RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HEYL (Homo sapiens)

Ensembl gene IDs: ENSG00000163909

Ensembl transcript IDs: ENST00000372852.4

Found 361 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGCACCATCACATGGGGCCACGGCCCCTCTGCACTGTGCACCCAATaGGGAGGGACCACACGCCTGGAGGATGGCGACTGTAAGACGTGG +
Preference number: 1 (lower is better)
Translates to: RTITWGHGPSALCTQ*GGTTRLEDGDCKTW
Trigger: CCACGTCTTACAGTCGCCATCCTCCAGGCGTGTGGTCCCTCCCCATTGGGTGCACAGTGCAGAGGGGCCGTGGCCCCATGTGATGGTGCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR TCA 90 bp CGTGGGAAGGCTGCAGCCAGTCAGTCATTGCTCCTGACTGGGGTCTaGCCGCCCCAAGGAACAGCCTGCCTTGGGTCCTGGTGCCCTGCA +
Preference number: 1 (lower is better)
Translates to: RGKAAASQSLLLTGV*PPQGTACLGSWCPA
Trigger: TGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCTTGGGGCGGTCAGACCCCAGTCAGGAGCAATGACTGACTGGCTGCAGCCTTCCCACG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR TCA 90 bp CAGCCTCTTGGCGTGGGAAGGCTGCAGCCAGTCAGTCATTGCTCCTaGCTGGGGTCTGACCGCCCCAAGGAACAGCCTGCCTTGGGTCCT +
Preference number: 1 (lower is better)
Translates to: QPLGVGRLQPVSHCS*LGSDRPKEQPALGP
Trigger: AGGACCCAAGGCAGGCTGTTCCTTGGGGCGGTCAGACCCCAGTCAGGAGCAATGACTGACTGGCTGCAGCCTTCCCACGCCAAGAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 90 bp GCCTGGAGGATGGCGACTGTAAGACGTGGGGGCTGGGCTCTCCATTaGTCAACCCTGGCTCCTGTCTGGGAGAGCTGTCCAAGGCCTGGT +
Preference number: 1 (lower is better)
Translates to: AWRMATVRRGGWALH*STLAPVWESCPRPG
Trigger: ACCAGGCCTTGGACAGCTCTCCCAGACAGGAGCCAGGGTTGAGCAATGGAGAGCCCAGCCCCCACGTCTTACAGTCGCCATCCTCCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 90 bp CAGGCAGCACAGACGTCTGGTGCTGAATCCCAAGAGGTTCCTCTCTaGGCACCATCACATGGGGCCACGGCCCCTCTGCACTGTGCACCC +
Preference number: 1 (lower is better)
Translates to: QAAQTSGAESQEVPL*APSHGATAPLHCAP
Trigger: GGGTGCACAGTGCAGAGGGGCCGTGGCCCCATGTGATGGTGCGCAGAGAGGAACCTCTTGGGATTCAGCACCAGACGTCTGTGCTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 90 bp CTCTTGGCGTGGGAAGGCTGCAGCCAGTCAGTCATTGCTCCTGACTaGGGTCTGACCGCCCCAAGGAACAGCCTGCCTTGGGTCCTGGTG +
Preference number: 1 (lower is better)
Translates to: LLAWEGCSQSVIAPD*GLTAPRNSLPWVLV
Trigger: CACCAGGACCCAAGGCAGGCTGTTCCTTGGGGCGGTCAGACCCCAGTCAGGAGCAATGACTGACTGGCTGCAGCCTTCCCACGCCAAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 90 bp GAGGGACCACACGCCTGGAGGATGGCGACTGTAAGACGTGGGGGCTaGGCTCTCCATTGCTCAACCCTGGCTCCTGTCTGGGAGAGCTGT +
Preference number: 1 (lower is better)
Translates to: EGPHAWRMATVRRGG*ALHCSTLAPVWESC
Trigger: ACAGCTCTCCCAGACAGGAGCCAGGGTTGAGCAATGGAGAGCCCAGCCCCCACGTCTTACAGTCGCCATCCTCCAGGCGTGTGGTCCCTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 90 bp CAATGGGGAGGGACCACACGCCTGGAGGATGGCGACTGTAAGACGTaGGGGCTGGGCTCTCCATTGCTCAACCCTGGCTCCTGTCTGGGA +
Preference number: 1 (lower is better)
Translates to: QWGGTTRLEDGDCKT*GLGSPLLNPGSCLG
Trigger: TCCCAGACAGGAGCCAGGGTTGAGCAATGGAGAGCCCAGCCCCCACGTCTTACAGTCGCCATCCTCCAGGCGTGTGGTCCCTCCCCATTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 90 bp GAAGCGAGGCAGACACTATGTTCCAGCCTCTTGGCGTGGGAAGGCTaGAGCCAGTCAGTCATTGCTCCTGACTGGGGTCTGACCGCCCCA +
Preference number: 1 (lower is better)
Translates to: EARQTLCSSLLAWEG*SQSVIAPDWGLTAP
Trigger: TGGGGCGGTCAGACCCCAGTCAGGAGCAATGACTGACTGGCTGCAGCCTTCCCACGCCAAGAGGCTGGAACATAGTGTCTGCCTCGCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR TCA 90 bp AGGCCTTGGCTGTGGTGGAGAAAGGGTCTGTCCTGTGGTTCAGTGTaGTGGTGTGGCCCAAGGACAGGTGGGAAGGGGCAGACAGGGTTC +
Preference number: 1 (lower is better)
Translates to: RPWLWWRKGLSCGSV*WCGPRTGGKGQTGF
Trigger: GAACCCTGTCTGCCCCTTCCCACCTGTCCTTGGGCCACACCATCACACTGAACCACAGGACAGACCCTTTCTCCACCACAGCCAAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 90 bp GGTCTGACCGCCCCAAGGAACAGCCTGCCTTGGGTCCTGGTGCCCTaGAGGTTAAAGCTTTTTCCCAGACCCAAGGTTCATGCCTGCTGC +
Preference number: 1 (lower is better)
Translates to: GLTAPRNSLPWVLVP*RLKLFPRPKVHACC
Trigger: GCAGCAGGCATGAACCTTGGGTCTGGGAAAAAGCTTTAACCTGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCTTGGGGCGGTCAGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 90 bp CTGCTGCCTAGAAACCTCCCAGCTGGGTTTACCAGGCCAGCTGTGTaGAGGGACCTGTTAGTCAGTGAGAGGGTGGGTGTCTGCTGCTGG +
Preference number: 1 (lower is better)
Translates to: LLPRNLPAGFTRPAV*RDLLVSERVGVCCW
Trigger: CCAGCAGCAGACACCCACCCTCTCACTGACTAACAGGTCCCTGCACACAGCTGGCCTGGTAAACCCAGCTGGGAGGTTTCTAGGCAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 90 bp GCTGTGGTGGAGAAAGGGTCTGTCCTGTGGTTCAGTGTGATGGTGTaGCCCAAGGACAGGTGGGAAGGGGCAGACAGGGTTCCCAGGAGA +
Preference number: 1 (lower is better)
Translates to: AVVEKGSVLWFSVMV*PKDRWEGADRVPRR
Trigger: TCTCCTGGGAACCCTGTCTGCCCCTTCCCACCTGTCCTTGGGCCACACCATCACACTGAACCACAGGACAGACCCTTTCTCCACCACAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR TCA 90 bp TGCTGCTGGTGTGCAGAGGGCAGGAGAGGGGTCTGGGCGGATCTCTaGGGGTCTCTCCCAGGACTCATCTGTTCAGGTGAGAAATGGAAC +
Preference number: 1 (lower is better)
Translates to: CCWCAEGRRGVWADL*GSLPGLICSGEKWN
Trigger: GTTCCATTTCTCACCTGAACAGATGAGTCCTGGGAGAGACCCTCAGAGATCCGCCCAGACCCCTCTCCTGCCCTCTGCACACCAGCAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR TCA 90 bp GCTCAACCCTGGCTCCTGTCTGGGAGAGCTGTCCAAGGCCTGGTGTaGGGACACCCTGTCACAGAGTTTTGCTGCTGCCTAGAAACCTCC +
Preference number: 1 (lower is better)
Translates to: AQPWLLSGRAVQGLV*GHPVTEFCCCLETS
Trigger: GGAGGTTTCTAGGCAGCAGCAAAACTCTGTGACAGGGTGTCCTCACACCAGGCCTTGGACAGCTCTCCCAGACAGGAGCCAGGGTTGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR TCA 90 bp CTGATTGACAAAGCAAGAGGGAAGACCTTTCTGAGGCCAGGGCAGTaGTCTGGGGGAGGTGATGTGGCCTGGCCAGGATGGCTGTGGGTG +
Preference number: 1 (lower is better)
Translates to: LIDKARGKTFLRPGQ*SGGGDVAWPGWLWV
Trigger: CACCCACAGCCATCCTGGCCAGGCCACATCACCTCCCCCAGATCACTGCCCTGGCCTCAGAAAGGTCTTCCCTCTTGCTTTGTCAATCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR TCA 90 bp AGTCGAGGAAGGCCTCTTGGACGAGGCAACGTTGAAGCCAAGGCCTaGGGGTCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCA +
Preference number: 1 (lower is better)
Translates to: SRGRPLGRGNVEAKA*GSAELSHAQGRGRA
Trigger: TGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGACCCTCAGGCCTTGGCTTCAACGTTGCCTCGTCCAAGAGGCCTTCCTCGACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR TCA 90 bp GCAGGAGAGGAGGAGGAGGAGGAGGAGTTGTCCTTGTTCCTGTCCTaGGTGGGCCCCTTCATGATAACGGGGAAACTGGCCTTTGCCTTC +
Preference number: 1 (lower is better)
Translates to: AGEEEEEEELSLFLS*VGPFMITGKLAFAF
Trigger: GAAGGCAAAGGCCAGTTTCCCCGTTATCATGAAGGGGCCCACTCAGGACAGGAACAAGGACAACTCCTCCTCCTCCTCCTCCTCTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 90 bp GCTCTGTGGAGTCCTGGTGAACAGGATCTCAGGCGCTCGACCCACTaGATGACCTTGAAGGGCCAAGGTGCCTCGAATCATCCTTTCTCT +
Preference number: 1 (lower is better)
Translates to: ALWSPGEQDLRRSTH*MTLKGQGASNHPFS
Trigger: AGAGAAAGGATGATTCGAGGCACCTTGGCCCTTCAAGGTCATGCAGTGGGTCGAGCGCCTGAGATCCTGTTCACCAGGACTCCACAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 90 bp GTTACTATCTCCAGGAAGCGAGGCAGACACTATGTTCCAGCCTCTTaGCGTGGGAAGGCTGCAGCCAGTCAGTCATTGCTCCTGACTGGG +
Preference number: 1 (lower is better)
Translates to: VTISRKRGRHYVPAS*RGKAAASQSLLLTG
Trigger: CCCAGTCAGGAGCAATGACTGACTGGCTGCAGCCTTCCCACGCCAAGAGGCTGGAACATAGTGTCTGCCTCGCTTCCTGGAGATAGTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 90 bp TGGGAAGGGGCAGACAGGGTTCCCAGGAGACCTCTTTGTAGCCCCTaGTCAGTTACTATCTCCAGGAAGCGAGGCAGACACTATGTTCCA +
Preference number: 1 (lower is better)
Translates to: WEGADRVPRRPLCSP*SVTISRKRGRHYVP
Trigger: TGGAACATAGTGTCTGCCTCGCTTCCTGGAGATAGTAACTGAGCAGGGGCTACAAAGAGGTCTCCTGGGAACCCTGTCTGCCCCTTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 90 bp GGAGCATGTGTGAGTTCTGTCTTCCTTCTACCACAGTCTCCCCTCTaGCTCCCTCCGGAGCACTCCCTGCCAATGACCCACTCTCTAAAA +
Preference number: 1 (lower is better)
Translates to: GACVSSVFLLPQSPL*LPPEHSLPMTHSLK
Trigger: TTTTAGAGAGTGGGTCATTGGCAGGGAGTGCTCCGGAGGGAGGCAGAGGGGAGACTGTGGTAGAAGGAAGACAGAACTCACACATGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 90 bp CTCTTGCCCCTCCTTGCAGTTATTTTTGTCCAGCCTGACAGTCCTTaGCTGTTCCAGCAGTCTGGGCTCTGTGAGCCGGATGCAAACCAG +
Preference number: 1 (lower is better)
Translates to: LLPLLAVIFVQPDSP*LFQQSGLCEPDANQ
Trigger: CTGGTTTGCATCCGGCTCACAGAGCCCAGACTGCTGGAACAGCCAAGGACTGTCAGGCTGGACAAAAATAACTGCAAGGAGGGGCAAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 90 bp AGGGTTTCTGCATTTTATCAACTGGTGTGGCAACACTGGTCCCACTaGGTGTCAGTCCAGGCTCCGCTGTTCTGCTGGGAACGACTGCTG +
Preference number: 1 (lower is better)
Translates to: RVSAFYQLVWQHWSH*VSVQAPLFCWERLL
Trigger: CAGCAGTCGTTCCCAGCAGAACAGCGGAGCCTGGACTGACACCCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAATGCAGAAACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 90 bp TCCCACAGCCCCACTAGGGATTCTCAGGCTAGGAAGTTGCCAAACTaGAAGACTACATCACTGACCTGGTATCCCAGGAGCAGCAGGAGA +
Preference number: 1 (lower is better)
Translates to: SHSPTRDSQARKLPN*KTTSLTWYPRSSRR
Trigger: TCTCCTGCTGCTCCTGGGATACCAGGTCAGTGATGTAGTCTTGCAGTTTGGCAACTTCCTAGCCTGAGAATCCCTAGTGGGGCTGTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 90 bp TGGCAACACTGGTCCCACTGGGTGTCAGTCCAGGCTCCGCTGTTCTaGTGGGAACGACTGCTGGACCATTTGTTTCCTCTGTTAGAAAAA +
Preference number: 1 (lower is better)
Translates to: WQHWSHWVSVQAPLF*WERLLDHLFPLLEK
Trigger: TTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAGCGGAGCCTGGACTGACACCCAGTGGGACCAGTGTTGCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 90 bp CAAGGTTTCTGCAAACTCACTTTTCAGTCTGTGGAGTCTCCTCAATaGAGCCTCTGGGGAGGGTGGTTCCATCAAAGGGAGGAGGTGGGA +
Preference number: 1 (lower is better)
Translates to: QGFCKLTFQSVESPQ*SLWGGWFHQREEVG
Trigger: TCCCACCTCCTCCCTTTGATGGAACCACCCTCCCCAGAGGCTGCATTGAGGAGACTCCACAGACTGAAAAGTGAGTTTGCAGAAACCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 90 bp CAACACTGGTCCCACTGGGTGTCAGTCCAGGCTCCGCTGTTCTGCTaGGAACGACTGCTGGACCATTTGTTTCCTCTGTTAGAAAAAGTG +
Preference number: 1 (lower is better)
Translates to: QHWSHWVSVQAPLFC*ERLLDHLFPLLEKV
Trigger: CACTTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAGCGGAGCCTGGACTGACACCCAGTGGGACCAGTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 90 bp GAGTACAGAAGGGTTTCTGCATTTTATCAACTGGTGTGGCAACACTaGTCCCACTGGGTGTCAGTCCAGGCTCCGCTGTTCTGCTGGGAA +
Preference number: 1 (lower is better)
Translates to: EYRRVSAFYQLVWQH*SHWVSVQAPLFCWE
Trigger: TTCCCAGCAGAACAGCGGAGCCTGGACTGACACCCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAATGCAGAAACCCTTCTGTACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 90 bp TGCATGACCTTGAAGGGCCAAGGTGCCTCGAATCATCCTTTCTCTTaGCCCTCCTTGCAGTTATTTTTGTCCAGCCTGACAGTCCTTGGC +
Preference number: 1 (lower is better)
Translates to: CMTLKGQGASNHPFS*PSLQLFLSSLTVLG
Trigger: GCCAAGGACTGTCAGGCTGGACAAAAATAACTGCAAGGAGGGGCAAGAGAAAGGATGATTCGAGGCACCTTGGCCCTTCAAGGTCATGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 90 bp GAGGTGATGTGGCCTGGCCAGGATGGCTGTGGGTGCAGACAGAAGTaGATGGACTCCAGAGATAGTTTAGAAGTAGAATCTACTGGAAGT +
Preference number: 1 (lower is better)
Translates to: EVMWPGQDGCGCRQK*MDSRDSLEVESTGS
Trigger: ACTTCCAGTAGATTCTACTTCTAAACTATCTCTGGAGTCCATCCACTTCTGTCTGCACCCACAGCCATCCTGGCCAGGCCACATCACCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 90 bp ATTTCAGTGGCATCACAGATTCTTTGGAGTTGCATGCTTGCAACGTaGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGG +
Preference number: 1 (lower is better)
Translates to: ISVASQILWSCMLAT*KCVSHSPTRDSQAR
Trigger: CCTAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTGATGCCACTGAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 90 bp GATCATTCCCATCTCATTTCAGTGGCATCACAGATTCTTTGGAGTTaGATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGG +
Preference number: 1 (lower is better)
Translates to: DHSHLISVASQILWS*MLATWKCVSHSPTR
Trigger: CCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTGATGCCACTGAAATGAGATGGGAATGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 90 bp ATCTTTATTGGATGTCCGCAACAACCCATGCAATGGGGTAGGAGTTaGAGACACCAGGAAGGCTTGGGGATAGAAACACAAGATGCAAGT +
Preference number: 1 (lower is better)
Translates to: IFIGCPQQPMQWGRS*RHQEGLGIETQDAS
Trigger: ACTTGCATCTTGTGTTTCTATCCCCAAGCCTTCCTGGTGTCTCCAACTCCTACCCCATTGCATGGGTTGTTGCGGACATCCAATAAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 90 bp ATTCCCATCTCATTTCAGTGGCATCACAGATTCTTTGGAGTTGCATaGTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATT +
Preference number: 1 (lower is better)
Translates to: IPISFQWHHRFFGVA*LQRGNVFPTAPLGI
Trigger: AATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTGATGCCACTGAAATGAGATGGGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 90 bp AGTGGGAGGCACAGTCAACCAACAAGTAAATTACACAAATGGATATaGAGTGGCAAATTCTCCATGAAGGGAAAGAACAGAGGCCTTGTG +
Preference number: 1 (lower is better)
Translates to: SGRHSQPTSKLHKWI*SGKFSMKGKNRGLV
Trigger: CACAAGGCCTCTGTTCTTTCCCTTCATGGAGAATTTGCCACTGCATATCCATTTGTGTAATTTACTTGTTGGTTGACTGTGCCTCCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp GGGGAGGGACCACACGCCTGGAGGATGGCGACTGTAAGACGTGGGGGCTGGGCTTCCAGCCTCTTGGCGTaGGAAGGCTGCAGCCAGTCA +
Preference number: 2 (lower is better)
Translates to: GEGPHAWRMATVRRGGWASSLLA*EGCSQS
Trigger: TGACTGGCTGCAGCCTTCCCACGCCAAGAGGCTGGA...AGCCCAGCCCCCACGTCTTACAGTCGCCATCCTCCAGGCGTGTGGTCCCTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR GCA 90 bp CAAGAGGTTCCTCTCTGCGCACCATCACATGGGGCCACGGCCCCTCTGCACTGTAGGGTGGGTGTCTGCTaGTGGGAGGAGGGTGGGAGC +
Preference number: 2 (lower is better)
Translates to: QEVPLCAPSHGATAPLHCRVGVC*WEEGGS
Trigger: GCTCCCACCCTCCTCCCAGCAGCAGACACCCACCCT...ACAGTGCAGAGGGGCCGTGGCCCCATGTGATGGTGCGCAGAGAGGAACCTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR GCA 90 bp GGGGAGGGACCACACGCCTGGAGGATGGCGACTGTAAGACGTGGGGGCTGGGCTTGGGTCCTGGTGCCCTaGAGGTTAAAGCTTTTTCCC +
Preference number: 2 (lower is better)
Translates to: GEGPHAWRMATVRRGGWAWVLVP*RLKLFP
Trigger: GGGAAAAAGCTTTAACCTGCAGGGCACCAGGACCCA...AGCCCAGCCCCCACGTCTTACAGTCGCCATCCTCCAGGCGTGTGGTCCCTCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp GTCCTTGGCTGTTCCAGCAGTCTGGGCTCTGTGAGCCGGATGCAAACCAGGCAGAGGAACAGCCTGCCTTaGGTCCTGGTGCCCTGCAGG +
Preference number: 2 (lower is better)
Translates to: VLGCSSSLGSVSRMQTRQRNSLP*VLVPCR
Trigger: CCTGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCT...CTGCCTGGTTTGCATCCGGCTCACAGAGCCCAGACTGCTGGAACAGCCAAGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR TCA 90 bp CCAGTCTCCAGGCCTTGGCTGTGGTGGAGAAAGGGTCTGTCCTGTGGTTCAGTGGTCAGTCATTGCTCCTaGCTGGGGTCTGACCGCCCC +
Preference number: 2 (lower is better)
