RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HEXD (Homo sapiens)

Ensembl gene IDs: ENSG00000169660

Ensembl transcript IDs: ENST00000327949.15, ENST00000337014.10, ENST00000577944.5, ENST00000578130.5, ENST00000578616.5, ENST00000578632.1, ENST00000578775.2, ENST00000580235.5, ENST00000581482.5, ENST00000582131.1, ENST00000582315.5, ENST00000582429.5, ENST00000583354.5, ENST00000583978.5, ENST00000585077.1, ENST00000644009.1, ENST00000644886.1

Found 625 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCCCGCTGCCCGCCACCTGCAGCCACTGCACGTGGTTCCTGAGGTaGTGCTCAACAGGGGGCACGGCCTGGCTGGGCCCCGTGGCACCC +
Preference number: 1 (lower is better)
Translates to: GPLPATCSHCTWFLR*CSTGGTAWLGPVAP
Trigger: GGGTGCCACGGGGCCCAGCCAGGCCGTGCCCCCTGTTGAGCACCACCTCAGGAACCACGTGCAGTGGCTGCAGGTGGCGGGCAGCGGGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR TCA 90 bp GGTGCTCAACAGGGGGCACGGCCTGGCTGGGCCCCGTGGCACCCTTaGAGGCACTGGCTGCCCACAGCTGCGGAAAGCCGCACCGCCGGT +
Preference number: 1 (lower is better)
Translates to: GAQQGARPGWAPWHP*RHWLPTAAESRTAG
Trigger: ACCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGCCCAGCCAGGCCGTGCCCCCTGTTGAGCACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR GCA 90 bp CCGCTGCCCGCCACCTGCAGCCACTGCACGTGGTTCCTGAGGTGGTaGTCAACAGGGGGCACGGCCTGGCTGGGCCCCGTGGCACCCTTG +
Preference number: 1 (lower is better)
Translates to: PLPATCSHCTWFLRW*STGGTAWLGPVAPL
Trigger: CAAGGGTGCCACGGGGCCCAGCCAGGCCGTGCCCCCTGTTGAGCACCACCTCAGGAACCACGTGCAGTGGCTGCAGGTGGCGGGCAGCGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR CCA 90 bp CAGGCAGGTCTCGGAGCATGTCGTCCCACACCAGGGGTGTCACGCTaGGGCGCCGGGCCTTCACGCCGCTGGCCACCGCCCGCATGTGTG +
Preference number: 1 (lower is better)
Translates to: QAGLGACRPTPGVSR*GAGPSRRWPPPACV
Trigger: CACACATGCGGGCGGTGGCCAGCGGCGTGAAGGCCCGGCGCCCCAGCGTGACACCCCTGGTGTGGGACGACATGCTCCGAGACCTGCCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR GCA 90 bp CCCTGCAGTGAGTCCGTGGGCCCGCTGCCCGCCACCTGCAGCCACTaGACGTGGTTCCTGAGGTGGTGCTCAACAGGGGGCACGGCCTGG +
Preference number: 1 (lower is better)
Translates to: PCSESVGPLPATCSH*TWFLRWCSTGGTAW
Trigger: CCAGGCCGTGCCCCCTGTTGAGCACCACCTCAGGAACCACGTGCAGTGGCTGCAGGTGGCGGGCAGCGGGCCCACGGACTCACTGCAGGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR GCA 90 bp GGGCACGGCCTGGCTGGGCCCCGTGGCACCCTTGAAGGCACTGGCTaGCCACAGCTGCGGAAAGCCGCACCGCCGGTACTTCTGCATGAG +
Preference number: 1 (lower is better)
Translates to: GHGLAGPRGTLEGTG*PQLRKAAPPVLLHE
Trigger: CTCATGCAGAAGTACCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGCCCAGCCAGGCCGTGCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR CCA 90 bp GCAGCCGCTGGGCGCCTGGGTGTAGCTCCAGGACCTGGTCAATCATaGCGCCCACCAGCGCCAGGGACTCTGCCTCGTGGGGGTTCAGGG +
Preference number: 1 (lower is better)
Translates to: AAAGRLGVAPGPGQS*RPPAPGTLPRGGSG
Trigger: CCCTGAACCCCCACGAGGCAGAGTCCCTGGCGCTGGTGGGCGCCATGATTGACCAGGTCCTGGAGCTACACCCAGGCGCCCAGCGGCTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
3UTR GCA 90 bp CGCCGCTGGCCACCGCCCGCATGTGTGACAGGCACAACTTCCCCGTaGTGTTCTGCTCTTGCTGTAGCCACCGGCGCGAGGCCTCCCCCT +
Preference number: 1 (lower is better)
Translates to: RRWPPPACVTGTTSP*CSALAVATGARPPP
Trigger: AGGGGGAGGCCTCGCGCCGGTGGCTACAGCAAGAGCAGAACAGCACGGGGAAGTTGTGCCTGTCACACATGCGGGCGGTGGCCAGCGGCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR CCA 90 bp CACCCGATGTGCAGCCGCTGGGCGCCTGGGTGTAGCTCCAGGACCTaGTCAATCATGGCGCCCACCAGCGCCAGGGACTCTGCCTCGTGG +
Preference number: 1 (lower is better)
Translates to: HPMCSRWAPGCSSRT*SIMAPTSARDSASW
Trigger: CCACGAGGCAGAGTCCCTGGCGCTGGTGGGCGCCATGATTGACCAGGTCCTGGAGCTACACCCAGGCGCCCAGCGGCTGCACATCGGGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
3UTR CCA 90 bp CACTGCACGTGGTTCCTGAGGTGGTGCTCAACAGGGGGCACGGCCTaGCTGGGCCCCGTGGCACCCTTGAAGGCACTGGCTGCCCACAGC +
Preference number: 1 (lower is better)
Translates to: HCTWFLRWCSTGGTA*LGPVAPLKALAAHS
Trigger: GCTGTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGCCCAGCCAGGCCGTGCCCCCTGTTGAGCACCACCTCAGGAACCACGTGCAGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR GCA 90 bp GCCACCGCCCGCATGTGTGACAGGCACAACTTCCCCGTGCTGTTCTaGTCTTGCTGTAGCCACCGGCGCGAGGCCTCCCCCTCTCCGAGG +
Preference number: 1 (lower is better)
Translates to: ATARMCDRHNFPVLF*SCCSHRREASPSPR
Trigger: CCTCGGAGAGGGGGAGGCCTCGCGCCGGTGGCTACAGCAAGAGCAGAACAGCACGGGGAAGTTGTGCCTGTCACACATGCGGGCGGTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR GCA 90 bp AGGATGATGCCCTGCAGTGAGTCCGTGGGCCCGCTGCCCGCCACCTaGAGCCACTGCACGTGGTTCCTGAGGTGGTGCTCAACAGGGGGC +
Preference number: 1 (lower is better)
Translates to: RMMPCSESVGPLPAT*SHCTWFLRWCSTGG
Trigger: GCCCCCTGTTGAGCACCACCTCAGGAACCACGTGCAGTGGCTGCAGGTGGCGGGCAGCGGGCCCACGGACTCACTGCAGGGCATCATCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR GCA 90 bp TGGCTGGGCCCCGTGGCACCCTTGAAGGCACTGGCTGCCCACAGCTaGGGAAAGCCGCACCGCCGGTACTTCTGCATGAGGAGGACCTTG +
Preference number: 1 (lower is better)
Translates to: WLGPVAPLKALAAHS*GKPHRRYFCMRRTL
Trigger: CAAGGTCCTCCTCATGCAGAAGTACCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGCCCAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR CCA 90 bp AGGCCTGCAGGCACCAGCGTGGACGAATCTCCGACTTGGTGTTCATaGAAATGCTTGCTGCAAGAGGCTGACGGCCAGAGGGCAGGAGGG +
Preference number: 1 (lower is better)
Translates to: RPAGTSVDESPTWCS*KCLLQEADGQRAGG
Trigger: CCCTCCTGCCCTCTGGCCGTCAGCCTCTTGCAGCAAGCATTTCCATGAACACCAAGTCGGAGATTCGTCCACGCTGGTGCCTGCAGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
3UTR CCA 90 bp CCTCCCATGAGGCCTGCAGGCACCAGCGTGGACGAATCTCCGACTTaGTGTTCATGGAAATGCTTGCTGCAAGAGGCTGACGGCCAGAGG +
Preference number: 1 (lower is better)
Translates to: PPMRPAGTSVDESPT*CSWKCLLQEADGQR
Trigger: CCTCTGGCCGTCAGCCTCTTGCAGCAAGCATTTCCATGAACACCAAGTCGGAGATTCGTCCACGCTGGTGCCTGCAGGCCTCATGGGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
3UTR CCA 90 bp ACATACCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATaGAGGCTGACTTGTGTGACAAGGGCAAGGATGTTGCTGCCAGGG +
Preference number: 1 (lower is better)
Translates to: TYLLPSSSASTELRR*RLTCVTRARMLLPG
Trigger: CCCTGGCAGCAACATCCTTGCCCTTGTCACACAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGGTATGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
ENST00000583354.5
3UTR GCA 90 bp ACCTGCAGCTTCCACTCTTTATTTCCAAAGAATCAGTGTCACACATaGAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTT +
Preference number: 1 (lower is better)
Translates to: TCSFHSLFPKNQCHT*RSQSGSPCAASFCV
Trigger: AACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAATAAAGAGTGGAAGCTGCAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327949.15
3UTR CAA 90 bp TGGTGCTCAACAGGGGGCACGGCCTGGCTGGGCCCCGTGGCACCCTaGAAGGCACTGGCTGCCCACAGCTGCGGAAAGCCGCACCGCCGG +
Preference number: 2 (lower is better)
Translates to: WCSTGGTAWLGPVAP*KALAAHSCGKPHRR
Trigger: CCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGCCCAGCCAGGCCGTGCCCCCTGTTGAGCACCA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR-3UTR GCA 90 bp AGCACCGGCTCCACCAGCTGCGGCACCCCGGACGCTGCGAGCTGGTCCTCAGGCCAGCGCCAGGGACTCTaGCTCGTGGGGGTTCAGGGT +
Preference number: 2 (lower is better)
Translates to: STGSTSCGTPDAASWSSGQRQGL*LVGVQG
Trigger: ACCCTGAACCCCCACGAGGCAGAGTCCCTGGCGCTG...GCCTGAGGACCAGCTCGCAGCGTCCGGGGTGCCGCAGCTGGTGGAGCCGGTGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR-3UTR GCA 90 bp ACATCTTCATCAAATCCTCCGGCCGCGTCCCCGTCCCTGGGCCGCCGCGCCTGCCTGGCTGCCCACAGCTaGGGAAAGCCGCACCGCCGG +
Preference number: 2 (lower is better)
Translates to: TSSSNPPAASPSLGRRACLAAHS*GKPHRR
Trigger: CCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAG...GCAGGCGCGGCGGCCCAGGGACGGGGACGCGGCCGGAGGATTTGATGAAGATGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR-3UTR CCA 90 bp TGGTGCTCAACAGGGGGCACGGCCTGGCTGGGCCCCGTGGCACCCTTGAAGGCAGGCACGACGCCCACGTaGGCCCGTATTGCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: WCSTGGTAWLGPVAPLKAGTTPT*ARIAQA
Trigger: GGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCC...TGCCTTCAAGGGTGCCACGGGGCCCAGCCAGGCCGTGCCCCCTGTTGAGCACCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR-3UTR CCA 90 bp GTCGGCCGTGTAGTCCCAGAGCACCGGCTCCACCAGCTGCGGCACCCCGGACGCGGACCTGGTCAATCATaGCGCCCACCAGCGCCAGGG +
Preference number: 2 (lower is better)
Translates to: VGRVVPEHRLHQLRHPGRGPGQS*RPPAPG
Trigger: CCCTGGCGCTGGTGGGCGCCATGATTGACCAGGTCC...GCGTCCGGGGTGCCGCAGCTGGTGGAGCCGGTGCTCTGGGACTACACGGCCGAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR-3UTR CCA 90 bp ACACCAGGGGTGTCACGCTGGGGCGCCGGGCCTTCACGCCGCTGGCCACCGCCCTGTAGCTCCAGGACCTaGTCAATCATGGCGCCCACC +
Preference number: 2 (lower is better)
Translates to: TPGVSRWGAGPSRRWPPPCSSRT*SIMAPT
Trigger: GGTGGGCGCCATGATTGACCAGGTCCTGGAGCTACA...GGGCGGTGGCCAGCGGCGTGAAGGCCCGGCGCCCCAGCGTGACACCCCTGGTGT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR-3UTR GCA 90 bp ACATCTTCATCAAATCCTCCGGCCGCGTCCCCGTCCCTGGGCCGCCGCGCCTGCCCTGAGCAACGTCCCTaGCAGGGCTGGTGGGTGGCA +
Preference number: 2 (lower is better)
Translates to: TSSSNPPAASPSLGRRACPEQRP*QGWWVA
Trigger: TGCCACCCACCAGCCCTGGCAGGGACGTTGCTCAGG...GCAGGCGCGGCGGCCCAGGGACGGGGACGCGGCCGGAGGATTTGATGAAGATGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
3UTR-3UTR CCA 90 bp CCACTGTGCCAGGAGGCTGAGCGCTGCGGGCTGGATGTGCTGAACCATGACCGGGGCACGACGCCCACGTaGGCCCGTATTGCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: PLCQEAERCGLDVLNHDRGTTPT*ARIAQA
Trigger: GGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCC...CCGGTCATGGTTCAGCACATCCAGCCCGCAGCGCTCAGCCTCCTGGCACAGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
3UTR-3UTR CCA 90 bp CTTGCCGTGCACATCCAGGTCGGCCGTGTAGTCCCAGAGCACCGGCTCCACCAGGGGCCTTCACGCCGCTaGCCACCGCCCGCATGTGTG +
Preference number: 2 (lower is better)
Translates to: LAVHIQVGRVVPEHRLHQGPSRR*PPPACV
Trigger: CACACATGCGGGCGGTGGCCAGCGGCGTGAAGGCCC...CTGGTGGAGCCGGTGCTCTGGGACTACACGGCCGACCTGGATGTGCACGGCAAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR-3UTR GCA 90 bp CCAGGGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGCCGCTGCCCGCCACCTaGAGCCACTGCACGTGGTTC +
Preference number: 2 (lower is better)
Translates to: PGPSGTECGQDTAGPEGTPLPAT*SHCTWF
Trigger: GAACCACGTGCAGTGGCTGCAGGTGGCGGGCAGCGG...CGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR-3UTR GCA 90 bp AGCCTCCAGCTCCTGCACGAGGGTGCTCCACTGTGCCAGGAGGCTGAGCGCTGCGTGTGGGCAAGACACTaGTGGGCCAGAGGGCACGAC +
Preference number: 2 (lower is better)
Translates to: SLQLLHEGAPLCQEAERCVWARH*WARGHD
Trigger: GTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACAC...GCAGCGCTCAGCCTCCTGGCACAGTGGAGCACCCTCGTGCAGGAGCTGGAGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
3UTR-3UTR GCA 90 bp GACAAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACAGGCTCTCCCCCAGGGGCTaGCCAGGGCCCTCAGGAACT +
Preference number: 2 (lower is better)
Translates to: DKGKDVAAREGAGPLPNRLSPRG*PGPSGT
Trigger: AGTTCCTGAGGGCCCTGGGCAGCCCCTGGGGGAGAG...CCTGTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
3UTR-3UTR GCA 90 bp TTGCAGCCGCTGCAGGCTGGGGTGCACGTTTTCCTCCAGCCACTCCTCCACGGCGCTCCTGCACGAGGGTaGTCCACTGTGCCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: LQPLQAGVHVFLQPLLHGAPARG*STVPGG
Trigger: GCCTCCTGGCACAGTGGAGCACCCTCGTGCAGGAGC...GCCGTGGAGGAGTGGCTGGAGGAAAACGTGCACCCCAGCCTGCAGCGGCTGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
3UTR-3UTR GCA 90 bp AGGTCTCGGAGCATGTCGTCCCACACCAGGGGTGTCACGCTGGGGCGCCGGGCCTTCCCCGTGCTGTTCTaGTCTTGCTGTAGCCACCGG +
Preference number: 2 (lower is better)
Translates to: RSRSMSSHTRGVTLGRRAFPVLF*SCCSHR
Trigger: CCGGTGGCTACAGCAAGAGCAGAACAGCACGGGGAA...GGCCCGGCGCCCCAGCGTGACACCCCTGGTGTGGGACGACATGCTCCGAGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR-3UTR GCA 90 bp CTCCTGCACGAGGGTGCTCCACTGTGCCAGGAGGCTGAGCGCTGCGGGCTGGATCACGTGGGCCCGTATTaGCCAGGCCATTTGGCAGTG +
Preference number: 2 (lower is better)
Translates to: LLHEGAPLCQEAERCGLDHVGPY*PGHLAV
Trigger: CACTGCCAAATGGCCTGGGCAATACGGGCCCACGTG...ATCCAGCCCGCAGCGCTCAGCCTCCTGGCACAGTGGAGCACCCTCGTGCAGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
3UTR-3UTR GCA 90 bp CGCTGCGGGCTGGATGTGCTGAACCATGACCGGGTGGATGAGCTTCCGCTGGCGTCCTCCCATGAGGCCTaGAGGCACCAGCGTGGACGA +
Preference number: 2 (lower is better)
Translates to: RCGLDVLNHDRVDELPLASSHEA*RHQRGR
Trigger: TCGTCCACGCTGGTGCCTGCAGGCCTCATGGGAGGA...CGCCAGCGGAAGCTCATCCACCCGGTCATGGTTCAGCACATCCAGCCCGCAGCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578616.5
3UTR-3UTR GCA 90 bp GGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCAGGAGGCTGAGCGCTaGGGGCTGGATGTGCTGAAC +
Preference number: 2 (lower is better)
Translates to: GPQELSVGKTLLGQRARRQEAER*GLDVLN
Trigger: GTTCAGCACATCCAGCCCGCAGCGCTCAGCCTCCTG...GCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
3UTR-3UTR GCA 90 bp CGAGCTGGTCCTCAGGCAGGTCTCGGAGCATGTCGTCCCACACCAGGGGTGTCAGCTCCTGCACGAGGGTaGTCCACTGTGCCAGGAGGC +
Preference number: 2 (lower is better)
Translates to: RAGPQAGLGACRPTPGVSAPARG*STVPGG
Trigger: GCCTCCTGGCACAGTGGAGCACCCTCGTGCAGGAGC...TGACACCCCTGGTGTGGGACGACATGCTCCGAGACCTGCCTGAGGACCAGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR-3UTR GCA 90 bp TTGCAGCCGCTGCAGGCTGGGGTGCACGTTTTCCTCCAGCCACTCCTCCACGGCGCAGCCTCCAGCTCCTaGACGAGGGTGCTCCACTGT +
Preference number: 2 (lower is better)
Translates to: LQPLQAGVHVFLQPLLHGAASSS*TRVLHC
Trigger: ACAGTGGAGCACCCTCGTGCAGGAGCTGGAGGCTGC...GCCGTGGAGGAGTGGCTGGAGGAAAACGTGCACCCCAGCCTGCAGCGGCTGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
3UTR-3UTR GCA 90 bp GGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCACCTCGCTGAGGTCCTaGAGCAGAGCTTGCAGCCGC +
Preference number: 2 (lower is better)
Translates to: GPQELSVGKTLLGQRARRTSLRS*SRACSR
Trigger: GCGGCTGCAAGCTCTGCTGCAGGACCTCAGCGAGGT...GCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
3UTR-3UTR GCA 90 bp CCAGAGCACCGGCTCCACCAGCTGCGGCACCCCGGACGCTGCGAGCTGGTCCTCGGCACAACTTCCCCGTaGTGTTCTGCTCTTGCTGTA +
Preference number: 2 (lower is better)
Translates to: PEHRLHQLRHPGRCELVLGTTSP*CSALAV
Trigger: TACAGCAAGAGCAGAACAGCACGGGGAAGTTGTGCC...GAGGACCAGCTCGCAGCGTCCGGGGTGCCGCAGCTGGTGGAGCCGGTGCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR-3UTR CCA 90 bp AGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACAGGGTCCGCAGCCGCTGCAGGCTaGGGTGCACGTTTTCCTCCA +
Preference number: 2 (lower is better)
Translates to: RARMLLPGKEPAPSLTGSAAAAG*GARFPP
Trigger: TGGAGGAAAACGTGCACCCCAGCCTGCAGCGGCTGC...GGACCCTGTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
3UTR-3UTR CCA 90 bp CAGGAGGCTGAGCGCTGCGGGCTGGATGTGCTGAACCATGACCGGGTGGATGAGGGACCTGGTCAATCATaGCGCCCACCAGCGCCAGGG +
Preference number: 2 (lower is better)
Translates to: QEAERCGLDVLNHDRVDEGPGQS*RPPAPG
Trigger: CCCTGGCGCTGGTGGGCGCCATGATTGACCAGGTCC...CTCATCCACCCGGTCATGGTTCAGCACATCCAGCCCGCAGCGCTCAGCCTCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR-3UTR TCA 90 bp GGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCAGGGCCCTCAGGAACTaGGTGTGGGCAAGACACTGC +
Preference number: 2 (lower is better)
Translates to: GPQELSVGKTLLGQRARRRALRN*VWARHC
Trigger: GCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCCT...GCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
3UTR-3UTR TCA 90 bp CGGGTGGATGAGCTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACTTGCTGCAAGAGGCTaGCGGCCAGAGGGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: RVDELPLAVVGAEPASDILAARG*RPEGRR
Trigger: CCTCCTGCCCTCTGGCCGTCAGCCTCTTGCAGCAAG...TATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAGCTCATCCACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578616.5
3UTR-3UTR GCA 90 bp CGCCGCTGGCCACCGCCCGCATGTGTGACAGGCACAACTTCCCCGTGCTGTTCTCACGTGGGCCCGTATTaGCCAGGCCATTTGGCAGTG +
Preference number: 2 (lower is better)
Translates to: RRWPPPACVTGTTSPCCSHVGPY*PGHLAV
Trigger: CACTGCCAAATGGCCTGGGCAATACGGGCCCACGTG...AGAACAGCACGGGGAAGTTGTGCCTGTCACACATGCGGGCGGTGGCCAGCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR-3UTR GCA 90 bp GCAGAGCTTGCAGCCGCTGCAGGCTGGGGTGCACGTTTTCCTCCAGCCACTCCTGTGTGGGCAAGACACTaGTGGGCCAGAGGGCACGAC +
Preference number: 2 (lower is better)
Translates to: AELAAAAGWGARFPPATPVWARH*WARGHD
Trigger: GTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACAC...AGGAGTGGCTGGAGGAAAACGTGCACCCCAGCCTGCAGCGGCTGCAAGCTCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
3UTR-3UTR CCA 90 bp CGCTGCGGGCTGGATGTGCTGAACCATGACCGGGTGGATGAGCTTCCGCTGGCGACGTGGTTCCTGAGGTaGTGCTCAACAGGGGGCACG +
Preference number: 2 (lower is better)
Translates to: RCGLDVLNHDRVDELPLATWFLR*CSTGGT
Trigger: CGTGCCCCCTGTTGAGCACCACCTCAGGAACCACGT...CGCCAGCGGAAGCTCATCCACCCGGTCATGGTTCAGCACATCCAGCCCGCAGCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR CAA 90 bp GCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACTaGTGTGACAAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGC +
Preference number: 2 (lower is better)
Translates to: ALQQRIHRAAQMEAD*CDKGKDVAAREGAG
Trigger: GCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTCACACAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
ENST00000583354.5
3UTR-3UTR TCA 90 bp TTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACTTGTGTGCTTGCTGCAAGAGGCTaGCGGCCAGAGGGCAGGAGG +
Preference number: 2 (lower is better)
Translates to: LPSSSASTELRRWRLTCVLAARG*RPEGRR
Trigger: CCTCCTGCCCTCTGGCCGTCAGCCTCTTGCAGCAAG...CACACAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
3UTR-3UTR TCA 90 bp TGCGGGCTGGATGTGCTGAACCATGACCGGGTGGATGAGCTTCCGCTGGCGGTGCATCAAATCCTCCCATaGGGCCTGCAGGCACCAGCG +
Preference number: 2 (lower is better)
Translates to: CGLDVLNHDRVDELPLAVHQILP*GLQAPA
Trigger: CGCTGGTGCCTGCAGGCCTCATGGGAGGATTTGATG...CACCGCCAGCGGAAGCTCATCCACCCGGTCATGGTTCAGCACATCCAGCCCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578616.5
3UTR-3UTR TCA 90 bp AAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACAGGGTCCATCAAATCCTCCCATaGGGCCTGCAGGCACCAGCG +
Preference number: 2 (lower is better)
Translates to: KGKDVAAREGAGPLPNRVHQILP*GLQAPA
Trigger: CGCTGGTGCCTGCAGGCCTCATGGGAGGATTTGATG...GACCCTGTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
3UTR-3UTR GCA 90 bp GCTGGGGTGCACGTTTTCCTCCAGCCACTCCTCCACGGCATCCGGGTAGAAAGCCAGGAGGCTGAGCGCTaGGGGCTGGATGTGCTGAAC +
Preference number: 2 (lower is better)
Translates to: AGVHVFLQPLLHGIRVESQEAER*GLDVLN
Trigger: GTTCAGCACATCCAGCCCGCAGCGCTCAGCCTCCTG...GCTTTCTACCCGGATGCCGTGGAGGAGTGGCTGGAGGAAAACGTGCACCCCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
3UTR CAA 90 bp GAGCTGCGCAGATGGAGGCTGACTTGTGTGACAAGGGCAAGGATGTaGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACAGGGTCCGTT +
Preference number: 2 (lower is better)
Translates to: ELRRWRLTCVTRARM*LPGKEPAPSLTGSV
Trigger: AACGGACCCTGTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTCACACAAGTCAGCCTCCATCTGCGCAGCTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
ENST00000583354.5
3UTR-3UTR GCA 90 bp CATGAGGAGGACCTTGCCGTGCACATCCAGGTCGGCCGTGTAGTCCCAGAGCACGTGCTGTTCTGCTCTTaGTGTAGCCACCGGCGCGAG +
Preference number: 2 (lower is better)
Translates to: HEEDLAVHIQVGRVVPEHVLFCS*CSHRRE
Trigger: CTCGCGCCGGTGGCTACAGCAAGAGCAGAACAGCAC...GTGCTCTGGGACTACACGGCCGACCTGGATGTGCACGGCAAGGTCCTCCTCATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR-3UTR GCA 90 bp CGATGTGCAGCCGCTGGGCGCCTGGGTGTAGCTCCAGGACCTGGTCAATCATGGTGGGCGAAGGCCGTGTaGTTCAGCACAAACTCCATG +
Preference number: 2 (lower is better)
Translates to: RCAAAGRLGVAPGPGQSWWAKAV*FSTNSM
Trigger: CATGGAGTTTGTGCTGAAGCACACGGCCTTCGCCCA...CCATGATTGACCAGGTCCTGGAGCTACACCCAGGCGCCCAGCGGCTGCACATCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
3UTR-3UTR CCA 90 bp GTGACAAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACACTGCAGGCACCAGCGTaGACGAATCTCCGACTTGGT +
Preference number: 2 (lower is better)
Translates to: VTRARMLLPGKEPAPSLTLQAPA*TNLRLG
Trigger: ACCAAGTCGGAGATTCGTCCACGCTGGTGCCTGCAG...TGTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
3UTR-3UTR CCA 90 bp AATCTCCGACTTGGTGTTCATGGAAATGCTTGCTGCAAGAGGCTGACGGCCAGATGGCGGATGGGGCCGTaGGCAAGGGACACGGCCGCG +
Preference number: 2 (lower is better)
Translates to: NLRLGVHGNACCKRLTARWRMGP*ARDTAA
Trigger: CGCGGCCGTGTCCCTTGCCCACGGCCCCATCCGCCA...TCTGGCCGTCAGCCTCTTGCAGCAAGCATTTCCATGAACACCAAGTCGGAGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583354.5
3UTR-3UTR TCA 90 bp ATGTCGTCCCACACCAGGGGTGTCACGCTGGGGCGCCGGGCCTTCACGCCGCTGGATGCAAGATCTCTTTaGTTTCAGAGGGGCTGTAAT +
Preference number: 2 (lower is better)
Translates to: MSSHTRGVTLGRRAFTPLDARSL*FQRGCN
Trigger: ATTACAGCCCCTCTGAAATCAAAGAGATCTTGCATC...CAGCGGCGTGAAGGCCCGGCGCCCCAGCGTGACACCCCTGGTGTGGGACGACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000582315.5
3UTR-3UTR GCA 90 bp TCACGCCGCTGGCCACCGCCCGCATGTGTGACAGGCACAACTTCCCCGTGCTGTCGGGTCTCCCTGTGCTaGTTCCTTCTGTGTTTTCTA +
Preference number: 2 (lower is better)
Translates to: SRRWPPPACVTGTTSPCCRVSLC*FLLCFL
Trigger: TAGAAAACACAGAAGGAAGCAGCACAGGGAGACCCG...ACAGCACGGGGAAGTTGTGCCTGTCACACATGCGGGCGGTGGCCAGCGGCGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR-3UTR GCA 90 bp CAGGAGGCTGAGCGCTGCGGGCTGGATGTGCTGAACCATGACCGGGTGGATGAGCATGGAAATGCTTGCTaGAAGAGGCTGACGGCCAGA +
Preference number: 2 (lower is better)
Translates to: QEAERCGLDVLNHDRVDEHGNAC*KRLTAR
Trigger: TCTGGCCGTCAGCCTCTTGCAGCAAGCATTTCCATG...CTCATCCACCCGGTCATGGTTCAGCACATCCAGCCCGCAGCGCTCAGCCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578616.5
3UTR-3UTR GCA 90 bp AAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACAGGGTCCATGGAAATGCTTGCTaGAAGAGGCTGACGGCCAGA +
Preference number: 2 (lower is better)
Translates to: KGKDVAAREGAGPLPNRVHGNAC*KRLTAR
Trigger: TCTGGCCGTCAGCCTCTTGCAGCAAGCATTTCCATG...GACCCTGTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
3UTR-3UTR GCA 90 bp GTGCTGTTCTGCTCTTGCTGTAGCCACCGGCGCGAGGCCTCCCCCTCTCCGAGGATGTGTCCAAATGTCTaGACCAAGGGAATCACCTCC +
Preference number: 2 (lower is better)
Translates to: VLFCSCCSHRREASPSPRMCPNV*TKGITS
Trigger: GGAGGTGATTCCCTTGGTGCAGACATTTGGACACAT...CCTCGGAGAGGGGGAGGCCTCGCGCCGGTGGCTACAGCAAGAGCAGAACAGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582315.5
3UTR-3UTR CCA 90 bp CACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTTTTCGGCACGACGCCCACGTaGGCCCGTATTGCCCAGGCC +
Preference number: 2 (lower is better)
Translates to: HTCRSQSGSPCAASFCVFGTTPT*ARIAQA
Trigger: GGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCC...GAAAACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
3UTR-3UTR CCA 90 bp CTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTGTTGCCCTCACAGAGCTGCGCAGATaGAGGCTGACTTGTGTGACA +
Preference number: 2 (lower is better)
Translates to: LPLAVVGAEPASDIPVALTELRR*RLTCVT
Trigger: TGTCACACAAGTCAGCCTCCATCTGCGCAGCTCTGT...GAGGGCAACAGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
3UTR-3UTR CCA 90 bp AATCTCCGACTTGGTGTTCATGGAAATGCTTGCTGCAAGAGGCTGACGGCCAGAGTCACGGGTGGCGGATaGGGCCGTGGGCAAGGGACA +
Preference number: 2 (lower is better)
Translates to: NLRLGVHGNACCKRLTARVTGGG*GRGQGT
Trigger: TGTCCCTTGCCCACGGCCCCATCCGCCACCCGTGAC...TCTGGCCGTCAGCCTCTTGCAGCAAGCATTTCCATGAACACCAAGTCGGAGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583354.5
3UTR-3UTR GCA 90 bp CTTGCCGTGCACATCCAGGTCGGCCGTGTAGTCCCAGAGCACCGGCTCCACCAGAATCAGTGTCACACATaGAGATCACAAAGCGGGTCT +
Preference number: 2 (lower is better)
Translates to: LAVHIQVGRVVPEHRLHQNQCHT*RSQSGS
Trigger: AGACCCGCTTTGTGATCTGCATGTGTGACACTGATT...CTGGTGGAGCCGGTGCTCTGGGACTACACGGCCGACCTGGATGTGCACGGCAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR-3UTR CCA 90 bp CCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTGTTGCCCTCCAGCCGACTTGGTGTTCATaGAAATGCTTGCTGCAAGAG +
Preference number: 2 (lower is better)
Translates to: PLAVVGAEPASDIPVALQPTWCS*KCLLQE
Trigger: CTCTTGCAGCAAGCATTTCCATGAACACCAAGTCGG...CTGGAGGGCAACAGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578616.5
3UTR-3UTR TCA 90 bp TCCGAGGTAATAGACCTCATCACACCCGATGTGCAGCCGCTGGGCGCCTGGGTGGATGCAAGATCTCTTTaGTTTCAGAGGGGCTGTAGG +
Preference number: 2 (lower is better)
Translates to: SEVIDLITPDVQPLGAWVDARSL*FQRGCR
Trigger: CCTACAGCCCCTCTGAAATCAAAGAGATCTTGCATC...CACCCAGGCGCCCAGCGGCTGCACATCGGGTGTGATGAGGTCTATTACCTCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581482.5
3UTR-3UTR GCA 90 bp TCCGAGGTAATAGACCTCATCACACCCGATGTGCAGCCGCTGGGCGCCTGGGTGATGTGTCCAAATGTCTaGACCAAGGGAATCACCTCC +
Preference number: 2 (lower is better)
Translates to: SEVIDLITPDVQPLGAWVMCPNV*TKGITS
Trigger: GGAGGTGATTCCCTTGGTGCAGACATTTGGACACAT...CACCCAGGCGCCCAGCGGCTGCACATCGGGTGTGATGAGGTCTATTACCTCGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581482.5
ENST00000582315.5
3UTR-3UTR GCA 90 bp ATACCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACTGGTGTTCATGGAAATaGTTGCTGCAAGAGGCTGAC +
Preference number: 2 (lower is better)
Translates to: IPVALQQRIHRAAQMEADWCSWK*LLQEAD
Trigger: GTCAGCCTCTTGCAGCAAGCATTTCCATGAACACCA...GTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGGTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
3UTR-3UTR CCA 90 bp CTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTGTTGCCCTCGACGAATCTCCGACTTaGTGTTCATGGAAATGCTTG +
Preference number: 2 (lower is better)
Translates to: LPLAVVGAEPASDIPVALDESPT*CSWKCL
Trigger: CAAGCATTTCCATGAACACCAAGTCGGAGATTCGTC...GAGGGCAACAGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578616.5
3UTR-3UTR GCA 90 bp AAATCCTCCCATGAGGCCTGCAGGCACCAGCGTGGACGAATCTCCGACTTGGTGTGGTGTTCATGGAAATaGTTGCTGCAAGAGGCTGAC +
Preference number: 2 (lower is better)
Translates to: KSSHEACRHQRGRISDLVWCSWK*LLQEAD
Trigger: GTCAGCCTCTTGCAGCAAGCATTTCCATGAACACCA...CACCAAGTCGGAGATTCGTCCACGCTGGTGCCTGCAGGCCTCATGGGAGGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
3UTR-3UTR GCA 90 bp GTAGCCACCGGCGCGAGGCCTCCCCCTCTCCGAGGTAATAGACCTCATCACACCTTGAGTCCAGCCAGATaGAAGATCTCTTTGATTTCA +
Preference number: 2 (lower is better)
Translates to: VATGARPPPLRGNRPHHTLSPAR*KISLIS
Trigger: TGAAATCAAAGAGATCTTGCATCTGGCTGGACTCAA...GGTGTGATGAGGTCTATTACCTCGGAGAGGGGGAGGCCTCGCGCCGGTGGCTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581482.5
ENST00000582315.5
