RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HEXA (Homo sapiens)

Ensembl gene IDs: ENSG00000213614

Ensembl transcript IDs: ENST00000268097.10, ENST00000563762.5, ENST00000563908.2, ENST00000564677.5, ENST00000565873.1, ENST00000566304.5, ENST00000566672.5, ENST00000567027.5, ENST00000567027.6, ENST00000567159.5, ENST00000567213.2, ENST00000567411.5, ENST00000568260.1, ENST00000568260.2, ENST00000568777.5, ENST00000569116.1, ENST00000569410.5, ENST00000569509.5, ENST00000682061.1, ENST00000682064.1, ENST00000682177.1, ENST00000682235.1, ENST00000682461.1, ENST00000682653.1, ENST00000682657.1, ENST00000682721.1, ENST00000682843.1, ENST00000683003.1, ENST00000683133.1, ENST00000683228.1, ENST00000683243.1, ENST00000683463.1, ENST00000683548.1, ENST00000683579.1, ENST00000683587.1, ENST00000683681.1, ENST00000683735.1, ENST00000683742.1, ENST00000683853.1, ENST00000683860.1, ENST00000683884.1, ENST00000684041.1, ENST00000684125.1, ENST00000684203.1, ENST00000684231.1, ENST00000684263.1, ENST00000684305.1, ENST00000684415.1, ENST00000684520.1, ENST00000684602.1, ENST00000684667.1

Found 821 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCAGCACCCTCCTCGGTGCCTGGGGCTCAGGTCTGTTCAAACTCCTaGTCACAGAAGCCTACATTGAGGGGTTGGGCCTGGACACCTCGC +
Preference number: 1 (lower is better)
Translates to: PAPSSVPGAQVCSNS*SQKPTLRGWAWTPR
Trigger: GCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGAGTTTGAACAGACCTGAGCCCCAGGCACCGAGGAGGGTGCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR GCA 90 bp AGCCTGGCTCCACTACCATTCACCTACAGCCAGCACCCTCCTCGGTaGCTGGGGCTCAGGTCTGTTCAAACTCCTGCTCACAGAAGCCTA +
Preference number: 1 (lower is better)
Translates to: SLAPLPFTYSQHPPR*LGLRSVQTPAHRSL
Trigger: TAGGCTTCTGTGAGCAGGAGTTTGAACAGACCTGAGCCCCAGGCACCGAGGAGGGTGCTGGCTGTAGGTGAATGGTAGTGGAGCCAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR TCA 90 bp CTGGGGCTCAGGTCTGTTCAAACTCCTGCTCACAGAAGCCTACATTaGGGGGTTGGGCCTGGACACCTCGCCTCAGCAATTCACAGCGGA +
Preference number: 1 (lower is better)
Translates to: LGLRSVQTPAHRSLH*GVGPGHLASAIHSG
Trigger: TCCGCTGTGAATTGCTGAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGAGTTTGAACAGACCTGAGCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR GCA 90 bp GTCTGGGTCCACGACGAGACATTTCCTTCTAGAGAAAATCACACCTaGAAAGACCCTCTCCAGAGCCACCGCCCACCTCCGCGCAGCCAT +
Preference number: 1 (lower is better)
Translates to: VWVHDETFPSRENHT*KDPLQSHRPPPRSH
Trigger: ATGGCTGCGCGGAGGTGGGCGGTGGCTCTGGAGAGGGTCTTTGCAGGTGTGATTTTCTCTAGAAGGAAATGTCTCGTCGTGGACCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR TCA 90 bp TCAGGTACCAGGGGGCAGAGAGAAGGGCCCGGAAGCCGGCCTTGGTaGCCAGTTCCAGCTCCTTCATATAGTTCACTGGAATATCCTCTC +
Preference number: 1 (lower is better)
Translates to: SGTRGQREGPGSRPW*PVPAPSYSSLEYPL
Trigger: GAGAGGATATTCCAGTGAACTATATGAAGGAGCTGGAACTGGTCACCAAGGCCGGCTTCCGGGCCCTTCTCTCTGCCCCCTGGTACCTGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR GCA 90 bp AGTAACATGAAAGTTATGACCAGGAGGGAAGCAGGGTCGCACCTGTaGAGGGTCCTTGTCTGCGGACCACCCCTCCTACAAGCTTCTGGG +
Preference number: 1 (lower is better)
Translates to: SNMKVMTRREAGSHL*RVLVCGPPLLQASG
Trigger: CCCAGAAGCTTGTAGGAGGGGTGGTCCGCAGACAAGGACCCTGCACAGGTGCGACCCTGCTTCCCTCCTGGTCATAACTTTCATGTTACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR GCA 90 bp GATACCTGGTCCCCAGGACAAAGTGTGGCCAGGAGTGTCAAACTCTaGAAGCACACGGATACCCCGGAGCCGTGCGTATTCAATGACCTC +
Preference number: 1 (lower is better)
Translates to: DTWSPGQSVARSVKL*KHTDTPEPCVFNDL
Trigger: GAGGTCATTGAATACGCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGGACCAGGTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR GCA 90 bp ACTTCCTGGTCCCCAGGACAAAGTGTGGCCAGGAGTGTCAAACTCTaGAAGCACACGGATACCCCGGAGCCGTGCGTATTCAATGACCTC +
Preference number: 1 (lower is better)
Translates to: TSWSPGQSVARSVKL*KHTDTPEPCVFNDL
Trigger: GAGGTCATTGAATACGCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGGACCAGGAAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR CCA 90 bp CTGTCCCAGAAGTCTAGGGGCAATGACTCTCCATCACTAGTGCTGTaGTGGCACCTGTGCTCCCACATCCTGATATCCTACCCCTACGGC +
Preference number: 1 (lower is better)
Translates to: LSQKSRGNDSPSLVL*WHLCSHILISYPYG
Trigger: GCCGTAGGGGTAGGATATCAGGATGTGGGAGCACAGGTGCCACCACAGCACTAGTGATGGAGAGTCATTGCCCCTAGACTTCTGGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CCA 90 bp TGGCTCCACTACCATTCACCTACAGCCAGCACCCTCCTCGGTGCCTaGGGCTCAGGTCTGTTCAAACTCCTGCTCACAGAAGCCTACATT +
Preference number: 1 (lower is better)
Translates to: WLHYHSPTASTLLGA*GSGLFKLLLTEAYI
Trigger: AATGTAGGCTTCTGTGAGCAGGAGTTTGAACAGACCTGAGCCCCAGGCACCGAGGAGGGTGCTGGCTGTAGGTGAATGGTAGTGGAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR TCA 90 bp TGCATTACTGCCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTaGAACCAGGAGGGGGCAGTCTGGGTCCACGACGAGACATTTCCT +
Preference number: 1 (lower is better)
Translates to: CITAPASGLQYHFCI*NQEGAVWVHDETFP
Trigger: AGGAAATGTCTCGTCGTGGACCCAGACTGCCCCCTCCTGGTTTCAGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGGCAGTAATGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CCA 90 bp GGCTCCTGTGGTGGGTGCCAGTGCTGGGACCTTAACTTGTGTATCTaGGCTATAGCCCTGGACTTGGCTAGGCTGGGCTGTGTGAAAATT +
Preference number: 1 (lower is better)
Translates to: GSCGGCQCWDLNLCI*AIALDLARLGCVKI
Trigger: AATTTTCACACAGCCCAGCCTAGCCAAGTCCAGGGCTATAGCCCAGATACACAAGTTAAGGTCCCAGCACTGGCACCCACCACAGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CCA 90 bp GGCCTGCTCTCTCTCAGGCCTGAAAGAAGGGTACTAGTCCAGAGGTaGCTAGATGGGATTGGGTCTCTAAGGGAGAACTCCTGCTCTCAG +
Preference number: 1 (lower is better)
Translates to: GLLSLRPERRVLVQR*LDGIGSLRENSCSQ
Trigger: CTGAGAGCAGGAGTTCTCCCTTAGAGACCCAATCCCATCTAGCCACCTCTGGACTAGTACCCTTCTTTCAGGCCTGAGAGAGAGCAGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR TCA 90 bp ACCAGGACCTCGAAGGAACATGACCCAGGGGCTGAAGGATGGTGTTaGAGGACCGAGTTTTACTCAGATCCTTCTCAGCCCTGCCTTCCT +
Preference number: 1 (lower is better)
Translates to: TRTSKEHDPGAEGWC*RTEFYSDPSQPCLP
Trigger: AGGAAGGCAGGGCTGAGAAGGATCTGAGTAAAACTCGGTCCTTCAACACCATCCTTCAGCCCCTGGGTCATGTTCCTTCGAGGTCCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR TCA 90 bp CAAATCTTCAGAAGGCTCGTTGCACGGCCTGCTCTCTCTCAGGCCTaGAAGAAGGGTACTAGTCCAGAGGTGGCTAGATGGGATTGGGTC +
Preference number: 1 (lower is better)
Translates to: QIFRRLVARPALSQA*KKGTSPEVARWDWV
Trigger: GACCCAATCCCATCTAGCCACCTCTGGACTAGTACCCTTCTTTCAGGCCTGAGAGAGAGCAGGCCGTGCAACGAGCCTTCTGAAGATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR GCA 90 bp GCCAGGAGTGTCAAACTCTGCAAGCACACGGATACCCCGGAGCCGTaGGTATTCAATGACCTCCTTCACATCCTGTGCTGTGTAGATGTG +
Preference number: 1 (lower is better)
Translates to: ARSVKLCKHTDTPEP*VFNDLLHILCCVDV
Trigger: CACATCTACACAGCACAGGATGTGAAGGAGGTCATTGAATACGCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
3UTR GCA 90 bp GTGACAAACGTTCATAGGCAAATGTCAGGTCAGATGTCAACTTGTTaGTCCACAGCCTTTCGGCAACAGCCCCTGCTCTGGGCCAGAGCC +
Preference number: 1 (lower is better)
Translates to: VTNVHRQMSGQMSTC*STAFRQQPLLWARA
Trigger: GGCTCTGGCCCAGAGCAGGGGCTGTTGCCGAAAGGCTGTGGAGCAACAAGTTGACATCTGACCTGACATTTGCCTATGAACGTTTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567027.5
ENST00000567411.5
3UTR CCA 90 bp TCCCAGAAGTCTAGGGGCAATGACTCTCCATCACTAGTGCTGTGGTaGCACCTGTGCTCCCACATCCTGATATCCTACCCCTACGGCAAT +
Preference number: 1 (lower is better)
Translates to: SQKSRGNDSPSLVLW*HLCSHILISYPYGN
Trigger: ATTGCCGTAGGGGTAGGATATCAGGATGTGGGAGCACAGGTGCCACCACAGCACTAGTGATGGAGAGTCATTGCCCCTAGACTTCTGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR TCA 90 bp GTTTCATTCCCAGCCCTCAACTTAAAAGACCTCAGGGGCAGACACTaGCTCCAGCCTGGCTGTGCCCTTACCCTAACGCCATTCACACTT +
Preference number: 1 (lower is better)
Translates to: VSFPALNLKDLRGRH*LQPGCALTLTPFTL
Trigger: AAGTGTGAATGGCGTTAGGGTAAGGGCACAGCCAGGCTGGAGTCAGTGTCTGCCCCTGAGGTCTTTTAAGTTGAGGGCTGGGAATGAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR GCA 90 bp TCTAGGGGCAATGACTCTCCATCACTAGTGCTGTGGTGGCACCTGTaGTCCCACATCCTGATATCCTACCCCTACGGCAATCCTTTGAGA +
Preference number: 1 (lower is better)
Translates to: SRGNDSPSLVLWWHL*SHILISYPYGNPLR
Trigger: TCTCAAAGGATTGCCGTAGGGGTAGGATATCAGGATGTGGGAGCACAGGTGCCACCACAGCACTAGTGATGGAGAGTCATTGCCCCTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR GCA 90 bp GATACCCCGGAGCCGTGCGTATTCAATGACCTCCTTCACATCCTGTaGTGTGTAGATGTGGGTGACAGGGTTGTAGGACCCCTTTCTCAT +
Preference number: 1 (lower is better)
Translates to: DTPEPCVFNDLLHIL*CVDVGDRVVGPLSH
Trigger: ATGAGAAAGGGGTCCTACAACCCTGTCACCCACATCTACACAGCACAGGATGTGAAGGAGGTCATTGAATACGCACGGCTCCGGGGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
3UTR TCA 90 bp GGGGATGGAAGTCGCCTACGTTATTTTGGAATTGACCAGGGCCTCTaGGTCCTTCAAATTCAACAATTTACCACAGGCCCGCGTGCGGTG +
Preference number: 1 (lower is better)
Translates to: GDGSRLRYFGIDQGL*VLQIQQFTTGPRAV
Trigger: CACCGCACGCGGGCCTGTGGTAAATTGTTGAATTTGAAGGACTCAGAGGCCCTGGTCAATTCCAAAATAACGTAGGCGACTTCCATCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR TCA 90 bp GCCTGTGTTCCGCTCAGGGGTGGGACTTTCAATTTACAGCCTAGGTaGAGGGAGATGAGTTGGGGCAACAGCGATTCTGTTCATTGGAAC +
Preference number: 1 (lower is better)
Translates to: ACVPLRGGTFNLQPR*REMSWGNSDSVHWN
Trigger: GTTCCAATGAACAGAATCGCTGTTGCCCCAACTCATCTCCCTTCACCTAGGCTGTAAATTGAAAGTCCCACCCCTGAGCGGAACACAGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CCA 90 bp TTTATTGTACGCCATGACATCCAGAGTGTCCAGGATGCTAGAGAGTaGCAGGTAATGGCGAGATGTATCCAACAGCAAGCCCCGGTGAGG +
Preference number: 1 (lower is better)
Translates to: FIVRHDIQSVQDARE*QVMARCIQQQAPVR
Trigger: CCTCACCGGGGCTTGCTGTTGGATACATCTCGCCATTACCTGCCACTCTCTAGCATCCTGGACACTCTGGATGTCATGGCGTACAATAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567411.5
ENST00000568260.1
3UTR TCA 90 bp GGGTTGGGCCTGGACACCTCGCCTCAGCAATTCACAGCGGAAGTGTaGCAAACGTTCATAGGCAAATGTCAGGTCAGATGTCAACTTGTT +
Preference number: 1 (lower is better)
Translates to: GLGLDTSPQQFTAEV*QTFIGKCQVRCQLV
Trigger: AACAAGTTGACATCTGACCTGACATTTGCCTATGAACGTTTGTCACACTTCCGCTGTGAATTGCTGAGGCGAGGTGTCCAGGCCCAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR TCA 90 bp ACCAAAGGGCAGCTGGAGGGATATAGACGGAAGTCATGTGGAGAGTaGATATTGCACACAAATCTTCAGAAGGCTCGTTGCACGGCCTGC +
Preference number: 1 (lower is better)
Translates to: TKGQLEGYRRKSCGE*ILHTNLQKARCTAC
Trigger: GCAGGCCGTGCAACGAGCCTTCTGAAGATTTGTGTGCAATATTCACTCTCCACATGACTTCCGTCTATATCCCTCCAGCTGCCCTTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR GCA 90 bp AGTGACCTAGCTTTATTAGATTCCTCGAAGGGAAGGTACCTGGCATaGAGCCTCAGCTCCTACCAAGGAGAGGAGAGGTTGAAGACTCTC +
Preference number: 1 (lower is better)
Translates to: SDLALLDSSKGRYLA*SLSSYQGEERLKTL
Trigger: GAGAGTCTTCAACCTCTCCTCTCCTTGGTAGGAGCTGAGGCTGCATGCCAGGTACCTTCCCTTCGAGGAATCTAATAAAGCTAGGTCACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CCA 90 bp TGGAACAGACTGGGTGGTAACTGCAGGCCACTGCAGTTGACCTGTTaGCATTCGAGGTCTGACGACCTTCAGGTAAATGCTCTTATGATC +
Preference number: 1 (lower is better)
Translates to: WNRLGGNCRPLQLTC*HSRSDDLQVNALMI
Trigger: GATCATAAGAGCATTTACCTGAAGGTCGTCAGACCTCGAATGCCAACAGGTCAACTGCAGTGGCCTGCAGTTACCACCCAGTCTGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CCA 90 bp GAAGCCGGCCTTGGTGACCAGTTCCAGCTCCTTCATATAGTTCACTaGAATATCCTCTCGCCACACCTGTATGATTGTGTCTGGCTGAAT +
Preference number: 1 (lower is better)
Translates to: EAGLGDQFQLLHIVH*NILSPHLYDCVWLN
Trigger: ATTCAGCCAGACACAATCATACAGGTGTGGCGAGAGGATATTCCAGTGAACTATATGAAGGAGCTGGAACTGGTCACCAAGGCCGGCTTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR TCA 90 bp TGGTTGGGAGGAGGGGGATGGAAGTCGCCTACGTTATTTTGGAATTaGCCAGGGCCTCTGAGTCCTTCAAATTCAACAATTTACCACAGG +
Preference number: 1 (lower is better)
Translates to: WLGGGGWKSPTLFWN*PGPLSPSNSTIYHR
Trigger: CCTGTGGTAAATTGTTGAATTTGAAGGACTCAGAGGCCCTGGTCAATTCCAAAATAACGTAGGCGACTTCCATCCCCCTCCTCCCAACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CCA 90 bp GAATGTGCTCATGAACTCATAGGTATTATTGAGACTGGGATTCACTaGTCCAAAGGTGCCAGAGGGCTCAGACCCAGAGTAGCAAGGAGT +
Preference number: 1 (lower is better)
Translates to: ECAHELIGIIETGIH*SKGARGLRPRVARS
Trigger: ACTCCTTGCTACTCTGGGTCTGAGCCCTCTGGCACCTTTGGACCAGTGAATCCCAGTCTCAATAATACCTATGAGTTCATGAGCACATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR TCA 90 bp GAAGGCCCCACAGCTTGCTTACCTCAGCAATTCACAGCGGAAGTGTaGCAAACGTTCATAGGCAAATGTCAGGTCAGATGTCAACTTGTT +
Preference number: 1 (lower is better)
Translates to: EGPTACLPQQFTAEV*QTFIGKCQVRCQLV
Trigger: AACAAGTTGACATCTGACCTGACATTTGCCTATGAACGTTTGTCACACTTCCGCTGTGAATTGCTGAGGTAAGCAAGCTGTGGGGCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567027.5
3UTR GCA 90 bp TTAACAAATAACCGCCAAGGAAATCCTCACCTAAAATGGCTGCGATaGATTACTGCCCCCGCCTCTGGCTTACAGTATCACTTCTGCATC +
Preference number: 1 (lower is better)
Translates to: LTNNRQGNPHLKWLR*ITAPASGLQYHFCI
Trigger: GATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGGCAGTAATGCATCGCAGCCATTTTAGGTGAGGATTTCCTTGGCGGTTATTTGTTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CCA 90 bp CCAAAGAACTTAACAAATAACCGCCAAGGAAATCCTCACCTAAAATaGCTGCGATGCATTACTGCCCCCGCCTCTGGCTTACAGTATCAC +
Preference number: 1 (lower is better)
Translates to: PKNLTNNRQGNPHLK*LRCITAPASGLQYH
Trigger: GTGATACTGTAAGCCAGAGGCGGGGGCAGTAATGCATCGCAGCCATTTTAGGTGAGGATTTCCTTGGCGGTTATTTGTTAAGTTCTTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CCA 90 bp GTAGGACCCCTTTCTCATGAGCTCTGGAAAAGTGAAGCTCTCATATaGGAAGGAAGGATCATCTACCAGATGCCAGTGGAACACGTTCAA +
Preference number: 1 (lower is better)
Translates to: VGPLSHELWKSEALI*EGRIIYQMPVEHVQ
Trigger: TTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTTCCAGAGCTCATGAGAAAGGGGTCCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
3UTR CCA 90 bp GTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGATGCCAGTaGAACACGTTCAATTTATTGTACGCCATGACATCCTCGGAGAGC +
Preference number: 1 (lower is better)
Translates to: VKLSYGKEGSSTRCQ*NTFNLLYAMTSSES
Trigger: GCTCTCCGAGGATGTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR TCA 90 bp ACAACCAACACATTCTTCTCCAGTGTATGCCGTTTCCCTAGGTTGTaGGTTCCTCAACAGGAGGGACCAATCTCAGTGTCTTTGTATTCC +
Preference number: 1 (lower is better)
Translates to: TTNTFFSSVCRFPRL*VPQQEGPISVSLYS
Trigger: GGAATACAAAGACACTGAGATTGGTCCCTCCTGTTGAGGAACTCACAACCTAGGGAAACGGCATACACTGGAGAAGAATGTGTTGGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR CCA 90 bp GTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGATGCCAGTaGAACACGTTCAATTTATTGTACGCCATGACATCCAGAGTGTCC +
Preference number: 1 (lower is better)
Translates to: VKLSYGKEGSSTRCQ*NTFNLLYAMTSRVS
Trigger: GGACACTCTGGATGTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567411.5
ENST00000568260.1
3UTR GCA 90 bp GGAAAAGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGATaGCAGTGGAACACGTTCAATTTATTGTACGCCATGACATCCTCG +
Preference number: 1 (lower is better)
Translates to: GKVKLSYGKEGSSTR*QWNTFNLLYAMTSS
Trigger: CGAGGATGTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR GCA 90 bp GGAAAAGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGATaGCAGTGGAACACGTTCAATTTATTGTACGCCATGACATCCAGA +
Preference number: 1 (lower is better)
Translates to: GKVKLSYGKEGSSTR*QWNTFNLLYAMTSR
Trigger: TCTGGATGTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567411.5
ENST00000568260.1
3UTR TCA 90 bp AGGCACAGAGTTAAGGGGTTAATAAACACTTTCTCAGCTGACTCCTaGATGAATCATGTTCCACATCCTGAGTCCTCCAATGTATACTGT +
Preference number: 1 (lower is better)
Translates to: RHRVKGLINTFSADS*MNHVPHPESSNVYC
Trigger: ACAGTATACATTGGAGGACTCAGGATGTGGAACATGATTCATTCAGGAGTCAGCTGAGAAAGTGTTTATTAACCCCTTAACTCTGTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567213.2
3UTR TCA 90 bp ACTCAAATTTTTCATAAACCAGGCCCAGGCTACCCACATACACCTTaGTCAAGTTTAGCTTCTTGGACTCAGTACTATACAGGGATACTA +
Preference number: 1 (lower is better)
Translates to: TQIFHKPGPGYPHTP*SSLASWTQYYTGIL
Trigger: TAGTATCCCTGTATAGTACTGAGTCCAAGAAGCTAAACTTGATCAAGGTGTATGTGGGTAGCCTGGGCCTGGTTTATGAAAAATTTGAGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567213.2
3UTR-3UTR TCA 90 bp CACACCTGCAAAGACCCTCTCCAGAGCCACCGCCCACCTCCGCGCAGCCATCCAGGAGAGGCTCTTCTGTaGCCAGGTTGGGTCTGGAGC +
Preference number: 2 (lower is better)
Translates to: HTCKDPLQSHRPPPRSHPGEALL*PGWVWS
Trigger: GCTCCAGACCCAACCTGGTCACAGAAGAGCCTCTCC...TGGATGGCTGCGCGGAGGTGGGCGGTGGCTCTGGAGAGGGTCTTTGCAGGTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR TCA 90 bp GAATGCGAGCGCCAGCACCGGCCCCTTTCTCTCCAAGCACAGGGGCACGCAGGCAGGCAGAGGCTGCAGTaGGCCAAGATTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: ECERQHRPLSLQAQGHAGRQRLQ*AKIVPL
Trigger: CAGTGGCACAATCTTGGCTCACTGCAGCCTCTGCCT...GCCTGCGTGCCCCTGTGCTTGGAGAGAAAGGGGCCGGTGCTGGCGCTCGCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR TCA 90 bp GAATGCGAGCGCCAGCACCGGCCCCTTTCTCTCCAAGCACAGGGGCACGCAGGCCTCGCCACACCTGTATaGTTGTGTCTGGCTGAATCT +
Preference number: 2 (lower is better)
Translates to: ECERQHRPLSLQAQGHAGLATPV*LCLAES
Trigger: AGATTCAGCCAGACACAATCATACAGGTGTGGCGAG...GCCTGCGTGCCCCTGTGCTTGGAGAGAAAGGGGCCGGTGCTGGCGCTCGCATTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR-3UTR TCA 90 bp CGCCTCTGGCTTACAGTATCACTTCTGCATCTGAAACCAGGAGGGGGCAGTCTGCTCAGGGGCAGACACTaGCTCCAGCCTGGCTGTGCC +
Preference number: 2 (lower is better)
Translates to: RLWLTVSLLHLKPGGGSLLRGRH*LQPGCA
Trigger: GGCACAGCCAGGCTGGAGTCAGTGTCTGCCCCTGAG...CAGACTGCCCCCTCCTGGTTTCAGATGCAGAAGTGATACTGTAAGCCAGAGGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR GCA 90 bp GCCTCTCCACCAATCACCAGAGCCTTCTGCTCAGGGGTACCTTCAAATGCCAGGGTCCCCTGGCCAGGATaGAGTGGAAGCCTGGCTCCA +
Preference number: 2 (lower is better)
Translates to: ASPPITRAFCSGVPSNARVPWPG*SGSLAP
Trigger: TGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGAC...CCTGGCATTTGAAGGTACCCCTGAGCAGAAGGCTCTGGTGATTGGTGGAGAGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR CAA 90 bp CCTGGGGCTCAGGTCTGTTCAAACTCCTGCTCACAGAAGCCTACATaGAGGGGTTGGGCCTGGACACCTCGCCTCAGCAATTCACAGCGG +
Preference number: 2 (lower is better)
Translates to: PGAQVCSNSCSQKPT*RGWAWTPRLSNSQR
Trigger: CCGCTGTGAATTGCTGAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGAGTTTGAACAGACCTGAGCCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR-3UTR TCA 90 bp GTCTGGAAACTTCCCCACCCCCTGGTGGTGCACAGCACACAAGATGGCCTGTGTTGCACGAGAATCGCTTaGACCCAGGAGGCAGAGGCT +
Preference number: 2 (lower is better)
Translates to: VWKLPHPLVVHSTQDGLCCTRIA*TQEAEA
Trigger: AGCCTCTGCCTCCTGGGTTCAAGCGATTCTCGTGCA...ACACAGGCCATCTTGTGTGCTGTGCACCACCAGGGGGTGGGGAAGTTTCCAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR GCA 90 bp AACCGCCAAGGAAATCCTCACCTAAAATGGCTGCGATGCATTACTGCCCCCGCCGTCCCCTGGCCAGGATaGAGTGGAAGCCTGGCTCCA +
Preference number: 2 (lower is better)
Translates to: NRQGNPHLKWLRCITAPAVPWPG*SGSLAP
Trigger: TGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGAC...GGCGGGGGCAGTAATGCATCGCAGCCATTTTAGGTGAGGATTTCCTTGGCGGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CAA 90 bp CCAGCCCTGGATCTGGCCTGCTCCGCCTTGCGAAGGCCCCACAGCTaGCTTACCTCAGCAATTCACAGCGGAAGTGTGACAAACGTTCAT +
Preference number: 2 (lower is better)
Translates to: PALDLACSALRRPHS*LTSAIHSGSVTNVH
Trigger: ATGAACGTTTGTCACACTTCCGCTGTGAATTGCTGAGGTAAGCAAGCTGTGGGGCCTTCGCAAGGCGGAGCAGGCCAGATCCAGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567027.5
3UTR-3UTR TCA 90 bp GGTCGCACCTGTGCAGGGTCCTTGTCTGCGGACCACCCCTCCTACAAGCTTCTGTCAGCCCTGCCTTCCTaGAGTTTCTGTATCCACTAC +
Preference number: 2 (lower is better)
Translates to: GRTCAGSLSADHPSYKLLSALPS*SFCIHY
Trigger: GTAGTGGATACAGAAACTTCAGGAAGGCAGGGCTGA...CAGAAGCTTGTAGGAGGGGTGGTCCGCAGACAAGGACCCTGCACAGGTGCGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR CCA 90 bp GAATGCGAGCGCCAGCACCGGCCCCTTTCTCTCCAAGCACAGGGGCACGCAGGCCTTCATATAGTTCACTaGAATATCCTCTCGCCACAC +
Preference number: 2 (lower is better)
Translates to: ECERQHRPLSLQAQGHAGLHIVH*NILSPH
Trigger: GTGTGGCGAGAGGATATTCCAGTGAACTATATGAAG...GCCTGCGTGCCCCTGTGCTTGGAGAGAAAGGGGCCGGTGCTGGCGCTCGCATTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR-3UTR GCA 90 bp CCACCCCCTGGTGGTGCACAGCACACAAGATGGCCTGTGTTCCGCTCAGGGGTGCGACCTTCAGGTAAATaGTCTTATGATCAGTGGACC +
