Pregenerated sensors for HEXD-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000279066

Ensembl transcript IDs: ENST00000624980.1

Found 6 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CCCGAACATACCTTGCTGGGCAAAGGCCCAGCTGAAGGAACATCCTaGTCATATTCTGCTGGGAACAAGGACCCAACTGCCTCATCATGG	+
Preference number: 5 (lower is better) Translates to: PEHTLLGKGPAEGTS*SYSAGNKDPTASSW Trigger: CCATGATGAGGCAGTTGGGTCCTTGTTCCCAGCAGAATATGATCAGGATGTTCCTTCAGCTGGGCCTTTGCCCAGCAAGGTATGTTCGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624980.1
CDS GCA 72 bp	CCGACCACACGGCCCAGGAACATCCCGAACATACCTTaGTGGGCAAAGGCCCAGCTGAAGGAACATCCTGAT	+
Preference number: 6 (lower is better) Translates to: PTTRPRNIPNIP*WAKAQLKEHPD Trigger: ATCAGGATGTTCCTTCAGCTGGGCCTTTGCCCAGCAAGGTATGTTCGGGATGTTCCTGGGCCGTGTGGTCGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624980.1
CDS TCA 72 bp	ACCTTGCTGGGCAAAGGCCCAGCTGAAGGAACATCCTaGTCATATTCTGCTGGGAACAAGGACCCAACTGCC	+
Preference number: 6 (lower is better) Translates to: TLLGKGPAEGTS*SYSAGNKDPTA Trigger: GGCAGTTGGGTCCTTGTTCCCAGCAGAATATGATCAGGATGTTCCTTCAGCTGGGCCTTTGCCCAGCAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624980.1
CDS CCA 72 bp	TATTCTGCTGGGAACAAGGACCCAACTGCCTCATCATaGGAACATCTCTCAACATCTTCCCAGGCAGAAGCC	+
Preference number: 6 (lower is better) Translates to: YSAGNKDPTASS*EHLSTSSQAEA Trigger: GGCTTCTGCCTGGGAAGATGTTGAGAGATGTTCCCATGATGAGGCAGTTGGGTCCTTGTTCCCAGCAGAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624980.1
CDS TCA 72 bp	ACATCCCGAACATACCTTGCTGGGCAAAGGCCCAGCTaGAGGAACATCCTGATCATATTCTGCTGGGAACAA	+
Preference number: 6 (lower is better) Translates to: TSRTYLAGQRPS*RNILIIFCWEQ Trigger: TTGTTCCCAGCAGAATATGATCAGGATGTTCCTTCAGCTGGGCCTTTGCCCAGCAAGGTATGTTCGGGATGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624980.1
CDS GCA 72 bp	ATCCTGATCATATTCTGCTGGGAACAAGGACCCAACTaGCTCATCATGGGAACATCTCTCAACATCTTCCCA	+
Preference number: 6 (lower is better) Translates to: ILIIFCWEQGPN*LIMGTSLNIFP Trigger: TGGGAAGATGTTGAGAGATGTTCCCATGATGAGGCAGTTGGGTCCTTGTTCCCAGCAGAATATGATCAGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000624980.1

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