGCTaGCAGCATGGATGCCACCAG +
Preference number: 4 (lower is better)
Translates to: WRCCIPGKEKDPALGEWAQTVGC*QHGCHQ
Trigger: CTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCTG...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp AGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTACCAAGTCTGAGTGATCCCTGGCATGGACCATaGCCACGGGGTTGCGCAGCC +
Preference number: 4 (lower is better)
Translates to: SSWERVSRVAQGLPSLSDPWHGP*PRGCAA
Trigger: GGCTGCGCAACCCCGTGGCCATGGTCCATGCCAGGG...ATCACTCAGACTTGGTAATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp CAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTGAGGTGATCCTCTCAGAGCTGTaGTCCACGGCGTTCTCGTCA +
Preference number: 4 (lower is better)
Translates to: QRPGGQRGLGKVLEEGEVILSEL*STAFSS
Trigger: TGACGAGAACGCCGTGGACCACAGCTCTGAGAGGAT...CACCTCACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp CTGAGACTCCCAGAGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTACCGGGAACTCACAGGTCTaGCCGTGGCCCATGCAGATC +
Preference number: 4 (lower is better)
Translates to: LRLPEQLGESQSCSPGITGNSQV*PWPMQI
Trigger: GATCTGCATGGGCCACGGCCAGACCTGTGAGTTCCC...GGTAATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp CAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTGAGGTGGTTGTTGATGAGGCCTaGGAACTCACAGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: QRPGGQRGLGKVLEEGEVVVDEA*ELTGLA
Trigger: GGCCAGACCTGTGAGTTCCCAGGCCTCATCAACAAC...CACCTCACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTGTAGACAACTCCGCGTaGAGCTGTGGCACTCGGCTC +
Preference number: 4 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCVDNSA*SCGTRL
Trigger: GAGCCGAGTGCCACAGCTCCACGCGGAGTTGTCTAC...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTCTGACATTTGCCAGGTaGTGCCCGCCTGGATGCGTC +
Preference number: 4 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCLTFAR*CPPGCV
Trigger: GACGCATCCAGGCGGGCACCACCTGGCAAATGTCAG...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGCACACACTCCTGCCTTaGGTCTGCAGAGGACACACA +
Preference number: 4 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGHTLLP*VCRGHT
Trigger: TGTGTGTCCTCTGCAGACCCAAGGCAGGAGTGTGTG...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTAGGGCCGAGCATCCCTaGAGTGAAGGAGCTTCCACC +
Preference number: 4 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCRAEHP*SEGAST
Trigger: GGTGGAAGCTCCTTCACTCCAGGGATGCTCGGCCCT...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGAGCTGGGGAGGGCAGTaGTTAGGGTGCGGGGACTCT +
Preference number: 4 (lower is better)
Translates to: RQLAAASMDATSLELSFLSWGGQ*LGCGDS
Trigger: AGAGTCCCCGCACCCTAACCACTGCCCTCCCCAGCT...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTAGGCAAGCAGGGCCCTaGCTCGGCTGCATTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCRQAGP*LGCILE
Trigger: CTCAAGAATGCAGCCGAGCCAGGGCCCTGCTTGCCT...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGCTGACCTGGGGACTGTaGAGTGAGTCCCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: RQLAAASMDATSLELSFLLTWGL*SESPGG
Trigger: GCCTCCTGGGGACTCACTCCACAGTCCCCAGGTCAG...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACGAGGTGGCTCTGAATTaGCTGCCTTTACATGGGTGG +
Preference number: 4 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDEVALN*LPLHGW
Trigger: CCACCCATGTAAAGGCAGCCAATTCAGAGCCACCTC...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGGAGCTCCTGGTCAGTTaGCAGGTGACGGAACAGCCC +
Preference number: 4 (lower is better)
Translates to: RQLAAASMDATSLELSFLELLVS*QVTEQP
Trigger: GGGCTGTTCCGTCACCTGTCAACTGACCAGGAGCTC...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGACACGTAGCCCCCTGTaGCCGACTTGCCAACCGTGT +
Preference number: 4 (lower is better)
Translates to: RQLAAASMDATSLELSFLTRSPL*PTCQPC
Trigger: ACACGGTTGGCAAGTCGGTCACAGGGGGCTACGTGT...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGCCTCCCCGAAGGAGATaGTGTACGGGTAGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGPPRRR*CTGSSC
Trigger: ACAACTACTACCCGTACATCATCTCCTTCGGGGAGG...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp GCTGGACAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTCCTCCCCGAAGGAGATaGTGTACGGGTAGTAGTTGT +
Preference number: 4 (lower is better)
Translates to: AGQRPGGQRGLGKVLEEGPPRRR*CTGSSC
Trigger: ACAACTACTACCCGTACATCATCTCCTTCGGGGAGG...ACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTGTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR TCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCCTCCTGGGTTTACACTaGGCAGGGATGGGGATGGAA +
Preference number: 4 (lower is better)
Translates to: WRCCIPGKEKDPALGEWALLGLH*AGMGME
Trigger: TTCCATCCCCATCCCTGCTCAGTGTAAACCCAGGAG...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp ACACACCCGCACCCCCTTCACTCTAGAACACGTGTGCACCCGCTGGGCGCACACAGGAGTCCAAGACAGTaGCCTAAAGCTTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: THPHPLHSRTRVHPLGAHRSPRQ*PKAFCC
Trigger: GCAGCAGAAAGCTTTAGGTCACTGTCTTGGACTCCT...GTGTGCGCCCAGCGGGTGCACACGTGTTCTAGAGTGAAGGGGGTGCGGGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp CAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTGAGGTGGGATCCACTCACTGCTaGGGATACCCACTGAGTAGT +
Preference number: 4 (lower is better)
Translates to: QRPGGQRGLGKVLEEGEVGSTHC*GYPLSS
Trigger: ACTACTCAGTGGGTATCCGCAGCAGTGAGTGGATCC...CACCTCACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp GCCCTGAGACTCCCAGAGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTTGCGGATCCACTCACTaGTGCGGATACCCACTGAGT +
Preference number: 4 (lower is better)
Translates to: ALRLPEQLGESQSCSPGICGSTH*CGYPLS
Trigger: ACTCAGTGGGTATCCGCAGCAGTGAGTGGATCCGCA...AATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTCTCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGTACGGTCCACGTCGATaGGCAGCACCTTGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RQLAAASMDATSLELSFLYGPRR*AAPCPA
Trigger: TGCTGGGCAAGGTGCTGCGCATCGACGTGGACCGTA...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCTGCAGAGGACACACATaGACTGCAGCGCCTCACACA +
Preference number: 4 (lower is better)
Translates to: WRCCIPGKEKDPALGEWACRGHT*TAAPHT
Trigger: TGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCA...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp GTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACAGCAGCTAGGAGACCCTaGCAGACTCATGCCTGCCCC +
Preference number: 4 (lower is better)
Translates to: VRKELLPPMMDHALPEPTAARRP*QTHACP
Trigger: GGGGCAGGCATGAGTCTGGCAGGGTCTCCTAGCTGC...TGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp ACACACCCGCACCCCCTTCACTCTAGAACACGTGTGCACCCGCTGGGCGCACACCCTTCCCTGGCTTGGTaGCCTAAGATATCTAACCTC +
Preference number: 4 (lower is better)
Translates to: THPHPLHSRTRVHPLGAHPSLAW*PKISNL
Trigger: GAGGTTAGATATCTTAGGGCACCAAGCCAGGGAAGG...GTGTGCGCCCAGCGGGTGCACACGTGTTCTAGAGTGAAGGGGGTGCGGGTGTGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCAACCTAGAGTGTACGTaGCATGCACGTCTGCAATGC +
Preference number: 4 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSNLECT*HARLQC
Trigger: GCATTGCAGACGTGCATGGCACGTACACTCTAGGTT...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGGAGAATGGGCCTTGGTaGAAACCTGCCTCTAAAGCC +
Preference number: 4 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGENGPW*KPASKA
Trigger: GGCTTTAGAGGCAGGTTTGCACCAAGGCCCATTCTC...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp GCCCTGAGACTCCCAGAGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTGAGACGTCAATGAGCTaGACACGGAAGGAGCTGGGA +
Preference number: 4 (lower is better)
Translates to: ALRLPEQLGESQSCSPGIETSMS*TRKELG
Trigger: TCCCAGCTCCTTCCGTGTGCAGCTCATTGACGTCTC...AATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTCTCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTGGTTGTGCTGGAAGCTaGGGTGGAAGGCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCGCAGS*GGRQCP
Trigger: TGGGCATTGCCTTCCACCCCAGCTTCCAGCACAACC...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CTGAGACTCCCAGAGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTACCGGTTGTGCTGGAAGCTaGGGTGGAAGGCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: LRLPEQLGESQSCSPGITGCAGS*GGRQCP
Trigger: TGGGCATTGCCTTCCACCCCAGCTTCCAGCACAACC...GGTAATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTCTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp ATTCATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGAGCCTGCGGTTGTGCTaGAAGCTGGGGTGGAAGGCA +
Preference number: 4 (lower is better)
Translates to: IHQVFLSLCSVPFPAPGRSLRLC*KLGWKA
Trigger: TGCCTTCCACCCCAGCTTCCAGCACAACCGCAGGCT...CCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACCAGGTGGTGCCCGCCTaGATGCGTCAATTATTTTGT +
Preference number: 4 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNQVVPA*MRQLFC
Trigger: ACAAAATAATTGACGCATCCAGGCGGGCACCACCTG...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTTCTGCCCAGCTAGTGTaGGTGGCTTCTGCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCSAQLV*VASAPR