3UTR-3UTR GCA 90 bp TCCGAGGTAATAGACCTCATCACACCCGATGTGCAGCCGCTGGGCGCCTGGGTGTTGAGTCCAGCCAGATaGAAGATCTCTTTGATTTCA +
Preference number: 2 (lower is better)
Translates to: SEVIDLITPDVQPLGAWVLSPAR*KISLIS
Trigger: TGAAATCAAAGAGATCTTGCATCTGGCTGGACTCAA...CACCCAGGCGCCCAGCGGCTGCACATCGGGTGTGATGAGGTCTATTACCTCGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581482.5
ENST00000582315.5
3UTR-3UTR GCA 90 bp TTTTTCCAGGCTGGAAATCCCGAGAAGGTTCTCCACTTTCGCTTTAACATCTTCTCCTCCCATGAGGCCTaGAGGCACCAGCGTGGACGA +
Preference number: 2 (lower is better)
Translates to: FFQAGNPEKVLHFRFNIFSSHEA*RHQRGR
Trigger: TCGTCCACGCTGGTGCCTGCAGGCCTCATGGGAGGA...GAAGATGTTAAAGCGAAAGTGGAGAACCTTCTCGGGATTTCCAGCCTGGAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
3UTR CAA 90 bp TCCATGTGTCCAAATGTCTGCACCAAGGGAATCACCTCCAGCTCATaGAGTCCAGCCAGATGCAAGATCTCTTTGATTTCAGAGGGGCTG +
Preference number: 2 (lower is better)
Translates to: SMCPNVCTKGITSSS*SPARCKISLISEGL
Trigger: CAGCCCCTCTGAAATCAAAGAGATCTTGCATCTGGCTGGACTCAATGAGCTGGAGGTGATTCCCTTGGTGCAGACATTTGGACACATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581482.5
ENST00000582315.5
3UTR-3UTR GCA 90 bp GTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTTTAATCAGTGTCACACATaGAGATCACAAAGCGGGTCT +
Preference number: 2 (lower is better)
Translates to: VTHADHKAGLPVLLPSVFNQCHT*RSQSGS
Trigger: AGACCCGCTTTGTGATCTGCATGTGTGACACTGATT...AAACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
3UTR-3UTR GCA 90 bp GGAAATCCCGAGAAGGTTCTCCACTTTCGCTTTAACATCTTCATCAAATCCTCCGTTCATGGAAATGCTTaGTGCAAGAGGCTGACGGCC +
Preference number: 2 (lower is better)
Translates to: GNPEKVLHFRFNIFIKSSVHGNA*CKRLTA
Trigger: GGCCGTCAGCCTCTTGCAGCAAGCATTTCCATGAAC...GGAGGATTTGATGAAGATGTTAAAGCGAAAGTGGAGAACCTTCTCGGGATTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
3UTR-3UTR GCA 90 bp GGAAATCCCGAGAAGGTTCTCCACTTTCGCTTTAACATCTTCATCAAATCCTCCGGCCATTTTTCTTTCTaGATCAGCACCACGCAGTCG +
Preference number: 2 (lower is better)
Translates to: GNPEKVLHFRFNIFIKSSGHFSF*ISTTQS
Trigger: CGACTGCGTGGTGCTGATGCAGAAAGAAAAATGGCC...GGAGGATTTGATGAAGATGTTAAAGCGAAAGTGGAGAACCTTCTCGGGATTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000583354.5
3UTR GCA 72 bp CCTCCGGCCGCGTCCCCGTCCCTGGGCCGCCGCGCCTaGGGGTCCCGCTCTCCGCGCGTCTCGGCCATTTTT +
Preference number: 3 (lower is better)
Translates to: PPAASPSLGRRA*GSRSPRVSAIF
Trigger: AAAAATGGCCGAGACGCGCGGAGAGCGGGACCCGCAGGCGCGGCGGCCCAGGGACGGGGACGCGGCCGGAGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
3UTR CCA 72 bp CTCGGAGCATGTCGTCCCACACCAGGGGTGTCACGCTaGGGCGCCGGGCCTTCACGCCGCTGGCCACCGCCC +
Preference number: 3 (lower is better)
Translates to: LGACRPTPGVSR*GAGPSRRWPPP
Trigger: GGGCGGTGGCCAGCGGCGTGAAGGCCCGGCGCCCCAGCGTGACACCCCTGGTGTGGGACGACATGCTCCGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR CCA 72 bp CATCTTCATCAAATCCTCCGGCCGCGTCCCCGTCCCTaGGCCGCCGCGCCTGCGGGTCCCGCTCTCCGCGCG +
Preference number: 3 (lower is better)
Translates to: HLHQILRPRPRP*AAAPAGPALRA
Trigger: CGCGCGGAGAGCGGGACCCGCAGGCGCGGCGGCCCAGGGACGGGGACGCGGCCGGAGGATTTGATGAAGATG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
3UTR TCA 72 bp CAGGGGGCACGGCCTGGCTGGGCCCCGTGGCACCCTTaGAGGCACTGGCTGCCCACAGCTGCGGAAAGCCGC +
Preference number: 3 (lower is better)
Translates to: QGARPGWAPWHP*RHWLPTAAESR
Trigger: GCGGCTTTCCGCAGCTGTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGCCCAGCCAGGCCGTGCCCCCTG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR CCA 72 bp GGGGTGTCACGCTGGGGCGCCGGGCCTTCACGCCGCTaGCCACCGCCCGCATGTGTGACAGGCACAACTTCC +
Preference number: 3 (lower is better)
Translates to: GVSRWGAGPSRR*PPPACVTGTTS
Trigger: GGAAGTTGTGCCTGTCACACATGCGGGCGGTGGCCAGCGGCGTGAAGGCCCGGCGCCCCAGCGTGACACCCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR CCA 72 bp CCCGCCACCTGCAGCCACTGCACGTGGTTCCTGAGGTaGTGCTCAACAGGGGGCACGGCCTGGCTGGGCCCC +
Preference number: 3 (lower is better)
Translates to: PATCSHCTWFLR*CSTGGTAWLGP
Trigger: GGGGCCCAGCCAGGCCGTGCCCCCTGTTGAGCACCACCTCAGGAACCACGTGCAGTGGCTGCAGGTGGCGGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR TCA 72 bp CGCTGCCCGCCACCTGCAGCCACTGCACGTGGTTCCTaGGGTGGTGCTCAACAGGGGGCACGGCCTGGCTGG +
Preference number: 3 (lower is better)
Translates to: RCPPPAATARGS*GGAQQGARPGW
Trigger: CCAGCCAGGCCGTGCCCCCTGTTGAGCACCACCTCAGGAACCACGTGCAGTGGCTGCAGGTGGCGGGCAGCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR GCA 72 bp GCCACCTGCAGCCACTGCACGTGGTTCCTGAGGTGGTaGTCAACAGGGGGCACGGCCTGGCTGGGCCCCGTG +
Preference number: 3 (lower is better)
Translates to: ATCSHCTWFLRW*STGGTAWLGPV
Trigger: CACGGGGCCCAGCCAGGCCGTGCCCCCTGTTGAGCACCACCTCAGGAACCACGTGCAGTGGCTGCAGGTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR GCA 72 bp GAGTCCGTGGGCCCGCTGCCCGCCACCTGCAGCCACTaGACGTGGTTCCTGAGGTGGTGCTCAACAGGGGGC +
Preference number: 3 (lower is better)
Translates to: ESVGPLPATCSH*TWFLRWCSTGG
Trigger: GCCCCCTGTTGAGCACCACCTCAGGAACCACGTGCAGTGGCTGCAGGTGGCGGGCAGCGGGCCCACGGACTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR TCA 72 bp GTACCTCTGCCAGCCGGTCAGGATGATGCCCTGCAGTaGGTCCGTGGGCCCGCTGCCCGCCACCTGCAGCCA +
Preference number: 3 (lower is better)
Translates to: VPLPAGQDDALQ*VRGPAARHLQP
Trigger: TGGCTGCAGGTGGCGGGCAGCGGGCCCACGGACTCACTGCAGGGCATCATCCTGACCGGCTGGCAGAGGTAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR GCA 72 bp TGGTCGTACCTCTGCCAGCCGGTCAGGATGATGCCCTaGAGTGAGTCCGTGGGCCCGCTGCCCGCCACCTGC +
Preference number: 3 (lower is better)
Translates to: WSYLCQPVRMMP*SESVGPLPATC
Trigger: GCAGGTGGCGGGCAGCGGGCCCACGGACTCACTGCAGGGCATCATCCTGACCGGCTGGCAGAGGTACGACCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR CCA 72 bp GGGCGCCTGGGTGTAGCTCCAGGACCTGGTCAATCATaGCGCCCACCAGCGCCAGGGACTCTGCCTCGTGGG +
Preference number: 3 (lower is better)
Translates to: GRLGVAPGPGQS*RPPAPGTLPRG
Trigger: CCCACGAGGCAGAGTCCCTGGCGCTGGTGGGCGCCATGATTGACCAGGTCCTGGAGCTACACCCAGGCGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
3UTR CCA 72 bp TGCAGCCGCTGGGCGCCTGGGTGTAGCTCCAGGACCTaGTCAATCATGGCGCCCACCAGCGCCAGGGACTCT +
Preference number: 3 (lower is better)
Translates to: CSRWAPGCSSRT*SIMAPTSARDS
Trigger: AGAGTCCCTGGCGCTGGTGGGCGCCATGATTGACCAGGTCCTGGAGCTACACCCAGGCGCCCAGCGGCTGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
3UTR TCA 72 bp CCGGGCCTTCACGCCGCTGGCCACCGCCCGCATGTGTaGCAGGCACAACTTCCCCGTGCTGTTCTGCTCTTG +
Preference number: 3 (lower is better)
Translates to: PGLHAAGHRPHV*QAQLPRAVLLL
Trigger: CAAGAGCAGAACAGCACGGGGAAGTTGTGCCTGTCACACATGCGGGCGGTGGCCAGCGGCGTGAAGGCCCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR TCA 72 bp CAGAGTAGTGGTCGTACCTCTGCCAGCCGGTCAGGATaGTGCCCTGCAGTGAGTCCGTGGGCCCGCTGCCCG +
Preference number: 3 (lower is better)
Translates to: QSSGRTSASRSG*CPAVSPWARCP
Trigger: CGGGCAGCGGGCCCACGGACTCACTGCAGGGCATCATCCTGACCGGCTGGCAGAGGTACGACCACTACTCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR GCA 72 bp CCCGTGGCACCCTTGAAGGCACTGGCTGCCCACAGCTaGGGAAAGCCGCACCGCCGGTACTTCTGCATGAGG +
Preference number: 3 (lower is better)
Translates to: PVAPLKALAAHS*GKPHRRYFCMR
Trigger: CCTCATGCAGAAGTACCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR-3UTR CAA 90 bp CCCTTGAAGGCACTGGCTGCCCACAGCTGCGGAAAGCCGCACCGCCGGTACTTCCCACGTGGGCCCGTATaGCCCAGGCCATTTGGCAGT +
Preference number: 3 (lower is better)
Translates to: PLKALAAHSCGKPHRRYFPRGPV*PRPFGS
Trigger: ACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGG...GAAGTACCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAGTGCCTTCAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578775.2
3UTR GCA 72 bp ACCTCGCTGAGGTCCTGCAGCAGAGCTTGCAGCCGCTaGAGGCTGGGGTGCACGTTTTCCTCCAGCCACTCC +
Preference number: 3 (lower is better)
Translates to: TSLRSCSRACSR*RLGCTFSSSHS
Trigger: GGAGTGGCTGGAGGAAAACGTGCACCCCAGCCTGCAGCGGCTGCAAGCTCTGCTGCAGGACCTCAGCGAGGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
3UTR GCA 72 bp TGTGACAGGCACAACTTCCCCGTGCTGTTCTGCTCTTaGTGTAGCCACCGGCGCGAGGCCTCCCCCTCTCCG +
Preference number: 3 (lower is better)
Translates to: CDRHNFPVLFCS*CSHRREASPSP
Trigger: CGGAGAGGGGGAGGCCTCGCGCCGGTGGCTACAGCAAGAGCAGAACAGCACGGGGAAGTTGTGCCTGTCACA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR GCA 72 bp CGCATGTGTGACAGGCACAACTTCCCCGTGCTGTTCTaGTCTTGCTGTAGCCACCGGCGCGAGGCCTCCCCC +
Preference number: 3 (lower is better)
Translates to: RMCDRHNFPVLF*SCCSHRREASP
Trigger: GGGGGAGGCCTCGCGCCGGTGGCTACAGCAAGAGCAGAACAGCACGGGGAAGTTGTGCCTGTCACACATGCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR GCA 72 bp CCACCGCCCGCATGTGTGACAGGCACAACTTCCCCGTaGTGTTCTGCTCTTGCTGTAGCCACCGGCGCGAGG +
Preference number: 3 (lower is better)
Translates to: PPPACVTGTTSP*CSALAVATGAR
Trigger: CCTCGCGCCGGTGGCTACAGCAAGAGCAGAACAGCACGGGGAAGTTGTGCCTGTCACACATGCGGGCGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR GCA 72 bp GCCCACAGCTGCGGAAAGCCGCACCGCCGGTACTTCTaGATGAGGAGGACCTTGCCGTGCACATCCAGGTCG +
Preference number: 3 (lower is better)
Translates to: AHSCGKPHRRYF*MRRTLPCTSRS
Trigger: CGACCTGGATGTGCACGGCAAGGTCCTCCTCATGCAGAAGTACCGGCGGTGCGGCTTTCCGCAGCTGTGGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR CCA 72 bp CAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTaGGCCCGTATTGCCCAGGCCATTTGGCAGTGCAGA +
Preference number: 3 (lower is better)
Translates to: QDTAGPEGTTPT*ARIAQAIWQCR
Trigger: TCTGCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
3UTR-3UTR CAA 90 bp AGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACAGGGTCCCCAGTGACATACCTGTaGCCCTCCAGCAGCGCATCC +
Preference number: 3 (lower is better)
Translates to: RARMLLPGKEPAPSLTGSPVTYL*PSSSAS
Trigger: GGATGCGCTGCTGGAGGGCAACAGGTATGTCACTGG...GGACCCTGTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
ENST00000583354.5
3UTR CCA 72 bp TTCAGGGTGCAGGGGAAGGAGCCCACCTCCCGCAGGTaGGCGAAGGCCGTGTGCTTCAGCACAAACTCCATG +
Preference number: 3 (lower is better)
Translates to: FRVQGKEPTSRR*AKAVCFSTNSM
Trigger: CATGGAGTTTGTGCTGAAGCACACGGCCTTCGCCCACCTGCGGGAGGTGGGCTCCTTCCCCTGCACCCTGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
3UTR-3UTR CAA 90 bp ACCCTTGAAGGCACTGGCTGCCCACAGCTGCGGAAAGCCGCACCGCCGGTACTTTGCATGAGGAGGACCTaGCCGTGCACATCCAGGTCG +
Preference number: 3 (lower is better)
Translates to: TLEGTGCPQLRKAAPPVLCMRRT*PCTSRS
Trigger: CGACCTGGATGTGCACGGCAAGGTCCTCCTCATGCA...AAGTACCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAGTGCCTTCAAGGGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR-3UTR CAA 90 bp GAACCAGCCAGTGACATACCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGACAAGGGCAAGGATGTaGCTGCCAGGGAAGGAGCCG +
Preference number: 3 (lower is better)
Translates to: EPASDIPVALQQRIHRAATRARM*LPGKEP
Trigger: CGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGT...CGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGGTATGTCACTGGCTGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
ENST00000583354.5
3UTR GCA 72 bp AAGGAGCCCACCTCCCGCAGGTGGGCGAAGGCCGTGTaGTTCAGCACAAACTCCATGTGTCCAAATGTCTGC +
Preference number: 3 (lower is better)
Translates to: KEPTSRRWAKAV*FSTNSMCPNVC
Trigger: GCAGACATTTGGACACATGGAGTTTGTGCTGAAGCACACGGCCTTCGCCCACCTGCGGGAGGTGGGCTCCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
3UTR-3UTR CAA 90 bp CTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTGTTGCCCTCCAGATGGAGGCTGACTaGTGTGACAAGGGCAAGGAT +
Preference number: 3 (lower is better)
Translates to: LPLAVVGAEPASDIPVALQMEAD*CDKGKD
Trigger: ATCCTTGCCCTTGTCACACAAGTCAGCCTCCATCTG...GAGGGCAACAGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
3UTR-3UTR CAA 90 bp AAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACAGGGTCGGACGAATCTCCGACTaGGTGTTCATGGAAATGCTT +
Preference number: 3 (lower is better)
Translates to: KGKDVAAREGAGPLPNRVGRISD*VFMEML
Trigger: AAGCATTTCCATGAACACCAAGTCGGAGATTCGTCC...GACCCTGTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
3UTR CCA 72 bp GGCACCAGCGTGGACGAATCTCCGACTTGGTGTTCATaGAAATGCTTGCTGCAAGAGGCTGACGGCCAGAGG +
Preference number: 3 (lower is better)
Translates to: GTSVDESPTWCS*KCLLQEADGQR
Trigger: CCTCTGGCCGTCAGCCTCTTGCAGCAAGCATTTCCATGAACACCAAGTCGGAGATTCGTCCACGCTGGTGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
3UTR CCA 72 bp TTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATaGAGGCTGACTTGTGTGACAAGGGCAAGGATGTTG +
Preference number: 3 (lower is better)
Translates to: LPSSSASTELRR*RLTCVTRARML
Trigger: CAACATCCTTGCCCTTGTCACACAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
ENST00000583354.5
3UTR GCA 72 bp TGGACGAATCTCCGACTTGGTGTTCATGGAAATGCTTaGTGCAAGAGGCTGACGGCCAGAGGGCAGGAGGGA +
Preference number: 3 (lower is better)
Translates to: WTNLRLGVHGNA*CKRLTARGQEG
Trigger: TCCCTCCTGCCCTCTGGCCGTCAGCCTCTTGCAGCAAGCATTTCCATGAACACCAAGTCGGAGATTCGTCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
3UTR GCA 72 bp AGCGTGGACGAATCTCCGACTTGGTGTTCATGGAAATaGTTGCTGCAAGAGGCTGACGGCCAGAGGGCAGGA +
Preference number: 3 (lower is better)
Translates to: SVDESPTWCSWK*LLQEADGQRAG
Trigger: TCCTGCCCTCTGGCCGTCAGCCTCTTGCAGCAAGCATTTCCATGAACACCAAGTCGGAGATTCGTCCACGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
3UTR CCA 72 bp AGGCCTGCAGGCACCAGCGTGGACGAATCTCCGACTTaGTGTTCATGGAAATGCTTGCTGCAAGAGGCTGAC +
Preference number: 3 (lower is better)
Translates to: RPAGTSVDESPT*CSWKCLLQEAD
Trigger: GTCAGCCTCTTGCAGCAAGCATTTCCATGAACACCAAGTCGGAGATTCGTCCACGCTGGTGCCTGCAGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
3UTR-3UTR CAA 90 bp TTTTTCCAGGCTGGAAATCCCGAGAAGGTTCTCCACTTTCGCTTTAACATCTTCACAAGGGCAAGGATGTaGCTGCCAGGGAAGGAGCCG +
Preference number: 3 (lower is better)
Translates to: FFQAGNPEKVLHFRFNIFTRARM*LPGKEP
Trigger: CGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGT...GAAGATGTTAAAGCGAAAGTGGAGAACCTTCTCGGGATTTCCAGCCTGGAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
ENST00000583354.5
3UTR GCA 72 bp TTCCACTCTTTATTTCCAAAGAATCAGTGTCACACATaGAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCC +
Preference number: 3 (lower is better)
Translates to: FHSLFPKNQCHT*RSQSGSPCAAS
Trigger: GGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAATAAAGAGTGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR TCA 90 bp CATCAAATCCTCCGGCCGCGTCCCCGTCCCTGGGCCGCCGCGCCTGCGGGTCCCGATGATGCCCTGCAGTaGGTCCGTGGGCCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: HQILRPRPRPWAAAPAGPDDALQ*VRGPAA
Trigger: GGCAGCGGGCCCACGGACTCACTGCAGGGCATCATC...GGGACCCGCAGGCGCGGCGGCCCAGGGACGGGGACGCGGCCGGAGGATTTGATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp GCATGTCGTCCCACACCAGGGGTGTCACGCTGGGGCGCCGGGCCTTCACGCCGCCCAGGGGTGTCACGCTaGGGCGCCGGGCCTTCACGC +
Preference number: 4 (lower is better)
Translates to: ACRPTPGVSRWGAGPSRRPGVSR*GAGPSR
Trigger: GCGTGAAGGCCCGGCGCCCCAGCGTGACACCCCTGG...GCGGCGTGAAGGCCCGGCGCCCCAGCGTGACACCCCTGGTGTGGGACGACATGC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR GCA 90 bp CGTCCCACACCAGGGGTGTCACGCTGGGGCGCCGGGCCTTCACGCCGCTGGCCACTCTCCCCCAGGGGCTaGCCAGGGCCCTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: RPTPGVSRWGAGPSRRWPLSPRG*PGPSGT
Trigger: AGTTCCTGAGGGCCCTGGGCAGCCCCTGGGGGAGAG...TGGCCAGCGGCGTGAAGGCCCGGCGCCCCAGCGTGACACCCCTGGTGTGGGACG
73% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS-3UTR CCA 90 bp GCACCGGCTCCACCAGCTGCGGCACCCCGGACGCTGCGAGCTGGTCCTCAGGCAGGGCCTTCACGCCGCTaGCCACCGCCCGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: APAPPAAAPRTLRAGPQAGPSRR*PPPACV
Trigger: CACACATGCGGGCGGTGGCCAGCGGCGTGAAGGCCC...TGCCTGAGGACCAGCTCGCAGCGTCCGGGGTGCCGCAGCTGGTGGAGCCGGTGC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR CCA 90 bp CTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCCCAGGGGTGTCACGCTaGGGCGCCGGGCCTTCACGC +
Preference number: 4 (lower is better)
Translates to: LSVGKTLLGQRARRPRGPPGVSR*GAGPSR
Trigger: GCGTGAAGGCCCGGCGCCCCAGCGTGACACCCCTGG...GGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp CCAGAGCACCGGCTCCACCAGCTGCGGCACCCCGGACGCTGCGAGCTGGTCCTCCCGGACGCTGCGAGCTaGTCCTCAGGCAGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: PEHRLHQLRHPGRCELVLPDAAS*SSGRSR
Trigger: CCGAGACCTGCCTGAGGACCAGCTCGCAGCGTCCGG...GAGGACCAGCTCGCAGCGTCCGGGGTGCCGCAGCTGGTGGAGCCGGTGCTCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
3UTR CAA 72 bp ACAGGGGGCACGGCCTGGCTGGGCCCCGTGGCACCCTaGAAGGCACTGGCTGCCCACAGCTGCGGAAAGCCG +
Preference number: 4 (lower is better)
Translates to: TGGTAWLGPVAP*KALAAHSCGKP
Trigger: CGGCTTTCCGCAGCTGTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGCCCAGCCAGGCCGTGCCCCCTGT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS-3UTR GCA 90 bp ACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTCGCACTCGCGTCCCTaGGCCGTGCCTGCCTCGCGC +
Preference number: 4 (lower is better)
Translates to: TAGPEGTTPTWARIAQAISHSRP*AVPASR
Trigger: GCGCGAGGCAGGCACGGCGCAGGGACGCGAGTGCGA...AATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGT
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327949.15
CDS-3UTR GCA 90 bp AGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTAACCGGCTCCACCAGCTaGGGCACCCCGGACGCTGCG +
Preference number: 4 (lower is better)
Translates to: SVGKTLLGQRARRPRGPVTGSTS*GTPDAA
Trigger: CGCAGCGTCCGGGGTGCCGCAGCTGGTGGAGCCGGT...TACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GGGCCGCCGCGCCTGCGGGTCCCGCTCTCCGCGCGTCTCGGCCATTTTTCTTTCCCTGAGCCCCACACCTaGTCGGCCAGGTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: GPPRLRVPLSARLGHFSFPEPHT*SARWAG
Trigger: TCCTGCCCACCTGGCCGAGCAGGTGTGGGGCTCAGG...GAAAGAAAAATGGCCGAGACGCGCGGAGAGCGGGACCCGCAGGCGCGGCGGCCC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000583354.5
CDS-3UTR CCA 90 bp GGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCAGAGCCCAGGGGTGTCACGCTaGGGCGCCGGGCCTTCACGC +
Preference number: 4 (lower is better)
Translates to: GHDAHVGPYCPGHLAVQSPGVSR*GAGPSR
Trigger: GCGTGAAGGCCCGGCGCCCCAGCGTGACACCCCTGG...GCTCTGCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp CACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATGCCCCGTGGCACCCTTaGAGGCACTGGCTGCCCACA +
Preference number: 4 (lower is better)
Translates to: HCWARGHDAHVGPYCPGHAPWHP*RHWLPT
Trigger: TGTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGC...ATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp GTGGCACCCTTGAAGGCACTGGCTGCCCACAGCTGCGGAAAGCCGCACCGCCGGGCCCCGTGGCACCCTTaGAGGCACTGGCTGCCCACA +
Preference number: 4 (lower is better)
Translates to: VAPLKALAAHSCGKPHRRAPWHP*RHWLPT
Trigger: TGTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGC...CCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAGTGCCTTCAAGGGTGCCAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR TCA 90 bp CACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATGATGATGCCCTGCAGTaGGTCCGTGGGCCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: HCWARGHDAHVGPYCPGHDDALQ*VRGPAA
Trigger: GGCAGCGGGCCCACGGACTCACTGCAGGGCATCATC...ATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GTGTCACGCTGGGGCGCCGGGCCTTCACGCCGCTGGCCACCGCCCGCATGTGTGGTGCTGTTCTGCTCTTaGTGTAGCCACCGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: VSRWGAGPSRRWPPPACVVLFCS*CSHRRE
Trigger: CTCGCGCCGGTGGCTACAGCAAGAGCAGAACAGCAC...CACACATGCGGGCGGTGGCCAGCGGCGTGAAGGCCCGGCGCCCCAGCGTGACAC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR GCA 90 bp CCCTTGAAGGCACTGGCTGCCCACAGCTGCGGAAAGCCGCACCGCCGGTACTTCACCGGCTCCACCAGCTaGGGCACCCCGGACGCTGCG +
Preference number: 4 (lower is better)
Translates to: PLKALAAHSCGKPHRRYFTGSTS*GTPDAA
Trigger: CGCAGCGTCCGGGGTGCCGCAGCTGGTGGAGCCGGT...GAAGTACCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAGTGCCTTCAAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR GCA 90 bp CGCCGCTGGCCACCGCCCGCATGTGTGACAGGCACAACTTCCCCGTGCTGTTCTACCGGCTCCACCAGCTaGGGCACCCCGGACGCTGCG +
Preference number: 4 (lower is better)
Translates to: RRWPPPACVTGTTSPCCSTGSTS*GTPDAA
Trigger: CGCAGCGTCCGGGGTGCCGCAGCTGGTGGAGCCGGT...AGAACAGCACGGGGAAGTTGTGCCTGTCACACATGCGGGCGGTGGCCAGCGGCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR GCA 90 bp GGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCAGAGCCTGGCTGCCCACAGCTaGGGAAAGCCGCACCGCCGG +
Preference number: 4 (lower is better)
Translates to: GHDAHVGPYCPGHLAVQSLAAHS*GKPHRR
Trigger: CCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAG...GCTCTGCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp AGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTACTGGCTGCCCACAGCTaGGGAAAGCCGCACCGCCGG +
Preference number: 4 (lower is better)
Translates to: SVGKTLLGQRARRPRGPVLAAHS*GKPHRR
Trigger: CCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAG...TACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp AGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCAGGGACGGGACTCCTaGGGGCAGCAGCTCGCACAG +
Preference number: 4 (lower is better)
Translates to: RHCWARGHDAHVGPYCPGQGRDS*GQQLAQ
Trigger: CTGTGCGAGCTGCTGCCCGCAGGAGTCCCGTCCCTG...GCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GGCCGCCGCGCCTGCGGGTCCCGCTCTCCGCGCGTCTCGGCCATTTTTCTTTCTCAGGGACGGGACTCCTaGGGGCAGCAGCTCGCACAG +
Preference number: 4 (lower is better)
Translates to: GRRACGSRSPRVSAIFLSQGRDS*GQQLAQ
Trigger: CTGTGCGAGCTGCTGCCCGCAGGAGTCCCGTCCCTG...AGAAAGAAAAATGGCCGAGACGCGCGGAGAGCGGGACCCGCAGGCGCGGCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR GCA 90 bp ACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCACTCTCCCCCAGGGGCTaGCCAGGGCCCTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: TLLGQRARRPRGPVLPRPLSPRG*PGPSGT
Trigger: AGTTCCTGAGGGCCCTGGGCAGCCCCTGGGGGAGAG...TGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCCTCTCCCCCAGGGGCTaGCCAGGGCCCTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: LSVGKTLLGQRARRPRGPLSPRG*PGPSGT
Trigger: AGTTCCTGAGGGCCCTGGGCAGCCCCTGGGGGAGAG...GGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GGCCGCCGCGCCTGCGGGTCCCGCTCTCCGCGCGTCTCGGCCATTTTTCTTTCTAGGGCAGGAGGGAAGTaGCCCAGTCACGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: GRRACGSRSPRVSAIFLSRAGGK*PSHGWR
Trigger: CCGCCACCCGTGACTGGGGCACTTCCCTCCTGCCCT...AGAAAGAAAAATGGCCGAGACGCGCGGAGAGCGGGACCCGCAGGCGCGGCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583354.5
CDS-3UTR CCA 90 bp GGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCAGCCCAGGGGCCGATaGCCGAGCGCGTCGCACTCG +
Preference number: 4 (lower is better)
Translates to: GPQELSVGKTLLGQRARRQPRGR*PSASHS
Trigger: CGAGTGCGACGCGCTCGGCCATCGGCCCCTGGGCTG...GCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327949.15
CDS-3UTR CCA 90 bp ATGTCGTCCCACACCAGGGGTGTCACGCTGGGGCGCCGGGCCTTCACGCCGCTGGGACCTGGTCAATCATaGCGCCCACCAGCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: MSSHTRGVTLGRRAFTPLGPGQS*RPPAPG
Trigger: CCCTGGCGCTGGTGGGCGCCATGATTGACCAGGTCC...CAGCGGCGTGAAGGCCCGGCGCCCCAGCGTGACACCCCTGGTGTGGGACGACAT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR CCA 90 bp GGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGCCGATGTGCAGCCGCTaGGCGCCTGGGTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: GPEGTTPTWARIAQAIWQPMCSR*APGCSS
Trigger: GGAGCTACACCCAGGCGCCCAGCGGCTGCACATCGG...CTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR CCA 90 bp CACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCAGAGCCCCGGGCCTTCACGCCGCTaGCCACCGCCCGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: HDAHVGPYCPGHLAVQSPGPSRR*PPPACV
Trigger: CACACATGCGGGCGGTGGCCAGCGGCGTGAAGGCCC...GGGGCTCTGCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp TGTAGTCCCAGAGCACCGGCTCCACCAGCTGCGGCACCCCGGACGCTGCGAGCTCCGGACGCTGCGAGCTaGTCCTCAGGCAGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: CSPRAPAPPAAAPRTLRAPDAAS*SSGRSR
Trigger: CCGAGACCTGCCTGAGGACCAGCTCGCAGCGTCCGG...AGCTCGCAGCGTCCGGGGTGCCGCAGCTGGTGGAGCCGGTGCTCTGGGACTACA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR CCA 90 bp CCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCCCTGCAGTGAGTCCGTaGGCCCGCTGCCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: PEGTTPTWARIAQAIWQCPAVSP*ARCPPP
Trigger: AGGTGGCGGGCAGCGGGCCCACGGACTCACTGCAGG...GCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp CAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGGCACGACGCCCACGTaGGCCCGTATTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: QDTAGPEGTTPTWARIAQGTTPT*ARIAQA
Trigger: GGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCC...CTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp CAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCCCGTGGCACCCTTaGAGGCACTGGCTGCCCACA +
Preference number: 4 (lower is better)
Translates to: QDTAGPEGTTPTWARIAQAPWHP*RHWLPT
Trigger: TGTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGC...CTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp CAGGGGAAGGAGCCCACCTCCCGCAGGTGGGCGAAGGCCGTGTGCTTCAGCACAGCCCCGTGGCACCCTTaGAGGCACTGGCTGCCCACA +
Preference number: 4 (lower is better)
Translates to: QGKEPTSRRWAKAVCFSTAPWHP*RHWLPT
Trigger: TGTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGC...TGTGCTGAAGCACACGGCCTTCGCCCACCTGCGGGAGGTGGGCTCCTTCCCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR TCA 90 bp GCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCAGAGCCCTCCCCTCAGGGGTCCTaGGCAACGTCCCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ARRPRGPVLPRPFGSAEPSPQGS*ATSLPG
Trigger: CCCTGGCAGGGACGTTGCTCAGGACCCCTGAGGGGA...GGGCTCTGCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTCATCACACCCGATGTaGAGCCGCTGGGCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GPEGTTPTWARIAQAIWQSSHPM*SRWAPG
Trigger: CCCAGGCGCCCAGCGGCTGCACATCGGGTGTGATGA...CTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR GCA 90 bp TGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCACCGCTGCCCGCCACCTaGAGCCACTGCACGTGGTTC +
Preference number: 4 (lower is better)
Translates to: WARGHDAHVGPYCPGHLAPLPAT*SHCTWF
Trigger: GAACCACGTGCAGTGGCTGCAGGTGGCGGGCAGCGG...TGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp AGCCTCCAGCTCCTGCACGAGGGTGCTCCACTGTGCCAGGAGGCTGAGCGCTGCCCGCTGCCCGCCACCTaGAGCCACTGCACGTGGTTC +
Preference number: 4 (lower is better)
Translates to: SLQLLHEGAPLCQEAERCPLPAT*SHCTWF