Preference number: 2 (lower is better)
Translates to: PPPGGAQHTRWPVFRSGVRPSGK*SYDQWT
Trigger: GGTCCACTGATCATAAGAGCATTTACCTGAAGGTCG...CACCCCTGAGCGGAACACAGGCCATCTTGTGTGCTGTGCACCACCAGGGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR GCA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATGGATCATCTACCAGATaGCAGTGGAACACGTTCAAT +
Preference number: 2 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHGSSTR*QWNTFN
Trigger: ATTGAACGTGTTCCACTGGCATCTGGTAGATGATCC...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR-3UTR GCA 90 bp AGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATACCCCGGAGCCGTGCCTCCTTCACATCCTGTaGTGTGTAGATGTGGGTGAC +
Preference number: 2 (lower is better)
Translates to: SVARSVKLCKHTDTPEPCLLHIL*CVDVGD
Trigger: GTCACCCACATCTACACAGCACAGGATGTGAAGGAG...GCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
3UTR-3UTR CCA 90 bp CATGGTGGCACGTGCCTATTAATTCCAGTTACTCAGGAGGCTGATGCACGAGAAAGGGGCTCCGTCCCCTaGCCAGGATGCAGTGGAAGC +
Preference number: 2 (lower is better)
Translates to: HGGTCLLIPVTQEADARERGSVP*PGCSGS
Trigger: GCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT...TTCTCGTGCATCAGCCTCCTGAGTAACTGGAATTAATAGGCACGTGCCACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR GCA 90 bp GGCTGCGATGCATTACTGCCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTACTCCAGCCTGGCTGTaGCCTTACCCTAACGCCATT +
Preference number: 2 (lower is better)
Translates to: GCDALLPPPLAYSITSASTPAWL*PYPNAI
Trigger: AATGGCGTTAGGGTAAGGGCACAGCCAGGCTGGAGT...AGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGGCAGTAATGCATCGCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR GCA 90 bp CCTGGAACCTGTCCATTGTTACCCCAGCCCAGGGCCCAGCCAAAGAACTTAACACTAAAATGGCTGCGATaGATTACTGCCCCCGCCTCT +
Preference number: 2 (lower is better)
Translates to: PGTCPLLPQPRAQPKNLTLKWLR*ITAPAS
Trigger: AGAGGCGGGGGCAGTAATGCATCGCAGCCATTTTAG...TGTTAAGTTCTTTGGCTGGGCCCTGGGCTGGGGTAACAATGGACAGGTTCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR CCA 90 bp AACCGCCAAGGAAATCCTCACCTAAAATGGCTGCGATGCATTACTGCCCCCGCCGTGGATGAGTATGCATaGGGGAGAGGCTCTTCTGTG +
Preference number: 2 (lower is better)
Translates to: NRQGNPHLKWLRCITAPAVDEYA*GRGSSV
Trigger: CACAGAAGAGCCTCTCCCCCATGCATACTCATCCAC...GGCGGGGGCAGTAATGCATCGCAGCCATTTTAGGTGAGGATTTCCTTGGCGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR CCA 90 bp CCTGGAACCTGTCCATTGTTACCCCAGCCCAGGGCCCAGCCAAAGAACTTAACATACTGCCCCCGCCTCTaGCTTACAGTATCACTTCTG +
Preference number: 2 (lower is better)
Translates to: PGTCPLLPQPRAQPKNLTYCPRL*LTVSLL
Trigger: CAGAAGTGATACTGTAAGCCAGAGGCGGGGGCAGTA...TGTTAAGTTCTTTGGCTGGGCCCTGGGCTGGGGTAACAATGGACAGGTTCCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR CCA 90 bp AGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATACCCCGGAGCCGTGCTCCAAAGTAGGAAGCTaGTTACATCCAGGTGTGACT +
Preference number: 2 (lower is better)
Translates to: SVARSVKLCKHTDTPEPCSKVGS*LHPGVT
Trigger: AGTCACACCTGGATGTAACCAGCTTCCTACTTTGGA...GCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR-3UTR TCA 90 bp GGCTGCGATGCATTACTGCCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTCACATTACTCTTTATTaGATGCGAGCGCCAGCACCG +
Preference number: 2 (lower is better)
Translates to: GCDALLPPPLAYSITSASHITLY*MRAPAP
Trigger: CGGTGCTGGCGCTCGCATTCAATAAAGAGTAATGTG...AGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGGCAGTAATGCATCGCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR TCA 90 bp CCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTGAAACCAGGAGGGGGCAGAGACAAGTGAACATCTaGGGTCATGAGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: PPPLAYSITSASETRRGQRQVNI*GHEFKT
Trigger: GGTCTTGAACTCATGACCTCAGATGTTCACTTGTCT...CTGCCCCCTCCTGGTTTCAGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR TCA 90 bp GTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCGCCGTGCGTATTCAATaGCCTCCTTCACATCCTGTG +
Preference number: 2 (lower is better)
Translates to: VEILPVRAIGYTVQVPGGAVRIQ*PPSHPV
Trigger: CACAGGATGTGAAGGAGGTCATTGAATACGCACGGC...GCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR-3UTR GCA 90 bp AAGGATGGTGTTGAAGGACCGAGTTTTACTCAGATCCTTCTCAGCCCTGCCTTCCCAGGAGGTGGAGCTTaGAGTGAGTCGAGATCGTGC +
Preference number: 2 (lower is better)
Translates to: KDGVEGPSFTQILLSPAFPGGGA*SESRSC
Trigger: GCACGATCTCGACTCACTGCAAGCTCCACCTCCTGG...GAAGGCAGGGCTGAGAAGGATCTGAGTAAAACTCGGTCCTTCAACACCATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR GCA 90 bp TCAAACTCTGCAAGCACACGGATACCCCGGAGCCGTGCGTATTCAATGACCTCCCTCCTTCACATCCTGTaGTGTGTAGATGTGGGTGAC +
Preference number: 2 (lower is better)
Translates to: SNSASTRIPRSRAYSMTSLLHIL*CVDVGD
Trigger: GTCACCCACATCTACACAGCACAGGATGTGAAGGAG...GGAGGTCATTGAATACGCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
3UTR-3UTR GCA 90 bp TGGATCTCTGGGTTGGACTTCCAGCAGGTGAAATCAACCTCATCTCCTCCAAGATCACTGGTCCAAAGGTaGCAGAGGGCTCAGACCCAG +
Preference number: 2 (lower is better)
Translates to: WISGLDFQQVKSTSSPPRSLVQR*QRAQTQ
Trigger: CTGGGTCTGAGCCCTCTGGCACCTTTGGACCAGTGA...TCTTGGAGGAGATGAGGTTGATTTCACCTGCTGGAAGTCCAACCCAGAGATCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR-3UTR CCA 90 bp AGGATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATTGTACGCCATGACAGGGGCTCCGTCCCCTaGCCAGGATGCAGTGGAAGC +
Preference number: 2 (lower is better)
Translates to: RIIYQMPVEHVQFIVRHDRGSVP*PGCSGS
Trigger: GCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT...GTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR-3UTR CCA 90 bp GGTCGCACCTGTGCAGGGTCCTTGTCTGCGGACCACCCCTCCTACAAGCTTCTGCATATACCAACGCCTTaGAGATATAATGCAGAAGTG +
Preference number: 2 (lower is better)
Translates to: GRTCAGSLSADHPSYKLLHIPTP*RYNAEV
Trigger: CACTTCTGCATTATATCTCCAAGGCGTTGGTATATG...CAGAAGCTTGTAGGAGGGGTGGTCCGCAGACAAGGACCCTGCACAGGTGCGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR CCA 90 bp GGCTGCGATGCATTACTGCCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTTTGGGAGGAGGGGGATaGAAGTCGCCTACGTTATTT +
Preference number: 2 (lower is better)
Translates to: GCDALLPPPLAYSITSASLGGGG*KSPTLF
Trigger: AAATAACGTAGGCGACTTCCATCCCCCTCCTCCCAA...AGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGGCAGTAATGCATCGCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR GCA 90 bp GTATCATTTCAGCTTTCCTCACAGTCTCACTGTCCCAGAAGTCTAGGGGCAATGGCTGCGATGCATTACTaGCCCCGCCTCTGGCTTACA +
Preference number: 2 (lower is better)
Translates to: VSFQLSSQSHCPRSLGAMAAMHY*PRLWLT
Trigger: TGTAAGCCAGAGGCGGGGGCAGTAATGCATCGCAGC...CATTGCCCCTAGACTTCTGGGACAGTGAGACTGTGAGGAAAGCTGAAATGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR GCA 90 bp AGGGTACTAGTCCAGAGGTGGCTAGATGGGATTGGGTCTCTAAGGGAGAACTCCCTCCTTCACATCCTGTaGTGTGTAGATGTGGGTGAC +
Preference number: 2 (lower is better)
Translates to: RVLVQRWLDGIGSLRENSLLHIL*CVDVGD
Trigger: GTCACCCACATCTACACAGCACAGGATGTGAAGGAG...GGAGTTCTCCCTTAGAGACCCAATCCCATCTAGCCACCTCTGGACTAGTACCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000566672.5
3UTR CAA 90 bp TCTGTTCATTGGAACAGACTGGGTGGTAACTGCAGGCCACTGCAGTaGACCTGTTGGCATTCGAGGTCTGACGACCTTCAGGTAAATGCT +
Preference number: 2 (lower is better)
Translates to: SVHWNRLGGNCRPLQ*TCWHSRSDDLQVNA
Trigger: AGCATTTACCTGAAGGTCGTCAGACCTCGAATGCCAACAGGTCAACTGCAGTGGCCTGCAGTTACCACCCAGTCTGTTCCAATGAACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR TCA 90 bp AAGGATGGTGTTGAAGGACCGAGTTTTACTCAGATCCTTCTCAGCCCTGCCTTCGAAGATGCTTTGGGCTaGAAATGGTTGGGAGGAGGG +
Preference number: 2 (lower is better)
Translates to: KDGVEGPSFTQILLSPAFEDALG*KWLGGG
Trigger: CCCTCCTCCCAACCATTTTCAGCCCAAAGCATCTTC...GAAGGCAGGGCTGAGAAGGATCTGAGTAAAACTCGGTCCTTCAACACCATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR GCA 90 bp GATACCTGGTCCCCAGGACAAAGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACGGATCATCTACCAGATaGCAGTGGAACACGTTCAAT +
Preference number: 2 (lower is better)
Translates to: DTWSPGQSVARSVKLCKHGSSTR*QWNTFN
Trigger: ATTGAACGTGTTCCACTGGCATCTGGTAGATGATCC...GTGCTTGCAGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGGACCAGGTATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR-3UTR CCA 90 bp CCTGGAACCTGTCCATTGTTACCCCAGCCCAGGGCCCAGCCAAAGAACTTAACAAATCCTCACCTAAAATaGCTGCGATGCATTACTGCC +
Preference number: 2 (lower is better)
Translates to: PGTCPLLPQPRAQPKNLTNPHLK*LRCITA
Trigger: GGCAGTAATGCATCGCAGCCATTTTAGGTGAGGATT...TGTTAAGTTCTTTGGCTGGGCCCTGGGCTGGGGTAACAATGGACAGGTTCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR CCA 90 bp CTTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATAGGCCCCAGGACAAAGTGTaGCCAGGAGTGTCAAACTCT +
Preference number: 2 (lower is better)
Translates to: LQMPGVPLCRNPSSQGHRPQDKV*PGVSNS
Trigger: AGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGG...CCTATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR CAA 90 bp CTGGACTTGGCTAGGCTGGGCTGTGTGAAAATTCCAAGAATTCTGTaGGTAGAAAATGCCCACCCTGTCCTTACAGGAACAGCACAAGGC +
Preference number: 2 (lower is better)
Translates to: LDLARLGCVKIPRIL*VENAHPVLTGTAQG
Trigger: GCCTTGTGCTGTTCCTGTAAGGACAGGGTGGGCATTTTCTACCAACAGAATTCTTGGAATTTTCACACAGCCCAGCCTAGCCAAGTCCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CAA 90 bp GTCATGTGGAGAGTGAATATTGCACACAAATCTTCAGAAGGCTCGTaGCACGGCCTGCTCTCTCTCAGGCCTGAAAGAAGGGTACTAGTC +
Preference number: 2 (lower is better)
Translates to: VMWRVNIAHKSSEGS*HGLLSLRPERRVLV
Trigger: GACTAGTACCCTTCTTTCAGGCCTGAGAGAGAGCAGGCCGTGCAACGAGCCTTCTGAAGATTTGTGTGCAATATTCACTCTCCACATGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR-3UTR TCA 90 bp CCTGGAACCTGTCCATTGTTACCCCAGCCCAGGGCCCAGCCAAAGAACTTAACAGGGCGACAGAGTTTTTaGGACAGTCTCAAAAACAAA +
Preference number: 2 (lower is better)
Translates to: PGTCPLLPQPRAQPKNLTGRQSF*DSLKNK
Trigger: TTTGTTTTTGAGACTGTCTCAAAAACTCTGTCGCCC...TGTTAAGTTCTTTGGCTGGGCCCTGGGCTGGGGTAACAATGGACAGGTTCCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR TCA 90 bp CAGCTGCTTGAAGTCCTCACCGAAGCCTTTCTTCCTCATAAAGTCCTGGATCTCATTTATTGTACGCCATaGCATCCTCGGAGAGCTCCC +
Preference number: 2 (lower is better)
Translates to: QLLEVLTEAFLPHKVLDLIYCTP*HPRRAP
Trigger: GGGAGCTCTCCGAGGATGTCATGGCGTACAATAAAT...GAGATCCAGGACTTTATGAGGAAGAAAGGCTTCGGTGAGGACTTCAAGCAGCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR-3UTR GCA 90 bp GTATCATTTCAGCTTTCCTCACAGTCTCACTGTCCCAGAAGTCTAGGGGCAATGTTACTCTTTATTGAATaGGAGCGCCAGCACCGGCCC +
Preference number: 2 (lower is better)
Translates to: VSFQLSSQSHCPRSLGAMLLFIE*ERQHRP
Trigger: GGGCCGGTGCTGGCGCTCGCATTCAATAAAGAGTAA...CATTGCCCCTAGACTTCTGGGACAGTGAGACTGTGAGGAAAGCTGAAATGATAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR CCA 90 bp GATGGACATGGTGGCACGTGCCTATTAATTCCAGTTACTCAGGAGGCTGATGCAGAATATGGTCAGGAGTaGGAGGGGAGTGACATAGCT +
Preference number: 2 (lower is better)
Translates to: DGHGGTCLLIPVTQEADAEYGQE*EGSDIA
Trigger: AGCTATGTCACTCCCCTCCCACTCCTGACCATATTC...TGCATCAGCCTCCTGAGTAACTGGAATTAATAGGCACGTGCCACCATGTCCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR CCA 90 bp GTCAAACTCTGCAAGCACACGGATACCCCGGAGCCGTGCGTATTCAATGACCTCAGTGAAGCTCTCATATaGGAAGGAAGGATCATCTAC +
Preference number: 2 (lower is better)
Translates to: VKLCKHTDTPEPCVFNDLSEALI*EGRIIY
Trigger: GTAGATGATCCTTCCTTCCCATATGAGAGCTTCACT...GAGGTCATTGAATACGCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
3UTR-3UTR CCA 90 bp GTCATGTGGAGAGTGAATATTGCACACAAATCTTCAGAAGGCTCGTTGCACGGCCCCCAGGACAAAGTGTaGCCAGGAGTGTCAAACTCT +
Preference number: 2 (lower is better)
Translates to: VMWRVNIAHKSSEGSLHGPQDKV*PGVSNS
Trigger: AGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGG...GCCGTGCAACGAGCCTTCTGAAGATTTGTGTGCAATATTCACTCTCCACATGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR-3UTR CCA 90 bp GAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCAGATTCCTCATAAAGTCCTaGATCTCTGGGTTGGACTTC +
Preference number: 2 (lower is better)
Translates to: EILPVRAIGYTVQVPGGRFLIKS*ISGLDF
Trigger: GAAGTCCAACCCAGAGATCCAGGACTTTATGAGGAA...TCTGCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR CAA 90 bp CAGTGCTGGGACCTTAACTTGTGTATCTGGGCTATAGCCCTGGACTaGGCTAGGCTGGGCTGTGTGAAAATTCCAAGAATTCTGTTGGTA +
Preference number: 2 (lower is better)
Translates to: QCWDLNLCIWAIALD*ARLGCVKIPRILLV
Trigger: TACCAACAGAATTCTTGGAATTTTCACACAGCCCAGCCTAGCCAAGTCCAGGGCTATAGCCCAGATACACAAGTTAAGGTCCCAGCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR TCA 90 bp AAGGATGGTGTTGAAGGACCGAGTTTTACTCAGATCCTTCTCAGCCCTGCCTTCACGTTATTTTGGAATTaGCCAGGGCCTCTGAGTCCT +
Preference number: 2 (lower is better)
Translates to: KDGVEGPSFTQILLSPAFTLFWN*PGPLSP
Trigger: AGGACTCAGAGGCCCTGGTCAATTCCAAAATAACGT...GAAGGCAGGGCTGAGAAGGATCTGAGTAAAACTCGGTCCTTCAACACCATCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR GCA 90 bp ACCTACATCCTTTCTTTCACCCTTTCCCAGTATCATTTCAGCTTTCCTCACAGTTGCAGGGTCCTTGTCTaGGGACCACCCCTCCTACAA +
Preference number: 2 (lower is better)
Translates to: TYILSFTLSQYHFSFPHSCRVLV*GPPLLQ
Trigger: TTGTAGGAGGGGTGGTCCGCAGACAAGGACCCTGCA...ACTGTGAGGAAAGCTGAAATGATACTGGGAAAGGGTGAAAGAAAGGATGTAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR CCA 90 bp GTATCATTTCAGCTTTCCTCACAGTCTCACTGTCCCAGAAGTCTAGGGGCAATGATTAGGGCAGGTGTCTaGAATATGGTCAGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: VSFQLSSQSHCPRSLGAMIRAGV*NMVRSG
Trigger: CCCACTCCTGACCATATTCCAGACACCTGCCCTAAT...CATTGCCCCTAGACTTCTGGGACAGTGAGACTGTGAGGAAAGCTGAAATGATAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR CCA 90 bp GTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCAGTGAAGCTCTCATATaGGAAGGAAGGATCATCTAC +
Preference number: 2 (lower is better)
Translates to: VEILPVRAIGYTVQVPGGSEALI*EGRIIY
Trigger: GTAGATGATCCTTCCTTCCCATATGAGAGCTTCACT...GCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR-3UTR CCA 90 bp CTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCAGAGAGAAGTCTACCAGATGCCAGTaGAACACGTTCAATTTATTG +
Preference number: 2 (lower is better)
Translates to: LPVRAIGYTVQVPGGREKSTRCQ*NTFNLL
Trigger: CAATAAATTGAACGTGTTCCACTGGCATCTGGTAGA...CTTCTCTCTGCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR CAA 90 bp ATGGTTGGGAGGAGGGGGATGGAAGTCGCCTACGTTATTTTGGAATaGACCAGGGCCTCTGAGTCCTTCAAATTCAACAATTTACCACAG +
Preference number: 2 (lower is better)
Translates to: MVGRRGMEVAYVILE*TRASESFKFNNLPQ
Trigger: CTGTGGTAAATTGTTGAATTTGAAGGACTCAGAGGCCCTGGTCAATTCCAAAATAACGTAGGCGACTTCCATCCCCCTCCTCCCAACCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR TCA 90 bp TCTCATGAGCTCTGGAAAAGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACGCCGTGCGTATTCAATaGCCTCCTTCACATCCTGTG +
Preference number: 2 (lower is better)
Translates to: SHELWKSEALIWEGRIIYAVRIQ*PPSHPV
Trigger: CACAGGATGTGAAGGAGGTCATTGAATACGCACGGC...GTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTTCCAGAGCTCATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
3UTR-3UTR TCA 90 bp AAAAGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGATGCCAGTGGAAGCCGTGCGTATTCAATaGCCTCCTTCACATCCTGTG +
Preference number: 2 (lower is better)
Translates to: KSEALIWEGRIIYQMPVEAVRIQ*PPSHPV
Trigger: CACAGGATGTGAAGGAGGTCATTGAATACGCACGGC...TTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
3UTR-3UTR TCA 90 bp TGGGTTGGACTTCCAGCAGGTGAAATCAACCTCATCTCCTCCAAGATGAAGATATGGACTTCCAGCAGGTaGAATCAACCTCATCTCCTC +
Preference number: 2 (lower is better)
Translates to: WVGLPAGEINLISSKMKIWTSSR*NQPHLL
Trigger: GAGGAGATGAGGTTGATTTCACCTGCTGGAAGTCCA...TATCTTCATCTTGGAGGAGATGAGGTTGATTTCACCTGCTGGAAGTCCAACCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR-3UTR GCA 90 bp TGGAACACGTTCAATTTATTGTACGCCATGACATCCAGAGTGTCCAGGATGCTAGATACCCCGGAGCCGTaGGTATTCAATGACCTCCTT +
Preference number: 2 (lower is better)
Translates to: WNTFNLLYAMTSRVSRMLDTPEP*VFNDLL
Trigger: AAGGAGGTCATTGAATACGCACGGCTCCGGGGTATC...TAGCATCCTGGACACTCTGGATGTCATGGCGTACAATAAATTGAACGTGTTCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR-3UTR GCA 90 bp TCTCATGAGCTCTGGAAAAGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACAGGAGTGTCAAACTCTaGAAGCACACGGATACCCCG +
Preference number: 2 (lower is better)
Translates to: SHELWKSEALIWEGRIIYRSVKL*KHTDTP
Trigger: CGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCCT...GTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTTCCAGAGCTCATGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
3UTR-3UTR GCA 90 bp TATGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGATCACCAGAGCCTTCTaGTCAGGGGTACCTTCAAAT +
Preference number: 2 (lower is better)
Translates to: YVEILPVRAIGYTVQVPGITRAF*SGVPSN
Trigger: ATTTGAAGGTACCCCTGAGCAGAAGGCTCTGGTGAT...CCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTACATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
3UTR-3UTR CCA 90 bp AGAGCCTGGGGACCAGGTTTGTGTTGTCCACATATTCTCCCCACATACAAGCCTCTTCATATAGTTCACTaGAATATCCTCTCGCCACAC +
Preference number: 2 (lower is better)
Translates to: RAWGPGLCCPHILPTYKPLHIVH*NILSPH
Trigger: GTGTGGCGAGAGGATATTCCAGTGAACTATATGAAG...AGGCTTGTATGTGGGGAGAATATGTGGACAACACAAACCTGGTCCCCAGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR-3UTR TCA 90 bp CTTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATAGGACTCATAGGTATTATTaGGACTGGGATTCACTGGTC +
Preference number: 2 (lower is better)
Translates to: LQMPGVPLCRNPSSQGHRTHRYY*DWDSLV
Trigger: GACCAGTGAATCCCAGTCTCAATAATACCTATGAGT...CCTATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR-3UTR TCA 90 bp CATGTTCCACATCCTGAGTCCTCCAATGTATACTGTGTTCAAACAGAATATCCAGACAAGAGGATCGCTTaGAGCCAGGGGTTCAAGACC +
Preference number: 2 (lower is better)
Translates to: HVPHPESSNVYCVQTEYPDKRIA*SQGFKT
Trigger: GGTCTTGAACCCCTGGCTTCAAGCGATCCTCTTGTC...TGGATATTCTGTTTGAACACAGTATACATTGGAGGACTCAGGATGTGGAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567213.2
3UTR-3UTR CCA 90 bp AAGCGGGGAAAGTCCTCAATCTCAGTCTTGTTGATAAAGAACTCGGAGAGCTCCAGTGAAGCTCTCATATaGGAAGGAAGGATCATCTAC +
Preference number: 2 (lower is better)
Translates to: KRGKSSISVLLIKNSESSSEALI*EGRIIY
Trigger: GTAGATGATCCTTCCTTCCCATATGAGAGCTTCACT...GGAGCTCTCCGAGTTCTTTATCAACAAGACTGAGATTGAGGACTTTCCCCGCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568260.1
3UTR-3UTR CCA 90 bp ATTGTACGCCATGACATCCAGAGTGTCCAGGATGCTAGAGAGTGGCAGGTAATGCTTTCTCATGAGCTCTaGAAAAGTGAAGCTCTCATA +
Preference number: 2 (lower is better)
Translates to: IVRHDIQSVQDAREWQVMLSHEL*KSEALI
Trigger: TATGAGAGCTTCACTTTTCCAGAGCTCATGAGAAAG...CATTACCTGCCACTCTCTAGCATCCTGGACACTCTGGATGTCATGGCGTACAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567411.5
ENST00000568260.1
3UTR-3UTR CCA 90 bp AGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGATGCCAGTGGAACACGAGAGGAGTAAACACTaGTCATCATTTATGGTCAGG +
Preference number: 2 (lower is better)
Translates to: SEALIWEGRIIYQMPVEHERSKH*SSFMVR
Trigger: CCTGACCATAAATGATGACCAGTGTTTACTCCTCTC...GTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000568260.1
3UTR-3UTR CCA 90 bp AGAGCCTGGGGACCAGGTTTGTGTTGTCCACATATTCTCCCCACATACAAGCCTACTGGTCATCATTTATaGTCAGGGTATAATTCTCCA +
Preference number: 2 (lower is better)
Translates to: RAWGPGLCCPHILPTYKPTGHHL*SGYNSP
Trigger: TGGAGAATTATACCCTGACCATAAATGATGACCAGT...AGGCTTGTATGTGGGGAGAATATGTGGACAACACAAACCTGGTCCCCAGGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR-3UTR GCA 90 bp TCTACCAGATGCCAGTGGAACACGTTCAATTTATTGTACGCCATGACATCCAGAGGATCATCTACCAGATaGCAGTGGAACACGTTCAAT +
Preference number: 2 (lower is better)
Translates to: STRCQWNTFNLLYAMTSRGSSTR*QWNTFN
Trigger: ATTGAACGTGTTCCACTGGCATCTGGTAGATGATCC...TCTGGATGTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000567411.5
ENST00000568260.1
3UTR-3UTR GCA 90 bp AGGATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATTGTACGCCATGACTCTTTGTATTCCCAGTaGCTGACACACAGCAGTCAT +
Preference number: 2 (lower is better)
Translates to: RIIYQMPVEHVQFIVRHDSLYSQ*LTHSSH
Trigger: ATGACTGCTGTGTGTCAGGCACTGGGAATACAAAGA...GTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR-3UTR CCA 90 bp ACCTACATCCTTTCTTTCACCCTTTCCCAGTATCATTTCAGCTTTCCTCACAGTTGCTCTTATGATCAGTaGACCAAAGGAGCAACGGTG +