Translates to: PVSRPWLWWRKGLSCGSVVSHCS*LGSDRP
Trigger: GGGGCGGTCAGACCCCAGTCAGGAGCAATGACTGAC...CACTGAACCACAGGACAGACCCTTTCTCCACCACAGCCAAGGCCTGGAGACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR TCA 90 bp CAAGAGGTTCCTCTCTGCGCACCATCACATGGGGCCACGGCCCCTCTGCACTGTGGACCTGTTAGTCAGTaGGAGGGTGGGTGTCTGCTG +
Preference number: 2 (lower is better)
Translates to: QEVPLCAPSHGATAPLHCGPVSQ*EGGCLL
Trigger: CAGCAGACACCCACCCTCTCACTGACTAACAGGTCC...ACAGTGCAGAGGGGCCGTGGCCCCATGTGATGGTGCGCAGAGAGGAACCTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR TCA 90 bp TCTGAGCAGAGCCAGCTCTGTGGAGTCCTGGTGAACAGGATCTCAGGCGCTCGAGCAGTCTGGGCTCTGTaGGCCGGATGCAAACCAGGC +
Preference number: 2 (lower is better)
Translates to: SEQSQLCGVLVNRISGARAVWAL*AGCKPG
Trigger: GCCTGGTTTGCATCCGGCTCACAGAGCCCAGACTGC...TCGAGCGCCTGAGATCCTGTTCACCAGGACTCCACAGAGCTGGCTCTGCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR GCA 90 bp CCTGGCTCCTGTCTGGGAGAGCTGTCCAAGGCCTGGTGTGAGGACACCCTGTCATTGGCGTGGGAAGGCTaGAGCCAGTCAGTCATTGCT +
Preference number: 2 (lower is better)
Translates to: PGSCLGELSKAWCEDTLSLAWEG*SQSVIA
Trigger: AGCAATGACTGACTGGCTGCAGCCTTCCCACGCCAA...TGACAGGGTGTCCTCACACCAGGCCTTGGACAGCTCTCCCAGACAGGAGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp TGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGGGAGCAGGCTCTGCTaGGCCCCCAGTCTCCAGGCC +
Preference number: 2 (lower is better)
Translates to: CLQRGNVFPTAPLGILRLGSRLC*APSLQA
Trigger: GGCCTGGAGACTGGGGGCCCAGCAGAGCCTGCTCCC...TAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR GCA 90 bp CAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGGAAGTGGGCCACGGCCCCTCTaGACTGTGCACCCAATGGGG +
Preference number: 2 (lower is better)
Translates to: QRGNVFPTAPLGILRLGSGPRPL*TVHPMG
Trigger: CCCCATTGGGTGCACAGTGCAGAGGGGCCGTGGCCC...ACTTCCTAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CAA 90 bp GAGAGCTGTCCAAGGCCTGGTGTGAGGACACCCTGTCACAGAGTTTaGCTGCTGCCTAGAAACCTCCCAGCTGGGTTTACCAGGCCAGCT +
Preference number: 2 (lower is better)
Translates to: ESCPRPGVRTPCHRV*LLPRNLPAGFTRPA
Trigger: AGCTGGCCTGGTAAACCCAGCTGGGAGGTTTCTAGGCAGCAGCAAAACTCTGTGACAGGGTGTCCTCACACCAGGCCTTGGACAGCTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CAA 90 bp AGTCCTGGTGAACAGGATCTCAGGCGCTCGACCCACTGCATGACCTaGAAGGGCCAAGGTGCCTCGAATCATCCTTTCTCTTGCCCCTCC +
Preference number: 2 (lower is better)
Translates to: SPGEQDLRRSTHCMT*KGQGASNHPFSCPS
Trigger: GGAGGGGCAAGAGAAAGGATGATTCGAGGCACCTTGGCCCTTCAAGGTCATGCAGTGGGTCGAGCGCCTGAGATCCTGTTCACCAGGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR TCA 90 bp TGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGGAGGAGGGGGCCTCTaGTGGCTGGAGAACGTGCCT +
Preference number: 2 (lower is better)
Translates to: CLQRGNVFPTAPLGILRLGGGGL*WLENVP
Trigger: AGGCACGTTCTCCAGCCATCAGAGGCCCCCTCCTCC...TAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR TCA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGAGTCTGGGCGGATCTCTaGGGGTCTCTCCCAGGACTC +
Preference number: 2 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGVWADL*GSLPGL
Trigger: GAGTCCTGGGAGAGACCCTCAGAGATCCGCCCAGAC...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR GCA 90 bp TGCATTTTATCAACTGGTGTGGCAACACTGGTCCCACTGGGTGTCAGTCCAGGCCCCCAAGGAACAGCCTaGCTTGGGTCCTGGTGCCCT +
Preference number: 2 (lower is better)
Translates to: CILSTGVATLVPLGVSPGPQGTA*LGSWCP
Trigger: AGGGCACCAGGACCCAAGGCAGGCTGTTCCTTGGGG...GCCTGGACTGACACCCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAATGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR TCA 90 bp CCTGGCTCCTGTCTGGGAGAGCTGTCCAAGGCCTGGTGTGAGGACACCCTGTCAACTCATCTGTTCAGGTaGGAAATGGAACCAAGCCTC +
Preference number: 2 (lower is better)
Translates to: PGSCLGELSKAWCEDTLSTHLFR*EMEPSL
Trigger: GAGGCTTGGTTCCATTTCTCACCTGAACAGATGAGT...TGACAGGGTGTCCTCACACCAGGCCTTGGACAGCTCTCCCAGACAGGAGCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR GCA 90 bp GTCCTTGGCTGTTCCAGCAGTCTGGGCTCTGTGAGCCGGATGCAAACCAGGCAGACAGAGTTTTGCTGCTaGCTAGAAACCTCCCAGCTG +
Preference number: 2 (lower is better)
Translates to: VLGCSSSLGSVSRMQTRQTEFCC*LETSQL
Trigger: CAGCTGGGAGGTTTCTAGGCAGCAGCAAAACTCTGT...CTGCCTGGTTTGCATCCGGCTCACAGAGCCCAGACTGCTGGAACAGCCAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CAA 90 bp AGTTACTATCTCCAGGAAGCGAGGCAGACACTATGTTCCAGCCTCTaGGCGTGGGAAGGCTGCAGCCAGTCAGTCATTGCTCCTGACTGG +
Preference number: 2 (lower is better)
Translates to: SYYLQEARQTLCSSL*AWEGCSQSVIAPDW
Trigger: CCAGTCAGGAGCAATGACTGACTGGCTGCAGCCTTCCCACGCCAAGAGGCTGGAACATAGTGTCTGCCTCGCTTCCTGGAGATAGTAACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR GCA 90 bp TCTGAGCAGAGCCAGCTCTGTGGAGTCCTGGTGAACAGGATCTCAGGCGCTCGACCTCTTTGTAGCCCCTaGTCAGTTACTATCTCCAGG +
Preference number: 2 (lower is better)
Translates to: SEQSQLCGVLVNRISGARPLCSP*SVTISR
Trigger: CCTGGAGATAGTAACTGAGCAGGGGCTACAAAGAGG...TCGAGCGCCTGAGATCCTGTTCACCAGGACTCCACAGAGCTGGCTCTGCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR GCA 90 bp TGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTACAGGCTCCGCTGTTCTaGTGGGAACGACTGCTGGAC +
Preference number: 2 (lower is better)
Translates to: CLQRGNVFPTAPLGILRLQAPLF*WERLLD
Trigger: GTCCAGCAGTCGTTCCCAGCAGAACAGCGGAGCCTG...TAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp CAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGGAAGTGTCATTGCTCCTGACTaGGGTCTGACCGCCCCAAGG +
Preference number: 2 (lower is better)
Translates to: QRGNVFPTAPLGILRLGSVIAPD*GLTAPR
Trigger: CCTTGGGGCGGTCAGACCCCAGTCAGGAGCAATGAC...ACTTCCTAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGATCCAGGCCTTGGCTGTaGTGGAGAAAGGGTCTGTCC +
Preference number: 2 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGSRPWL*WRKGLS
Trigger: GGACAGACCCTTTCTCCACCACAGCCAAGGCCTGGA...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGAGAGGGACCACACGCCTaGAGGATGGCGACTGTAAGA +
Preference number: 2 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGEGPHA*RMATVR
Trigger: TCTTACAGTCGCCATCCTCCAGGCGTGTGGTCCCTC...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR GCA 90 bp TGCATTTTATCAACTGGTGTGGCAACACTGGTCCCACTGGGTGTCAGTCCAGGCACCAGGCCAGCTGTGTaGAGGGACCTGTTAGTCAGT +
Preference number: 2 (lower is better)
Translates to: CILSTGVATLVPLGVSPGTRPAV*RDLLVS
Trigger: ACTGACTAACAGGTCCCTGCACACAGCTGGCCTGGT...GCCTGGACTGACACCCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCGCACTGTGCACCCAATaGGGAGGGACCACACGCCTG +
Preference number: 2 (lower is better)
Translates to: HRFFGVACLQRGNVFPTAALCTQ*GGTTRL
Trigger: CAGGCGTGTGGTCCCTCCCCATTGGGTGCACAGTGC...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR TCA 90 bp CAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGGAAGTATGGAACCAAGCCTCTaGGACCAGAACAGCTCCAGG +
Preference number: 2 (lower is better)
Translates to: QRGNVFPTAPLGILRLGSMEPSL*DQNSSR
Trigger: CCTGGAGCTGTTCTGGTCTCAGAGGCTTGGTTCCAT...ACTTCCTAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR TCA 90 bp TGCATTTTATCAACTGGTGTGGCAACACTGGTCCCACTGGGTGTCAGTCCAGGCACAGACGTCTGGTGCTaGATCCCAAGAGGTTCCTCT +
Preference number: 2 (lower is better)
Translates to: CILSTGVATLVPLGVSPGTDVWC*IPRGSS
Trigger: AGAGGAACCTCTTGGGATTCAGCACCAGACGTCTGT...GCCTGGACTGACACCCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAATGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR GCA 90 bp TTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTACCCAAGGTTCATGCCTaGTGCTGGTGTGCAGAGGGC +
Preference number: 2 (lower is better)
Translates to: FFGVACLQRGNVFPTAPLPKVHA*CWCAEG
Trigger: GCCCTCTGCACACCAGCAGCAGGCATGAACCTTGGG...TAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGATTCAGTGTGATGGTGTaGCCCAAGGACAGGTGGGAA +
Preference number: 2 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGFSVMV*PKDRWE
Trigger: TTCCCACCTGTCCTTGGGCCACACCATCACACTGAA...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp CAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGGAAGTTCCATTGCTCAACCCTaGCTCCTGTCTGGGAGAGCT +
Preference number: 2 (lower is better)
Translates to: QRGNVFPTAPLGILRLGSSIAQP*LLSGRA
Trigger: AGCTCTCCCAGACAGGAGCCAGGGTTGAGCAATGGA...ACTTCCTAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp TGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGCAGAGCCAGCTCTGTaGAGTCCTGGTGAACAGGAT +
Preference number: 2 (lower is better)
Translates to: CLQRGNVFPTAPLGILRLAEPAL*SPGEQD
Trigger: ATCCTGTTCACCAGGACTCCACAGAGCTGGCTCTGC...TAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCGCACCAGTGAACTGCTaGCTCTGGGACTCCACAGCC +
Preference number: 2 (lower is better)
Translates to: HRFFGVACLQRGNVFPTAAPVNC*LWDSTA
Trigger: GGCTGTGGAGTCCCAGAGCCAGCAGTTCACTGGTGC...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CAA 90 bp TTGAAGGGCCAAGGTGCCTCGAATCATCCTTTCTCTTGCCCCTCCTaGCAGTTATTTTTGTCCAGCCTGACAGTCCTTGGCTGTTCCAGC +
Preference number: 2 (lower is better)
Translates to: LKGQGASNHPFSCPS*QLFLSSLTVLGCSS
Trigger: GCTGGAACAGCCAAGGACTGTCAGGCTGGACAAAAATAACTGCAAGGAGGGGCAAGAGAAAGGATGATTCGAGGCACCTTGGCCCTTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR TCA 90 bp ACTCGAGTGGGAGGCACAGTCAACCAACAAGTAAATTACACAAATGGATATGCACTCCTGACTGGGGTCTaGCCGCCCCAAGGAACAGCC +
Preference number: 2 (lower is better)
Translates to: TRVGGTVNQQVNYTNGYALLTGV*PPQGTA
Trigger: GGCTGTTCCTTGGGGCGGTCAGACCCCAGTCAGGAG...TGCATATCCATTTGTGTAATTTACTTGTTGGTTGACTGTGCCTCCCACTCGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR TCA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCTCTGTGGAGTCCTGGTaGACAGGATCTCAGGCGCTC +
Preference number: 2 (lower is better)
Translates to: HRFFGVACLQRGNVFPTASVESW*TGSQAL
Trigger: GAGCGCCTGAGATCCTGTTCACCAGGACTCCACAGA...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR GCA 90 bp TGCATTTTATCAACTGGTGTGGCAACACTGGTCCCACTGGGTGTCAGTCCAGGCCCTGTCACAGAGTTTTaGTGCTGCCTAGAAACCTCC +
Preference number: 2 (lower is better)
Translates to: CILSTGVATLVPLGVSPGPVTEF*CCLETS
Trigger: GGAGGTTTCTAGGCAGCAGCAAAACTCTGTGACAGG...GCCTGGACTGACACCCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp TTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAACCTTCCTTATTCCTTaGGGCGGGGTGGTGAAGGGG +
Preference number: 2 (lower is better)
Translates to: FFGVACLQRGNVFPTAPLTFLIP*GGVVKG
Trigger: CCCCTTCACCACCCCGCCCCAAGGAATAAGGAAGGT...TAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp TTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGAGCTGTCCAAGGCCTaGTGTGAGGACACCCTGTCA +
Preference number: 2 (lower is better)
Translates to: FFGVACLQRGNVFPTAPLELSKA*CEDTLS
Trigger: TGACAGGGTGTCCTCACACCAGGCCTTGGACAGCTC...TAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp CTGTTCTGCTGGGAACGACTGCTGGACCATTTGTTTCCTCTGTTAGAAAAAGTGGGCGACTGTAAGACGTaGGGGCTGGGCTCTCCATTG +
Preference number: 2 (lower is better)
Translates to: LFCWERLLDHLFPLLEKVGDCKT*GLGSPL
Trigger: CAATGGAGAGCCCAGCCCCCACGTCTTACAGTCGCC...CACTTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CAA 90 bp AAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGGAAGTaGCCAAACTGCAAGACTACATCACTGACCTGGTATCCCAGGAGC +
Preference number: 2 (lower is better)
Translates to: KCVSHSPTRDSQARK*PNCKTTSLTWYPRS
Trigger: GCTCCTGGGATACCAGGTCAGTGATGTAGTCTTGCAGTTTGGCAACTTCCTAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR GCA 90 bp CAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGGAAGTGTCACAGAGTTTTGCTaGTGCCTAGAAACCTCCCAG +
Preference number: 2 (lower is better)
Translates to: QRGNVFPTAPLGILRLGSVTEFC*CLETSQ
Trigger: CTGGGAGGTTTCTAGGCAGCAGCAAAACTCTGTGAC...ACTTCCTAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp TGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTATCCAGGAGAGCTGGGTaGATAAGCTGGGATAACAGT +
Preference number: 2 (lower is better)
Translates to: CLQRGNVFPTAPLGILRLSRRAG*ISWDNS
Trigger: ACTGTTATCCCAGCTTATCCACCCAGCTCTCCTGGA...TAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp CTGTTCTGCTGGGAACGACTGCTGGACCATTTGTTTCCTCTGTTAGAAAAAGTGCCAGTCTCCAGGCCTTaGCTGTGGTGGAGAAAGGGT +
Preference number: 2 (lower is better)
Translates to: LFCWERLLDHLFPLLEKVPVSRP*LWWRKG
Trigger: ACCCTTTCTCCACCACAGCCAAGGCCTGGAGACTGG...CACTTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCAGCCGGGGAATGAAATaGCTTCTGAGCAGAGCCAGC +
Preference number: 2 (lower is better)
Translates to: HRFFGVACLQRGNVFPTASRGMK*LLSRAS
Trigger: GCTGGCTCTGCTCAGAAGCCATTTCATTCCCCGGCT...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGATTTTATCAACTGGTGTaGCAACACTGGTCCCACTGG +
Preference number: 2 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGFYQLV*QHWSHW
Trigger: CCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAA...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGAGCACCTGGAGTCACTTaGGGGAGTAGATATTTACCA +
Preference number: 2 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGAPGVT*GSRYLP
Trigger: TGGTAAATATCTACTCCCCCAAGTGACTCCAGGTGC...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR GCA 90 bp TTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTACCCTCTCCTTGCTACTaGACATCTCAGATGGGTCCA +
Preference number: 2 (lower is better)
Translates to: FFGVACLQRGNVFPTAPLPSPCY*TSQMGP
Trigger: TGGACCCATCTGAGATGTGCAGTAGCAAGGAGAGGG...TAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp ATATTTACCAACGAGTACAGAAGGGTTTCTGCATTTTATCAACTGGTGTGGCAACTGCGCACCATCACATaGGGCCACGGCCCCTCTGCA +
Preference number: 2 (lower is better)
Translates to: IFTNEYRRVSAFYQLVWQLRTIT*GHGPSA
Trigger: TGCAGAGGGGCCGTGGCCCCATGTGATGGTGCGCAG...TTGCCACACCAGTTGATAAAATGCAGAAACCCTTCTGTACTCGTTGGTAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CAA 90 bp CCCATCTCATTTCAGTGGCATCACAGATTCTTTGGAGTTGCATGCTaGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTC +
Preference number: 2 (lower is better)
Translates to: PISFQWHHRFFGVAC*QRGNVFPTAPLGIL
Trigger: GAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTGATGCCACTGAAATGAGATGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR TCA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGAATATCCCAGGGACAATaGAAGCAAGTTCAACCAAGA +
Preference number: 2 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGISQGQ*KQVQPR
Trigger: TCTTGGTTGAACTTGCTTTCATTGTCCCTGGGATAT...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR GCA 90 bp ACTCGAGTGGGAGGCACAGTCAACCAACAAGTAAATTACACAAATGGATATGCACAAGAGGTTCCTCTCTaGGCACCATCACATGGGGCC +
Preference number: 2 (lower is better)
Translates to: TRVGGTVNQQVNYTNGYAQEVPL*APSHGA