Trigger: TCTTGGGGCAGAAGCCACCCACACTAGCTGGGCAGA...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACAGGAATCAGGTCTCCTaGGTTTACACTGAGCAGGGA +
Preference number: 4 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNRNQVS*VYTEQG
Trigger: TCCCTGCTCAGTGTAAACCCAGGAGACCTGATTCCT...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGCACAGTCCTGGACACTaGGCCACCCCTGCAGCATTG +
Preference number: 4 (lower is better)
Translates to: RQLAAASMDATSLELSFLHSPGH*ATPAAL
Trigger: CAATGCTGCAGGGGTGGCCCAGTGTCCAGGACTGTG...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACCACACCCGAGGTAGCTaGCATGTAATAACTGCTCAG +
Preference number: 4 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDHTRGS*HVITAQ
Trigger: CTGAGCAGTTATTACATGCCAGCTACCTCGGGTGTG...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp AGGAAGATGCCCACTCAACCTCCCCTGGGCCACTGGAGGCCCGAGAGGAGCATGTGGGAGAATGGGCCTTaGTGCAAACCTGCCTCTAAA +
Preference number: 4 (lower is better)
Translates to: RKMPTQPPLGHWRPERSMWENGP*CKPASK
Trigger: TTTAGAGGCAGGTTTGCACCAAGGCCCATTCTCCCA...CATGCTCCTCTCGGGCCTCCAGTGGCCCAGGGGAGGTTGAGTGGGCATCTTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTGCTGCGGATACCCACTaGGTAGTAGACGTAGAGCCT +
Preference number: 4 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCAADTH*VVDVEP
Trigger: AGGCTCTACGTCTACTACTCAGTGGGTATCCGCAGC...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp GTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGCCTCTGCAGTCAGACGCCCGCTCATaGAATCCCCAAAAATGTAGA +
Preference number: 4 (lower is better)
Translates to: VFLSLCSVPFPAPGRPLQSDARS*NPQKCR
Trigger: TCTACATTTTTGGGGATTTCATGAGCGGGCGTCTGA...CTGCAGAGGCCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR TCA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACTCCGTGTCTTCGGGATaGACTTTTCTTTGGGCACAA +
Preference number: 4 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNSVSSG*TFLWAQ
Trigger: TTGTGCCCAAAGAAAAGTTCATCCCGAAGACACGGA...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACTGGCATAGCCCTGGGTaGAAAAGTGTCAGTAGTTTC +
Preference number: 4 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDWHSPG*KSVSSF
Trigger: GAAACTACTGACACTTTTTCACCCAGGGCTATGCCA...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACGTAAAGCACAGAGTATaGGGAGTCCAAGACAGTGAC +
Preference number: 4 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNVKHRV*GVQDSD
Trigger: GTCACTGTCTTGGACTCCTCATACTCTGTGCTTTAC...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp GTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACAGCTCGGCTGCATTCTTaGGGGCCTCAAGGCTTGCTG +
Preference number: 4 (lower is better)
Translates to: VRKELLPPMMDHALPEPTARLHS*GPQGLL
Trigger: CAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGC...TGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACTTGTTCCATCTGCGATaGGCACCCTTTCTGCAGAAA +
Preference number: 4 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNLFHLR*APFLQK
Trigger: TTTCTGCAGAAAGGGTGCTCATCGCAGATGGAACAA...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp AGGAAGATGCCCACTCAACCTCCCCTGGGCCACTGGAGGCCCGAGAGGAGCATGCCCTCTCTGAGAATCTaGTCCTGGCTATTGACTAGA +
Preference number: 4 (lower is better)
Translates to: RKMPTQPPLGHWRPERSMPSLRI*SWLLTR
Trigger: TCTAGTCAATAGCCAGGATCAGATTCTCAGAGAGGG...CATGCTCCTCTCGGGCCTCCAGTGGCCCAGGGGAGGTTGAGTGGGCATCTTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp ACACACCCGCACCCCCTTCACTCTAGAACACGTGTGCACCCGCTGGGCGCACACGTTGTGACCTCTGACTaGTGTCTTGAACACAGTCCT +
Preference number: 4 (lower is better)
Translates to: THPHPLHSRTRVHPLGAHVVTSD*CLEHSP
Trigger: AGGACTGTGTTCAAGACATCAGTCAGAGGTCACAAC...GTGTGCGCCCAGCGGGTGCACACGTGTTCTAGAGTGAAGGGGGTGCGGGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGCTGAGTCAAAAACTCTaGGAGACAGGACCCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGLSQKL*ETGPSN
Trigger: GTTGCTGGGTCCTGTCTCTCAGAGTTTTTGACTCAG...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp GTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGCCTCTGCAGAGGGATTACCAAGTCTaGGTGATGAGAGCTGAGGAA +
Preference number: 4 (lower is better)
Translates to: VFLSLCSVPFPAPGRPLQRDYQV*VMRAEE
Trigger: TTCCTCAGCTCTCATCACTCAGACTTGGTAATCCCT...CTGCAGAGGCCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp TTTATTCATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCACACCAGCCCCACCTaGTCGGCCACGAAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: FIHQVFLSLCSVPFPAPGHTSPT*SATKKR
Trigger: CCGCTTCTTCGTGGCCGAGCAGGTGGGGCTGGTGTG...CCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATGAATAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTAGTAGACGTAGAGCCTaGGGTTGTGCTGGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCSRRRA*GCAGSW
Trigger: CCAGCTTCCAGCACAACCGCAGGCTCTACGTCTACT...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp AGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTACCAAGTCTGAGTGATCGATGCGCAGCACCTTaGCCAGCAGCGCCGACTTGT +
Preference number: 4 (lower is better)
Translates to: SSWERVSRVAQGLPSLSDRCAAP*PAAPTC
Trigger: ACAAGTCGGCGCTGCTGGGCAAGGTGCTGCGCATCG...ATCACTCAGACTTGGTAATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp ATTCATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGTCTGGCCGTGGCCCATaGAGATCTCACTGTACTGCC +
Preference number: 4 (lower is better)
Translates to: IHQVFLSLCSVPFPAPGRSGRGP*RSHCTA
Trigger: GGCAGTACAGTGAGATCTGCATGGGCCACGGCCAGA...CCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTAGAGTCACATGTGAATaGTCCCTCAGCGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCRVTCE*SLSGQL
Trigger: CAGCTGGCCGCTGAGGGAGCATTCACATGTGACTCT...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp ACACACCCGCACCCCCTTCACTCTAGAACACGTGTGCACCCGCTGGGCGCACACCGTGCCATGCACGTCTaGAATGCTACCTCATTTTTC +
Preference number: 4 (lower is better)
Translates to: THPHPLHSRTRVHPLGAHRAMHV*NATSFF
Trigger: GAAAAATGAGGTAGCATTGCAGACGTGCATGGCACG...GTGTGCGCCCAGCGGGTGCACACGTGTTCTAGAGTGAAGGGGGTGCGGGTGTGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACAGCGCCGACTTGTTTTaGGCATTTCCAAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDSADLF*AFPNVP
Trigger: TGGGACATTTGGAAATGCCCAAAACAAGTCGGCGCT...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGTCCTCGAACTTGTTCTaGCCCACGTCGCCGCAGAAG +
Preference number: 4 (lower is better)
Translates to: RQLAAASMDATSLELSFLSSNLF*PTSPQK
Trigger: CTTCTGCGGCGACGTGGGCCAGAACAAGTTCGAGGA...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTGTTGTTGATGAGGCCTaGGAACTCACAGGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCVVDEA*ELTGLA
Trigger: GGCCAGACCTGTGAGTTCCCAGGCCTCATCAACAAC...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCAGCTCCCAGAACTTaGCACAGCATCACCCCCTCC +
Preference number: 4 (lower is better)
Translates to: VRKELLPPMMDHALPEPTPAPRT*HSITPS
Trigger: GGAGGGGGTGATGCTGTGCCAAGTTCTGGGAGCTGG...TGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACAACAGCAGGAGGTGAGTaGCAGTGGGGCAGGGTAGTG +
Preference number: 4 (lower is better)
Translates to: VRKELLPPMMDHALPEPTTAGGE*QWGRVV
Trigger: CACTACCCTGCCCCACTGCCACTCACCTCCTGCTGT...TGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACCTATTGACTAGAGGTTaGATTAGAGGGGGTGAGGGT +
Preference number: 4 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDLLTRG*IRGGEG
Trigger: ACCCTCACCCCCTCTAATCCAACCTCTAGTCAATAG...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp AGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTACCAAGTCTGAGTGATGCACACGGAAGGAGCTaGGACATAGCCGGGCATGGC +
Preference number: 4 (lower is better)
Translates to: SSWERVSRVAQGLPSLSDAHGRS*DIAGHG
Trigger: GCCATGCCCGGCTATGTCCCAGCTCCTTCCGTGTGC...ATCACTCAGACTTGGTAATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
3UTR CAA 72 bp GAGTATGCTGCTGAGTGGCTTCTCCAGCATACGGCCTaGGAGGTCATCCAGTCCTCACAGCCATCCTCCCTG +
Preference number: 4 (lower is better)
Translates to: EYAAEWLLQHTA*EVIQSSQPSSL
Trigger: CAGGGAGGATGGCTGTGAGGACTGGATGACCTCCAAGGCCGTATGCTGGAGAAGCCACTCAGCAGCATACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGTCCCGCCATCTCCAGTaGAGATGTAGAGGTACCCGT +
Preference number: 4 (lower is better)
Translates to: RQLAAASMDATSLELSFLSRHLQ*RCRGTR
Trigger: ACGGGTACCTCTACATCTTCACTGGAGATGGCGGGA...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGTCAGACGCCCGCTCATaGAATCCCCAAAAATGTAGA +
Preference number: 4 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGSDARS*NPQKCR
Trigger: TCTACATTTTTGGGGATTTCATGAGCGGGCGTCTGA...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGCGCGACAAGAAGACTTaGGTTCTACATGTTAGGCTG +
Preference number: 4 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGRDKKT*VLHVRL
Trigger: CAGCCTAACATGTAGAACTCAAGTCTTCTTGTCGCG...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCCACACCAGCCCCACCTaGTCGGCCACGAAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSHTSPT*SATKKR