Preference number: 2 (lower is better)
Translates to: TYILSFTLSQYHFSFPHSCSYDQ*TKGATV
Trigger: CACCGTTGCTCCTTTGGTCCACTGATCATAAGAGCA...ACTGTGAGGAAAGCTGAAATGATACTGGGAAAGGGTGAAAGAAAGGATGTAGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CAA 90 bp ACCAGGCCCAGGCTACCCACATACACCTTGATCAAGTTTAGCTTCTaGGACTCAGTACTATACAGGGATACTAGAAAAGTATCATGCTTT +
Preference number: 2 (lower is better)
Translates to: TRPRLPTYTLIKFSF*DSVLYRDTRKVSCF
Trigger: AAAGCATGATACTTTTCTAGTATCCCTGTATAGTACTGAGTCCAAGAAGCTAAACTTGATCAAGGTGTATGTGGGTAGCCTGGGCCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567213.2
3UTR-3UTR TCA 90 bp ACCTACATCCTTTCTTTCACCCTTTCCCAGTATCATTTCAGCTTTCCTCACAGTATTGACCAGGGCCTCTaGGTCCTTCAAATTCAACAA +
Preference number: 2 (lower is better)
Translates to: TYILSFTLSQYHFSFPHSIDQGL*VLQIQQ
Trigger: TTGTTGAATTTGAAGGACTCAGAGGCCCTGGTCAAT...ACTGTGAGGAAAGCTGAAATGATACTGGGAAAGGGTGAAAGAAAGGATGTAGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR CCA 90 bp GAGCTCTGGAAAAGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGATGCTTTCTCATGAGCTCTaGAAAAGTGAAGCTCTCATA +
Preference number: 2 (lower is better)
Translates to: ELWKSEALIWEGRIIYQMLSHEL*KSEALI
Trigger: TATGAGAGCTTCACTTTTCCAGAGCTCATGAGAAAG...CATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTTCCAGAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
ENST00000568260.1
3UTR-3UTR CCA 90 bp GGATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATTGTACGCCATGACAGAGAGGAGTAAACACTaGTCATCATTTATGGTCAGG +
Preference number: 2 (lower is better)
Translates to: GSSTRCQWNTFNLLYAMTERSKH*SSFMVR
Trigger: CCTGACCATAAATGATGACCAGTGTTTACTCCTCTC...TGTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000568260.1
3UTR-3UTR CCA 90 bp CATATGGGAAGGAAGGATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATCTTTCTCATGAGCTCTaGAAAAGTGAAGCTCTCATA +
Preference number: 2 (lower is better)
Translates to: HMGRKDHLPDASGTRSIYLSHEL*KSEALI
Trigger: TATGAGAGCTTCACTTTTCCAGAGCTCATGAGAAAG...ATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000567411.5
ENST00000568260.1
3UTR-3UTR TCA 90 bp AAAAACATTCATAACTATTTTCTTGTTATCCTCGGAAATGTCTGGAAGGCAGGCTCATGTTCCACATCCTaGGTCCTCCAATGTATACTG +
Preference number: 2 (lower is better)
Translates to: KNIHNYFLVILGNVWKAGSCSTS*VLQCIL
Trigger: CAGTATACATTGGAGGACTCAGGATGTGGAACATGA...GCCTGCCTTCCAGACATTTCCGAGGATAACAAGAAAATAGTTATGAATGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567213.2
3UTR-3UTR CCA 90 bp CATGTTCCACATCCTGAGTCCTCCAATGTATACTGTGTTCAAACAGAATATCCAGCTTTAGGTAATAAATaGTGGCTCACACCTGTAATC +
Preference number: 2 (lower is better)
Translates to: HVPHPESSNVYCVQTEYPALGNK*WLTPVI
Trigger: GATTACAGGTGTGAGCCACCATTTATTACCTAAAGC...TGGATATTCTGTTTGAACACAGTATACATTGGAGGACTCAGGATGTGGAACATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567213.2
3UTR-3UTR TCA 90 bp AAAAACATTCATAACTATTTTCTTGTTATCCTCGGAAATGTCTGGAAGGCAGGCTTCTCAGCTGACTCCTaGATGAATCATGTTCCACAT +
Preference number: 2 (lower is better)
Translates to: KNIHNYFLVILGNVWKAGFSADS*MNHVPH
Trigger: ATGTGGAACATGATTCATTCAGGAGTCAGCTGAGAA...GCCTGCCTTCCAGACATTTCCGAGGATAACAAGAAAATAGTTATGAATGTTTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567213.2
3UTR-3UTR TCA 90 bp AATATCCAAAGCAGGGGAACACCTACAGCTCACAGAAATAAAACTCAAATTTTTTACCCACATACACCTTaGTCAAGTTTAGCTTCTTGG +
Preference number: 2 (lower is better)
Translates to: NIQSRGTPTAHRNKTQIFYPHTP*SSLASW
Trigger: CCAAGAAGCTAAACTTGATCAAGGTGTATGTGGGTA...AAAAATTTGAGTTTTATTTCTGTGAGCTGTAGGTGTTCCCCTGCTTTGGATATT
38% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000567213.2
3UTR-3UTR CCA 90 bp AAAAACATTCATAACTATTTTCTTGTTATCCTCGGAAATGTCTGGAAGGCAGGCTTAGGTAATAAATGGTaGCTCACACCTGTAATCTCA +
Preference number: 2 (lower is better)
Translates to: KNIHNYFLVILGNVWKAGLGNKW*LTPVIS
Trigger: TGAGATTACAGGTGTGAGCCACCATTTATTACCTAA...GCCTGCCTTCCAGACATTTCCGAGGATAACAAGAAAATAGTTATGAATGTTTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567213.2
3UTR-3UTR CAA 90 bp ACCCCCTGGTGGTGCACAGCACACAAGATGGCCTGTGTTCCGCTCAGGGGTGGGACCTGTGCAGGGTCCTaGTCTGCGGACCACCCCTCC +
Preference number: 3 (lower is better)
Translates to: TPWWCTAHKMACVPLRGGTCAGS*SADHPS
Trigger: GGAGGGGTGGTCCGCAGACAAGGACCCTGCACAGGT...CCCACCCCTGAGCGGAACACAGGCCATCTTGTGTGCTGTGCACCACCAGGGGGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR TCA 72 bp GCCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTaGAACCAGGAGGGGGCAGTCTGGGTCCACGACGAG +
Preference number: 3 (lower is better)
Translates to: APASGLQYHFCI*NQEGAVWVHDE
Trigger: CTCGTCGTGGACCCAGACTGCCCCCTCCTGGTTTCAGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR GCA 72 bp TCCTCGGTGCCTGGGGCTCAGGTCTGTTCAAACTCCTaGTCACAGAAGCCTACATTGAGGGGTTGGGCCTGG +
Preference number: 3 (lower is better)
Translates to: SSVPGAQVCSNS*SQKPTLRGWAW
Trigger: CCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGAGTTTGAACAGACCTGAGCCCCAGGCACCGAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR GCA 72 bp CCACTACCATTCACCTACAGCCAGCACCCTCCTCGGTaGCTGGGGCTCAGGTCTGTTCAAACTCCTGCTCAC +
Preference number: 3 (lower is better)
Translates to: PLPFTYSQHPPR*LGLRSVQTPAH
Trigger: GTGAGCAGGAGTTTGAACAGACCTGAGCCCCAGGCACCGAGGAGGGTGCTGGCTGTAGGTGAATGGTAGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR CCA 72 bp GGTCCTTGTCTGCGGACCACCCCTCCTACAAGCTTCTaGGTAATAGAGGTAAGGGGGCTCCTGTGGTGGGTG +
Preference number: 3 (lower is better)
Translates to: GPCLRTTPPTSF*VIEVRGLLWWV
Trigger: CACCCACCACAGGAGCCCCCTTACCTCTATTACCCAGAAGCTTGTAGGAGGGGTGGTCCGCAGACAAGGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR TCA 72 bp CCAGCCCTCAACTTAAAAGACCTCAGGGGCAGACACTaGCTCCAGCCTGGCTGTGCCCTTACCCTAACGCCA +
Preference number: 3 (lower is better)
Translates to: PALNLKDLRGRH*LQPGCALTLTP
Trigger: TGGCGTTAGGGTAAGGGCACAGCCAGGCTGGAGTCAGTGTCTGCCCCTGAGGTCTTTTAAGTTGAGGGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CCA 72 bp GGTGGGTGCCAGTGCTGGGACCTTAACTTGTGTATCTaGGCTATAGCCCTGGACTTGGCTAGGCTGGGCTGT +
Preference number: 3 (lower is better)
Translates to: GGCQCWDLNLCI*AIALDLARLGC
Trigger: ACAGCCCAGCCTAGCCAAGTCCAGGGCTATAGCCCAGATACACAAGTTAAGGTCCCAGCACTGGCACCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR CAA 90 bp CCACCAATCACCAGAGCCTTCTGCTCAGGGGTACCTTCAAATGCCAGGGGTTCCAAGGACTCCAGCTGCTaGAAGTCCTCACCGAAGCCT +
Preference number: 3 (lower is better)
Translates to: PPITRAFCSGVPSNARGSKDSSC*KSSPKP
Trigger: AGGCTTCGGTGAGGACTTCAAGCAGCTGGAGTCCTT...GGAACCCCTGGCATTTGAAGGTACCCCTGAGCAGAAGGCTCTGGTGATTGGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR TCA 72 bp AGAAGGCTCGTTGCACGGCCTGCTCTCTCTCAGGCCTaGAAGAAGGGTACTAGTCCAGAGGTGGCTAGATGG +
Preference number: 3 (lower is better)
Translates to: RRLVARPALSQA*KKGTSPEVARW
Trigger: CCATCTAGCCACCTCTGGACTAGTACCCTTCTTTCAGGCCTGAGAGAGAGCAGGCCGTGCAACGAGCCTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR CCA 72 bp TCAAACTCCTGCTCACAGAAGCCTACATTGAGGGGTTaGGCCTGGACACCTCGCCTCAGCAATTCACAGCGG +
Preference number: 3 (lower is better)
Translates to: SNSCSQKPTLRG*AWTPRLSNSQR
Trigger: CCGCTGTGAATTGCTGAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGAGTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR CCA 72 bp TACCATTCACCTACAGCCAGCACCCTCCTCGGTGCCTaGGGCTCAGGTCTGTTCAAACTCCTGCTCACAGAA +
Preference number: 3 (lower is better)
Translates to: YHSPTASTLLGA*GSGLFKLLLTE
Trigger: TTCTGTGAGCAGGAGTTTGAACAGACCTGAGCCCCAGGCACCGAGGAGGGTGCTGGCTGTAGGTGAATGGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR-3UTR CAA 90 bp TGGCACCTGTGCTCCCACATCCTGATATCCTACCCCTACGGCAATCCTTTGAGATGCAGGCCACTGCAGTaGACCTGTTGGCATTCGAGG +
Preference number: 3 (lower is better)
Translates to: WHLCSHILISYPYGNPLRCRPLQ*TCWHSR
Trigger: CCTCGAATGCCAACAGGTCAACTGCAGTGGCCTGCA...TCTCAAAGGATTGCCGTAGGGGTAGGATATCAGGATGTGGGAGCACAGGTGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR GCA 72 bp CACGACGAGACATTTCCTTCTAGAGAAAATCACACCTaGAAAGACCCTCTCCAGAGCCACCGCCCACCTCCG +
Preference number: 3 (lower is better)
Translates to: HDETFPSRENHT*KDPLQSHRPPP
Trigger: CGGAGGTGGGCGGTGGCTCTGGAGAGGGTCTTTGCAGGTGTGATTTTCTCTAGAAGGAAATGTCTCGTCGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CCA 72 bp TCTAGGGGCAATGACTCTCCATCACTAGTGCTGTGGTaGCACCTGTGCTCCCACATCCTGATATCCTACCCC +
Preference number: 3 (lower is better)
Translates to: SRGNDSPSLVLW*HLCSHILISYP
Trigger: GGGGTAGGATATCAGGATGTGGGAGCACAGGTGCCACCACAGCACTAGTGATGGAGAGTCATTGCCCCTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR TCA 72 bp AGGTCTGTTCAAACTCCTGCTCACAGAAGCCTACATTaGGGGGTTGGGCCTGGACACCTCGCCTCAGCAATT +
Preference number: 3 (lower is better)
Translates to: RSVQTPAHRSLH*GVGPGHLASAI
Trigger: AATTGCTGAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGAGTTTGAACAGACCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR GCA 72 bp GAGCCGTGCGTATTCAATGACCTCCTTCACATCCTGTaGTGTGTAGATGTGGGTGACAGGGTTGTAGGACCC +
Preference number: 3 (lower is better)
Translates to: EPCVFNDLLHIL*CVDVGDRVVGP
Trigger: GGGTCCTACAACCCTGTCACCCACATCTACACAGCACAGGATGTGAAGGAGGTCATTGAATACGCACGGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
3UTR GCA 72 bp GTCAAACTCTGCAAGCACACGGATACCCCGGAGCCGTaGGTATTCAATGACCTCCTTCACATCCTGTGCTGT +
Preference number: 3 (lower is better)
Translates to: VKLCKHTDTPEP*VFNDLLHILCC
Trigger: ACAGCACAGGATGTGAAGGAGGTCATTGAATACGCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
3UTR CCA 72 bp CTGGGTGGTAACTGCAGGCCACTGCAGTTGACCTGTTaGCATTCGAGGTCTGACGACCTTCAGGTAAATGCT +
Preference number: 3 (lower is better)
Translates to: LGGNCRPLQLTC*HSRSDDLQVNA
Trigger: AGCATTTACCTGAAGGTCGTCAGACCTCGAATGCCAACAGGTCAACTGCAGTGGCCTGCAGTTACCACCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CCA 72 bp AAGAAGGGTACTAGTCCAGAGGTGGCTAGATGGGATTaGGTCTCTAAGGGAGAACTCCTGCTCTCAGGCCCA +
Preference number: 3 (lower is better)
Translates to: KKGTSPEVARWD*VSKGELLLSGP
Trigger: TGGGCCTGAGAGCAGGAGTTCTCCCTTAGAGACCCAATCCCATCTAGCCACCTCTGGACTAGTACCCTTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000566672.5
3UTR TCA 72 bp TCGAAGGAACATGACCCAGGGGCTGAAGGATGGTGTTaGAGGACCGAGTTTTACTCAGATCCTTCTCAGCCC +
Preference number: 3 (lower is better)
Translates to: SKEHDPGAEGWC*RTEFYSDPSQP
Trigger: GGGCTGAGAAGGATCTGAGTAAAACTCGGTCCTTCAACACCATCCTTCAGCCCCTGGGTCATGTTCCTTCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR TCA 72 bp CCGCTCAGGGGTGGGACTTTCAATTTACAGCCTAGGTaGAGGGAGATGAGTTGGGGCAACAGCGATTCTGTT +
Preference number: 3 (lower is better)
Translates to: PLRGGTFNLQPR*REMSWGNSDSV
Trigger: AACAGAATCGCTGTTGCCCCAACTCATCTCCCTTCACCTAGGCTGTAAATTGAAAGTCCCACCCCTGAGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR GCA 72 bp AACCGCCAAGGAAATCCTCACCTAAAATGGCTGCGATaGATTACTGCCCCCGCCTCTGGCTTACAGTATCAC +
Preference number: 3 (lower is better)
Translates to: NRQGNPHLKWLR*ITAPASGLQYH
Trigger: GTGATACTGTAAGCCAGAGGCGGGGGCAGTAATGCATCGCAGCCATTTTAGGTGAGGATTTCCTTGGCGGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR GCA 72 bp GCTTTATTAGATTCCTCGAAGGGAAGGTACCTGGCATaGAGCCTCAGCTCCTACCAAGGAGAGGAGAGGTTG +
Preference number: 3 (lower is better)
Translates to: ALLDSSKGRYLA*SLSSYQGEERL
Trigger: CAACCTCTCCTCTCCTTGGTAGGAGCTGAGGCTGCATGCCAGGTACCTTCCCTTCGAGGAATCTAATAAAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR GCA 72 bp AATGACTCTCCATCACTAGTGCTGTGGTGGCACCTGTaGTCCCACATCCTGATATCCTACCCCTACGGCAAT +
Preference number: 3 (lower is better)
Translates to: NDSPSLVLWWHL*SHILISYPYGN
Trigger: ATTGCCGTAGGGGTAGGATATCAGGATGTGGGAGCACAGGTGCCACCACAGCACTAGTGATGGAGAGTCATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR GCA 72 bp GTTCATAGGCAAATGTCAGGTCAGATGTCAACTTGTTaGTCCACAGCCTTTCGGCAACAGCCCCTGCTCTGG +
Preference number: 3 (lower is better)
Translates to: VHRQMSGQMSTC*STAFRQQPLLW
Trigger: CCAGAGCAGGGGCTGTTGCCGAAAGGCTGTGGAGCAACAAGTTGACATCTGACCTGACATTTGCCTATGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000567027.5
ENST00000567411.5
3UTR CCA 72 bp CTTAAAAGACCTCAGGGGCAGACACTGACTCCAGCCTaGCTGTGCCCTTACCCTAACGCCATTCACACTTTT +
Preference number: 3 (lower is better)
Translates to: LKRPQGQTLTPA*LCPYPNAIHTF
Trigger: AAAAGTGTGAATGGCGTTAGGGTAAGGGCACAGCCAGGCTGGAGTCAGTGTCTGCCCCTGAGGTCTTTTAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CCA 72 bp AAGTCTAGGGGCAATGACTCTCCATCACTAGTGCTGTaGTGGCACCTGTGCTCCCACATCCTGATATCCTAC +
Preference number: 3 (lower is better)
Translates to: KSRGNDSPSLVL*WHLCSHILISY
Trigger: GTAGGATATCAGGATGTGGGAGCACAGGTGCCACCACAGCACTAGTGATGGAGAGTCATTGCCCCTAGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CCA 72 bp AAGTCCTCACCGAAGCCTTTCTTCCTCATAAAGTCCTaGATCTCTGGGTTGGACTTCCTGGTCCCCAGGACA +
Preference number: 3 (lower is better)
Translates to: KSSPKPFFLIKS*ISGLDFLVPRT
Trigger: TGTCCTGGGGACCAGGAAGTCCAACCCAGAGATCCAGGACTTTATGAGGAAGAAAGGCTTCGGTGAGGACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR CCA 72 bp TCTCTCAGGCCTGAAAGAAGGGTACTAGTCCAGAGGTaGCTAGATGGGATTGGGTCTCTAAGGGAGAACTCC +
Preference number: 3 (lower is better)
Translates to: SLRPERRVLVQR*LDGIGSLRENS
Trigger: GGAGTTCTCCCTTAGAGACCCAATCCCATCTAGCCACCTCTGGACTAGTACCCTTCTTTCAGGCCTGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR-3UTR CAA 90 bp AGGGGTACCTTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGTCCTGGATCTCTGGGTaGGACTTCCAGCAGGTGAAA +
Preference number: 3 (lower is better)
Translates to: RGTFKCQGFHYVEILPVRSWISG*DFQQVK
Trigger: TTTCACCTGCTGGAAGTCCAACCCAGAGATCCAGGA...CCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAAGGTACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR TCA 72 bp CAGGCCACTGCAGTTGACCTGTTGGCATTCGAGGTCTaGCGACCTTCAGGTAAATGCTCTTATGATCAGTGG +
Preference number: 3 (lower is better)
Translates to: QATAVDLLAFEV*RPSGKCSYDQW
Trigger: CCACTGATCATAAGAGCATTTACCTGAAGGTCGTCAGACCTCGAATGCCAACAGGTCAACTGCAGTGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CCA 72 bp CCTAAAATGGCTGCGATGCATTACTGCCCCCGCCTCTaGCTTACAGTATCACTTCTGCATCTGAAACCAGGA +
Preference number: 3 (lower is better)
Translates to: PKMAAMHYCPRL*LTVSLLHLKPG
Trigger: TCCTGGTTTCAGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGGCAGTAATGCATCGCAGCCATTTTAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR TCA 72 bp CTGGACACCTCGCCTCAGCAATTCACAGCGGAAGTGTaGCAAACGTTCATAGGCAAATGTCAGGTCAGATGT +
Preference number: 3 (lower is better)
Translates to: LDTSPQQFTAEV*QTFIGKCQVRC
Trigger: ACATCTGACCTGACATTTGCCTATGAACGTTTGTCACACTTCCGCTGTGAATTGCTGAGGCGAGGTGTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR GCA 72 bp AGGAAATCCTCACCTAAAATGGCTGCGATGCATTACTaGCCCCGCCTCTGGCTTACAGTATCACTTCTGCAT +
Preference number: 3 (lower is better)
Translates to: RKSSPKMAAMHY*PRLWLTVSLLH
Trigger: ATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGGCAGTAATGCATCGCAGCCATTTTAGGTGAGGATTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR GCA 72 bp TATTATCAAACACCTCCTGCCACACCACATAGCCCTTaGCATAAGAAGAGACGATGTCCAGCAGCGTCTGGA +
Preference number: 3 (lower is better)
Translates to: YYQTPPATPHSP*HKKRRCPAASG
Trigger: TCCAGACGCTGCTGGACATCGTCTCTTCTTATGGCAAGGGCTATGTGGTGTGGCAGGAGGTGTTTGATAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR CCA 72 bp GGTGACAGGGTTGTAGGACCCCTTTCTCATGAGCTCTaGAAAAGTGAAGCTCTCATATGGGAAGGAAGGATC +
Preference number: 3 (lower is better)
Translates to: GDRVVGPLSHEL*KSEALIWEGRI
Trigger: GATCCTTCCTTCCCATATGAGAGCTTCACTTTTCCAGAGCTCATGAGAAAGGGGTCCTACAACCCTGTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
3UTR TCA 72 bp ACATTCTTCTCCAGTGTATGCCGTTTCCCTAGGTTGTaGGTTCCTCAACAGGAGGGACCAATCTCAGTGTCT +
Preference number: 3 (lower is better)
Translates to: TFFSSVCRFPRL*VPQQEGPISVS
Trigger: AGACACTGAGATTGGTCCCTCCTGTTGAGGAACTCACAACCTAGGGAAACGGCATACACTGGAGAAGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR CCA 72 bp TTAACAAATAACCGCCAAGGAAATCCTCACCTAAAATaGCTGCGATGCATTACTGCCCCCGCCTCTGGCTTA +
Preference number: 3 (lower is better)
Translates to: LTNNRQGNPHLK*LRCITAPASGL
Trigger: TAAGCCAGAGGCGGGGGCAGTAATGCATCGCAGCCATTTTAGGTGAGGATTTCCTTGGCGGTTATTTGTTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CCA 72 bp CATGAACTCATAGGTATTATTGAGACTGGGATTCACTaGTCCAAAGGTGCCAGAGGGCTCAGACCCAGAGTA +
Preference number: 3 (lower is better)
Translates to: HELIGIIETGIH*SKGARGLRPRV
Trigger: TACTCTGGGTCTGAGCCCTCTGGCACCTTTGGACCAGTGAATCCCAGTCTCAATAATACCTATGAGTTCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR CCA 72 bp AAGTCCTCACCGAAGCCTTTCTTCCTCATAAAGTCCTaGATCTCTGGGTTGGACTTCCAGCAGGTGAAATCA +
Preference number: 3 (lower is better)
Translates to: KSSPKPFFLIKS*ISGLDFQQVKS
Trigger: TGATTTCACCTGCTGGAAGTCCAACCCAGAGATCCAGGACTTTATGAGGAAGAAAGGCTTCGGTGAGGACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR-3UTR CAA 90 bp AGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGATGCCAGTGGAACACCCAATCTCAGTGTCTTaGTATTCCCAGTGCCTGACA +
Preference number: 3 (lower is better)
Translates to: SEALIWEGRIIYQMPVEHPISVS*YSQCLT
Trigger: TGTCAGGCACTGGGAATACAAAGACACTGAGATTGG...GTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR-3UTR CAA 90 bp ACCTGTCCATTGTTACCCCAGCCCAGGGCCCAGCCAAAGAACTTAACAAATAACTGGGCGACAGAGTTTTaGAGACAGTCTCAAAAACAA +
Preference number: 3 (lower is better)
Translates to: TCPLLPQPRAQPKNLTNNWATEF*RQSQKQ
Trigger: TTGTTTTTGAGACTGTCTCAAAAACTCTGTCGCCCA...GTTATTTGTTAAGTTCTTTGGCTGGGCCCTGGGCTGGGGTAACAATGGACAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR-3UTR CAA 90 bp ATCCAGAGTGTCCAGGATGCTAGAGAGTGGCAGGTAATGGCGAGATGTATCCAATCCTCAATCTCAGTCTaGTTGATAAAGAACTCGGAG +
Preference number: 3 (lower is better)
Translates to: IQSVQDAREWQVMARCIQSSISV*LIKNSE
Trigger: CTCCGAGTTCTTTATCAACAAGACTGAGATTGAGGA...TTGGATACATCTCGCCATTACCTGCCACTCTCTAGCATCCTGGACACTCTGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568260.1
3UTR TCA 72 bp AGTCGCCTACGTTATTTTGGAATTGACCAGGGCCTCTaGGTCCTTCAAATTCAACAATTTACCACAGGCCCG +
Preference number: 3 (lower is better)
Translates to: SRLRYFGIDQGL*VLQIQQFTTGP
Trigger: CGGGCCTGTGGTAAATTGTTGAATTTGAAGGACTCAGAGGCCCTGGTCAATTCCAAAATAACGTAGGCGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR TCA 72 bp GGAGGGGGATGGAAGTCGCCTACGTTATTTTGGAATTaGCCAGGGCCTCTGAGTCCTTCAAATTCAACAATT +
Preference number: 3 (lower is better)
Translates to: GGGWKSPTLFWN*PGPLSPSNSTI
Trigger: AATTGTTGAATTTGAAGGACTCAGAGGCCCTGGTCAATTCCAAAATAACGTAGGCGACTTCCATCCCCCTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR TCA 72 bp GTGGGACTTTCAATTTACAGCCTAGGTGAAGGGAGATaGGTTGGGGCAACAGCGATTCTGTTCATTGGAACA +
Preference number: 3 (lower is better)
Translates to: VGLSIYSLGEGR*VGATAILFIGT
Trigger: TGTTCCAATGAACAGAATCGCTGTTGCCCCAACTCATCTCCCTTCACCTAGGCTGTAAATTGAAAGTCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR TCA 72 bp CAGCTGGAGGGATATAGACGGAAGTCATGTGGAGAGTaGATATTGCACACAAATCTTCAGAAGGCTCGTTGC +
Preference number: 3 (lower is better)
Translates to: QLEGYRRKSCGE*ILHTNLQKARC
Trigger: GCAACGAGCCTTCTGAAGATTTGTGTGCAATATTCACTCTCCACATGACTTCCGTCTATATCCCTCCAGCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
3UTR CCA 72 bp CTTGGTGACCAGTTCCAGCTCCTTCATATAGTTCACTaGAATATCCTCTCGCCACACCTGTATGATTGTGTC +
Preference number: 3 (lower is better)
Translates to: LGDQFQLLHIVH*NILSPHLYDCV
Trigger: GACACAATCATACAGGTGTGGCGAGAGGATATTCCAGTGAACTATATGAAGGAGCTGGAACTGGTCACCAAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
3UTR TCA 72 bp ACAGCTTGCTTACCTCAGCAATTCACAGCGGAAGTGTaGCAAACGTTCATAGGCAAATGTCAGGTCAGATGT +
Preference number: 3 (lower is better)
Translates to: TACLPQQFTAEV*QTFIGKCQVRC
Trigger: ACATCTGACCTGACATTTGCCTATGAACGTTTGTCACACTTCCGCTGTGAATTGCTGAGGTAAGCAAGCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567027.5
3UTR CCA 72 bp CTTTCTCATGAGCTCTGGAAAAGTGAAGCTCTCATATaGGAAGGAAGGATCATCTACCAGATGCCAGTGGAA +
Preference number: 3 (lower is better)
Translates to: LSHELWKSEALI*EGRIIYQMPVE
Trigger: TTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTTCCAGAGCTCATGAGAAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
ENST00000568260.1
3UTR GCA 72 bp AAGCTCTCATATGGGAAGGAAGGATCATCTACCAGATaGCAGTGGAACACGTTCAATTTATTGTACGCCATG +