Trigger: GGCCCCATGTGATGGTGCGCAGAGAGGAACCTCTTG...TGCATATCCATTTGTGTAATTTACTTGTTGGTTGACTGTGCCTCCCACTCGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR GCA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCTTGAAGGGCCAAGGTaGCTCGAATCATCCTTTCTC +
Preference number: 2 (lower is better)
Translates to: HRFFGVACLQRGNVFPTALEGPR*LESSFL
Trigger: GAGAAAGGATGATTCGAGGCACCTTGGCCCTTCAAG...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCGCTGGGAACGACTGCTaGACCATTTGTTTCCTCTGT +
Preference number: 2 (lower is better)
Translates to: HRFFGVACLQRGNVFPTAAGNDC*TICFLC
Trigger: ACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGC...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp CTGTTCTGCTGGGAACGACTGCTGGACCATTTGTTTCCTCTGTTAGAAAAAGTGGCTGGGTGGATAAGCTaGGATAACAGTGAGAAGGAG +
Preference number: 2 (lower is better)
Translates to: LFCWERLLDHLFPLLEKVAGWIS*DNSEKE
Trigger: CTCCTTCTCACTGTTATCCCAGCTTATCCACCCAGC...CACTTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCTGTTCAGGTGAGAAATaGAACCAAGCCTCTGAGACC +
Preference number: 2 (lower is better)
Translates to: HRFFGVACLQRGNVFPTACSGEK*NQASET
Trigger: GGTCTCAGAGGCTTGGTTCCATTTCTCACCTGAACA...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CAA 90 bp GAGACACCAGGAAGGCTTGGGGATAGAAACACAAGATGCAAGTCCTaGACCACAGAATCAGATCACACAGTCACCTTTCCTTCCACAATA +
Preference number: 2 (lower is better)
Translates to: ETPGRLGDRNTRCKS*TTESDHTVTFPSTI
Trigger: TATTGTGGAAGGAAAGGTGACTGTGTGATCTGATTCTGTGGTCAAGGACTTGCATCTTGTGTTTCTATCCCCAAGCCTTCCTGGTGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR TCA 90 bp CAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGGAAGTCTCTTTATCTCTCCTTaGGGAGTCTGTCTTTTCAAA +
Preference number: 2 (lower is better)
Translates to: QRGNVFPTAPLGILRLGSLFISP*GVCLFK
Trigger: TTTGAAAAGACAGACTCCTCAAGGAGAGATAAAGAG...ACTTCCTAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR GCA 90 bp ATATTTACCAACGAGTACAGAAGGGTTTCTGCATTTTATCAACTGGTGTGGCAAAAGGTTCATGCCTGCTaGTGGTGTGCAGAGGGCAGG +
Preference number: 2 (lower is better)
Translates to: IFTNEYRRVSAFYQLVWQKVHAC*WCAEGR
Trigger: CCTGCCCTCTGCACACCAGCAGCAGGCATGAACCTT...TTGCCACACCAGTTGATAAAATGCAGAAACCCTTCTGTACTCGTTGGTAAATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CCA 90 bp ACTCGAGTGGGAGGCACAGTCAACCAACAAGTAAATTACACAAATGGATATGCAAAAGGGTCTGTCCTGTaGTTCAGTGTGATGGTGTGG +
Preference number: 2 (lower is better)
Translates to: TRVGGTVNQQVNYTNGYAKGSVL*FSVMVW
Trigger: CCACACCATCACACTGAACCACAGGACAGACCCTTT...TGCATATCCATTTGTGTAATTTACTTGTTGGTTGACTGTGCCTCCCACTCGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR TCA 90 bp ACTCGAGTGGGAGGCACAGTCAACCAACAAGTAAATTACACAAATGGATATGCATCTCTCTGCTGCTACTaGGAACTGATTGACAAAGCA +
Preference number: 2 (lower is better)
Translates to: TRVGGTVNQQVNYTNGYASLCCY*ELIDKA
Trigger: TGCTTTGTCAATCAGTTCTCAGTAGCAGCAGAGAGA...TGCATATCCATTTGTGTAATTTACTTGTTGGTTGACTGTGCCTCCCACTCGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR GCA 90 bp ATATTTACCAACGAGTACAGAAGGGTTTCTGCATTTTATCAACTGGTGTGGCAATCTGCTGGGAACGACTaGTGGACCATTTGTTTCCTC +
Preference number: 2 (lower is better)
Translates to: IFTNEYRRVSAFYQLVWQSAGND*WTICFL
Trigger: GAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGA...TTGCCACACCAGTTGATAAAATGCAGAAACCCTTCTGTACTCGTTGGTAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR TCA 72 bp GCTGCAGCCAGTCAGTCATTGCTCCTGACTGGGGTCTaGCCGCCCCAAGGAACAGCCTGCCTTGGGTCCTGG +
Preference number: 3 (lower is better)
Translates to: AAASQSLLLTGV*PPQGTACLGSW
Trigger: CCAGGACCCAAGGCAGGCTGTTCCTTGGGGCGGTCAGACCCCAGTCAGGAGCAATGACTGACTGGCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 72 bp CACGCCTGGAGGATGGCGACTGTAAGACGTGGGGGCTaGGCTCTCCATTGCTCAACCCTGGCTCCTGTCTGG +
Preference number: 3 (lower is better)
Translates to: HAWRMATVRRGG*ALHCSTLAPVW
Trigger: CCAGACAGGAGCCAGGGTTGAGCAATGGAGAGCCCAGCCCCCACGTCTTACAGTCGCCATCCTCCAGGCGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 72 bp CAGACGTCTGGTGCTGAATCCCAAGAGGTTCCTCTCTaGGCACCATCACATGGGGCCACGGCCCCTCTGCAC +
Preference number: 3 (lower is better)
Translates to: QTSGAESQEVPL*APSHGATAPLH
Trigger: GTGCAGAGGGGCCGTGGCCCCATGTGATGGTGCGCAGAGAGGAACCTCTTGGGATTCAGCACCAGACGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 72 bp TGGGAAGGCTGCAGCCAGTCAGTCATTGCTCCTGACTaGGGTCTGACCGCCCCAAGGAACAGCCTGCCTTGG +
Preference number: 3 (lower is better)
Translates to: WEGCSQSVIAPD*GLTAPRNSLPW
Trigger: CCAAGGCAGGCTGTTCCTTGGGGCGGTCAGACCCCAGTCAGGAGCAATGACTGACTGGCTGCAGCCTTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 72 bp ATGGCGACTGTAAGACGTGGGGGCTGGGCTCTCCATTaGTCAACCCTGGCTCCTGTCTGGGAGAGCTGTCCA +
Preference number: 3 (lower is better)
Translates to: MATVRRGGWALH*STLAPVWESCP
Trigger: TGGACAGCTCTCCCAGACAGGAGCCAGGGTTGAGCAATGGAGAGCCCAGCCCCCACGTCTTACAGTCGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CAA 90 bp TCTGAGCAGAGCCAGCTCTGTGGAGTCCTGGTGAACAGGATCTCAGGCGCTCGACTATGTTCCAGCCTCTaGGCGTGGGAAGGCTGCAGC +
Preference number: 3 (lower is better)
Translates to: SEQSQLCGVLVNRISGARLCSSL*AWEGCS
Trigger: GCTGCAGCCTTCCCACGCCAAGAGGCTGGAACATAG...TCGAGCGCCTGAGATCCTGTTCACCAGGACTCCACAGAGCTGGCTCTGCTCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR TCA 72 bp TGGCTTCTGAGCAGAGCCAGCTCTGTGGAGTCCTGGTaGACAGGATCTCAGGCGCTCGACCCACTGCATGAC +
Preference number: 3 (lower is better)
Translates to: WLLSRASSVESW*TGSQALDPLHD
Trigger: GTCATGCAGTGGGTCGAGCGCCTGAGATCCTGTTCACCAGGACTCCACAGAGCTGGCTCTGCTCAGAAGCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR TCA 72 bp AGGCCTCTTGGACGAGGCAACGTTGAAGCCAAGGCCTaGGGGTCTGCAGAACTCAGCCATGCACAGGGTAGG +
Preference number: 3 (lower is better)
Translates to: RPLGRGNVEAKA*GSAELSHAQGR
Trigger: CCTACCCTGTGCATGGCTGAGTTCTGCAGACCCTCAGGCCTTGGCTTCAACGTTGCCTCGTCCAAGAGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 72 bp CAGGCCTTGGCTGTGGTGGAGAAAGGGTCTGTCCTGTaGTTCAGTGTGATGGTGTGGCCCAAGGACAGGTGG +
Preference number: 3 (lower is better)
Translates to: QALAVVEKGSVL*FSVMVWPKDRW
Trigger: CCACCTGTCCTTGGGCCACACCATCACACTGAACCACAGGACAGACCCTTTCTCCACCACAGCCAAGGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CAA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGAGGGCTGGGCTCTCCATaGCTCAACCCTGGCTCCTGT +
Preference number: 3 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGGLGSP*LNPGSC
Trigger: ACAGGAGCCAGGGTTGAGCAATGGAGAGCCCAGCCC...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR TCA 72 bp GCCGGATGCAAACCAGGCAGCACAGACGTCTGGTGCTaGATCCCAAGAGGTTCCTCTCTGCGCACCATCACA +
Preference number: 3 (lower is better)
Translates to: AGCKPGSTDVWC*IPRGSSLRTIT
Trigger: TGTGATGGTGCGCAGAGAGGAACCTCTTGGGATTCAGCACCAGACGTCTGTGCTGCCTGGTTTGCATCCGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR TCA 72 bp GAGGAGGAGGAGGAGGAGTTGTCCTTGTTCCTGTCCTaGGTGGGCCCCTTCATGATAACGGGGAAACTGGCC +
Preference number: 3 (lower is better)
Translates to: EEEEEELSLFLS*VGPFMITGKLA
Trigger: GGCCAGTTTCCCCGTTATCATGAAGGGGCCCACTCAGGACAGGAACAAGGACAACTCCTCCTCCTCCTCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 72 bp AGAAACCTCCCAGCTGGGTTTACCAGGCCAGCTGTGTaGAGGGACCTGTTAGTCAGTGAGAGGGTGGGTGTC +
Preference number: 3 (lower is better)
Translates to: RNLPAGFTRPAV*RDLLVSERVGV
Trigger: GACACCCACCCTCTCACTGACTAACAGGTCCCTGCACACAGCTGGCCTGGTAAACCCAGCTGGGAGGTTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 72 bp TGGTCCCACTGGGTGTCAGTCCAGGCTCCGCTGTTCTaGTGGGAACGACTGCTGGACCATTTGTTTCCTCTG +
Preference number: 3 (lower is better)
Translates to: WSHWVSVQAPLF*WERLLDHLFPL
Trigger: CAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAGCGGAGCCTGGACTGACACCCAGTGGGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 72 bp TCCAGGAAGCGAGGCAGACACTATGTTCCAGCCTCTTaGCGTGGGAAGGCTGCAGCCAGTCAGTCATTGCTC +
Preference number: 3 (lower is better)
Translates to: SRKRGRHYVPAS*RGKAAASQSLL
Trigger: GAGCAATGACTGACTGGCTGCAGCCTTCCCACGCCAAGAGGCTGGAACATAGTGTCTGCCTCGCTTCCTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 72 bp GAGAAAGGGTCTGTCCTGTGGTTCAGTGTGATGGTGTaGCCCAAGGACAGGTGGGAAGGGGCAGACAGGGTT +
Preference number: 3 (lower is better)
Translates to: EKGSVLWFSVMV*PKDRWEGADRV
Trigger: AACCCTGTCTGCCCCTTCCCACCTGTCCTTGGGCCACACCATCACACTGAACCACAGGACAGACCCTTTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CAA 90 bp CAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGGAAGTAAGGAACAGCCTGCCTaGGGTCCTGGTGCCCTGCAG +
Preference number: 3 (lower is better)
Translates to: QRGNVFPTAPLGILRLGSKEQPA*GPGALQ
Trigger: CTGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCTT...ACTTCCTAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR TCA 72 bp GAGTGGAGACTGAACCAGGCATGGCACCTGGCCTCATaGGCTTACACTCGAGTGGGAGGCACAGTCAACCAA +
Preference number: 3 (lower is better)
Translates to: EWRLNQAWHLAS*AYTRVGGTVNQ
Trigger: TTGGTTGACTGTGCCTCCCACTCGAGTGTAAGCTCATGAGGCCAGGTGCCATGCCTGGTTCAGTCTCCACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 72 bp GCCCCAAGGAACAGCCTGCCTTGGGTCCTGGTGCCCTaGAGGTTAAAGCTTTTTCCCAGACCCAAGGTTCAT +
Preference number: 3 (lower is better)
Translates to: APRNSLPWVLVP*RLKLFPRPKVH
Trigger: ATGAACCTTGGGTCTGGGAAAAAGCTTTAACCTGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCTTGGGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 72 bp AGTCCTGGTGAACAGGATCTCAGGCGCTCGACCCACTaGATGACCTTGAAGGGCCAAGGTGCCTCGAATCAT +
Preference number: 3 (lower is better)
Translates to: SPGEQDLRRSTH*MTLKGQGASNH
Trigger: ATGATTCGAGGCACCTTGGCCCTTCAAGGTCATGCAGTGGGTCGAGCGCCTGAGATCCTGTTCACCAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 72 bp GGGGAGGTGATGTGGCCTGGCCAGGATGGCTGTGGGTaGAGACAGAAGTGGATGGACTCCAGAGATAGTTTA +
Preference number: 3 (lower is better)
Translates to: GEVMWPGQDGCG*RQKWMDSRDSL
Trigger: TAAACTATCTCTGGAGTCCATCCACTTCTGTCTGCACCCACAGCCATCCTGGCCAGGCCACATCACCTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 72 bp AGAAAAAGTGGCCTAGGGTGGAGCCGGGGAATGAAATaGCTTCTGAGCAGAGCCAGCTCTGTGGAGTCCTGG +
Preference number: 3 (lower is better)
Translates to: RKSGLGWSRGMK*LLSRASSVESW
Trigger: CCAGGACTCCACAGAGCTGGCTCTGCTCAGAAGCCATTTCATTCCCCGGCTCCACCCTAGGCCACTTTTTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 72 bp TCCCACTGGGTGTCAGTCCAGGCTCCGCTGTTCTGCTaGGAACGACTGCTGGACCATTTGTTTCCTCTGTTA +
Preference number: 3 (lower is better)
Translates to: SHWVSVQAPLFC*ERLLDHLFPLL
Trigger: TAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAGCGGAGCCTGGACTGACACCCAGTGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 72 bp GCATTTTATCAACTGGTGTGGCAACACTGGTCCCACTaGGTGTCAGTCCAGGCTCCGCTGTTCTGCTGGGAA +
Preference number: 3 (lower is better)
Translates to: AFYQLVWQHWSH*VSVQAPLFCWE
Trigger: TTCCCAGCAGAACAGCGGAGCCTGGACTGACACCCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CAA 90 bp TGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAAACCTTCCTTATTCCTaGGGGCGGGGTGGTGAAGGG +
Preference number: 3 (lower is better)
Translates to: CLQRGNVFPTAPLGILRLNLPYS*GRGGEG
Trigger: CCCTTCACCACCCCGCCCCAAGGAATAAGGAAGGTT...TAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CAA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCCAGTCTCCAGGCCTaGGCTGTGGTGGAGAAAGGG +
Preference number: 3 (lower is better)
Translates to: HRFFGVACLQRGNVFPTAPSLQA*AVVEKG
Trigger: CCCTTTCTCCACCACAGCCAAGGCCTGGAGACTGGG...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 72 bp GACCAGAACAGCTCCAGGAGAGCTGGGTGGATAAGCTaGGATAACAGTGAGAAGGAGAGATGGGTTGGAGGA +
Preference number: 3 (lower is better)
Translates to: DQNSSRRAGWIS*DNSEKERWVGG
Trigger: TCCTCCAACCCATCTCTCCTTCTCACTGTTATCCCAGCTTATCCACCCAGCTCTCCTGGAGCTGTTCTGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 72 bp CTCCTTGCAGTTATTTTTGTCCAGCCTGACAGTCCTTaGCTGTTCCAGCAGTCTGGGCTCTGTGAGCCGGAT +
Preference number: 3 (lower is better)
Translates to: LLAVIFVQPDSP*LFQQSGLCEPD
Trigger: ATCCGGCTCACAGAGCCCAGACTGCTGGAACAGCCAAGGACTGTCAGGCTGGACAAAAATAACTGCAAGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CAA 90 bp CAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGGAAGTCGGGGAAACTGGCCTTaGCCTTCTGTTACCTCCTCT +
Preference number: 3 (lower is better)
Translates to: QRGNVFPTAPLGILRLGSRGNWP*PSVTSS
Trigger: AGAGGAGGTAACAGAAGGCAAAGGCCAGTTTCCCCG...ACTTCCTAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 72 bp TGCAAACTCACTTTTCAGTCTGTGGAGTCTCCTCAATaGAGCCTCTGGGGAGGGTGGTTCCATCAAAGGGAG +
Preference number: 3 (lower is better)
Translates to: CKLTFQSVESPQ*SLWGGWFHQRE
Trigger: CTCCCTTTGATGGAACCACCCTCCCCAGAGGCTGCATTGAGGAGACTCCACAGACTGAAAAGTGAGTTTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR GCA 72 bp CCCACTAGGGATTCTCAGGCTAGGAAGTTGCCAAACTaGAAGACTACATCACTGACCTGGTATCCCAGGAGC +
Preference number: 3 (lower is better)
Translates to: PTRDSQARKLPN*KTTSLTWYPRS
Trigger: GCTCCTGGGATACCAGGTCAGTGATGTAGTCTTGCAGTTTGGCAACTTCCTAGCCTGAGAATCCCTAGTGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 72 bp GAGTACAGAAGGGTTTCTGCATTTTATCAACTGGTGTaGCAACACTGGTCCCACTGGGTGTCAGTCCAGGCT +
Preference number: 3 (lower is better)
Translates to: EYRRVSAFYQLV*QHWSHWVSVQA
Trigger: AGCCTGGACTGACACCCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAATGCAGAAACCCTTCTGTACTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CAA 90 bp ACTCGAGTGGGAGGCACAGTCAACCAACAAGTAAATTACACAAATGGATATGCATGGGACTCCACAGCCTaGGATCGGCCAGGCAGTAAC +
Preference number: 3 (lower is better)
Translates to: TRVGGTVNQQVNYTNGYAWDSTA*DRPGSN
Trigger: GTTACTGCCTGGCCGATCCAAGGCTGTGGAGTCCCA...TGCATATCCATTTGTGTAATTTACTTGTTGGTTGACTGTGCCTCCCACTCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CCA 72 bp GCATCACAGATTCTTTGGAGTTGCATGCTTGCAACGTaGAAATGTGTTTCCCACAGCCCCACTAGGGATTCT +
Preference number: 3 (lower is better)
Translates to: ASQILWSCMLAT*KCVSHSPTRDS
Trigger: AGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTGATGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR TCA 72 bp GAAGGCTTGGGGATAGAAACACAAGATGCAAGTCCTTaGCCACAGAATCAGATCACACAGTCACCTTTCCTT +
Preference number: 3 (lower is better)
Translates to: EGLGIETQDASP*PQNQITQSPFL
Trigger: AAGGAAAGGTGACTGTGTGATCTGATTCTGTGGTCAAGGACTTGCATCTTGTGTTTCTATCCCCAAGCCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR-3UTR CAA 90 bp ACTCGAGTGGGAGGCACAGTCAACCAACAAGTAAATTACACAAATGGATATGCAAGACACCAGGAAGGCTaGGGGATAGAAACACAAGAT +
Preference number: 3 (lower is better)
Translates to: TRVGGTVNQQVNYTNGYARHQEG*GIETQD
Trigger: ATCTTGTGTTTCTATCCCCAAGCCTTCCTGGTGTCT...TGCATATCCATTTGTGTAATTTACTTGTTGGTTGACTGTGCCTCCCACTCGAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR TCA 72 bp TATGACCTGCAGCTTTCAATTTCTCTCTGCTGCTACTaGGAACTGATTGACAAAGCAAGAGGGAAGACCTTT +