Trigger: GAACCACGTGCAGTGGCTGCAGGTGGCGGGCAGCGG...GCAGCGCTCAGCCTCCTGGCACAGTGGAGCACCCTCGTGCAGGAGCTGGAGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp AGGACCTGGTCAATCATGGCGCCCACCAGCGCCAGGGACTCTGCCTCGTGGGGGCCGCTGCCCGCCACCTaGAGCCACTGCACGTGGTTC +
Preference number: 4 (lower is better)
Translates to: RTWSIMAPTSARDSASWGPLPAT*SHCTWF
Trigger: GAACCACGTGCAGTGGCTGCAGGTGGCGGGCAGCGG...CCCCCACGAGGCAGAGTCCCTGGCGCTGGTGGGCGCCATGATTGACCAGGTCCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS-3UTR GCA 90 bp CAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGCAGGGACGGGACTCCTaGGGGCAGCAGCTCGCACAG +
Preference number: 4 (lower is better)
Translates to: QDTAGPEGTTPTWARIAQQGRDS*GQQLAQ
Trigger: CTGTGCGAGCTGCTGCCCGCAGGAGTCCCGTCCCTG...CTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGGAGGGTGCTCCACTGTaGCAGGAGGCTGAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: GPEGTTPTWARIAQAIWQEGAPL*QEAERC
Trigger: GCAGCGCTCAGCCTCCTGGCACAGTGGAGCACCCTC...CTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGCTCCTGCACGAGGGTaGTCCACTGTGCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: LSVGKTLLGQRARRPRGPAPARG*STVPGG
Trigger: GCCTCCTGGCACAGTGGAGCACCCTCGTGCAGGAGC...GGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp ACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCACCTGAGCAACGTCCCTaGCAGGGCTGGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: TLLGQRARRPRGPVLPRPPEQRP*QGWWVA
Trigger: TGCCACCCACCAGCCCTGGCAGGGACGTTGCTCAGG...TGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATCCTGAGCAACGTCCCTaGCAGGGCTGGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: HCWARGHDAHVGPYCPGHPEQRP*QGWWVA
Trigger: TGCCACCCACCAGCCCTGGCAGGGACGTTGCTCAGG...ATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CAGAGCACCGGCTCCACCAGCTGCGGCACCCCGGACGCTGCGAGCTGGTCCTCAGTGTGGGCAAGACACTaGTGGGCCAGAGGGCACGAC +
Preference number: 4 (lower is better)
Translates to: QSTGSTSCGTPDAASWSSVWARH*WARGHD
Trigger: GTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACAC...TGAGGACCAGCTCGCAGCGTCCGGGGTGCCGCAGCTGGTGGAGCCGGTGCTCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS-3UTR CCA 90 bp CCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCAGGCGGCCTGGTCCGATaGCTCCTCAGCGGAGGGCCG +
Preference number: 4 (lower is better)
Translates to: PQELSVGKTLLGQRARRPGGLVR*LLSGGP
Trigger: CGGCCCTCCGCTGAGGAGCCATCGGACCAGGCCGCC...TGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327949.15
CDS-3UTR CCA 90 bp CAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGCTCCGCGGCGGCCTaGTCCGATGGCTCCTCAGCG +
Preference number: 4 (lower is better)
Translates to: QELSVGKTLLGQRARRPRGSAAA*SDGSSA
Trigger: CGCTGAGGAGCCATCGGACCAGGCCGCCGCGGAGCC...ACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000327949.15
CDS-3UTR CCA 90 bp GGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGGGACCTGGTCAATCATaGCGCCCACCAGCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GPEGTTPTWARIAQAIWQGPGQS*RPPAPG
Trigger: CCCTGGCGCTGGTGGGCGCCATGATTGACCAGGTCC...CTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR CCA 90 bp AAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCGATGTGCAGCCGCTaGGCGCCTGGGTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: KTLLGQRARRPRGPVLPRPMCSR*APGCSS
Trigger: GGAGCTACACCCAGGCGCCCAGCGGCTGCACATCGG...CCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR CCA 90 bp TCACGCCGCTGGCCACCGCCCGCATGTGTGACAGGCACAACTTCCCCGTGCTGTGGGCCTTCACGCCGCTaGCCACCGCCCGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: SRRWPPPACVTGTTSPCCGPSRR*PPPACV
Trigger: CACACATGCGGGCGGTGGCCAGCGGCGTGAAGGCCC...ACAGCACGGGGAAGTTGTGCCTGTCACACATGCGGGCGGTGGCCAGCGGCGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR CCA 90 bp ACCCTTGAAGGCACTGGCTGCCCACAGCTGCGGAAAGCCGCACCGCCGGTACTTCCAGGGGTGTCACGCTaGGGCGCCGGGCCTTCACGC +
Preference number: 4 (lower is better)
Translates to: TLEGTGCPQLRKAAPPVLPGVSR*GAGPSR
Trigger: GCGTGAAGGCCCGGCGCCCCAGCGTGACACCCCTGG...AAGTACCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAGTGCCTTCAAGGGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR CCA 90 bp GGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGCCAGCAGGAGCCCCCTaGCATGAGCTCTCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: GPEGTTPTWARIAQAIWQPAGAP*HELSPQ
Trigger: CTGAGGGGAGAGCTCATGCCAGGGGGCTCCTGCTGG...CTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp AGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCCAGCAGGAGCCCCCTaGCATGAGCTCTCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: RHCWARGHDAHVGPYCPGPAGAP*HELSPQ
Trigger: CTGAGGGGAGAGCTCATGCCAGGGGGCTCCTGCTGG...GCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCT
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp CCAGGGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGGGCACGACGCCCACGTaGGCCCGTATTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PGPSGTECGQDTAGPEGTGTTPT*ARIAQA
Trigger: GGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCC...CGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp GCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGTGGGCAAGACACTGCTaGGCCAGAGGGCACGACGCC +
Preference number: 4 (lower is better)
Translates to: AGPEGTTPTWARIAQAIWWARHC*ARGHDA
Trigger: GGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCA...CCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp CAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGGGGCCGGTGGGGCTTaGGGTGGCCAGACCAGACAT +
Preference number: 4 (lower is better)
Translates to: QDTAGPEGTTPTWARIAQGAGGA*GGQTRH
Trigger: ATGTCTGGTCTGGCCACCCCAAGCCCCACCGGCCCC...CTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR TCA 90 bp GCCCAGGGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCAGATGATGCCCTGCAGTaGGTCCGTGGGCCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: AQGPQELSVGKTLLGQRADDALQ*VRGPAA
Trigger: GGCAGCGGGCCCACGGACTCACTGCAGGGCATCATC...TGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCCTGGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp TGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGCCAGCCGGTCAGGATaGTGCCCTGCAGTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: WARGHDAHVGPYCPGHLAASRSG*CPAVSP
Trigger: CGGACTCACTGCAGGGCATCATCCTGACCGGCTGGC...TGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp GCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGCCAGCCGGTCAGGATaGTGCCCTGCAGTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: ARHCWARGHDAHVGPYCPASRSG*CPAVSP
Trigger: CGGACTCACTGCAGGGCATCATCCTGACCGGCTGGC...TGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp GGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCTCCCCTCAGGGGTCCTaGGCAACGTCCCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: GPQELSVGKTLLGQRARRSPQGS*ATSLPG
Trigger: CCCTGGCAGGGACGTTGCTCAGGACCCCTGAGGGGA...GCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp GGGCCGCCGCGCCTGCGGGTCCCGCTCTCCGCGCGTCTCGGCCATTTTTCTTTCCATCAAATCCTCCCATaGGGCCTGCAGGCACCAGCG +
Preference number: 4 (lower is better)
Translates to: GPPRLRVPLSARLGHFSFHQILP*GLQAPA
Trigger: CGCTGGTGCCTGCAGGCCTCATGGGAGGATTTGATG...GAAAGAAAAATGGCCGAGACGCGCGGAGAGCGGGACCCGCAGGCGCGGCGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583354.5
CDS-3UTR GCA 90 bp CACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCAGAGCCCCCAGCGCCAGGGACTCTaGCTCGTGGGGGTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: HDAHVGPYCPGHLAVQSPQRQGL*LVGVQG
Trigger: ACCCTGAACCCCCACGAGGCAGAGTCCCTGGCGCTG...GGGGCTCTGCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR GCA 90 bp AGGACCTGGTCAATCATGGCGCCCACCAGCGCCAGGGACTCTGCCTCGTGGGGGCAGCGCCAGGGACTCTaGCTCGTGGGGGTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: RTWSIMAPTSARDSASWGQRQGL*LVGVQG
Trigger: ACCCTGAACCCCCACGAGGCAGAGTCCCTGGCGCTG...CCCCCACGAGGCAGAGTCCCTGGCGCTGGTGGGCGCCATGATTGACCAGGTCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
CDS-3UTR GCA 90 bp GCTGGGCGCCTGGGTGTAGCTCCAGGACCTGGTCAATCATGGCGCCCACCAGCGTCATCACACCCGATGTaGAGCCGCTGGGCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: AGRLGVAPGPGQSWRPPASSHPM*SRWAPG
Trigger: CCCAGGCGCCCAGCGGCTGCACATCGGGTGTGATGA...CGCTGGTGGGCGCCATGATTGACCAGGTCCTGGAGCTACACCCAGGCGCCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
CDS-3UTR GCA 90 bp CAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTCTGGCTGCCCACAGCTaGGGAAAGCCGCACCGCCGG +
Preference number: 4 (lower is better)
Translates to: QELSVGKTLLGQRARRPRLAAHS*GKPHRR
Trigger: CCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAG...ACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CGAGCTGGTCCTCAGGCAGGTCTCGGAGCATGTCGTCCCACACCAGGGGTGTCACTGGCTGCCCACAGCTaGGGAAAGCCGCACCGCCGG +
Preference number: 4 (lower is better)
Translates to: RAGPQAGLGACRPTPGVSLAAHS*GKPHRR
Trigger: CCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAG...TGACACCCCTGGTGTGGGACGACATGCTCCGAGACCTGCCTGAGGACCAGCTCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR GCA 90 bp CGCGCCTGCGGGTCCCGCTCTCCGCGCGTCTCGGCCATTTTTCTTTCTGCATCACTGGCTGCCCACAGCTaGGGAAAGCCGCACCGCCGG +
Preference number: 4 (lower is better)
Translates to: RACGSRSPRVSAIFLSASLAAHS*GKPHRR
Trigger: CCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAG...TGATGCAGAAAGAAAAATGGCCGAGACGCGCGGAGAGCGGGACCCGCAGGCGCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR GCA 90 bp CTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCTGGTTCCTGAGGTGGTaGTCAACAGGGGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: LGQRARRPRGPVLPRPFGWFLRW*STGGTA
Trigger: GGCCGTGCCCCCTGTTGAGCACCACCTCAGGAACCA...GCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGGTCAGGATGATGCCCTaGAGTGAGTCCGTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: GPEGTTPTWARIAQAIWQVRMMP*SESVGP
Trigger: CGGGCCCACGGACTCACTGCAGGGCATCATCCTGAC...CTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp TGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGCTCCTGCACGAGGGTaGTCCACTGTGCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: WARGHDAHVGPYCPGHLAAPARG*STVPGG
Trigger: GCCTCCTGGCACAGTGGAGCACCCTCGTGCAGGAGC...TGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCACCTCGCTGAGGTCCTaGAGCAGAGCTTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: LGQRARRPRGPVLPRPFGTSLRS*SRACSR
Trigger: GCGGCTGCAAGCTCTGCTGCAGGACCTCAGCGAGGT...GCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp AGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCGTGTGGGCAAGACACTaGTGGGCCAGAGGGCACGAC +
Preference number: 4 (lower is better)
Translates to: RHCWARGHDAHVGPYCPGVWARH*WARGHD
Trigger: GTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACAC...GCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GGGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGGGGTGCTTGGCCTCCTaGCCTCCGGGTCTTTCGGGG +
Preference number: 4 (lower is better)
Translates to: GPSGTECGQDTAGPEGTTGCLAS*PPGLSG
Trigger: CCCCGAAAGACCCGGAGGGCAGGAGGCCAAGCACCC...CGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR GCA 90 bp GCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACTTGTGTGACGGGTTCCCCGGTGCCTaGCCCTGCCCATGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: ALQQRIHRAAQMEADLCDGFPGA*PCPWVP
Trigger: CGGGACCCATGGGCAGGGGCAGGCACCGGGGAACCC...GTCACACAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000583354.5
CDS-3UTR CCA 90 bp CAGGGGAAGGAGCCCACCTCCCGCAGGTGGGCGAAGGCCGTGTGCTTCAGCACAAGGGACTCTGCCTCGTaGGGGTTCAGGGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: QGKEPTSRRWAKAVCFSTRDSAS*GFRVQG
Trigger: CCCCTGCACCCTGAACCCCCACGAGGCAGAGTCCCT...TGTGCTGAAGCACACGGCCTTCGCCCACCTGCGGGAGGTGGGCTCCTTCCCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
CDS-3UTR CCA 90 bp GCCGTGCACATCCAGGTCGGCCGTGTAGTCCCAGAGCACCGGCTCCACCAGCTGGGACCTGGTCAATCATaGCGCCCACCAGCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: AVHIQVGRVVPEHRLHQLGPGQS*RPPAPG
Trigger: CCCTGGCGCTGGTGGGCGCCATGATTGACCAGGTCC...CAGCTGGTGGAGCCGGTGCTCTGGGACTACACGGCCGACCTGGATGTGCACGGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR CCA 90 bp CAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCTTCACGCCGCTaGCCACCGCCCGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: QELSVGKTLLGQRARRPRGPSRR*PPPACV
Trigger: CACACATGCGGGCGGTGGCCAGCGGCGTGAAGGCCC...ACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp CCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTGTTGCCCTCCAGCCTGCAGTGAGTCCGTaGGCCCGCTGCCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: PLAVVGAEPASDIPVALQPAVSP*ARCPPP
Trigger: AGGTGGCGGGCAGCGGGCCCACGGACTCACTGCAGG...CTGGAGGGCAACAGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp AAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCAGCAGGAGCCCCCTaGCATGAGCTCTCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: KTLLGQRARRPRGPVLPRPAGAP*HELSPQ
Trigger: CTGAGGGGAGAGCTCATGCCAGGGGGCTCCTGCTGG...CCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp CCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCTGGGCAAGACACTGCTaGGCCAGAGGGCACGACGCC +
Preference number: 4 (lower is better)
Translates to: PEGTTPTWARIAQAIWQCWARHC*ARGHDA
Trigger: GGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCA...GCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp TGCGGGCTGGATGTGCTGAACCATGACCGGGTGGATGAGCTTCCGCTGGCGGTGTGCCCCAGTCACGGGTaGCGGATGGGGCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: CGLDVLNHDRVDELPLAVCPSHG*RMGPWA
Trigger: TGCCCACGGCCCCATCCGCCACCCGTGACTGGGGCA...CACCGCCAGCGGAAGCTCATCCACCCGGTCATGGTTCAGCACATCCAGCCCGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578616.5
CDS-3UTR CCA 90 bp GCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGTGGGTGGCTGAGCTaGGGCGGTGAGACCATCCTC +
Preference number: 4 (lower is better)
Translates to: ARHCWARGHDAHVGPYCPGGWLS*GGETIL
Trigger: GAGGATGGTCTCACCGCCCCAGCTCAGCCACCCACC...TGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR CCA 90 bp AGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTACACACACAGCTCCTCTaGCCAAGCCCCCTGCCGACC +
Preference number: 4 (lower is better)
Translates to: SVGKTLLGQRARRPRGPVHTQLL*PSPLPT
Trigger: GGTCGGCAGGGGGCTTGGCCAGAGGAGCTGTGTGTG...TACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR TCA 90 bp GCCGTGCACATCCAGGTCGGCCGTGTAGTCCCAGAGCACCGGCTCCACCAGCTGCACCGCCCGCATGTGTaGCAGGCACAACTTCCCCGT +
Preference number: 4 (lower is better)
Translates to: AVHIQVGRVVPEHRLHQLHRPHV*QAQLPR
Trigger: ACGGGGAAGTTGTGCCTGTCACACATGCGGGCGGTG...CAGCTGGTGGAGCCGGTGCTCTGGGACTACACGGCCGACCTGGATGTGCACGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR TCA 90 bp GCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCACCGCCCGCATGTGTaGCAGGCACAACTTCCCCGT +
Preference number: 4 (lower is better)
Translates to: ARGHDAHVGPYCPGHLAVHRPHV*QAQLPR
Trigger: ACGGGGAAGTTGTGCCTGTCACACATGCGGGCGGTG...CACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp GACAAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACAGGGATGATGCCCTGCAGTaGGTCCGTGGGCCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: DKGKDVAAREGAGPLPNRDDALQ*VRGPAA
Trigger: GGCAGCGGGCCCACGGACTCACTGCAGGGCATCATC...CCTGTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp CAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGGGCAGACACCTCGCTaGGGTCCTGCAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: QDTAGPEGTTPTWARIAQGQTPR*GPAAEL
Trigger: AAGCTCTGCTGCAGGACCTCAGCGAGGTGTCTGCCC...CTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp TGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGGGCAGACACCTCGCTaGGGTCCTGCAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: WARGHDAHVGPYCPGHLAGQTPR*GPAAEL
Trigger: AAGCTCTGCTGCAGGACCTCAGCGAGGTGTCTGCCC...TGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp CAGGAGGCTGAGCGCTGCGGGCTGGATGTGCTGAACCATGACCGGGTGGATGAGTCCCCTCAGGGGTCCTaGGCAACGTCCCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QEAERCGLDVLNHDRVDESPQGS*ATSLPG
Trigger: CCCTGGCAGGGACGTTGCTCAGGACCCCTGAGGGGA...CTCATCCACCCGGTCATGGTTCAGCACATCCAGCCCGCAGCGCTCAGCCTCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp GGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGAGGGCCCTCAGGAACTaGGTGTGGGCAAGACACTGC +
Preference number: 4 (lower is better)
Translates to: GPEGTTPTWARIAQAIWQRALRN*VWARHC
Trigger: GCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCCT...CTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp AGGTCTCGGAGCATGTCGTCCCACACCAGGGGTGTCACGCTGGGGCGCCGGGCCCTGCACTCCAGCCTCTaGGAGGTACGAGACCTTTGG +
Preference number: 4 (lower is better)
Translates to: RSRSMSSHTRGVTLGRRALHSSL*EVRDLW
Trigger: CCAAAGGTCTCGTACCTCTCAGAGGCTGGAGTGCAG...GGCCCGGCGCCCCAGCGTGACACCCCTGGTGTGGGACGACATGCTCCGAGACCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582315.5
CDS-3UTR GCA 90 bp GTCGGCCGTGTAGTCCCAGAGCACCGGCTCCACCAGCTGCGGCACCCCGGACGCTGGGCGAAGGCCGTGTaGTTCAGCACAAACTCCATG +
Preference number: 4 (lower is better)
Translates to: VGRVVPEHRLHQLRHPGRWAKAV*FSTNSM
Trigger: CATGGAGTTTGTGCTGAAGCACACGGCCTTCGCCCA...GCGTCCGGGGTGCCGCAGCTGGTGGAGCCGGTGCTCTGGGACTACACGGCCGAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR GCA 90 bp CGCTGGGCGCCTGGGTGTAGCTCCAGGACCTGGTCAATCATGGCGCCCACCAGCAGGAGGACCTTGCCGTaGACATCCAGGTCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: RWAPGCSSRTWSIMAPTSRRTLP*TSRSAV
Trigger: CACGGCCGACCTGGATGTGCACGGCAAGGTCCTCCT...GCTGGTGGGCGCCATGATTGACCAGGTCCTGGAGCTACACCCAGGCGCCCAGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR GCA 90 bp ACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCAGAGCCCCCGCCACCTGCAGCCACTaGACGTGGTTCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: TTPTWARIAQAIWQCRAPATCSH*TWFLRW
Trigger: CCACCTCAGGAACCACGTGCAGTGGCTGCAGGTGGC...GGGGGCTCTGCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp ACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCAGAGCCCCCGTCAGGATGATGCCCTaGAGTGAGTCCGTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: TTPTWARIAQAIWQCRAPVRMMP*SESVGP
Trigger: CGGGCCCACGGACTCACTGCAGGGCATCATCCTGAC...GGGGGCTCTGCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCAGGAGGCTGAGCGCTaGGGGCTGGATGTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: ARGHDAHVGPYCPGHLAVQEAER*GLDVLN
Trigger: GTTCAGCACATCCAGCCCGCAGCGCTCAGCCTCCTG...CACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp AAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGGCAGCCTCCAGCTCCTaGACGAGGGTGCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: KTLLGQRARRPRGPVLPRAASSS*TRVLHC
Trigger: ACAGTGGAGCACCCTCGTGCAGGAGCTGGAGGCTGC...CCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp TGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCACGCTGCAGGCTGGGGTaGACGTTTTCCTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: WARGHDAHVGPYCPGHLARCRLG*TFSSSH
Trigger: GTGGCTGGAGGAAAACGTGCACCCCAGCCTGCAGCG...TGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp ACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTCGCTGCAGGCTGGGGTaGACGTTTTCCTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: TAGPEGTTPTWARIAQAIRCRLG*TFSSSH
Trigger: GTGGCTGGAGGAAAACGTGCACCCCAGCCTGCAGCG...AATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp ACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTACCTCGCTGAGGTCCTaGAGCAGAGCTTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: TAGPEGTTPTWARIAQAITSLRS*SRACSR
Trigger: GCGGCTGCAAGCTCTGCTGCAGGACCTCAGCGAGGT...AATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCACCTCGCTGAGGTCCTaGAGCAGAGCTTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: PEGTTPTWARIAQAIWQCTSLRS*SRACSR
Trigger: GCGGCTGCAAGCTCTGCTGCAGGACCTCAGCGAGGT...GCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GGGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCTGAGCAACGTCCCTaGCAGGGCTGGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: GPSGTECGQDTAGPEGTTPEQRP*QGWWVA
Trigger: TGCCACCCACCAGCCCTGGCAGGGACGTTGCTCAGG...CGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATCACGTGGGCCCGTATTaGCCAGGCCATTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: HCWARGHDAHVGPYCPGHHVGPY*PGHLAV
Trigger: CACTGCCAAATGGCCTGGGCAATACGGGCCCACGTG...ATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGGTGTGGGCAAGACACTaGTGGGCCAGAGGGCACGAC +
Preference number: 4 (lower is better)
Translates to: ARGHDAHVGPYCPGHLAVVWARH*WARGHD
Trigger: GTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACAC...CACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GCGCCTGCGGGTCCCGCTCTCCGCGCGTCTCGGCCATTTTTCTTTCTGCATCAGCTCTCCCCCAGGGGCTaGCCAGGGCCCTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: APAGPALRASRPFFFLHQLSPRG*PGPSGT
Trigger: AGTTCCTGAGGGCCCTGGGCAGCCCCTGGGGGAGAG...CTGATGCAGAAAGAAAAATGGCCGAGACGCGCGGAGAGCGGGACCCGCAGGCGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR GCA 90 bp ACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCAACTGTGTCTGAGGGGTaGCTCCCGCGTCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: TLLGQRARRPRGPVLPRPTVSEG*LPRHSP
Trigger: TGGAGAGTGACGCGGGAGGCACCCCTCAGACACAGT...TGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR GCA 90 bp GACAAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACAGGCCTGAGCCCCACACCTaGTCGGCCAGGTGGGCAGGA +
Preference number: 4 (lower is better)
Translates to: DKGKDVAAREGAGPLPNRPEPHT*SARWAG
Trigger: TCCTGCCCACCTGGCCGAGCAGGTGTGGGGCTCAGG...CCTGTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000583354.5
CDS-3UTR CCA 90 bp CACCCGATGTGCAGCCGCTGGGCGCCTGGGTGTAGCTCCAGGACCTGGTCAATCGGACCTGGTCAATCATaGCGCCCACCAGCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: HPMCSRWAPGCSSRTWSIGPGQS*RPPAPG
Trigger: CCCTGGCGCTGGTGGGCGCCATGATTGACCAGGTCC...GATTGACCAGGTCCTGGAGCTACACCCAGGCGCCCAGCGGCTGCACATCGGGTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
CDS-3UTR CCA 90 bp CGAGCTGGTCCTCAGGCAGGTCTCGGAGCATGTCGTCCCACACCAGGGGTGTCACCGATGTGCAGCCGCTaGGCGCCTGGGTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: RAGPQAGLGACRPTPGVSPMCSR*APGCSS
Trigger: GGAGCTACACCCAGGCGCCCAGCGGCTGCACATCGG...TGACACCCCTGGTGTGGGACGACATGCTCCGAGACCTGCCTGAGGACCAGCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR CCA 90 bp TCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGCCGGACGCTGCGAGCTaGTCCTCAGGCAGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: SGTECGQDTAGPEGTTPTPDAAS*SSGRSR
Trigger: CCGAGACCTGCCTGAGGACCAGCTCGCAGCGTCCGG...CGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp CTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCACGTGGTTCCTGAGGTaGTGCTCAACAGGGGGCACG +
Preference number: 4 (lower is better)
Translates to: LGQRARRPRGPVLPRPFGTWFLR*CSTGGT
Trigger: CGTGCCCCCTGTTGAGCACCACCTCAGGAACCACGT...GCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp CCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACTTGCCTGCAGTGAGTCCGTaGGCCCGCTGCCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: PVALQQRIHRAAQMEADLPAVSP*ARCPPP
Trigger: AGGTGGCGGGCAGCGGGCCCACGGACTCACTGCAGG...CAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp GGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCAGCCGCTGCAGGCTaGGGTGCACGTTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: GQRARRPRGPVLPRPFGSAAAAG*GARFPP
Trigger: TGGAGGAAAACGTGCACCCCAGCCTGCAGCGGCTGC...ACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp TTGCAGCCGCTGCAGGCTGGGGTGCACGTTTTCCTCCAGCCACTCCTCCACGGCCCAGCAGGAGCCCCCTaGCATGAGCTCTCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LQPLQAGVHVFLQPLLHGPAGAP*HELSPQ
Trigger: CTGAGGGGAGAGCTCATGCCAGGGGGCTCCTGCTGG...GCCGTGGAGGAGTGGCTGGAGGAAAACGTGCACCCCAGCCTGCAGCGGCTGCAA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp CCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACTTGGGCACGACGCCCACGTaGGCCCGTATTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: PVALQQRIHRAAQMEADLGTTPT*ARIAQA
Trigger: GGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCC...CAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp TTGCAGCCGCTGCAGGCTGGGGTGCACGTTTTCCTCCAGCCACTCCTCCACGGCCGGTGGGGCTTGGGGTaGCCAGACCAGACATACCGC +
Preference number: 4 (lower is better)
Translates to: LQPLQAGVHVFLQPLLHGRWGLG*PDQTYR
Trigger: GCGGTATGTCTGGTCTGGCCACCCCAAGCCCCACCG...GCCGTGGAGGAGTGGCTGGAGGAAAACGTGCACCCCAGCCTGCAGCGGCTGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR CCA 90 bp GAACCAGCCAGTGACATACCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGTGGCGGATGGGGCCGTaGGCAAGGGACACGGCCGCG +
Preference number: 4 (lower is better)
Translates to: EPASDIPVALQQRIHRAAWRMGP*ARDTAA
Trigger: CGCGGCCGTGTCCCTTGCCCACGGCCCCATCCGCCA...CGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGGTATGTCACTGGCTGGTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583354.5
CDS-3UTR TCA 90 bp AGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTAGCCGGTACTTCTGCATaGGGAGGACCTTGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: SVGKTLLGQRARRPRGPVAGTSA*GGPCRA
Trigger: TGCACGGCAAGGTCCTCCTCATGCAGAAGTACCGGC...TACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp ACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTACTGCACGTGGTTCCTaGGGTGGTGCTCAACAGGGG +
Preference number: 4 (lower is better)
Translates to: TAGPEGTTPTWARIAQAITARGS*GGAQQG
Trigger: CCCCTGTTGAGCACCACCTCAGGAACCACGTGCAGT...AATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp AGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACAGGGTCCGGGCAGACACCTCGCTaGGGTCCTGCAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: RARMLLPGKEPAPSLTGSGQTPR*GPAAEL
Trigger: AAGCTCTGCTGCAGGACCTCAGCGAGGTGTCTGCCC...GGACCCTGTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp CCCTTGAAGGCACTGGCTGCCCACAGCTGCGGAAAGCCGCACCGCCGGTACTTCGGGCAGACACCTCGCTaGGGTCCTGCAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: PLKALAAHSCGKPHRRYFGQTPR*GPAAEL
Trigger: AAGCTCTGCTGCAGGACCTCAGCGAGGTGTCTGCCC...GAAGTACCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAGTGCCTTCAAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS-3UTR TCA 90 bp GCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACTTGTGTGACTCCCCTCAGGGGTCCTaGGCAACGTCCCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ALQQRIHRAAQMEADLCDSPQGS*ATSLPG