Preference number: 3 (lower is better)
Translates to: KLSYGKEGSSTR*QWNTFNLLYAM
Trigger: CATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000567411.5
ENST00000568260.1
3UTR CCA 72 bp TCATATGGGAAGGAAGGATCATCTACCAGATGCCAGTaGAACACGTTCAATTTATTGTACGCCATGACATCC +
Preference number: 3 (lower is better)
Translates to: SYGKEGSSTRCQ*NTFNLLYAMTS
Trigger: GGATGTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000567411.5
ENST00000568260.1
3UTR-3UTR CAA 90 bp GGAAGGATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATTGTACGCCATTCAATCTCAGTCTTGTaGATAAAGAACTCGGAGAGC +
Preference number: 3 (lower is better)
Translates to: GRIIYQMPVEHVQFIVRHSISVL*IKNSES
Trigger: GCTCTCCGAGTTCTTTATCAACAAGACTGAGATTGA...ATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568260.1
3UTR TCA 72 bp ATGTTTATTATAGAAAAATGCCACATTACTCTTTATTaGATGCGAGCGCCAGCACCGGCCCCTTTCTCTCCA +
Preference number: 3 (lower is better)
Translates to: MFIIEKCHITLY*MRAPAPAPFSP
Trigger: TGGAGAGAAAGGGGCCGGTGCTGGCGCTCGCATTCAATAAAGAGTAATGTGGCATTTTTCTATAATAAACAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR TCA 72 bp TTTCATAAACCAGGCCCAGGCTACCCACATACACCTTaGTCAAGTTTAGCTTCTTGGACTCAGTACTATACA +
Preference number: 3 (lower is better)
Translates to: FHKPGPGYPHTP*SSLASWTQYYT
Trigger: TGTATAGTACTGAGTCCAAGAAGCTAAACTTGATCAAGGTGTATGTGGGTAGCCTGGGCCTGGTTTATGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567213.2
3UTR TCA 72 bp GTTAAGGGGTTAATAAACACTTTCTCAGCTGACTCCTaGATGAATCATGTTCCACATCCTGAGTCCTCCAAT +
Preference number: 3 (lower is better)
Translates to: VKGLINTFSADS*MNHVPHPESSN
Trigger: ATTGGAGGACTCAGGATGTGGAACATGATTCATTCAGGAGTCAGCTGAGAAAGTGTTTATTAACCCCTTAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR GCA 90 bp GGGGCAGAGAGAAGGGCCCGGAAGCCGGCCTTGGTGACCAGTTCCAGCTCCTTCGGCCGTCGCCCGTCCTaGGAACGCTGCCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GAERRARKPALVTSSSSFGRRPS*ERCRQQ
Trigger: CTGCTGGCGGCAGCGTTCGCAGGACGGGCGACGGCC...GAAGGAGCTGGAACTGGTCACCAAGGCCGGCTTCCGGGCCCTTCTCTCTGCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR GCA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATGGCCGTCGCCCGTCCTaGGAACGCTGCCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHGRRPS*ERCRQQ
Trigger: CTGCTGGCGGCAGCGTTCGCAGGACGGGCGACGGCC...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp GGTCGCACCTGTGCAGGGTCCTTGTCTGCGGACCACCCCTCCTACAAGCTTCTGGGCCGTCGCCCGTCCTaGGAACGCTGCCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GRTCAGSLSADHPSYKLLGRRPS*ERCRQQ
Trigger: CTGCTGGCGGCAGCGTTCGCAGGACGGGCGACGGCC...CAGAAGCTTGTAGGAGGGGTGGTCCGCAGACAAGGACCCTGCACAGGTGCGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp AGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCGGTGCGGCCAACCTGTaGGGTAAGGACGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: RGSVPWPGCSGSLAPLPFGAANL*GKDGAK
Trigger: CTTGGCCCCGTCCTTACCTCACAGGTTGGCCGCACC...GAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566304.5
CDS-3UTR GCA 90 bp GCAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCACCGTCCTGCGAACGCTaGCGCCAGCAGCAGCGAAAA +
Preference number: 4 (lower is better)
Translates to: ARGSVPWPGCSGSLAPLPPSCER*RQQQRK
Trigger: TTTTCGCTGCTGCTGGCGGCAGCGTTCGCAGGACGG...TGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp GCAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCACCCACCCCCTGGTGGTaGACAGCACACAAGATGGCC +
Preference number: 4 (lower is better)
Translates to: ARGSVPWPGCSGSLAPLPPTPWW*TAHKMA
Trigger: GGCCATCTTGTGTGCTGTGCACCACCAGGGGGTGGG...TGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp AGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCCTTGTCATGGCCCGCTaGTCTCCCCTCTCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RGSVPWPGCSGSLAPLPFLVMAR*SPLSEG
Trigger: CCCCTCCGAGAGGGGAGACCAGCGGGCCATGACAAG...GAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000268097.10
ENST00000567411.5
CDS-3UTR CCA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACAGGGGCTCCGTCCCCTaGCCAGGATGCAGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHRGSVP*PGCSGS
Trigger: GCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR TCA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATGAGGTTTGGAAGTTCTaGGGCCAGGGCCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHEVWKF*GQGQRA
Trigger: GGCCCTCTGGCCCTGGCCTCAGAACTTCCAAACCTC...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR TCA 90 bp GCAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCAGGAAGCCGGCCTTGGTaGCCAGTTCCAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ARGSVPWPGCSGSLAPLPGSRPW*PVPAPS
Trigger: TGAAGGAGCTGGAACTGGTCACCAAGGCCGGCTTCC...TGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp CCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCAACTGAGCAGCCGGGCTaGGCGGCCGAGCTGACATCG +
Preference number: 4 (lower is better)
Translates to: PLARMQWKPGSTTIHLQPTEQPG*AAELTS
Trigger: CGATGTCAGCTCGGCCGCGCAGCCCGGCTGCTCAGT...TGGCTGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp AGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCGTCCCCTGGCCAGGATaGAGTGGAAGCCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RGSVPWPGCSGSLAPLPFVPWPG*SGSLAP
Trigger: TGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGAC...GAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp ACCCCCTGGTGGTGCACAGCACACAAGATGGCCTGTGTTCCGCTCAGGGGTGGGGCCTGGAGCTTGTCATaGCCCGCTGGTCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: TPWWCTAHKMACVPLRGGAWSLS*PAGLPS
Trigger: AGAGGGGAGACCAGCGGGCCATGACAAGCTCCAGGC...CCCACCCCTGAGCGGAACACAGGCCATCTTGTGTGCTGTGCACCACCAGGGGGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp GCAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCACCTACATTGAGGGGTTaGGCCTGGACACCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: ARGSVPWPGCSGSLAPLPPTLRG*AWTPRL
Trigger: GAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGG...TGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR TCA 90 bp CACACCTGCAAAGACCCTCTCCAGAGCCACCGCCCACCTCCGCGCAGCCATCCATATGCCGTTTCCCTGTaGGGTAAGGACGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: HTCKDPLQSHRPPPRSHPYAVSL*GKDGAK
Trigger: CTTGGCCCCGTCCTTACCTCACAGGGAAACGGCATA...TGGATGGCTGCGCGGAGGTGGGCGGTGGCTCTGGAGAGGGTCTTTGCAGGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp CCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCACTCAGGGGCAGACACTaGCTCCAGCCTGGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: PLARMQWKPGSTTIHLQPLRGRH*LQPGCA
Trigger: GGCACAGCCAGGCTGGAGTCAGTGTCTGCCCCTGAG...TGGCTGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp GAATGCGAGCGCCAGCACCGGCCCCTTTCTCTCCAAGCACAGGGGCACGCAGGCTGTGCTCCCACATCCTaGTATCCTACCCCTACGGCA +
Preference number: 4 (lower is better)
Translates to: ECERQHRPLSLQAQGHAGCAPTS*YPTPTA
Trigger: TGCCGTAGGGGTAGGATATCAGGATGTGGGAGCACA...GCCTGCGTGCCCCTGTGCTTGGAGAGAAAGGGGCCGGTGCTGGCGCTCGCATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp GCAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATCACTGGTCCAAAGGTaGCAGAGGGCTCAGACCCAG +
Preference number: 4 (lower is better)
Translates to: ARGSVPWPGCSGSLAPLPSLVQR*QRAQTQ
Trigger: CTGGGTCTGAGCCCTCTGGCACCTTTGGACCAGTGA...TGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp CCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCATTCGGCAACAGCCCCTaGTCTGGGCCAGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: PLARMQWKPGSTTIHLQPFGNSP*SGPEPG
Trigger: CCCAGGCTCTGGCCCAGAGCAGGGGCTGTTGCCGAA...TGGCTGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCCTACATTGAGGGGTTaGGCCTGGACACCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHPTLRG*AWTPRL
Trigger: GAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGG...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR TCA 90 bp AGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCGCTGCGCGGCCGAGCTaGCATCGTACTGGAATTGAA +
Preference number: 4 (lower is better)
Translates to: RGSVPWPGCSGSLAPLPFAARPS*HRTGIE
Trigger: TTCAATTCCAGTACGATGTCAGCTCGGCCGCGCAGC...GAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR TCA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACGCTGCGCGGCCGAGCTaGCATCGTACTGGAATTGAA +
Preference number: 4 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHAARPS*HRTGIE
Trigger: TTCAATTCCAGTACGATGTCAGCTCGGCCGCGCAGC...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR TCA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATGCTGCGCGGCCGAGCTaGCATCGTACTGGAATTGAA +
Preference number: 4 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHAARPS*HRTGIE
Trigger: TTCAATTCCAGTACGATGTCAGCTCGGCCGCGCAGC...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR TCA 90 bp ACCCCCTGGTGGTGCACAGCACACAAGATGGCCTGTGTTCCGCTCAGGGGTGGGCACAGAAGCCTACATTaGGGGGTTGGGCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: TPWWCTAHKMACVPLRGGHRSLH*GVGPGH
Trigger: GTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTG...CCCACCCCTGAGCGGAACACAGGCCATCTTGTGTGCTGTGCACCACCAGGGGGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp AGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCCACAGAAGCCTACATTaGGGGGTTGGGCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: RGSVPWPGCSGSLAPLPFHRSLH*GVGPGH
Trigger: GTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTG...GAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp CCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACACAGCACCCTCCTCGGTaGCTGGGGCTCAGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: PSPGQDAVEAWLHYHSPTQHPPR*LGLRSV
Trigger: AACAGACCTGAGCCCCAGGCACCGAGGAGGGTGCTG...TGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATCCAGGAGGTGGAGCTTaGAGTGAGTCGAGATCGTGC +
Preference number: 4 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHPGGGA*SESRSC
Trigger: GCACGATCTCGACTCACTGCAAGCTCCACCTCCTGG...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATGCTGCGATGCATTACTaGCCCCGCCTCTGGCTTACA +
Preference number: 4 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHAAMHY*PRLWLT
Trigger: TGTAAGCCAGAGGCGGGGGCAGTAATGCATCGCAGC...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp GAATGCGAGCGCCAGCACCGGCCCCTTTCTCTCCAAGCACAGGGGCACGCAGGCTGTGGTGGGTGCCAGTaGTGGGACCTTAACTTGTGT +
Preference number: 4 (lower is better)
Translates to: ECERQHRPLSLQAQGHAGCGGCQ*WDLNLC
Trigger: ACACAAGTTAAGGTCCCAGCACTGGCACCCACCACA...GCCTGCGTGCCCCTGTGCTTGGAGAGAAAGGGGCCGGTGCTGGCGCTCGCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp CCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCAGCCTGGAGCTTGTCATaGCCCGCTGGTCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: PLARMQWKPGSTTIHLQPAWSLS*PAGLPS
Trigger: AGAGGGGAGACCAGCGGGCCATGACAAGCTCCAGGC...TGGCTGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp GGGGCAGAGAGAAGGGCCCGGAAGCCGGCCTTGGTGACCAGTTCCAGCTCCTTCGAGACTGGGATTCACTaGTCCAAAGGTGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GAERRARKPALVTSSSSFETGIH*SKGARG
Trigger: CCCTCTGGCACCTTTGGACCAGTGAATCCCAGTCTC...GAAGGAGCTGGAACTGGTCACCAAGGCCGGCTTCCGGGCCCTTCTCTCTGCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CCA 90 bp CCACCCCCTGGTGGTGCACAGCACACAAGATGGCCTGTGTTCCGCTCAGGGGTGTTGAGGGGTTGGGCCTaGACACCTCGCCTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: PPPGGAQHTRWPVFRSGVLRGWA*TPRLSN
Trigger: ATTGCTGAGGCGAGGTGTCCAGGCCCAACCCCTCAA...CACCCCTGAGCGGAACACAGGCCATCTTGTGTGCTGTGCACCACCAGGGGGTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACTTGAGGGGTTGGGCCTaGACACCTCGCCTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHLRGWA*TPRLSN
Trigger: ATTGCTGAGGCGAGGTGTCCAGGCCCAACCCCTCAA...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACACCCTCCTCGGTGCCTaGGGCTCAGGTCTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHTLLGA*GSGLFK
Trigger: TTTGAACAGACCTGAGCCCCAGGCACCGAGGAGGGT...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp GTCTGGAAACTTCCCCACCCCCTGGTGGTGCACAGCACACAAGATGGCCTGTGTAGGGGCTCCGTCCCCTaGCCAGGATGCAGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: VWKLPHPLVVHSTQDGLCRGSVP*PGCSGS
Trigger: GCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT...ACACAGGCCATCTTGTGTGCTGTGCACCACCAGGGGGTGGGGAAGTTTCCAGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATCGAAGGGAAGGTACCTaGCATGCAGCCTCAGCTCCT +
Preference number: 4 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHRREGT*HAASAP
Trigger: AGGAGCTGAGGCTGCATGCCAGGTACCTTCCCTTCG...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATCCATCACTAGTGCTGTaGTGGCACCTGTGCTCCCAC +
Preference number: 4 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHPSLVL*WHLCSH
Trigger: GTGGGAGCACAGGTGCCACCACAGCACTAGTGATGG...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp CACACCTGCAAAGACCCTCTCCAGAGCCACCGCCCACCTCCGCGCAGCCATCCAGCCGTGCGTATTCAATaGCCTCCTTCACATCCTGTG +
Preference number: 4 (lower is better)
Translates to: HTCKDPLQSHRPPPRSHPAVRIQ*PPSHPV
Trigger: CACAGGATGTGAAGGAGGTCATTGAATACGCACGGC...TGGATGGCTGCGCGGAGGTGGGCGGTGGCTCTGGAGAGGGTCTTTGCAGGTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATAGGACTCCAGCTGCTTaGAGTCCTCACCGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHRTPAA*SPHRSL
Trigger: AAGGCTTCGGTGAGGACTTCAAGCAGCTGGAGTCCT...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR TCA 90 bp GTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCAGAGAGAAGGGCCCGGGAAGCCGGCCTTGGTaGCCAGTTCCAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: VRAIGYTVQVPGGREKGPGSRPW*PVPAPS
Trigger: TGAAGGAGCTGGAACTGGTCACCAAGGCCGGCTTCC...CGGGCCCTTCTCTCTGCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR GCA 90 bp AGAGCCTGGGGACCAGGTTTGTGTTGTCCACATATTCTCCCCACATACAAGCCTGGCCGTCGCCCGTCCTaGGAACGCTGCCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: RAWGPGLCCPHILPTYKPGRRPS*ERCRQQ
Trigger: CTGCTGGCGGCAGCGTTCGCAGGACGGGCGACGGCC...AGGCTTGTATGTGGGGAGAATATGTGGACAACACAAACCTGGTCCCCAGGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR GCA 90 bp TCAAACTCTGCAAGCACACGGATACCCCGGAGCCGTGCGTATTCAATGACCTCCACTGAGCAGCCGGGCTaGGCGGCCGAGCTGACATCG +
Preference number: 4 (lower is better)
Translates to: SNSASTRIPRSRAYSMTSTEQPG*AAELTS
Trigger: CGATGTCAGCTCGGCCGCGCAGCCCGGCTGCTCAGT...GGAGGTCATTGAATACGCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR GCA 90 bp GGGGGCAGAGAGAAGGGCCCGGAAGCCGGCCTTGGTGACCAGTTCCAGCTCCTTAGGAGTGTCAAACTCTaGAAGCACACGGATACCCCG +
Preference number: 4 (lower is better)
Translates to: GGREKGPEAGLGDQFQLLRSVKL*KHTDTP
Trigger: CGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCCT...AAGGAGCTGGAACTGGTCACCAAGGCCGGCTTCCGGGCCCTTCTCTCTGCCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR GCA 90 bp GGTCGCACCTGTGCAGGGTCCTTGTCTGCGGACCACCCCTCCTACAAGCTTCTGTGCAGGGTCCTTGTCTaGGGACCACCCCTCCTACAA +
Preference number: 4 (lower is better)
Translates to: GRTCAGSLSADHPSYKLLCRVLV*GPPLLQ
Trigger: TTGTAGGAGGGGTGGTCCGCAGACAAGGACCCTGCA...CAGAAGCTTGTAGGAGGGGTGGTCCGCAGACAAGGACCCTGCACAGGTGCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp GGGATTCACTGGTCCAAAGGTGCCAGAGGGCTCAGACCCAGAGTAGCAAGGAGTCTTGTCATGGCCCGCTaGTCTCCCCTCTCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GIHWSKGARGLRPRVARSLVMAR*SPLSEG
Trigger: CCCCTCCGAGAGGGGAGACCAGCGGGCCATGACAAG...ACTCCTTGCTACTCTGGGTCTGAGCCCTCTGGCACCTTTGGACCAGTGAATCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp GCAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCACCCCAGGACAAAGTGTaGCCAGGAGTGTCAAACTCT +
Preference number: 4 (lower is better)
Translates to: ARGSVPWPGCSGSLAPLPPQDKV*PGVSNS
Trigger: AGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGG...TGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp ACCCCCTGGTGGTGCACAGCACACAAGATGGCCTGTGTTCCGCTCAGGGGTGGGGAGACTGGGATTCACTaGTCCAAAGGTGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: TPWWCTAHKMACVPLRGGETGIH*SKGARG
Trigger: CCCTCTGGCACCTTTGGACCAGTGAATCCCAGTCTC...CCCACCCCTGAGCGGAACACAGGCCATCTTGTGTGCTGTGCACCACCAGGGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp AGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCGAGACTGGGATTCACTaGTCCAAAGGTGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: RGSVPWPGCSGSLAPLPFETGIH*SKGARG
Trigger: CCCTCTGGCACCTTTGGACCAGTGAATCCCAGTCTC...GAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR TCA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACGCCGTGCGTATTCAATaGCCTCCTTCACATCCTGTG +
Preference number: 4 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHAVRIQ*PPSHPV
Trigger: CACAGGATGTGAAGGAGGTCATTGAATACGCACGGC...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR TCA 90 bp CCTCCTCGGTGCCTGGGGCTCAGGTCTGTTCAAACTCCTGCTCACAGAAGCCTAGGAAGCCGGCCTTGGTaGCCAGTTCCAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PPRCLGLRSVQTPAHRSLGSRPW*PVPAPS
Trigger: TGAAGGAGCTGGAACTGGTCACCAAGGCCGGCTTCC...TAGGCTTCTGTGAGCAGGAGTTTGAACAGACCTGAGCCCCAGGCACCGAGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR TCA 90 bp CCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTGAAACCAGGAGGGGGCAGGGAGAGGCTCTTCTGTaGCCAGGTTGGGTCTGGAGC +
Preference number: 4 (lower is better)
Translates to: PPPLAYSITSASETRRGQGEALL*PGWVWS
Trigger: GCTCCAGACCCAACCTGGTCACAGAAGAGCCTCTCC...CTGCCCCCTCCTGGTTTCAGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp CACACCTGCAAAGACCCTCTCCAGAGCCACCGCCCACCTCCGCGCAGCCATCCATTGGCATTCGAGGTCTaGCGACCTTCAGGTAAATGC +
Preference number: 4 (lower is better)
Translates to: HTCKDPLQSHRPPPRSHPLAFEV*RPSGKC
Trigger: GCATTTACCTGAAGGTCGTCAGACCTCGAATGCCAA...TGGATGGCTGCGCGGAGGTGGGCGGTGGCTCTGGAGAGGGTCTTTGCAGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp CAGCTGCTTGAAGTCCTCACCGAAGCCTTTCTTCCTCATAAAGTCCTGGATCTCGGCCGTCGCCCGTCCTaGGAACGCTGCCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: QLLEVLTEAFLPHKVLDLGRRPS*ERCRQQ
Trigger: CTGCTGGCGGCAGCGTTCGCAGGACGGGCGACGGCC...GAGATCCAGGACTTTATGAGGAAGAAAGGCTTCGGTGAGGACTTCAAGCAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR GCA 90 bp CACACCTGCAAAGACCCTCTCCAGAGCCACCGCCCACCTCCGCGCAGCCATCCACTCCTTCACATCCTGTaGTGTGTAGATGTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: HTCKDPLQSHRPPPRSHPLLHIL*CVDVGD
Trigger: GTCACCCACATCTACACAGCACAGGATGTGAAGGAG...TGGATGGCTGCGCGGAGGTGGGCGGTGGCTCTGGAGAGGGTCTTTGCAGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp AACCGCCAAGGAAATCCTCACCTAAAATGGCTGCGATGCATTACTGCCCCCGCCTTCGGCAACAGCCCCTaGTCTGGGCCAGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: NRQGNPHLKWLRCITAPAFGNSP*SGPEPG
Trigger: CCCAGGCTCTGGCCCAGAGCAGGGGCTGTTGCCGAA...GGCGGGGGCAGTAATGCATCGCAGCCATTTTAGGTGAGGATTTCCTTGGCGGTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp TGCAAGCACACGGATACCCCGGAGCCGTGCGTATTCAATGACCTCCTTCACATCTTCGGCAACAGCCCCTaGTCTGGGCCAGAGCCTGGG +
Preference number: 4 (lower is better)
Translates to: CKHTDTPEPCVFNDLLHIFGNSP*SGPEPG
Trigger: CCCAGGCTCTGGCCCAGAGCAGGGGCTGTTGCCGAA...GATGTGAAGGAGGTCATTGAATACGCACGGCTCCGGGGTATCCGTGTGCTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR GCA 90 bp CACACCTGCAAAGACCCTCTCCAGAGCCACCGCCCACCTCCGCGCAGCCATCCACCGTTAGGCCTGCTTTaGCTCCTTAATAGACTCCTG +
Preference number: 4 (lower is better)
Translates to: HTCKDPLQSHRPPPRSHPPLGLL*LLNRLL
Trigger: CAGGAGTCTATTAAGGAGGCAAAGCAGGCCTAACGG...TGGATGGCTGCGCGGAGGTGGGCGGTGGCTCTGGAGAGGGTCTTTGCAGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp CCACCCCCTGGTGGTGCACAGCACACAAGATGGCCTGTGTTCCGCTCAGGGGTGCCCCAGGACAAAGTGTaGCCAGGAGTGTCAAACTCT +
Preference number: 4 (lower is better)
Translates to: PPPGGAQHTRWPVFRSGVPQDKV*PGVSNS
Trigger: AGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGG...CACCCCTGAGCGGAACACAGGCCATCTTGTGTGCTGTGCACCACCAGGGGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp GCAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCAGAATATGGTCAGGAGTaGGAGGGGAGTGACATAGCT +
Preference number: 4 (lower is better)
Translates to: ARGSVPWPGCSGSLAPLPEYGQE*EGSDIA
Trigger: AGCTATGTCACTCCCCTCCCACTCCTGACCATATTC...TGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACGGTGGGTGCCAGTGCTaGGACCTTAACTTGTGTATC +