Preference number: 3 (lower is better)
Translates to: YDLQLSISLCCY*ELIDKARGKTF
Trigger: AAAGGTCTTCCCTCTTGCTTTGTCAATCAGTTCTCAGTAGCAGCAGAGAGAAATTGAAAGCTGCAGGTCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp GGGGAGGGACCACACGCCTGGAGGATGGCGACTGTAAGACGTGGGGGCTGGGCTAGGCCAAAGGGCCAGTaGGCGTGGGCGAAGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GEGPHAWRMATVRRGGWARPKGQ*AWAKAP
Trigger: TGGAGCCTTCGCCCACGCCCACTGGCCCTTTGGCCT...AGCCCAGCCCCCACGTCTTACAGTCGCCATCCTCCAGGCGTGTGGTCCCTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp GGGGAGGGACCACACGCCTGGAGGATGGCGACTGTAAGACGTGGGGGCTGGGCTCGGGGAGGACAGGGCTaGGCACTCTTCCCAGGATGG +
Preference number: 4 (lower is better)
Translates to: GEGPHAWRMATVRRGGWARGGQG*ALFPGW
Trigger: CCATCCTGGGAAGAGTGCCCAGCCCTGTCCTCCCCG...AGCCCAGCCCCCACGTCTTACAGTCGCCATCCTCCAGGCGTGTGGTCCCTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp GGGGAGGGACCACACGCCTGGAGGATGGCGACTGTAAGACGTGGGGGCTGGGCTGTCTGGGCGGATCTCTaGGGGTCTCTCCCAGGACTC +
Preference number: 4 (lower is better)
Translates to: GEGPHAWRMATVRRGGWAVWADL*GSLPGL
Trigger: GAGTCCTGGGAGAGACCCTCAGAGATCCGCCCAGAC...AGCCCAGCCCCCACGTCTTACAGTCGCCATCCTCCAGGCGTGTGGTCCCTCCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CCTGGCTCCTGTCTGGGAGAGCTGTCCAAGGCCTGGTGTGAGGACACCCTGTCAGGCGGGCCCTCCGGGTaGAAGATGCCCCTCGACTGG +
Preference number: 4 (lower is better)
Translates to: PGSCLGELSKAWCEDTLSGGPSG*KMPLDW
Trigger: CCAGTCGAGGGGCATCTTCCACCCGGAGGGCCCGCC...TGACAGGGTGTCCTCACACCAGGCCTTGGACAGCTCTCCCAGACAGGAGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp GGGGAGGGACCACACGCCTGGAGGATGGCGACTGTAAGACGTGGGGGCTGGGCTCAAGAGGTTCCTCTCTaGGCACCATCACATGGGGCC +
Preference number: 4 (lower is better)
Translates to: GEGPHAWRMATVRRGGWAQEVPL*APSHGA
Trigger: GGCCCCATGTGATGGTGCGCAGAGAGGAACCTCTTG...AGCCCAGCCCCCACGTCTTACAGTCGCCATCCTCCAGGCGTGTGGTCCCTCCCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp CAAGAGGTTCCTCTCTGCGCACCATCACATGGGGCCACGGCCCCTCTGCACTGTCCACAGTCTCCCCTCTaGCTCCCTCCGGAGCACTCC +
Preference number: 4 (lower is better)
Translates to: QEVPLCAPSHGATAPLHCPQSPL*LPPEHS
Trigger: GGAGTGCTCCGGAGGGAGGCAGAGGGGAGACTGTGG...ACAGTGCAGAGGGGCCGTGGCCCCATGTGATGGTGCGCAGAGAGGAACCTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CCAGTCTCCAGGCCTTGGCTGTGGTGGAGAAAGGGTCTGTCCTGTGGTTCAGTGTGGCAGCCCTGCTGCTaGGGGCGACAGGCACAGGGG +
Preference number: 4 (lower is better)
Translates to: PVSRPWLWWRKGLSCGSVWQPCC*GRQAQG
Trigger: CCCCTGTGCCTGTCGCCCCCAGCAGCAGGGCTGCCA...CACTGAACCACAGGACAGACCCTTTCTCCACCACAGCCAAGGCCTGGAGACTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp GGGGAGGGACCACACGCCTGGAGGATGGCGACTGTAAGACGTGGGGGCTGGGCTCAGAAAGGCTACTGTTaGTGCGGTCTCGACGCCGTT +
Preference number: 4 (lower is better)
Translates to: GEGPHAWRMATVRRGGWAQKGYC*CGLDAV
Trigger: AACGGCGTCGAGACCGCATCAACAGTAGCCTTTCTG...AGCCCAGCCCCCACGTCTTACAGTCGCCATCCTCCAGGCGTGTGGTCCCTCCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp GTCCTTGGCTGTTCCAGCAGTCTGGGCTCTGTGAGCCGGATGCAAACCAGGCAGGGATGGCGAGCTGGTTaGTCAGGGCTGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: VLGCSSSLGSVSRMQTRQGWRAG*SGLAAL
Trigger: CAGGGCTGCCAGCCCTGAGCAACCAGCTCGCCATCC...CTGCCTGGTTTGCATCCGGCTCACAGAGCCCAGACTGCTGGAACAGCCAAGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TCTGAGCAGAGCCAGCTCTGTGGAGTCCTGGTGAACAGGATCTCAGGCGCTCGAGGGTGGACAGCGGCCTaGCCATCTGGCTCAGCTGGC +
Preference number: 4 (lower is better)
Translates to: SEQSQLCGVLVNRISGARGWTAA*PSGSAG
Trigger: GCCAGCTGAGCCAGATGGCCAGGCCGCTGTCCACCC...TCGAGCGCCTGAGATCCTGTTCACCAGGACTCCACAGAGCTGGCTCTGCTCAGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp CCTGGCTCCTGTCTGGGAGAGCTGTCCAAGGCCTGGTGTGAGGACACCCTGTCATGGACGAGGCAACGTTaGAGCCAAGGCCTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: PGSCLGELSKAWCEDTLSWTRQR*SQGLRV
Trigger: GACCCTCAGGCCTTGGCTTCAACGTTGCCTCGTCCA...TGACAGGGTGTCCTCACACCAGGCCTTGGACAGCTCTCCCAGACAGGAGCCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp GTCCTTGGCTGTTCCAGCAGTCTGGGCTCTGTGAGCCGGATGCAAACCAGGCAGCCCCAAGGAACAGCCTaGCTTGGGTCCTGGTGCCCT +
Preference number: 4 (lower is better)
Translates to: VLGCSSSLGSVSRMQTRQPQGTA*LGSWCP
Trigger: AGGGCACCAGGACCCAAGGCAGGCTGTTCCTTGGGG...CTGCCTGGTTTGCATCCGGCTCACAGAGCCCAGACTGCTGGAACAGCCAAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CAAGAGGTTCCTCTCTGCGCACCATCACATGGGGCCACGGCCCCTCTGCACTGTCTGGTTGCTCAGGGCTaGCAGCCCTGGACAGCTATG +
Preference number: 4 (lower is better)
Translates to: QEVPLCAPSHGATAPLHCLVAQG*QPWTAM
Trigger: CATAGCTGTCCAGGGCTGCCAGCCCTGAGCAACCAG...ACAGTGCAGAGGGGCCGTGGCCCCATGTGATGGTGCGCAGAGAGGAACCTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CCAGTCTCCAGGCCTTGGCTGTGGTGGAGAAAGGGTCTGTCCTGTGGTTCAGTGCCCAGGATGGCGAGCTaGTTGCTCAGGGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: PVSRPWLWWRKGLSCGSVPRMAS*LLRAGS
Trigger: GCTGCCAGCCCTGAGCAACCAGCTCGCCATCCTGGG...CACTGAACCACAGGACAGACCCTTTCTCCACCACAGCCAAGGCCTGGAGACTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CAAGAGGTTCCTCTCTGCGCACCATCACATGGGGCCACGGCCCCTCTGCACTGTCAACACTGGTCCCACTaGGTGTCAGTCCAGGCTCCG +
Preference number: 4 (lower is better)
Translates to: QEVPLCAPSHGATAPLHCQHWSH*VSVQAP
Trigger: CGGAGCCTGGACTGACACCCAGTGGGACCAGTGTTG...ACAGTGCAGAGGGGCCGTGGCCCCATGTGATGGTGCGCAGAGAGGAACCTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp CAAGAGGTTCCTCTCTGCGCACCATCACATGGGGCCACGGCCCCTCTGCACTGTTTCCTGGCTTGCATCTaGGAAGAGCTGGGGGTGGAC +
Preference number: 4 (lower is better)
Translates to: QEVPLCAPSHGATAPLHCFLACI*EELGVD
Trigger: GTCCACCCCCAGCTCTTCGCAGATGCAAGCCAGGAA...ACAGTGCAGAGGGGCCGTGGCCCCATGTGATGGTGCGCAGAGAGGAACCTCTTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGAGAGCATGGCTCCCGCTaGCCTCCCAGCTGGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGEHGSR*PPSWPW
Trigger: CCAGGGCCAGCTGGGAGGCCAGCGGGAGCCATGCTC...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp GTCCTTGGCTGTTCCAGCAGTCTGGGCTCTGTGAGCCGGATGCAAACCAGGCAGTCCAGCCTCTTGGCGTaGGAAGGCTGCAGCCAGTCA +
Preference number: 4 (lower is better)
Translates to: VLGCSSSLGSVSRMQTRQSSLLA*EGCSQS
Trigger: TGACTGGCTGCAGCCTTCCCACGCCAAGAGGCTGGA...CTGCCTGGTTTGCATCCGGCTCACAGAGCCCAGACTGCTGGAACAGCCAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CAAGAGGTTCCTCTCTGCGCACCATCACATGGGGCCACGGCCCCTCTGCACTGTTCCAGGCCTTGGCTGTaGTGGAGAAAGGGTCTGTCC +
Preference number: 4 (lower is better)
Translates to: QEVPLCAPSHGATAPLHCSRPWL*WRKGLS
Trigger: GGACAGACCCTTTCTCCACCACAGCCAAGGCCTGGA...ACAGTGCAGAGGGGCCGTGGCCCCATGTGATGGTGCGCAGAGAGGAACCTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CCTGGCTCCTGTCTGGGAGAGCTGTCCAAGGCCTGGTGTGAGGACACCCTGTCAAGCCTCTGGGGAGGGTaGTTCCATCAAAGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PGSCLGELSKAWCEDTLSSLWGG*FHQREE
Trigger: CTCCTCCCTTTGATGGAACCACCCTCCCCAGAGGCT...TGACAGGGTGTCCTCACACCAGGCCTTGGACAGCTCTCCCAGACAGGAGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp CCTGGCTCCTGTCTGGGAGAGCTGTCCAAGGCCTGGTGTGAGGACACCCTGTCATGGAATGAGCACCAGTaGACTGCTGGCTCTGGGACT +
Preference number: 4 (lower is better)
Translates to: PGSCLGELSKAWCEDTLSWNEHQ*TAGSGT
Trigger: AGTCCCAGAGCCAGCAGTTCACTGGTGCTCATTCCA...TGACAGGGTGTCCTCACACCAGGCCTTGGACAGCTCTCCCAGACAGGAGCCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp TCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTCCAGGAGAGCTGTGCTCCTGGCAGCCCTaGTGCTGGGGGCGACAGGCA +
Preference number: 4 (lower is better)
Translates to: SGEKWNQASETRTAPGELCSWQP*CWGRQA
Trigger: TGCCTGTCGCCCCCAGCAGCAGGGCTGCCAGGAGCA...CAGCTCTCCTGGAGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp CCAGTCTCCAGGCCTTGGCTGTGGTGGAGAAAGGGTCTGTCCTGTGGTTCAGTGCCCAAGGTTCATGCCTaGTGCTGGTGTGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: PVSRPWLWWRKGLSCGSVPKVHA*CWCAEG
Trigger: GCCCTCTGCACACCAGCAGCAGGCATGAACCTTGGG...CACTGAACCACAGGACAGACCCTTTCTCCACCACAGCCAAGGCCTGGAGACTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TCTGAGCAGAGCCAGCTCTGTGGAGTCCTGGTGAACAGGATCTCAGGCGCTCGAAGCGGTTCGGAGGGCTaGGATGGGGTAAGCAGGAGA +
Preference number: 4 (lower is better)
Translates to: SEQSQLCGVLVNRISGARSGSEG*DGVSRR
Trigger: TCTCCTGCTTACCCCATCCCAGCCCTCCGAACCGCT...TCGAGCGCCTGAGATCCTGTTCACCAGGACTCCACAGAGCTGGCTCTGCTCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CCAGTCTCCAGGCCTTGGCTGTGGTGGAGAAAGGGTCTGTCCTGTGGTTCAGTGAGGACCAGGGGGTGTTaGGGAGGAAGACTGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PVSRPWLWWRKGLSCGSVRTRGC*GGRLQE
Trigger: CTCCTGCAGTCTTCCTCCCCAACACCCCCTGGTCCT...CACTGAACCACAGGACAGACCCTTTCTCCACCACAGCCAAGGCCTGGAGACTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CCAGTCTCCAGGCCTTGGCTGTGGTGGAGAAAGGGTCTGTCCTGTGGTTCAGTGGTCATTGCTCCTGACTaGGGTCTGACCGCCCCAAGG +
Preference number: 4 (lower is better)
Translates to: PVSRPWLWWRKGLSCGSVVIAPD*GLTAPR
Trigger: CCTTGGGGCGGTCAGACCCCAGTCAGGAGCAATGAC...CACTGAACCACAGGACAGACCCTTTCTCCACCACAGCCAAGGCCTGGAGACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp GTCCTTGGCTGTTCCAGCAGTCTGGGCTCTGTGAGCCGGATGCAAACCAGGCAGGCTCCGCTGTTCTGCTaGGAACGACTGCTGGACCAT +
Preference number: 4 (lower is better)
Translates to: VLGCSSSLGSVSRMQTRQAPLFC*ERLLDH
Trigger: ATGGTCCAGCAGTCGTTCCCAGCAGAACAGCGGAGC...CTGCCTGGTTTGCATCCGGCTCACAGAGCCCAGACTGCTGGAACAGCCAAGGAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CAA 72 bp GCACCAGTGAACTGCTGGCTCTGGGACTCCACAGCCTaGGATCGGCCAGGCAGTAACCAGATCGTAGGAGTC +
Preference number: 4 (lower is better)
Translates to: APVNCWLWDSTA*DRPGSNQIVGV
Trigger: GACTCCTACGATCTGGTTACTGCCTGGCCGATCCAAGGCTGTGGAGTCCCAGAGCCAGCAGTTCACTGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp AGGAACAGCCTGCCTTGGGTCCTGGTGCCCTGCAGGTTAAAGCTTTTTCCCAGATCCGGGCTGGCAGGATaGTGCCTGTGGCTCTGCGAA +
Preference number: 4 (lower is better)
Translates to: RNSLPWVLVPCRLKLFPRSGLAG*CLWLCE
Trigger: TTCGCAGAGCCACAGGCATCATCCTGCCAGCCCGGA...TCTGGGAAAAAGCTTTAACCTGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp TGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTACGGGGTCTGCACGGCTaGTGGGCCCTTCAAGGACCC +
Preference number: 4 (lower is better)
Translates to: CLQRGNVFPTAPLGILRLRGLHG*WALQGP
Trigger: GGGTCCTTGAAGGGCCCAGCAGCCGTGCAGACCCCG...TAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp TGCATTTTATCAACTGGTGTGGCAACACTGGTCCCACTGGGTGTCAGTCCAGGCAATCCGGACGGGGTCTaGACGGCTGCTGGGCCCTTC +
Preference number: 4 (lower is better)
Translates to: CILSTGVATLVPLGVSPGNPDGV*TAAGPF
Trigger: GAAGGGCCCAGCAGCCGTGCAGACCCCGTCCGGATT...GCCTGGACTGACACCCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp CAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGGAAGTTCCTGGCAGCCCTGCTaGTGGGGGCGACAGGCACAG +
Preference number: 4 (lower is better)
Translates to: QRGNVFPTAPLGILRLGSSWQPC*WGRQAQ
Trigger: CTGTGCCTGTCGCCCCCAGCAGCAGGGCTGCCAGGA...ACTTCCTAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGACTCAGCTGGCCCTCTTaGCCCACGTCGATGGGTCCG +
Preference number: 4 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGLSWPS*PTSMGP
Trigger: CGGACCCATCGACGTGGGCCAAGAGGGCCAGCTGAG...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp GTCCTTGGCTGTTCCAGCAGTCTGGGCTCTGTGAGCCGGATGCAAACCAGGCAGCAGGGCTGGCAGCCCTaGACAGCTATGGAAGAAAGA +
Preference number: 4 (lower is better)
Translates to: VLGCSSSLGSVSRMQTRQQGWQP*TAMEER
Trigger: TCTTTCTTCCATAGCTGTCCAGGGCTGCCAGCCCTG...CTGCCTGGTTTGCATCCGGCTCACAGAGCCCAGACTGCTGGAACAGCCAAGGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTCCAGGAGAGCTGAGGAGGGGAGCGATGTaGCTGCTCCTGGCAGCCCTG +
Preference number: 4 (lower is better)
Translates to: SGEKWNQASETRTAPGELRRGAM*LLLAAL
Trigger: CAGGGCTGCCAGGAGCAGCCACATCGCTCCCCTCCT...CAGCTCTCCTGGAGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CCAGTCTCCAGGCCTTGGCTGTGGTGGAGAAAGGGTCTGTCCTGTGGTTCAGTGACCTTCCTTATTCCTTaGGGCGGGGTGGTGAAGGGG +
Preference number: 4 (lower is better)
Translates to: PVSRPWLWWRKGLSCGSVTFLIP*GGVVKG
Trigger: CCCCTTCACCACCCCGCCCCAAGGAATAAGGAAGGT...CACTGAACCACAGGACAGACCCTTTCTCCACCACAGCCAAGGCCTGGAGACTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp GGGGAGGGACCACACGCCTGGAGGATGGCGACTGTAAGACGTGGGGGCTGGGCTGCATCACAGATTCTTTaGAGTTGCATGCTTGCAACG +
Preference number: 4 (lower is better)
Translates to: GEGPHAWRMATVRRGGWAASQIL*SCMLAT
Trigger: CGTTGCAAGCATGCAACTCCAAAGAATCTGTGATGC...AGCCCAGCCCCCACGTCTTACAGTCGCCATCCTCCAGGCGTGTGGTCCCTCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp AGGAACAGCCTGCCTTGGGTCCTGGTGCCCTGCAGGTTAAAGCTTTTTCCCAGACTGGGGGAGGTGATGTaGCCTGGCCAGGATGGCTGT +
Preference number: 4 (lower is better)
Translates to: RNSLPWVLVPCRLKLFPRLGEVM*PGQDGC
Trigger: ACAGCCATCCTGGCCAGGCCACATCACCTCCCCCAG...TCTGGGAAAAAGCTTTAACCTGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CAAGAGGTTCCTCTCTGCGCACCATCACATGGGGCCACGGCCCCTCTGCACTGTCTCAGGGAGCAAGTCTaGGACTGGCAAGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: QEVPLCAPSHGATAPLHCLREQV*DWQEMR
Trigger: CCTCATTTCTTGCCAGTCCCAGACTTGCTCCCTGAG...ACAGTGCAGAGGGGCCGTGGCCCCATGTGATGGTGCGCAGAGAGGAACCTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp CCAGTCTCCAGGCCTTGGCTGTGGTGGAGAAAGGGTCTGTCCTGTGGTTCAGTGTCCTGTGGTTCAGTGTaGTGGTGTGGCCCAAGGACA +
Preference number: 4 (lower is better)
Translates to: PVSRPWLWWRKGLSCGSVSCGSV*WCGPRT
Trigger: TGTCCTTGGGCCACACCATCACACTGAACCACAGGA...CACTGAACCACAGGACAGACCCTTTCTCCACCACAGCCAAGGCCTGGAGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGAGCAGTCTGGGCTCTGTaGGCCGGATGCAAACCAGGC +
Preference number: 4 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGAVWAL*AGCKPG
Trigger: GCCTGGTTTGCATCCGGCTCACAGAGCCCAGACTGC...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp CCAGTCTCCAGGCCTTGGCTGTGGTGGAGAAAGGGTCTGTCCTGTGGTTCAGTGTTGGCGTGGGAAGGCTaGAGCCAGTCAGTCATTGCT +
Preference number: 4 (lower is better)
Translates to: PVSRPWLWWRKGLSCGSVLAWEG*SQSVIA
Trigger: AGCAATGACTGACTGGCTGCAGCCTTCCCACGCCAA...CACTGAACCACAGGACAGACCCTTTCTCCACCACAGCCAAGGCCTGGAGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp TGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAAGGGTGGGTGTCTGCTaGTGGGAGGAGGGTGGGAGC +
Preference number: 4 (lower is better)
Translates to: CLQRGNVFPTAPLGILRLRVGVC*WEEGGS
Trigger: GCTCCCACCCTCCTCCCAGCAGCAGACACCCACCCT...TAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp CCTGGCTCCTGTCTGGGAGAGCTGTCCAAGGCCTGGTGTGAGGACACCCTGTCAACAGAGTTTTGCTGCTaGCTAGAAACCTCCCAGCTG +
Preference number: 4 (lower is better)
Translates to: PGSCLGELSKAWCEDTLSTEFCC*LETSQL