Trigger: CCCTGGCAGGGACGTTGCTCAGGACCCCTGAGGGGA...GTCACACAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp AAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGAGGGCCCTCAGGAACTaGGTGTGGGCAAGACACTGC +
Preference number: 4 (lower is better)
Translates to: KTLLGQRARRPRGPVLPRRALRN*VWARHC
Trigger: GCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCCT...CCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp AGCCTCCAGCTCCTGCACGAGGGTGCTCCACTGTGCCAGGAGGCTGAGCGCTGCACCATCCTCCGACTGTaGGGACCACCACAGTCCAGC +
Preference number: 4 (lower is better)
Translates to: SLQLLHEGAPLCQEAERCTILRL*GPPQSS
Trigger: GCTGGACTGTGGTGGTCCTCACAGTCGGAGGATGGT...GCAGCGCTCAGCCTCCTGGCACAGTGGAGCACCCTCGTGCAGGAGCTGGAGGCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR GCA 90 bp TGGTCCTCAGGCAGGTCTCGGAGCATGTCGTCCCACACCAGGGGTGTCACGCTGCAGCGCCAGGGACTCTaGCTCGTGGGGGTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: WSSGRSRSMSSHTRGVTLQRQGL*LVGVQG
Trigger: ACCCTGAACCCCCACGAGGCAGAGTCCCTGGCGCTG...CAGCGTGACACCCCTGGTGTGGGACGACATGCTCCGAGACCTGCCTGAGGACCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR GCA 90 bp CCGATGTGCAGCCGCTGGGCGCCTGGGTGTAGCTCCAGGACCTGGTCAATCATGCAGCGCCAGGGACTCTaGCTCGTGGGGGTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: PMCSRWAPGCSSRTWSIMQRQGL*LVGVQG
Trigger: ACCCTGAACCCCCACGAGGCAGAGTCCCTGGCGCTG...CATGATTGACCAGGTCCTGGAGCTACACCCAGGCGCCCAGCGGCTGCACATCGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
CDS-3UTR GCA 90 bp CCGATGTGCAGCCGCTGGGCGCCTGGGTGTAGCTCCAGGACCTGGTCAATCATGTCATCACACCCGATGTaGAGCCGCTGGGCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PMCSRWAPGCSSRTWSIMSSHPM*SRWAPG
Trigger: CCCAGGCGCCCAGCGGCTGCACATCGGGTGTGATGA...CATGATTGACCAGGTCCTGGAGCTACACCCAGGCGCCCAGCGGCTGCACATCGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
CDS-3UTR GCA 90 bp GTCGGCCGTGTAGTCCCAGAGCACCGGCTCCACCAGCTGCGGCACCCCGGACGCGGCACAACTTCCCCGTaGTGTTCTGCTCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: VGRVVPEHRLHQLRHPGRGTTSP*CSALAV
Trigger: TACAGCAAGAGCAGAACAGCACGGGGAAGTTGTGCC...GCGTCCGGGGTGCCGCAGCTGGTGGAGCCGGTGCTCTGGGACTACACGGCCGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR GCA 90 bp TGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCACACCGCCGGTACTTCTaGATGAGGAGGACCTTGCCG +
Preference number: 4 (lower is better)
Translates to: WARGHDAHVGPYCPGHLAHRRYF*MRRTLP
Trigger: CGGCAAGGTCCTCCTCATGCAGAAGTACCGGCGGTG...TGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp AACTTCCCCGTGCTGTTCTGCTCTTGCTGTAGCCACCGGCGCGAGGCCTCCCCCGCCACCTGCAGCCACTaGACGTGGTTCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: NFPVLFCSCCSHRREASPATCSH*TWFLRW
Trigger: CCACCTCAGGAACCACGTGCAGTGGCTGCAGGTGGC...GGGGGAGGCCTCGCGCCGGTGGCTACAGCAAGAGCAGAACAGCACGGGGAAGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS-3UTR GCA 90 bp GCTGCAGGCTGGGGTGCACGTTTTCCTCCAGCCACTCCTCCACGGCATCCGGGTGTCAGGATGATGCCCTaGAGTGAGTCCGTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: AAGWGARFPPATPPRHPGVRMMP*SESVGP
Trigger: CGGGCCCACGGACTCACTGCAGGGCATCATCCTGAC...ACCCGGATGCCGTGGAGGAGTGGCTGGAGGAAAACGTGCACCCCAGCCTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CCACTGTGCCAGGAGGCTGAGCGCTGCGGGCTGGATGTGCTGAACCATGACCGGGTCAGGATGATGCCCTaGAGTGAGTCCGTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: PLCQEAERCGLDVLNHDRVRMMP*SESVGP
Trigger: CGGGCCCACGGACTCACTGCAGGGCATCATCCTGAC...CCGGTCATGGTTCAGCACATCCAGCCCGCAGCGCTCAGCCTCCTGGCACAGTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CGGGTGGATGAGCTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACAGGGACGGGACTCCTaGGGGCAGCAGCTCGCACAG +
Preference number: 4 (lower is better)
Translates to: RVDELPLAVVGAEPASDIQGRDS*GQQLAQ
Trigger: CTGTGCGAGCTGCTGCCCGCAGGAGTCCCGTCCCTG...TATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAGCTCATCCACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACCGCGTAGAAGCAACTaGAGGCAGGCGGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: PQELSVGKTLLGQRARRPPRRSN*RQAARD
Trigger: GTCCCTGGCCGCCTGCCTGCAGTTGCTTCTACGCGG...TGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000582429.5
CDS-3UTR GCA 90 bp TCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGCCGCGTAGAAGCAACTaGAGGCAGGCGGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SGTECGQDTAGPEGTTPTPRRSN*RQAARD
Trigger: GTCCCTGGCCGCCTGCCTGCAGTTGCTTCTACGCGG...CGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000582429.5
CDS-3UTR GCA 90 bp TTGCAGCCGCTGCAGGCTGGGGTGCACGTTTTCCTCCAGCCACTCCTCCACGGCCAGGAGGCTGAGCGCTaGGGGCTGGATGTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LQPLQAGVHVFLQPLLHGQEAER*GLDVLN
Trigger: GTTCAGCACATCCAGCCCGCAGCGCTCAGCCTCCTG...GCCGTGGAGGAGTGGCTGGAGGAAAACGTGCACCCCAGCCTGCAGCGGCTGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp AACCATGACCGGGTGGATGAGCTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCGAGGGTGCTCCACTGTaGCAGGAGGCTGAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: NHDRVDELPLAVVGAEPAEGAPL*QEAERC
Trigger: GCAGCGCTCAGCCTCCTGGCACAGTGGAGCACCCTC...GGCTGGTTCAGCCCCTACCACCGCCAGCGGAAGCTCATCCACCCGGTCATGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp TCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGGAGGGTGCTCCACTGTaGCAGGAGGCTGAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: SGTECGQDTAGPEGTTPTEGAPL*QEAERC
Trigger: GCAGCGCTCAGCCTCCTGGCACAGTGGAGCACCCTC...CGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTGTTGCCCTCCAGGCTCCTGCACGAGGGTaGTCCACTGTGCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: PLAVVGAEPASDIPVALQAPARG*STVPGG
Trigger: GCCTCCTGGCACAGTGGAGCACCCTCGTGCAGGAGC...CTGGAGGGCAACAGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCGCAGCCTCCAGCTCCTaGACGAGGGTGCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: GPQELSVGKTLLGQRARRAASSS*TRVLHC
Trigger: ACAGTGGAGCACCCTCGTGCAGGAGCTGGAGGCTGC...GCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCAGAGCCCCCACGTGGGCCCGTATTaGCCAGGCCATTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: HDAHVGPYCPGHLAVQSPHVGPY*PGHLAV
Trigger: CACTGCCAAATGGCCTGGGCAATACGGGCCCACGTG...GGGGCTCTGCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CCAGGGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGGTGTGGGCAAGACACTaGTGGGCCAGAGGGCACGAC +
Preference number: 4 (lower is better)
Translates to: PGPSGTECGQDTAGPEGTVWARH*WARGHD
Trigger: GTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACAC...CGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCCTGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GCGCCTGCGGGTCCCGCTCTCCGCGCGTCTCGGCCATTTTTCTTTCTGCATCAGGCCCATGGGTCCCGCTaGTCCCTCAGGAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: APAGPALRASRPFFFLHQAHGSR*SLRRPG
Trigger: TCCAGGTCTCCTGAGGGAGCAGCGGGACCCATGGGC...CTGATGCAGAAAGAAAAATGGCCGAGACGCGCGGAGAGCGGGACCCGCAGGCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000583354.5
CDS-3UTR CCA 90 bp ACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATGTAGCTCCAGGACCTaGTCAATCATGGCGCCCACC +
Preference number: 4 (lower is better)
Translates to: TLLGQRARRPRGPVLPRPCSSRT*SIMAPT
Trigger: GGTGGGCGCCATGATTGACCAGGTCCTGGAGCTACA...TGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR CCA 90 bp TCCGAGGTAATAGACCTCATCACACCCGATGTGCAGCCGCTGGGCGCCTGGGTGCCGATGTGCAGCCGCTaGGCGCCTGGGTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SEVIDLITPDVQPLGAWVPMCSR*APGCSS
Trigger: GGAGCTACACCCAGGCGCCCAGCGGCTGCACATCGG...CACCCAGGCGCCCAGCGGCTGCACATCGGGTGTGATGAGGTCTATTACCTCGGA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
CDS-3UTR CCA 90 bp GGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTACGTGGTTCCTGAGGTaGTGCTCAACAGGGGGCACG +
Preference number: 4 (lower is better)
Translates to: GQRARRPRGPVLPRPFGSTWFLR*CSTGGT
Trigger: CGTGCCCCCTGTTGAGCACCACCTCAGGAACCACGT...ACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp GCTGCAGGCTGGGGTGCACGTTTTCCTCCAGCCACTCCTCCACGGCATCCGGGTGCAGCCGCTGCAGGCTaGGGTGCACGTTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: AAGWGARFPPATPPRHPGAAAAG*GARFPP
Trigger: TGGAGGAAAACGTGCACCCCAGCCTGCAGCGGCTGC...ACCCGGATGCCGTGGAGGAGTGGCTGGAGGAAAACGTGCACCCCAGCCTGCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp TGTGACAAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACGTCACGGGTGGCGGATaGGGCCGTGGGCAAGGGACA +
Preference number: 4 (lower is better)
Translates to: CDKGKDVAAREGAGPLPNVTGGG*GRGQGT
Trigger: TGTCCCTTGCCCACGGCCCCATCCGCCACCCGTGAC...GTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR CCA 90 bp TTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACTTGTGTGTGCCCCAGTCACGGGTaGCGGATGGGGCCGTGGGCA +
Preference number: 4 (lower is better)
Translates to: LPSSSASTELRRWRLTCVCPSHG*RMGPWA
Trigger: TGCCCACGGCCCCATCCGCCACCCGTGACTGGGGCA...CACACAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR CCA 90 bp AAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACAGGGTCGGGTGGTTGGAGCACTaGGTGCTTGGCCTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: KGKDVAAREGAGPLPNRVGWLEH*VLGLLP
Trigger: GGGCAGGAGGCCAAGCACCCAGTGCTCCAACCACCC...GACCCTGTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR CCA 90 bp GGGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGGTCCAGCAGGGTGGTTaGAGCACTGGGTGCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GPSGTECGQDTAGPEGTTVQQGG*STGCLA
Trigger: GGCCAAGCACCCAGTGCTCCAACCACCCTGCTGGAC...CGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR CCA 90 bp GCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCAGAGCCCTGTGTGCAGCAAAGGTaGAGCCGTTCCCCACCTCCG +
Preference number: 4 (lower is better)
Translates to: ARRPRGPVLPRPFGSAEPCVQQR*SRSPPP
Trigger: CGGAGGTGGGGAACGGCTCCACCTTTGCTGCACACA...GGGCTCTGCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR TCA 90 bp GTGGATGAGCTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTGCCCCGTGGCACCCTTaGAGGCACTGGCTGCCCACA +
Preference number: 4 (lower is better)
Translates to: VDELPLAVVGAEPASDIPAPWHP*RHWLPT
Trigger: TGTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGC...AGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAGCTCATCCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp CGGGTGGATGAGCTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATAGCCAGCCGGTCAGGATaGTGCCCTGCAGTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: RVDELPLAVVGAEPASDIASRSG*CPAVSP
Trigger: CGGACTCACTGCAGGGCATCATCCTGACCGGCTGGC...TATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAGCTCATCCACCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp TTTCCTCCAGCCACTCCTCCACGGCATCCGGGTAGAAAGCCAGCTGCAGGGCAGGCCAGCCGGTCAGGATaGTGCCCTGCAGTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: FPPATPPRHPGRKPAAGQASRSG*CPAVSP
Trigger: CGGACTCACTGCAGGGCATCATCCTGACCGGCTGGC...CTGCCCTGCAGCTGGCTTTCTACCCGGATGCCGTGGAGGAGTGGCTGGAGGAAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp CAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGCGGGCTGGATGTGCTaGACCATGACCGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: QELSVGKTLLGQRARRPRAGWMC*TMTGWM
Trigger: CATCCACCCGGTCATGGTTCAGCACATCCAGCCCGC...ACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp CAGGGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGAGCGGGCTGGATGTGCTaGACCATGACCGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: QGPQELSVGKTLLGQRARAGWMC*TMTGWM
Trigger: CATCCACCCGGTCATGGTTCAGCACATCCAGCCCGC...TCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp TTGCAGCCGCTGCAGGCTGGGGTGCACGTTTTCCTCCAGCCACTCCTCCACGGCAGGGCCCTCAGGAACTaGGTGTGGGCAAGACACTGC +
Preference number: 4 (lower is better)
Translates to: LQPLQAGVHVFLQPLLHGRALRN*VWARHC
Trigger: GCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCCT...GCCGTGGAGGAGTGGCTGGAGGAAAACGTGCACCCCAGCCTGCAGCGGCTGCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp CCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCAGGAGACCTGGAAGTGTaGGTGCTGGGTCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: PQELSVGKTLLGQRARRPGDLEV*VLGPGC
Trigger: GCACCCTGGACCCAGCACTCACACTTCCAGGTCTCC...TGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR GCA 90 bp GCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCAGAGCCCTTCCCCGTGCTGTTCTaGTCTTGCTGTAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: ARRPRGPVLPRPFGSAEPFPVLF*SCCSHR
Trigger: CCGGTGGCTACAGCAAGAGCAGAACAGCACGGGGAA...GGGCTCTGCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp AAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACAGGGTCAGGAGGACCTTGCCGTaGACATCCAGGTCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: KGKDVAAREGAGPLPNRVRRTLP*TSRSAV
Trigger: CACGGCCGACCTGGATGTGCACGGCAAGGTCCTCCT...GACCCTGTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp AACTTCCCCGTGCTGTTCTGCTCTTGCTGTAGCCACCGGCGCGAGGCCTCCCCCCACCGCCGGTACTTCTaGATGAGGAGGACCTTGCCG +
Preference number: 4 (lower is better)
Translates to: NFPVLFCSCCSHRREASPHRRYF*MRRTLP
Trigger: CGGCAAGGTCCTCCTCATGCAGAAGTACCGGCGGTG...GGGGGAGGCCTCGCGCCGGTGGCTACAGCAAGAGCAGAACAGCACGGGGAAGTT
64% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR GCA 90 bp CAGGAGGCTGAGCGCTGCGGGCTGGATGTGCTGAACCATGACCGGGTGGATGAGGCCACCTGCAGCCACTaGACGTGGTTCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QEAERCGLDVLNHDRVDEATCSH*TWFLRW
Trigger: CCACCTCAGGAACCACGTGCAGTGGCTGCAGGTGGC...CTCATCCACCCGGTCATGGTTCAGCACATCCAGCCCGCAGCGCTCAGCCTCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GAACCAGCCAGTGACATACCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGGGACGGGACTCCTaGGGGCAGCAGCTCGCACAG +
Preference number: 4 (lower is better)
Translates to: EPASDIPVALQQRIHRAAQGRDS*GQQLAQ
Trigger: CTGTGCGAGCTGCTGCCCGCAGGAGTCCCGTCCCTG...CGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGGTATGTCACTGGCTGGTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTGTTGCCCTCCAGCAGCCGCGTAGAAGCAACTaGAGGCAGGCGGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LAVVGAEPASDIPVALQQPRRSN*RQAARD
Trigger: GTCCCTGGCCGCCTGCCTGCAGTTGCTTCTACGCGG...CTGCTGGAGGGCAACAGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR GCA 90 bp CGATGTGCAGCCGCTGGGCGCCTGGGTGTAGCTCCAGGACCTGGTCAATCATGGCAGGAGGCTGAGCGCTaGGGGCTGGATGTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: RCAAAGRLGVAPGPGQSWQEAER*GLDVLN
Trigger: GTTCAGCACATCCAGCCCGCAGCGCTCAGCCTCCTG...CCATGATTGACCAGGTCCTGGAGCTACACCCAGGCGCCCAGCGGCTGCACATCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS-3UTR GCA 90 bp GCTCCACTGTGCCAGGAGGCTGAGCGCTGCGGGCTGGATGTGCTGAACCATGACGCAGCCTCCAGCTCCTaGACGAGGGTGCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: APLCQEAERCGLDVLNHDAASSS*TRVLHC
Trigger: ACAGTGGAGCACCCTCGTGCAGGAGCTGGAGGCTGC...GTCATGGTTCAGCACATCCAGCCCGCAGCGCTCAGCCTCCTGGCACAGTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp TCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGACCTCGCTGAGGTCCTaGAGCAGAGCTTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SGTECGQDTAGPEGTTPTTSLRS*SRACSR
Trigger: GCGGCTGCAAGCTCTGCTGCAGGACCTCAGCGAGGT...CGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp ATACCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACAGGGCAGGAGGGAAGTaGCCCAGTCACGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: IPVALQQRIHRAAQMEADRAGGK*PSHGWR
Trigger: CCGCCACCCGTGACTGGGGCACTTCCCTCCTGCCCT...GTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGGTAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR GCA 90 bp GCGCCTGCGGGTCCCGCTCTCCGCGCGTCTCGGCCATTTTTCTTTCTGCATCAGTCCTCCCATGAGGCCTaGAGGCACCAGCGTGGACGA +
Preference number: 4 (lower is better)
Translates to: APAGPALRASRPFFFLHQSSHEA*RHQRGR
Trigger: TCGTCCACGCTGGTGCCTGCAGGCCTCATGGGAGGA...CTGATGCAGAAAGAAAAATGGCCGAGACGCGCGGAGAGCGGGACCCGCAGGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583354.5
CDS-3UTR GCA 90 bp AACCATGACCGGGTGGATGAGCTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCTCGCGTAGAAGCAACTaGAGGCAGGCGGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: NHDRVDELPLAVVGAEPASRRSN*RQAARD
Trigger: GTCCCTGGCCGCCTGCCTGCAGTTGCTTCTACGCGA...GGCTGGTTCAGCCCCTACCACCGCCAGCGGAAGCTCATCCACCCGGTCATGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS-3UTR GCA 90 bp GCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACTTGTGTGACGGTTGGAGCACTGGGTaGTTGGCCTCCTGCCCTCCG +
Preference number: 4 (lower is better)
Translates to: ALQQRIHRAAQMEADLCDGWSTG*LASCPP
Trigger: CGGAGGGCAGGAGGCCAAGCACCCAGTGCTCCAACC...GTCACACAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR CCA 90 bp GCGCGAGGCCTCCCCCTCTCCGAGGTAATAGACCTCATCACACCCGATGTGCAGAGGGACTCTGCCTCGTaGGGGTTCAGGGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ARGLPLSEVIDLITPDVQRDSAS*GFRVQG
Trigger: CCCCTGCACCCTGAACCCCCACGAGGCAGAGTCCCT...CTGCACATCGGGTGTGATGAGGTCTATTACCTCGGAGAGGGGGAGGCCTCGCGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
CDS-3UTR CCA 90 bp TGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCATGTAGCTCCAGGACCTaGTCAATCATGGCGCCCACC +
Preference number: 4 (lower is better)
Translates to: WARGHDAHVGPYCPGHLACSSRT*SIMAPT
Trigger: GGTGGGCGCCATGATTGACCAGGTCCTGGAGCTACA...TGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR CCA 90 bp CAGGGGAAGGAGCCCACCTCCCGCAGGTGGGCGAAGGCCGTGTGCTTCAGCACATGTAGCTCCAGGACCTaGTCAATCATGGCGCCCACC +
Preference number: 4 (lower is better)
Translates to: QGKEPTSRRWAKAVCFSTCSSRT*SIMAPT
Trigger: GGTGGGCGCCATGATTGACCAGGTCCTGGAGCTACA...TGTGCTGAAGCACACGGCCTTCGCCCACCTGCGGGAGGTGGGCTCCTTCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
CDS-3UTR CCA 90 bp GGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCACGTGGTTCCTGAGGTaGTGCTCAACAGGGGGCACG +
Preference number: 4 (lower is better)
Translates to: GPQELSVGKTLLGQRARRTWFLR*CSTGGT
Trigger: CGTGCCCCCTGTTGAGCACCACCTCAGGAACCACGT...GCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp GCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCAGAGCCCTGCAGCCACTGCACGTaGTTCCTGAGGTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: ARRPRGPVLPRPFGSAEPCSHCT*FLRWCS
Trigger: TGAGCACCACCTCAGGAACCACGTGCAGTGGCTGCA...GGGCTCTGCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp CAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCAGCCTGTAGGCGTACTTaGCCCTCAGCAGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: QRARRPRGPVLPRPFGSAACRRT*PSAASE
Trigger: CTCTGAGGCTGCTGAGGGCCAAGTACGCCTACAGGC...TGCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS-3UTR CCA 90 bp ACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTCACAGTCCAGCAGGGTaGTTGGAGCACTGGGTGCTT +
Preference number: 4 (lower is better)
Translates to: TAGPEGTTPTWARIAQAIHSPAG*LEHWVL
Trigger: AAGCACCCAGTGCTCCAACCACCCTGCTGGACTGTG...AATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR CCA 90 bp TGTGACAAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACACCTGCTCGGCCAGGTaGGCAGGACGTGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: CDKGKDVAAREGAGPLPNTCSAR*AGRVCS
Trigger: GCTGCACACACGTCCTGCCCACCTGGCCGAGCAGGT...GTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTCACA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000583354.5
CDS-3UTR TCA 90 bp GCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACTTGTGTGACGCGGGCTGGATGTGCTaGACCATGACCGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: ALQQRIHRAAQMEADLCDAGWMC*TMTGWM
Trigger: CATCCACCCGGTCATGGTTCAGCACATCCAGCCCGC...GTCACACAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp CAGGAGGCTGAGCGCTGCGGGCTGGATGTGCTGAACCATGACCGGGTGGATGAGAGGGCCCTCAGGAACTaGGTGTGGGCAAGACACTGC +
Preference number: 4 (lower is better)
Translates to: QEAERCGLDVLNHDRVDERALRN*VWARHC
Trigger: GCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCCT...CTCATCCACCCGGTCATGGTTCAGCACATCCAGCCCGCAGCGCTCAGCCTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp ATACCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACCTTGCTGCAAGAGGCTaGCGGCCAGAGGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: IPVALQQRIHRAAQMEADLAARG*RPEGRR
Trigger: CCTCCTGCCCTCTGGCCGTCAGCCTCTTGCAGCAAG...GTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGGTAT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR TCA 90 bp GTGGATGAGCTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTGCTGAGCTGGGGCGGTaGGACCATCCTCCGACTGTG +
Preference number: 4 (lower is better)
Translates to: VDELPLAVVGAEPASDIPAELGR*DHPPTV
Trigger: CACAGTCGGAGGATGGTCTCACCGCCCCAGCTCAGC...AGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAGCTCATCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR GCA 90 bp GGGCGCCTGGGTGTAGCTCCAGGACCTGGTCAATCATGGCGCCCACCAGCGCCATGGGCGAAGGCCGTGTaGTTCAGCACAAACTCCATG +
Preference number: 4 (lower is better)
Translates to: GRLGVAPGPGQSWRPPAPWAKAV*FSTNSM
Trigger: CATGGAGTTTGTGCTGAAGCACACGGCCTTCGCCCA...TGGCGCTGGTGGGCGCCATGATTGACCAGGTCCTGGAGCTACACCCAGGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
CDS-3UTR GCA 90 bp AACTTCCCCGTGCTGTTCTGCTCTTGCTGTAGCCACCGGCGCGAGGCCTCCCCCTTCCCCGTGCTGTTCTaGTCTTGCTGTAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: NFPVLFCSCCSHRREASPFPVLF*SCCSHR
Trigger: CCGGTGGCTACAGCAAGAGCAGAACAGCACGGGGAA...GGGGGAGGCCTCGCGCCGGTGGCTACAGCAAGAGCAGAACAGCACGGGGAAGTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR GCA 90 bp GCCACCGCCCGCATGTGTGACAGGCACAACTTCCCCGTGCTGTTCTGCTCTTGCAGGAGGACCTTGCCGTaGACATCCAGGTCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: ATARMCDRHNFPVLFCSCRRTLP*TSRSAV
Trigger: CACGGCCGACCTGGATGTGCACGGCAAGGTCCTCCT...GCAAGAGCAGAACAGCACGGGGAAGTTGTGCCTGTCACACATGCGGGCGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR GCA 90 bp TGCGGGCTGGATGTGCTGAACCATGACCGGGTGGATGAGCTTCCGCTGGCGGTGCACCGCCGGTACTTCTaGATGAGGAGGACCTTGCCG +
Preference number: 4 (lower is better)
Translates to: CGLDVLNHDRVDELPLAVHRRYF*MRRTLP
Trigger: CGGCAAGGTCCTCCTCATGCAGAAGTACCGGCGGTG...CACCGCCAGCGGAAGCTCATCCACCCGGTCATGGTTCAGCACATCCAGCCCGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GACTTGTGTGACAAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCGCCACCTGCAGCCACTaGACGTGGTTCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: DLCDKGKDVAAREGAGPLATCSH*TWFLRW
Trigger: CCACCTCAGGAACCACGTGCAGTGGCTGCAGGTGGC...GAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTCACACAAGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GATGAGCTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTGTTCCGCTGCCCGCCACCTaGAGCCACTGCACGTGGTTC +
Preference number: 4 (lower is better)
Translates to: DELPLAVVGAEPASDIPVPLPAT*SHCTWF
Trigger: GAACCACGTGCAGTGGCTGCAGGTGGCGGGCAGCGG...AACAGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAGCTCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTGTTGCCCTCCAGCAGGCAGCCTCCAGCTCCTaGACGAGGGTGCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: LAVVGAEPASDIPVALQQAASSS*TRVLHC
Trigger: ACAGTGGAGCACCCTCGTGCAGGAGCTGGAGGCTGC...CTGCTGGAGGGCAACAGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTGTTGCCCTCCAGCAGCGCTGCAGGCTGGGGTaGACGTTTTCCTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LAVVGAEPASDIPVALQQRCRLG*TFSSSH
Trigger: GTGGCTGGAGGAAAACGTGCACCCCAGCCTGCAGCG...CTGCTGGAGGGCAACAGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCAAGAGCTTGCAGCCGCTaGAGGCTGGGGTGCACGTTT +
Preference number: 4 (lower is better)
Translates to: PQELSVGKTLLGQRARRPRACSR*RLGCTF
Trigger: AAACGTGCACCCCAGCCTGCAGCGGCTGCAAGCTCT...TGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACTTGTGTGACACCTCGCTGAGGTCCTaGAGCAGAGCTTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: ALQQRIHRAAQMEADLCDTSLRS*SRACSR
Trigger: GCGGCTGCAAGCTCTGCTGCAGGACCTCAGCGAGGT...GTCACACAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GTGGATGAGCTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTCCTGAGCAACGTCCCTaGCAGGGCTGGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: VDELPLAVVGAEPASDIPPEQRP*QGWWVA
Trigger: TGCCACCCACCAGCCCTGGCAGGGACGTTGCTCAGG...AGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAGCTCATCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTCACGTGGGCCCGTATTaGCCAGGCCATTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: QELSVGKTLLGQRARRPRHVGPY*PGHLAV
Trigger: CACTGCCAAATGGCCTGGGCAATACGGGCCCACGTG...ACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTGTTGCCCTCACGCGTAGAAGCAACTaGAGGCAGGCGGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: LPLAVVGAEPASDIPVALTRRSN*RQAARD
Trigger: GTCCCTGGCCGCCTGCCTGCAGTTGCTTCTACGCGT...GAGGGCAACAGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578616.5
CDS-3UTR GCA 90 bp GAGGCTGAGCGCTGCGGGCTGGATGTGCTGAACCATGACCGGGTGGATGAGCTTACCTGGAAGTGTGAGTaGTGGGTCCAGGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: EAERCGLDVLNHDRVDELTWKCE*WVQGAG
Trigger: CCCCGCACCCTGGACCCAGCACTCACACTTCCAGGT...AAGCTCATCCACCCGGTCATGGTTCAGCACATCCAGCCCGCAGCGCTCAGCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR GCA 90 bp CAGGCACCAGCGTGGACGAATCTCCGACTTGGTGTTCATGGAAATGCTTGCTGCGGGTTCCCCGGTGCCTaGCCCTGCCCATGGGTCCCG +
Preference number: 4 (lower is better)
Translates to: QAPAWTNLRLGVHGNACCGFPGA*PCPWVP
Trigger: CGGGACCCATGGGCAGGGGCAGGCACCGGGGAACCC...GCAGCAAGCATTTCCATGAACACCAAGTCGGAGATTCGTCCACGCTGGTGCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583354.5
CDS-3UTR CCA 90 bp CCGATGTGCAGCCGCTGGGCGCCTGGGTGTAGCTCCAGGACCTGGTCAATCATGGGCTGTAGGCGTACTTaGCCCTCAGCAGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: PMCSRWAPGCSSRTWSIMGCRRT*PSAASE
Trigger: CTCTGAGGCTGCTGAGGGCCAAGTACGCCTACAGCC...CATGATTGACCAGGTCCTGGAGCTACACCCAGGCGCCCAGCGGCTGCACATCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581482.5
CDS-3UTR CCA 90 bp CCCTTGAAGGCACTGGCTGCCCACAGCTGCGGAAAGCCGCACCGCCGGTACTTCTGTAGCTCCAGGACCTaGTCAATCATGGCGCCCACC +
Preference number: 4 (lower is better)
Translates to: PLKALAAHSCGKPHRRYFCSSRT*SIMAPT
Trigger: GGTGGGCGCCATGATTGACCAGGTCCTGGAGCTACA...GAAGTACCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAGTGCCTTCAAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR CCA 90 bp AGGCTGACTTGTGTGACAAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCTGGGCAAGACACTGCTaGGCCAGAGGGCACGACGCC +
Preference number: 4 (lower is better)
Translates to: RLTCVTRARMLLPGKEPAWARHC*ARGHDA