Trigger: CCGCTTCTTCGTGGCCGAGCAGGTGGGGCTGGTGTG...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCCCCGCATCCTCGTCGTaGTCGCAGTTGTGGGTGCCC +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSPASSS*SQLWVP
Trigger: GGGCACCCACAACTGCGAGCACGACGAGGATGCGGG...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp GTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCCAACACACACTCCTaGCTTGGGTCTGCAGAGGAC +
Preference number: 4 (lower is better)
Translates to: VRKELLPPMMDHALPEPTPNTHS*LGSAED
Trigger: GTCCTCTGCAGACCCAAGGCAGGAGTGTGTGTTGGG...TGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGACATCCTGTCTTCACTaGCTGGTGACTCATCTGCTT +
Preference number: 4 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGTSCLH*LVTHLL
Trigger: AAGCAGATGAGTCACCAGGCAGTGAAGACAGGATGT...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGCTGAGCTCTGCCTCCTaGCAGATCAGCAGTGGCATT +
Preference number: 4 (lower is better)
Translates to: RQLAAASMDATSLELSFLLSSAS*QISSGI
Trigger: AATGCCACTGCTGATCTGGCAGGAGGCAGAGCTCAG...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACGTAGCAGGGACAAACTaGATAAGGGCTAACAATTGC +
Preference number: 4 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDVAGTN*IRANNC
Trigger: GCAATTGTTAGCCCTTATGCAGTTTGTCCCTGCTAC...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCAGAGTGTACGTGCCATaGACGTCTGCAATGCTACCT +
Preference number: 4 (lower is better)
Translates to: WRCCIPGKEKDPALGEWARVYVP*TSAMLP
Trigger: AGGTAGCATTGCAGACGTGCATGGCACGTACACTCT...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp GTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACATGCTGCCAGCATGGATaGCACCAGCCTCGAACTGAG +
Preference number: 4 (lower is better)
Translates to: VRKELLPPMMDHALPEPTCCQHG*HQPRTE
Trigger: CTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCA...TGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACAGCATCGGCTACCACGTaGCCCAGGTTTGAGTTGAGG +
Preference number: 4 (lower is better)
Translates to: VRKELLPPMMDHALPEPTASATT*PRFELR
Trigger: CCTCAACTCAAACCTGGGCCACGTGGTAGCCGATGC...TGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCGCTGCAGGCAGCCCTTaGCATCGGCTACCACGTGGC +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSAAGSP*HRLPRG
Trigger: GCCACGTGGTAGCCGATGCCAAGGGCTGCCTGCAGC...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GGACAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTGAGAGCGCCGACTTGTTTTaGGCATTTCCAAATGTCCCA +
Preference number: 4 (lower is better)
Translates to: GQRPGGQRGLGKVLEEGESADLF*AFPNVP
Trigger: TGGGACATTTGGAAATGCCCAAAACAAGTCGGCGCT...CTCACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp TCATTTATTCATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTCTCCGCGTGGAGCTGTaGCACTCGGCTCCCCTGTCG +
Preference number: 4 (lower is better)
Translates to: SFIHQVFLSLCSVPFPAPLRVEL*HSAPLS
Trigger: CGACAGGGGAGCCGAGTGCCACAGCTCCACGCGGAG...AGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATGAATAAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp GTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACAGAAGAGCGCCTGGCCTaGAAGACTGAAGGCCAAAGC +
Preference number: 4 (lower is better)
Translates to: VRKELLPPMMDHALPEPTEERLA*KTEGQS
Trigger: GCTTTGGCCTTCAGTCTTCCAGGCCAGGCGCTCTTC...TGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCGGTGGCCTGGCAGGGTaGAGGTGCTGTATCCCAGGG +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSGGLAG*RCCIPG
Trigger: CCCTGGGATACAGCACCTCCACCCTGCCAGGCCACC...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp ATTCATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGGACTCCCAGAGCAGCTaGGAGAGAGTCAGTCGTGTA +
Preference number: 4 (lower is better)
Translates to: IHQVFLSLCSVPFPAPGRDSQSS*ERVSRV
Trigger: TACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTC...CCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR TCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCGCTCCCCTGTCGACATaGAGTACAGCTCCCCGGCCT +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSAPLST*STAPRP
Trigger: AGGCCGGGGAGCTGTACTTCATGTCGACAGGGGAGC...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp GTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACAGTCTTCACTGCCTGGTaGCTCATCTGCTTACCCACC +
Preference number: 4 (lower is better)
Translates to: VRKELLPPMMDHALPEPTVFTAW*LICLPT
Trigger: GGTGGGTAAGCAGATGAGTCACCAGGCAGTGAAGAC...TGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp TTTATTCATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGTGTTGGCGCACAGGCTaGGGTCGTAGCACTCGAACC +
Preference number: 4 (lower is better)
Translates to: FIHQVFLSLCSVPFPAPGCWRTG*GRSTRT
Trigger: GGTTCGAGTGCTACGACCGCAGCCTGTGCGCCAACA...CCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATGAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCTATCTAACCTCTGTGTaGCTCAGTTTCCCATTCTGT +
Preference number: 4 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSYLTSV*LSFPFC
Trigger: ACAGAATGGGAAACTGAGGCACACAGAGGTTAGATA...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCGGGCCCTGGCTCGGCTaGATTCTTGAGGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSGPWLG*ILEGLK
Trigger: CTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCC...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp TTTATTCATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGGTAGACAACTCCGCGTaGAGCTGTGGCACTCGGCTC +
Preference number: 4 (lower is better)
Translates to: FIHQVFLSLCSVPFPAPGVDNSA*SCGTRL
Trigger: GAGCCGAGTGCCACAGCTCCACGCGGAGTTGTCTAC...CCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATGAATAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR TCA 90 bp AGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTACCAAGTCTGAGTGATTCCCGCCATCTCCAGTaGAGATGTAGAGGTACCCGT +
Preference number: 4 (lower is better)
Translates to: SSWERVSRVAQGLPSLSDSRHLQ*RCRGTR
Trigger: ACGGGTACCTCTACATCTTCACTGGAGATGGCGGGA...ATCACTCAGACTTGGTAATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR TCA 90 bp CTGAGACTCCCAGAGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTACCTGTAAAATGAACGGCTaGGACGTCAATGAGCTGCAC +
Preference number: 4 (lower is better)
Translates to: LRLPEQLGESQSCSPGITCKMNG*DVNELH
Trigger: GTGCAGCTCATTGACGTCTCAGCCGTTCATTTTACA...GGTAATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTTGGTGCCCGCCTGGATaGGTCAATTATTTTGTAGAC +
Preference number: 4 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCWCPPG*VNYFVD
Trigger: GTCTACAAAATAATTGACGCATCCAGGCGGGCACCA...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCCCCTTCCCCACTGGATaGCTTCCGGTTCTCTCCAGC +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSPFPTG*LPVLSS
Trigger: GCTGGAGAGAACCGGAAGGCATCCAGTGGGGAAGGG...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCAAACTTTCAGAGCAGTaGTTGGCATGTAGTAAGCGC +
Preference number: 4 (lower is better)
Translates to: WRCCIPGKEKDPALGEWAKLSEQ*LACSKR
Trigger: GCGCTTACTACATGCCAAGCACTGCTCTGAAAGTTT...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCGTCCTTCACGTGGCATaGCCCTCCTCACTCTGTCGC +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSVLHVA*PSSLCR
Trigger: GCGACAGAGTGAGGAGGGGCATGCCACGTGAAGGAC...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCAGGAGCTCTTTCTTCTaGTATTGTGAGAGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSRSSFF*YCESFF
Trigger: GAAGAAACTCTCACAATAGCAGAAGAAAGAGCTCCT...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp AGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTACCAAGTCTGAGTGATGTGTTCCTGAGTCTCTaGTCCGTGCCATTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: SSWERVSRVAQGLPSLSDVFLSL*SVPFPA
Trigger: TGCTGGGAATGGCACGGAGCAGAGACTCAGGAACAC...ATCACTCAGACTTGGTAATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp GTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACAGCCAGCTGTAGGTGGTaGAGTGAAAGAAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: VRKELLPPMMDHALPEPTASCRW*SERSTG
Trigger: TCCAGTGCTTCTTTCACTCCACCACCTACAGCTGGC...TGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCCCGGCTCTGGGAGAATaGGCCTTGGTGCAAACCTGC +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSPALGE*ALVQTC
Trigger: GCAGGTTTGCACCAAGGCCCATTCTCCCAGAGCCGG...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACAAAAATTGTCTTACATaGAACCAGTCCATGATGCCA +
Preference number: 4 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDKNCLT*NQSMMP
Trigger: TGGCATCATGGACTGGTTTCATGTAAGACAATTTTT...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp TCATTTATTCATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTCGGCTGAGACGTCAATaGGCTGCACACGGAAGGAGC +
Preference number: 4 (lower is better)
Translates to: SFIHQVFLSLCSVPFPAPRLRRQ*AAHGRS
Trigger: GCTCCTTCCGTGTGCAGCTCATTGACGTCTCAGCCG...AGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATGAATAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCACTCTAGAACACGTGTaGACCCGCTGGGCGCACACA +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSTLEHV*TRWAHT