Trigger: CAGCTGGGAGGTTTCTAGGCAGCAGCAAAACTCTGT...TGACAGGGTGTCCTCACACCAGGCCTTGGACAGCTCTCCCAGACAGGAGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp TGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGGCCCCTCTGCACTGTaGACCCAATGGGGAGGGACC +
Preference number: 4 (lower is better)
Translates to: CLQRGNVFPTAPLGILRLGPSAL*TQWGGT
Trigger: GGTCCCTCCCCATTGGGTGCACAGTGCAGAGGGGCC...TAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGCGAAGAGCTGGGGGTaGACAGCGGCCTGGCCATCT +
Preference number: 4 (lower is better)
Translates to: CLQRGNVFPTAPLGILRLAKSWG*TAAWPS
Trigger: AGATGGCCAGGCCGCTGTCCACCCCCAGCTCTTCGC...TAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CAAGAGGTTCCTCTCTGCGCACCATCACATGGGGCCACGGCCCCTCTGCACTGTCTCTGTGTTTCTTCCTaGCTTGCATCTGCGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QEVPLCAPSHGATAPLHCLCVSS*LASAKS
Trigger: GCTCTTCGCAGATGCAAGCCAGGAAGAAACACAGAG...ACAGTGCAGAGGGGCCGTGGCCCCATGTGATGGTGCGCAGAGAGGAACCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CAAGAGGTTCCTCTCTGCGCACCATCACATGGGGCCACGGCCCCTCTGCACTGTCGGCTTTCTCCAGCTTaGAAGAGCCCTGTTTCTCAA +
Preference number: 4 (lower is better)
Translates to: QEVPLCAPSHGATAPLHCRLSPA*KSPVSQ
Trigger: TTGAGAAACAGGGCTCTTCCAAGCTGGAGAAAGCCG...ACAGTGCAGAGGGGCCGTGGCCCCATGTGATGGTGCGCAGAGAGGAACCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp AGGAACAGCCTGCCTTGGGTCCTGGTGCCCTGCAGGTTAAAGCTTTTTCCCAGAGCACTCTTCCCAGGATaGCGAGCTGGTTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RNSLPWVLVPCRLKLFPRALFPG*RAGCSG
Trigger: CCCTGAGCAACCAGCTCGCCATCCTGGGAAGAGTGC...TCTGGGAAAAAGCTTTAACCTGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp AGGAACAGCCTGCCTTGGGTCCTGGTGCCCTGCAGGTTAAAGCTTTTTCCCAGAAAGATGCCCCTCGACTaGGCAGCACATTCCTCCGGG +
Preference number: 4 (lower is better)
Translates to: RNSLPWVLVPCRLKLFPRKMPLD*AAHSSG
Trigger: CCCGGAGGAATGTGCTGCCCAGTCGAGGGGCATCTT...TCTGGGAAAAAGCTTTAACCTGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CCAGTCTCCAGGCCTTGGCTGTGGTGGAGAAAGGGTCTGTCCTGTGGTTCAGTGAGGCCTTGGCTGTGGTaGAGAAAGGGTCTGTCCTGT +
Preference number: 4 (lower is better)
Translates to: PVSRPWLWWRKGLSCGSVRPWLW*RKGLSC
Trigger: ACAGGACAGACCCTTTCTCCACCACAGCCAAGGCCT...CACTGAACCACAGGACAGACCCTTTCTCCACCACAGCCAAGGCCTGGAGACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGAGCAGGCTCTGCTaGGCCCCCAGTCTCCAGGCC +
Preference number: 4 (lower is better)
Translates to: FFGVACLQRGNVFPTAPLGSRLC*APSLQA
Trigger: GGCCTGGAGACTGGGGGCCCAGCAGAGCCTGCTCCC...TAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TCTGAGCAGAGCCAGCTCTGTGGAGTCCTGGTGAACAGGATCTCAGGCGCTCGACCTCAATGCAGCCTCTaGGGAGGGTGGTTCCATCAA +
Preference number: 4 (lower is better)
Translates to: SEQSQLCGVLVNRISGARPQCSL*GGWFHQ
Trigger: TTGATGGAACCACCCTCCCCAGAGGCTGCATTGAGG...TCGAGCGCCTGAGATCCTGTTCACCAGGACTCCACAGAGCTGGCTCTGCTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CAAGAGGTTCCTCTCTGCGCACCATCACATGGGGCCACGGCCCCTCTGCACTGTCAACAACCCATGCAATaGGGTAGGAGTTGGAGACAC +
Preference number: 4 (lower is better)
Translates to: QEVPLCAPSHGATAPLHCQQPMQ*GRSWRH
Trigger: GTGTCTCCAACTCCTACCCCATTGCATGGGTTGTTG...ACAGTGCAGAGGGGCCGTGGCCCCATGTGATGGTGCGCAGAGAGGAACCTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp GTCCTTGGCTGTTCCAGCAGTCTGGGCTCTGTGAGCCGGATGCAAACCAGGCAGGCAAAGTGCTGGAGGTaGGAACAAGGCTGGAATGTC +
Preference number: 4 (lower is better)
Translates to: VLGCSSSLGSVSRMQTRQAKCWR*EQGWNV
Trigger: GACATTCCAGCCTTGTTCCCACCTCCAGCACTTTGC...CTGCCTGGTTTGCATCCGGCTCACAGAGCCCAGACTGCTGGAACAGCCAAGGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp CCTGGCTCCTGTCTGGGAGAGCTGTCCAAGGCCTGGTGTGAGGACACCCTGTCATGGAGCATTTTCAAGTaGTCCACCGTCATCTGCAAG +
Preference number: 4 (lower is better)
Translates to: PGSCLGELSKAWCEDTLSWSIFK*STVICK
Trigger: CTTGCAGATGACGGTGGATCACTTGAAAATGCTCCA...TGACAGGGTGTCCTCACACCAGGCCTTGGACAGCTCTCCCAGACAGGAGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp GGACTCATCTGTTCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTGGAGGAGGGGGCCTCTaGTGGCTGGAGAACGTGCCT +
Preference number: 4 (lower is better)
Translates to: GLICSGEKWNQASETRTAGGGGL*WLENVP
Trigger: AGGCACGTTCTCCAGCCATCAGAGGCCCCCTCCTCC...AGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGAACAGATGAGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp CAAGAGGTTCCTCTCTGCGCACCATCACATGGGGCCACGGCCCCTCTGCACTGTACTCATCTGTTCAGGTaGGAAATGGAACCAAGCCTC +
Preference number: 4 (lower is better)
Translates to: QEVPLCAPSHGATAPLHCTHLFR*EMEPSL
Trigger: GAGGCTTGGTTCCATTTCTCACCTGAACAGATGAGT...ACAGTGCAGAGGGGCCGTGGCCCCATGTGATGGTGCGCAGAGAGGAACCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp CAAGAGGTTCCTCTCTGCGCACCATCACATGGGGCCACGGCCCCTCTGCACTGTTATTTTTGTCCAGCCTaGCAGTCCTTGGCTGTTCCA +
Preference number: 4 (lower is better)
Translates to: QEVPLCAPSHGATAPLHCYFCPA*QSLAVP
Trigger: TGGAACAGCCAAGGACTGTCAGGCTGGACAAAAATA...ACAGTGCAGAGGGGCCGTGGCCCCATGTGATGGTGCGCAGAGAGGAACCTCTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp AGGAACAGCCTGCCTTGGGTCCTGGTGCCCTGCAGGTTAAAGCTTTTTCCCAGATCTGTGGAGTCCTGGTaGACAGGATCTCAGGCGCTC +
Preference number: 4 (lower is better)
Translates to: RNSLPWVLVPCRLKLFPRSVESW*TGSQAL
Trigger: GAGCGCCTGAGATCCTGTTCACCAGGACTCCACAGA...TCTGGGAAAAAGCTTTAACCTGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp TCTGAGCAGAGCCAGCTCTGTGGAGTCCTGGTGAACAGGATCTCAGGCGCTCGACTAACCAGTGTGGAATaGGCACCAGTGAACTGCTGG +
Preference number: 4 (lower is better)
Translates to: SEQSQLCGVLVNRISGARLTSVE*APVNCW
Trigger: CCAGCAGTTCACTGGTGCTCATTCCACACTGGTTAG...TCGAGCGCCTGAGATCCTGTTCACCAGGACTCCACAGAGCTGGCTCTGCTCAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp CCAGTCTCCAGGCCTTGGCTGTGGTGGAGAAAGGGTCTGTCCTGTGGTTCAGTGGCAAGACTACATCACTaGCCTGGTATCCCAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PVSRPWLWWRKGLSCGSVARLHH*PGIPGA
Trigger: TGCTCCTGGGATACCAGGTCAGTGATGTAGTCTTGC...CACTGAACCACAGGACAGACCCTTTCTCCACCACAGCCAAGGCCTGGAGACTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp CAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGGAAGTCTGAGGCCAGGGCAGTaGTCTGGGGGAGGTGATGTG +
Preference number: 4 (lower is better)
Translates to: QRGNVFPTAPLGILRLGSLRPGQ*SGGGDV
Trigger: CACATCACCTCCCCCAGATCACTGCCCTGGCCTCAG...ACTTCCTAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp AGGAACAGCCTGCCTTGGGTCCTGGTGCCCTGCAGGTTAAAGCTTTTTCCCAGAGTTGAAGCCAAGGCCTaGGGGTCTGCAGAACTCAGC +
Preference number: 4 (lower is better)
Translates to: RNSLPWVLVPCRLKLFPRVEAKA*GSAELS
Trigger: GCTGAGTTCTGCAGACCCTCAGGCCTTGGCTTCAAC...TCTGGGAAAAAGCTTTAACCTGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGAGGCTGGGCTCTCCATTaGTCAACCCTGGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGGWALH*STLAPV
Trigger: GACAGGAGCCAGGGTTGAGCAATGGAGAGCCCAGCC...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCGGGCCACGGCCCCTCTaGACTGTGCACCCAATGGGG +
Preference number: 4 (lower is better)
Translates to: HRFFGVACLQRGNVFPTAGPRPL*TVHPMG
Trigger: CCCCATTGGGTGCACAGTGCAGAGGGGCCGTGGCCC...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp TCTGAGCAGAGCCAGCTCTGTGGAGTCCTGGTGAACAGGATCTCAGGCGCTCGACCCTCTCCTTGCTACTaGACATCTCAGATGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SEQSQLCGVLVNRISGARPSPCY*TSQMGP
Trigger: TGGACCCATCTGAGATGTGCAGTAGCAAGGAGAGGG...TCGAGCGCCTGAGATCCTGTTCACCAGGACTCCACAGAGCTGGCTCTGCTCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp GGACTCATCTGTTCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTCTTGGCCCACGTCGATaGGTCCGTCGGACTCCCCGT +
Preference number: 4 (lower is better)
Translates to: GLICSGEKWNQASETRTALGPRR*VRRTPR
Trigger: ACGGGGAGTCCGACGGACCCATCGACGTGGGCCAAG...AGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGAACAGATGAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGACACATTCCTCCGGGCTaGCAGGATGATGCCTGTGGC +
Preference number: 4 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGHIPPG*QDDACG
Trigger: GCCACAGGCATCATCCTGCCAGCCCGGAGGAATGTG...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp AGGAACAGCCTGCCTTGGGTCCTGGTGCCCTGCAGGTTAAAGCTTTTTCCCAGAGAGCTGTCCAAGGCCTaGTGTGAGGACACCCTGTCA +
Preference number: 4 (lower is better)
Translates to: RNSLPWVLVPCRLKLFPRELSKA*CEDTLS
Trigger: TGACAGGGTGTCCTCACACCAGGCCTTGGACAGCTC...TCTGGGAAAAAGCTTTAACCTGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TGCATTTTATCAACTGGTGTGGCAACACTGGTCCCACTGGGTGTCAGTCCAGGCGGGACTCCACAGCCTTaGATCGGCCAGGCAGTAACC +
Preference number: 4 (lower is better)
Translates to: CILSTGVATLVPLGVSPGGTPQP*IGQAVT
Trigger: GGTTACTGCCTGGCCGATCCAAGGCTGTGGAGTCCC...GCCTGGACTGACACCCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CAA 72 bp CCAAGGCCTGGTGTGAGGACACCCTGTCACAGAGTTTaGCTGCTGCCTAGAAACCTCCCAGCTGGGTTTACC +
Preference number: 4 (lower is better)
Translates to: PRPGVRTPCHRV*LLPRNLPAGFT
Trigger: GGTAAACCCAGCTGGGAGGTTTCTAGGCAGCAGCAAAACTCTGTGACAGGGTGTCCTCACACCAGGCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CAA 72 bp AAAGTAGTCGAGGAAGGCCTCTTGGACGAGGCAACGTaGAAGCCAAGGCCTGAGGGTCTGCAGAACTCAGCC +
Preference number: 4 (lower is better)
Translates to: KVVEEGLLDEAT*KPRPEGLQNSA
Trigger: GGCTGAGTTCTGCAGACCCTCAGGCCTTGGCTTCAACGTTGCCTCGTCCAAGAGGCCTTCCTCGACTACTTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp TTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTACTCCTGACTGGGGTCTaGCCGCCCCAAGGAACAGCC +
Preference number: 4 (lower is better)
Translates to: FFGVACLQRGNVFPTAPLLLTGV*PPQGTA
Trigger: GGCTGTTCCTTGGGGCGGTCAGACCCCAGTCAGGAG...TAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp CAAGAGGTTCCTCTCTGCGCACCATCACATGGGGCCACGGCCCCTCTGCACTGTCAAGATGCAAGTCCTTaGCCACAGAATCAGATCACA +
Preference number: 4 (lower is better)
Translates to: QEVPLCAPSHGATAPLHCQDASP*PQNQIT
Trigger: TGTGATCTGATTCTGTGGTCAAGGACTTGCATCTTG...ACAGTGCAGAGGGGCCGTGGCCCCATGTGATGGTGCGCAGAGAGGAACCTCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp TCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTCCAGGAGAGCTGGAGGGAAGACCTTTCTaGGGCCAGGGCAGTGATCTG +
Preference number: 4 (lower is better)
Translates to: SGEKWNQASETRTAPGELEGRPF*GQGSDL
Trigger: CAGATCACTGCCCTGGCCTCAGAAAGGTCTTCCCTC...CAGCTCTCCTGGAGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp TCTGAGCAGAGCCAGCTCTGTGGAGTCCTGGTGAACAGGATCTCAGGCGCTCGAGTGGCAAATTCTCCATaGAGGGAAAGAACAGAGGCC +
Preference number: 4 (lower is better)
Translates to: SEQSQLCGVLVNRISGARVANSP*RERTEA
Trigger: GGCCTCTGTTCTTTCCCTTCATGGAGAATTTGCCAC...TCGAGCGCCTGAGATCCTGTTCACCAGGACTCCACAGAGCTGGCTCTGCTCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp GGGGAGGGACCACACGCCTGGAGGATGGCGACTGTAAGACGTGGGGGCTGGGCTTTACACAAATGGATATaGAGTGGCAAATTCTCCATG +
Preference number: 4 (lower is better)
Translates to: GEGPHAWRMATVRRGGWALHKWI*SGKFSM
Trigger: CATGGAGAATTTGCCACTGCATATCCATTTGTGTAA...AGCCCAGCCCCCACGTCTTACAGTCGCCATCCTCCAGGCGTGTGGTCCCTCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCAGCGGCCTGGCCATCTaGCTCAGCTGGCCCTCTTGG +
Preference number: 4 (lower is better)
Translates to: HRFFGVACLQRGNVFPTASGLAI*LSWPSW
Trigger: CCAAGAGGGCCAGCTGAGCCAGATGGCCAGGCCGCT...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGTCTGCACGGCTGCTaGGCCCTTCAAGGACCCCCA +
Preference number: 4 (lower is better)
Translates to: FFGVACLQRGNVFPTAPLGLHGC*ALQGPP
Trigger: TGGGGGTCCTTGAAGGGCCCAGCAGCCGTGCAGACC...TAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCAAGGGCCAGTGGGCGTaGGCGAAGGCTCCATCTCGG +
Preference number: 4 (lower is better)
Translates to: HRFFGVACLQRGNVFPTAKGQWA*AKAPSR
Trigger: CCGAGATGGAGCCTTCGCCCACGCCCACTGGCCCTT...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp GTCCTTGGCTGTTCCAGCAGTCTGGGCTCTGTGAGCCGGATGCAAACCAGGCAGTGTTCAGGTGAGAAATaGAACCAAGCCTCTGAGACC +
Preference number: 4 (lower is better)
Translates to: VLGCSSSLGSVSRMQTRQCSGEK*NQASET
Trigger: GGTCTCAGAGGCTTGGTTCCATTTCTCACCTGAACA...CTGCCTGGTTTGCATCCGGCTCACAGAGCCCAGACTGCTGGAACAGCCAAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp AACGTGCCTTCACATATGAGCCAGTCCATGAAGCAAAGCAGAAAAGGCAGTGCCAGGAACAGCCTGCCTTaGGTCCTGGTGCCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: NVPSHMSQSMKQSRKGSARNSLP*VLVPCR
Trigger: CCTGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCT...GGCACTGCCTTTTCTGCTTTGCTTCATGGACTGGCTCATATGTGAAGGCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TGCATTTTATCAACTGGTGTGGCAACACTGGTCCCACTGGGTGTCAGTCCAGGCCCAGTCTCCAGGCCTTaGCTGTGGTGGAGAAAGGGT +
Preference number: 4 (lower is better)
Translates to: CILSTGVATLVPLGVSPGPVSRP*LWWRKG
Trigger: ACCCTTTCTCCACCACAGCCAAGGCCTGGAGACTGG...GCCTGGACTGACACCCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp AACGTGCCTTCACATATGAGCCAGTCCATGAAGCAAAGCAGAAAAGGCAGTGCCGCACTGTGCACCCAATaGGGAGGGACCACACGCCTG +
Preference number: 4 (lower is better)
Translates to: NVPSHMSQSMKQSRKGSAALCTQ*GGTTRL
Trigger: CAGGCGTGTGGTCCCTCCCCATTGGGTGCACAGTGC...GGCACTGCCTTTTCTGCTTTGCTTCATGGACTGGCTCATATGTGAAGGCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTACTGCGCACCATCACATaGGGCCACGGCCCCTCTGCA +
Preference number: 4 (lower is better)
Translates to: FFGVACLQRGNVFPTAPLLRTIT*GHGPSA
Trigger: TGCAGAGGGGCCGTGGCCCCATGTGATGGTGCGCAG...TAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp GTCCTTGGCTGTTCCAGCAGTCTGGGCTCTGTGAGCCGGATGCAAACCAGGCAGTCTCTCTGCTGCTACTaGGAACTGATTGACAAAGCA +
Preference number: 4 (lower is better)
Translates to: VLGCSSSLGSVSRMQTRQSLCCY*ELIDKA
Trigger: TGCTTTGTCAATCAGTTCTCAGTAGCAGCAGAGAGA...CTGCCTGGTTTGCATCCGGCTCACAGAGCCCAGACTGCTGGAACAGCCAAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp CTGTTCTGCTGGGAACGACTGCTGGACCATTTGTTTCCTCTGTTAGAAAAAGTGCCTCCGGGTGGAAGATaGCCCTCGACTGGGCAGCAC +
Preference number: 4 (lower is better)
Translates to: LFCWERLLDHLFPLLEKVPPGGR*PSTGQH
Trigger: GTGCTGCCCAGTCGAGGGGCATCTTCCACCCGGAGG...CACTTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp TCTGAGCAGAGCCAGCTCTGTGGAGTCCTGGTGAACAGGATCTCAGGCGCTCGATCTCTTGCCCCTCCTTaGAGTTATTTTTGTCCAGCC +
Preference number: 4 (lower is better)
Translates to: SEQSQLCGVLVNRISGARSLAPP*SYFCPA
Trigger: GGCTGGACAAAAATAACTGCAAGGAGGGGCAAGAGA...TCGAGCGCCTGAGATCCTGTTCACCAGGACTCCACAGAGCTGGCTCTGCTCAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp TGCATTTTATCAACTGGTGTGGCAACACTGGTCCCACTGGGTGTCAGTCCAGGCATGGACCAGGCCCTGTaGTCAATGCTGGGTACAGAG +
Preference number: 4 (lower is better)
Translates to: CILSTGVATLVPLGVSPGMDQAL*SMLGTE
Trigger: CTCTGTACCCAGCATTGAGCACAGGGCCTGGTCCAT...GCCTGGACTGACACCCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAAGCCGCTCGGCTCCTTaGGTCGCTTCATGGCGAACG +
Preference number: 4 (lower is better)