Trigger: GGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCA...GGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTCACACAAGTCAGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp GTGGATGAGCTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTTGGCGGATGGGGCCGTaGGCAAGGGACACGCGTAGA +
Preference number: 4 (lower is better)
Translates to: VDELPLAVVGAEPASDIPWRMGP*ARDTRR
Trigger: TCTACGCGTGTCCCTTGCCCACGGCCCCATCCGCCA...AGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAGCTCATCCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578616.5
CDS-3UTR CCA 90 bp GGTGCACGTTTTCCTCCAGCCACTCCTCCACGGCATCCGGGTAGAAAGCCAGCTACCTGCTCGGCCAGGTaGGCAGGACGTGTGTGCAGC +
Preference number: 4 (lower is better)
Translates to: GARFPPATPPRHPGRKPATCSAR*AGRVCS
Trigger: GCTGCACACACGTCCTGCCCACCTGGCCGAGCAGGT...AGCTGGCTTTCTACCCGGATGCCGTGGAGGAGTGGCTGGAGGAAAACGTGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR CCA 90 bp CTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTGTTGCCCTCTGGAAGTGTGAGTGCTaGGTCCAGGGTGCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: LPLAVVGAEPASDIPVALWKCEC*VQGAGP
Trigger: AGGCCCCGCACCCTGGACCCAGCACTCACACTTCCA...GAGGGCAACAGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR CCA 90 bp AAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACAGGGTCCGTTTTCACACACAGCTCCTCTaGCCAAGCCCCCTGCCGACC +
Preference number: 4 (lower is better)
Translates to: KDVAAREGAGPLPNRVRFHTQLL*PSPLPT
Trigger: GGTCGGCAGGGGGCTTGGCCAGAGGAGCTGTGTGTG...AAAACGGACCCTGTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000583354.5
CDS-3UTR TCA 90 bp TGTGACAAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACGCCGGTACTTCTGCATaGGGAGGACCTTGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: CDKGKDVAAREGAGPLPNAGTSA*GGPCRA
Trigger: TGCACGGCAAGGTCCTCCTCATGCAGAAGTACCGGC...GTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp CGGGTGGATGAGCTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATAACTGCACGTGGTTCCTaGGGTGGTGCTCAACAGGGG +
Preference number: 4 (lower is better)
Translates to: RVDELPLAVVGAEPASDITARGS*GGAQQG
Trigger: CCCCTGTTGAGCACCACCTCAGGAACCACGTGCAGT...TATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAGCTCATCCACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp GCTGACTTGTGTGACAAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCACTGCACGTGGTTCCTaGGGTGGTGCTCAACAGGGG +
Preference number: 4 (lower is better)
Translates to: ADLCDKGKDVAAREGAGPTARGS*GGAQQG
Trigger: CCCCTGTTGAGCACCACCTCAGGAACCACGTGCAGT...GGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTCACACAAGTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp AGTGACATACCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGCTTGCTGCAAGAGGCTaGCGGCCAGAGGGCAGGAGG +
Preference number: 4 (lower is better)
Translates to: SDIPVALQQRIHRAAQMELAARG*RPEGRR
Trigger: CCTCCTGCCCTCTGGCCGTCAGCCTCTTGCAGCAAG...CTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGGTATGTCACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR GCA 90 bp CATCTTCATCAAATCCTCCGGCCGCGTCCCCGTCCCTGGGCCGCCGCGCCTGCGATGTGTCCAAATGTCTaGACCAAGGGAATCACCTCC +
Preference number: 4 (lower is better)
Translates to: HLHQILRPRPRPWAAAPAMCPNV*TKGITS
Trigger: GGAGGTGATTCCCTTGGTGCAGACATTTGGACACAT...CGCAGGCGCGGCGGCCCAGGGACGGGGACGCGGCCGGAGGATTTGATGAAGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS-3UTR GCA 90 bp CCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACTTGGTGCTGTTCTGCTCTTaGTGTAGCCACCGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: PVALQQRIHRAAQMEADLVLFCS*CSHRRE
Trigger: CTCGCGCCGGTGGCTACAGCAAGAGCAGAACAGCAC...CAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCAGAGCGGCACAACTTCCCCGTaGTGTTCTGCTCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: GHDAHVGPYCPGHLAVQSGTTSP*CSALAV
Trigger: TACAGCAAGAGCAGAACAGCACGGGGAAGTTGTGCC...GCTCTGCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp TTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACTTGTGTGTGGTTCCTGAGGTGGTaGTCAACAGGGGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: LPSSSASTELRRWRLTCVWFLRW*STGGTA
Trigger: GGCCGTGCCCCCTGTTGAGCACCACCTCAGGAACCA...CACACAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp AATCCTCCCATGAGGCCTGCAGGCACCAGCGTGGACGAATCTCCGACTTGGTGTGCTCCTGCACGAGGGTaGTCCACTGTGCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: NPPMRPAGTSVDESPTWCAPARG*STVPGG
Trigger: GCCTCCTGGCACAGTGGAGCACCCTCGTGCAGGAGC...ACACCAAGTCGGAGATTCGTCCACGCTGGTGCCTGCAGGCCTCATGGGAGGATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578616.5
CDS-3UTR GCA 90 bp CAGGCTGGGGTGCACGTTTTCCTCCAGCCACTCCTCCACGGCATCCGGGTAGAAAGAGCTTGCAGCCGCTaGAGGCTGGGGTGCACGTTT +
Preference number: 4 (lower is better)
Translates to: QAGVHVFLQPLLHGIRVERACSR*RLGCTF
Trigger: AAACGTGCACCCCAGCCTGCAGCGGCTGCAAGCTCT...TTCTACCCGGATGCCGTGGAGGAGTGGCTGGAGGAAAACGTGCACCCCAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp GTTCAGGGTGCAGGGGAAGGAGCCCACCTCCCGCAGGTGGGCGAAGGCCGTGTGCGGGTCTCCCTGTGCTaGTTCCTTCTGTGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: VQGAGEGAHLPQVGEGRVRVSLC*FLLCFL
Trigger: TAGAAAACACAGAAGGAAGCAGCACAGGGAGACCCG...CACACGGCCTTCGCCCACCTGCGGGAGGTGGGCTCCTTCCCCTGCACCCTGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS-3UTR GCA 90 bp GAACCAGCCAGTGACATACCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGTCCTCCCATGAGGCCTaGAGGCACCAGCGTGGACGA +
Preference number: 4 (lower is better)
Translates to: EPASDIPVALQQRIHRAASSHEA*RHQRGR
Trigger: TCGTCCACGCTGGTGCCTGCAGGCCTCATGGGAGGA...CGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGGTATGTCACTGGCTGGTTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR GCA 90 bp CGATGTGCAGCCGCTGGGCGCCTGGGTGTAGCTCCAGGACCTGGTCAATCATGGCCAAGATCGCACCACTaGACTCCAGCCTCTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RCAAAGRLGVAPGPGQSWPRSHH*TPASER
Trigger: CCTCTCAGAGGCTGGAGTGCAGTGGTGCGATCTTGG...CCATGATTGACCAGGTCCTGGAGCTACACCCAGGCGCCCAGCGGCTGCACATCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582315.5
CDS-3UTR GCA 90 bp GGGCGCCTGGGTGTAGCTCCAGGACCTGGTCAATCATGGCGCCCACCAGCGCCAAATGAGGAGGCCGTTTaGACCTCTGAGAGGTACGAG +
Preference number: 4 (lower is better)
Translates to: GRLGVAPGPGQSWRPPAPNEEAV*TSERYE
Trigger: CTCGTACCTCTCAGAGGTGCAAACGGCCTCCTCATT...TGGCGCTGGTGGGCGCCATGATTGACCAGGTCCTGGAGCTACACCCAGGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581482.5
CDS-3UTR GCA 90 bp GGGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCACCTCCGACCTGCGTaGATTTCTGCGGATTCACTG +
Preference number: 4 (lower is better)
Translates to: GPSGTECGQDTAGPEGTTHLRPA*ISADSL
Trigger: CAGTGAATCCGCAGAAATGCACGCAGGTCGGAGGTG...CGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR GCA 90 bp GACAAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACAGGTCCCCACCTCCGACCTaGGTGCATTTCTGCGGATTC +
Preference number: 4 (lower is better)
Translates to: DKGKDVAAREGAGPLPNRSPPPT*VHFCGF
Trigger: GAATCCGCAGAAATGCACGCAGGTCGGAGGTGGGGA...CCTGTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR CCA 90 bp CCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACTTGACGTGGTTCCTGAGGTaGTGCTCAACAGGGGGCACG +
Preference number: 4 (lower is better)
Translates to: PVALQQRIHRAAQMEADLTWFLR*CSTGGT
Trigger: CGTGCCCCCTGTTGAGCACCACCTCAGGAACCACGT...CAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp CCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTGTTGCCCTCCAGTGCAGCCACTGCACGTaGTTCCTGAGGTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: PLAVVGAEPASDIPVALQCSHCT*FLRWCS
Trigger: TGAGCACCACCTCAGGAACCACGTGCAGTGGCTGCA...CTGGAGGGCAACAGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp GCGCCTGCGGGTCCCGCTCTCCGCGCGTCTCGGCCATTTTTCTTTCTGCATCAGCTGCAGGCACCAGCGTaGACGAATCTCCGACTTGGT +
Preference number: 4 (lower is better)
Translates to: APAGPALRASRPFFFLHQLQAPA*TNLRLG
Trigger: ACCAAGTCGGAGATTCGTCCACGCTGGTGCCTGCAG...CTGATGCAGAAAGAAAAATGGCCGAGACGCGCGGAGAGCGGGACCCGCAGGCGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583354.5
CDS-3UTR CCA 90 bp AGGCTGACTTGTGTGACAAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCTGGAAGTGTGAGTGCTaGGTCCAGGGTGCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: RLTCVTRARMLLPGKEPAWKCEC*VQGAGP
Trigger: AGGCCCCGCACCCTGGACCCAGCACTCACACTTCCA...GGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTCACACAAGTCAGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000583354.5
CDS-3UTR TCA 90 bp GTTCAGGGTGCAGGGGAAGGAGCCCACCTCCCGCAGGTGGGCGAAGGCCGTGTGGATGCAAGATCTCTTTaGTTTCAGAGGGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: VQGAGEGAHLPQVGEGRVDARSL*FQRGCR
Trigger: CCTACAGCCCCTCTGAAATCAAAGAGATCTTGCATC...CACACGGCCTTCGCCCACCTGCGGGAGGTGGGCTCCTTCCCCTGCACCCTGAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581482.5
CDS-3UTR TCA 90 bp GTGGATGAGCTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTACTGCACGTGGTTCCTaGGGTGGTGCTCAACAGGGG +
Preference number: 4 (lower is better)
Translates to: VDELPLAVVGAEPASDIPTARGS*GGAQQG
Trigger: CCCCTGTTGAGCACCACCTCAGGAACCACGTGCAGT...AGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAGCTCATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp GCCGCTGGGCGCCTGGGTGTAGCTCCAGGACCTGGTCAATCATGGCGCCCACCATGTCTTCATACTCAATaGGGAGGCCGTTTGCACCTC +
Preference number: 4 (lower is better)
Translates to: AAGRLGVAPGPGQSWRPPCLHTQ*GGRLHL
Trigger: GAGGTGCAAACGGCCTCCTCATTGAGTATGAAGACA...TGGTGGGCGCCATGATTGACCAGGTCCTGGAGCTACACCCAGGCGCCCAGCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581482.5
CDS-3UTR GCA 90 bp CAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTTGGGCGAAGGCCGTGTaGTTCAGCACAAACTCCATG +
Preference number: 4 (lower is better)
Translates to: QELSVGKTLLGQRARRPRWAKAV*FSTNSM
Trigger: CATGGAGTTTGTGCTGAAGCACACGGCCTTCGCCCA...ACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR GCA 90 bp TCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCGAAGGCCGTGTaGTTCAGCACAAACTCCATG +
Preference number: 4 (lower is better)
Translates to: SGTECGQDTAGPEGTTPTWAKAV*FSTNSM
Trigger: CATGGAGTTTGTGCTGAAGCACACGGCCTTCGCCCA...CGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR GCA 90 bp GAACCAGCCAGTGACATACCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGGTGCTGTTCTGCTCTTaGTGTAGCCACCGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: EPASDIPVALQQRIHRAAVLFCS*CSHRRE
Trigger: CTCGCGCCGGTGGCTACAGCAAGAGCAGAACAGCAC...CGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGGTATGTCACTGGCTGGTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp AAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCACCGGCTCCACCAGCTaGGGCACCCCGGACGCTGCG +
Preference number: 4 (lower is better)
Translates to: KNQCHTCRSQSGSPCAASTGSTS*GTPDAA
Trigger: CGCAGCGTCCGGGGTGCCGCAGCTGGTGGAGCCGGT...GGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp GCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCGGGTCTCCCTGTGCTaGTTCCTTCTGTGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: ARGHDAHVGPYCPGHLAVRVSLC*FLLCFL
Trigger: TAGAAAACACAGAAGGAAGCAGCACAGGGAGACCCG...CACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
CDS-3UTR GCA 90 bp CAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGCGGGTCTCCCTGTGCTaGTTCCTTCTGTGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: QDTAGPEGTTPTWARIAQRVSLC*FLLCFL
Trigger: TAGAAAACACAGAAGGAAGCAGCACAGGGAGACCCG...CTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
CDS-3UTR GCA 90 bp TTTCCTCCAGCCACTCCTCCACGGCATCCGGGTAGAAAGCCAGCTGCAGGGCAGCGTCACTCTCCAGCCTaGTTTGGGCTTAGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: FPPATPPRHPGRKPAAGQRHSPA*FGLRPG
Trigger: TCCAGGCCTAAGCCCAAAGCAGGCTGGAGAGTGACG...CTGCCCTGCAGCTGGCTTTCTACCCGGATGCCGTGGAGGAGTGGCTGGAGGAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR GCA 90 bp ACTTTCGCTTTAACATCTTCATCAAATCCTCCGGCCGCGTCCCCGTCCCTGGGCGCCCATGGGTCCCGCTaGTCCCTCAGGAGACCTGGA +
Preference number: 4 (lower is better)
Translates to: TFALTSSSNPPAASPSLGAHGSR*SLRRPG
Trigger: TCCAGGTCTCCTGAGGGAGCAGCGGGACCCATGGGC...GCCCAGGGACGGGGACGCGGCCGGAGGATTTGATGAAGATGTTAAAGCGAAAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR CCA 90 bp CTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTGTTGCCCTCCAGCAGTGCAGCCACTGCACGTaGTTCCTGAGGTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: LAVVGAEPASDIPVALQQCSHCT*FLRWCS
Trigger: TGAGCACCACCTCAGGAACCACGTGCAGTGGCTGCA...CTGCTGGAGGGCAACAGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp TCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGGGCACGACGCCCACGTaGGCCCGTATTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: SVSHMQITKRVSLCCFLLGTTPT*ARIAQA
Trigger: GGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCC...CAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR TCA 90 bp GCGTGGACGAATCTCCGACTTGGTGTTCATGGAAATGCTTGCTGCAAGAGGCTGTCCCCTCAGGGGTCCTaGGCAACGTCCCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: AWTNLRLGVHGNACCKRLSPQGS*ATSLPG
Trigger: CCCTGGCAGGGACGTTGCTCAGGACCCCTGAGGGGA...CAGCCTCTTGCAGCAAGCATTTCCATGAACACCAAGTCGGAGATTCGTCCACGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578616.5
CDS-3UTR GCA 90 bp TGTAGCTCCAGGACCTGGTCAATCATGGCGCCCACCAGCGCCAGGGACTCTGCCGGCACAACTTCCCCGTaGTGTTCTGCTCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: CSSRTWSIMAPTSARDSAGTTSP*CSALAV
Trigger: TACAGCAAGAGCAGAACAGCACGGGGAAGTTGTGCC...GGCAGAGTCCCTGGCGCTGGTGGGCGCCATGATTGACCAGGTCCTGGAGCTACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR GCA 90 bp CAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTACCGGCTCCACCAGCTaGGGCACCCCGGACGCTGCG +
Preference number: 4 (lower is better)
Translates to: QRISVTHADHKAGLPVLLTGSTS*GTPDAA
Trigger: CGCAGCGTCCGGGGTGCCGCAGCTGGTGGAGCCGGT...AAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp AAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCCTGGCTGCCCACAGCTaGGGAAAGCCGCACCGCCGG +
Preference number: 4 (lower is better)
Translates to: KNQCHTCRSQSGSPCAASLAAHS*GKPHRR
Trigger: CCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAG...GGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp AGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGCCGCTGCCCGCCACCTaGAGCCACTGCACGTGGTTC +
Preference number: 4 (lower is better)
Translates to: SVTHADHKAGLPVLLPSVPLPAT*SHCTWF
Trigger: GAACCACGTGCAGTGGCTGCAGGTGGCGGGCAGCGG...CACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp AGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGCAGGGACGGGACTCCTaGGGGCAGCAGCTCGCACAG +
Preference number: 4 (lower is better)
Translates to: SVTHADHKAGLPVLLPSVQGRDS*GQQLAQ
Trigger: CTGTGCGAGCTGCTGCCCGCAGGAGTCCCGTCCCTG...CACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp AATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCAGCCGGCCCCCTCCCTaGGGAGAGCCAGGGTCCGTT +
Preference number: 4 (lower is better)
Translates to: NQCHTCRSQSGSPCAASFSRPPP*GEPGSV
Trigger: AACGGACCCTGGCTCTCCGCAGGGAGGGGGCCGGCT...GAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577944.5
CDS-3UTR CCA 90 bp ATGTGCAGCCGCTGGGCGCCTGGGTGTAGCTCCAGGACCTGGTCAATCATGGCGTCCTGTGAACTCCTATaGCGAAGTCTCCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: MCSRWAPGCSSRTWSIMASCELL*RSLLGD
Trigger: GTCCCCAAGGAGACTTCGCCATAGGAGTTCACAGGA...CGCCATGATTGACCAGGTCCTGGAGCTACACCCAGGCGCCCAGCGGCTGCACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
CDS-3UTR CCA 90 bp AAGGTTCTCCACTTTCGCTTTAACATCTTCATCAAATCCTCCGGCCGCGTCCCCCCTGCAGTGAGTCCGTaGGCCCGCTGCCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: KVLHFRFNIFIKSSGRVPPAVSP*ARCPPP
Trigger: AGGTGGCGGGCAGCGGGCCCACGGACTCACTGCAGG...GGGGACGCGGCCGGAGGATTTGATGAAGATGTTAAAGCGAAAGTGGAGAACCTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp GACAAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACAGGACAGAGCTGCGCAGATaGAGGCTGACTTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: DKGKDVAAREGAGPLPNRTELRR*RLTCVT
Trigger: TGTCACACAAGTCAGCCTCCATCTGCGCAGCTCTGT...CCTGTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
ENST00000583354.5
CDS-3UTR CCA 90 bp GAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTGGCACGACGCCCACGTaGGCCCGTATTGCCCAGGCC +
Preference number: 4 (lower is better)
Translates to: ESVSHMQITKRVSLCCFLGTTPT*ARIAQA
Trigger: GGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCC...AAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
3UTR CAA 72 bp AGATGGAGGCTGACTTGTGTGACAAGGGCAAGGATGTaGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACA +
Preference number: 4 (lower is better)
Translates to: RWRLTCVTRARM*LPGKEPAPSLT
Trigger: TGTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTCACACAAGTCAGCCTCCATCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
ENST00000583354.5
CDS-3UTR TCA 90 bp ACTTTCGCTTTAACATCTTCATCAAATCCTCCGGCCGCGTCCCCGTCCCTGGGCGCCGGTACTTCTGCATaGGGAGGACCTTGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: TFALTSSSNPPAASPSLGAGTSA*GGPCRA
Trigger: TGCACGGCAAGGTCCTCCTCATGCAGAAGTACCGGC...GCCCAGGGACGGGGACGCGGCCGGAGGATTTGATGAAGATGTTAAAGCGAAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp CACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTTTTCGATGATGCCCTGCAGTaGGTCCGTGGGCCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: HTCRSQSGSPCAASFCVFDDALQ*VRGPAA
Trigger: GGCAGCGGGCCCACGGACTCACTGCAGGGCATCATC...GAAAACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR TCA 90 bp GTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTTTGATGATGCCCTGCAGTaGGTCCGTGGGCCCGCTGCC +
Preference number: 4 (lower is better)
Translates to: VTHADHKAGLPVLLPSVFDDALQ*VRGPAA
Trigger: GGCAGCGGGCCCACGGACTCACTGCAGGGCATCATC...AAACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp GCCCAGGGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCAATGTGTCCAAATGTCTaGACCAAGGGAATCACCTCC +
Preference number: 4 (lower is better)
Translates to: AQGPQELSVGKTLLGQRAMCPNV*TKGITS
Trigger: GGAGGTGATTCCCTTGGTGCAGACATTTGGACACAT...TGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCCTGGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR GCA 90 bp GATGAGCTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTGTTTTCCCCGTGCTGTTCTaGTCTTGCTGTAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: DELPLAVVGAEPASDIPVFPVLF*SCCSHR
Trigger: CCGGTGGCTACAGCAAGAGCAGAACAGCACGGGGAA...AACAGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAGCTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CGGGTGGATGAGCTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATAGGCACAACTTCCCCGTaGTGTTCTGCTCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: RVDELPLAVVGAEPASDIGTTSP*CSALAV
Trigger: TACAGCAAGAGCAGAACAGCACGGGGAAGTTGTGCC...TATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAGCTCATCCACCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp ACTTGGTGTTCATGGAAATGCTTGCTGCAAGAGGCTGACGGCCAGAGGGCAGGATGGTTCCTGAGGTGGTaGTCAACAGGGGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: TWCSWKCLLQEADGQRAGWFLRW*STGGTA
Trigger: GGCCGTGCCCCCTGTTGAGCACCACCTCAGGAACCA...TCCTGCCCTCTGGCCGTCAGCCTCTTGCAGCAAGCATTTCCATGAACACCAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578616.5
CDS-3UTR GCA 90 bp TCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGCCGCGTAGAAGCAACTaGAGGCAGGCGGCCAGGGAC +
Preference number: 4 (lower is better)
Translates to: SVSHMQITKRVSLCCFLLPRRSN*RQAARD
Trigger: GTCCCTGGCCGCCTGCCTGCAGTTGCTTCTACGCGG...CAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp GCAGAGCTTGCAGCCGCTGCAGGCTGGGGTGCACGTTTTCCTCCAGCCACTCCTACCTGCGTGCATTTCTaGGGATTCACTGTGTCTGAG +
Preference number: 4 (lower is better)
Translates to: AELAAAAGWGARFPPATPTCVHF*GFTVSE
Trigger: CTCAGACACAGTGAATCCGCAGAAATGCACGCAGGT...AGGAGTGGCTGGAGGAAAACGTGCACCCCAGCCTGCAGCGGCTGCAAGCTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR GCA 90 bp AGTGACATACCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGTGGGCAGGACGTGTGTaGAGCAAAGGTGGAGCCGTT +
Preference number: 4 (lower is better)
Translates to: SDIPVALQQRIHRAAQMEWAGRV*SKGGAV
Trigger: AACGGCTCCACCTTTGCTGCACACACGTCCTGCCCA...CTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGGTATGTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000583354.5
CDS-3UTR CCA 90 bp GACTTGTGTGACAAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCTCCTGTGAACTCCTATaGCGAAGTCTCCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: DLCDKGKDVAAREGAGPLSCELL*RSLLGD
Trigger: GTCCCCAAGGAGACTTCGCCATAGGAGTTCACAGGA...GAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTCACACAAGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS-3UTR CCA 90 bp AGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGAGGGACTCTGCCTCGTaGGGGTTCAGGGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: SVTHADHKAGLPVLLPSVRDSAS*GFRVQG
Trigger: CCCCTGCACCCTGAACCCCCACGAGGCAGAGTCCCT...CACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CCA 90 bp CAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGGACCTGGTCAATCATaGCGCCCACCAGCGCCAGGG +
Preference number: 4 (lower is better)
Translates to: QCHTCRSQSGSPCAASFCGPGQS*RPPAPG
Trigger: CCCTGGCGCTGGTGGGCGCCATGATTGACCAGGTCC...ACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CCA 90 bp ATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCCCAGGGGTGTCACGCTaGGGCGCCGGGCCTTCACGC +
Preference number: 4 (lower is better)
Translates to: ISKESVSHMQITKRVSLCPGVSR*GAGPSR
Trigger: GCGTGAAGGCCCGGCGCCCCAGCGTGACACCCCTGG...GCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR CCA 90 bp TCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTTTTCCTGCAGTGAGTCCGTaGGCCCGCTGCCCGCCACCT +
Preference number: 4 (lower is better)
Translates to: SHMQITKRVSLCCFLLCFPAVSP*ARCPPP
Trigger: AGGTGGCGGGCAGCGGGCCCACGGACTCACTGCAGG...AAAACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CCA 90 bp GCTGACTTGTGTGACAAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCACAGAGCTGCGCAGATaGAGGCTGACTTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: ADLCDKGKDVAAREGAGPTELRR*RLTCVT
Trigger: TGTCACACAAGTCAGCCTCCATCTGCGCAGCTCTGT...GGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTCACACAAGTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
ENST00000583354.5
CDS-3UTR CCA 90 bp AGGTTCTCCACTTTCGCTTTAACATCTTCATCAAATCCTCCGGCCGCGTCCCCGTGGGCAAGACACTGCTaGGCCAGAGGGCACGACGCC +
Preference number: 4 (lower is better)
Translates to: RFSTFALTSSSNPPAASPWARHC*ARGHDA
Trigger: GGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCA...CGGGGACGCGGCCGGAGGATTTGATGAAGATGTTAAAGCGAAAGTGGAGAACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp CTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCTTTCAATATTTCCTGTaGACTCCTATGGCGAAGTCT +
Preference number: 4 (lower is better)
Translates to: LSVGKTLLGQRARRPRGPFQYFL*TPMAKS
Trigger: AGACTTCGCCATAGGAGTTCACAGGAAATATTGAAA...GGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR TCA 90 bp GCTCTTGCTGTAGCCACCGGCGCGAGGCCTCCCCCTCTCCGAGGTAATAGACCTCAGAGGAAAAATCTCTaGGAGGTACGAGACCTTTGG +
Preference number: 4 (lower is better)
Translates to: ALAVATGARPPPLRGNRPQRKNL*EVRDLW
Trigger: CCAAAGGTCTCGTACCTCTCAGAGATTTTTCCTCTG...AGGTCTATTACCTCGGAGAGGGGGAGGCCTCGCGCCGGTGGCTACAGCAAGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS-3UTR TCA 90 bp CAGGGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGAGATGCAAGATCTCTTTaGTTTCAGAGGGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: QGPQELSVGKTLLGQRARDARSL*FQRGCR
Trigger: CCTACAGCCCCTCTGAAATCAAAGAGATCTTGCATC...TCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000327949.15
CDS-3UTR TCA 90 bp CAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTCACCGCCCGCATGTGTaGCAGGCACAACTTCCCCGT +
Preference number: 4 (lower is better)
Translates to: QCHTCRSQSGSPCAASFCHRPHV*QAQLPR
Trigger: ACGGGGAAGTTGTGCCTGTCACACATGCGGGCGGTG...ACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR TCA 90 bp TTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGGCCCCGTGGCACCCTTaGAGGCACTGGCTGCCCACA +
Preference number: 4 (lower is better)
Translates to: FQRISVTHADHKAGLPVLAPWHP*RHWLPT
Trigger: TGTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGC...CAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR TCA 90 bp GAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTGCCAGCCGGTCAGGATaGTGCCCTGCAGTGAGTCCG +
Preference number: 4 (lower is better)
Translates to: ESVSHMQITKRVSLCCFLASRSG*CPAVSP
Trigger: CGGACTCACTGCAGGGCATCATCCTGACCGGCTGGC...AAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR TCA 90 bp AGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGGCGGGCTGGATGTGCTaGACCATGACCGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: SVTHADHKAGLPVLLPSVAGWMC*TMTGWM
Trigger: CATCCACCCGGTCATGGTTCAGCACATCCAGCCCGC...CACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp CGATGTGCAGCCGCTGGGCGCCTGGGTGTAGCTCCAGGACCTGGTCAATCATGGATGTGTCCAAATGTCTaGACCAAGGGAATCACCTCC +
Preference number: 4 (lower is better)
Translates to: RCAAAGRLGVAPGPGQSWMCPNV*TKGITS
Trigger: GGAGGTGATTCCCTTGGTGCAGACATTTGGACACAT...CCATGATTGACCAGGTCCTGGAGCTACACCCAGGCGCCCAGCGGCTGCACATCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
CDS-3UTR GCA 90 bp TGGTCCTCAGGCAGGTCTCGGAGCATGTCGTCCCACACCAGGGGTGTCACGCTGATGTGTCCAAATGTCTaGACCAAGGGAATCACCTCC +
Preference number: 4 (lower is better)
Translates to: WSSGRSRSMSSHTRGVTLMCPNV*TKGITS
Trigger: GGAGGTGATTCCCTTGGTGCAGACATTTGGACACAT...CAGCGTGACACCCCTGGTGTGGGACGACATGCTCCGAGACCTGCCTGAGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR GCA 90 bp AGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCATCACACCCGATGTaGAGCCGCTGGGCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: RISVTHADHKAGLPVLLPSSHPM*SRWAPG
Trigger: CCCAGGCGCCCAGCGGCTGCACATCGGGTGTGATGA...AGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp GTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTTGGTTCCTGAGGTGGTaGTCAACAGGGGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: VSHMQITKRVSLCCFLLCWFLRW*STGGTA
Trigger: GGCCGTGCCCCCTGTTGAGCACCACCTCAGGAACCA...ACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp TTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCCGCTGCCCGCCACCTaGAGCCACTGCACGTGGTTC +