Trigger: TGTGTGCGCCCAGCGGGTGCACACGTGTTCTAGAGT...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCGCCTGCCCCAAGGCCTaGCCAGCCACCCCTGGTGCC +
Preference number: 4 (lower is better)
Translates to: TSFKPPCFMLITLCQALFACPKA*PATPGA
Trigger: GGCACCAGGGGTGGCTGGGCAGGCCTTGGGGCAGGC...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCCAGCACACCGCTCTCTaGAGGCATAGTGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSQHTAL*RHSVAG
Trigger: CCCAGCTACACTATGCCTGCAGAGAGCGGTGTGCTG...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCCTGGCATGTAATAACTaGTCAGTAAAAGCTAGTTCT +
Preference number: 4 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSLACNN*SVKASS
Trigger: AGAACTAGCTTTTACTGAGCAGTTATTACATGCCAG...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp TCATTTATTCATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGTCCCTGGGTTCTCTTaGAGGGACATCAGACGCCCG +
Preference number: 4 (lower is better)
Translates to: SFIHQVFLSLCSVPFPAPVPGFS*RDIRRP
Trigger: CGGGCGTCTGATGTCCCTCCAAGAGAACCCAGGGAC...AGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATGAATAAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CCA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCCAGAGCTGGACTACCTaGGCTCAAATTCAAATTTTG +
Preference number: 4 (lower is better)
Translates to: WRCCIPGKEKDPALGEWAQSWTT*AQIQIL
Trigger: CAAAATTTGAATTTGAGCCCAGGTAGTCCAGCTCTG...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GGACAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTGAGTTCTGGCCTTACAGCTaGATGCGTCAATTATTTTGT +
Preference number: 4 (lower is better)
Translates to: GQRPGGQRGLGKVLEEGEFWPYS*MRQLFC
Trigger: ACAAAATAATTGACGCATCCAGCTGTAAGGCCAGAA...CTCACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp TCATTTATTCATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTCAGATCTCACTGTACTaGCACTGGCCTGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: SFIHQVFLSLCSVPFPAPQISLY*HWPVPG
Trigger: CCCAGGGACAGGCCAGTGGCAGTACAGTGAGATCTG...AGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATGAATAAATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTCATGCACGTCTGCAATaGTACCTCATTTTTCATCCA +
Preference number: 4 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCHARLQ*YLIFHP
Trigger: TGGATGAAAAATGAGGTAGCATTGCAGACGTGCATG...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GAGGATTACATGAGTGAATGGTATGTTAAACTTTCAGAGCAGTGCTTGGCATGTCTCCGCGTGGAGCTGTaGCACTCGGCTCCCCTGTCG +
Preference number: 4 (lower is better)
Translates to: EDYMSEWYVKLSEQCLACLRVEL*HSAPLS
Trigger: CGACAGGGGAGCCGAGTGCCACAGCTCCACGCGGAG...ACATGCCAAGCACTGCTCTGAAAGTTTAACATACCATTCACTCATGTAATCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCCTTTCCCTTCCCCACTaGATGCCTTCCGGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSLSLPH*MPSGSL
Trigger: GAGAGAACCGGAAGGCATCCAGTGGGGAAGGGAAAG...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACAACACCATACGAGGAGTaGTTTCCCAGCAGGAATTGT +
Preference number: 4 (lower is better)
Translates to: VRKELLPPMMDHALPEPTTPYEE*FPSRNC
Trigger: ACAATTCCTGCTGGGAAACCACTCCTCGTATGGTGT...TGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp GTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACAACCTCTATTTTGCAATaGGACTCAGAGAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: VRKELLPPMMDHALPEPTTSILQ*DSERHR
Trigger: TCTGTGCCTCTCTGAGTCTCATTGCAAAATAGAGGT...TGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp AGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTACCAAGTCTGAGTGATTCCACCACTGTAAAATaGACGGCTGAGACGTCAATG +
Preference number: 4 (lower is better)
Translates to: SSWERVSRVAQGLPSLSDSTTVK*TAETSM
Trigger: CATTGACGTCTCAGCCGTTCATTTTACAGTGGTGGA...ATCACTCAGACTTGGTAATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCCCGAAGTCCGAGTACTaGGCGCAGAGGCGCAGCGGC +
Preference number: 4 (lower is better)
Translates to: TSFKPPCFMLITLCQALFPKSEY*AQRRSG
Trigger: GCCGCTGCGCCTCTGCGCGCAGTACTCGGACTTCGG...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp GAGGATTACATGAGTGAATGGTATGTTAAACTTTCAGAGCAGTGCTTGGCATGTTCCTCCCTGAGCAGGTaGTGGCTCCTCCACGCAGCC +
Preference number: 4 (lower is better)
Translates to: EDYMSEWYVKLSEQCLACSSLSR*WLLHAA
Trigger: GGCTGCGTGGAGGAGCCAGCACCTGCTCAGGGAGGA...ACATGCCAAGCACTGCTCTGAAAGTTTAACATACCATTCACTCATGTAATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GAGGATTACATGAGTGAATGGTATGTTAAACTTTCAGAGCAGTGCTTGGCATGTTCCGTCCTCGAAGCCTaGCTGCCCTCCCTCCTCAGG +
Preference number: 4 (lower is better)
Translates to: EDYMSEWYVKLSEQCLACSVLEA*LPSLLR
Trigger: CCTGAGGAGGGAGGGCAGCCAGGCTTCGAGGACGGA...ACATGCCAAGCACTGCTCTGAAAGTTTAACATACCATTCACTCATGTAATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GAGGATTACATGAGTGAATGGTATGTTAAACTTTCAGAGCAGTGCTTGGCATGTGCTTCCCAGCCAGGCTaGCACTCCCACACCAGGCAG +
Preference number: 4 (lower is better)
Translates to: EDYMSEWYVKLSEQCLACASQPG*HSHTRQ
Trigger: CTGCCTGGTGTGGGAGTGCCAGCCTGGCTGGGAAGC...ACATGCCAAGCACTGCTCTGAAAGTTTAACATACCATTCACTCATGTAATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACAATCTGTCCCCTCATCTaGAAAACAGGGACAGTGATA +
Preference number: 4 (lower is better)
Translates to: VRKELLPPMMDHALPEPTICPLI*KTGTVI
Trigger: TATCACTGTCCCTGTTTTCCAGATGAGGGGACAGAT...TGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGACATTATGTTTCTATTaGATAGCACCAGTATGGACA +
Preference number: 4 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGTLCFY*IAPVWT
Trigger: TGTCCATACTGGTGCTATCCAATAGAAACATAATGT...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp TCATTTATTCATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTCACGTGGCCCAGGTTTaGGTTGAGGTTCTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: SFIHQVFLSLCSVPFPAPHVAQV*VEVLVD
Trigger: GTCAACAAGAACCTCAACTCAAACCTGGGCCACGTG...AGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATGAATAAATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp GTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACAATAAGGGCTAACAATTaGTTCCCTCCTTTGTTCAGG +
Preference number: 4 (lower is better)
Translates to: VRKELLPPMMDHALPEPTIRANN*FPPLFR
Trigger: CCTGAACAAAGGAGGGAAGCAATTGTTAGCCCTTAT...TGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCCTCCCTTCCCTGGCTTaGTGCCCTAAGATATCTAAC +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSLPSLA*CPKISN
Trigger: GTTAGATATCTTAGGGCACCAAGCCAGGGAAGGGAG...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCCATCCTCAGAGGCCCTaGAGGACTTTAAGGCAAGAT +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSHPQRP*RTLRQD
Trigger: ATCTTGCCTTAAAGTCCTCCAGGGCCTCTGAGGATG...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCTGCTGTATTCAAACTTaGCTTCTCCCTTCCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSCCIQT*LLPSLA
Trigger: AGCCAGGGAAGGGAGAAGTCAAGTTTGAATACAGCA...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp TCATTTATTCATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTTTCATCAAGTGTTCCTaGGTCTCTGCTCCGTGCCAT +
Preference number: 4 (lower is better)
Translates to: SFIHQVFLSLCSVPFPAPFIKCS*VSAPCH
Trigger: ATGGCACGGAGCAGAGACTCAGGAACACTTGATGAA...AGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATGAATAAATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR GCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCCCTAAAGCTTTCTGCTaGAGCCCAGGATCCTATACT +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSPKAFC*SPGSYT
Trigger: AGTATAGGATCCTGGGCTGCAGCAGAAAGCTTTAGG...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCGCCACGAAGAAGCGGTaGGTGCCATCCCTGGCATGG +
Preference number: 4 (lower is better)
Translates to: TSFKPPCFMLITLCQALFATKKR*VPSLAW
Trigger: CCATGCCAGGGATGGCACCCACCGCTTCTTCGTGGC...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCTTCTACATGTTAGGCTaGAGGAGCTCTTTCTTCTGC +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSFYMLG*RSSFFC
Trigger: GCAGAAGAAAGAGCTCCTTCAGCCTAACATGTAGAA...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp GAGGATTACATGAGTGAATGGTATGTTAAACTTTCAGAGCAGTGCTTGGCATGTTGCATCCCAGGAAGATaGCCACTCAACCTCCCCTGG +
Preference number: 4 (lower is better)
Translates to: EDYMSEWYVKLSEQCLACCIPGR*PLNLPW
Trigger: CCAGGGGAGGTTGAGTGGGCATCTTCCTGGGATGCA...ACATGCCAAGCACTGCTCTGAAAGTTTAACATACCATTCACTCATGTAATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GAGGATTACATGAGTGAATGGTATGTTAAACTTTCAGAGCAGTGCTTGGCATGTTGGAAAGGACAGAGGTaGCCCCAGGGCCCAAACACA +
Preference number: 4 (lower is better)
Translates to: EDYMSEWYVKLSEQCLACWKGQR*PQGPNT
Trigger: TGTGTTTGGGCCCTGGGGCCACCTCTGTCCTTTCCA...ACATGCCAAGCACTGCTCTGAAAGTTTAACATACCATTCACTCATGTAATCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCCCTGATGATCTGAGGTaGGACATTTCATCCCAAAAC +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSPDDLR*DISSQN
Trigger: GTTTTGGGATGAAATGTCCCACCTCAGATCATCAGG...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCCTGCCTTTACATGGGTaGCCTGGCAGGGTGGAGGTG +
Preference number: 4 (lower is better)