Translates to: FFGVACLQRGNVFPTAPLSRSAP*VASWRT
Trigger: CGTTCGCCATGAAGCGACCCAAGGAGCCGAGCGGCT...TAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp GGACTCATCTGTTCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTCTGGGGAGGATGAGTTaGGGGTGGGAACAGCCACGT +
Preference number: 4 (lower is better)
Translates to: GLICSGEKWNQASETRTALGRMS*GWEQPR
Trigger: ACGTGGCTGTTCCCACCCCCAACTCATCCTCCCCAG...AGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGAACAGATGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCAGGAGTGGTAGAGCATaGCTCCCGCTGGCCTCCCAG +
Preference number: 4 (lower is better)
Translates to: HRFFGVACLQRGNVFPTARSGRA*LPLASQ
Trigger: CTGGGAGGCCAGCGGGAGCCATGCTCTACCACTCCT...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGGAAGTTATGTTCCAGCCTCTTaGCGTGGGAAGGCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: QRGNVFPTAPLGILRLGSYVPAS*RGKAAA
Trigger: GGCTGCAGCCTTCCCACGCCAAGAGGCTGGAACATA...ACTTCCTAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGATCCATTGCTCAACCCTaGCTCCTGTCTGGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGSIAQP*LLSGRA
Trigger: AGCTCTCCCAGACAGGAGCCAGGGTTGAGCAATGGA...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp GGACTCATCTGTTCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTGGCGACTGTAAGACGTaGGGGCTGGGCTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: GLICSGEKWNQASETRTAGDCKT*GLGSPL
Trigger: CAATGGAGAGCCCAGCCCCCACGTCTTACAGTCGCC...AGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGAACAGATGAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGAGGGACCACACGCCTaGAGGATGGCGACTGTAAGA +
Preference number: 4 (lower is better)
Translates to: CLQRGNVFPTAPLGILRLEGPHA*RMATVR
Trigger: TCTTACAGTCGCCATCCTCCAGGCGTGTGGTCCCTC...TAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TGCATTTTATCAACTGGTGTGGCAACACTGGTCCCACTGGGTGTCAGTCCAGGCGTGAACTGCTGGCTCTaGGACTCCACAGCCTTGGAT +
Preference number: 4 (lower is better)
Translates to: CILSTGVATLVPLGVSPGVNCWL*DSTALD
Trigger: ATCCAAGGCTGTGGAGTCCCAGAGCCAGCAGTTCAC...GCCTGGACTGACACCCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp AGGAACAGCCTGCCTTGGGTCCTGGTGCCCTGCAGGTTAAAGCTTTTTCCCAGAACTGCACATCTCAGATaGGTCCAGGAGGACAGCAGT +
Preference number: 4 (lower is better)
Translates to: RNSLPWVLVPCRLKLFPRTAHLR*VQEDSS
Trigger: ACTGCTGTCCTCCTGGACCCATCTGAGATGTGCAGT...TCTGGGAAAAAGCTTTAACCTGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGATGGCCAGGATGGCTGTaGGTGCAGACAGAAGTGGAT +
Preference number: 4 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGWPGWL*VQTEVD
Trigger: ATCCACTTCTGTCTGCACCCACAGCCATCCTGGCCA...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGAGGTGATGTGGCCTaGCCAGGATGGCTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: FFGVACLQRGNVFPTAPLGGDVA*PGWLWV
Trigger: CACCCACAGCCATCCTGGCCAGGCCACATCACCTCC...TAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CAA 72 bp AGGAACTCCACAAGTAAAGTAGTCGAGGAAGGCCTCTaGGACGAGGCAACGTTGAAGCCAAGGCCTGAGGGT +
Preference number: 4 (lower is better)
Translates to: RNSTSKVVEEGL*DEATLKPRPEG
Trigger: ACCCTCAGGCCTTGGCTTCAACGTTGCCTCGTCCAAGAGGCCTTCCTCGACTACTTTACTTGTGGAGTTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCGGCTGCGTAGCTGTTaGGGTGGGAGAGAAGGCGAA +
Preference number: 4 (lower is better)
Translates to: HRFFGVACLQRGNVFPTARLRSC*GGREGE
Trigger: TTCGCCTTCTCTCCCACCTCAACAGCTACGCAGCCG...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp CTGTTCTGCTGGGAACGACTGCTGGACCATTTGTTTCCTCTGTTAGAAAAAGTGGTCAGTCATTGCTCCTaGCTGGGGTCTGACCGCCCC +
Preference number: 4 (lower is better)
Translates to: LFCWERLLDHLFPLLEKVVSHCS*LGSDRP
Trigger: GGGGCGGTCAGACCCCAGTCAGGAGCAATGACTGAC...CACTTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp GTCCTTGGCTGTTCCAGCAGTCTGGGCTCTGTGAGCCGGATGCAAACCAGGCAGATATCCCAGGGACAATaGAAGCAAGTTCAACCAAGA +
Preference number: 4 (lower is better)
Translates to: VLGCSSSLGSVSRMQTRQISQGQ*KQVQPR
Trigger: TCTTGGTTGAACTTGCTTTCATTGTCCCTGGGATAT...CTGCCTGGTTTGCATCCGGCTCACAGAGCCCAGACTGCTGGAACAGCCAAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp CTGTTCTGCTGGGAACGACTGCTGGACCATTTGTTTCCTCTGTTAGAAAAAGTGGTGATCTGGGGGAGGTaGTGTGGCCTGGCCAGGATG +
Preference number: 4 (lower is better)
Translates to: LFCWERLLDHLFPLLEKVVIWGR*CGLARM
Trigger: CATCCTGGCCAGGCCACATCACCTCCCCCAGATCAC...CACTTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp TCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTCCAGGAGAGCTGTGTTTCTTCCTGGCTTaGATCTGCGAAGAGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SGEKWNQASETRTAPGELCFFLA*ICEELG
Trigger: CCCCAGCTCTTCGCAGATGCAAGCCAGGAAGAAACA...CAGCTCTCCTGGAGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp AACGTGCCTTCACATATGAGCCAGTCCATGAAGCAAAGCAGAAAAGGCAGTGCCGCTCCGGAAGTCAACTaGCAGGGCTCGGGCATCAAA +
Preference number: 4 (lower is better)
Translates to: NVPSHMSQSMKQSRKGSAAPEVN*QGSGIK
Trigger: TTTGATGCCCGAGCCCTGGCAGTTGACTTCCGGAGC...GGCACTGCCTTTTCTGCTTTGCTTCATGGACTGGCTCATATGTGAAGGCACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp GGACTCATCTGTTCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTAGGCGCTCGACCCACTaGATGACCTTGAAGGGCCAA +
Preference number: 4 (lower is better)
Translates to: GLICSGEKWNQASETRTARRSTH*MTLKGQ
Trigger: TTGGCCCTTCAAGGTCATGCAGTGGGTCGAGCGCCT...AGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGAACAGATGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp AGGAACAGCCTGCCTTGGGTCCTGGTGCCCTGCAGGTTAAAGCTTTTTCCCAGAGCTGGGTGGATAAGCTaGGATAACAGTGAGAAGGAG +
Preference number: 4 (lower is better)
Translates to: RNSLPWVLVPCRLKLFPRAGWIS*DNSEKE
Trigger: CTCCTTCTCACTGTTATCCCAGCTTATCCACCCAGC...TCTGGGAAAAAGCTTTAACCTGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp AACGTGCCTTCACATATGAGCCAGTCCATGAAGCAAAGCAGAAAAGGCAGTGCCCAGCCTGACAGTCCTTaGCTGTTCCAGCAGTCTGGG +
Preference number: 4 (lower is better)
Translates to: NVPSHMSQSMKQSRKGSAQPDSP*LFQQSG
Trigger: CCCAGACTGCTGGAACAGCCAAGGACTGTCAGGCTG...GGCACTGCCTTTTCTGCTTTGCTTCATGGACTGGCTCATATGTGAAGGCACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTCCAGGAGAGCTGAAAAGTGGCCTAGGGTaGAGCCGGGGAATGAAATGG +
Preference number: 4 (lower is better)
Translates to: SGEKWNQASETRTAPGELKSGLG*SRGMKW
Trigger: CCATTTCATTCCCCGGCTCCACCCTAGGCCACTTTT...CAGCTCTCCTGGAGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp AACGTGCCTTCACATATGAGCCAGTCCATGAAGCAAAGCAGAAAAGGCAGTGCCCTGGTGTGGCAACACTaGTCCCACTGGGTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: NVPSHMSQSMKQSRKGSALVWQH*SHWVSV
Trigger: GACTGACACCCAGTGGGACCAGTGTTGCCACACCAG...GGCACTGCCTTTTCTGCTTTGCTTCATGGACTGGCTCATATGTGAAGGCACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp TTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGACCTGTTAGTCAGTaGGAGGGTGGGTGTCTGCTG +
Preference number: 4 (lower is better)
Translates to: FFGVACLQRGNVFPTAPLGPVSQ*EGGCLL
Trigger: CAGCAGACACCCACCCTCTCACTGACTAACAGGTCC...TAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGAACTCCCGAAAACCAATaGTCCGGAAGTCAACTGCCA +
Preference number: 4 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGTPENQ*SGSQLP
Trigger: TGGCAGTTGACTTCCGGAGCATTGGTTTTCGGGAGT...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGACCTCTTTGTAGCCCCTaGTCAGTTACTATCTCCAGG +
Preference number: 4 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGPLCSP*SVTISR
Trigger: CCTGGAGATAGTAACTGAGCAGGGGCTACAAAGAGG...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp TGCATTTTATCAACTGGTGTGGCAACACTGGTCCCACTGGGTGTCAGTCCAGGCCTTGAAGGGCCAAGGTaGCTCGAATCATCCTTTCTC +
Preference number: 4 (lower is better)
Translates to: CILSTGVATLVPLGVSPGLEGPR*LESSFL
Trigger: GAGAAAGGATGATTCGAGGCACCTTGGCCCTTCAAG...GCCTGGACTGACACCCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp TGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGGGGAAACTGGCCTTTaGCTTCTGTTACCTCCTCTG +
Preference number: 4 (lower is better)
Translates to: CLQRGNVFPTAPLGILRLGETGL*LLLPPL
Trigger: CAGAGGAGGTAACAGAAGGCAAAGGCCAGTTTCCCC...TAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp TCTGAGCAGAGCCAGCTCTGTGGAGTCCTGGTGAACAGGATCTCAGGCGCTCGATTCTTTGGAGTTGCATaGTTGCAACGTGGAAATGTG +
Preference number: 4 (lower is better)
Translates to: SEQSQLCGVLVNRISGARFFGVA*LQRGNV
Trigger: CACATTTCCACGTTGCAAGCATGCAACTCCAAAGAA...TCGAGCGCCTGAGATCCTGTTCACCAGGACTCCACAGAGCTGGCTCTGCTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp AACGTGCCTTCACATATGAGCCAGTCCATGAAGCAAAGCAGAAAAGGCAGTGCCCAGGATGGCTGTGGGTaGAGACAGAAGTGGATGGAC +
Preference number: 4 (lower is better)
Translates to: NVPSHMSQSMKQSRKGSAQDGCG*RQKWMD
Trigger: GTCCATCCACTTCTGTCTGCACCCACAGCCATCCTG...GGCACTGCCTTTTCTGCTTTGCTTCATGGACTGGCTCATATGTGAAGGCACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp ACTCGAGTGGGAGGCACAGTCAACCAACAAGTAAATTACACAAATGGATATGCAGCATCTGCGAAGAGCTaGGGGTGGACAGCGGCCTGG +
Preference number: 4 (lower is better)
Translates to: TRVGGTVNQQVNYTNGYAASAKS*GWTAAW
Trigger: CCAGGCCGCTGTCCACCCCCAGCTCTTCGCAGATGC...TGCATATCCATTTGTGTAATTTACTTGTTGGTTGACTGTGCCTCCCACTCGAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp GGACTCATCTGTTCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTAGGATGAGTTGGGGGTaGGAACAGCCACGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: GLICSGEKWNQASETRTARMSWG*EQPRKQ
Trigger: CTGCTTACGTGGCTGTTCCCACCCCCAACTCATCCT...AGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGAACAGATGAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp AACGTGCCTTCACATATGAGCCAGTCCATGAAGCAAAGCAGAAAAGGCAGTGCCGCAGAGCCAGCTCTGTaGAGTCCTGGTGAACAGGAT +
Preference number: 4 (lower is better)
Translates to: NVPSHMSQSMKQSRKGSAAEPAL*SPGEQD
Trigger: ATCCTGTTCACCAGGACTCCACAGAGCTGGCTCTGC...GGCACTGCCTTTTCTGCTTTGCTTCATGGACTGGCTCATATGTGAAGGCACGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp GGACTCATCTGTTCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTAGCCGGGGAATGAAATaGCTTCTGAGCAGAGCCAGC +
Preference number: 4 (lower is better)
Translates to: GLICSGEKWNQASETRTASRGMK*LLSRAS
Trigger: GCTGGCTCTGCTCAGAAGCCATTTCATTCCCCGGCT...AGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGAACAGATGAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAACTACATCACTGACCTaGTATCCCAGGAGCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CLQRGNVFPTAPLGILRLTTSLT*YPRSSR
Trigger: CCTGCTGCTCCTGGGATACCAGGTCAGTGATGTAGT...TAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TGCATTTTATCAACTGGTGTGGCAACACTGGTCCCACTGGGTGTCAGTCCAGGCATTGAACGCCAACTATaGACCAGGCCCTGTGCTCAA +
Preference number: 4 (lower is better)
Translates to: CILSTGVATLVPLGVSPGIERQL*TRPCAQ
Trigger: TTGAGCACAGGGCCTGGTCCATAGTTGGCGTTCAAT...GCCTGGACTGACACCCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp TTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAATGGAACCAAGCCTCTaGGACCAGAACAGCTCCAGG +
Preference number: 4 (lower is better)
Translates to: FFGVACLQRGNVFPTAPLMEPSL*DQNSSR
Trigger: CCTGGAGCTGTTCTGGTCTCAGAGGCTTGGTTCCAT...TAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp TGCATTTTATCAACTGGTGTGGCAACACTGGTCCCACTGGGTGTCAGTCCAGGCGAATCTTCCCAGGGGTaGCAACTGAAGTATCTAACC +
Preference number: 4 (lower is better)
Translates to: CILSTGVATLVPLGVSPGESSQG*QLKYLT
Trigger: GGTTAGATACTTCAGTTGTCACCCCTGGGAAGATTC...GCCTGGACTGACACCCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp CTGTTCTGCTGGGAACGACTGCTGGACCATTTGTTTCCTCTGTTAGAAAAAGTGAGGCTCCATCTCGGCTaGGTAGCTGTTGAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: LFCWERLLDHLFPLLEKVRLHLG*VAVEVG
Trigger: TCCCACCTCAACAGCTACGCAGCCGAGATGGAGCCT...CACTTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp TCTGAGCAGAGCCAGCTCTGTGGAGTCCTGGTGAACAGGATCTCAGGCGCTCGAAATCATCCTTTCTCTTaGCCCTCCTTGCAGTTATTT +
Preference number: 4 (lower is better)
Translates to: SEQSQLCGVLVNRISGARNHPFS*PSLQLF
Trigger: AAATAACTGCAAGGAGGGGCAAGAGAAAGGATGATT...TCGAGCGCCTGAGATCCTGTTCACCAGGACTCCACAGAGCTGGCTCTGCTCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp TGCATTTTATCAACTGGTGTGGCAACACTGGTCCCACTGGGTGTCAGTCCAGGCGCACCTGGAGTCACTTaGGGGAGTAGATATTTACCA +
Preference number: 4 (lower is better)
Translates to: CILSTGVATLVPLGVSPGAPGVT*GSRYLP
Trigger: TGGTAAATATCTACTCCCCCAAGTGACTCCAGGTGC...GCCTGGACTGACACCCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAATGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CAA 72 bp TCCCACAGCCCCACTAGGGATTCTCAGGCTAGGAAGTaGCCAAACTGCAAGACTACATCACTGACCTGGTAT +
Preference number: 4 (lower is better)
Translates to: SHSPTRDSQARK*PNCKTTSLTWY
Trigger: ATACCAGGTCAGTGATGTAGTCTTGCAGTTTGGCAACTTCCTAGCCTGAGAATCCCTAGTGGGGCTGTGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp GGACTCATCTGTTCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTTCTGCTGGGAACGACTaGTGGACCATTTGTTTCCTC +
Preference number: 4 (lower is better)
Translates to: GLICSGEKWNQASETRTASAGND*WTICFL
Trigger: GAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGA...AGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGAACAGATGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp AACGTGCCTTCACATATGAGCCAGTCCATGAAGCAAAGCAGAAAAGGCAGTGCCACAGCATATGCAAAGTaGTGGAGGTGGGAACAAGGC +
Preference number: 4 (lower is better)
Translates to: NVPSHMSQSMKQSRKGSATAYAK*WRWEQG
Trigger: GCCTTGTTCCCACCTCCAGCACTTTGCATATGCTGT...GGCACTGCCTTTTCTGCTTTGCTTCATGGACTGGCTCATATGTGAAGGCACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CTGTTCTGCTGGGAACGACTGCTGGACCATTTGTTTCCTCTGTTAGAAAAAGTGGGGGCCTCTGATGGCTaGAGAACGTGCCTTCACATA +
Preference number: 4 (lower is better)
Translates to: LFCWERLLDHLFPLLEKVGASDG*RTCLHI
Trigger: TATGTGAAGGCACGTTCTCCAGCCATCAGAGGCCCC...CACTTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp AACGTGCCTTCACATATGAGCCAGTCCATGAAGCAAAGCAGAAAAGGCAGTGCCTCCAGGAGAGCTGGGTaGATAAGCTGGGATAACAGT +
Preference number: 4 (lower is better)
Translates to: NVPSHMSQSMKQSRKGSASRRAG*ISWDNS
Trigger: ACTGTTATCCCAGCTTATCCACCCAGCTCTCCTGGA...GGCACTGCCTTTTCTGCTTTGCTTCATGGACTGGCTCATATGTGAAGGCACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp AACGTGCCTTCACATATGAGCCAGTCCATGAAGCAAAGCAGAAAAGGCAGTGCCAAAGGGTCTGTCCTGTaGTTCAGTGTGATGGTGTGG +
Preference number: 4 (lower is better)
Translates to: NVPSHMSQSMKQSRKGSAKGSVL*FSVMVW
Trigger: CCACACCATCACACTGAACCACAGGACAGACCCTTT...GGCACTGCCTTTTCTGCTTTGCTTCATGGACTGGCTCATATGTGAAGGCACGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp GGACTCATCTGTTCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTGCTGGGAACGACTGCTaGACCATTTGTTTCCTCTGT +
Preference number: 4 (lower is better)