Preference number: 4 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHGGCQC*DLNLCI
Trigger: GATACACAAGTTAAGGTCCCAGCACTGGCACCCACC...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp GTCCCCAGGACAAAGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATACGAGGTTTGGAAGTTCTaGGGCCAGGGCCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: VPRTKCGQECQTLQAHGYEVWKF*GQGQRA
Trigger: GGCCCTCTGGCCCTGGCCTCAGAACTTCCAAACCTC...GTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR TCA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATCTCGCCACACCTGTATaGTTGTGTCTGGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHLATPV*LCLAES
Trigger: AGATTCAGCCAGACACAATCATACAGGTGTGGCGAG...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR TCA 90 bp CCACCAATCACCAGAGCCTTCTGCTCAGGGGTACCTTCAAATGCCAGGGGTTCCGGAAGCCGGCCTTGGTaGCCAGTTCCAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: PPITRAFCSGVPSNARGSGSRPW*PVPAPS
Trigger: TGAAGGAGCTGGAACTGGTCACCAAGGCCGGCTTCC...GGAACCCCTGGCATTTGAAGGTACCCCTGAGCAGAAGGCTCTGGTGATTGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR TCA 90 bp CCACCCCCTGGTGGTGCACAGCACACAAGATGGCCTGTGTTCCGCTCAGGGGTGCACATTACTCTTTATTaGATGCGAGCGCCAGCACCG +
Preference number: 4 (lower is better)
Translates to: PPPGGAQHTRWPVFRSGVHITLY*MRAPAP
Trigger: CGGTGCTGGCGCTCGCATTCAATAAAGAGTAATGTG...CACCCCTGAGCGGAACACAGGCCATCTTGTGTGCTGTGCACCACCAGGGGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp GTCTGGAAACTTCCCCACCCCCTGGTGGTGCACAGCACACAAGATGGCCTGTGTAGGCAGAGGCTGCAGTaGGCCAAGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: VWKLPHPLVVHSTQDGLCRQRLQ*AKIVPL
Trigger: CAGTGGCACAATCTTGGCTCACTGCAGCCTCTGCCT...ACACAGGCCATCTTGTGTGCTGTGCACCACCAGGGGGTGGGGAAGTTTCCAGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp GAATGCGAGCGCCAGCACCGGCCCCTTTCTCTCCAAGCACAGGGGCACGCAGGCAGACAAGTGAACATCTaGGGTCATGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: ECERQHRPLSLQAQGHAGRQVNI*GHEFKT
Trigger: GGTCTTGAACTCATGACCTCAGATGTTCACTTGTCT...GCCTGCGTGCCCCTGTGCTTGGAGAGAAAGGGGCCGGTGCTGGCGCTCGCATTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACTCAGCCCTGCCTTCCTaGAGTTTCTGTATCCACTAC +
Preference number: 4 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHSALPS*SFCIHY
Trigger: GTAGTGGATACAGAAACTTCAGGAAGGCAGGGCTGA...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp GGCTGCGATGCATTACTGCCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTCCGTCCTGCGAACGCTaGCGCCAGCAGCAGCGAAAA +
Preference number: 4 (lower is better)
Translates to: GCDALLPPPLAYSITSASPSCER*RQQQRK
Trigger: TTTTCGCTGCTGCTGGCGGCAGCGTTCGCAGGACGG...AGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGGCAGTAATGCATCGCAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp AGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCCTCCTTCACATCCTGTaGTGTGTAGATGTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: RGSVPWPGCSGSLAPLPFLLHIL*CVDVGD
Trigger: GTCACCCACATCTACACAGCACAGGATGTGAAGGAG...GAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp CACACCTGCAAAGACCCTCTCCAGAGCCACCGCCCACCTCCGCGCAGCCATCCAAGGGGTACCTTCAAATaGCAGGGGTTCCACTATGTA +
Preference number: 4 (lower is better)
Translates to: HTCKDPLQSHRPPPRSHPRGTFK*QGFHYV
Trigger: TACATAGTGGAACCCCTGGCATTTGAAGGTACCCCT...TGGATGGCTGCGCGGAGGTGGGCGGTGGCTCTGGAGAGGGTCTTTGCAGGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp CGCCTCTGGCTTACAGTATCACTTCTGCATCTGAAACCAGGAGGGGGCAGTCTGCAGCACCCTCCTCGGTaGCTGGGGCTCAGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: RLWLTVSLLHLKPGGGSLQHPPR*LGLRSV
Trigger: AACAGACCTGAGCCCCAGGCACCGAGGAGGGTGCTG...CAGACTGCCCCCTCCTGGTTTCAGATGCAGAAGTGATACTGTAAGCCAGAGGCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp CCTGGAACCTGTCCATTGTTACCCCAGCCCAGGGCCCAGCCAAAGAACTTAACAGCAGGGTCGCACCTGTaGAGGGTCCTTGTCTGCGGA +
Preference number: 4 (lower is better)
Translates to: PGTCPLLPQPRAQPKNLTAGSHL*RVLVCG
Trigger: TCCGCAGACAAGGACCCTGCACAGGTGCGACCCTGC...TGTTAAGTTCTTTGGCTGGGCCCTGGGCTGGGGTAACAATGGACAGGTTCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp CCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCAGCGAAAACCAAAGCCTaGAGCTTGTCATGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: PLARMQWKPGSTTIHLQPAKTKA*SLSWPA
Trigger: AGCGGGCCATGACAAGCTCCAGGCTTTGGTTTTCGC...TGGCTGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp AGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCCAGGATGCTAGAGAGTaGCAGGTAATGGCGAGATGT +
Preference number: 4 (lower is better)
Translates to: RGSVPWPGCSGSLAPLPFQDARE*QVMARC
Trigger: ACATCTCGCCATTACCTGCCACTCTCTAGCATCCTG...GAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp GTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCAGAGAGAAGGGCCCGGAGACTGGGATTCACTaGTCCAAAGGTGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: VRAIGYTVQVPGGREKGPETGIH*SKGARG
Trigger: CCCTCTGGCACCTTTGGACCAGTGAATCCCAGTCTC...CGGGCCCTTCTCTCTGCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CCA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATAAAGTCCTGGATCTCTaGGTTGGACTTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHKVLDL*VGLPAG
Trigger: ACCTGCTGGAAGTCCAACCCAGAGATCCAGGACTTT...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp AACTCCTGCTCACAGAAGCCTACATTGAGGGGTTGGGCCTGGACACCTCGCCTCACCCTCCTCGGTGCCTaGGGCTCAGGTCTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: NSCSQKPTLRGWAWTPRLTLLGA*GSGLFK
Trigger: TTTGAACAGACCTGAGCCCCAGGCACCGAGGAGGGT...GAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGAGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR CCA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACATTAGGGCAGGTGTCTaGAATATGGTCAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHIRAGV*NMVRSG
Trigger: CCCACTCCTGACCATATTCCAGACACCTGCCCTAAT...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp AGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCCTGGGAAGACAGAGCTaGCTTCTAAGAAGAATGTGC +
Preference number: 4 (lower is better)
Translates to: RGSVPWPGCSGSLAPLPFLGRQS*LLRRMC
Trigger: GCACATTCTTCTTAGAAGTCAGCTCTGTCTTCCCAG...GAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR TCA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACACGTTATTTTGGAATTaGCCAGGGCCTCTGAGTCCT +
Preference number: 4 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHTLFWN*PGPLSP
Trigger: AGGACTCAGAGGCCCTGGTCAATTCCAAAATAACGT...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp CCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGAAGATGCTTTGGGCTaGAAATGGTTGGGAGGAGGG +
Preference number: 4 (lower is better)
Translates to: PSPGQDAVEAWLHYHSPTEDALG*KWLGGG
Trigger: CCCTCCTCCCAACCATTTTCAGCCCAAAGCATCTTC...TGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp CCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCAAAGGAGAGGAGAGGTTaGAGACTCTCCCAGTCTCCA +
Preference number: 4 (lower is better)
Translates to: PLARMQWKPGSTTIHLQPKERRG*RLSQSP
Trigger: TGGAGACTGGGAGAGTCTTCAACCTCTCCTCTCCTT...TGGCTGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp CCTTCTGCTCAGGGGTACCTTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTACTGAGCAGCCGGGCTaGGCGGCCGAGCTGACATCG +
Preference number: 4 (lower is better)
Translates to: PSAQGYLQMPGVPLCRNPTEQPG*AAELTS
Trigger: CGATGTCAGCTCGGCCGCGCAGCCCGGCTGCTCAGT...AGGATTTCTACATAGTGGAACCCCTGGCATTTGAAGGTACCCCTGAGCAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR GCA 90 bp CCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTACTGAGCAGCCGGGCTaGGCGGCCGAGCTGACATCG +
Preference number: 4 (lower is better)
Translates to: PGVPLCRNPSSQGHRIYGTEQPG*AAELTS
Trigger: CGATGTCAGCTCGGCCGCGCAGCCCGGCTGCTCAGT...ACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR GCA 90 bp GCAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCAGGATCATCTACCAGATaGCAGTGGAACACGTTCAAT +
Preference number: 4 (lower is better)
Translates to: ARGSVPWPGCSGSLAPLPGSSTR*QWNTFN
Trigger: ATTGAACGTGTTCCACTGGCATCTGGTAGATGATCC...TGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp CCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCAGATACCCCGGAGCCGTaGGTATTCAATGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: PLARMQWKPGSTTIHLQPDTPEP*VFNDLL
Trigger: AAGGAGGTCATTGAATACGCACGGCTCCGGGGTATC...TGGCTGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp AGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATACCCCGGAGCCGTGCGATACCCCGGAGCCGTaGGTATTCAATGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: SVARSVKLCKHTDTPEPCDTPEP*VFNDLL
Trigger: AAGGAGGTCATTGAATACGCACGGCTCCGGGGTATC...GCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR GCA 90 bp AGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATACCCCGGAGCCGTGCAGGAGTGTCAAACTCTaGAAGCACACGGATACCCCG +
Preference number: 4 (lower is better)
Translates to: SVARSVKLCKHTDTPEPCRSVKL*KHTDTP
Trigger: CGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCCT...GCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR GCA 90 bp CCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAAGGAGTGTCAAACTCTaGAAGCACACGGATACCCCG +
Preference number: 4 (lower is better)
Translates to: PSPGQDAVEAWLHYHSPTRSVKL*KHTDTP
Trigger: CGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCCT...TGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACAGGGGTACCTTCAAATaGCAGGGGTTCCACTATGTA +
Preference number: 4 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHRGTFK*QGFHYV
Trigger: TACATAGTGGAACCCCTGGCATTTGAAGGTACCCCT...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATATCACCAGAGCCTTCTaGTCAGGGGTACCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHITRAF*SGVPSN
Trigger: ATTTGAAGGTACCCCTGAGCAGAAGGCTCTGGTGAT...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACATCACCAGAGCCTTCTaGTCAGGGGTACCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHITRAF*SGVPSN
Trigger: ATTTGAAGGTACCCCTGAGCAGAAGGCTCTGGTGAT...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp CACACCTGCAAAGACCCTCTCCAGAGCCACCGCCCACCTCCGCGCAGCCATCCACGACCTTCAGGTAAATaGTCTTATGATCAGTGGACC +
Preference number: 4 (lower is better)
Translates to: HTCKDPLQSHRPPPRSHPRPSGK*SYDQWT
Trigger: GGTCCACTGATCATAAGAGCATTTACCTGAAGGTCG...TGGATGGCTGCGCGGAGGTGGGCGGTGGCTCTGGAGAGGGTCTTTGCAGGTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp GCAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATCCAAAGTAGGAAGCTaGTTACATCCAGGTGTGACT +
Preference number: 4 (lower is better)
Translates to: ARGSVPWPGCSGSLAPLPSKVGS*LHPGVT
Trigger: AGTCACACCTGGATGTAACCAGCTTCCTACTTTGGA...TGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp TGGTCCCCAGGACAAAGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATCCTACATTGAGGGGTTaGGCCTGGACACCTCGCCTC +
Preference number: 4 (lower is better)
Translates to: WSPGQSVARSVKLCKHTDPTLRG*AWTPRL
Trigger: GAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGG...ATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGGACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR CCA 90 bp CCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGATGCAGTGGAAGCCTaGCTCCACTACCATTCACCT +
Preference number: 4 (lower is better)
Translates to: PSPGQDAVEAWLHYHSPTDAVEA*LHYHSP
Trigger: AGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATC...TGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp CCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCAGATGCAGTGGAAGCCTaGCTCCACTACCATTCACCT +
Preference number: 4 (lower is better)
Translates to: PLARMQWKPGSTTIHLQPDAVEA*LHYHSP
Trigger: AGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATC...TGGCTGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp CCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACATACTGCCCCCGCCTCTaGCTTACAGTATCACTTCTG +
Preference number: 4 (lower is better)
Translates to: PSPGQDAVEAWLHYHSPTYCPRL*LTVSLL
Trigger: CAGAAGTGATACTGTAAGCCAGAGGCGGGGGCAGTA...TGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CAA 72 bp GGCTCCTGTGGTGGGTGCCAGTGCTGGGACCTTAACTaGTGTATCTGGGCTATAGCCCTGGACTTGGCTAGG +
Preference number: 4 (lower is better)
Translates to: GSCGGCQCWDLN*CIWAIALDLAR
Trigger: CCTAGCCAAGTCCAGGGCTATAGCCCAGATACACAAGTTAAGGTCCCAGCACTGGCACCCACCACAGGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CAA 72 bp GATCTGGCCTGCTCCGCCTTGCGAAGGCCCCACAGCTaGCTTACCTCAGCAATTCACAGCGGAAGTGTGACA +
Preference number: 4 (lower is better)
Translates to: DLACSALRRPHS*LTSAIHSGSVT
Trigger: TGTCACACTTCCGCTGTGAATTGCTGAGGTAAGCAAGCTGTGGGGCCTTCGCAAGGCGGAGCAGGCCAGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567027.5
CDS-3UTR TCA 90 bp CCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCAGAGAGAATATGCCGTTTCCCTGTaGGGTAAGGACGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: PSSQGHRIYGSGTRGQREYAVSL*GKDGAK
Trigger: CTTGGCCCCGTCCTTACCTCACAGGGAAACGGCATA...TTCTCTCTGCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR TCA 90 bp CCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCATGGACTTCCAGCAGGTaGAATCAACCTCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: PLARMQWKPGSTTIHLQPWTSSR*NQPHLL
Trigger: GAGGAGATGAGGTTGATTTCACCTGCTGGAAGTCCA...TGGCTGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR TCA 90 bp AGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATACCCCGGAGCCGTGCCTCGCCACACCTGTATaGTTGTGTCTGGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: SVARSVKLCKHTDTPEPCLATPV*LCLAES
Trigger: AGATTCAGCCAGACACAATCATACAGGTGTGGCGAG...GCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR TCA 90 bp AGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCTTCACAGCGGAAGTGTaGCAAACGTTCATAGGCAAA +
Preference number: 4 (lower is better)
Translates to: RGSVPWPGCSGSLAPLPFFTAEV*QTFIGK
Trigger: TTTGCCTATGAACGTTTGTCACACTTCCGCTGTGAA...GAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR TCA 90 bp AGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCCTGCCTTCATCCACTTaGGACTTAAAACTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: RGSVPWPGCSGSLAPLPFLPSST*DLKLSV
Trigger: GACACTGAGTTTTAAGTCTCAAGTGGATGAAGGCAG...GAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp TGGTTACATCCAGGTGTGACTACAGAGACAACCAACACATTCTTCTCCAGTGTAGGCCGTCGCCCGTCCTaGGAACGCTGCCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: WLHPGVTTETTNTFFSSVGRRPS*ERCRQQ
Trigger: CTGCTGGCGGCAGCGTTCGCAGGACGGGCGACGGCC...TACACTGGAGAAGAATGTGTTGGTTGTCTCTGTAGTCACACCTGGATGTAACCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR GCA 90 bp GGAAAAGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGATGCCAGTGGACTGAGCAGCCGGGCTaGGCGGCCGAGCTGACATCG +
Preference number: 4 (lower is better)
Translates to: GKVKLSYGKEGSSTRCQWTEQPG*AAELTS
Trigger: CGATGTCAGCTCGGCCGCGCAGCCCGGCTGCTCAGT...CCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR GCA 90 bp CGCCTCTGGCTTACAGTATCACTTCTGCATCTGAAACCAGGAGGGGGCAGTCTGTCACTGGTCCAAAGGTaGCAGAGGGCTCAGACCCAG +
Preference number: 4 (lower is better)
Translates to: RLWLTVSLLHLKPGGGSLSLVQR*QRAQTQ
Trigger: CTGGGTCTGAGCCCTCTGGCACCTTTGGACCAGTGA...CAGACTGCCCCCTCCTGGTTTCAGATGCAGAAGTGATACTGTAAGCCAGAGGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp CAGCCAGCACCCTCCTCGGTGCCTGGGGCTCAGGTCTGTTCAAACTCCTGCTCACAGATGTCAACTTGTTaGTCCACAGCCTTTCGGCAA +
Preference number: 4 (lower is better)
Translates to: QPAPSSVPGAQVCSNSCSQMSTC*STAFRQ
Trigger: TTGCCGAAAGGCTGTGGAGCAACAAGTTGACATCTG...TGAGCAGGAGTTTGAACAGACCTGAGCCCCAGGCACCGAGGAGGGTGCTGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR GCA 90 bp AGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCGTCTGTTCAAACTCCTaGTCACAGAAGCCTACATTG +
Preference number: 4 (lower is better)
Translates to: RGSVPWPGCSGSLAPLPFVCSNS*SQKPTL
Trigger: CAATGTAGGCTTCTGTGAGCAGGAGTTTGAACAGAC...GAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATGTCTGTTCAAACTCCTaGTCACAGAAGCCTACATTG +
Preference number: 4 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHVCSNS*SQKPTL
Trigger: CAATGTAGGCTTCTGTGAGCAGGAGTTTGAACAGAC...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp CTGGATGTAGAAGGACTCCAGCTGCTTGAAGTCCTCACCGAAGCCTTTCTTCCTGTCCCCTGGCCAGGATaGAGTGGAAGCCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: LDVEGLQLLEVLTEAFLPVPWPG*SGSLAP
Trigger: TGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGAC...AGGAAGAAAGGCTTCGGTGAGGACTTCAAGCAGCTGGAGTCCTTCTACATCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR GCA 90 bp CCACCCCCTGGTGGTGCACAGCACACAAGATGGCCTGTGTTCCGCTCAGGGGTGCATTCCCTGCGAAGATaGTTTGGGCTGAAAATGGTT +
Preference number: 4 (lower is better)
Translates to: PPPGGAQHTRWPVFRSGVHSLRR*FGLKMV
Trigger: AACCATTTTCAGCCCAAAGCATCTTCGCAGGGAATG...CACCCCTGAGCGGAACACAGGCCATCTTGTGTGCTGTGCACCACCAGGGGGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp AGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCTTCTTCTCCAGTGTATaGCGTTTCCCTAGGAAGACA +
Preference number: 4 (lower is better)
Translates to: RGSVPWPGCSGSLAPLPFFFSSV*RFPRKT
Trigger: TGTCTTCCTAGGGAAACGGCATACACTGGAGAAGAA...GAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566304.5
CDS-3UTR CCA 90 bp CCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACACAGGATGCTAGAGAGTaGCAGGTAATGGCGAGATGT +
Preference number: 4 (lower is better)
Translates to: PSPGQDAVEAWLHYHSPTQDARE*QVMARC
Trigger: ACATCTCGCCATTACCTGCCACTCTCTAGCATCCTG...TGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp GCAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCAAGTGAAGCTCTCATATaGGAAGGAAGGATCATCTAC +
Preference number: 4 (lower is better)
Translates to: ARGSVPWPGCSGSLAPLPSEALI*EGRIIY
Trigger: GTAGATGATCCTTCCTTCCCATATGAGAGCTTCACT...TGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp GGGATTCACTGGTCCAAAGGTGCCAGAGGGCTCAGACCCAGAGTAGCAAGGAGTGAGACTGGGATTCACTaGTCCAAAGGTGCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: GIHWSKGARGLRPRVARSETGIH*SKGARG
Trigger: CCCTCTGGCACCTTTGGACCAGTGAATCCCAGTCTC...ACTCCTTGCTACTCTGGGTCTGAGCCCTCTGGCACCTTTGGACCAGTGAATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTTCCTCATAAAGTCCTaGATCTCTGGGTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHFLIKS*ISGLDF
Trigger: GAAGTCCAACCCAGAGATCCAGGACTTTATGAGGAA...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp CCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTGAAACCAGGAGGGGGCAGCTGCAGTTGACCTGTTaGCATTCGAGGTCTGACGAC +
Preference number: 4 (lower is better)
Translates to: PPPLAYSITSASETRRGQLQLTC*HSRSDD
Trigger: GTCGTCAGACCTCGAATGCCAACAGGTCAACTGCAG...CTGCCCCCTCCTGGTTTCAGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATAGCGATTCTGTTCATTaGAACAGACTGGGTGGTAAC +
Preference number: 4 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHSDSVH*NRLGGN
Trigger: GTTACCACCCAGTCTGTTCCAATGAACAGAATCGCT...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp GGCTGCGATGCATTACTGCCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTGCACAGCACACAAGATaGCCTGTGTTCCGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: GCDALLPPPLAYSITSASAQHTR*PVFRSG
Trigger: CCCTGAGCGGAACACAGGCCATCTTGTGTGCTGTGC...AGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGGCAGTAATGCATCGCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp GATGGACATGGTGGCACGTGCCTATTAATTCCAGTTACTCAGGAGGCTGATGCAGAGGTTTGGAAGTTCTaGGGCCAGGGCCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: DGHGGTCLLIPVTQEADAEVWKF*GQGQRA
Trigger: GGCCCTCTGGCCCTGGCCTCAGAACTTCCAAACCTC...TGCATCAGCCTCCTGAGTAACTGGAATTAATAGGCACGTGCCACCATGTCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp CCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCAGGTTACATCCAGGTGTaGCTACAGAGACAACCAACA +
Preference number: 4 (lower is better)
Translates to: PLARMQWKPGSTTIHLQPGYIQV*LQRQPT
Trigger: TGTTGGTTGTCTCTGTAGTCACACCTGGATGTAACC...TGGCTGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR TCA 90 bp CCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTGAAACCAGGAGGGGGCAGTGGACTTCCAGCAGGTaGAATCAACCTCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: PPPLAYSITSASETRRGQWTSSR*NQPHLL