Translates to: TSFKPPCFMLITLCQALFLPLHG*PGRVEV
Trigger: CACCTCCACCCTGCCAGGCCACCCATGTAAAGGCAG...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCCAGATCTCACTGTACTaGCACTGGCCTGTCCCTGGG +
Preference number: 4 (lower is better)
Translates to: TSFKPPCFMLITLCQALFQISLY*HWPVPG
Trigger: CCCAGGGACAGGCCAGTGGCAGTACAGTGAGATCTG...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp GAGGATTACATGAGTGAATGGTATGTTAAACTTTCAGAGCAGTGCTTGGCATGTTATCTGTGCTGGACGTaGTCACAGGCATGTCCCAGC +
Preference number: 4 (lower is better)
Translates to: EDYMSEWYVKLSEQCLACYLCWT*SQACPS
Trigger: GCTGGGACATGCCTGTGAGCACGTCCAGCACAGATA...ACATGCCAAGCACTGCTCTGAAAGTTTAACATACCATTCACTCATGTAATCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp GAGGATTACATGAGTGAATGGTATGTTAAACTTTCAGAGCAGTGCTTGGCATGTTCCAGCATACGGCCTTaGAGGTCATCCAGTCCTCAC +
Preference number: 4 (lower is better)
Translates to: EDYMSEWYVKLSEQCLACSSIRP*RSSSPH
Trigger: GTGAGGACTGGATGACCTCCAAGGCCGTATGCTGGA...ACATGCCAAGCACTGCTCTGAAAGTTTAACATACCATTCACTCATGTAATCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCATCCTCTCAGAGCTGTaGTCCACGGCGTTCTCGTCA +
Preference number: 4 (lower is better)
Translates to: TSFKPPCFMLITLCQALFILSEL*STAFSS
Trigger: TGACGAGAACGCCGTGGACCACAGCTCTGAGAGGAT...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCGAGTATGCTGCTGAGTaGCTTCTCCAGCATACGGCC +
Preference number: 4 (lower is better)
Translates to: TSFKPPCFMLITLCQALFEYAAE*LLQHTA
Trigger: GGCCGTATGCTGGAGAAGCCACTCAGCAGCATACTC...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCTTCCAACCCCCGACATaGGCCACATCCTGTCTTCAC +
Preference number: 4 (lower is better)
Translates to: TSFKPPCFMLITLCQALFFQPPT*ATSCLH
Trigger: GTGAAGACAGGATGTGGCCCATGTCGGGGGTTGGAA...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCGCGGCCAGCTGTAGGTaGTGGAGTGAAAGAAGCACT +
Preference number: 4 (lower is better)
Translates to: TSFKPPCFMLITLCQALFAASCR*WSERST
Trigger: AGTGCTTCTTTCACTCCACCACCTACAGCTGGCCGC...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
3UTR CAA 72 bp ATGAGTGAATGGTATGTTAAACTTTCAGAGCAGTGCTaGGCATGTAGTAAGCGCTCAGCAGAGGTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: MSEWYVKLSEQC*ACSKRSAEVSC
Trigger: ACAGCTGACCTCTGCTGAGCGCTTACTACATGCCAAGCACTGCTCTGAAAGTTTAACATACCATTCACTCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCCACGTGGCCCAGGTTTaGGTTGAGGTTCTTGTTGAC +
Preference number: 4 (lower is better)
Translates to: TSFKPPCFMLITLCQALFHVAQV*VEVLVD
Trigger: GTCAACAAGAACCTCAACTCAAACCTGGGCCACGTG...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCACCCACTGGTGTAGATaGCACCATACGAGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: TSFKPPCFMLITLCQALFTHWCR*HHTRSG
Trigger: ACCACTCCTCGTATGGTGTCATCTACACCAGTGGGT...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR GCA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCTCCTTCAAACCTCCTTaGTTTATGCTAATAACTCTT +
Preference number: 4 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSSFKPP*FMLITL
Trigger: AAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGA...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CCA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCCCCAGCAGGAATTGTTaGGGAGATGCAGGCATAAGA +
Preference number: 4 (lower is better)
Translates to: TSFKPPCFMLITLCQALFPSRNC*GDAGIR
Trigger: TCTTATGCCTGCATCTCCCCAACAATTCCTGCTGGG...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCTCTGATCCTGGCTATTaGCTAGAGGTTGGATTAGAG +
Preference number: 4 (lower is better)
Translates to: TSFKPPCFMLITLCQALFSDPGY*LEVGLE
Trigger: CTCTAATCCAACCTCTAGTCAATAGCCAGGATCAGA...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR TCA 90 bp GAGGATTACATGAGTGAATGGTATGTTAAACTTTCAGAGCAGTGCTTGGCATGTATTCTCAACCAAGACTaGGTCAAAAACTCTGAGAGA +
Preference number: 4 (lower is better)
Translates to: EDYMSEWYVKLSEQCLACILNQD*VKNSER
Trigger: TCTCTCAGAGTTTTTGACTCAGTCTTGGTTGAGAAT...ACATGCCAAGCACTGCTCTGAAAGTTTAACATACCATTCACTCATGTAATCCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS TCA 90 bp ACTGCGCGCAGAGGCGCAGCGGCTGCGTCGGCCGGAAGGGCGGCCTaGAGTCCAGGCACTGCGGATGCGCGGCGGCCCCGAGCACCCAAA +
Preference number: 5 (lower is better)
Translates to: TARRGAAAASAGRAA*SPGTADARRPRAPK
Trigger: TTTGGGTGCTCGGGGCCGCCGCGCATCCGCAGTGCCTGGACTTCAGGCCGCCCTTCCGGCCGACGCAGCCGCTGCGCCTCTGCGCGCAGT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS GCA 90 bp AGCTCGGCGTCGCGCCCCTCATCGCAGCAGCCGAAGTCCGAGTACTaGGCGCAGAGGCGCAGCGGCTGCGTCGGCCGGAAGGGCGGCCTG +
Preference number: 5 (lower is better)
Translates to: SSASRPSSQQPKSEY*AQRRSGCVGRKGGL
Trigger: CAGGCCGCCCTTCCGGCCGACGCAGCCGCTGCGCCTCTGCGCGCAGTACTCGGACTTCGGCTGCTGCGATGAGGGGCGCGACGCCGAGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS GCA 90 bp CGGGCTGCGCCGCGGGGTCGCCCACGAACGGGTTGTCGGGCGGGATaGCGTAGGGCAGGCCGCGCTCCTTACGGTCCACGTCGATGCGCA +
Preference number: 5 (lower is better)
Translates to: RAAPRGRPRTGCRAG*RRAGRAPYGPRRCA
Trigger: TGCGCATCGACGTGGACCGTAAGGAGCGCGGCCTGCCCTACGGCATCCCGCCCGACAACCCGTTCGTGGGCGACCCCGCGGCGCAGCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS GCA 90 bp TGCCCGAGGAGGGGTCGCCACGGTCGAAGGAGCAGCGCCACATGTTaGGCACGCCCAGGGCGTAGACCTCGGGCTGCGCCGCGGGGTCGC +
Preference number: 5 (lower is better)
Translates to: CPRRGRHGRRSSATC*ARPGRRPRAAPRGR
Trigger: GCGACCCCGCGGCGCAGCCCGAGGTCTACGCCCTGGGCGTGCGCAACATGTGGCGCTGCTCCTTCGACCGTGGCGACCCCTCCTCGGGCA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS GCA 90 bp TCGCAGCAGCCGAAGTCCGAGTACTGCGCGCAGAGGCGCAGCGGCTaGGTCGGCCGGAAGGGCGGCCTGAAGTCCAGGCACTGCGGATGC +
Preference number: 5 (lower is better)
Translates to: SQQPKSEYCAQRRSG*VGRKGGLKSRHCGC
Trigger: GCATCCGCAGTGCCTGGACTTCAGGCCGCCCTTCCGGCCGACGCAGCCGCTGCGCCTCTGCGCGCAGTACTCGGACTTCGGCTGCTGCGA
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS GCA 90 bp CCCGCATCCTCGTCGTGCTCGCAGTTGTGGGTGCCCACGCCGTTGTaGTGGCACTCCAGCAGGTTCCGCTCCCAGCCCGCGCAGCGCACA +
Preference number: 5 (lower is better)
Translates to: PASSSCSQLWVPTPL*WHSSRFRSQPAQRT
Trigger: TGTGCGCTGCGCGGGCTGGGAGCGGAACCTGCTGGAGTGCCAGCACAACGGCGTGGGCACCCACAACTGCGAGCACGACGAGGATGCGGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS TCA 90 bp CCAGCAGAATGGGCAGCGAGCCGCCCTGGCCGAACTCGGCTCTCTTaGCGGCGCGCACGGCGTAGGCAAACCCCAGCTGGCGACACACGA +
Preference number: 5 (lower is better)
Translates to: PAEWAASRPGRTRLS*RRARRRQTPAGDTR
Trigger: TCGTGTGTCGCCAGCTGGGGTTTGCCTACGCCGTGCGCGCCGTCAAGAGAGCCGAGTTCGGCCAGGGCGGCTCGCTGCCCATTCTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS CCA 90 bp GCATCCTCGTCGTGCTCGCAGTTGTGGGTGCCCACGCCGTTGTGCTaGCACTCCAGCAGGTTCCGCTCCCAGCCCGCGCAGCGCACATCG +
Preference number: 5 (lower is better)
Translates to: ASSSCSQLWVPTPLC*HSSRFRSQPAQRTS
Trigger: CGATGTGCGCTGCGCGGGCTGGGAGCGGAACCTGCTGGAGTGCCAGCACAACGGCGTGGGCACCCACAACTGCGAGCACGACGAGGATGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS CCA 90 bp CGGGATGGCCTGGGGCAGCGGCGTGTTGCCTACAGGTCGGGGTTCTaGTGGCTGCACACGACGCCCGCATCCTCGTCGTGCTCGCAGTTG +
Preference number: 5 (lower is better)
Translates to: RDGLGQRRVAYRSGF*WLHTTPASSSCSQL
Trigger: CAACTGCGAGCACGACGAGGATGCGGGCGTCGTGTGCAGCCACCAGAACCCCGACCTGTAGGCAACACGCCGCTGCCCCAGGCCATCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS GCA 90 bp TGCGGTCGTAGCACTCGAACCCTTCGCGCGCGCGCCAGCCATAGTTaGCGCCGCGCTCCACCACGTCCACCTCCTCGAACTTGTTCTGGC +
Preference number: 5 (lower is better)
Translates to: CGRSTRTLRARASHS*RRAPPRPPPRTCSG
Trigger: GCCAGAACAAGTTCGAGGAGGTGGACGTGGTGGAGCGCGGCGGCAACTATGGCTGGCGCGCGCGCGAAGGGTTCGAGTGCTACGACCGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS-3UTR CAA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCCAGAACCTGGCAAGGTaGCCCTCCAGCGCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSQNLAR*PSSAQS
Trigger: GCTCTGGGCGCTGGAGGGCAACCTTGCCAGGTTCTG...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACAGCTGCAGGCAGCCCTaGGCATCGGCTACCACGTGG +
Preference number: 5 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNSCRQP*ASATTW
Trigger: CCACGTGGTAGCCGATGCCAAGGGCTGCCTGCAGCT...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp CATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGCCTGGGTTGCGCAGCCCGTaGGCCACCTCCTCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: HQVFLSLCSVPFPAPGRPGLRSP*ATSSRH
Trigger: GTGCCTGGAGGAGGTGGCCAACGGGCTGCGCAACCC...AGGCCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CAA 90 bp CACCTTCCCTGGCTCCAGTCTCAGCGTGGCCTCATCTGGCAACAGGCCTGGGACTCGATGCGCAGCACCTaGCCCAGCAGCGCCGACTTG +
Preference number: 5 (lower is better)
Translates to: HLPWLQSQRGLIWQQAWDSMRST*PSSADL
Trigger: CAAGTCGGCGCTGCTGGGCAAGGTGCTGCGCATCGA...GTCCCAGGCCTGTTGCCAGATGAGGCCACGCTGAGACTGGAGCCAGGGAAGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp ACACACCCGCACCCCCTTCACTCTAGAACACGTGTGCACCCGCTGGGCGCACACTGGGGCAGCGGCGTGTaGCCTACAGGTCGGGGTTCT +
Preference number: 5 (lower is better)
Translates to: THPHPLHSRTRVHPLGAHWGSGV*PTGRGS