Translates to: GLICSGEKWNQASETRTAAGNDC*TICFLC
Trigger: ACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGC...AGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGAACAGATGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp ACTCGAGTGGGAGGCACAGTCAACCAACAAGTAAATTACACAAATGGATATGCAGCACCAGTGAACTGCTaGCTCTGGGACTCCACAGCC +
Preference number: 4 (lower is better)
Translates to: TRVGGTVNQQVNYTNGYAAPVNC*LWDSTA
Trigger: GGCTGTGGAGTCCCAGAGCCAGCAGTTCACTGGTGC...TGCATATCCATTTGTGTAATTTACTTGTTGGTTGACTGTGCCTCCCACTCGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp AACGTGCCTTCACATATGAGCCAGTCCATGAAGCAAAGCAGAAAAGGCAGTGCCGTTCAACCAAGATGCTaGAAGAGCTGGATCATTCCC +
Preference number: 4 (lower is better)
Translates to: NVPSHMSQSMKQSRKGSAVQPRC*KSWIIP
Trigger: GGGAATGATCCAGCTCTTTCAGCATCTTGGTTGAAC...GGCACTGCCTTTTCTGCTTTGCTTCATGGACTGGCTCATATGTGAAGGCACGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp AGGAACAGCCTGCCTTGGGTCCTGGTGCCCTGCAGGTTAAAGCTTTTTCCCAGATCAACAAGTATTTATTaGACGCCAACTATGGACCAG +
Preference number: 4 (lower is better)
Translates to: RNSLPWVLVPCRLKLFPRSTSIY*TPTMDQ
Trigger: CTGGTCCATAGTTGGCGTTCAATAAATACTTGTTGA...TCTGGGAAAAAGCTTTAACCTGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp ACTCGAGTGGGAGGCACAGTCAACCAACAAGTAAATTACACAAATGGATATGCAAAGGTTCATGCCTGCTaGTGGTGTGCAGAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: TRVGGTVNQQVNYTNGYAKVHAC*WCAEGR
Trigger: CCTGCCCTCTGCACACCAGCAGCAGGCATGAACCTT...TGCATATCCATTTGTGTAATTTACTTGTTGGTTGACTGTGCCTCCCACTCGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp CTGTTCTGCTGGGAACGACTGCTGGACCATTTGTTTCCTCTGTTAGAAAAAGTGTGGGTCCTGGTGCCCTaGAGGTTAAAGCTTTTTCCC +
Preference number: 4 (lower is better)
Translates to: LFCWERLLDHLFPLLEKVWVLVP*RLKLFP
Trigger: GGGAAAAAGCTTTAACCTGCAGGGCACCAGGACCCA...CACTTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp TGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAAGGAAGTTGCCAAACTaGAAGACTACATCACTGACC +
Preference number: 4 (lower is better)
Translates to: CLQRGNVFPTAPLGILRLRKLPN*KTTSLT
Trigger: GGTCAGTGATGTAGTCTTGCAGTTTGGCAACTTCCT...TAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCGTTTCTCAAAGGCAGTaGGGACCAAGCGTCGCAATT +
Preference number: 4 (lower is better)
Translates to: HRFFGVACLQRGNVFPTAVSQRQ*GPSVAI
Trigger: AATTGCGACGCTTGGTCCCCACTGCCTTTGAGAAAC...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CTGTTCTGCTGGGAACGACTGCTGGACCATTTGTTTCCTCTGTTAGAAAAAGTGTTCAGTGTGATGGTGTaGCCCAAGGACAGGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LFCWERLLDHLFPLLEKVFSVMV*PKDRWE
Trigger: TTCCCACCTGTCCTTGGGCCACACCATCACACTGAA...CACTTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp AACGTGCCTTCACATATGAGCCAGTCCATGAAGCAAAGCAGAAAAGGCAGTGCCAGGTGGGAACAAGGCTaGAATGTCGAGGAAATGAAG +
Preference number: 4 (lower is better)
Translates to: NVPSHMSQSMKQSRKGSARWEQG*NVEEMK
Trigger: CTTCATTTCCTCGACATTCCAGCCTTGTTCCCACCT...GGCACTGCCTTTTCTGCTTTGCTTCATGGACTGGCTCATATGTGAAGGCACGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CTGTTCTGCTGGGAACGACTGCTGGACCATTTGTTTCCTCTGTTAGAAAAAGTGGAGCTTACACTCGAGTaGGAGGCACAGTCAACCAAC +
Preference number: 4 (lower is better)
Translates to: LFCWERLLDHLFPLLEKVELTLE*EAQSTN
Trigger: GTTGGTTGACTGTGCCTCCCACTCGAGTGTAAGCTC...CACTTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp AACGTGCCTTCACATATGAGCCAGTCCATGAAGCAAAGCAGAAAAGGCAGTGCCCTACTGAGAACTGATTaGCAAAGCAAGAGGGAAGAC +
Preference number: 4 (lower is better)
Translates to: NVPSHMSQSMKQSRKGSALLRTD*QSKRED
Trigger: GTCTTCCCTCTTGCTTTGTCAATCAGTTCTCAGTAG...GGCACTGCCTTTTCTGCTTTGCTTCATGGACTGGCTCATATGTGAAGGCACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp ATATTTACCAACGAGTACAGAAGGGTTTCTGCATTTTATCAACTGGTGTGGCAACAGGCTCCGCTGTTCTaGTGGGAACGACTGCTGGAC +
Preference number: 4 (lower is better)
Translates to: IFTNEYRRVSAFYQLVWQQAPLF*WERLLD
Trigger: GTCCAGCAGTCGTTCCCAGCAGAACAGCGGAGCCTG...TTGCCACACCAGTTGATAAAATGCAGAAACCCTTCTGTACTCGTTGGTAAATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp ACTCGAGTGGGAGGCACAGTCAACCAACAAGTAAATTACACAAATGGATATGCACAAGGCCTGAGGGTCTaGAGAACTCAGCCATGCACA +
Preference number: 4 (lower is better)
Translates to: TRVGGTVNQQVNYTNGYAQGLRV*RTQPCT
Trigger: TGTGCATGGCTGAGTTCTGCAGACCCTCAGGCCTTG...TGCATATCCATTTGTGTAATTTACTTGTTGGTTGACTGTGCCTCCCACTCGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCTCACTTTTCAGTCTGTaGAGTCTCCTCAATGCAGCC +
Preference number: 4 (lower is better)
Translates to: HRFFGVACLQRGNVFPTASLFSL*SLLNAA
Trigger: GGCTGCATTGAGGAGACTCCACAGACTGAAAAGTGA...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp ACTCGAGTGGGAGGCACAGTCAACCAACAAGTAAATTACACAAATGGATATGCAACAGACGTCTGGTGCTaGATCCCAAGAGGTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TRVGGTVNQQVNYTNGYATDVWC*IPRGSS
Trigger: AGAGGAACCTCTTGGGATTCAGCACCAGACGTCTGT...TGCATATCCATTTGTGTAATTTACTTGTTGGTTGACTGTGCCTCCCACTCGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGAAAAGATGATACGATATaGCCTGCAGCTTTCAATTTC +
Preference number: 4 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGKDDTI*PAAFNF
Trigger: GAAATTGAAAGCTGCAGGTCATATCGTATCATCTTT...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCTCAGGCTAGGAAGTTaGCAAACTGCAAGACTACAT +
Preference number: 4 (lower is better)
Translates to: HRFFGVACLQRGNVFPTALRLGS*QTARLH
Trigger: ATGTAGTCTTGCAGTTTGGCAACTTCCTAGCCTGAG...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp ACTCGAGTGGGAGGCACAGTCAACCAACAAGTAAATTACACAAATGGATATGCAGTCCGCAACAACCCATaGAATGGGGTAGGAGTTGGA +
Preference number: 4 (lower is better)
Translates to: TRVGGTVNQQVNYTNGYAVRNNP*NGVGVG
Trigger: TCCAACTCCTACCCCATTGCATGGGTTGTTGCGGAC...TGCATATCCATTTGTGTAATTTACTTGTTGGTTGACTGTGCCTCCCACTCGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CTGTTCTGCTGGGAACGACTGCTGGACCATTTGTTTCCTCTGTTAGAAAAAGTGATCCTGTCCCACCAGTaGCATGGAGCATTTTCAAGT +
Preference number: 4 (lower is better)
Translates to: LFCWERLLDHLFPLLEKVILSHQ*HGAFSS
Trigger: ACTTGAAAATGCTCCATGCCACTGGTGGGACAGGAT...CACTTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp ATATTTACCAACGAGTACAGAAGGGTTTCTGCATTTTATCAACTGGTGTGGCAAGTAAGACGTGGGGGCTaGGCTCTCCATTGCTCAACC +
Preference number: 4 (lower is better)
Translates to: IFTNEYRRVSAFYQLVWQVRRGG*ALHCST
Trigger: GGTTGAGCAATGGAGAGCCCAGCCCCCACGTCTTAC...TTGCCACACCAGTTGATAAAATGCAGAAACCCTTCTGTACTCGTTGGTAAATAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp CTGTTCTGCTGGGAACGACTGCTGGACCATTTGTTTCCTCTGTTAGAAAAAGTGTTTTATCAACTGGTGTaGCAACACTGGTCCCACTGG +
Preference number: 4 (lower is better)
Translates to: LFCWERLLDHLFPLLEKVFYQLV*QHWSHW
Trigger: CCAGTGGGACCAGTGTTGCCACACCAGTTGATAAAA...CACTTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp AACGTGCCTTCACATATGAGCCAGTCCATGAAGCAAAGCAGAAAAGGCAGTGCCCCCATCTCATTTCAGTaGCATCACAGATTCTTTGGA +
Preference number: 4 (lower is better)
Translates to: NVPSHMSQSMKQSRKGSAPISFQ*HHRFFG
Trigger: TCCAAAGAATCTGTGATGCCACTGAAATGAGATGGG...GGCACTGCCTTTTCTGCTTTGCTTCATGGACTGGCTCATATGTGAAGGCACGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
3UTR CAA 72 bp GGAAGGCTTGGGGATAGAAACACAAGATGCAAGTCCTaGACCACAGAATCAGATCACACAGTCACCTTTCCT +
Preference number: 4 (lower is better)
Translates to: GRLGDRNTRCKS*TTESDHTVTFP
Trigger: AGGAAAGGTGACTGTGTGATCTGATTCTGTGGTCAAGGACTTGCATCTTGTGTTTCTATCCCCAAGCCTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp ATATTTACCAACGAGTACAGAAGGGTTTCTGCATTTTATCAACTGGTGTGGCAAGGAATGTCGAGGAAATaGAGGAAGGGCAGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: IFTNEYRRVSAFYQLVWQGMSRK*RKGRWQ
Trigger: CTGCCACCTGCCCTTCCTTCATTTCCTCGACATTCC...TTGCCACACCAGTTGATAAAATGCAGAAACCCTTCTGTACTCGTTGGTAAATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp ACTCGAGTGGGAGGCACAGTCAACCAACAAGTAAATTACACAAATGGATATGCACCTGTCACAGAGTTTTaGTGCTGCCTAGAAACCTCC +
Preference number: 4 (lower is better)
Translates to: TRVGGTVNQQVNYTNGYAPVTEF*CCLETS
Trigger: GGAGGTTTCTAGGCAGCAGCAAAACTCTGTGACAGG...TGCATATCCATTTGTGTAATTTACTTGTTGGTTGACTGTGCCTCCCACTCGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp ATATTTACCAACGAGTACAGAAGGGTTTCTGCATTTTATCAACTGGTGTGGCAATCCTTGTTCCTGTCCTaGGTGGGCCCCTTCATGATA +
Preference number: 4 (lower is better)
Translates to: IFTNEYRRVSAFYQLVWQSLFLS*VGPFMI
Trigger: TATCATGAAGGGGCCCACTCAGGACAGGAACAAGGA...TTGCCACACCAGTTGATAAAATGCAGAAACCCTTCTGTACTCGTTGGTAAATAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCGATAGAAACACAAGATaGAAGTCCTTGACCACAGAA +
Preference number: 4 (lower is better)
Translates to: HRFFGVACLQRGNVFPTADRNTR*KSLTTE
Trigger: TTCTGTGGTCAAGGACTTGCATCTTGTGTTTCTATC...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp AACGTGCCTTCACATATGAGCCAGTCCATGAAGCAAAGCAGAAAAGGCAGTGCCAGAAGTAGAATCTACTaGAAGTTTCCAGAAGCACTA +
Preference number: 4 (lower is better)
Translates to: NVPSHMSQSMKQSRKGSARSRIY*KFPEAL
Trigger: TAGTGCTTCTGGAAACTTCCAGTAGATTCTACTTCT...GGCACTGCCTTTTCTGCTTTGCTTCATGGACTGGCTCATATGTGAAGGCACGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp ATATTTACCAACGAGTACAGAAGGGTTTCTGCATTTTATCAACTGGTGTGGCAAGTCACAGAGTTTTGCTaGTGCCTAGAAACCTCCCAG +
Preference number: 4 (lower is better)
Translates to: IFTNEYRRVSAFYQLVWQVTEFC*CLETSQ
Trigger: CTGGGAGGTTTCTAGGCAGCAGCAAAACTCTGTGAC...TTGCCACACCAGTTGATAAAATGCAGAAACCCTTCTGTACTCGTTGGTAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp ATATTTACCAACGAGTACAGAAGGGTTTCTGCATTTTATCAACTGGTGTGGCAAGGGTGCAGACAGAAGTaGATGGACTCCAGAGATAGT +
Preference number: 4 (lower is better)
Translates to: IFTNEYRRVSAFYQLVWQGCRQK*MDSRDS
Trigger: ACTATCTCTGGAGTCCATCCACTTCTGTCTGCACCC...TTGCCACACCAGTTGATAAAATGCAGAAACCCTTCTGTACTCGTTGGTAAATAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR GCA 90 bp ACTCGAGTGGGAGGCACAGTCAACCAACAAGTAAATTACACAAATGGATATGCACAGATTCTTTGGAGTTaGATGCTTGCAACGTGGAAA +
Preference number: 4 (lower is better)
Translates to: TRVGGTVNQQVNYTNGYAQILWS*MLATWK
Trigger: TTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTG...TGCATATCCATTTGTGTAATTTACTTGTTGGTTGACTGTGCCTCCCACTCGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp ATATTTACCAACGAGTACAGAAGGGTTTCTGCATTTTATCAACTGGTGTGGCAATGCATGCTTGCAACGTaGAAATGTGTTTCCCACAGC +
Preference number: 4 (lower is better)
Translates to: IFTNEYRRVSAFYQLVWQCMLAT*KCVSHS
Trigger: GCTGTGGGAAACACATTTCCACGTTGCAAGCATGCA...TTGCCACACCAGTTGATAAAATGCAGAAACCCTTCTGTACTCGTTGGTAAATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CCA 90 bp ATATTTACCAACGAGTACAGAAGGGTTTCTGCATTTTATCAACTGGTGTGGCAACAAATGGATATGCAGTaGCAAATTCTCCATGAAGGG +
Preference number: 4 (lower is better)
Translates to: IFTNEYRRVSAFYQLVWQQMDMQ*QILHEG
Trigger: CCCTTCATGGAGAATTTGCCACTGCATATCCATTTG...TTGCCACACCAGTTGATAAAATGCAGAAACCCTTCTGTACTCGTTGGTAAATAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR TCA 90 bp ATATTTACCAACGAGTACAGAAGGGTTTCTGCATTTTATCAACTGGTGTGGCAACTCTTTATCTCTCCTTaGGGAGTCTGTCTTTTCAAA +
Preference number: 4 (lower is better)
Translates to: IFTNEYRRVSAFYQLVWQLFISP*GVCLFK
Trigger: TTTGAAAAGACAGACTCCTCAAGGAGAGATAAAGAG...TTGCCACACCAGTTGATAAAATGCAGAAACCCTTCTGTACTCGTTGGTAAATAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp GGGGAGGGACCACACGCCTGGAGGATGGCGACTGTAAGACGTGGGGGCTGGGCTGCTCAGCTGGCCCTCTaGGCCCACGTCGATGGGTCC +
Preference number: 5 (lower is better)
Translates to: GEGPHAWRMATVRRGGWAAQLAL*AHVDGS
Trigger: GGACCCATCGACGTGGGCCAAGAGGGCCAGCTGAGC...AGCCCAGCCCCCACGTCTTACAGTCGCCATCCTCCAGGCGTGTGGTCCCTCCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS TCA 90 bp GGCCAGTGGGCGTGGGCGAAGGCTCCATCTCGGCTGCGTAGCTGTTaGGGTGGGAGAGAAGGCGAATCCGGACGGGGTCTGCACGGCTGC +
Preference number: 5 (lower is better)
Translates to: GQWAWAKAPSRLRSC*GGREGESGRGLHGC
Trigger: GCAGCCGTGCAGACCCCGTCCGGATTCGCCTTCTCTCCCACCTCAACAGCTACGCAGCCGAGATGGAGCCTTCGCCCACGCCCACTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS CCA 90 bp CCGGGTGGAAGATGCCCCTCGACTGGGCAGCACATTCCTCCGGGCTaGCAGGATGATGCCTGTGGCTCTGCGAAGGGGAGCGGTTCGGAG +
Preference number: 5 (lower is better)
Translates to: PGGRCPSTGQHIPPG*QDDACGSAKGSGSE
Trigger: CTCCGAACCGCTCCCCTTCGCAGAGCCACAGGCATCATCCTGCCAGCCCGGAGGAATGTGCTGCCCAGTCGAGGGGCATCTTCCACCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS CCA 90 bp GAGAGGAGACACCGGGGAGGACAGGGCTGGGCACTCTTCCCAGGATaGCGAGCTGGTTGCTCAGGGCTGGCAGCCCTGGACAGCTATGGA +
Preference number: 5 (lower is better)
Translates to: ERRHRGGQGWALFPG*RAGCSGLAALDSYG
Trigger: TCCATAGCTGTCCAGGGCTGCCAGCCCTGAGCAACCAGCTCGCCATCCTGGGAAGAGTGCCCAGCCCTGTCCTCCCCGGTGTCTCCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS CCA 90 bp GGGAACAGCCACGTAAGCAGCCGACCCTGTAGGACCAGGGGGTGTTaGGGAGGAAGACTGCAGGAGGGGAGCGATGTGGCTGCTCCTGGC +
Preference number: 5 (lower is better)
Translates to: GNSHVSSRPCRTRGC*GGRLQEGSDVAAPG
Trigger: GCCAGGAGCAGCCACATCGCTCCCCTCCTGCAGTCTTCCTCCCCAACACCCCCTGGTCCTACAGGGTCGGCTGCTTACGTGGCTGTTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp GGGGAGGGACCACACGCCTGGAGGATGGCGACTGTAAGACGTGGGGGCTGGGCTTGGGACTCCACAGCCTaGGATCGGCCAGGCAGTAAC +
Preference number: 5 (lower is better)
Translates to: GEGPHAWRMATVRRGGWAWDSTA*DRPGSN
Trigger: GTTACTGCCTGGCCGATCCAAGGCTGTGGAGTCCCA...AGCCCAGCCCCCACGTCTTACAGTCGCCATCCTCCAGGCGTGTGGTCCCTCCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS CCA 90 bp AGGGCTGGGCACTCTTCCCAGGATGGCGAGCTGGTTGCTCAGGGCTaGCAGCCCTGGACAGCTATGGAAGAAAGACCAGGGCCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: RAGHSSQDGELVAQG*QPWTAMEERPGPGR
Trigger: CCTGCCTGGCCCTGGTCTTTCTTCCATAGCTGTCCAGGGCTGCCAGCCCTGAGCAACCAGCTCGCCATCCTGGGAAGAGTGCCCAGCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS GCA 90 bp TGCGTAGCTGTTGAGGTGGGAGAGAAGGCGAATCCGGACGGGGTCTaGACGGCTGCTGGGCCCTTCAAGGACCCCCAGGTACCTGATGAC +
Preference number: 5 (lower is better)
Translates to: CVAVEVGEKANPDGV*TAAGPFKDPQVPDD
Trigger: GTCATCAGGTACCTGGGGGTCCTTGAAGGGCCCAGCAGCCGTGCAGACCCCGTCCGGATTCGCCTTCTCTCCCACCTCAACAGCTACGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS CCA 90 bp CACTCTTCCCAGGATGGCGAGCTGGTTGCTCAGGGCTGGCAGCCCTaGACAGCTATGGAAGAAAGACCAGGGCCAGGCAGGGAAGGCCAA +
Preference number: 5 (lower is better)
Translates to: HSSQDGELVAQGWQP*TAMEERPGPGREGQ
Trigger: TTGGCCTTCCCTGCCTGGCCCTGGTCTTTCTTCCATAGCTGTCCAGGGCTGCCAGCCCTGAGCAACCAGCTCGCCATCCTGGGAAGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp TCTGAGCAGAGCCAGCTCTGTGGAGTCCTGGTGAACAGGATCTCAGGCGCTCGAAAGGAACAGCCTGCCTaGGGTCCTGGTGCCCTGCAG +
Preference number: 5 (lower is better)
Translates to: SEQSQLCGVLVNRISGARKEQPA*GPGALQ