Preference number: 4 (lower is better)
Translates to: FQRISVTHADHKAGLPVLPLPAT*SHCTWF
Trigger: GAACCACGTGCAGTGGCTGCAGGTGGCGGGCAGCGG...CAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp ATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGAGGGTGCTCCACTGTaGCAGGAGGCTGAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: ISVTHADHKAGLPVLLPSEGAPL*QEAERC
Trigger: GCAGCGCTCAGCCTCCTGGCACAGTGGAGCACCCTC...AGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp CCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTGAGGGTGCTCCACTGTaGCAGGAGGCTGAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: PKNQCHTCRSQSGSPCAAEGAPL*QEAERC
Trigger: GCAGCGCTCAGCCTCCTGGCACAGTGGAGCACCCTC...AGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp CCCGAGAAGGTTCTCCACTTTCGCTTTAACATCTTCATCAAATCCTCCGGCCGCGAGGGTGCTCCACTGTaGCAGGAGGCTGAGCGCTGC +
Preference number: 4 (lower is better)
Translates to: PEKVLHFRFNIFIKSSGREGAPL*QEAERC
Trigger: GCAGCGCTCAGCCTCCTGGCACAGTGGAGCACCCTC...GCGGCCGGAGGATTTGATGAAGATGTTAAAGCGAAAGTGGAGAACCTTCTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp AAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCCCTGAGCAACGTCCCTaGCAGGGCTGGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: KNQCHTCRSQSGSPCAASPEQRP*QGWWVA
Trigger: TGCCACCCACCAGCCCTGGCAGGGACGTTGCTCAGG...GGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp CCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTCCTGAGCAACGTCCCTaGCAGGGCTGGTGGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PKNQCHTCRSQSGSPCAAPEQRP*QGWWVA
Trigger: TGCCACCCACCAGCCCTGGCAGGGACGTTGCTCAGG...AGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp AGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGGTGTGGGCAAGACACTaGTGGGCCAGAGGGCACGAC +
Preference number: 4 (lower is better)
Translates to: SVTHADHKAGLPVLLPSVVWARH*WARGHD
Trigger: GTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACAC...CACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp CAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCTCTCCCCCAGGGGCTaGCCAGGGCCCTCAGGAACT +
Preference number: 4 (lower is better)
Translates to: QRISVTHADHKAGLPVLLLSPRG*PGPSGT
Trigger: AGTTCCTGAGGGCCCTGGGCAGCCCCTGGGGGAGAG...AAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp GTGACAAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTAACAGGCCATTTTTCTTTCTaGATCAGCACCACGCAGTCG +
Preference number: 4 (lower is better)
Translates to: VTRARMLLPGKEPAPSLTGHFSF*ISTTQS
Trigger: CGACTGCGTGGTGCTGATGCAGAAAGAAAAATGGCC...TGTTAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000583354.5
CDS-3UTR CCA 90 bp GAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTAGGGACTCTGCCTCGTaGGGGTTCAGGGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: ESVSHMQITKRVSLCCFLRDSAS*GFRVQG
Trigger: CCCCTGCACCCTGAACCCCCACGAGGCAGAGTCCCT...AAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CCA 90 bp CACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTTTTCAGGGACTCTGCCTCGTaGGGGTTCAGGGTGCAGGGG +
Preference number: 4 (lower is better)
Translates to: HTCRSQSGSPCAASFCVFRDSAS*GFRVQG
Trigger: CCCCTGCACCCTGAACCCCCACGAGGCAGAGTCCCT...GAAAACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR CCA 90 bp TCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTTTTCCGATGTGCAGCCGCTaGGCGCCTGGGTGTAGCTCC +
Preference number: 4 (lower is better)
Translates to: SHMQITKRVSLCCFLLCFPMCSR*APGCSS
Trigger: GGAGCTACACCCAGGCGCCCAGCGGCTGCACATCGG...AAAACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CCA 90 bp ATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCGGGCCTTCACGCCGCTaGCCACCGCCCGCATGTGTG +
Preference number: 4 (lower is better)
Translates to: ISKESVSHMQITKRVSLCGPSRR*PPPACV
Trigger: CACACATGCGGGCGGTGGCCAGCGGCGTGAAGGCCC...GCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR CCA 90 bp AAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCCGGACGCTGCGAGCTaGTCCTCAGGCAGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: KESVSHMQITKRVSLCCFPDAAS*SSGRSR
Trigger: CCGAGACCTGCCTGAGGACCAGCTCGCAGCGTCCGG...GAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CCA 90 bp AATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGGGCAAGACACTGCTaGGCCAGAGGGCACGACGCC +
Preference number: 4 (lower is better)
Translates to: NQCHTCRSQSGSPCAASFWARHC*ARGHDA
Trigger: GGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCA...GAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CCA 90 bp CTCCACTTTCGCTTTAACATCTTCATCAAATCCTCCCATGAGGCCTGCAGGCACGTCACGGGTGGCGGATaGGGCCGTGGGCAAGGGACA +
Preference number: 4 (lower is better)
Translates to: LHFRFNIFIKSSHEACRHVTGGG*GRGQGT
Trigger: TGTCCCTTGCCCACGGCCCCATCCGCCACCCGTGAC...GTGCCTGCAGGCCTCATGGGAGGATTTGATGAAGATGTTAAAGCGAAAGTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
3UTR CAA 72 bp GTGGACGAATCTCCGACTTGGTGTTCATGGAAATGCTaGCTGCAAGAGGCTGACGGCCAGAGGGCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: VDESPTWCSWKC*LQEADGQRAGG
Trigger: CCCTCCTGCCCTCTGGCCGTCAGCCTCTTGCAGCAAGCATTTCCATGAACACCAAGTCGGAGATTCGTCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR TCA 90 bp GGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCAGAGCTTTCAATATTTCCTGTaGACTCCTATGGCGAAGTCT +
Preference number: 4 (lower is better)
Translates to: GHDAHVGPYCPGHLAVQSFQYFL*TPMAKS
Trigger: AGACTTCGCCATAGGAGTTCACAGGAAATATTGAAA...GCTCTGCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR TCA 90 bp GAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTAAATGGAGTGGAACCTaGCATTTCAATATTTCCTGT +
Preference number: 4 (lower is better)
Translates to: ECGQDTAGPEGTTPTWARKWSGT*HFNISC
Trigger: ACAGGAAATATTGAAATGTCAGGTTCCACTCCATTT...ACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR TCA 90 bp AAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCCACCGCCCGCATGTGTaGCAGGCACAACTTCCCCGT +
Preference number: 4 (lower is better)
Translates to: KNQCHTCRSQSGSPCAASHRPHV*QAQLPR
Trigger: ACGGGGAAGTTGTGCCTGTCACACATGCGGGCGGTG...GGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR TCA 90 bp GTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTACTGCACGTGGTTCCTaGGGTGGTGCTCAACAGGGG +
Preference number: 4 (lower is better)
Translates to: VSHMQITKRVSLCCFLLCTARGS*GGAQQG
Trigger: CCCCTGTTGAGCACCACCTCAGGAACCACGTGCAGT...ACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR TCA 90 bp AATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCGCGGGCTGGATGTGCTaGACCATGACCGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: NQCHTCRSQSGSPCAASFAGWMC*TMTGWM
Trigger: CATCCACCCGGTCATGGTTCAGCACATCCAGCCCGC...GAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR TCA 90 bp AAGGTTCTCCACTTTCGCTTTAACATCTTCATCAAATCCTCCGGCCGCGTCCCCGCGGGCTGGATGTGCTaGACCATGACCGGGTGGATG +
Preference number: 4 (lower is better)
Translates to: KVLHFRFNIFIKSSGRVPAGWMC*TMTGWM
Trigger: CATCCACCCGGTCATGGTTCAGCACATCCAGCCCGC...GGGGACGCGGCCGGAGGATTTGATGAAGATGTTAAAGCGAAAGTGGAGAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR TCA 90 bp ATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTCCCCTCAGGGGTCCTaGGCAACGTCCCTGCCAGGG +
Preference number: 4 (lower is better)
Translates to: ISKESVSHMQITKRVSLCSPQGS*ATSLPG
Trigger: CCCTGGCAGGGACGTTGCTCAGGACCCCTGAGGGGA...GCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR TCA 90 bp CCCGAGAAGGTTCTCCACTTTCGCTTTAACATCTTCATCAAATCCTCCGGCCGCCGGATTCACTGTGTCTaGGGGGTGCCTCCCGCGTCA +
Preference number: 4 (lower is better)
Translates to: PEKVLHFRFNIFIKSSGRRIHCV*GVPPAS
Trigger: TGACGCGGGAGGCACCCCTCAGACACAGTGAATCCG...GCGGCCGGAGGATTTGATGAAGATGTTAAAGCGAAAGTGGAGAACCTTCTCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS-3UTR TCA 90 bp AGCGTGGACGAATCTCCGACTTGGTGTTCATGGAAATGCTTGCTGCAAGAGGCTGGAGACCTGGAAGTGTaGGTGCTGGGTCCAGGGTGC +
Preference number: 4 (lower is better)
Translates to: SVDESPTWCSWKCLLQEAGDLEV*VLGPGC
Trigger: GCACCCTGGACCCAGCACTCACACTTCCAGGTCTCC...AGCCTCTTGCAGCAAGCATTTCCATGAACACCAAGTCGGAGATTCGTCCACGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583354.5
CDS-3UTR GCA 90 bp GCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCATTGAGTCCAGCCAGATaGAAGATCTCTTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: ARHCWARGHDAHVGPYCPLSPAR*KISLIS
Trigger: TGAAATCAAAGAGATCTTGCATCTGGCTGGACTCAA...TGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR GCA 90 bp CAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTTCATCACACCCGATGTaGAGCCGCTGGGCGCCTGGG +
Preference number: 4 (lower is better)
Translates to: QRISVTHADHKAGLPVLLSSHPM*SRWAPG
Trigger: CCCAGGCGCCCAGCGGCTGCACATCGGGTGTGATGA...AAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp GTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTGTGCTGTTCTGCTCTTaGTGTAGCCACCGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: VSHMQITKRVSLCCFLLCVLFCS*CSHRRE
Trigger: CTCGCGCCGGTGGCTACAGCAAGAGCAGAACAGCAC...ACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp GAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTAGGAGGACCTTGCCGTaGACATCCAGGTCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: ESVSHMQITKRVSLCCFLRRTLP*TSRSAV
Trigger: CACGGCCGACCTGGATGTGCACGGCAAGGTCCTCCT...AAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp TCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTGGTTCCTGAGGTGGTaGTCAACAGGGGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: SKESVSHMQITKRVSLCCWFLRW*STGGTA
Trigger: GGCCGTGCCCCCTGTTGAGCACCACCTCAGGAACCA...GCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp GAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTGCCACCTGCAGCCACTaGACGTGGTTCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: ESVSHMQITKRVSLCCFLATCSH*TWFLRW
Trigger: CCACCTCAGGAACCACGTGCAGTGGCTGCAGGTGGC...AAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp AATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCCAGGAGGCTGAGCGCTaGGGGCTGGATGTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: NQCHTCRSQSGSPCAASFQEAER*GLDVLN
Trigger: GTTCAGCACATCCAGCCCGCAGCGCTCAGCCTCCTG...GAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp TCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTTTTGCTCCTGCACGAGGGTaGTCCACTGTGCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: SHMQITKRVSLCCFLLCFAPARG*STVPGG
Trigger: GCCTCCTGGCACAGTGGAGCACCCTCGTGCAGGAGC...AAAACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp GAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTGCAGCCTCCAGCTCCTaGACGAGGGTGCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: ESVSHMQITKRVSLCCFLAASSS*TRVLHC
Trigger: ACAGTGGAGCACCCTCGTGCAGGAGCTGGAGGCTGC...AAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp AATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCCGCTGCAGGCTGGGGTaGACGTTTTCCTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: NQCHTCRSQSGSPCAASFRCRLG*TFSSSH
Trigger: GTGGCTGGAGGAAAACGTGCACCCCAGCCTGCAGCG...GAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp AAGGTTCTCCACTTTCGCTTTAACATCTTCATCAAATCCTCCGGCCGCGTCCCCCGCTGCAGGCTGGGGTaGACGTTTTCCTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: KVLHFRFNIFIKSSGRVPRCRLG*TFSSSH
Trigger: GTGGCTGGAGGAAAACGTGCACCCCAGCCTGCAGCG...GGGGACGCGGCCGGAGGATTTGATGAAGATGTTAAAGCGAAAGTGGAGAACCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp TCAAATCCTCCCATGAGGCCTGCAGGCACCAGCGTGGACGAATCTCCGACTTGGCATGGAAATGCTTGCTaGAAGAGGCTGACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: SNPPMRPAGTSVDESPTWHGNAC*KRLTAR
Trigger: TCTGGCCGTCAGCCTCTTGCAGCAAGCATTTCCATG...CCAAGTCGGAGATTCGTCCACGCTGGTGCCTGCAGGCCTCATGGGAGGATTTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR GCA 90 bp TTTCCTCCAGCCACTCCTCCACGGCATCCGGGTAGAAAGCCAGCTGCAGGGCAGTGGTGTTCATGGAAATaGTTGCTGCAAGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: FPPATPPRHPGRKPAAGQWCSWK*LLQEAD
Trigger: GTCAGCCTCTTGCAGCAAGCATTTCCATGAACACCA...CTGCCCTGCAGCTGGCTTTCTACCCGGATGCCGTGGAGGAGTGGCTGGAGGAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578616.5
CDS-3UTR CCA 90 bp AACCAGCCAGTGACATACCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCGAGGTACGAGACCTTTaGTGGAGCTCCTTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: NQPVTYLLPSSSASTELREVRDL*WSSFKV
Trigger: GACCTTAAAGGAGCTCCACCAAAGGTCTCGTACCTC...GCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGGTATGTCACTGGCTGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS-3UTR CCA 90 bp CAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGGCTGTAGGCGTACTTaGCCCTCAGCAGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: QCHTCRSQSGSPCAASFCGCRRT*PSAASE
Trigger: CTCTGAGGCTGCTGAGGGCCAAGTACGCCTACAGCC...ACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR CCA 90 bp AGTGACATACCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGACAGAGCTGCGCAGATaGAGGCTGACTTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: SDIPVALQQRIHRAAQMETELRR*RLTCVT
Trigger: TGTCACACAAGTCAGCCTCCATCTGCGCAGCTCTGT...CTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGGTATGTCACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
ENST00000583354.5
CDS-3UTR CCA 90 bp AATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCGCAGCCGCTGCAGGCTaGGGTGCACGTTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: NQCHTCRSQSGSPCAASFAAAAG*GARFPP
Trigger: TGGAGGAAAACGTGCACCCCAGCCTGCAGCGGCTGC...GAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR TCA 90 bp CCGTGTGCTTCAGCACAAACTCCATGTGTCCAAATGTCTGCACCAAGGGAATCACACCGCCCGCATGTGTaGCAGGCACAACTTCCCCGT +
Preference number: 4 (lower is better)
Translates to: PCASAQTPCVQMSAPRESHRPHV*QAQLPR
Trigger: ACGGGGAAGTTGTGCCTGTCACACATGCGGGCGGTG...TGATTCCCTTGGTGCAGACATTTGGACACATGGAGTTTGTGCTGAAGCACACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582315.5
CDS-3UTR TCA 90 bp ATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGCCGGTACTTCTGCATaGGGAGGACCTTGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: ISVTHADHKAGLPVLLPSAGTSA*GGPCRA
Trigger: TGCACGGCAAGGTCCTCCTCATGCAGAAGTACCGGC...AGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR TCA 90 bp ATGTGTCCAAATGTCTGCACCAAGGGAATCACCTCCAGCTCATTGAGTCCAGCCGCCGGTACTTCTGCATaGGGAGGACCTTGCCGTGCA +
Preference number: 4 (lower is better)
Translates to: MCPNVCTKGITSSSLSPAAGTSA*GGPCRA
Trigger: TGCACGGCAAGGTCCTCCTCATGCAGAAGTACCGGC...GGCTGGACTCAATGAGCTGGAGGTGATTCCCTTGGTGCAGACATTTGGACACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582315.5
CDS-3UTR TCA 90 bp AGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTACTGCACGTGGTTCCTaGGGTGGTGCTCAACAGGGG +
Preference number: 4 (lower is better)
Translates to: RISVTHADHKAGLPVLLPTARGS*GGAQQG
Trigger: CCCCTGTTGAGCACCACCTCAGGAACCACGTGCAGT...AGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR TCA 90 bp AGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTAGGGCCCTCAGGAACTaGGTGTGGGCAAGACACTGC +
Preference number: 4 (lower is better)
Translates to: RISVTHADHKAGLPVLLPRALRN*VWARHC
Trigger: GCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCCT...AGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR TCA 90 bp TCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGGATGCAAGATCTCTTTaGTTTCAGAGGGGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: SGTECGQDTAGPEGTTPTDARSL*FQRGCN
Trigger: ATTACAGCCCCTCTGAAATCAAAGAGATCTTGCATC...CGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS-3UTR TCA 90 bp GGCACAACTTCCCCGTGCTGTTCTGCTCTTGCTGTAGCCACCGGCGCGAGGCCTGATGCAAGATCTCTTTaGTTTCAGAGGGGCTGTAAT +
Preference number: 4 (lower is better)
Translates to: GTTSPCCSALAVATGARPDARSL*FQRGCN
Trigger: ATTACAGCCCCTCTGAAATCAAAGAGATCTTGCATC...AGGCCTCGCGCCGGTGGCTACAGCAAGAGCAGAACAGCACGGGGAAGTTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR GCA 90 bp CAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTAGGAGGACCTTGCCGTaGACATCCAGGTCGGCCGTG +
Preference number: 4 (lower is better)
Translates to: QRISVTHADHKAGLPVLLRRTLP*TSRSAV
Trigger: CACGGCCGACCTGGATGTGCACGGCAAGGTCCTCCT...AAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp CCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTCACCGCCGGTACTTCTaGATGAGGAGGACCTTGCCG +
Preference number: 4 (lower is better)
Translates to: PKNQCHTCRSQSGSPCAAHRRYF*MRRTLP
Trigger: CGGCAAGGTCCTCCTCATGCAGAAGTACCGGCGGTG...AGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp CATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTTTTCTAGTGCCACCTGCAGCCACTaGACGTGGTTCCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: HADHKAGLPVLLPSVFSSATCSH*TWFLRW
Trigger: CCACCTCAGGAACCACGTGCAGTGGCTGCAGGTGGC...ACTAGAAAACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR GCA 90 bp TTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTCCTGCACGAGGGTaGTCCACTGTGCCAGGAGGC +
Preference number: 4 (lower is better)
Translates to: FPKNQCHTCRSQSGSPCAAPARG*STVPGG
Trigger: GCCTCCTGGCACAGTGGAGCACCCTCGTGCAGGAGC...AGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp GTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTTTAGAGCTTGCAGCCGCTaGAGGCTGGGGTGCACGTTT +
Preference number: 4 (lower is better)
Translates to: VTHADHKAGLPVLLPSVFRACSR*RLGCTF
Trigger: AAACGTGCACCCCAGCCTGCAGCGGCTGCAAGCTCT...AAACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp CAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTACCTCGCTGAGGTCCTaGAGCAGAGCTTGCAGCCGC +
Preference number: 4 (lower is better)
Translates to: QRISVTHADHKAGLPVLLTSLRS*SRACSR
Trigger: GCGGCTGCAAGCTCTGCTGCAGGACCTCAGCGAGGT...AAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp TGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTTCACGTGGGCCCGTATTaGCCAGGCCATTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: CHTCRSQSGSPCAASFCVHVGPY*PGHLAV
Trigger: CACTGCCAAATGGCCTGGGCAATACGGGCCCACGTG...AACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CCA 90 bp GTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTTTACGTGGTTCCTGAGGTaGTGCTCAACAGGGGGCACG +
Preference number: 4 (lower is better)
Translates to: VTHADHKAGLPVLLPSVFTWFLR*CSTGGT
Trigger: CGTGCCCCCTGTTGAGCACCACCTCAGGAACCACGT...AAACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CCA 90 bp CTCCACTTTCGCTTTAACATCTTCATCAAATCCTCCCATGAGGCCTGCAGGCACGCAGCCGCTGCAGGCTaGGGTGCACGTTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LHFRFNIFIKSSHEACRHAAAAG*GARFPP
Trigger: TGGAGGAAAACGTGCACCCCAGCCTGCAGCGGCTGC...GTGCCTGCAGGCCTCATGGGAGGATTTGATGAAGATGTTAAAGCGAAAGTGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578616.5
CDS-3UTR TCA 90 bp AGGAGCCCACCTCCCGCAGGTGGGCGAAGGCCGTGTGCTTCAGCACAAACTCCATTTCAATATTTCCTGTaGACTCCTATGGCGAAGTCT +
Preference number: 4 (lower is better)
Translates to: RSPPPAGGRRPCASAQTPFQYFL*TPMAKS
Trigger: AGACTTCGCCATAGGAGTTCACAGGAAATATTGAAA...TGGAGTTTGTGCTGAAGCACACGGCCTTCGCCCACCTGCGGGAGGTGGGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578775.2
ENST00000581482.5
ENST00000582315.5
CDS-3UTR TCA 90 bp GCCCAGGGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCAAAATGGAGTGGAACCTaGCATTTCAATATTTCCTGT +
Preference number: 4 (lower is better)
Translates to: AQGPQELSVGKTLLGQRAKWSGT*HFNISC
Trigger: ACAGGAAATATTGAAATGTCAGGTTCCACTCCATTT...TGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCCTGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR GCA 90 bp TCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCCCGTGCTGTTCTaGTCTTGCTGTAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: SKESVSHMQITKRVSLCCFPVLF*SCCSHR
Trigger: CCGGTGGCTACAGCAAGAGCAGAACAGCACGGGGAA...GCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp CATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTTTTCTAGTCACCGCCGGTACTTCTaGATGAGGAGGACCTTGCCG +
Preference number: 4 (lower is better)
Translates to: HADHKAGLPVLLPSVFSSHRRYF*MRRTLP
Trigger: CGGCAAGGTCCTCCTCATGCAGAAGTACCGGCGGTG...ACTAGAAAACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR GCA 90 bp TTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGTCAGGATGATGCCCTaGAGTGAGTCCGTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: FPKNQCHTCRSQSGSPCAVRMMP*SESVGP
Trigger: CGGGCCCACGGACTCACTGCAGGGCATCATCCTGAC...AGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp ATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCGTCAGGATGATGCCCTaGAGTGAGTCCGTGGGCCCG +
Preference number: 4 (lower is better)
Translates to: ISKESVSHMQITKRVSLCVRMMP*SESVGP
Trigger: CGGGCCCACGGACTCACTGCAGGGCATCATCCTGAC...GCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp CAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTAGAGCTTGCAGCCGCTaGAGGCTGGGGTGCACGTTT +
Preference number: 4 (lower is better)
Translates to: QRISVTHADHKAGLPVLLRACSR*RLGCTF
Trigger: AAACGTGCACCCCAGCCTGCAGCGGCTGCAAGCTCT...AAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp ACTTGGTGTTCATGGAAATGCTTGCTGCAAGAGGCTGACGGCCAGAGGGCAGGAGTTCATGGAAATGCTTaGTGCAAGAGGCTGACGGCC +
Preference number: 4 (lower is better)
Translates to: TWCSWKCLLQEADGQRAGVHGNA*CKRLTA
Trigger: GGCCGTCAGCCTCTTGCAGCAAGCATTTCCATGAAC...TCCTGCCCTCTGGCCGTCAGCCTCTTGCAGCAAGCATTTCCATGAACACCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR GCA 90 bp AATCCTCCCATGAGGCCTGCAGGCACCAGCGTGGACGAATCTCCGACTTGGTGTTGGTGTTCATGGAAATaGTTGCTGCAAGAGGCTGAC +
Preference number: 4 (lower is better)
Translates to: NPPMRPAGTSVDESPTWCWCSWK*LLQEAD
Trigger: GTCAGCCTCTTGCAGCAAGCATTTCCATGAACACCA...ACACCAAGTCGGAGATTCGTCCACGCTGGTGCCTGCAGGCCTCATGGGAGGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR CCA 90 bp TCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCATGGCGAAGTCTCCTTaGGGACTTCTTCCTGCGCCG +
Preference number: 4 (lower is better)
Translates to: SKESVSHMQITKRVSLCCMAKSP*GLLPAP
Trigger: CGGCGCAGGAAGAAGTCCCCAAGGAGACTTCGCCAT...GCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR CCA 90 bp AAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCGGCTGTAGGCGTACTTaGCCCTCAGCAGCCTCAGAG +
Preference number: 4 (lower is better)
Translates to: KESVSHMQITKRVSLCCFGCRRT*PSAASE
Trigger: CTCTGAGGCTGCTGAGGGCCAAGTACGCCTACAGCC...GAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR CCA 90 bp CTCCACTTTCGCTTTAACATCTTCATCAAATCCTCCCATGAGGCCTGCAGGCACACGTGGTTCCTGAGGTaGTGCTCAACAGGGGGCACG +
Preference number: 4 (lower is better)
Translates to: LHFRFNIFIKSSHEACRHTWFLR*CSTGGT
Trigger: CGTGCCCCCTGTTGAGCACCACCTCAGGAACCACGT...GTGCCTGCAGGCCTCATGGGAGGATTTGATGAAGATGTTAAAGCGAAAGTGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578616.5
CDS-3UTR CCA 90 bp AATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGCAGCCACTGCACGTaGTTCCTGAGGTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: NQCHTCRSQSGSPCAASFCSHCT*FLRWCS
Trigger: TGAGCACCACCTCAGGAACCACGTGCAGTGGCTGCA...GAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CCA 90 bp ACTTGGTGTTCATGGAAATGCTTGCTGCAAGAGGCTGACGGCCAGAGGGCAGGAACAGAGCTGCGCAGATaGAGGCTGACTTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: TWCSWKCLLQEADGQRAGTELRR*RLTCVT
Trigger: TGTCACACAAGTCAGCCTCCATCTGCGCAGCTCTGT...TCCTGCCCTCTGGCCGTCAGCCTCTTGCAGCAAGCATTTCCATGAACACCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR CCA 90 bp AGGCTGACTTGTGTGACAAGGGCAAGGATGTTGCTGCCAGGGAAGGAGCCGGCCGACGAATCTCCGACTTaGTGTTCATGGAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: RLTCVTRARMLLPGKEPADESPT*CSWKCL
Trigger: CAAGCATTTCCATGAACACCAAGTCGGAGATTCGTC...GGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTCACACAAGTCAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR TCA 90 bp TATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGGGGCAGACACCTCGCTaGGGTCCTGCAGCAGAGCTT +
Preference number: 4 (lower is better)
Translates to: YFQRISVTHADHKAGLPVGQTPR*GPAAEL
Trigger: AAGCTCTGCTGCAGGACCTCAGCGAGGTGTCTGCCC...CACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp AAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTGGGCGAAGGCCGTGTaGTTCAGCACAAACTCCATG +
Preference number: 4 (lower is better)
Translates to: KNQCHTCRSQSGSPCAASWAKAV*FSTNSM
Trigger: CATGGAGTTTGTGCTGAAGCACACGGCCTTCGCCCA...GGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp TTATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTCAGCGCCAGGGACTCTaGCTCGTGGGGGTTCAGGGT +
Preference number: 4 (lower is better)
Translates to: LFPKNQCHTCRSQSGSPCQRQGL*LVGVQG
Trigger: ACCCTGAACCCCCACGAGGCAGAGTCCCTGGCGCTG...ACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp ATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCGTGCTGTTCTGCTCTTaGTGTAGCCACCGGCGCGAG +
Preference number: 4 (lower is better)
Translates to: ISKESVSHMQITKRVSLCVLFCS*CSHRRE
Trigger: CTCGCGCCGGTGGCTACAGCAAGAGCAGAACAGCAC...GCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp ATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTTTTCTAGTCTTCCCCGTGCTGTTCTaGTCTTGCTGTAGCCACCGG +
Preference number: 4 (lower is better)
Translates to: MQITKRVSLCCFLLCFLVFPVLF*SCCSHR
Trigger: CCGGTGGCTACAGCAAGAGCAGAACAGCACGGGGAA...GACTAGAAAACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR GCA 90 bp TATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGGCAGCCTCCAGCTCCTaGACGAGGGTGCTCCACTGT +
Preference number: 4 (lower is better)
Translates to: YFQRISVTHADHKAGLPVAASSS*TRVLHC
Trigger: ACAGTGGAGCACCCTCGTGCAGGAGCTGGAGGCTGC...CACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp TTCCAGGCTGGAAATCCCGAGAAGGTTCTCCACTTTCGCTTTAACATCTTCATCCGCTGCAGGCTGGGGTaGACGTTTTCCTCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: FQAGNPEKVLHFRFNIFIRCRLG*TFSSSH
Trigger: GTGGCTGGAGGAAAACGTGCACCCCAGCCTGCAGCG...GATGAAGATGTTAAAGCGAAAGTGGAGAACCTTCTCGGGATTTCCAGCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp ACATCTTCATCAAATCCTCCCATGAGGCCTGCAGGCACCAGCGTGGACGAATCTCATGGAAATGCTTGCTaGAAGAGGCTGACGGCCAGA +
Preference number: 4 (lower is better)
Translates to: TSSSNPPMRPAGTSVDESHGNAC*KRLTAR
Trigger: TCTGGCCGTCAGCCTCTTGCAGCAAGCATTTCCATG...AGATTCGTCCACGCTGGTGCCTGCAGGCCTCATGGGAGGATTTGATGAAGATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR CCA 90 bp AGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTCCTGTGAACTCCTATaGCGAAGTCTCCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: SVTHADHKAGLPVLLPSVSCELL*RSLLGD