Trigger: AGAACCCCGACCTGTAGGCAACACGCCGCTGCCCCA...GTGTGCGCCCAGCGGGTGCACACGTGTTCTAGAGTGAAGGGGGTGCGGGTGTGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp GCCCTGAGACTCCCAGAGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTCAGAACCTGGCAAGGTaGCCCTCCAGCGCCCAGAGC +
Preference number: 5 (lower is better)
Translates to: ALRLPEQLGESQSCSPGIQNLAR*PSSAQS
Trigger: GCTCTGGGCGCTGGAGGGCAACCTTGCCAGGTTCTG...AATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTCTCAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CAA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGGGGTTGCGCAGCCCGTaGGCCACCTCCTCCAGGCAC +
Preference number: 5 (lower is better)
Translates to: RQLAAASMDATSLELSFLGLRSP*ATSSRH
Trigger: GTGCCTGGAGGAGGTGGCCAACGGGCTGCGCAACCC...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp AGGAAGATGCCCACTCAACCTCCCCTGGGCCACTGGAGGCCCGAGAGGAGCATGTGCCCTTCTCTGAACTaGTGTCCCAGTGGGGTGGGG +
Preference number: 5 (lower is better)
Translates to: RKMPTQPPLGHWRPERSMCPSLN*CPSGVG
Trigger: CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCA...CATGCTCCTCTCGGGCCTCCAGTGGCCCAGGGGAGGTTGAGTGGGCATCTTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS TCA 90 bp GAACCTGGCAAGGTTGCCCTCCAGCGCCCAGAGCTCCTGGTCAGTTaGCAGGTGACGGAACAGCCCCCGGCACTTATGCCACATGTCCAG +
Preference number: 5 (lower is better)
Translates to: EPGKVALQRPELLVS*QVTEQPPALMPHVQ
Trigger: CTGGACATGTGGCATAAGTGCCGGGGGCTGTTCCGTCACCTGTCAACTGACCAGGAGCTCTGGGCGCTGGAGGGCAACCTTGCCAGGTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS-3UTR CAA 90 bp AGGAAGATGCCCACTCAACCTCCCCTGGGCCACTGGAGGCCCGAGAGGAGCATGACACACACTCCTGCCTaGGGTCTGCAGAGGACACAC +
Preference number: 5 (lower is better)
Translates to: RKMPTQPPLGHWRPERSMTHTPA*GLQRTH
Trigger: GTGTGTCCTCTGCAGACCCAAGGCAGGAGTGTGTGT...CATGCTCCTCTCGGGCCTCCAGTGGCCCAGGGGAGGTTGAGTGGGCATCTTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCCACCCAGAGCTCCCTTaGCCAACCCTCCTAATCCAG +
Preference number: 5 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSHPELP*PTLLIQ
Trigger: CTGGATTAGGAGGGTTGGCAAAGGGAGCTCTGGGTG...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTGCCACCCCTGCAGCATaGACCCTGAGGCTCCAGCAC +
Preference number: 5 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCATPAA*TLRLQH
Trigger: GTGCTGGAGCCTCAGGGTCAATGCTGCAGGGGTGGC...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp CAGGGCCCTGGCTCGGCTGCATTCTTGAGGGCCTCAAGGCTTGCTGCACCTTCCCTCTGTCGCAGACAGTaGGCTGCTGCCAGCATGGAT +
Preference number: 5 (lower is better)
Translates to: QGPGSAAFLRASRLAAPSLCRRQ*AAASMD
Trigger: ATCCATGCTGGCAGCAGCCAACTGTCTGCGACAGAG...GGAAGGTGCAGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCCAGGGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS GCA 90 bp GGGAACTCACAGGTCTGGCCGTGGCCCATGCAGATCTCACTGTACTaGCACTGGCCTGTCCCTGGGTTCTCTTGGAGGGACATCAGACGC +
Preference number: 5 (lower is better)
Translates to: GNSQVWPWPMQISLY*HWPVPGFSWRDIRR
Trigger: GCGTCTGATGTCCCTCCAAGAGAACCCAGGGACAGGCCAGTGGCAGTACAGTGAGATCTGCATGGGCCACGGCCAGACCTGTGAGTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS CCA 90 bp TACCCACTGAGTAGTAGACGTAGAGCCTGCGGTTGTGCTGGAAGCTaGGGTGGAAGGCAATGCCCAGGAAGCCACGCTCGTCACCCTCCC +
Preference number: 5 (lower is better)
Translates to: YPLSSRRRACGCAGS*GGRQCPGSHARHPP
Trigger: GGGAGGGTGACGAGCGTGGCTTCCTGGGCATTGCCTTCCACCCCAGCTTCCAGCACAACCGCAGGCTCTACGTCTACTACTCAGTGGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS-3UTR CAA 90 bp CATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGCCTAGCAGCTGGCCCCCGTaGTGGTTTGAGGCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: HQVFLSLCSVPFPAPGRPSSWPP*WFEAGS
Trigger: AGAACCAGCCTCAAACCACAACGGGGGCCAGCTGCT...AGGCCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CAA 90 bp GCCCTGAGACTCCCAGAGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTTGTCCCTGGGTTCTCTaGGAGGGACATCAGACGCCC +
Preference number: 5 (lower is better)
Translates to: ALRLPEQLGESQSCSPGICPWVL*EGHQTP
Trigger: GGGCGTCTGATGTCCCTCCAAGAGAACCCAGGGACA...AATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTCTCAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CAA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTCCCCATAGGTTGGGTTaGGGTGCCCCACCCAGACCT +
Preference number: 5 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCPHRLG*GAPPRP
Trigger: AGGTCTGGGTGGGGCACCCAAACCCAACCTATGGGG...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp CATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGCCTGGAGGGCAACGTGGGTaGGGGAAGGTGCTTGAAGAG +
Preference number: 5 (lower is better)
Translates to: HQVFLSLCSVPFPAPGRPGGQRG*GKVLEE
Trigger: CTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCC...AGGCCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CAA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACTGGCCCAGGTTTGAGTaGAGGTTCTTGTTGACCAGC +
Preference number: 5 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNWPRFE*RFLLTS
Trigger: GCTGGTCAACAAGAACCTCAACTCAAACCTGGGCCA...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTAGCAGCTGGCCCCCGTaGTGGTTTGAGGCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCSSWPP*WFEAGS
Trigger: AGAACCAGCCTCAAACCACAACGGGGGCCAGCTGCT...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp TGGAGGTGCTGTATCCCAGGGAAGGAGAAGGATCCGGCTCTGGGAGAATGGGCCCTCCAGCATACGGCCTaGGAGGTCATCCAGTCCTCA +
Preference number: 5 (lower is better)
Translates to: WRCCIPGKEKDPALGEWALQHTA*EVIQSS
Trigger: TGAGGACTGGATGACCTCCAAGGCCGTATGCTGGAG...GGCCCATTCTCCCAGAGCCGGATCCTTCTCCTTCCCTGGGATACAGCACCTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp CTCCTGCCTTGGGTCTGCAGAGGACACACATGCACTGCAGCGCCTCACACATGTGGCTCGGCTGCATTCTaGAGGGCCTCAAGGCTTGCT +
Preference number: 5 (lower is better)
Translates to: LLPWVCRGHTCTAAPHTCGSAAF*RASRLA
Trigger: AGCAAGCCTTGAGGCCCTCAAGAATGCAGCCGAGCC...ACATGTGTGAGGCGCTGCAGTGCATGTGTGTCCTCTGCAGACCCAAGGCAGGAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp AGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTACCAAGTCTGAGTGATAGCTGCAGGCAGCCCTaGGCATCGGCTACCACGTGG +
Preference number: 5 (lower is better)
Translates to: SSWERVSRVAQGLPSLSDSCRQP*ASATTW
Trigger: CCACGTGGTAGCCGATGCCAAGGGCTGCCTGCAGCT...ATCACTCAGACTTGGTAATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CAA 90 bp GCTGGACAGAGGCCTGGAGGGCAACGTGGGTTGGGGAAGGTGCTTGAAGAGGGTCCCAGCAGCGCCGACTaGTTTTGGGCATTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: AGQRPGGQRGLGKVLEEGPSSAD*FWAFPN
Trigger: ATTTGGAAATGCCCAAAACAAGTCGGCGCTGCTGGG...ACCCTCTTCAAGCACCTTCCCCAACCCACGTTGCCCTCCAGGCCTCTGTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CAA 90 bp AGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTACCAAGTCTGAGTGATTCGATGCGCAGCACCTaGCCCAGCAGCGCCGACTTG +
Preference number: 5 (lower is better)
Translates to: SSWERVSRVAQGLPSLSDSMRST*PSSADL
Trigger: CAAGTCGGCGCTGCTGGGCAAGGTGCTGCGCATCGA...ATCACTCAGACTTGGTAATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CAA 90 bp GCCCTGAGACTCCCAGAGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTATCGGCAGCAAGTCATaGAGAGAGGTGTTGGCGCAC +
Preference number: 5 (lower is better)
Translates to: ALRLPEQLGESQSCSPGIIGSKS*REVLAH
Trigger: GTGCGCCAACACCTCTCTCAATGACTTGCTGCCGAT...AATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTCTCAGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS TCA 90 bp TCTGAACTCGCTGATGCGGATCCACTCACTGCTGCGGATACCCACTaGGTAGTAGACGTAGAGCCTGCGGTTGTGCTGGAAGCTGGGGTG +
Preference number: 5 (lower is better)
Translates to: SELADADPLTAADTH*VVDVEPAVVLEAGV
Trigger: CACCCCAGCTTCCAGCACAACCGCAGGCTCTACGTCTACTACTCAGTGGGTATCCGCAGCAGTGAGTGGATCCGCATCAGCGAGTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS-3UTR CAA 90 bp ATTCATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGAGAGCTCCTGGTCAGTaGACAGGTGACGGAACAGCC +
Preference number: 5 (lower is better)
Translates to: IHQVFLSLCSVPFPAPGRRAPGQ*TGDGTA
Trigger: GGCTGTTCCGTCACCTGTCAACTGACCAGGAGCTCT...CCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CAA 90 bp GCCCTGAGACTCCCAGAGCAGCTGGGAGAGAGTCAGTCGTGTAGCCCAGGGATTCAGCGCCGACTTGTTTaGGGCATTTCCAAATGTCCC +
Preference number: 5 (lower is better)
Translates to: ALRLPEQLGESQSCSPGIQRRLV*GISKCP
Trigger: GGGACATTTGGAAATGCCCAAAACAAGTCGGCGCTG...AATCCCTGGGCTACACGACTGACTCTCTCCCAGCTGCTCTGGGAGTCTCAGGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CAA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGCTGCTGTATTCAAACTaGACTTCTCCCTTCCCTGGC +
Preference number: 5 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGLLYSN*TSPFPG
Trigger: GCCAGGGAAGGGAGAAGTCAAGTTTGAATACAGCAG...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp ACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACCGCCCCCAACAATTGCTTCCCTCCTTaGTTCAGGTGTCCTCTCACT +
Preference number: 5 (lower is better)
Translates to: TPPAHDGPCTSRAHTAPNNCFPP*FRCPLT