Trigger: CTGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCTT...TCGAGCGCCTGAGATCCTGTTCACCAGGACTCCACAGAGCTGGCTCTGCTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp GTCCTTGGCTGTTCCAGCAGTCTGGGCTCTGTGAGCCGGATGCAAACCAGGCAGCTATGTTCCAGCCTCTaGGCGTGGGAAGGCTGCAGC +
Preference number: 5 (lower is better)
Translates to: VLGCSSSLGSVSRMQTRQLCSSL*AWEGCS
Trigger: GCTGCAGCCTTCCCACGCCAAGAGGCTGGAACATAG...CTGCCTGGTTTGCATCCGGCTCACAGAGCCCAGACTGCTGGAACAGCCAAGGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS GCA 90 bp CGCCGTTTCTCTATGATCCCTCTGTGTTTCTTCCTGGCTTGCATCTaGGAAGAGCTGGGGGTGGACAGCGGCCTGGCCATCTGGCTCAGC +
Preference number: 5 (lower is better)
Translates to: RRFSMIPLCFFLACI*EELGVDSGLAIWLS
Trigger: GCTGAGCCAGATGGCCAGGCCGCTGTCCACCCCCAGCTCTTCGCAGATGCAAGCCAGGAAGAAACACAGAGGGATCATAGAGAAACGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS GCA 90 bp TCTCGACGCCGTTTCTCTATGATCCCTCTGTGTTTCTTCCTGGCTTaGATCTGCGAAGAGCTGGGGGTGGACAGCGGCCTGGCCATCTGG +
Preference number: 5 (lower is better)
Translates to: SRRRFSMIPLCFFLA*ICEELGVDSGLAIW
Trigger: CCAGATGGCCAGGCCGCTGTCCACCCCCAGCTCTTCGCAGATGCAAGCCAGGAAGAAACACAGAGGGATCATAGAGAAACGGCGTCGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS GCA 90 bp GACCTCAGTGAGGCACTCCCGAAAACCAATGCTCCGGAAGTCAACTaGCAGGGCTCGGGCATCAAAGAATCCTGTCCCACCAGTGGCATG +
Preference number: 5 (lower is better)
Translates to: DLSEALPKTNAPEVN*QGSGIKESCPTSGM
Trigger: CATGCCACTGGTGGGACAGGATTCTTTGATGCCCGAGCCCTGGCAGTTGACTTCCGGAGCATTGGTTTTCGGGAGTGCCTCACTGAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp TCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTCCAGGAGAGCTGCCCAGTCTCCAGGCCTaGGCTGTGGTGGAGAAAGGG +
Preference number: 5 (lower is better)
Translates to: SGEKWNQASETRTAPGELPSLQA*AVVEKG
Trigger: CCCTTTCTCCACCACAGCCAAGGCCTGGAGACTGGG...CAGCTCTCCTGGAGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp TCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTCCAGGAGAGCTGGGGCTGGGCTCTCCATaGCTCAACCCTGGCTCCTGT +
Preference number: 5 (lower is better)
Translates to: SGEKWNQASETRTAPGELGLGSP*LNPGSC
Trigger: ACAGGAGCCAGGGTTGAGCAATGGAGAGCCCAGCCC...CAGCTCTCCTGGAGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGAAACCTTCCTTATTCCTaGGGGCGGGGTGGTGAAGGG +
Preference number: 5 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGNLPYS*GRGGEG
Trigger: CCCTTCACCACCCCGCCCCAAGGAATAAGGAAGGTT...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp CTGTTCTGCTGGGAACGACTGCTGGACCATTTGTTTCCTCTGTTAGAAAAAGTGGAGCCGCTCGGCTCCTaGGGTCGCTTCATGGCGAAC +
Preference number: 5 (lower is better)
Translates to: LFCWERLLDHLFPLLEKVEPLGS*GRFMAN
Trigger: GTTCGCCATGAAGCGACCCAAGGAGCCGAGCGGCTC...CACTTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGAGTGTTTCTTCCTGGCTaGCATCTGCGAAGAGCTGGG +
Preference number: 5 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGVFLPG*HLRRAG
Trigger: CCCAGCTCTTCGCAGATGCAAGCCAGGAAGAAACAC...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp GTCCTTGGCTGTTCCAGCAGTCTGGGCTCTGTGAGCCGGATGCAAACCAGGCAGCGACTGCTGGACCATTaGTTTCCTCTGTTAGAAAAA +
Preference number: 5 (lower is better)
Translates to: VLGCSSSLGSVSRMQTRQRLLDH*FPLLEK
Trigger: TTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCG...CTGCCTGGTTTGCATCCGGCTCACAGAGCCCAGACTGCTGGAACAGCCAAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp AACGTGCCTTCACATATGAGCCAGTCCATGAAGCAAAGCAGAAAAGGCAGTGCCGTCGAGGAAGGCCTCTaGGACGAGGCAACGTTGAAG +
Preference number: 5 (lower is better)
Translates to: NVPSHMSQSMKQSRKGSAVEEGL*DEATLK
Trigger: CTTCAACGTTGCCTCGTCCAAGAGGCCTTCCTCGAC...GGCACTGCCTTTTCTGCTTTGCTTCATGGACTGGCTCATATGTGAAGGCACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp TTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCCCACTATTGGACGAGGCAACGTaGAAGCCAAGGCCTGAGGGT +
Preference number: 5 (lower is better)
Translates to: FFGVACLQRGNVFPTAPLLDEAT*KPRPEG
Trigger: ACCCTCAGGCCTTGGCTTCAACGTTGCCTCGTCCAA...TAGTGGGGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCTCAGAAAGGCTACTGTaGATGCGGTCTCGACGCCGT +
Preference number: 5 (lower is better)
Translates to: HRFFGVACLQRGNVFPTASERLL*MRSRRR
Trigger: ACGGCGTCGAGACCGCATCAACAGTAGCCTTTCTGA...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp AGGAACAGCCTGCCTTGGGTCCTGGTGCCCTGCAGGTTAAAGCTTTTTCCCAGAGAATCATCCTTTCTCTaGCCCCTCCTTGCAGTTATT +
Preference number: 5 (lower is better)
Translates to: RNSLPWVLVPCRLKLFPRESSFL*PLLAVI
Trigger: AATAACTGCAAGGAGGGGCAAGAGAAAGGATGATTC...TCTGGGAAAAAGCTTTAACCTGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp TCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTCCAGGAGAGCTGAGGCTGGAAATGAGGTaGGGACCAAAAGAAGACCTT +
Preference number: 5 (lower is better)
Translates to: SGEKWNQASETRTAPGELRLEMR*GPKEDL
Trigger: AAGGTCTTCTTTTGGTCCCAACCTCATTTCCAGCCT...CAGCTCTCCTGGAGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp CACAGATTCTTTGGAGTTGCATGCTTGCAACGTGGAAATGTGTTTCCCACAGCCTCGGCTTTCTCCAGCTaGGAAGAGCCCTGTTTCTCA +
Preference number: 5 (lower is better)
Translates to: HRFFGVACLQRGNVFPTASAFSS*EEPCFS
Trigger: TGAGAAACAGGGCTCTTCCAAGCTGGAGAAAGCCGA...GGCTGTGGGAAACACATTTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp ATATTTACCAACGAGTACAGAAGGGTTTCTGCATTTTATCAACTGGTGTGGCAAAGGATGGCGAGCTGGTaGCTCAGGGCTGGCAGCCCT +
Preference number: 5 (lower is better)
Translates to: IFTNEYRRVSAFYQLVWQRMASW*LRAGSP
Trigger: AGGGCTGCCAGCCCTGAGCAACCAGCTCGCCATCCT...TTGCCACACCAGTTGATAAAATGCAGAAACCCTTCTGTACTCGTTGGTAAATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp TCTGCAGAACTCAGCCATGCACAGGGTAGGGGAAGAGCATTCTTGGCAAAGGGATCCTTGCAGTTATTTTaGTCCAGCCTGACAGTCCTT +
Preference number: 5 (lower is better)
Translates to: SAELSHAQGRGRAFLAKGSLQLF*SSLTVL
Trigger: AAGGACTGTCAGGCTGGACAAAAATAACTGCAAGGA...TCCCTTTGCCAAGAATGCTCTTCCCCTACCCTGTGCATGGCTGAGTTCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp CAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGGAAGTTCTCAGGCTAGGAAGTaGCCAAACTGCAAGACTACA +
Preference number: 5 (lower is better)
Translates to: QRGNVFPTAPLGILRLGSSQARK*PNCKTT
Trigger: TGTAGTCTTGCAGTTTGGCAACTTCCTAGCCTGAGA...ACTTCCTAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp AGGAACAGCCTGCCTTGGGTCCTGGTGCCCTGCAGGTTAAAGCTTTTTCCCAGATTTGGAGTTGCATGCTaGCAACGTGGAAATGTGTTT +
Preference number: 5 (lower is better)
Translates to: RNSLPWVLVPCRLKLFPRFGVAC*QRGNVF
Trigger: AAACACATTTCCACGTTGCAAGCATGCAACTCCAAA...TCTGGGAAAAAGCTTTAACCTGCAGGGCACCAGGACCCAAGGCAGGCTGTTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp TCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTCCAGGAGAGCTGACAGATTCTTTGGAGTaGCATGCTTGCAACGTGGAA +
Preference number: 5 (lower is better)
Translates to: SGEKWNQASETRTAPGELTDSLE*HACNVE
Trigger: TTCCACGTTGCAAGCATGCAACTCCAAAGAATCTGT...CAGCTCTCCTGGAGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp CTGTTCTGCTGGGAACGACTGCTGGACCATTTGTTTCCTCTGTTAGAAAAAGTGCCCTGTCACAGAGTTTaGCTGCTGCCTAGAAACCTC +
Preference number: 5 (lower is better)
Translates to: LFCWERLLDHLFPLLEKVPCHRV*LLPRNL
Trigger: GAGGTTTCTAGGCAGCAGCAAAACTCTGTGACAGGG...CACTTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp GGACTCATCTGTTCAGGTGAGAAATGGAACCAAGCCTCTGAGACCAGAACAGCTGGCATCACAGATTCTTaGGAGTTGCATGCTTGCAAC +
Preference number: 5 (lower is better)
Translates to: GLICSGEKWNQASETRTAGITDS*ELHACN
Trigger: GTTGCAAGCATGCAACTCCAAAGAATCTGTGATGCC...AGCTGTTCTGGTCTCAGAGGCTTGGTTCCATTTCTCACCTGAACAGATGAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp AACGTGCCTTCACATATGAGCCAGTCCATGAAGCAAAGCAGAAAAGGCAGTGCCAGACACCAGGAAGGCTaGGGGATAGAAACACAAGAT +
Preference number: 5 (lower is better)
Translates to: NVPSHMSQSMKQSRKGSARHQEG*GIETQD
Trigger: ATCTTGTGTTTCTATCCCCAAGCCTTCCTGGTGTCT...GGCACTGCCTTTTCTGCTTTGCTTCATGGACTGGCTCATATGTGAAGGCACGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp ACTCGAGTGGGAGGCACAGTCAACCAACAAGTAAATTACACAAATGGATATGCACGGGGAAACTGGCCTTaGCCTTCTGTTACCTCCTCT +
Preference number: 5 (lower is better)
Translates to: TRVGGTVNQQVNYTNGYARGNWP*PSVTSS
Trigger: AGAGGAGGTAACAGAAGGCAAAGGCCAGTTTCCCCG...TGCATATCCATTTGTGTAATTTACTTGTTGGTTGACTGTGCCTCCCACTCGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp AACGTGCCTTCACATATGAGCCAGTCCATGAAGCAAAGCAGAAAAGGCAGTGCCACAAGATGCAAGTCCTaGACCACAGAATCAGATCAC +
Preference number: 5 (lower is better)
Translates to: NVPSHMSQSMKQSRKGSATRCKS*TTESDH
Trigger: GTGATCTGATTCTGTGGTCAAGGACTTGCATCTTGT...GGCACTGCCTTTTCTGCTTTGCTTCATGGACTGGCTCATATGTGAAGGCACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp CTGTTCTGCTGGGAACGACTGCTGGACCATTTGTTTCCTCTGTTAGAAAAAGTGCTCTTATCCACTTCTTaGAAAGGGCCCTTTTCCCCA +
Preference number: 5 (lower is better)
Translates to: LFCWERLLDHLFPLLEKVLLSTS*KGPFSP
Trigger: TGGGGAAAAGGGCCCTTTCAAAGAAGTGGATAAGAG...CACTTTTTCTAACAGAGGAAACAAATGGTCCAGCAGTCGTTCCCAGCAGAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS-3UTR CAA 90 bp CAACGTGGAAATGTGTTTCCCACAGCCCCACTAGGGATTCTCAGGCTAGGAAGTTTCAACAAGTATTTATaGAACGCCAACTATGGACCA +
Preference number: 5 (lower is better)
Translates to: QRGNVFPTAPLGILRLGSFNKYL*NANYGP
Trigger: TGGTCCATAGTTGGCGTTCAATAAATACTTGTTGAA...ACTTCCTAGCCTGAGAATCCCTAGTGGGGCTGTGGGAAACACATTTCCACGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS CCA 72 bp GGGTCGCTGGCCTCTCTAGGGGGCGGGCCCTCCGGGTaGAAGATGCCCCTCGACTGGGCAGCACATTCCTCC +
Preference number: 6 (lower is better)
Translates to: GSLASLGGGPSG*KMPLDWAAHSS
Trigger: GGAGGAATGTGCTGCCCAGTCGAGGGGCATCTTCCACCCGGAGGGCCCGCCCCCTAGAGAGGCCAGCGACCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS CAA 72 bp GGACAGCGGCCTGGCCATCTGGCTCAGCTGGCCCTCTaGGCCCACGTCGATGGGTCCGTCGGACTCCCCGTC +
Preference number: 6 (lower is better)
Translates to: GQRPGHLAQLAL*AHVDGSVGLPV
Trigger: GACGGGGAGTCCGACGGACCCATCGACGTGGGCCAAGAGGGCCAGCTGAGCCAGATGGCCAGGCCGCTGTCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS CCA 72 bp CACCGGGGAGGACAGGGCTGGGCACTCTTCCCAGGATaGCGAGCTGGTTGCTCAGGGCTGGCAGCCCTGGAC +
Preference number: 6 (lower is better)
Translates to: HRGGQGWALFPG*RAGCSGLAALD
Trigger: GTCCAGGGCTGCCAGCCCTGAGCAACCAGCTCGCCATCCTGGGAAGAGTGCCCAGCCCTGTCCTCCCCGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS TCA 72 bp GCGTGGGCGAAGGCTCCATCTCGGCTGCGTAGCTGTTaGGGTGGGAGAGAAGGCGAATCCGGACGGGGTCTG +
Preference number: 6 (lower is better)
Translates to: AWAKAPSRLRSC*GGREGESGRGL
Trigger: CAGACCCCGTCCGGATTCGCCTTCTCTCCCACCTCAACAGCTACGCAGCCGAGATGGAGCCTTCGCCCACGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS TCA 72 bp CTCGACTGGGCAGCACATTCCTCCGGGCTGGCAGGATaGTGCCTGTGGCTCTGCGAAGGGGAGCGGTTCGGA +
Preference number: 6 (lower is better)
Translates to: LDWAAHSSGLAG*CLWLCEGERFG
Trigger: TCCGAACCGCTCCCCTTCGCAGAGCCACAGGCATCATCCTGCCAGCCCGGAGGAATGTGCTGCCCAGTCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS GCA 72 bp GTTGAGGTGGGAGAGAAGGCGAATCCGGACGGGGTCTaGACGGCTGCTGGGCCCTTCAAGGACCCCCAGGTA +
Preference number: 6 (lower is better)
Translates to: VEVGEKANPDGV*TAAGPFKDPQV
Trigger: TACCTGGGGGTCCTTGAAGGGCCCAGCAGCCGTGCAGACCCCGTCCGGATTCGCCTTCTCTCCCACCTCAAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS CCA 72 bp AGATGCCCCTCGACTGGGCAGCACATTCCTCCGGGCTaGCAGGATGATGCCTGTGGCTCTGCGAAGGGGAGC +
Preference number: 6 (lower is better)
Translates to: RCPSTGQHIPPG*QDDACGSAKGS
Trigger: GCTCCCCTTCGCAGAGCCACAGGCATCATCCTGCCAGCCCGGAGGAATGTGCTGCCCAGTCGAGGGGCATCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS CCA 72 bp GTTTCTTCCTGGCTTGCATCTGCGAAGAGCTGGGGGTaGACAGCGGCCTGGCCATCTGGCTCAGCTGGCCCT +
Preference number: 6 (lower is better)
Translates to: VSSWLASAKSWG*TAAWPSGSAGP
Trigger: AGGGCCAGCTGAGCCAGATGGCCAGGCCGCTGTCCACCCCCAGCTCTTCGCAGATGCAAGCCAGGAAGAAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS CCA 72 bp CAGGATGGCGAGCTGGTTGCTCAGGGCTGGCAGCCCTaGACAGCTATGGAAGAAAGACCAGGGCCAGGCAGG +
Preference number: 6 (lower is better)
Translates to: QDGELVAQGWQP*TAMEERPGPGR
Trigger: CCTGCCTGGCCCTGGTCTTTCTTCCATAGCTGTCCAGGGCTGCCAGCCCTGAGCAACCAGCTCGCCATCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS CCA 72 bp CACGTAAGCAGCCGACCCTGTAGGACCAGGGGGTGTTaGGGAGGAAGACTGCAGGAGGGGAGCGATGTGGCT +
Preference number: 6 (lower is better)
Translates to: HVSSRPCRTRGC*GGRLQEGSDVA
Trigger: AGCCACATCGCTCCCCTCCTGCAGTCTTCCTCCCCAACACCCCCTGGTCCTACAGGGTCGGCTGCTTACGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS CCA 72 bp CTCTGTGTTTCTTCCTGGCTTGCATCTGCGAAGAGCTaGGGGTGGACAGCGGCCTGGCCATCTGGCTCAGCT +
Preference number: 6 (lower is better)
Translates to: LCVSSWLASAKS*GWTAAWPSGSA
Trigger: AGCTGAGCCAGATGGCCAGGCCGCTGTCCACCCCCAGCTCTTCGCAGATGCAAGCCAGGAAGAAACACAGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS CCA 72 bp AGCTGGTTGCTCAGGGCTGGCAGCCCTGGACAGCTATaGAAGAAAGACCAGGGCCAGGCAGGGAAGGCCAAA +
Preference number: 6 (lower is better)
Translates to: SWLLRAGSPGQL*KKDQGQAGKAK
Trigger: TTTGGCCTTCCCTGCCTGGCCCTGGTCTTTCTTCCATAGCTGTCCAGGGCTGCCAGCCCTGAGCAACCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS CCA 72 bp CACTCTTCCCAGGATGGCGAGCTGGTTGCTCAGGGCTaGCAGCCCTGGACAGCTATGGAAGAAAGACCAGGG +
Preference number: 6 (lower is better)
Translates to: HSSQDGELVAQG*QPWTAMEERPG
Trigger: CCCTGGTCTTTCTTCCATAGCTGTCCAGGGCTGCCAGCCCTGAGCAACCAGCTCGCCATCCTGGGAAGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS GCA 72 bp GAGGCACTCCCGAAAACCAATGCTCCGGAAGTCAACTaGCAGGGCTCGGGCATCAAAGAATCCTGTCCCACC +
Preference number: 6 (lower is better)
Translates to: EALPKTNAPEVN*QGSGIKESCPT
Trigger: GGTGGGACAGGATTCTTTGATGCCCGAGCCCTGGCAGTTGACTTCCGGAGCATTGGTTTTCGGGAGTGCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS GCA 72 bp CGTTTCTCTATGATCCCTCTGTGTTTCTTCCTGGCTTaGATCTGCGAAGAGCTGGGGGTGGACAGCGGCCTG +
Preference number: 6 (lower is better)
Translates to: RFSMIPLCFFLA*ICEELGVDSGL
Trigger: CAGGCCGCTGTCCACCCCCAGCTCTTCGCAGATGCAAGCCAGGAAGAAACACAGAGGGATCATAGAGAAACG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS TCA 72 bp AATCCTGTCCCACCAGTGGCATGGAGCATTTTCAAGTaGTCCACCGTCATCTGCAAGACCTCGGCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: NPVPPVAWSIFK*STVICKTSAFS
Trigger: GGAGAAAGCCGAGGTCTTGCAGATGACGGTGGATCACTTGAAAATGCTCCATGCCACTGGTGGGACAGGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4
CDS CAA 90 bp TCAAAGGCAGTGGGGACCAAGCGTCGCAATTCAGAAAGGCTACTGTaGATGCGGTCTCGACGCCGTTTCTCTATGATCCCTCTGTGTTTC +
Preference number: 6 (lower is better)
Translates to: SKAVGTKRRNSERLL*MRSRRRFSMIPLCF
Trigger: GAAACACAGAGGGATCATAGAGAAACGGCGTCGAGACCGCATCAACAGTAGCCTTTCTGAATTGCGACGCTTGGTCCCCACTGCCTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000372852.4