Trigger: GTCCCCAAGGAGACTTCGCCATAGGAGTTCACAGGA...CACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CCA 90 bp TTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGTGTAGCTCCAGGACCTaGTCAATCATGGCGCCCACC +
Preference number: 4 (lower is better)
Translates to: FQRISVTHADHKAGLPVLCSSRT*SIMAPT
Trigger: GGTGGGCGCCATGATTGACCAGGTCCTGGAGCTACA...CAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR CCA 90 bp CTGGAAATCCCGAGAAGGTTCTCCACTTTCGCTTTAACATCTTCATCAAATCCTCCGGACGCTGCGAGCTaGTCCTCAGGCAGGTCTCGG +
Preference number: 4 (lower is better)
Translates to: LEIPRRFSTFALTSSSNPPDAAS*SSGRSR
Trigger: CCGAGACCTGCCTGAGGACCAGCTCGCAGCGTCCGG...AGGATTTGATGAAGATGTTAAAGCGAAAGTGGAGAACCTTCTCGGGATTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp AGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGACAGAGCTGCGCAGATaGAGGCTGACTTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: SVTHADHKAGLPVLLPSVTELRR*RLTCVT
Trigger: TGTCACACAAGTCAGCCTCCATCTGCGCAGCTCTGT...CACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CCA 90 bp TTCCAGGCTGGAAATCCCGAGAAGGTTCTCCACTTTCGCTTTAACATCTTCATCGCAGCCGCTGCAGGCTaGGGTGCACGTTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: FQAGNPEKVLHFRFNIFIAAAAG*GARFPP
Trigger: TGGAGGAAAACGTGCACCCCAGCCTGCAGCGGCTGC...GATGAAGATGTTAAAGCGAAAGTGGAGAACCTTCTCGGGATTTCCAGCCTGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp TTATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTCCAGCAGGAGCCCCCTaGCATGAGCTCTCCCCTCAG +
Preference number: 4 (lower is better)
Translates to: LFPKNQCHTCRSQSGSPCPAGAP*HELSPQ
Trigger: CTGAGGGGAGAGCTCATGCCAGGGGGCTCCTGCTGG...ACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR CCA 90 bp CTTGGTGTTCATGGAAATGCTTGCTGCAAGAGGCTGACGGCCAGAGGGCAGGAGCCGACTTGGTGTTCATaGAAATGCTTGCTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: LGVHGNACCKRLTARGQEPTWCS*KCLLQE
Trigger: CTCTTGCAGCAAGCATTTCCATGAACACCAAGTCGG...CTCCTGCCCTCTGGCCGTCAGCCTCTTGCAGCAAGCATTTCCATGAACACCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR CCA 90 bp CTCCACTTTCGCTTTAACATCTTCATCAAATCCTCCCATGAGGCCTGCAGGCACCTGCAGGCACCAGCGTaGACGAATCTCCGACTTGGT +
Preference number: 4 (lower is better)
Translates to: LHFRFNIFIKSSHEACRHLQAPA*TNLRLG
Trigger: ACCAAGTCGGAGATTCGTCCACGCTGGTGCCTGCAG...GTGCCTGCAGGCCTCATGGGAGGATTTGATGAAGATGTTAAAGCGAAAGTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR TCA 90 bp CATGAGGAGGACCTTGCCGTGCACATCCAGGTCGGCCGTGTAGTCCCAGAGCACAAATGGAGTGGAACCTaGCATTTCAATATTTCCTGT +
Preference number: 4 (lower is better)
Translates to: HEEDLAVHIQVGRVVPEHKWSGT*HFNISC
Trigger: ACAGGAAATATTGAAATGTCAGGTTCCACTCCATTT...GTGCTCTGGGACTACACGGCCGACCTGGATGTGCACGGCAAGGTCCTCCTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR TCA 90 bp TTCCAGGCTGGAAATCCCGAGAAGGTTCTCCACTTTCGCTTTAACATCTTCATCCATCAAATCCTCCCATaGGGCCTGCAGGCACCAGCG +
Preference number: 4 (lower is better)
Translates to: FQAGNPEKVLHFRFNIFIHQILP*GLQAPA
Trigger: CGCTGGTGCCTGCAGGCCTCATGGGAGGATTTGATG...GATGAAGATGTTAAAGCGAAAGTGGAGAACCTTCTCGGGATTTCCAGCCTGGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR GCA 90 bp TTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACTTGTGTGTTGAGTCCAGCCAGATaGAAGATCTCTTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: LPSSSASTELRRWRLTCVLSPAR*KISLIS
Trigger: TGAAATCAAAGAGATCTTGCATCTGGCTGGACTCAA...CACACAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS-3UTR GCA 90 bp AATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCGGCACAACTTCCCCGTaGTGTTCTGCTCTTGCTGTA +
Preference number: 4 (lower is better)
Translates to: NQCHTCRSQSGSPCAASFGTTSP*CSALAV
Trigger: TACAGCAAGAGCAGAACAGCACGGGGAAGTTGTGCC...GAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp TTATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTTGGTTCCTGAGGTGGTaGTCAACAGGGGGCACGGCC +
Preference number: 4 (lower is better)
Translates to: LFPKNQCHTCRSQSGSPCWFLRW*STGGTA
Trigger: GGCCGTGCCCCCTGTTGAGCACCACCTCAGGAACCA...ACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp TTATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTCAGGAGGCTGAGCGCTaGGGGCTGGATGTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LFPKNQCHTCRSQSGSPCQEAER*GLDVLN
Trigger: GTTCAGCACATCCAGCCCGCAGCGCTCAGCCTCCTG...ACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp CAGGCTGGAAATCCCGAGAAGGTTCTCCACTTTCGCTTTAACATCTTCATCAAACAGGAGGCTGAGCGCTaGGGGCTGGATGTGCTGAAC +
Preference number: 4 (lower is better)
Translates to: QAGNPEKVLHFRFNIFIKQEAER*GLDVLN
Trigger: GTTCAGCACATCCAGCCCGCAGCGCTCAGCCTCCTG...TTTGATGAAGATGTTAAAGCGAAAGTGGAGAACCTTCTCGGGATTTCCAGCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp AATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCACAGAGCTGCGCAGATaGAGGCTGACTTGTGTGACA +
Preference number: 4 (lower is better)
Translates to: NQCHTCRSQSGSPCAASFTELRR*RLTCVT
Trigger: TGTCACACAAGTCAGCCTCCATCTGCGCAGCTCTGT...GAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CCA 90 bp TTATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCAGCCGCTGCAGGCTaGGGTGCACGTTTTCCTCCA +
Preference number: 4 (lower is better)
Translates to: LFPKNQCHTCRSQSGSPCAAAAG*GARFPP
Trigger: TGGAGGAAAACGTGCACCCCAGCCTGCAGCGGCTGC...ACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAATAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR CCA 90 bp TCTCCGACTTGGTGTTCATGGAAATGCTTGCTGCAAGAGGCTGACGGCCAGAGGCCGACTTGGTGTTCATaGAAATGCTTGCTGCAAGAG +
Preference number: 4 (lower is better)
Translates to: SPTWCSWKCLLQEADGQRPTWCS*KCLLQE
Trigger: CTCTTGCAGCAAGCATTTCCATGAACACCAAGTCGG...CCTCTGGCCGTCAGCCTCTTGCAGCAAGCATTTCCATGAACACCAAGTCGGAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR TCA 90 bp GGAATCACCTCCAGCTCATTGAGTCCAGCCAGATGCAAGATCTCTTTGATTTCAGGCCGTTTGCACCTCTaGGAGGTACGAGACCTTTGG +
Preference number: 4 (lower is better)
Translates to: GITSSSLSPARCKISLISGRLHL*EVRDLW
Trigger: CCAAAGGTCTCGTACCTCTCAGAGGTGCAAACGGCC...TGAAATCAAAGAGATCTTGCATCTGGCTGGACTCAATGAGCTGGAGGTGATTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581482.5
CDS-3UTR GCA 90 bp TTATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTCACCGCCGGTACTTCTaGATGAGGAGGACCTTGCCG +
Preference number: 4 (lower is better)
Translates to: LFPKNQCHTCRSQSGSPCHRRYF*MRRTLP
Trigger: CGGCAAGGTCCTCCTCATGCAGAAGTACCGGCGGTG...ACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAATAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp GGAAATCCCGAGAAGGTTCTCCACTTTCGCTTTAACATCTTCATCAAATCCTCCAGAGCTTGCAGCCGCTaGAGGCTGGGGTGCACGTTT +
Preference number: 4 (lower is better)
Translates to: GNPEKVLHFRFNIFIKSSRACSR*RLGCTF
Trigger: AAACGTGCACCCCAGCCTGCAGCGGCTGCAAGCTCT...GGAGGATTTGATGAAGATGTTAAAGCGAAAGTGGAGAACCTTCTCGGGATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp CTGGAAATCCCGAGAAGGTTCTCCACTTTCGCTTTAACATCTTCATCAAATCCTACCTGGAAGTGTGAGTaGTGGGTCCAGGGTGCGGGG +
Preference number: 4 (lower is better)
Translates to: LEIPRRFSTFALTSSSNPTWKCE*WVQGAG
Trigger: CCCCGCACCCTGGACCCAGCACTCACACTTCCAGGT...AGGATTTGATGAAGATGTTAAAGCGAAAGTGGAGAACCTTCTCGGGATTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000583354.5
CDS-3UTR GCA 90 bp AGCGTGGACGAATCTCCGACTTGGTGTTCATGGAAATGCTTGCTGCAAGAGGCTGGCCATTTTTCTTTCTaGATCAGCACCACGCAGTCG +
Preference number: 4 (lower is better)
Translates to: SVDESPTWCSWKCLLQEAGHFSF*ISTTQS
Trigger: CGACTGCGTGGTGCTGATGCAGAAAGAAAAATGGCC...AGCCTCTTGCAGCAAGCATTTCCATGAACACCAAGTCGGAGATTCGTCCACGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000583354.5
CDS-3UTR CCA 90 bp TATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGATGGCGAAGTCTCCTTaGGGACTTCTTCCTGCGCCG +
Preference number: 4 (lower is better)
Translates to: YFQRISVTHADHKAGLPVMAKSP*GLLPAP
Trigger: CGGCGCAGGAAGAAGTCCCCAAGGAGACTTCGCCAT...CACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR CCA 90 bp ACCAAGGGAATCACCTCCAGCTCATTGAGTCCAGCCAGATGCAAGATCTCTTTGTCCTGTGAACTCCTATaGCGAAGTCTCCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: TKGITSSSLSPARCKISLSCELL*RSLLGD
Trigger: GTCCCCAAGGAGACTTCGCCATAGGAGTTCACAGGA...CAAAGAGATCTTGCATCTGGCTGGACTCAATGAGCTGGAGGTGATTCCCTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581482.5
ENST00000582315.5
CDS-3UTR CCA 90 bp AAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCGAGGTACGAGACCTTTaGTGGAGCTCCTTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: KNQCHTCRSQSGSPCAASEVRDL*WSSFKV
Trigger: GACCTTAAAGGAGCTCCACCAAAGGTCTCGTACCTC...GGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CCA 90 bp ATGTGTCCAAATGTCTGCACCAAGGGAATCACCTCCAGCTCATTGAGTCCAGCCGAGGTACGAGACCTTTaGTGGAGCTCCTTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: MCPNVCTKGITSSSLSPAEVRDL*WSSFKV
Trigger: GACCTTAAAGGAGCTCCACCAAAGGTCTCGTACCTC...GGCTGGACTCAATGAGCTGGAGGTGATTCCCTTGGTGCAGACATTTGGACACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581482.5
ENST00000582315.5
CDS-3UTR TCA 90 bp ATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTCAGAGGAAAAATCTCTaGGAGGTACGAGACCTTTGG +
Preference number: 4 (lower is better)
Translates to: ISVTHADHKAGLPVLLPSQRKNL*EVRDLW
Trigger: CCAAAGGTCTCGTACCTCTCAGAGATTTTTCCTCTG...AGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR TCA 90 bp TGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTTGATGCAAGATCTCTTTaGTTTCAGAGGGGCTGTAGG +
Preference number: 4 (lower is better)
Translates to: CHTCRSQSGSPCAASFCVDARSL*FQRGCR
Trigger: CCTACAGCCCCTCTGAAATCAAAGAGATCTTGCATC...AACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp TGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTTATGTGTCCAAATGTCTaGACCAAGGGAATCACCTCC +
Preference number: 4 (lower is better)
Translates to: CHTCRSQSGSPCAASFCVMCPNV*TKGITS
Trigger: GGAGGTGATTCCCTTGGTGCAGACATTTGGACACAT...AACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp CTGGAAATCCCGAGAAGGTTCTCCACTTTCGCTTTAACATCTTCATCAAATCCTCACGTGGGCCCGTATTaGCCAGGCCATTTGGCAGTG +
Preference number: 4 (lower is better)
Translates to: LEIPRRFSTFALTSSSNPHVGPY*PGHLAV
Trigger: CACTGCCAAATGGCCTGGGCAATACGGGCCCACGTG...AGGATTTGATGAAGATGTTAAAGCGAAAGTGGAGAACCTTCTCGGGATTTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR GCA 90 bp AAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCGGGTCTCCCTGTGCTaGTTCCTTCTGTGTTTTCTA +
Preference number: 4 (lower is better)
Translates to: KESVSHMQITKRVSLCCFRVSLC*FLLCFL
Trigger: TAGAAAACACAGAAGGAAGCAGCACAGGGAGACCCG...GAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp CAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTAATCAGTGTCACACATaGAGATCACAAAGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: QCHTCRSQSGSPCAASFCNQCHT*RSQSGS
Trigger: AGACCCGCTTTGTGATCTGCATGTGTGACACTGATT...ACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp TTTTTCCAGGCTGGAAATCCCGAGAAGGTTCTCCACTTTCGCTTTAACATCTTCTGGGCAGGACGTGTGTaGAGCAAAGGTGGAGCCGTT +
Preference number: 4 (lower is better)
Translates to: FFQAGNPEKVLHFRFNIFWAGRV*SKGGAV
Trigger: AACGGCTCCACCTTTGCTGCACACACGTCCTGCCCA...GAAGATGTTAAAGCGAAAGTGGAGAACCTTCTCGGGATTTCCAGCCTGGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000583354.5
CDS-3UTR CCA 90 bp TTATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTTGCAGCCACTGCACGTaGTTCCTGAGGTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: LFPKNQCHTCRSQSGSPCCSHCT*FLRWCS
Trigger: TGAGCACCACCTCAGGAACCACGTGCAGTGGCTGCA...ACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR CCA 90 bp GGAAATCCCGAGAAGGTTCTCCACTTTCGCTTTAACATCTTCATCAAATCCTCCTGCAGCCACTGCACGTaGTTCCTGAGGTGGTGCTCA +
Preference number: 4 (lower is better)
Translates to: GNPEKVLHFRFNIFIKSSCSHCT*FLRWCS
Trigger: TGAGCACCACCTCAGGAACCACGTGCAGTGGCTGCA...GGAGGATTTGATGAAGATGTTAAAGCGAAAGTGGAGAACCTTCTCGGGATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CCA 90 bp AACATCTTCATCAAATCCTCCCATGAGGCCTGCAGGCACCAGCGTGGACGAATCGACGAATCTCCGACTTaGTGTTCATGGAAATGCTTG +
Preference number: 4 (lower is better)
Translates to: NIFIKSSHEACRHQRGRIDESPT*CSWKCL
Trigger: CAAGCATTTCCATGAACACCAAGTCGGAGATTCGTC...GATTCGTCCACGCTGGTGCCTGCAGGCCTCATGGGAGGATTTGATGAAGATGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR TCA 90 bp TTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCAGAGGAAAAATCTCTaGGAGGTACGAGACCTTTGG +
Preference number: 4 (lower is better)
Translates to: FQRISVTHADHKAGLPVLQRKNL*EVRDLW
Trigger: CCAAAGGTCTCGTACCTCTCAGAGATTTTTCCTCTG...CAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp GAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTAATCAGTGTCACACATaGAGATCACAAAGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: ESVSHMQITKRVSLCCFLNQCHT*RSQSGS
Trigger: AGACCCGCTTTGTGATCTGCATGTGTGACACTGATT...AAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp TTCCAGGCTGGAAATCCCGAGAAGGTTCTCCACTTTCGCTTTAACATCTTCATCGTTCATGGAAATGCTTaGTGCAAGAGGCTGACGGCC +
Preference number: 4 (lower is better)
Translates to: FQAGNPEKVLHFRFNIFIVHGNA*CKRLTA
Trigger: GGCCGTCAGCCTCTTGCAGCAAGCATTTCCATGAAC...GATGAAGATGTTAAAGCGAAAGTGGAGAACCTTCTCGGGATTTCCAGCCTGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS-3UTR CCA 90 bp TTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGAGGTACGAGACCTTTaGTGGAGCTCCTTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: FPKNQCHTCRSQSGSPCAEVRDL*WSSFKV
Trigger: GACCTTAAAGGAGCTCCACCAAAGGTCTCGTACCTC...AGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR CCA 90 bp TCCAGCCAGATGCAAGATCTCTTTGATTTCAGAGGGGCTGTAATCCCAGCTACTGAGGTACGAGACCTTTaGTGGAGCTCCTTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: SSQMQDLFDFRGAVIPATEVRDL*WSSFKV
Trigger: GACCTTAAAGGAGCTCCACCAAAGGTCTCGTACCTC...AGTAGCTGGGATTACAGCCCCTCTGAAATCAAAGAGATCTTGCATCTGGCTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582315.5
CDS-3UTR CCA 90 bp TTATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTTCCTGTGAACTCCTATaGCGAAGTCTCCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LFPKNQCHTCRSQSGSPCSCELL*RSLLGD
Trigger: GTCCCCAAGGAGACTTCGCCATAGGAGTTCACAGGA...ACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR TCA 90 bp GAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTTTTCAATATTTCCTGTaGACTCCTATGGCGAAGTCT +
Preference number: 4 (lower is better)
Translates to: ESVSHMQITKRVSLCCFLFQYFL*TPMAKS
Trigger: AGACTTCGCCATAGGAGTTCACAGGAAATATTGAAA...AAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR GCA 90 bp CCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTTGAGTCCAGCCAGATaGAAGATCTCTTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: PKNQCHTCRSQSGSPCAALSPAR*KISLIS
Trigger: TGAAATCAAAGAGATCTTGCATCTGGCTGGACTCAA...AGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR GCA 90 bp AGCCAGATGCAAGATCTCTTTGATTTCAGAGGGGCTGTAGGCGTACTTGGCCCTTTGAGTCCAGCCAGATaGAAGATCTCTTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: SQMQDLFDFRGAVGVLGPLSPAR*KISLIS
Trigger: TGAAATCAAAGAGATCTTGCATCTGGCTGGACTCAA...AGGGCCAAGTACGCCTACAGCCCCTCTGAAATCAAAGAGATCTTGCATCTGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581482.5
3UTR CAA 72 bp CCAAATGTCTGCACCAAGGGAATCACCTCCAGCTCATaGAGTCCAGCCAGATGCAAGATCTCTTTGATTTCA +
Preference number: 4 (lower is better)
Translates to: PNVCTKGITSSS*SPARCKISLIS
Trigger: TGAAATCAAAGAGATCTTGCATCTGGCTGGACTCAATGAGCTGGAGGTGATTCCCTTGGTGCAGACATTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581482.5
ENST00000582315.5
CDS-3UTR TCA 90 bp ACCAAGGGAATCACCTCCAGCTCATTGAGTCCAGCCAGATGCAAGATCTCTTTGTTTCAATATTTCCTGTaGACTCCTATGGCGAAGTCT +
Preference number: 4 (lower is better)
Translates to: TKGITSSSLSPARCKISLFQYFL*TPMAKS
Trigger: AGACTTCGCCATAGGAGTTCACAGGAAATATTGAAA...CAAAGAGATCTTGCATCTGGCTGGACTCAATGAGCTGGAGGTGATTCCCTTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000581482.5
ENST00000582315.5
CDS-3UTR GCA 90 bp TATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGAATCAGTGTCACACATaGAGATCACAAAGCGGGTCT +
Preference number: 4 (lower is better)
Translates to: YFQRISVTHADHKAGLPVNQCHT*RSQSGS
Trigger: AGACCCGCTTTGTGATCTGCATGTGTGACACTGATT...CACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR TCA 90 bp CCGTGTGCTTCAGCACAAACTCCATGTGTCCAAATGTCTGCACCAAGGGAATCAAAATGGAGTGGAACCTaGCATTTCAATATTTCCTGT +
Preference number: 4 (lower is better)
Translates to: PCASAQTPCVQMSAPRESKWSGT*HFNISC
Trigger: ACAGGAAATATTGAAATGTCAGGTTCCACTCCATTT...TGATTCCCTTGGTGCAGACATTTGGACACATGGAGTTTGTGCTGAAGCACACGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581482.5
ENST00000582315.5
CDS-3UTR TCA 90 bp TTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTAAATGGAGTGGAACCTaGCATTTCAATATTTCCTGT +
Preference number: 4 (lower is better)
Translates to: FPKNQCHTCRSQSGSPCAKWSGT*HFNISC
Trigger: ACAGGAAATATTGAAATGTCAGGTTCCACTCCATTT...AGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS CCA 90 bp GCCTGGCGCCCGCGTCCGGCCCGGCTCCGCGGCGGCCTGGTCCGATaGCTCCTCAGCGGAGGGCCGCAACCAAGGCGCCCGAGGGCAACG +
Preference number: 5 (lower is better)
Translates to: AWRPRPARLRGGLVR*LLSGGPQPRRPRAT
Trigger: CGTTGCCCTCGGGCGCCTTGGTTGCGGCCCTCCGCTGAGGAGCCATCGGACCAGGCCGCCGCGGAGCCGGGCCGGACGCGGGCGCCAGGC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000337014.10
CDS CCA 90 bp CTCGGCCGCCGATTGCTCGGGCCTGGCCGCCAGCCCAGGGGCCGATaGCCGAGCGCGTCGCACTCGCGTCCCTGCGCCGTGCCTGCCTCG +
Preference number: 5 (lower is better)
Translates to: LGRRLLGPGRQPRGR*PSASHSRPCAVPAS
Trigger: CGAGGCAGGCACGGCGCAGGGACGCGAGTGCGACGCGCTCGGCCATCGGCCCCTGGGCTGGCGGCCAGGCCCGAGCAATCGGCGGCCGAG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000337014.10
CDS GCA 90 bp GGGCCGATGGCCGAGCGCGTCGCACTCGCGTCCCTGCGCCGTGCCTaGCTCGCGCTCCCTGTTACGGCGTTCGTCCCCGGGCCTGGCGCC +
Preference number: 5 (lower is better)
Translates to: GPMAERVALASLRRA*LALPVTAFVPGPGA
Trigger: GGCGCCAGGCCCGGGGACGAACGCCGTAACAGGGAGCGCGAGGCAGGCACGGCGCAGGGACGCGAGTGCGACGCGCTCGGCCATCGGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000337014.10
CDS GCA 90 bp CGCCAGCCCAGGGGCCGATGGCCGAGCGCGTCGCACTCGCGTCCCTaGGCCGTGCCTGCCTCGCGCTCCCTGTTACGGCGTTCGTCCCCG +
Preference number: 5 (lower is better)
Translates to: RQPRGRWPSASHSRP*AVPASRSLLRRSSP
Trigger: CGGGGACGAACGCCGTAACAGGGAGCGCGAGGCAGGCACGGCGCAGGGACGCGAGTGCGACGCGCTCGGCCATCGGCCCCTGGGCTGGCG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000337014.10
CDS-3UTR CAA 90 bp CATCAAATCCTCCGGCCGCGTCCCCGTCCCTGGGCCGCCGCGCCTGCGGGTCCCGTCCTGCAGCAGAGCTaGCAGCCGCTGCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: HQILRPRPRPWAAAPAGPVLQQS*QPLQAG
Trigger: CCCAGCCTGCAGCGGCTGCAAGCTCTGCTGCAGGAC...GGGACCCGCAGGCGCGGCGGCCCAGGGACGGGGACGCGGCCGGAGGATTTGATG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CAA 90 bp CACCAGGGGTGTCACGCTGGGGCGCCGGGCCTTCACGCCGCTGGCCACCGCCCGTGCATGAGGAGGACCTaGCCGTGCACATCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: HQGCHAGAPGLHAAGHRPCMRRT*PCTSRS
Trigger: CGACCTGGATGTGCACGGCAAGGTCCTCCTCATGCA...CGGGCGGTGGCCAGCGGCGTGAAGGCCCGGCGCCCCAGCGTGACACCCCTGGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR CAA 90 bp ACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCAGGCCCCGTGGCACCCTaGAAGGCACTGGCTGCCCAC +
Preference number: 5 (lower is better)
Translates to: TLLGQRARRPRGPVLPRPGPVAP*KALAAH
Trigger: GTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGCC...TGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CAA 90 bp GTTCAGGGTGCAGGGGAAGGAGCCCACCTCCCGCAGGTGGGCGAAGGCCGTGTGGGCCCCGTGGCACCCTaGAAGGCACTGGCTGCCCAC +
Preference number: 5 (lower is better)
Translates to: VQGAGEGAHLPQVGEGRVGPVAP*KALAAH
Trigger: GTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGCC...CACACGGCCTTCGCCCACCTGCGGGAGGTGGGCTCCTTCCCCTGCACCCTGAAC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS CCA 90 bp ACGGCCAGAGGGCAGGAGGGAAGTGCCCCAGTCACGGGTGGCGGATaGGGCCGTGGGCAAGGGACACGCGTAGAAGCAACTGCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: TARGQEGSAPVTGGG*GRGQGTRVEATAGR
Trigger: CCTGCCTGCAGTTGCTTCTACGCGTGTCCCTTGCCCACGGCCCCATCCGCCACCCGTGACTGGGGCACTTCCCTCCTGCCCTCTGGCCGT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578616.5
CDS CCA 90 bp GAGGCTGACGGCCAGAGGGCAGGAGGGAAGTGCCCCAGTCACGGGTaGCGGATGGGGCCGTGGGCAAGGGACACGCGTAGAAGCAACTGC +
Preference number: 5 (lower is better)
Translates to: EADGQRAGGKCPSHG*RMGPWARDTRRSNC
Trigger: GCAGTTGCTTCTACGCGTGTCCCTTGCCCACGGCCCCATCCGCCACCCGTGACTGGGGCACTTCCCTCCTGCCCTCTGGCCGTCAGCCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578616.5
CDS-3UTR CAA 90 bp GCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGGTCCTGCAGCAGAGCTaGCAGCCGCTGCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: ARGHDAHVGPYCPGHLAVVLQQS*QPLQAG
Trigger: CCCAGCCTGCAGCGGCTGCAAGCTCTGCTGCAGGAC...CACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS GCA 90 bp TGGCTGGGCCCCGTGGCACCCTTGAAGGCACTGGCTGCCCACAGCTaGGGAAAGCCGCACCGCCGGTACTTCTGCATGAGGAGGACTGGG +
Preference number: 5 (lower is better)
Translates to: WLGPVAPLKALAAHS*GKPHRRYFCMRRTG
Trigger: CCCAGTCCTCCTCATGCAGAAGTACCGGCGGTGCGGCTTTCCGCAGCTGTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGCCCAGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000585077.1
ENST00000644886.1
CDS GCA 90 bp ACTGTGAGGACCACCACAGTCCAGCAGGGTGGTTGGAGCACTGGGTaGTTGGCCTCCTGCCCTCCGGGTCTTTCGGGGAGGGGCCGGTGG +
Preference number: 5 (lower is better)
Translates to: TVRTTTVQQGGWSTG*LASCPPGLSGRGRW
Trigger: CCACCGGCCCCTCCCCGAAAGACCCGGAGGGCAGGAGGCCAAGCACCCAGTGCTCCAACCACCCTGCTGGACTGTGGTGGTCCTCACAGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000585077.1
CDS GCA 90 bp GCGCCTGAGCCCCACACCTGCTCGGCCAGGTGGGCAGGACGTGTGTaGAGCAAAGGTGGAGCCGTTCCCCACCTCCGACCTGCGTGCATT +
Preference number: 5 (lower is better)
Translates to: APEPHTCSARWAGRV*SKGGAVPHLRPACI
Trigger: AATGCACGCAGGTCGGAGGTGGGGAACGGCTCCACCTTTGCTGCACACACGTCCTGCCCACCTGGCCGAGCAGGTGTGGGGCTCAGGCGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000585077.1
CDS CCA 90 bp TCCGACTGTGAGGACCACCACAGTCCAGCAGGGTGGTTGGAGCACTaGGTGCTTGGCCTCCTGCCCTCCGGGTCTTTCGGGGAGGGGCCG +
Preference number: 5 (lower is better)
Translates to: SDCEDHHSPAGWLEH*VLGLLPSGSFGEGP
Trigger: CGGCCCCTCCCCGAAAGACCCGGAGGGCAGGAGGCCAAGCACCCAGTGCTCCAACCACCCTGCTGGACTGTGGTGGTCCTCACAGTCGGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000585077.1
CDS CCA 90 bp AAGCAAACAGGTGAGTGGCTCCAGGGGAGGCGGCCAACACGGCCCTaGACACGCCTCCCGGGGCTGTACCCAGAGCCAACATGGGAGCCG +
Preference number: 5 (lower is better)
Translates to: KQTGEWLQGRRPTRP*TRLPGLYPEPTWEP
Trigger: CGGCTCCCATGTTGGCTCTGGGTACAGCCCCGGGAGGCGTGTCCAGGGCCGTGTTGGCCGCCTCCCCTGGAGCCACTCACCTGTTTGCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644886.1
CDS-3UTR CAA 90 bp CAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGCCCCGTGGCACCCTaGAAGGCACTGGCTGCCCAC +
Preference number: 5 (lower is better)
Translates to: QELSVGKTLLGQRARRPRGPVAP*KALAAH
Trigger: GTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGCC...ACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CAA 90 bp GGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCGTCCTGCAGCAGAGCTaGCAGCCGCTGCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: GPQELSVGKTLLGQRARRVLQQS*QPLQAG
Trigger: CCCAGCCTGCAGCGGCTGCAAGCTCTGCTGCAGGAC...GCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CAA 90 bp GAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTCCACGTGGGCCCGTATaGCCCAGGCCATTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: ECGQDTAGPEGTTPTWARPRGPV*PRPFGS
Trigger: ACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGG...ACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CAA 90 bp ACCGGCGCGAGGCCTCCCCCTCTCCGAGGTAATAGACCTCATCACACCCGATGTGGCCCCGTGGCACCCTaGAAGGCACTGGCTGCCCAC +
Preference number: 5 (lower is better)
Translates to: TGARPPPLRGNRPHHTRCGPVAP*KALAAH
Trigger: GTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGCC...ACATCGGGTGTGATGAGGTCTATTACCTCGGAGAGGGGGAGGCCTCGCGCCGGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR CAA 90 bp GCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCCAGTGACATACCTGTaGCCCTCCAGCAGCGCATCC +
Preference number: 5 (lower is better)
Translates to: AGPEGTTPTWARIAQAIWPVTYL*PSSSAS
Trigger: GGATGCGCTGCTGGAGGGCAACAGGTATGTCACTGG...CCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CAA 90 bp ACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTGCAGAGCCCCCCCACGTGGGCCCGTATaGCCCAGGCCATTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: TTPTWARIAQAIWQCRAPPRGPV*PRPFGS
Trigger: ACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGG...GGGGGCTCTGCACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGT
67% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 4 transcripts:
ENST00000327949.15
ENST00000578130.5
ENST00000578775.2
ENST00000582429.5
CDS GCA 90 bp GAGACAGCCAGGCCCGGGTCTCAGTGTAGGAGACTCCAGAGTGTATaGGGCCGGCCCGGGTCCCAGTCGGGGAGACTCCAGAGTGTACGT +
Preference number: 5 (lower is better)
Translates to: ETARPGSQCRRLQSV*GRPGSQSGRLQSVR
Trigger: ACGTACACTCTGGAGTCTCCCCGACTGGGACCCGGGCCGGCCGCATACACTCTGGAGTCTCCTACACTGAGACCCGGGCCTGGCTGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644886.1
CDS CCA 90 bp GAGGCTGACGGCCAGAGGGCAGGAGGGAAGTGCCCCAGTCACGGGTaGCGGATGGGGCCGTGGGCAAGGGACACTGCAAATACCGTCAAT +
Preference number: 5 (lower is better)
Translates to: EADGQRAGGKCPSHG*RMGPWARDTANTVN
Trigger: ATTGACGGTATTTGCAGTGTCCCTTGCCCACGGCCCCATCCGCCACCCGTGACTGGGGCACTTCCCTCCTGCCCTCTGGCCGTCAGCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582131.1
CDS-3UTR CAA 90 bp AACCAGCCAGTGACATACCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCGGCCCCGTGGCACCCTaGAAGGCACTGGCTGCCCAC +
Preference number: 5 (lower is better)
Translates to: NQPVTYLLPSSSASTELRGPVAP*KALAAH
Trigger: GTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGCC...GCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGGTATGTCACTGGCTGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CAA 90 bp GGCCAGAGGGCACGACGCCCACGTGGGCCCGTATTGCCCAGGCCATTTGGCAGTACAAGGGCAAGGATGTaGCTGCCAGGGAAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: GQRARRPRGPVLPRPFGSTRARM*LPGKEP