Trigger: AGTGAGAGGACACCTGAACAAAGGAGGGAAGCAATT...GTTGGGGGCGGTGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp CTCCAAACCCTGGGCCACGGACCAGTACTGATGGGTGGCCTGTTAGGAACCGGGCCTCTGACTGATGTCTaGAACACAGTCCTGGACACT +
Preference number: 5 (lower is better)
Translates to: LQTLGHGPVLMGGLLGTGPLTDV*NTVLDT
Trigger: AGTGTCCAGGACTGTGTTCAAGACATCAGTCAGAGG...CCCGGTTCCTAACAGGCCACCCATCAGTACTGGTCCGTGGCCCAGGGTTTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp GTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGCGGCCTCTGCAGCATGACTTCGTGTCTTaGTGCTCATTTCCACCACTG +
Preference number: 5 (lower is better)
Translates to: VFLSLCSVPFPAPGRPLQHDFVS*CSFPPL
Trigger: CAGTGGTGGAAATGAGCACAAAGACACGAAGTCATG...CTGCAGAGGCCGCCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS CCA 90 bp TGGTGCCCGCCTGGATGCGTCAATTATTTTGTAGACAACTCCGCGTaGAGCTGTGGCACTCGGCTCCCCTGTCGACATGAAGTACAGCTC +
Preference number: 5 (lower is better)
Translates to: WCPPGCVNYFVDNSA*SCGTRLPCRHEVQL
Trigger: GAGCTGTACTTCATGTCGACAGGGGAGCCGAGTGCCACAGCTCCACGCGGAGTTGTCTACAAAATAATTGACGCATCCAGGCGGGCACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp TGGACAGGCAGCCAGCTCTGCCCTTCTCTGAACTTGTGTCCCAGTGGGGTGGGGGGGATGAACTTTTCTTaGGGCACAAAGGGGATGAGA +
Preference number: 5 (lower is better)
Translates to: WTGSQLCPSLNLCPSGVGGMNFS*GTKGMR
Trigger: TCTCATCCCCTTTGTGCCCAAAGAAAAGTTCATCCC...CCCCACCCCACTGGGACACAAGTTCAGAGAAGGGCAGAGCTGGCTGCCTGTCCA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp GTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACATGGCTTTCAATGCCCTaGAGGTGGCCCAGCAGGAAG +
Preference number: 5 (lower is better)
Translates to: VRKELLPPMMDHALPEPTWLSMP*RWPSRK
Trigger: CTTCCTGCTGGGCCACCTCAAGGGCATTGAAAGCCA...TGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS CCA 90 bp CTCCCCGAAGGAGATGATGTACGGGTAGTAGTTGTTGATGAGGCCTaGGAACTCACAGGTCTGGCCGTGGCCCATGCAGATCTCACTGTA +
Preference number: 5 (lower is better)
Translates to: LPEGDDVRVVVVDEA*ELTGLAVAHADLTV
Trigger: TACAGTGAGATCTGCATGGGCCACGGCCAGACCTGTGAGTTCCCAGGCCTCATCAACAACTACTACCCGTACATCATCTCCTTCGGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS-3UTR CAA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGCAGCGCCGACTTGTTTaGGGCATTTCCAAATGTCCC +
Preference number: 5 (lower is better)
Translates to: RQLAAASMDATSLELSFLQRRLV*GISKCP
Trigger: GGGACATTTGGAAATGCCCAAAACAAGTCGGCGCTG...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp TTTATTCATCAAGTGTTCCTGAGTCTCTGCTCCGTGCCATTCCCAGCACCTGGGTCATTGAGAGAGGTGTaGGCGCACAGGCTGCGGTCG +
Preference number: 5 (lower is better)
Translates to: FIHQVFLSLCSVPFPAPGSLREV*AHRLRS
Trigger: CGACCGCAGCCTGTGCGCCAACACCTCTCTCAATGA...CCCAGGTGCTGGGAATGGCACGGAGCAGAGACTCAGGAACACTTGATGAATAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CAA 90 bp GTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACAGGCCCAAACACAGCTTaGAAAGTAGTGGAGGCCCAC +
Preference number: 5 (lower is better)
Translates to: VRKELLPPMMDHALPEPTGPNTA*KVVEAH
Trigger: GTGGGCCTCCACTACTTTCAAAGCTGTGTTTGGGCC...TGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS CCA 90 bp GGCCTTACAGCTGGATGCGTCAATTATTTTGTAGACAACTCCGCGTaGAGCTGTGGCACTCGGCTCCCCTGTCGACATGAAGTACAGCTC +
Preference number: 5 (lower is better)
Translates to: GLTAGCVNYFVDNSA*SCGTRLPCRHEVQL
Trigger: GAGCTGTACTTCATGTCGACAGGGGAGCCGAGTGCCACAGCTCCACGCGGAGTTGTCTACAAAATAATTGACGCATCCAGCTGTAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS-3UTR CAA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCTGTCCCTGGGTTCTCTaGGAGGGACATCAGACGCCC +
Preference number: 5 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSCPWVL*EGHQTP
Trigger: GGGCGTCTGATGTCCCTCCAAGAGAACCCAGGGACA...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp GGTCAGAGAGGAGGCAGGAAAGTGGTGTGTAAACAGCCACATTATTGGCATAGCAGAGCTCCTGGTCAGTaGACAGGTGACGGAACAGCC +
Preference number: 5 (lower is better)
Translates to: GQRGGRKVVCKQPHYWHSRAPGQ*TGDGTA
Trigger: GGCTGTTCCGTCACCTGTCAACTGACCAGGAGCTCT...GCTATGCCAATAATGTGGCTGTTTACACACCACTTTCCTGCCTCCTCTCTGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp GTAAGAAAGGAACTCCTCCCGCCCATGATGGACCATGCACTTCCAGAGCCCACACTTTCAGAGCAGTGCTaGGCATGTAGTAAGCGCTCA +
Preference number: 5 (lower is better)
Translates to: VRKELLPPMMDHALPEPTLSEQC*ACSKRS
Trigger: TGAGCGCTTACTACATGCCAAGCACTGCTCTGAAAG...TGTGGGCTCTGGAAGTGCATGGTCCATCATGGGCGGGAGGAGTTCCTTTCTTAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGCAGTTTCCAGCTTCCTaGAACCTCCCAAACATTTCT +
Preference number: 5 (lower is better)
Translates to: RQLAAASMDATSLELSFLQFPAS*NLPNIS
Trigger: AGAAATGTTTGGGAGGTTCAAGGAAGCTGGAAACTG...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp GAGGATTACATGAGTGAATGGTATGTTAAACTTTCAGAGCAGTGCTTGGCATGTTCGTCGTGCTCGCAGTaGTGGGTGCCCACGCCGTTG +
Preference number: 5 (lower is better)
Translates to: EDYMSEWYVKLSEQCLACSSCSQ*WVPTPL
Trigger: CAACGGCGTGGGCACCCACAACTGCGAGCACGACGA...ACATGCCAAGCACTGCTCTGAAAGTTTAACATACCATTCACTCATGTAATCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp AGACAGTTGGCTGCTGCCAGCATGGATGCCACCAGCCTCGAACTGAGCTTTCTGCCATCCATGGAAAAATaGTCTTACATGAAACCAGTC +
Preference number: 5 (lower is better)
Translates to: RQLAAASMDATSLELSFLPSMEK*SYMKPV
Trigger: GACTGGTTTCATGTAAGACAATTTTTCCATGGATGG...CAGAAAGCTCAGTTCGAGGCTGGTGGCATCCATGCTGGCAGCAGCCAACTGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCTCATTGAGAGAGGTGTaGGCGCACAGGCTGCGGTCG +
Preference number: 5 (lower is better)
Translates to: TSFKPPCFMLITLCQALFSLREV*AHRLRS
Trigger: CGACCGCAGCCTGTGCGCCAACACCTCTCTCAATGA...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp GAGGATTACATGAGTGAATGGTATGTTAAACTTTCAGAGCAGTGCTTGGCATGTATGATGCCAAAAAGGTaGGGGACCACTGACCTGGGG +
Preference number: 5 (lower is better)
Translates to: EDYMSEWYVKLSEQCLACMMPKR*GTTDLG
Trigger: CCCCAGGTCAGTGGTCCCCAACCTTTTTGGCATCAT...ACATGCCAAGCACTGCTCTGAAAGTTTAACATACCATTCACTCATGTAATCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCATCGGCAGCAAGTCATaGAGAGAGGTGTTGGCGCAC +
Preference number: 5 (lower is better)
Translates to: TSFKPPCFMLITLCQALFIGSKS*REVLAH
Trigger: GTGCGCCAACACCTCTCTCAATGACTTGCTGCCGAT...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCCCCAGCAGCGCCGACTaGTTTTGGGCATTTCCAAAT +
Preference number: 5 (lower is better)
Translates to: TSFKPPCFMLITLCQALFPSSAD*FWAFPN
Trigger: ATTTGGAAATGCCCAAAACAAGTCGGCGCTGCTGGG...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp ACTTCCTTCAAACCTCCTTGCTTTATGCTAATAACTCTTTGTCAAGCCCTATTCTGGTGTCTGAAACGCTaGGAGGTAAGAAAGGAACTC +
Preference number: 5 (lower is better)
Translates to: TSFKPPCFMLITLCQALFWCLKR*EVRKEL
Trigger: GAGTTCCTTTCTTACCTCCAAGCGTTTCAGACACCA...GAATAGGGCTTGACAAAGAGTTATTAGCATAAAGCAAGGAGGTTTGAAGGAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS-3UTR CAA 90 bp GAGGATTACATGAGTGAATGGTATGTTAAACTTTCAGAGCAGTGCTTGGCATGTCACATTATGTTTCTATaGGATAGCACCAGTATGGAC +
Preference number: 5 (lower is better)
Translates to: EDYMSEWYVKLSEQCLACHIMFL*DSTSMD
Trigger: GTCCATACTGGTGCTATCCAATAGAAACATAATGTG...ACATGCCAAGCACTGCTCTGAAAGTTTAACATACCATTCACTCATGTAATCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS GCA 72 bp CCCAGCGTCCGCCCACGAACACCTCCACGCGCCCGCTaGCAGAGCTCAGGCCCGCGGGCCGCACCAGGCGCA +
Preference number: 6 (lower is better)
Translates to: PSVRPRTPPRAR*QSSGPRAAPGA
Trigger: TGCGCCTGGTGCGGCCCGCGGGCCTGAGCTCTGGCAGCGGGCGCGTGGAGGTGTTCGTGGGCGGACGCTGGG
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS TCA 72 bp AGAGGCGCAGCGGCTGCGTCGGCCGGAAGGGCGGCCTaGAGTCCAGGCACTGCGGATGCGCGGCGGCCCCGA +
Preference number: 6 (lower is better)
Translates to: RGAAAASAGRAA*SPGTADARRPR
Trigger: TCGGGGCCGCCGCGCATCCGCAGTGCCTGGACTTCAGGCCGCCCTTCCGGCCGACGCAGCCGCTGCGCCTCT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS GCA 72 bp GGCCCACGTCGCCGCAGAAGAGGCGCCCGCGGCCAGTaGCCGAGGAGGGGTCGCCACGGTCGAAGGAGCAGC +
Preference number: 6 (lower is better)
Translates to: GPRRRRRGARGQ*PRRGRHGRRSS
Trigger: GCTGCTCCTTCGACCGTGGCGACCCCTCCTCGGGCACTGGCCGCGGGCGCCTCTTCTGCGGCGACGTGGGCC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS GCA 72 bp TGCGTCGGCCGGAAGGGCGGCCTGAAGTCCAGGCACTaGGGATGCGCGGCGGCCCCGAGCACCCAAAGCGCC +
Preference number: 6 (lower is better)
Translates to: CVGRKGGLKSRH*GCAAAPSTQSA
Trigger: GGCGCTTTGGGTGCTCGGGGCCGCCGCGCATCCGCAGTGCCTGGACTTCAGGCCGCCCTTCCGGCCGACGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS GCA 72 bp CCGCGGGGTCGCCCACGAACGGGTTGTCGGGCGGGATaGCGTAGGGCAGGCCGCGCTCCTTACGGTCCACGT +
Preference number: 6 (lower is better)
Translates to: PRGRPRTGCRAG*RRAGRAPYGPR
Trigger: ACGTGGACCGTAAGGAGCGCGGCCTGCCCTACGGCATCCCGCCCGACAACCCGTTCGTGGGCGACCCCGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS TCA 72 bp TGGGCAGCGAGCCGCCCTGGCCGAACTCGGCTCTCTTaGCGGCGCGCACGGCGTAGGCAAACCCCAGCTGGC +
Preference number: 6 (lower is better)
Translates to: WAASRPGRTRLS*RRARRRQTPAG