Trigger: GAGGAGATGAGGTTGATTTCACCTGCTGGAAGTCCA...CTGCCCCCTCCTGGTTTCAGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp ATACCTGGTCCCCAGGACAAAGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACACAGAAGCCTACATTaGGGGGTTGGGCCTGGACAC +
Preference number: 4 (lower is better)
Translates to: IPGPQDKVWPGVSNSASTHRSLH*GVGPGH
Trigger: GTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTG...TGTGCTTGCAGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGGACCAGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR TCA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACGGGCGACAGAGTTTTTaGGACAGTCTCAAAAACAAA +
Preference number: 4 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHGRQSF*DSLKNK
Trigger: TTTGTTTTTGAGACTGTCTCAAAAACTCTGTCGCCC...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp AACCGCCAAGGAAATCCTCACCTAAAATGGCTGCGATGCATTACTGCCCCCGCCAGCAACGGTGGAGGGTaGGGAACAGCACACTTTACC +
Preference number: 4 (lower is better)
Translates to: NRQGNPHLKWLRCITAPASNGGG*GTAHFT
Trigger: GGTAAAGTGTGCTGTTCCTCACCCTCCACCGTTGCT...GGCGGGGGCAGTAATGCATCGCAGCCATTTTAGGTGAGGATTTCCTTGGCGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp CCACCAATCACCAGAGCCTTCTGCTCAGGGGTACCTTCAAATGCCAGGGGTTCCGATACCCCGGAGCCGTaGGTATTCAATGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: PPITRAFCSGVPSNARGSDTPEP*VFNDLL
Trigger: AAGGAGGTCATTGAATACGCACGGCTCCGGGGTATC...GGAACCCCTGGCATTTGAAGGTACCCCTGAGCAGAAGGCTCTGGTGATTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR GCA 90 bp CCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCACAGATGTCAACTTGTTaGTCCACAGCCTTTCGGCAA +
Preference number: 4 (lower is better)
Translates to: PLARMQWKPGSTTIHLQPQMSTC*STAFRQ
Trigger: TTGCCGAAAGGCTGTGGAGCAACAAGTTGACATCTG...TGGCTGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp CCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAAGAGAAAATCACACCTaGAAAGACCCTCTCCAGAGC +
Preference number: 4 (lower is better)
Translates to: PSPGQDAVEAWLHYHSPTRENHT*KDPLQS
Trigger: GCTCTGGAGAGGGTCTTTGCAGGTGTGATTTTCTCT...TGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp AACCGCCAAGGAAATCCTCACCTAAAATGGCTGCGATGCATTACTGCCCCCGCCAGACTGGGTGGTAACTaGAGGCCACTGCAGTTGACC +
Preference number: 4 (lower is better)
Translates to: NRQGNPHLKWLRCITAPARLGGN*RPLQLT
Trigger: GGTCAACTGCAGTGGCCTGCAGTTACCACCCAGTCT...GGCGGGGGCAGTAATGCATCGCAGCCATTTTAGGTGAGGATTTCCTTGGCGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp AGGGTACTAGTCCAGAGGTGGCTAGATGGGATTGGGTCTCTAAGGGAGAACTCCCTAAGGGAGAACTCCTaGTCTCAGGCCCAACCCTCC +
Preference number: 4 (lower is better)
Translates to: RVLVQRWLDGIGSLRENSLRENS*SQAQPS
Trigger: GGAGGGTTGGGCCTGAGAGCAGGAGTTCTCCCTTAG...GGAGTTCTCCCTTAGAGACCCAATCCCATCTAGCCACCTCTGGACTAGTACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000566672.5
CDS-3UTR CCA 90 bp ATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACCTTGTCATGGCCCGCTaGTCTCCCCTCTCGGAGGGG +
Preference number: 4 (lower is better)
Translates to: MPGVPLCRNPSSQGHRIYLVMAR*SPLSEG
Trigger: CCCCTCCGAGAGGGGAGACCAGCGGGCCATGACAAG...GTATATCCTATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp CGCCTCTGGCTTACAGTATCACTTCTGCATCTGAAACCAGGAGGGGGCAGTCTGGCGAAAACCAAAGCCTaGAGCTTGTCATGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: RLWLTVSLLHLKPGGGSLAKTKA*SLSWPA
Trigger: AGCGGGCCATGACAAGCTCCAGGCTTTGGTTTTCGC...CAGACTGCCCCCTCCTGGTTTCAGATGCAGAAGTGATACTGTAAGCCAGAGGCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp GTCCCCAGGACAAAGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATACGCGAAAACCAAAGCCTaGAGCTTGTCATGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: VPRTKCGQECQTLQAHGYAKTKA*SLSWPA
Trigger: AGCGGGCCATGACAAGCTCCAGGCTTTGGTTTTCGC...GTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATGAGAGGAGTAAACACTaGTCATCATTTATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHERSKH*SSFMVR
Trigger: CCTGACCATAAATGATGACCAGTGTTTACTCCTCTC...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACGATTTCCAAACAAGCTaGCTAAAAGTCTCCAGACCT +
Preference number: 4 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHDFQTS*LKVSRP
Trigger: AGGTCTGGAGACTTTTAGCCAGCTTGTTTGGAAATC...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268097.10
ENST00000566304.5
CDS-3UTR CCA 90 bp GGGGCAGAGAGAAGGGCCCGGAAGCCGGCCTTGGTGACCAGTTCCAGCTCCTTCTCTACCAGATGCCAGTaGAACACGTTCAATTTATTG +
Preference number: 4 (lower is better)
Translates to: GAERRARKPALVTSSSSFSTRCQ*NTFNLL
Trigger: CAATAAATTGAACGTGTTCCACTGGCATCTGGTAGA...GAAGGAGCTGGAACTGGTCACCAAGGCCGGCTTCCGGGCCCTTCTCTCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CCA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTTCATATAGTTCACTaGAATATCCTCTCGCCACAC +
Preference number: 4 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHLHIVH*NILSPH
Trigger: GTGTGGCGAGAGGATATTCCAGTGAACTATATGAAG...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp AGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCCTTCATATAGTTCACTaGAATATCCTCTCGCCACAC +
Preference number: 4 (lower is better)
Translates to: RGSVPWPGCSGSLAPLPFLHIVH*NILSPH
Trigger: GTGTGGCGAGAGGATATTCCAGTGAACTATATGAAG...GAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp CCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTGAAACCAGGAGGGGGCAGTTGGGAGGAGGGGGATaGAAGTCGCCTACGTTATTT +
Preference number: 4 (lower is better)
Translates to: PPPLAYSITSASETRRGQLGGGG*KSPTLF
Trigger: AAATAACGTAGGCGACTTCCATCCCCCTCCTCCCAA...CTGCCCCCTCCTGGTTTCAGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CAA 72 bp TTCAAACTCCTGCTCACAGAAGCCTACATTGAGGGGTaGGGCCTGGACACCTCGCCTCAGCAATTCACAGCG +
Preference number: 4 (lower is better)
Translates to: FKLLLTEAYIEG*GLDTSPQQFTA
Trigger: CGCTGTGAATTGCTGAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGAGTTTGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
3UTR CAA 72 bp CAGGTCTGTTCAAACTCCTGCTCACAGAAGCCTACATaGAGGGGTTGGGCCTGGACACCTCGCCTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: QVCSNSCSQKPT*RGWAWTPRLSN
Trigger: ATTGCTGAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGAGTTTGAACAGACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR TCA 90 bp TCCACCAATCACCAGAGCCTTCTGCTCAGGGGTACCTTCAAATGCCAGGGGTTCGCCGTGCGTATTCAATaGCCTCCTTCACATCCTGTG +
Preference number: 4 (lower is better)
Translates to: STNHQSLLLRGTFKCQGFAVRIQ*PPSHPV
Trigger: CACAGGATGTGAAGGAGGTCATTGAATACGCACGGC...GAACCCCTGGCATTTGAAGGTACCCCTGAGCAGAAGGCTCTGGTGATTGGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR TCA 90 bp GAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCAGAAGGACTCCAGCTGCTTaGAGTCCTCACCGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: EILPVRAIGYTVQVPGGRRTPAA*SPHRSL
Trigger: AAGGCTTCGGTGAGGACTTCAAGCAGCTGGAGTCCT...TCTGCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR TCA 90 bp CATGGTGGCACGTGCCTATTAATTCCAGTTACTCAGGAGGCTGATGCACGAGAAGGAAGCCGGCCTTGGTaGCCAGTTCCAGCTCCTTCA +
Preference number: 4 (lower is better)
Translates to: HGGTCLLIPVTQEADAREGSRPW*PVPAPS
Trigger: TGAAGGAGCTGGAACTGGTCACCAAGGCCGGCTTCC...TTCTCGTGCATCAGCCTCCTGAGTAACTGGAATTAATAGGCACGTGCCACCATG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp CCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTGAAACCAGGAGGGGGCAGGCTGAAGGATGGTGTTaGAGGACCGAGTTTTACTCA +
Preference number: 4 (lower is better)
Translates to: PPPLAYSITSASETRRGQAEGWC*RTEFYS
Trigger: TGAGTAAAACTCGGTCCTTCAACACCATCCTTCAGC...CTGCCCCCTCCTGGTTTCAGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp CCTGGAACCTGTCCATTGTTACCCCAGCCCAGGGCCCAGCCAAAGAACTTAACACTAGGTGAAGGGAGATaGGTTGGGGCAACAGCGATT +
Preference number: 4 (lower is better)
Translates to: PGTCPLLPQPRAQPKNLTLGEGR*VGATAI
Trigger: AATCGCTGTTGCCCCAACTCATCTCCCTTCACCTAG...TGTTAAGTTCTTTGGCTGGGCCCTGGGCTGGGGTAACAATGGACAGGTTCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp TGCAAGCACACGGATACCCCGGAGCCGTGCGTATTCAATGACCTCCTTCACATCAGTACATGTTTGCTGTaGGGTAAGGACGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: CKHTDTPEPCVFNDLLHISTCLL*GKDGAK
Trigger: CTTGGCCCCGTCCTTACCTCACAGCAAACATGTACT...GATGTGAAGGAGGTCATTGAATACGCACGGCTCCGGGGTATCCGTGTGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR TCA 90 bp TCGTTGCACGGCCTGCTCTCTCTCAGGCCTGAAAGAAGGGTACTAGTCCAGAGGATTTATTGTACGCCATaGCATCCTCGGAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: SLHGLLSLRPERRVLVQRIYCTP*HPRRAP
Trigger: GGGAGCTCTCCGAGGATGTCATGGCGTACAATAAAT...CCTCTGGACTAGTACCCTTCTTTCAGGCCTGAGAGAGAGCAGGCCGTGCAACGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR GCA 90 bp CCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCAGGATCATCTACCAGATaGCAGTGGAACACGTTCAAT +
Preference number: 4 (lower is better)
Translates to: PLARMQWKPGSTTIHLQPGSSTR*QWNTFN
Trigger: ATTGAACGTGTTCCACTGGCATCTGGTAGATGATCC...TGGCTGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp TGCAAGCACACGGATACCCCGGAGCCGTGCGTATTCAATGACCTCCTTCACATCGATACCCCGGAGCCGTaGGTATTCAATGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: CKHTDTPEPCVFNDLLHIDTPEP*VFNDLL
Trigger: AAGGAGGTCATTGAATACGCACGGCTCCGGGGTATC...GATGTGAAGGAGGTCATTGAATACGCACGGCTCCGGGGTATCCGTGTGCTTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR GCA 90 bp TCCCCAGGACAAAGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATACCAGGAGTGTCAAACTCTaGAAGCACACGGATACCCCG +
Preference number: 4 (lower is better)
Translates to: SPGQSVARSVKLCKHTDTRSVKL*KHTDTP
Trigger: CGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCCT...GGTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR GCA 90 bp ATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCAGAGAGAGGAGTGTCAAACTCTaGAAGCACACGGATACCCCG +
Preference number: 4 (lower is better)
Translates to: ILPVRAIGYTVQVPGGRERSVKL*KHTDTP
Trigger: CGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCCT...CTCTCTGCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR GCA 90 bp AGAGCCTGGGGACCAGGTTTGTGTTGTCCACATATTCTCCCCACATACAAGCCTTCACTGGTCCAAAGGTaGCAGAGGGCTCAGACCCAG +
Preference number: 4 (lower is better)
Translates to: RAWGPGLCCPHILPTYKPSLVQR*QRAQTQ
Trigger: CTGGGTCTGAGCCCTCTGGCACCTTTGGACCAGTGA...AGGCTTGTATGTGGGGAGAATATGTGGACAACACAAACCTGGTCCCCAGGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR GCA 90 bp CCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAACACCACATAGCCCTTaGCATAAGAAGAGACGATGT +
Preference number: 4 (lower is better)
Translates to: PSPGQDAVEAWLHYHSPTTPHSP*HKKRRC
Trigger: ACATCGTCTCTTCTTATGGCAAGGGCTATGTGGTGT...TGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp CCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCAACACCACATAGCCCTTaGCATAAGAAGAGACGATGT +
Preference number: 4 (lower is better)
Translates to: PLARMQWKPGSTTIHLQPTPHSP*HKKRRC
Trigger: ACATCGTCTCTTCTTATGGCAAGGGCTATGTGGTGT...TGGCTGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR GCA 90 bp TTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATAGGACAGCACCCTCCTCGGTaGCTGGGGCTCAGGTCTGTT +
Preference number: 4 (lower is better)
Translates to: FKCQGFHYVEILPVRAIGQHPPR*LGLRSV
Trigger: AACAGACCTGAGCCCCAGGCACCGAGGAGGGTGCTG...TCCTATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR GCA 90 bp CTTCACATCCTGTGCTGTGTAGATGTGGGTGACAGGGTTGTAGGACCCCTTTCTCTAAGGGAGAACTCCTaGTCTCAGGCCCAACCCTCC +
Preference number: 4 (lower is better)
Translates to: LHILCCVDVGDRVVGPLSLRENS*SQAQPS
Trigger: GGAGGGTTGGGCCTGAGAGCAGGAGTTCTCCCTTAG...AGAAAGGGGTCCTACAACCCTGTCACCCACATCTACACAGCACAGGATGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000566672.5
CDS-3UTR GCA 90 bp AGTGTCAAACTCTGCAAGCACACGGATACCCCGGAGCCGTGCGTATTCAATGACCTTCAGAAGGCTCGTTaGACGGCCTGCTCTCTCTCA +
Preference number: 4 (lower is better)
Translates to: SVKLCKHTDTPEPCVFNDLQKAR*TACSLS
Trigger: TGAGAGAGAGCAGGCCGTGCAACGAGCCTTCTGAAG...GTCATTGAATACGCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR CCA 90 bp CCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCATCCAAAGTAGGAAGCTaGTTACATCCAGGTGTGACT +
Preference number: 4 (lower is better)
Translates to: PLARMQWKPGSTTIHLQPSKVGS*LHPGVT
Trigger: AGTCACACCTGGATGTAACCAGCTTCCTACTTTGGA...TGGCTGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp GTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCAGAGAGAAGGGCCCGTCCAAAGTAGGAAGCTaGTTACATCCAGGTGTGACT +
Preference number: 4 (lower is better)
Translates to: VRAIGYTVQVPGGREKGPSKVGS*LHPGVT
Trigger: AGTCACACCTGGATGTAACCAGCTTCCTACTTTGGA...CGGGCCCTTCTCTCTGCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CCA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACTCTACCAGATGCCAGTaGAACACGTTCAATTTATTG +
Preference number: 4 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHSTRCQ*NTFNLL
Trigger: CAATAAATTGAACGTGTTCCACTGGCATCTGGTAGA...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp AGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCCTTTCTCATGAGCTCTaGAAAAGTGAAGCTCTCATA +
Preference number: 4 (lower is better)
Translates to: RGSVPWPGCSGSLAPLPFLSHEL*KSEALI
Trigger: TATGAGAGCTTCACTTTTCCAGAGCTCATGAGAAAG...GAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATCTTTCTCATGAGCTCTaGAAAAGTGAAGCTCTCATA +
Preference number: 4 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHLSHEL*KSEALI
Trigger: TATGAGAGCTTCACTTTTCCAGAGCTCATGAGAAAG...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp CTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCAGAGAGAAGCCCCAGGACAAAGTGTaGCCAGGAGTGTCAAACTCT +
Preference number: 4 (lower is better)
Translates to: LPVRAIGYTVQVPGGREKPQDKV*PGVSNS
Trigger: AGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGG...CTTCTCTCTGCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR TCA 90 bp TCCAAAGTAGGAAGCTGGTTACATCCAGGTGTGACTACAGAGACAACCAACACAGAGGTTTGGAAGTTCTaGGGCCAGGGCCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: SKVGSWLHPGVTTETTNTEVWKF*GQGQRA
Trigger: GGCCCTCTGGCCCTGGCCTCAGAACTTCCAAACCTC...TGTGTTGGTTGTCTCTGTAGTCACACCTGGATGTAACCAGCTTCCTACTTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR TCA 90 bp CTTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATAGGGCTGCGCGGCCGAGCTaGCATCGTACTGGAATTGAA +
Preference number: 4 (lower is better)
Translates to: LQMPGVPLCRNPSSQGHRAARPS*HRTGIE
Trigger: TTCAATTCCAGTACGATGTCAGCTCGGCCGCGCAGC...CCTATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR TCA 90 bp GGACCCCTTTCTCATGAGCTCTGGAAAAGTGAAGCTCTCATATGGGAAGGAAGGTATGCCGTTTCCCTGTaGGGTAAGGACGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: GPLSHELWKSEALIWEGRYAVSL*GKDGAK
Trigger: CTTGGCCCCGTCCTTACCTCACAGGGAAACGGCATA...CCTTCCTTCCCATATGAGAGCTTCACTTTTCCAGAGCTCATGAGAAAGGGGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR TCA 90 bp CCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAACTCATAGGTATTATTaGGACTGGGATTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: PSPGQDAVEAWLHYHSPTTHRYY*DWDSLV
Trigger: GACCAGTGAATCCCAGTCTCAATAATACCTATGAGT...TGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR TCA 90 bp GCCTCTCCACCAATCACCAGAGCCTTCTGCTCAGGGGTACCTTCAAATGCCAGGCTGGGAAGACAGAGCTaGCTTCTAAGAAGAATGTGC +
Preference number: 4 (lower is better)
Translates to: ASPPITRAFCSGVPSNARLGRQS*LLRRMC
Trigger: GCACATTCTTCTTAGAAGTCAGCTCTGTCTTCCCAG...CCTGGCATTTGAAGGTACCCCTGAGCAGAAGGCTCTGGTGATTGGTGGAGAGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR TCA 90 bp TCAAACTCTGCAAGCACACGGATACCCCGGAGCCGTGCGTATTCAATGACCTCCTGGACTTCCAGCAGGTaGAATCAACCTCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: SNSASTRIPRSRAYSMTSWTSSR*NQPHLL
Trigger: GAGGAGATGAGGTTGATTTCACCTGCTGGAAGTCCA...GGAGGTCATTGAATACGCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR TCA 90 bp CTTCCTCATAAAGTCCTGGATCTCTGGGTTGGACTTCCTGGTCCCCAGGACAAAAGGACTCCAGCTGCTTaGAGTCCTCACCGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LPHKVLDLWVGLPGPQDKRTPAA*SPHRSL
Trigger: AAGGCTTCGGTGAGGACTTCAAGCAGCTGGAGTCCT...TTTGTCCTGGGGACCAGGAAGTCCAACCCAGAGATCCAGGACTTTATGAGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR TCA 90 bp GGGTACCTTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCAGGACTCCAGCTGCTTaGAGTCCTCACCGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: GYLQMPGVPLCRNPSSQGRTPAA*SPHRSL
Trigger: AAGGCTTCGGTGAGGACTTCAAGCAGCTGGAGTCCT...GCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAAGGTACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR TCA 90 bp AAGGATGGTGTTGAAGGACCGAGTTTTACTCAGATCCTTCTCAGCCCTGCCTTCTGCACGAGAATCGCTTaGACCCAGGAGGCAGAGGCT +
Preference number: 4 (lower is better)
Translates to: KDGVEGPSFTQILLSPAFCTRIA*TQEAEA
Trigger: AGCCTCTGCCTCCTGGGTTCAAGCGATTCTCGTGCA...GAAGGCAGGGCTGAGAAGGATCTGAGTAAAACTCGGTCCTTCAACACCATCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp TACACCTTGATCAAGTTTAGCTTCTTGGACTCAGTACTATACAGGGATACTAGAGGCCGTCGCCCGTCCTaGGAACGCTGCCGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: YTLIKFSFLDSVLYRDTRGRRPS*ERCRQQ
Trigger: CTGCTGGCGGCAGCGTTCGCAGGACGGGCGACGGCC...TCTAGTATCCCTGTATAGTACTGAGTCCAAGAAGCTAAACTTGATCAAGGTGTA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR GCA 90 bp GTCCCCAGGACAAAGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATACCTCCTTCACATCCTGTaGTGTGTAGATGTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: VPRTKCGQECQTLQAHGYLLHIL*CVDVGD
Trigger: GTCACCCACATCTACACAGCACAGGATGTGAAGGAG...GTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR GCA 90 bp TGGCACCTGTGCTCCCACATCCTGATATCCTACCCCTACGGCAATCCTTTGAGAAGGAGTGTCAAACTCTaGAAGCACACGGATACCCCG +
Preference number: 4 (lower is better)
Translates to: WHLCSHILISYPYGNPLRRSVKL*KHTDTP
Trigger: CGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCCT...TCTCAAAGGATTGCCGTAGGGGTAGGATATCAGGATGTGGGAGCACAGGTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp TCGTTGCACGGCCTGCTCTCTCTCAGGCCTGAAAGAAGGGTACTAGTCCAGAGGCATTCAGTACATGTTTaGTGTGAGGTAAGGACGGGG +
Preference number: 4 (lower is better)
Translates to: SLHGLLSLRPERRVLVQRHSVHV*CEVRTG
Trigger: CCCCGTCCTTACCTCACAGCAAACATGTACTGAATG...CCTCTGGACTAGTACCCTTCTTTCAGGCCTGAGAGAGAGCAGGCCGTGCAACGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR GCA 90 bp ACAATCCCTATCCCACATACCAAAGGGCAGCTGGAGGGATATAGACGGAAGTCAGCTCGTTGCACGGCCTaGTCTCTCTCAGGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: TIPIPHTKGQLEGYRRKSARCTA*SLSGLK
Trigger: TTTCAGGCCTGAGAGAGAGCAGGCCGTGCAACGAGC...TGACTTCCGTCTATATCCCTCCAGCTGCCCTTTGGTATGTGGGATAGGGATTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR CCA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACACTGGTCATCATTTATaGTCAGGGTATAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHTGHHL*SGYNSP
Trigger: TGGAGAATTATACCCTGACCATAAATGATGACCAGT...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp AGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATACCCCGGAGCCGTGCGAGAGGAGTAAACACTaGTCATCATTTATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: SVARSVKLCKHTDTPEPCERSKH*SSFMVR
Trigger: CCTGACCATAAATGATGACCAGTGTTTACTCCTCTC...GCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp CCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAAGTGAAGCTCTCATATaGGAAGGAAGGATCATCTAC +
Preference number: 4 (lower is better)
Translates to: PSPGQDAVEAWLHYHSPTSEALI*EGRIIY
Trigger: GTAGATGATCCTTCCTTCCCATATGAGAGCTTCACT...TGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp TTATTGAGACTGGGATTCACTGGTCCAAAGGTGCCAGAGGGCTCAGACCCAGAGCCCCAGGACAAAGTGTaGCCAGGAGTGTCAAACTCT +
Preference number: 4 (lower is better)
Translates to: LLRLGFTGPKVPEGSDPEPQDKV*PGVSNS
Trigger: AGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGG...CTCTGGGTCTGAGCCCTCTGGCACCTTTGGACCAGTGAATCCCAGTCTCAATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp AGTGTCCAGGATGCTAGAGAGTGGCAGGTAATGGCGAGATGTATCCAACAGCAATTGAGGGGTTGGGCCTaGACACCTCGCCTCAGCAAT +
Preference number: 4 (lower is better)
Translates to: SVQDAREWQVMARCIQQQLRGWA*TPRLSN