Trigger: CGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGT...ACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGGGCGTCGTGCCCTCTGGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CAA 90 bp CTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTGTTGCCCTCCAGCAGGTCCTGCAGCAGAGCTaGCAGCCGCTGCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: LAVVGAEPASDIPVALQQVLQQS*QPLQAG
Trigger: CCCAGCCTGCAGCGGCTGCAAGCTCTGCTGCAGGAC...CTGCTGGAGGGCAACAGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CAA 90 bp CACCCGATGTGCAGCCGCTGGGCGCCTGGGTGTAGCTCCAGGACCTGGTCAATCCCACGTGGGCCCGTATaGCCCAGGCCATTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: HPMCSRWAPGCSSRTWSIPRGPV*PRPFGS
Trigger: ACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGG...GATTGACCAGGTCCTGGAGCTACACCCAGGCGCCCAGCGGCTGCACATCGGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS CCA 90 bp CCACACCTGCTCGGCCAGGTGGGCAGGACGTGTGTGCAGCAAAGGTaGAGCCGTTCCCCACCTCCGACCTGCGTGCATTTCTGCGGATTC +
Preference number: 5 (lower is better)
Translates to: PHLLGQVGRTCVQQR*SRSPPPTCVHFCGF
Trigger: GAATCCGCAGAAATGCACGCAGGTCGGAGGTGGGGAACGGCTCCACCTTTGCTGCACACACGTCCTGCCCACCTGGCCGAGCAGGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000585077.1
CDS-3UTR CAA 90 bp CGCCGCTGGCCACCGCCCGCATGTGTGACAGGCACAACTTCCCCGTGCTGTTCTTGCATGAGGAGGACCTaGCCGTGCACATCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: RRWPPPACVTGTTSPCCSCMRRT*PCTSRS
Trigger: CGACCTGGATGTGCACGGCAAGGTCCTCCTCATGCA...AGAACAGCACGGGGAAGTTGTGCCTGTCACACATGCGGGCGGTGGCCAGCGGCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578775.2
ENST00000582315.5
CDS-3UTR CAA 90 bp GCTGCAGGCTGGGGTGCACGTTTTCCTCCAGCCACTCCTCCACGGCATCCGGGTACAAGGGCAAGGATGTaGCTGCCAGGGAAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: AAGWGARFPPATPPRHPGTRARM*LPGKEP
Trigger: CGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGT...ACCCGGATGCCGTGGAGGAGTGGCTGGAGGAAAACGTGCACCCCAGCCTGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS GCA 90 bp CGTGTGTGCAGCAAAGGTGGAGCCGTTCCCCACCTCCGACCTGCGTaGATTTCTGCGGATTCACTGTGTCTGAGGGGTGCCTCCCGCGTC +
Preference number: 5 (lower is better)
Translates to: RVCSKGGAVPHLRPA*ISADSLCLRGASRV
Trigger: GACGCGGGAGGCACCCCTCAGACACAGTGAATCCGCAGAAATGCACGCAGGTCGGAGGTGGGGAACGGCTCCACCTTTGCTGCACACACG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000585077.1
CDS GCA 90 bp CGCCTGCGGGTCCCGCTCTCCGCGCGTCTCGGCCATTTTTCTTTCTaGATCAGCACCACGCAGTCGCTAATTTCCCGTGTGGCCTGCGAG +
Preference number: 5 (lower is better)
Translates to: RLRVPLSARLGHFSF*ISTTQSLISRVACE
Trigger: CTCGCAGGCCACACGGGAAATTAGCGACTGCGTGGTGCTGATGCAGAAAGAAAAATGGCCGAGACGCGCGGAGAGCGGGACCCGCAGGCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000582131.1
ENST00000582429.5
ENST00000583354.5
ENST00000585077.1
CDS-3UTR CAA 90 bp TCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGCATGAGGAGGACCTaGCCGTGCACATCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: SGTECGQDTAGPEGTTPTCMRRT*PCTSRS
Trigger: CGACCTGGATGTGCACGGCAAGGTCCTCCTCATGCA...CGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CAA 90 bp CAGGGCCCTCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGATGCATGAGGAGGACCTaGCCGTGCACATCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: QGPQELSVGKTLLGQRARCMRRT*PCTSRS
Trigger: CGACCTGGATGTGCACGGCAAGGTCCTCCTCATGCA...TCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGAGGGCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578775.2
ENST00000582429.5
CDS-3UTR CAA 90 bp GGCCGCCGCGCCTGCGGGTCCCGCTCTCCGCGCGTCTCGGCCATTTTTCTTTCTCAGATGGAGGCTGACTaGTGTGACAAGGGCAAGGAT +
Preference number: 5 (lower is better)
Translates to: GRRACGSRSPRVSAIFLSQMEAD*CDKGKD
Trigger: ATCCTTGCCCTTGTCACACAAGTCAGCCTCCATCTG...AGAAAGAAAAATGGCCGAGACGCGCGGAGAGCGGGACCCGCAGGCGCGGCGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000583354.5
CDS-3UTR CAA 90 bp CGGGTGGATGAGCTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATAAGTCCAGCAGGGTGGTaGGAGCACTGGGTGCTTGGC +
Preference number: 5 (lower is better)
Translates to: RVDELPLAVVGAEPASDISPAGW*EHWVLG
Trigger: GCCAAGCACCCAGTGCTCCAACCACCCTGCTGGACT...TATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAGCTCATCCACCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582429.5
CDS GCA 90 bp CCTCCGACCTGCGTGCATTTCTGCGGATTCACTGTGTCTGAGGGGTaGCTCCCGCGTCACTCTCCAGCCTGCTTTGGGCTTAGGCCTGGA +
Preference number: 5 (lower is better)
Translates to: PPTCVHFCGFTVSEG*LPRHSPACFGLRPG
Trigger: TCCAGGCCTAAGCCCAAAGCAGGCTGGAGAGTGACGCGGGAGGCACCCCTCAGACACAGTGAATCCGCAGAAATGCACGCAGGTCGGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000585077.1
CDS GCA 90 bp AGGACGTGTGTGCAGCAAAGGTGGAGCCGTTCCCCACCTCCGACCTaGGTGCATTTCTGCGGATTCACTGTGTCTGAGGGGTGCCTCCCG +
Preference number: 5 (lower is better)
Translates to: RTCVQQRWSRSPPPT*VHFCGFTVSEGCLP
Trigger: CGGGAGGCACCCCTCAGACACAGTGAATCCGCAGAAATGCACGCAGGTCGGAGGTGGGGAACGGCTCCACCTTTGCTGCACACACGTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000585077.1
CDS-3UTR CAA 90 bp TCAGGAACTGAGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTATGGCGAAGTCTCCTaGGGGACTTCTTCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: SGTECGQDTAGPEGTTPTYGEVS*GTSSCA
Trigger: GGCGCAGGAAGAAGTCCCCAAGGAGACTTCGCCATA...CGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACTCAGTTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000578775.2
CDS-3UTR CAA 90 bp AGTGTGGGCAAGACACTGCTGGGCCAGAGGGCACGACGCCCACGTGGGCCCGTACAGATGGAGGCTGACTaGTGTGACAAGGGCAAGGAT +
Preference number: 5 (lower is better)
Translates to: SVGKTLLGQRARRPRGPVQMEAD*CDKGKD
Trigger: ATCCTTGCCCTTGTCACACAAGTCAGCCTCCATCTG...TACGGGCCCACGTGGGCGTCGTGCCCTCTGGCCCAGCAGTGTCTTGCCCACACT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000578775.2
ENST00000582429.5
CDS CCA 90 bp ACGGCCAGAGGGCAGGAGGGAAGTGCCCCAGTCACGGGTGGCGGATaGGGCCGTGGGCAAGGGACACTGCAAATACCGTCAATATTAACA +
Preference number: 5 (lower is better)
Translates to: TARGQEGSAPVTGGG*GRGQGTLQIPSILT
Trigger: TGTTAATATTGACGGTATTTGCAGTGTCCCTTGCCCACGGCCCCATCCGCCACCCGTGACTGGGGCACTTCCCTCCTGCCCTCTGGCCGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582131.1
CDS-3UTR CAA 90 bp CCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACTTGTATGGCGAAGTCTCCTaGGGGACTTCTTCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: PVALQQRIHRAAQMEADLYGEVS*GTSSCA
Trigger: GGCGCAGGAAGAAGTCCCCAAGGAGACTTCGCCATA...CAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS-3UTR CAA 90 bp TCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGGGCCCCGTGGCACCCTaGAAGGCACTGGCTGCCCAC +
Preference number: 5 (lower is better)
Translates to: SVSHMQITKRVSLCCFLLGPVAP*KALAAH
Trigger: GTGGGCAGCCAGTGCCTTCAAGGGTGCCACGGGGCC...CAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CAA 90 bp CTTGCCGTGCACATCCAGGTCGGCCGTGTAGTCCCAGAGCACCGGCTCCACCAGCAGATGGAGGCTGACTaGTGTGACAAGGGCAAGGAT +
Preference number: 5 (lower is better)
Translates to: LAVHIQVGRVVPEHRLHQQMEAD*CDKGKD
Trigger: ATCCTTGCCCTTGTCACACAAGTCAGCCTCCATCTG...CTGGTGGAGCCGGTGCTCTGGGACTACACGGCCGACCTGGATGTGCACGGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578775.2
CDS-3UTR CAA 90 bp TTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACTTGTGTGCCAGTGACATACCTGTaGCCCTCCAGCAGCGCATCC +
Preference number: 5 (lower is better)
Translates to: LPSSSASTELRRWRLTCVPVTYL*PSSSAS
Trigger: GGATGCGCTGCTGGAGGGCAACAGGTATGTCACTGG...CACACAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
ENST00000583354.5
CDS-3UTR CAA 90 bp GTGGATGAGCTTCCGCTGGCGGTGGTAGGGGCTGAACCAGCCAGTGACATACCTCCAGTGACATACCTGTaGCCCTCCAGCAGCGCATCC +
Preference number: 5 (lower is better)
Translates to: VDELPLAVVGAEPASDIPPVTYL*PSSSAS
Trigger: GGATGCGCTGCTGGAGGGCAACAGGTATGTCACTGG...AGGTATGTCACTGGCTGGTTCAGCCCCTACCACCGCCAGCGGAAGCTCATCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS GCA 90 bp TCTTTCTGCATCAGCACCACGCAGTCGCTAATTTCCCGTGTGGCCTaGGAGTTTCCACACACACAGCTCCTCTGGCCAAGCCCCCTGCCG +
Preference number: 5 (lower is better)
Translates to: SFCISTTQSLISRVA*EFPHTQLLWPSPLP
Trigger: CGGCAGGGGGCTTGGCCAGAGGAGCTGTGTGTGTGGAAACTCGCAGGCCACACGGGAAATTAGCGACTGCGTGGTGCTGATGCAGAAAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000582131.1
ENST00000582429.5
ENST00000583354.5
ENST00000585077.1
CDS CCA 90 bp GCACGTCATGACCATCTTGGCTGCTGGCACCGCGGGGCATCCTCCTaGGTCTTCACACTGCCTTCCCTCCGTGTGTCTCAGGCTCTAAAT +
Preference number: 5 (lower is better)
Translates to: ARHDHLGCWHRGASS*VFTLPSLRVSQALN
Trigger: ATTTAGAGCCTGAGACACACGGAGGGAAGGCAGTGTGAAGACCCAGGAGGATGCCCCGCGGTGCCAGCAGCCAAGATGGTCATGACGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583978.5
CDS-3UTR CAA 90 bp GCTCCACTGTGCCAGGAGGCTGAGCGCTGCGGGCTGGATGTGCTGAACCATGACCAGATGGAGGCTGACTaGTGTGACAAGGGCAAGGAT +
Preference number: 5 (lower is better)
Translates to: APLCQEAERCGLDVLNHDQMEAD*CDKGKD
Trigger: ATCCTTGCCCTTGTCACACAAGTCAGCCTCCATCTG...GTCATGGTTCAGCACATCCAGCCCGCAGCGCTCAGCCTCCTGGCACAGTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
CDS CCA 90 bp AGGGCAGGAGGGAAGTGCCCCAGTCACGGGTGGCGGATGGGGCCGTaGGCAAGGGACACTGCAAATACCGTCAATATTAACACAGCTCTT +
Preference number: 5 (lower is better)
Translates to: RAGGKCPSHGWRMGP*ARDTANTVNINTAL
Trigger: AAGAGCTGTGTTAATATTGACGGTATTTGCAGTGTCCCTTGCCCACGGCCCCATCCGCCACCCGTGACTGGGGCACTTCCCTCCTGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582131.1
ENST00000585077.1
CDS-3UTR CAA 90 bp CCTGTTGCCCTCCAGCAGCGCATCCACAGAGCTGCGCAGATGGAGGCTGACTTGCAGATGGAGGCTGACTaGTGTGACAAGGGCAAGGAT +
Preference number: 5 (lower is better)
Translates to: PVALQQRIHRAAQMEADLQMEAD*CDKGKD
Trigger: ATCCTTGCCCTTGTCACACAAGTCAGCCTCCATCTG...CAAGTCAGCCTCCATCTGCGCAGCTCTGTGGATGCGCTGCTGGAGGGCAACAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
ENST00000583354.5
CDS-3UTR CAA 90 bp CAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTCCACGTGGGCCCGTATaGCCCAGGCCATTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: QCHTCRSQSGSPCAASFCPRGPV*PRPFGS
Trigger: ACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGG...ACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CAA 90 bp TCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGACAAGGGCAAGGATGTaGCTGCCAGGGAAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: SVSHMQITKRVSLCCFLLTRARM*LPGKEP
Trigger: CGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGT...CAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CAA 90 bp ATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCGTCCTGCAGCAGAGCTaGCAGCCGCTGCAGGCTGGG +
Preference number: 5 (lower is better)
Translates to: ISKESVSHMQITKRVSLCVLQQS*QPLQAG
Trigger: CCCAGCCTGCAGCGGCTGCAAGCTCTGCTGCAGGAC...GCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR CAA 90 bp AAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCCCACGTGGGCCCGTATaGCCCAGGCCATTTGGCAGT +
Preference number: 5 (lower is better)
Translates to: KNQCHTCRSQSGSPCAASPRGPV*PRPFGS
Trigger: ACTGCCAAATGGCCTGGGCAATACGGGCCCACGTGG...GGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CAA 90 bp GCTGGGGTGCACGTTTTCCTCCAGCCACTCCTCCACGGCATCCGGGTAGAAAGCGGACGAATCTCCGACTaGGTGTTCATGGAAATGCTT +
Preference number: 5 (lower is better)
Translates to: AGVHVFLQPLLHGIRVESGRISD*VFMEML
Trigger: AAGCATTTCCATGAACACCAAGTCGGAGATTCGTCC...GCTTTCTACCCGGATGCCGTGGAGGAGTGGCTGGAGGAAAACGTGCACCCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578616.5
CDS-3UTR CAA 90 bp ATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTACAAGGGCAAGGATGTaGCTGCCAGGGAAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: ISVTHADHKAGLPVLLPSTRARM*LPGKEP
Trigger: CGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGT...AGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CAA 90 bp GTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCTTCTGTGTTTACAAGGGCAAGGATGTaGCTGCCAGGGAAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: VTHADHKAGLPVLLPSVFTRARM*LPGKEP
Trigger: CGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGT...AAACACAGAAGGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CAA 90 bp TCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCCCAGTGACATACCTGTaGCCCTCCAGCAGCGCATCC +
Preference number: 5 (lower is better)
Translates to: SKESVSHMQITKRVSLCCPVTYL*PSSSAS
Trigger: GGATGCGCTGCTGGAGGGCAACAGGTATGTCACTGG...GCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR CAA 90 bp AAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCTTCCCCAGTGACATACCTGTaGCCCTCCAGCAGCGCATCC +
Preference number: 5 (lower is better)
Translates to: KNQCHTCRSQSGSPCAASPVTYL*PSSSAS
Trigger: GGATGCGCTGCTGGAGGGCAACAGGTATGTCACTGG...GGAAGCAGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000327949.15
ENST00000577944.5
ENST00000578775.2
CDS-3UTR CAA 90 bp TGCACCAAGGGAATCACCTCCAGCTCATTGAGTCCAGCCAGATGCAAGATCTCTTATGGCGAAGTCTCCTaGGGGACTTCTTCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: CTKGITSSSLSPARCKISYGEVS*GTSSCA
Trigger: GGCGCAGGAAGAAGTCCCCAAGGAGACTTCGCCATA...AGAGATCTTGCATCTGGCTGGACTCAATGAGCTGGAGGTGATTCCCTTGGTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581482.5
ENST00000582315.5
CDS TCA 90 bp GCAGCCTCAGAGGGCCCTCGTAGGGAAACATGTCTTCATACTCAATaGGGAGGCCGTTTGCACCTAGCGCACGGAACAGAGGAAAAATCT +
Preference number: 5 (lower is better)
Translates to: AASEGPRRETCLHTQ*GGRLHLAHGTEEKS
Trigger: AGATTTTTCCTCTGTTCCGTGCGCTAGGTGCAAACGGCCTCCTCATTGAGTATGAAGACATGTTTCCCTACGAGGGCCCTCTGAGGCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000327949.15
ENST00000337014.10
ENST00000577944.5
ENST00000578632.1
ENST00000578775.2
ENST00000644009.1
ENST00000644886.1
CDS-3UTR CAA 90 bp ATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTGCATGAGGAGGACCTaGCCGTGCACATCCAGGTCG +
Preference number: 5 (lower is better)
Translates to: ISKESVSHMQITKRVSLCCMRRT*PCTSRS
Trigger: CGACCTGGATGTGCACGGCAAGGTCCTCCTCATGCA...GCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR CAA 90 bp TTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCTTATGGCGAAGTCTCCTaGGGGACTTCTTCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: FPKNQCHTCRSQSGSPCAYGEVS*GTSSCA
Trigger: GGCGCAGGAAGAAGTCCCCAAGGAGACTTCGCCATA...AGCACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR CAA 90 bp GGAATCACCTCCAGCTCATTGAGTCCAGCCAGATGCAAGATCTCTTTGATTTCATATGGCGAAGTCTCCTaGGGGACTTCTTCCTGCGCC +
Preference number: 5 (lower is better)
Translates to: GITSSSLSPARCKISLISYGEVS*GTSSCA
Trigger: GGCGCAGGAAGAAGTCCCCAAGGAGACTTCGCCATA...TGAAATCAAAGAGATCTTGCATCTGGCTGGACTCAATGAGCTGGAGGTGATTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581482.5
ENST00000582315.5
CDS-3UTR CAA 90 bp CAGGCTGGAAATCCCGAGAAGGTTCTCCACTTTCGCTTTAACATCTTCATCAAAACAAGGGCAAGGATGTaGCTGCCAGGGAAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: QAGNPEKVLHFRFNIFIKTRARM*LPGKEP
Trigger: CGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGT...TTTGATGAAGATGTTAAAGCGAAAGTGGAGAACCTTCTCGGGATTTCCAGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000578616.5
ENST00000578775.2
ENST00000582429.5
ENST00000583354.5
CDS-3UTR CAA 90 bp TATTTCCAAAGAATCAGTGTCACACATGCAGATCACAAAGCGGGTCTCCCTGTGCAGATGGAGGCTGACTaGTGTGACAAGGGCAAGGAT +
Preference number: 5 (lower is better)
Translates to: YFQRISVTHADHKAGLPVQMEAD*CDKGKD
Trigger: ATCCTTGCCCTTGTCACACAAGTCAGCCTCCATCTG...CACAGGGAGACCCGCTTTGTGATCTGCATGTGTGACACTGATTCTTTGGAAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000577944.5
CDS-3UTR CAA 90 bp ACTTTCGCTTTAACATCTTCATCAAATCCTCCCATGAGGCCTGCAGGCACCAGCGGACGAATCTCCGACTaGGTGTTCATGGAAATGCTT +
Preference number: 5 (lower is better)
Translates to: TFALTSSSNPPMRPAGTSGRISD*VFMEML
Trigger: AAGCATTTCCATGAACACCAAGTCGGAGATTCGTCC...GCTGGTGCCTGCAGGCCTCATGGGAGGATTTGATGAAGATGTTAAAGCGAAAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578616.5
ENST00000583354.5
CDS TCA 90 bp ATCTCATCTGAAATGGAGTGGAACCTGACATTTCAATATTTCCTGTaGACTCCTATGGCGAAGTCTCCTTGGGGACTTCTTCCTGCGCCG +
Preference number: 5 (lower is better)
Translates to: ISSEMEWNLTFQYFL*TPMAKSPWGLLPAP
Trigger: CGGCGCAGGAAGAAGTCCCCAAGGAGACTTCGCCATAGGAGTTCACAGGAAATATTGAAATGTCAGGTTCCACTCCATTTCAGATGAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000327949.15
ENST00000337014.10
ENST00000577944.5
ENST00000578775.2
ENST00000580235.5
ENST00000581482.5
ENST00000582315.5
ENST00000583978.5
ENST00000644886.1
CDS CCA 72 bp CATTCTGCGTCCTCTCACCGGCCGCGTCCCCGTCCCTaGGCCGCCGCGCCTGCGGGTCCCGCTCTCCGCGCG +
Preference number: 6 (lower is better)
Translates to: HSASSHRPRPRP*AAAPAGPALRA
Trigger: CGCGCGGAGAGCGGGACCCGCAGGCGCGGCGGCCCAGGGACGGGGACGCGGCCGGTGAGAGGACGCAGAATG
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582131.1
ENST00000585077.1
CDS CCA 72 bp CGATTGCTCGGGCCTGGCCGCCAGCCCAGGGGCCGATaGCCGAGCGCGTCGCACTCGCGTCCCTGCGCCGTG +
Preference number: 6 (lower is better)
Translates to: RLLGPGRQPRGR*PSASHSRPCAV
Trigger: CACGGCGCAGGGACGCGAGTGCGACGCGCTCGGCCATCGGCCCCTGGGCTGGCGGCCAGGCCCGAGCAATCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000337014.10
CDS GCA 72 bp TCACCGGCCGCGTCCCCGTCCCTGGGCCGCCGCGCCTaGGGGTCCCGCTCTCCGCGCGTCTCGGCCATTTTT +
Preference number: 6 (lower is better)
Translates to: SPAASPSLGRRA*GSRSPRVSAIF
Trigger: AAAAATGGCCGAGACGCGCGGAGAGCGGGACCCGCAGGCGCGGCGGCCCAGGGACGGGGACGCGGCCGGTGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582131.1
ENST00000585077.1
CDS GCA 72 bp GGAGCAGGTAGCGGTGAGGAGGGGAAGGGCGCGCGCTaGGGCGGCGGACAGGGCCATGGAGTGGGCGGGACT +
Preference number: 6 (lower is better)
Translates to: GAGSGEEGKGAR*GGGQGHGVGGT
Trigger: AGTCCCGCCCACTCCATGGCCCTGTCCGCCGCCGCAGCGCGCGCCCTTCCCCTCCTCACCGCTACCTGCTCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000337014.10
CDS GCA 72 bp AGGGGCCGATGGCCGAGCGCGTCGCACTCGCGTCCCTaGGCCGTGCCTGCCTCGCGCTCCCTGTTACGGCGT +
Preference number: 6 (lower is better)
Translates to: RGRWPSASHSRP*AVPASRSLLRR
Trigger: ACGCCGTAACAGGGAGCGCGAGGCAGGCACGGCGCAGGGACGCGAGTGCGACGCGCTCGGCCATCGGCCCCT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000327949.15
ENST00000337014.10
CDS CCA 72 bp CCACAGTCCAGCAGGGTGGTTGGAGCACTGGGTGCTTaGCCTCCTGCCCTCCGGGTCTTTCGGGGAGGGGCC +
Preference number: 6 (lower is better)
Translates to: PQSSRVVGALGA*PPALRVFRGGA
Trigger: GGCCCCTCCCCGAAAGACCCGGAGGGCAGGAGGCCAAGCACCCAGTGCTCCAACCACCCTGCTGGACTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000585077.1
CDS CCA 72 bp TGGACACGCCTCCCGGGGCTGTACCCAGAGCCAACATaGGAGCCGCCTGAGACAGCCAGGCCCGGGTCTCAG +
Preference number: 6 (lower is better)
Translates to: WTRLPGLYPEPT*EPPETARPGSQ
Trigger: CTGAGACCCGGGCCTGGCTGTCTCAGGCGGCTCCCATGTTGGCTCTGGGTACAGCCCCGGGAGGCGTGTCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644886.1
CDS GCA 72 bp CCCCACACCTGCTCGGCCAGGTGGGCAGGACGTGTGTaGAGCAAAGGTGGAGCCGTTCCCCACCTCCGACCT +
Preference number: 6 (lower is better)
Translates to: PHTCSARWAGRV*SKGGAVPHLRP
Trigger: AGGTCGGAGGTGGGGAACGGCTCCACCTTTGCTGCACACACGTCCTGCCCACCTGGCCGAGCAGGTGTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000585077.1
CDS CCA 72 bp GGGAAGTGCCCCAGTCACGGGTGGCGGATGGGGCCGTaGGCAAGGGACACGCGTAGAAGCAACTGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: GKCPSHGWRMGP*ARDTRRSNCRQ
Trigger: CTGCCTGCAGTTGCTTCTACGCGTGTCCCTTGCCCACGGCCCCATCCGCCACCCGTGACTGGGGCACTTCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578616.5
CDS CAA 72 bp ACCACAGTCCAGCAGGGTGGTTGGAGCACTGGGTGCTaGGCCTCCTGCCCTCCGGGTCTTTCGGGGAGGGGC +
Preference number: 6 (lower is better)
Translates to: TTVQQGGWSTGC*ASCPPGLSGRG
Trigger: GCCCCTCCCCGAAAGACCCGGAGGGCAGGAGGCCAAGCACCCAGTGCTCCAACCACCCTGCTGGACTGTGGT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000585077.1
CDS GCA 72 bp ACCACCACAGTCCAGCAGGGTGGTTGGAGCACTGGGTaGTTGGCCTCCTGCCCTCCGGGTCTTTCGGGGAGG +
Preference number: 6 (lower is better)
Translates to: TTTVQQGGWSTG*LASCPPGLSGR
Trigger: CCTCCCCGAAAGACCCGGAGGGCAGGAGGCCAAGCACCCAGTGCTCCAACCACCCTGCTGGACTGTGGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000585077.1
CDS CCA 72 bp GAGGACCACCACAGTCCAGCAGGGTGGTTGGAGCACTaGGTGCTTGGCCTCCTGCCCTCCGGGTCTTTCGGG +
Preference number: 6 (lower is better)
Translates to: EDHHSPAGWLEH*VLGLLPSGSFG
Trigger: CCCGAAAGACCCGGAGGGCAGGAGGCCAAGCACCCAGTGCTCCAACCACCCTGCTGGACTGTGGTGGTCCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000585077.1
CDS CAA 90 bp GAGCTGCGCAGATGGAGGCTGACTTGTGTGACAAGGGCAAGGATGTaGCTGCCAGGGAAGGAGCCGGCCCCCTCCCTGCGGAGAGCCCTG +
Preference number: 6 (lower is better)
Translates to: ELRRWRLTCVTRARM*LPGKEPAPSLRRAL
Trigger: CAGGGCTCTCCGCAGGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTCACACAAGTCAGCCTCCATCTGCGCAGCTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000337014.10
CDS TCA 72 bp CTCACTAGGAAAACACTGGTGGAACAGGGAGGGAGGTaGGGCACCGGTGCACGGTGGCCGTCCCGAGGCACC +
Preference number: 6 (lower is better)
Translates to: LTRKTLVEQGGR*GTGARWPSRGT
Trigger: GGTGCCTCGGGACGGCCACCGTGCACCGGTGCCTCACCTCCCTCCCTGTTCCACCAGTGTTTTCCTAGTGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644886.1
CDS GCA 72 bp GTGTCTGAGGGGTGCCTCCCGCGTCACTCTCCAGCCTaGTTTGGGCTTAGGCCTGGAGACCCAGACACAGGC +
Preference number: 6 (lower is better)
Translates to: VSEGCLPRHSPA*FGLRPGDPDTG
Trigger: GCCTGTGTCTGGGTCTCCAGGCCTAAGCCCAAAGCAGGCTGGAGAGTGACGCGGGAGGCACCCCTCAGACAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000585077.1
CDS CCA 72 bp CTCGGCCAGGTGGGCAGGACGTGTGTGCAGCAAAGGTaGAGCCGTTCCCCACCTCCGACCTGCGTGCATTTC +
Preference number: 6 (lower is better)
Translates to: LGQVGRTCVQQR*SRSPPPTCVHF
Trigger: GAAATGCACGCAGGTCGGAGGTGGGGAACGGCTCCACCTTTGCTGCACACACGTCCTGCCCACCTGGCCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000585077.1
CDS CCA 72 bp CTGGGGTTCGTGGCACGTCATGACCATCTTGGCTGCTaGCACCGCGGGGCATCCTCCTGGGTCTTCACACTG +
Preference number: 6 (lower is better)
Translates to: LGFVARHDHLGC*HRGASSWVFTL
Trigger: CAGTGTGAAGACCCAGGAGGATGCCCCGCGGTGCCAGCAGCCAAGATGGTCATGACGTGCCACGAACCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000583978.5
CDS CAA 72 bp AGATGGAGGCTGACTTGTGTGACAAGGGCAAGGATGTaGCTGCCAGGGAAGGAGCCGGCCCCCTCCAGGGTC +
Preference number: 6 (lower is better)
Translates to: RWRLTCVTRARM*LPGKEPAPSRV
Trigger: GACCCTGGAGGGGGCCGGCTCCTTCCCTGGCAGCAACATCCTTGCCCTTGTCACACAAGTCAGCCTCCATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000582131.1
CDS TCA 72 bp TCCGACCTGCGTGCATTTCTGCGGATTCACTGTGTCTaGGGGGTGCCTCCCGCGTCACTCTCCAGCCTGCTT +
Preference number: 6 (lower is better)
Translates to: SDLRAFLRIHCV*GVPPASLSSLL
Trigger: AAGCAGGCTGGAGAGTGACGCGGGAGGCACCCCTCAGACACAGTGAATCCGCAGAAATGCACGCAGGTCGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000585077.1
CDS GCA 72 bp AGCAAAGGTGGAGCCGTTCCCCACCTCCGACCTGCGTaGATTTCTGCGGATTCACTGTGTCTGAGGGGTGCC +
Preference number: 6 (lower is better)
Translates to: SKGGAVPHLRPA*ISADSLCLRGA
Trigger: GGCACCCCTCAGACACAGTGAATCCGCAGAAATGCACGCAGGTCGGAGGTGGGGAACGGCTCCACCTTTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000585077.1
CDS GCA 72 bp GTGCAGCAAAGGTGGAGCCGTTCCCCACCTCCGACCTaGGTGCATTTCTGCGGATTCACTGTGTCTGAGGGG +
Preference number: 6 (lower is better)
Translates to: VQQRWSRSPPPT*VHFCGFTVSEG
Trigger: CCCCTCAGACACAGTGAATCCGCAGAAATGCACGCAGGTCGGAGGTGGGGAACGGCTCCACCTTTGCTGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000585077.1
CDS GCA 72 bp TGCGTGCATTTCTGCGGATTCACTGTGTCTGAGGGGTaGCTCCCGCGTCACTCTCCAGCCTGCTTTGGGCTT +
Preference number: 6 (lower is better)
Translates to: CVHFCGFTVSEG*LPRHSPACFGL
Trigger: AAGCCCAAAGCAGGCTGGAGAGTGACGCGGGAGGCACCCCTCAGACACAGTGAATCCGCAGAAATGCACGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582429.5
ENST00000585077.1
CDS CCA 72 bp GGGAAGTGCCCCAGTCACGGGTGGCGGATGGGGCCGTaGGCAAGGGACACTGCAAATACCGTCAATATTAAC +
Preference number: 6 (lower is better)
Translates to: GKCPSHGWRMGP*ARDTANTVNIN
Trigger: GTTAATATTGACGGTATTTGCAGTGTCCCTTGCCCACGGCCCCATCCGCCACCCGTGACTGGGGCACTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000582131.1
ENST00000585077.1
CDS GCA 72 bp GTCCCGCTCTCCGCGCGTCTCGGCCATTTTTCTTTCTaGATCAGCACCACGCAGTCGCTAATTTCCCGTGTG +
Preference number: 6 (lower is better)
Translates to: VPLSARLGHFSF*ISTTQSLISRV
Trigger: CACACGGGAAATTAGCGACTGCGTGGTGCTGATGCAGAAAGAAAAATGGCCGAGACGCGCGGAGAGCGGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000582131.1
ENST00000582429.5
ENST00000583354.5
ENST00000585077.1
CDS GCA 72 bp GGGAGACTCCAGAGTGTACGTGGCCCCTGGTTCACCTaGTCACTAGGAAAACACTGGTGGAACAGGGAGGGA +
Preference number: 6 (lower is better)
Translates to: GRLQSVRGPWFT*SLGKHWWNREG
Trigger: TCCCTCCCTGTTCCACCAGTGTTTTCCTAGTGAGCAGGTGAACCAGGGGCCACGTACACTCTGGAGTCTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644886.1
CDS CCA 72 bp TGCTGCTGCCACCATCTTGCTCCACCGAGAACCTTGTaGTTGTGTTCTAGGTACCCGTTTCCACAGAACACT +
Preference number: 6 (lower is better)
Translates to: CCCHHLAPPRTL*LCSRYPFPQNT
Trigger: AGTGTTCTGTGGAAACGGGTACCTAGAACACAACCACAAGGTTCTCGGTGGAGCAAGATGGTGGCAGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583978.5
CDS CAA 72 bp TGCTGCCACCATCTTGCTCCACCGAGAACCTTGTGGTaGTGTTCTAGGTACCCGTTTCCACAGAACACTGCT +
Preference number: 6 (lower is better)
Translates to: CCHHLAPPRTLW*CSRYPFPQNTA
Trigger: AGCAGTGTTCTGTGGAAACGGGTACCTAGAACACAACCACAAGGTTCTCGGTGGAGCAAGATGGTGGCAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000583978.5
CDS CAA 90 bp TCCATGTGTCCAAATGTCTGCACCAAGGGAATCACCTCCAGCTCATaGAGTCCAGCCAGATGCAAGATCTCTTTGATTTCAGAGGGGCTC +
Preference number: 6 (lower is better)
Translates to: SMCPNVCTKGITSSS*SPARCKISLISEGL
Trigger: GAGCCCCTCTGAAATCAAAGAGATCTTGCATCTGGCTGGACTCAATGAGCTGGAGGTGATTCCCTTGGTGCAGACATTTGGACACATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000580235.5
CDS TCA 72 bp AGTAATGCTCTAGAGGTAAAAGGGAGTCCTTACCTCTaGGAGGTACGAGACCTTTGGTGGAGCTCCTTTAAG +
Preference number: 6 (lower is better)
Translates to: SNALEVKGSPYL*EVRDLWWSSFK
Trigger: CTTAAAGGAGCTCCACCAAAGGTCTCGTACCTCTCAGAGGTAAGGACTCCCTTTTACCTCTAGAGCATTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000583978.5
CDS CCA 72 bp TTGTCATCCTGGTTGTTCTGTTTTTGTGAGAGGCTATaGAGGAAATTCAAAATCAATGCTGCTGCCACCATC +
Preference number: 6 (lower is better)
Translates to: LSSWLFCFCERL*RKFKINAAATI
Trigger: GATGGTGGCAGCAGCATTGATTTTGAATTTCCTCCATAGCCTCTCACAAAAACAGAACAACCAGGATGACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000583978.5