Trigger: GCCAGCTGGGGTTTGCCTACGCCGTGCGCGCCGTCAAGAGAGCCGAGTTCGGCCAGGGCGGCTCGCTGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS GCA 72 bp CCGAAGTCCGAGTACTGCGCGCAGAGGCGCAGCGGCTaGGTCGGCCGGAAGGGCGGCCTGAAGTCCAGGCAC +
Preference number: 6 (lower is better)
Translates to: PKSEYCAQRRSG*VGRKGGLKSRH
Trigger: GTGCCTGGACTTCAGGCCGCCCTTCCGGCCGACGCAGCCGCTGCGCCTCTGCGCGCAGTACTCGGACTTCGG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS GCA 72 bp TCGCGCCCCTCATCGCAGCAGCCGAAGTCCGAGTACTaGGCGCAGAGGCGCAGCGGCTGCGTCGGCCGGAAG +
Preference number: 6 (lower is better)
Translates to: SRPSSQQPKSEY*AQRRSGCVGRK
Trigger: CTTCCGGCCGACGCAGCCGCTGCGCCTCTGCGCGCAGTACTCGGACTTCGGCTGCTGCGATGAGGGGCGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS GCA 72 bp AGGGGTCGCCACGGTCGAAGGAGCAGCGCCACATGTTaGGCACGCCCAGGGCGTAGACCTCGGGCTGCGCCG +
Preference number: 6 (lower is better)
Translates to: RGRHGRRSSATC*ARPGRRPRAAP
Trigger: CGGCGCAGCCCGAGGTCTACGCCCTGGGCGTGCGCAACATGTGGCGCTGCTCCTTCGACCGTGGCGACCCCT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS CCA 72 bp CCGCGCTCCACCACGTCCACCTCCTCGAACTTGTTCTaGCCCACGTCGCCGCAGAAGAGGCGCCCGCGGCCA +
Preference number: 6 (lower is better)
Translates to: PRSTTSTSSNLF*PTSPQKRRPRP
Trigger: TGGCCGCGGGCGCCTCTTCTGCGGCGACGTGGGCCAGAACAAGTTCGAGGAGGTGGACGTGGTGGAGCGCGG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS CCA 72 bp CGCACATCGTCCAGCAGAATGGGCAGCGAGCCGCCCTaGCCGAACTCGGCTCTCTTGACGGCGCGCACGGCG +
Preference number: 6 (lower is better)
Translates to: RTSSSRMGSEPP*PNSALLTARTA
Trigger: CGCCGTGCGCGCCGTCAAGAGAGCCGAGTTCGGCCAGGGCGGCTCGCTGCCCATTCTGCTGGACGATGTGCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS GCA 72 bp TCGTCGTGCTCGCAGTTGTGGGTGCCCACGCCGTTGTaGTGGCACTCCAGCAGGTTCCGCTCCCAGCCCGCG +
Preference number: 6 (lower is better)
Translates to: SSCSQLWVPTPL*WHSSRFRSQPA
Trigger: CGCGGGCTGGGAGCGGAACCTGCTGGAGTGCCAGCACAACGGCGTGGGCACCCACAACTGCGAGCACGACGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS CCA 72 bp GGGCAGCGGCGTGTTGCCTACAGGTCGGGGTTCTGGTaGCTGCACACGACGCCCGCATCCTCGTCGTGCTCG +
Preference number: 6 (lower is better)
Translates to: GQRRVAYRSGFW*LHTTPASSSCS
Trigger: CGAGCACGACGAGGATGCGGGCGTCGTGTGCAGCCACCAGAACCCCGACCTGTAGGCAACACGCCGCTGCCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS CCA 72 bp CTGGGGCAGCGGCGTGTTGCCTACAGGTCGGGGTTCTaGTGGCTGCACACGACGCCCGCATCCTCGTCGTGC +
Preference number: 6 (lower is better)
Translates to: LGQRRVAYRSGF*WLHTTPASSSC
Trigger: GCACGACGAGGATGCGGGCGTCGTGTGCAGCCACCAGAACCCCGACCTGTAGGCAACACGCCGCTGCCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS GCA 72 bp AGCACTCGAACCCTTCGCGCGCGCGCCAGCCATAGTTaGCGCCGCGCTCCACCACGTCCACCTCCTCGAACT +
Preference number: 6 (lower is better)
Translates to: STRTLRARASHS*RRAPPRPPPRT
Trigger: AGTTCGAGGAGGTGGACGTGGTGGAGCGCGGCGGCAACTATGGCTGGCGCGCGCGCGAAGGGTTCGAGTGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS TCA 72 bp AATCCTGGCAGAGCCCGGGCACCGTGCGCAGGGGCGTaGATGGGTCCTCGGCGTCATAGAGGTGGGCTGCAT +
Preference number: 6 (lower is better)
Translates to: NPGRARAPCAGA*MGPRRHRGGLH
Trigger: ATGCAGCCCACCTCTATGACGCCGAGGACCCATTCACGCCCCTGCGCACGGTGCCCGGGCTCTGCCAGGATT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS GCA 72 bp AGCGGCGTGTTGCCTACAGGTCGGGGTTCTGGTGGCTaGACACGACGCCCGCATCCTCGTCGTGCTCGCAGT +
Preference number: 6 (lower is better)
Translates to: SGVLPTGRGSGG*TRRPHPRRARS
Trigger: ACTGCGAGCACGACGAGGATGCGGGCGTCGTGTGCAGCCACCAGAACCCCGACCTGTAGGCAACACGCCGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS TCA 72 bp CCCTCCAGCGCCCAGAGCTCCTGGTCAGTTGACAGGTaGCGGAACAGCCCCCGGCACTTATGCCACATGTCC +
Preference number: 6 (lower is better)
Translates to: PSSAQSSWSVDR*RNSPRHLCHMS
Trigger: GGACATGTGGCATAAGTGCCGGGGGCTGTTCCGTCACCTGTCAACTGACCAGGAGCTCTGGGCGCTGGAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS CAA 72 bp CAAGGTTGCCCTCCAGCGCCCAGAGCTCCTGGTCAGTaGACAGGTGACGGAACAGCCCCCGGCACTTATGCC +
Preference number: 6 (lower is better)
Translates to: QGCPPAPRAPGQ*TGDGTAPGTYA
Trigger: GGCATAAGTGCCGGGGGCTGTTCCGTCACCTGTCAACTGACCAGGAGCTCTGGGCGCTGGAGGGCAACCTTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS TCA 72 bp AAGGTTGCCCTCCAGCGCCCAGAGCTCCTGGTCAGTTaGCAGGTGACGGAACAGCCCCCGGCACTTATGCCA +
Preference number: 6 (lower is better)
Translates to: KVALQRPELLVS*QVTEQPPALMP
Trigger: TGGCATAAGTGCCGGGGGCTGTTCCGTCACCTGTCAACTGACCAGGAGCTCTGGGCGCTGGAGGGCAACCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS GCA 72 bp CATCCAGGGACAGGTAGCGGCAGAACCTGGCAAGGTTaGCCTCCAGCGCCCAGAGCTCCTGGTCAGTTGACA +
Preference number: 6 (lower is better)
Translates to: HPGTGSGRTWQG*PPAPRAPGQLT
Trigger: TGTCAACTGACCAGGAGCTCTGGGCGCTGGAGGGCAACCTTGCCAGGTTCTGCCGCTACCTGTCCCTGGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS CAA 72 bp CCGCGCTCCTTACGGTCCACGTCGATGCGCAGCACCTaGCCCAGCAGCGCCGACTTGTTTTGGGCATTTCCA +
Preference number: 6 (lower is better)
Translates to: PRSLRSTSMRST*PSSADLFWAFP
Trigger: TGGAAATGCCCAAAACAAGTCGGCGCTGCTGGGCAAGGTGCTGCGCATCGACGTGGACCGTAAGGAGCGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS CAA 90 bp AGAACCTGGCAAGGTTGCCCTCCAGCGCCCAGAGCTCCTGGTCAGTaGACAGGTGACGGAACAGCCCCCGGCACTTATGCCACATGTCCA +
Preference number: 6 (lower is better)
Translates to: RTWQGCPPAPRAPGQ*TGDGTAPGTYATCP
Trigger: TGGACATGTGGCATAAGTGCCGGGGGCTGTTCCGTCACCTGTCAACTGACCAGGAGCTCTGGGCGCTGGAGGGCAACCTTGCCAGGTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS GCA 72 bp CGCGCTCCTTACGGTCCACGTCGATGCGCAGCACCTTaGCCAGCAGCGCCGACTTGTTTTGGGCATTTCCAA +
Preference number: 6 (lower is better)
Translates to: RAPYGPRRCAAP*PAAPTCFGHFQ
Trigger: TTGGAAATGCCCAAAACAAGTCGGCGCTGCTGGGCAAGGTGCTGCGCATCGACGTGGACCGTAAGGAGCGCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS CAA 72 bp CTCACTGTACTGCCACTGGCCTGTCCCTGGGTTCTCTaGGAGGGACATCAGACGCCCGCTCATGAAATCCCC +
Preference number: 6 (lower is better)
Translates to: LTVLPLACPWVL*EGHQTPAHEIP
Trigger: GGGGATTTCATGAGCGGGCGTCTGATGTCCCTCCAAGAGAACCCAGGGACAGGCCAGTGGCAGTACAGTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS CCA 72 bp TCACTGTACTGCCACTGGCCTGTCCCTGGGTTCTCTTaGAGGGACATCAGACGCCCGCTCATGAAATCCCCA +
Preference number: 6 (lower is better)
Translates to: SLYCHWPVPGFS*RDIRRPLMKSP
Trigger: TGGGGATTTCATGAGCGGGCGTCTGATGTCCCTCCAAGAGAACCCAGGGACAGGCCAGTGGCAGTACAGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS CCA 72 bp TTGTTGATGAGGCCTGGGAACTCACAGGTCTGGCCGTaGCCCATGCAGATCTCACTGTACTGCCACTGGCCT +
Preference number: 6 (lower is better)
Translates to: LLMRPGNSQVWP*PMQISLYCHWP
Trigger: AGGCCAGTGGCAGTACAGTGAGATCTGCATGGGCCACGGCCAGACCTGTGAGTTCCCAGGCCTCATCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS CCA 72 bp AGCTGCACACGGAAGGAGCTGGGACATAGCCGGGCATaGCGCTTCTGGCCTTACAGCTGGATGCGTCAATTA +
Preference number: 6 (lower is better)
Translates to: SCTRKELGHSRA*RFWPYSWMRQL
Trigger: TAATTGACGCATCCAGCTGTAAGGCCAGAAGCGCCATGCCCGGCTATGTCCCAGCTCCTTCCGTGTGCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS TCA 72 bp GCAGCCCTTGGCATCGGCTACCACGTGGCCCAGGTTTaGGTTGAGGTTCTTGTTGACCAGCAGGTAAGGGAA +
Preference number: 6 (lower is better)
Translates to: AALGIGYHVAQV*VEVLVDQQVRE
Trigger: TTCCCTTACCTGCTGGTCAACAAGAACCTCAACTCAAACCTGGGCCACGTGGTAGCCGATGCCAAGGGCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS CCA 72 bp GGAGATGATGTACGGGTAGTAGTTGTTGATGAGGCCTaGGAACTCACAGGTCTGGCCGTGGCCCATGCAGAT +
Preference number: 6 (lower is better)
Translates to: GDDVRVVVVDEA*ELTGLAVAHAD
Trigger: ATCTGCATGGGCCACGGCCAGACCTGTGAGTTCCCAGGCCTCATCAACAACTACTACCCGTACATCATCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000330710.10
ENST00000357223.2
CDS CCA 72 bp CCTGGATGCGTCAATTATTTTGTAGACAACTCCGCGTaGAGCTGTGGCACTCGGCTCCCCTGTCGACATGAA +
Preference number: 6 (lower is better)
Translates to: PGCVNYFVDNSA*SCGTRLPCRHE
Trigger: TTCATGTCGACAGGGGAGCCGAGTGCCACAGCTCCACGCGGAGTTGTCTACAAAATAATTGACGCATCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000330710.10
CDS CCA 72 bp GCTGGATGCGTCAATTATTTTGTAGACAACTCCGCGTaGAGCTGTGGCACTCGGCTCCCCTGTCGACATGAA +
Preference number: 6 (lower is better)
Translates to: AGCVNYFVDNSA*SCGTRLPCRHE
Trigger: TTCATGTCGACAGGGGAGCCGAGTGCCACAGCTCCACGCGGAGTTGTCTACAAAATAATTGACGCATCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS TCA 72 bp CTTTGTGCTCATTTCCACCACTGTAAAATGAACGGCTaGGACGTCAATGAGCTGCACACGGAAGGAGCTGGG +
Preference number: 6 (lower is better)
Translates to: LCAHFHHCKMNG*DVNELHTEGAG
Trigger: CCCAGCTCCTTCCGTGTGCAGCTCATTGACGTCTCAGCCGTTCATTTTACAGTGGTGGAAATGAGCACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2
CDS TCA 72 bp CTTCGTGTCTTTGTGCTCATTTCCACCACTGTAAAATaGACGGCTGAGACGTCAATGAGCTGCACACGGAAG +
Preference number: 6 (lower is better)
Translates to: LRVFVLISTTVK*TAETSMSCTRK
Trigger: CTTCCGTGTGCAGCTCATTGACGTCTCAGCCGTTCATTTTACAGTGGTGGAAATGAGCACAAAGACACGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000357223.2