Trigger: ATTGCTGAGGCGAGGTGTCCAGGCCCAACCCCTCAA...TTGCTGTTGGATACATCTCGCCATTACCTGCCACTCTCTAGCATCCTGGACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR CCA 90 bp AAGGATGGTGTTGAAGGACCGAGTTTTACTCAGATCCTTCTCAGCCCTGCCTTCCAGGAGGGGGCAGTCTaGGTCCACGACGAGACATTT +
Preference number: 4 (lower is better)
Translates to: KDGVEGPSFTQILLSPAFQEGAV*VHDETF
Trigger: AAATGTCTCGTCGTGGACCCAGACTGCCCCCTCCTG...GAAGGCAGGGCTGAGAAGGATCTGAGTAAAACTCGGTCCTTCAACACCATCCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp CTTCAGGTAAATGCTCTTATGATCAGTGGACCAAAGGAGCAACGGTGGAGGGTGTTCCCCACCCCCTGGTaGTGCACAGCACACAAGATG +
Preference number: 4 (lower is better)
Translates to: LQVNALMISGPKEQRWRVFPTPW*CTAHKM
Trigger: CATCTTGTGTGCTGTGCACCACCAGGGGGTGGGGAA...CACCCTCCACCGTTGCTCCTTTGGTCCACTGATCATAAGAGCATTTACCTGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp ACCCCGGAGCCGTGCGTATTCAATGACCTCCTTCACATCCTGTGCTGTGTAGATCCAGAGGTGGCTAGATaGGATTGGGTCTCTAAGGGA +
Preference number: 4 (lower is better)
Translates to: TPEPCVFNDLLHILCCVDPEVAR*DWVSKG
Trigger: TCCCTTAGAGACCCAATCCCATCTAGCCACCTCTGG...ATCTACACAGCACAGGATGTGAAGGAGGTCATTGAATACGCACGGCTCCGGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000566672.5
CDS-3UTR CCA 90 bp TGGTCCCCAGGACAAAGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATGTACTAGTCCAGAGGTaGCTAGATGGGATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: WSPGQSVARSVKLCKHTDVLVQR*LDGIGS
Trigger: AGACCCAATCCCATCTAGCCACCTCTGGACTAGTAC...ATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000566672.5
CDS-3UTR TCA 90 bp TATGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGTATGCCGTTTCCCTGTaGGGTAAGGACGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: YVEILPVRAIGYTVQVPGYAVSL*GKDGAK
Trigger: CTTGGCCCCGTCCTTACCTCACAGGGAAACGGCATA...CCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTACATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR TCA 90 bp GGCTGCGATGCATTACTGCCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTGGTTACATCCAGGTGTaGCTACAGAGACAACCAACA +
Preference number: 4 (lower is better)
Translates to: GCDALLPPPLAYSITSASGYIQV*LQRQPT
Trigger: TGTTGGTTGTCTCTGTAGTCACACCTGGATGTAACC...AGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGGCAGTAATGCATCGCAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp TCAAACTCTGCAAGCACACGGATACCCCGGAGCCGTGCGTATTCAATGACCTCCGGTTACATCCAGGTGTaGCTACAGAGACAACCAACA +
Preference number: 4 (lower is better)
Translates to: SNSASTRIPRSRAYSMTSGYIQV*LQRQPT
Trigger: TGTTGGTTGTCTCTGTAGTCACACCTGGATGTAACC...GGAGGTCATTGAATACGCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR TCA 90 bp ATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCAGAGAGGGTTACATCCAGGTGTaGCTACAGAGACAACCAACA +
Preference number: 4 (lower is better)
Translates to: ILPVRAIGYTVQVPGGREGYIQV*LQRQPT
Trigger: TGTTGGTTGTCTCTGTAGTCACACCTGGATGTAACC...CTCTCTGCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR TCA 90 bp CTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCAGAGAGAAGGGTTACATCCAGGTGTaGCTACAGAGACAACCAACA +
Preference number: 4 (lower is better)
Translates to: LPVRAIGYTVQVPGGREKGYIQV*LQRQPT
Trigger: TGTTGGTTGTCTCTGTAGTCACACCTGGATGTAACC...CTTCTCTCTGCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR TCA 90 bp GTATCATTTCAGCTTTCCTCACAGTCTCACTGTCCCAGAAGTCTAGGGGCAATGGCAGGCCACTGCAGTTaGCCTGTTGGCATTCGAGGT +
Preference number: 4 (lower is better)
Translates to: VSFQLSSQSHCPRSLGAMAGHCS*PVGIRG
Trigger: ACCTCGAATGCCAACAGGTCAACTGCAGTGGCCTGC...CATTGCCCCTAGACTTCTGGGACAGTGAGACTGTGAGGAAAGCTGAAATGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp TGGTTACATCCAGGTGTGACTACAGAGACAACCAACACATTCTTCTCCAGTGTACCGTCCTGCGAACGCTaGCGCCAGCAGCAGCGAAAA +
Preference number: 4 (lower is better)
Translates to: WLHPGVTTETTNTFFSSVPSCER*RQQQRK
Trigger: TTTTCGCTGCTGCTGGCGGCAGCGTTCGCAGGACGG...TACACTGGAGAAGAATGTGTTGGTTGTCTCTGTAGTCACACCTGGATGTAACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR GCA 90 bp CCAGTTCCAGCTCCTTCATATAGTTCACTGGAATATCCTCTCGCCACACCTGTATCACTGGTCCAAAGGTaGCAGAGGGCTCAGACCCAG +
Preference number: 4 (lower is better)
Translates to: PVPAPSYSSLEYPLATPVSLVQR*QRAQTQ
Trigger: CTGGGTCTGAGCCCTCTGGCACCTTTGGACCAGTGA...TACAGGTGTGGCGAGAGGATATTCCAGTGAACTATATGAAGGAGCTGGAACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR GCA 90 bp CTATGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGTCACTGGTCCAAAGGTaGCAGAGGGCTCAGACCCAG +
Preference number: 4 (lower is better)
Translates to: LCRNPSSQGHRIYGSGTRSLVQR*QRAQTQ
Trigger: CTGGGTCTGAGCCCTCTGGCACCTTTGGACCAGTGA...CCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTACATAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR GCA 90 bp CCTGGAACCTGTCCATTGTTACCCCAGCCCAGGGCCCAGCCAAAGAACTTAACATCTGTTGGTAGAAAATaGCCACCCTGTCCTTACAGG +
Preference number: 4 (lower is better)
Translates to: PGTCPLLPQPRAQPKNLTSVGRK*PPCPYR
Trigger: CCTGTAAGGACAGGGTGGGCATTTTCTACCAACAGA...TGTTAAGTTCTTTGGCTGGGCCCTGGGCTGGGGTAACAATGGACAGGTTCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp ACCTGTCCATTGTTACCCCAGCCCAGGGCCCAGCCAAAGAACTTAACAAATAACCTGTGGTGGCACCTGTaGTCCCACATCCTGATATCC +
Preference number: 4 (lower is better)
Translates to: TCPLLPQPRAQPKNLTNNLWWHL*SHILIS
Trigger: GGATATCAGGATGTGGGAGCACAGGTGCCACCACAG...GTTATTTGTTAAGTTCTTTGGCTGGGCCCTGGGCTGGGGTAACAATGGACAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp CTGCTCAGGGGTACCTTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGCGAAAACCAAAGCCTaGAGCTTGTCATGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: LLRGTFKCQGFHYVEILPAKTKA*SLSWPA
Trigger: AGCGGGCCATGACAAGCTCCAGGCTTTGGTTTTCGC...TGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAAGGTACCCCTGAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp GTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCAGAGAGAAGGGCCCGCTTTCTCATGAGCTCTaGAAAAGTGAAGCTCTCATA +
Preference number: 4 (lower is better)
Translates to: VRAIGYTVQVPGGREKGPLSHEL*KSEALI
Trigger: TATGAGAGCTTCACTTTTCCAGAGCTCATGAGAAAG...CGGGCCCTTCTCTCTGCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CCA 90 bp GTACGTCTGGATGTAGAAGGACTCCAGCTGCTTGAAGTCCTCACCGAAGCCTTTCCCCAGGACAAAGTGTaGCCAGGAGTGTCAAACTCT +
Preference number: 4 (lower is better)
Translates to: VRLDVEGLQLLEVLTEAFPQDKV*PGVSNS
Trigger: AGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGG...AAAGGCTTCGGTGAGGACTTCAAGCAGCTGGAGTCCTTCTACATCCAGACGTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR CCA 90 bp GTATCATTTCAGCTTTCCTCACAGTCTCACTGTCCCAGAAGTCTAGGGGCAATGACCCTCCTCGGTGCCTaGGGCTCAGGTCTGTTCAAA +
Preference number: 4 (lower is better)
Translates to: VSFQLSSQSHCPRSLGAMTLLGA*GSGLFK
Trigger: TTTGAACAGACCTGAGCCCCAGGCACCGAGGAGGGT...CATTGCCCCTAGACTTCTGGGACAGTGAGACTGTGAGGAAAGCTGAAATGATAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp TGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGGATGCAGTGGAAGCCTaGCTCCACTACCATTCACCT +
Preference number: 4 (lower is better)
Translates to: CRNPSSQGHRIYGSGTRGDAVEA*LHYHSP
Trigger: AGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATC...CCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTACA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR CCA 90 bp CATATGGGAAGGAAGGATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATAGGGGCTCCGTCCCCTaGCCAGGATGCAGTGGAAGC +
Preference number: 4 (lower is better)
Translates to: HMGRKDHLPDASGTRSIYRGSVP*PGCSGS
Trigger: GCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT...ATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR CCA 90 bp CATGGTGGCACGTGCCTATTAATTCCAGTTACTCAGGAGGCTGATGCACGAGAAACACTGACTCCAGCCTaGCTGTGCCCTTACCCTAAC +
Preference number: 4 (lower is better)
Translates to: HGGTCLLIPVTQEADARETLTPA*LCPYPN
Trigger: GTTAGGGTAAGGGCACAGCCAGGCTGGAGTCAGTGT...TTCTCGTGCATCAGCCTCCTGAGTAACTGGAATTAATAGGCACGTGCCACCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp TGGCACCTGTGCTCCCACATCCTGATATCCTACCCCTACGGCAATCCTTTGAGATGTTCCGCTCAGGGGTaGGACTTTCAATTTACAGCC +
Preference number: 4 (lower is better)
Translates to: WHLCSHILISYPYGNPLRCSAQG*DFQFTA
Trigger: GGCTGTAAATTGAAAGTCCCACCCCTGAGCGGAACA...TCTCAAAGGATTGCCGTAGGGGTAGGATATCAGGATGTGGGAGCACAGGTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp GTATCATTTCAGCTTTCCTCACAGTCTCACTGTCCCAGAAGTCTAGGGGCAATGGCCAGGAAGTCAGTCTaGAAACTTCCCCACCCCCTG +
Preference number: 4 (lower is better)
Translates to: VSFQLSSQSHCPRSLGAMARKSV*KLPHPL
Trigger: CAGGGGGTGGGGAAGTTTCCAGACTGACTTCCTGGC...CATTGCCCCTAGACTTCTGGGACAGTGAGACTGTGAGGAAAGCTGAAATGATAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp AAGGATGGTGTTGAAGGACCGAGTTTTACTCAGATCCTTCTCAGCCCTGCCTTCTCACTAGTGCTGTGGTaGCACCTGTGCTCCCACATC +
Preference number: 4 (lower is better)
Translates to: KDGVEGPSFTQILLSPAFSLVLW*HLCSHI
Trigger: GATGTGGGAGCACAGGTGCCACCACAGCACTAGTGA...GAAGGCAGGGCTGAGAAGGATCTGAGTAAAACTCGGTCCTTCAACACCATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp AGAGCCTGGGGACCAGGTTTGTGTTGTCCACATATTCTCCCCACATACAAGCCTCCAGAGGTGGCTAGATaGGATTGGGTCTCTAAGGGA +
Preference number: 4 (lower is better)
Translates to: RAWGPGLCCPHILPTYKPPEVAR*DWVSKG
Trigger: TCCCTTAGAGACCCAATCCCATCTAGCCACCTCTGG...AGGCTTGTATGTGGGGAGAATATGTGGACAACACAAACCTGGTCCCCAGGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000566672.5
CDS-3UTR TCA 90 bp CTCTCATATGGGAAGGAAGGATCATCTACCAGATGCCAGTGGAACACGTTCAATGCTGCGCGGCCGAGCTaGCATCGTACTGGAATTGAA +
Preference number: 4 (lower is better)
Translates to: LSYGKEGSSTRCQWNTFNAARPS*HRTGIE
Trigger: TTCAATTCCAGTACGATGTCAGCTCGGCCGCGCAGC...ATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR TCA 90 bp TGGATCTCTGGGTTGGACTTCCAGCAGGTGAAATCAACCTCATCTCCTCCAAGAGCCGTGCGTATTCAATaGCCTCCTTCACATCCTGTG +
Preference number: 4 (lower is better)
Translates to: WISGLDFQQVKSTSSPPRAVRIQ*PPSHPV
Trigger: CACAGGATGTGAAGGAGGTCATTGAATACGCACGGC...TCTTGGAGGAGATGAGGTTGATTTCACCTGCTGGAAGTCCAACCCAGAGATCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR TCA 90 bp TGGCACCTGTGCTCCCACATCCTGATATCCTACCCCTACGGCAATCCTTTGAGACTGGGAAGACAGAGCTaGCTTCTAAGAAGAATGTGC +
Preference number: 4 (lower is better)
Translates to: WHLCSHILISYPYGNPLRLGRQS*LLRRMC
Trigger: GCACATTCTTCTTAGAAGTCAGCTCTGTCTTCCCAG...TCTCAAAGGATTGCCGTAGGGGTAGGATATCAGGATGTGGGAGCACAGGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp AGAAAAATGCCACATTACTCTTTATTGAATGCGAGCGCCAGCACCGGCCCCTTTAGGACTCCAGCTGCTTaGAGTCCTCACCGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: RKMPHYSLLNASASTGPFRTPAA*SPHRSL
Trigger: AAGGCTTCGGTGAGGACTTCAAGCAGCTGGAGTCCT...AAAGGGGCCGGTGCTGGCGCTCGCATTCAATAAAGAGTAATGTGGCATTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp ACCTGTCCATTGTTACCCCAGCCCAGGGCCCAGCCAAAGAACTTAACAAATAACGAACATCTGAGGTCATaGGTTCAAGACCAGCCTGGC +
Preference number: 4 (lower is better)
Translates to: TCPLLPQPRAQPKNLTNNEHLRS*VQDQPG
Trigger: GCCAGGCTGGTCTTGAACTCATGACCTCAGATGTTC...GTTATTTGTTAAGTTCTTTGGCTGGGCCCTGGGCTGGGGTAACAATGGACAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp CTTCAGGTAAATGCTCTTATGATCAGTGGACCAAAGGAGCAACGGTGGAGGGTGTATCACTTCTGCATCTaGAACCAGGAGGGGGCAGTC +
Preference number: 4 (lower is better)
Translates to: LQVNALMISGPKEQRWRVYHFCI*NQEGAV
Trigger: GACTGCCCCCTCCTGGTTTCAGATGCAGAAGTGATA...CACCCTCCACCGTTGCTCCTTTGGTCCACTGATCATAAGAGCATTTACCTGAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp TACACCTTGATCAAGTTTAGCTTCTTGGACTCAGTACTATACAGGGATACTAGAACTGAGCAGCCGGGCTaGGCGGCCGAGCTGACATCG +
Preference number: 4 (lower is better)
Translates to: YTLIKFSFLDSVLYRDTRTEQPG*AAELTS
Trigger: CGATGTCAGCTCGGCCGCGCAGCCCGGCTGCTCAGT...TCTAGTATCCCTGTATAGTACTGAGTCCAAGAAGCTAAACTTGATCAAGGTGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR GCA 90 bp CTTCAGGTAAATGCTCTTATGATCAGTGGACCAAAGGAGCAACGGTGGAGGGTGGATACCCCGGAGCCGTaGGTATTCAATGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: LQVNALMISGPKEQRWRVDTPEP*VFNDLL
Trigger: AAGGAGGTCATTGAATACGCACGGCTCCGGGGTATC...CACCCTCCACCGTTGCTCCTTTGGTCCACTGATCATAAGAGCATTTACCTGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp ATCCAGAGTGTCCAGGATGCTAGAGAGTGGCAGGTAATGGCGAGATGTATCCAAGATACCCCGGAGCCGTaGGTATTCAATGACCTCCTT +
Preference number: 4 (lower is better)
Translates to: IQSVQDAREWQVMARCIQDTPEP*VFNDLL
Trigger: AAGGAGGTCATTGAATACGCACGGCTCCGGGGTATC...TTGGATACATCTCGCCATTACCTGCCACTCTCTAGCATCCTGGACACTCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR GCA 90 bp GTCCCCAGGACAAAGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATACACACCACATAGCCCTTaGCATAAGAAGAGACGATGT +
Preference number: 4 (lower is better)
Translates to: VPRTKCGQECQTLQAHGYTPHSP*HKKRRC
Trigger: ACATCGTCTCTTCTTATGGCAAGGGCTATGTGGTGT...GTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR GCA 90 bp AGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCAGATCACCAGAGCCTTCTaGTCAGGGGTACCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: RNPSSQGHRIYGSGTRGQITRAF*SGVPSN
Trigger: ATTTGAAGGTACCCCTGAGCAGAAGGCTCTGGTGAT...CTGCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR GCA 90 bp TGTCAGGTCAGATGTCAACTTGTTGCTCCACAGCCTTTCGGCAACAGCCCCTGCGTCTGTTCAAACTCCTaGTCACAGAAGCCTACATTG +
Preference number: 4 (lower is better)
Translates to: CQVRCQLVAPQPFGNSPCVCSNS*SQKPTL
Trigger: CAATGTAGGCTTCTGTGAGCAGGAGTTTGAACAGAC...GCAGGGGCTGTTGCCGAAAGGCTGTGGAGCAACAAGTTGACATCTGACCTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR GCA 90 bp ACCTACATCCTTTCTTTCACCCTTTCCCAGTATCATTTCAGCTTTCCTCACAGTGTCCCCTGGCCAGGATaGAGTGGAAGCCTGGCTCCA +
Preference number: 4 (lower is better)
Translates to: TYILSFTLSQYHFSFPHSVPWPG*SGSLAP
Trigger: TGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGAC...ACTGTGAGGAAAGCTGAAATGATACTGGGAAAGGGTGAAAGAAAGGATGTAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp GATGGACATGGTGGCACGTGCCTATTAATTCCAGTTACTCAGGAGGCTGATGCACTAAAATGGCTGCGATaGATTACTGCCCCCGCCTCT +
Preference number: 4 (lower is better)
Translates to: DGHGGTCLLIPVTQEADALKWLR*ITAPAS
Trigger: AGAGGCGGGGGCAGTAATGCATCGCAGCCATTTTAG...TGCATCAGCCTCCTGAGTAACTGGAATTAATAGGCACGTGCCACCATGTCCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp TGGCACCTGTGCTCCCACATCCTGATATCCTACCCCTACGGCAATCCTTTGAGAGATCCTTCTCAGCCCTaGCTTCCTGAAGTTTCTGTA +
Preference number: 4 (lower is better)
Translates to: WHLCSHILISYPYGNPLRDPSQP*LPEVSV
Trigger: TACAGAAACTTCAGGAAGGCAGGGCTGAGAAGGATC...TCTCAAAGGATTGCCGTAGGGGTAGGATATCAGGATGTGGGAGCACAGGTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp CCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCAATGACAGAACCCTACTaGTTTAACTCAAGTGTATCA +
Preference number: 4 (lower is better)
Translates to: PLARMQWKPGSTTIHLQPMTEPY*FNSSVS
Trigger: TGATACACTTGAGTTAAAGCAGTAGGGTTCTGTCAT...TGGCTGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp AGAAAAATGCCACATTACTCTTTATTGAATGCGAGCGCCAGCACCGGCCCCTTTGGAAGGTACCTGGCATaGAGCCTCAGCTCCTACCAA +
Preference number: 4 (lower is better)
Translates to: RKMPHYSLLNASASTGPFGRYLA*SLSSYQ
Trigger: TTGGTAGGAGCTGAGGCTGCATGCCAGGTACCTTCC...AAAGGGGCCGGTGCTGGCGCTCGCATTCAATAAAGAGTAATGTGGCATTTTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp CCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCAATGAAGATAAAAATCTaGGAAGACAGAGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: PLARMQWKPGSTTIHLQPMKIKI*EDRADF
Trigger: GAAGTCAGCTCTGTCTTCCCAGATTTTTATCTTCAT...TGGCTGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CCA 90 bp TCCACCAATCACCAGAGCCTTCTGCTCAGGGGTACCTTCAAATGCCAGGGGTTCTTCCTCATAAAGTCCTaGATCTCTGGGTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: STNHQSLLLRGTFKCQGFFLIKS*ISGLDF
Trigger: GAAGTCCAACCCAGAGATCCAGGACTTTATGAGGAA...GAACCCCTGGCATTTGAAGGTACCCCTGAGCAGAAGGCTCTGGTGATTGGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CCA 90 bp GGCTGCGATGCATTACTGCCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTCTTAACTTGTGTATCTaGGCTATAGCCCTGGACTTG +
Preference number: 4 (lower is better)
Translates to: GCDALLPPPLAYSITSASLNLCI*AIALDL
Trigger: CAAGTCCAGGGCTATAGCCCAGATACACAAGTTAAG...AGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGGCAGTAATGCATCGCAGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp TCCAAAGTAGGAAGCTGGTTACATCCAGGTGTGACTACAGAGACAACCAACACACCTGGATCTCTGGGTTaGACTTCCTGGTCCCCAGGA +
Preference number: 4 (lower is better)
Translates to: SKVGSWLHPGVTTETTNTPGSLG*TSWSPG
Trigger: TCCTGGGGACCAGGAAGTCCAACCCAGAGATCCAGG...TGTGTTGGTTGTCTCTGTAGTCACACCTGGATGTAACCAGCTTCCTACTTTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR CCA 90 bp GAGCCTTCTGCTCAGGGGTACCTTCAAATGCCAGGGGTTCCACTATGTAGAAATACCCTTACCAGAGCCTaGGGACCAGGTTTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: EPSAQGYLQMPGVPLCRNTLTRA*GPGLCC
Trigger: ACAACACAAACCTGGTCCCCAGGCTCTGGTAAGGGT...ATTTCTACATAGTGGAACCCCTGGCATTTGAAGGTACCCCTGAGCAGAAGGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566672.5
CDS-3UTR TCA 90 bp CCTGGAACCTGTCCATTGTTACCCCAGCCCAGGGCCCAGCCAAAGAACTTAACAACTCATAGGTATTATTaGGACTGGGATTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: PGTCPLLPQPRAQPKNLTTHRYY*DWDSLV
Trigger: GACCAGTGAATCCCAGTCTCAATAATACCTATGAGT...TGTTAAGTTCTTTGGCTGGGCCCTGGGCTGGGGTAACAATGGACAGGTTCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp TCCACCAATCACCAGAGCCTTCTGCTCAGGGGTACCTTCAAATGCCAGGGGTTCACTCATAGGTATTATTaGGACTGGGATTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: STNHQSLLLRGTFKCQGFTHRYY*DWDSLV
Trigger: GACCAGTGAATCCCAGTCTCAATAATACCTATGAGT...GAACCCCTGGCATTTGAAGGTACCCCTGAGCAGAAGGCTCTGGTGATTGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR TCA 90 bp TGGATCTCTGGGTTGGACTTCCAGCAGGTGAAATCAACCTCATCTCCTCCAAGATGGACTTCCAGCAGGTaGAATCAACCTCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: WISGLDFQQVKSTSSPPRWTSSR*NQPHLL
Trigger: GAGGAGATGAGGTTGATTTCACCTGCTGGAAGTCCA...TCTTGGAGGAGATGAGGTTGATTTCACCTGCTGGAAGTCCAACCCAGAGATCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR TCA 90 bp GAGCCTTCTGCTCAGGGGTACCTTCAAATGCCAGGGGTTCCACTATGTAGAAATTGGACTTCCAGCAGGTaGAATCAACCTCATCTCCTC +
Preference number: 4 (lower is better)
Translates to: EPSAQGYLQMPGVPLCRNWTSSR*NQPHLL
Trigger: GAGGAGATGAGGTTGATTTCACCTGCTGGAAGTCCA...ATTTCTACATAGTGGAACCCCTGGCATTTGAAGGTACCCCTGAGCAGAAGGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR TCA 90 bp CCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTCTCGCCACACCTGTATaGTTGTGTCTGGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: PGVPLCRNPSSQGHRIYGLATPV*LCLAES
Trigger: AGATTCAGCCAGACACAATCATACAGGTGTGGCGAG...ACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR TCA 90 bp TGGCACCTGTGCTCCCACATCCTGATATCCTACCCCTACGGCAATCCTTTGAGATTCACAGCGGAAGTGTaGCAAACGTTCATAGGCAAA +
Preference number: 4 (lower is better)
Translates to: WHLCSHILISYPYGNPLRFTAEV*QTFIGK
Trigger: TTTGCCTATGAACGTTTGTCACACTTCCGCTGTGAA...TCTCAAAGGATTGCCGTAGGGGTAGGATATCAGGATGTGGGAGCACAGGTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp GTCTGGAAACTTCCCCACCCCCTGGTGGTGCACAGCACACAAGATGGCCTGTGTAACAGGAATAGAAAATaGCAGAACCCTACTGCTTTA +
Preference number: 4 (lower is better)
Translates to: VWKLPHPLVVHSTQDGLCNRNRK*QNPTAL
Trigger: TAAAGCAGTAGGGTTCTGTCATTTTCTATTCCTGTT...ACACAGGCCATCTTGTGTGCTGTGCACCACCAGGGGGTGGGGAAGTTTCCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp ACCTGTCCATTGTTACCCCAGCCCAGGGCCCAGCCAAAGAACTTAACAAATAACAATTTACAGCCTAGGTaGAGGGAGATGAGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: TCPLLPQPRAQPKNLTNNNLQPR*REMSWG
Trigger: GCCCCAACTCATCTCCCTTCACCTAGGCTGTAAATT...GTTATTTGTTAAGTTCTTTGGCTGGGCCCTGGGCTGGGGTAACAATGGACAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp GACTCCAAAGTAGGAAGCTGGTTACATCCAGGTGTGACTACAGAGACAACCAACGCTCTCTCTCAGGCCTaGAAGAAGGGTACTAGTCCA +
Preference number: 4 (lower is better)
Translates to: DSKVGSWLHPGVTTETTNALSQA*KKGTSP
Trigger: TGGACTAGTACCCTTCTTTCAGGCCTGAGAGAGAGC...GTTGGTTGTCTCTGTAGTCACACCTGGATGTAACCAGCTTCCTACTTTGGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR GCA 90 bp GAATGTGCTCATGAACTCATAGGTATTATTGAGACTGGGATTCACTGGTCCAAACCGTCCTGCGAACGCTaGCGCCAGCAGCAGCGAAAA +
Preference number: 4 (lower is better)
Translates to: ECAHELIGIIETGIHWSKPSCER*RQQQRK
Trigger: TTTTCGCTGCTGCTGGCGGCAGCGTTCGCAGGACGG...TTTGGACCAGTGAATCCCAGTCTCAATAATACCTATGAGTTCATGAGCACATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR GCA 90 bp AGAAAAATGCCACATTACTCTTTATTGAATGCGAGCGCCAGCACCGGCCCCTTTTTACTCTTTATTGAATaGGAGCGCCAGCACCGGCCC +
Preference number: 4 (lower is better)
Translates to: RKMPHYSLLNASASTGPFLLFIE*ERQHRP
Trigger: GGGCCGGTGCTGGCGCTCGCATTCAATAAAGAGTAA...AAAGGGGCCGGTGCTGGCGCTCGCATTCAATAAAGAGTAATGTGGCATTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp GACTCCAAAGTAGGAAGCTGGTTACATCCAGGTGTGACTACAGAGACAACCAACATCACCAGAGCCTTCTaGTCAGGGGTACGTCTGGAT +
Preference number: 4 (lower is better)
Translates to: DSKVGSWLHPGVTTETTNITRAF*SGVRLD
Trigger: ATCCAGACGTACCCCTGAGCAGAAGGCTCTGGTGAT...GTTGGTTGTCTCTGTAGTCACACCTGGATGTAACCAGCTTCCTACTTTGGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR CCA 90 bp AGTGTCAAACTCTGCAAGCACACGGATACCCCGGAGCCGTGCGTATTCAATGACTCCAAAGTAGGAAGCTaGTTACATCCAGGTGTGACT +
Preference number: 4 (lower is better)
Translates to: SVKLCKHTDTPEPCVFNDSKVGS*LHPGVT
Trigger: AGTCACACCTGGATGTAACCAGCTTCCTACTTTGGA...GTCATTGAATACGCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp AACTCCTGCTCACAGAAGCCTACATTGAGGGGTTGGGCCTGGACACCTCGCCTCACTGGTCATCATTTATaGTCAGGGTATAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: NSCSQKPTLRGWAWTPRLTGHHL*SGYNSP
Trigger: TGGAGAATTATACCCTGACCATAAATGATGACCAGT...GAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR CCA 90 bp CTCAGGGGTACCTTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCCAGGATGCTAGAGAGTaGCAGGTAATGGCGAGATGT +
Preference number: 4 (lower is better)
Translates to: LRGTFKCQGFHYVEILPVQDARE*QVMARC
Trigger: ACATCTCGCCATTACCTGCCACTCTCTAGCATCCTG...GACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAAGGTACCCCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CCA 90 bp CAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCCCCAGGACAAAGTGTaGCCAGGAGTGTCAAACTCT +
Preference number: 4 (lower is better)
Translates to: QGFHYVEILPVRAIGYTVPQDKV*PGVSNS
Trigger: AGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGG...AACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CCA 90 bp ATTGAGACTGGGATTCACTGGTCCAAAGGTGCCAGAGGGCTCAGACCCAGAGTATTCCTCATAAAGTCCTaGATCTCTGGGTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: IETGIHWSKGARGLRPRVFLIKS*ISGLDF
Trigger: GAAGTCCAACCCAGAGATCCAGGACTTTATGAGGAA...TACTCTGGGTCTGAGCCCTCTGGCACCTTTGGACCAGTGAATCCCAGTCTCAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp CATGGTGGCACGTGCCTATTAATTCCAGTTACTCAGGAGGCTGATGCACGAGAACCTGCGAAGATGCTTTaGGCTGAAAATGGTTGGGAG +
Preference number: 4 (lower is better)
Translates to: HGGTCLLIPVTQEADAREPAKML*AENGWE
Trigger: CTCCCAACCATTTTCAGCCCAAAGCATCTTCGCAGG...TTCTCGTGCATCAGCCTCCTGAGTAACTGGAATTAATAGGCACGTGCCACCATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp CTTCAGGTAAATGCTCTTATGATCAGTGGACCAAAGGAGCAACGGTGGAGGGTGCCTCCTACAAGCTTCTaGGTAATAGAGGTAAGGGGG +
Preference number: 4 (lower is better)
Translates to: LQVNALMISGPKEQRWRVPPTSF*VIEVRG
Trigger: CCCCCTTACCTCTATTACCCAGAAGCTTGTAGGAGG...CACCCTCCACCGTTGCTCCTTTGGTCCACTGATCATAAGAGCATTTACCTGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CAA 72 bp AGAGTGAATATTGCACACAAATCTTCAGAAGGCTCGTaGCACGGCCTGCTCTCTCTCAGGCCTGAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: RVNIAHKSSEGS*HGLLSLRPERR
Trigger: CCTTCTTTCAGGCCTGAGAGAGAGCAGGCCGTGCAACGAGCCTTCTGAAGATTTGTGTGCAATATTCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR TCA 90 bp CAGCTGCTTGAAGTCCTCACCGAAGCCTTTCTTCCTCATAAAGTCCTGGATCTCGGTTACATCCAGGTGTaGCTACAGAGACAACCAACA +
Preference number: 4 (lower is better)
Translates to: QLLEVLTEAFLPHKVLDLGYIQV*LQRQPT
Trigger: TGTTGGTTGTCTCTGTAGTCACACCTGGATGTAACC...GAGATCCAGGACTTTATGAGGAAGAAAGGCTTCGGTGAGGACTTCAAGCAGCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR TCA 90 bp CATGGTGGCACGTGCCTATTAATTCCAGTTACTCAGGAGGCTGATGCACGAGAATTCACTCCTTTGCTTTaGTACCCGTTAGGCCTGCTT +
Preference number: 4 (lower is better)
Translates to: HGGTCLLIPVTQEADAREFTPLL*YPLGLL
Trigger: AAGCAGGCCTAACGGGTATCAAAGCAAAGGAGTGAA...TTCTCGTGCATCAGCCTCCTGAGTAACTGGAATTAATAGGCACGTGCCACCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp ACCTTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATACTCGCCACACCTGTATaGTTGTGTCTGGCTGAATGT +
Preference number: 4 (lower is better)
Translates to: TFKCQGFHYVEILPVRAILATPV*LCLAEC
Trigger: ACATTCAGCCAGACACAATCATACAGGTGTGGCGAG...TATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569410.5
CDS-3UTR GCA 90 bp TACACCTTGATCAAGTTTAGCTTCTTGGACTCAGTACTATACAGGGATACTAGACCGTCCTGCGAACGCTaGCGCCAGCAGCAGCGAAAA +
Preference number: 4 (lower is better)
Translates to: YTLIKFSFLDSVLYRDTRPSCER*RQQQRK
Trigger: TTTTCGCTGCTGCTGGCGGCAGCGTTCGCAGGACGG...TCTAGTATCCCTGTATAGTACTGAGTCCAAGAAGCTAAACTTGATCAAGGTGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR GCA 90 bp AGAGCCTGGGGACCAGGTTTGTGTTGTCCACATATTCTCCCCACATACAAGCCTGGATCATCTACCAGATaGCAGTGGAACACGTTCAAT +
Preference number: 4 (lower is better)
Translates to: RAWGPGLCCPHILPTYKPGSSTR*QWNTFN
Trigger: ATTGAACGTGTTCCACTGGCATCTGGTAGATGATCC...AGGCTTGTATGTGGGGAGAATATGTGGACAACACAAACCTGGTCCCCAGGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR GCA 90 bp CCAGTTCCAGCTCCTTCATATAGTTCACTGGAATATCCTCTCGCCACACCTGTACTCCTTCACATCCTGTaGTGTGTAGATGTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: PVPAPSYSSLEYPLATPVLLHIL*CVDVGD
Trigger: GTCACCCACATCTACACAGCACAGGATGTGAAGGAG...TACAGGTGTGGCGAGAGGATATTCCAGTGAACTATATGAAGGAGCTGGAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR GCA 90 bp TATGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGCTCCTTCACATCCTGTaGTGTGTAGATGTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: YVEILPVRAIGYTVQVPGLLHIL*CVDVGD
Trigger: GTCACCCACATCTACACAGCACAGGATGTGAAGGAG...CCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTACATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR GCA 90 bp GAGCCTTCTGCTCAGGGGTACCTTCAAATGCCAGGGGTTCCACTATGTAGAAATAGGGGTACCTTCAAATaGCAGGGGTTCCACTATGTA +
Preference number: 4 (lower is better)
Translates to: EPSAQGYLQMPGVPLCRNRGTFK*QGFHYV
Trigger: TACATAGTGGAACCCCTGGCATTTGAAGGTACCCCT...ATTTCTACATAGTGGAACCCCTGGCATTTGAAGGTACCCCTGAGCAGAAGGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR GCA 90 bp CCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTATCACCAGAGCCTTCTaGTCAGGGGTACCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: PGVPLCRNPSSQGHRIYGITRAF*SGVPSN
Trigger: ATTTGAAGGTACCCCTGAGCAGAAGGCTCTGGTGAT...ACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR GCA 90 bp CTTCAGGTAAATGCTCTTATGATCAGTGGACCAAAGGAGCAACGGTGGAGGGTGCAGATGTCAACTTGTTaGTCCACAGCCTTTCGGCAA +
Preference number: 4 (lower is better)
Translates to: LQVNALMISGPKEQRWRVQMSTC*STAFRQ
Trigger: TTGCCGAAAGGCTGTGGAGCAACAAGTTGACATCTG...CACCCTCCACCGTTGCTCCTTTGGTCCACTGATCATAAGAGCATTTACCTGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp CACAAATCTTCAGAAGGCTCGTTGCACGGCCTGCTCTCTCTCAGGCCTGAAAGAGAGAGGAGTAAACACTaGTCATCATTTATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: HKSSEGSLHGLLSLRPERERSKH*SSFMVR
Trigger: CCTGACCATAAATGATGACCAGTGTTTACTCCTCTC...TCTTTCAGGCCTGAGAGAGAGCAGGCCGTGCAACGAGCCTTCTGAAGATTTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR CCA 90 bp GAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCAGAGAGAGGAGTAAACACTaGTCATCATTTATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: EILPVRAIGYTVQVPGGRERSKH*SSFMVR
Trigger: CCTGACCATAAATGATGACCAGTGTTTACTCCTCTC...TCTGCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CCA 90 bp AGCTCTCATATGGGAAGGAAGGATCATCTACCAGATGCCAGTGGAACACGTTCACAGGATGCTAGAGAGTaGCAGGTAATGGCGAGATGT +
Preference number: 4 (lower is better)
Translates to: SSHMGRKDHLPDASGTRSQDARE*QVMARC
Trigger: ACATCTCGCCATTACCTGCCACTCTCTAGCATCCTG...TGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR CCA 90 bp TCCCCAGGACAAAGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATACCCTTTCTCATGAGCTCTaGAAAAGTGAAGCTCTCATA +
Preference number: 4 (lower is better)
Translates to: SPGQSVARSVKLCKHTDTLSHEL*KSEALI
Trigger: TATGAGAGCTTCACTTTTCCAGAGCTCATGAGAAAG...GGTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp TTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATAGGAAAAGTCCTGGATCTCTaGGTTGGACTTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: FKCQGFHYVEILPVRAIGKVLDL*VGLPAG
Trigger: ACCTGCTGGAAGTCCAACCCAGAGATCCAGGACTTT...TCCTATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CCA 90 bp CTTCACATCCTGTGCTGTGTAGATGTGGGTGACAGGGTTGTAGGACCCCTTTCTTTCCTCATAAAGTCCTaGATCTCTGGGTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: LHILCCVDVGDRVVGPLSFLIKS*ISGLDF
Trigger: GAAGTCCAACCCAGAGATCCAGGACTTTATGAGGAA...AGAAAGGGGTCCTACAACCCTGTCACCCACATCTACACAGCACAGGATGTGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp CGCCTCTGGCTTACAGTATCACTTCTGCATCTGAAACCAGGAGGGGGCAGTCTGCATATACCAACGCCTTaGAGATATAATGCAGAAGTG +
Preference number: 4 (lower is better)
Translates to: RLWLTVSLLHLKPGGGSLHIPTP*RYNAEV
Trigger: CACTTCTGCATTATATCTCCAAGGCGTTGGTATATG...CAGACTGCCCCCTCCTGGTTTCAGATGCAGAAGTGATACTGTAAGCCAGAGGCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp ACCTGTCCATTGTTACCCCAGCCCAGGGCCCAGCCAAAGAACTTAACAAATAACTGCTCTTATGATCAGTaGACCAAAGGAGCAACGGTG +
Preference number: 4 (lower is better)
Translates to: TCPLLPQPRAQPKNLTNNCSYDQ*TKGATV
Trigger: CACCGTTGCTCCTTTGGTCCACTGATCATAAGAGCA...GTTATTTGTTAAGTTCTTTGGCTGGGCCCTGGGCTGGGGTAACAATGGACAGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp GAAGGATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATTGTACGCCATGCTGGGTTGGACTTCCTaGTCCCCAGGACAAAGTGTG +
Preference number: 4 (lower is better)
Translates to: EGSSTRCQWNTFNLLYAMLGWTS*SPGQSV
Trigger: CACACTTTGTCCTGGGGACCAGGAAGTCCAACCCAG...CATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR CCA 90 bp CAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTGTGGCTAGATGGGATTaGGTCTCTAAGGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: QGFHYVEILPVRAIGYTVVARWD*VSKGEL
Trigger: GAGTTCTCCCTTAGAGACCCAATCCCATCTAGCCAC...AACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566672.5
CDS-3UTR TCA 90 bp GAATGTGCTCATGAACTCATAGGTATTATTGAGACTGGGATTCACTGGTCCAAAGCTGCGCGGCCGAGCTaGCATCGTACTGGAATTGAA +
Preference number: 4 (lower is better)
Translates to: ECAHELIGIIETGIHWSKAARPS*HRTGIE
Trigger: TTCAATTCCAGTACGATGTCAGCTCGGCCGCGCAGC...TTTGGACCAGTGAATCCCAGTCTCAATAATACCTATGAGTTCATGAGCACATTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR TCA 90 bp GAAGGATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATTGTACGCCATGGCCGTGCGTATTCAATaGCCTCCTTCACATCCTGTG +
Preference number: 4 (lower is better)
Translates to: EGSSTRCQWNTFNLLYAMAVRIQ*PPSHPV
Trigger: CACAGGATGTGAAGGAGGTCATTGAATACGCACGGC...CATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000567411.5
CDS-3UTR TCA 90 bp GGATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATTGTACGCCATGACAGCCGTGCGTATTCAATaGCCTCCTTCACATCCTGTG +
Preference number: 4 (lower is better)
Translates to: GSSTRCQWNTFNLLYAMTAVRIQ*PPSHPV
Trigger: CACAGGATGTGAAGGAGGTCATTGAATACGCACGGC...TGTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000567411.5
CDS-3UTR TCA 90 bp TGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGACTCATAGGTATTATTaGGACTGGGATTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: CRNPSSQGHRIYGSGTRGTHRYY*DWDSLV
Trigger: GACCAGTGAATCCCAGTCTCAATAATACCTATGAGT...CCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR TCA 90 bp GGGTACCTTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCACTCATAGGTATTATTaGGACTGGGATTCACTGGTC +
Preference number: 4 (lower is better)
Translates to: GYLQMPGVPLCRNPSSQGTHRYY*DWDSLV
Trigger: GACCAGTGAATCCCAGTCTCAATAATACCTATGAGT...GCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAAGGTACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR TCA 90 bp ACCTTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATACTGGGAAGACAGAGCTaGCTTCTAAGAAGAATGTGC +
Preference number: 4 (lower is better)
Translates to: TFKCQGFHYVEILPVRAILGRQS*LLRRMC
Trigger: GCACATTCTTCTTAGAAGTCAGCTCTGTCTTCCCAG...TATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR TCA 90 bp AAGGATGGTGTTGAAGGACCGAGTTTTACTCAGATCCTTCTCAGCCCTGCCTTCATTGACCAGGGCCTCTaGGTCCTTCAAATTCAACAA +
Preference number: 4 (lower is better)
Translates to: KDGVEGPSFTQILLSPAFIDQGL*VLQIQQ
Trigger: TTGTTGAATTTGAAGGACTCAGAGGCCCTGGTCAAT...GAAGGCAGGGCTGAGAAGGATCTGAGTAAAACTCGGTCCTTCAACACCATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp GATGGACATGGTGGCACGTGCCTATTAATTCCAGTTACTCAGGAGGCTGATGCACTAGGCTGGGCTGTGTaGAAATTCCAAGAATTCTGT +
Preference number: 4 (lower is better)
Translates to: DGHGGTCLLIPVTQEADALGWAV*KFQEFC
Trigger: ACAGAATTCTTGGAATTTTCACACAGCCCAGCCTAG...TGCATCAGCCTCCTGAGTAACTGGAATTAATAGGCACGTGCCACCATGTCCATC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp ACCTTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATAAGGGGTACCTTCAAATaGCAGGGGTTCCACTATGTA +
Preference number: 4 (lower is better)
Translates to: TFKCQGFHYVEILPVRAIRGTFK*QGFHYV
Trigger: TACATAGTGGAACCCCTGGCATTTGAAGGTACCCCT...TATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR GCA 90 bp CCAGTTCCAGCTCCTTCATATAGTTCACTGGAATATCCTCTCGCCACACCTGTAAGGGGTACCTTCAAATaGCAGGGGTTCCACTATGTA +
Preference number: 4 (lower is better)
Translates to: PVPAPSYSSLEYPLATPVRGTFK*QGFHYV
Trigger: TACATAGTGGAACCCCTGGCATTTGAAGGTACCCCT...TACAGGTGTGGCGAGAGGATATTCCAGTGAACTATATGAAGGAGCTGGAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp GGCTGCGATGCATTACTGCCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTACTGGTCATCATTTATaGTCAGGGTATAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: GCDALLPPPLAYSITSASTGHHL*SGYNSP
Trigger: TGGAGAATTATACCCTGACCATAAATGATGACCAGT...AGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGGCAGTAATGCATCGCAGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp GTCCCCAGGACAAAGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATACACTGGTCATCATTTATaGTCAGGGTATAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: VPRTKCGQECQTLQAHGYTGHHL*SGYNSP
Trigger: TGGAGAATTATACCCTGACCATAAATGATGACCAGT...GTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp AGAGCCTGGGGACCAGGTTTGTGTTGTCCACATATTCTCCCCACATACAAGCCTAGTGAAGCTCTCATATaGGAAGGAAGGATCATCTAC +
Preference number: 4 (lower is better)
Translates to: RAWGPGLCCPHILPTYKPSEALI*EGRIIY
Trigger: GTAGATGATCCTTCCTTCCCATATGAGAGCTTCACT...AGGCTTGTATGTGGGGAGAATATGTGGACAACACAAACCTGGTCCCCAGGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CCA 90 bp AAGGATGGTGTTGAAGGACCGAGTTTTACTCAGATCCTTCTCAGCCCTGCCTTCTTCCTCATAAAGTCCTaGATCTCTGGGTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: KDGVEGPSFTQILLSPAFFLIKS*ISGLDF
Trigger: GAAGTCCAACCCAGAGATCCAGGACTTTATGAGGAA...GAAGGCAGGGCTGAGAAGGATCTGAGTAAAACTCGGTCCTTCAACACCATCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp GGGTACCTTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCTTCATATAGTTCACTaGAATATCCTCTCGCCACAC +
Preference number: 4 (lower is better)
Translates to: GYLQMPGVPLCRNPSSQGLHIVH*NILSPH
Trigger: GTGTGGCGAGAGGATATTCCAGTGAACTATATGAAG...GCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAAGGTACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CCA 90 bp CTTCAGGTAAATGCTCTTATGATCAGTGGACCAAAGGAGCAACGGTGGAGGGTGAATCCTCACCTAAAATaGCTGCGATGCATTACTGCC +
Preference number: 4 (lower is better)
Translates to: LQVNALMISGPKEQRWRVNPHLK*LRCITA
Trigger: GGCAGTAATGCATCGCAGCCATTTTAGGTGAGGATT...CACCCTCCACCGTTGCTCCTTTGGTCCACTGATCATAAGAGCATTTACCTGAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp AATATCCAAAGCAGGGGAACACCTACAGCTCACAGAAATAAAACTCAAATTTTTGAGGTTTGGAAGTTCTaGGGCCAGGGCCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: NIQSRGTPTAHRNKTQIFEVWKF*GQGQRA
Trigger: GGCCCTCTGGCCCTGGCCTCAGAACTTCCAAACCTC...AAAAATTTGAGTTTTATTTCTGTGAGCTGTAGGTGTTCCCCTGCTTTGGATATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR TCA 90 bp TACACCTTGATCAAGTTTAGCTTCTTGGACTCAGTACTATACAGGGATACTAGAGCTGCGCGGCCGAGCTaGCATCGTACTGGAATTGAA +
Preference number: 4 (lower is better)
Translates to: YTLIKFSFLDSVLYRDTRAARPS*HRTGIE
Trigger: TTCAATTCCAGTACGATGTCAGCTCGGCCGCGCAGC...TCTAGTATCCCTGTATAGTACTGAGTCCAAGAAGCTAAACTTGATCAAGGTGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR TCA 90 bp GAATGTGCTCATGAACTCATAGGTATTATTGAGACTGGGATTCACTGGTCCAAAAGGACTCCAGCTGCTTaGAGTCCTCACCGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: ECAHELIGIIETGIHWSKRTPAA*SPHRSL
Trigger: AAGGCTTCGGTGAGGACTTCAAGCAGCTGGAGTCCT...TTTGGACCAGTGAATCCCAGTCTCAATAATACCTATGAGTTCATGAGCACATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR TCA 90 bp CTCCTTCATATAGTTCACTGGAATATCCTCTCGCCACACCTGTATGATTGTGTCATTTATTGTACGCCATaGCATCCTCGGAGAGCTCCC +
Preference number: 4 (lower is better)
Translates to: LLHIVHWNILSPHLYDCVIYCTP*HPRRAP
Trigger: GGGAGCTCTCCGAGGATGTCATGGCGTACAATAAAT...GACACAATCATACAGGTGTGGCGAGAGGATATTCCAGTGAACTATATGAAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566672.5
CDS-3UTR GCA 90 bp TTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATAGGAGGATCATCTACCAGATaGCAGTGGAACACGTTCAAT +
Preference number: 4 (lower is better)
Translates to: FKCQGFHYVEILPVRAIGGSSTR*QWNTFN
Trigger: ATTGAACGTGTTCCACTGGCATCTGGTAGATGATCC...TCCTATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR GCA 90 bp ACCTTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATAGGATCATCTACCAGATaGCAGTGGAACACGTTCAAT +
Preference number: 4 (lower is better)
Translates to: TFKCQGFHYVEILPVRAIGSSTR*QWNTFN
Trigger: ATTGAACGTGTTCCACTGGCATCTGGTAGATGATCC...TATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR GCA 90 bp GGAAGGATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATTGTACGCCATCTCCTTCACATCCTGTaGTGTGTAGATGTGGGTGAC +
Preference number: 4 (lower is better)
Translates to: GRIIYQMPVEHVQFIVRHLLHIL*CVDVGD
Trigger: GTCACCCACATCTACACAGCACAGGATGTGAAGGAG...ATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000567411.5
CDS-3UTR GCA 90 bp TTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATAGGAACACCACATAGCCCTTaGCATAAGAAGAGACGATGT +
Preference number: 4 (lower is better)
Translates to: FKCQGFHYVEILPVRAIGTPHSP*HKKRRC
Trigger: ACATCGTCTCTTCTTATGGCAAGGGCTATGTGGTGT...TCCTATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR GCA 90 bp TTCTTCCTCATAAAGTCCTGGATCTCTGGGTTGGACTTCCAGCAGGTGAAATCAATCACCAGAGCCTTCTaGTCAGGGGTACCTTCAAAT +
Preference number: 4 (lower is better)
Translates to: FFLIKSWISGLDFQQVKSITRAF*SGVPSN
Trigger: ATTTGAAGGTACCCCTGAGCAGAAGGCTCTGGTGAT...TGATTTCACCTGCTGGAAGTCCAACCCAGAGATCCAGGACTTTATGAGGAAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR GCA 90 bp TGGCACCTGTGCTCCCACATCCTGATATCCTACCCCTACGGCAATCCTTTGAGAGACACATACTTGTCATaGCCTGTATTGATTAAGCTT +
Preference number: 4 (lower is better)
Translates to: WHLCSHILISYPYGNPLRDTYLS*PVLIKL
Trigger: AAGCTTAATCAATACAGGGCATGACAAGTATGTGTC...TCTCAAAGGATTGCCGTAGGGGTAGGATATCAGGATGTGGGAGCACAGGTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR GCA 90 bp AGCTCTCATATGGGAAGGAAGGATCATCTACCAGATGCCAGTGGAACACGTTCATCTTTGTATTCCCAGTaGCTGACACACAGCAGTCAT +
Preference number: 4 (lower is better)
Translates to: SSHMGRKDHLPDASGTRSSLYSQ*LTHSSH
Trigger: ATGACTGCTGTGTGTCAGGCACTGGGAATACAAAGA...TGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR CCA 90 bp AAGGATGGTGTTGAAGGACCGAGTTTTACTCAGATCCTTCTCAGCCCTGCCTTCGATTTCCAAACAAGCTaGCTAAAAGTCTCCAGACCT +
Preference number: 4 (lower is better)
Translates to: KDGVEGPSFTQILLSPAFDFQTS*LKVSRP
Trigger: AGGTCTGGAGACTTTTAGCCAGCTTGTTTGGAAATC...GAAGGCAGGGCTGAGAAGGATCTGAGTAAAACTCGGTCCTTCAACACCATCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp CTGGATGTAGAAGGACTCCAGCTGCTTGAAGTCCTCACCGAAGCCTTTCTTCCTCTTTCTCATGAGCTCTaGAAAAGTGAAGCTCTCATA +
Preference number: 4 (lower is better)
Translates to: LDVEGLQLLEVLTEAFLPLSHEL*KSEALI
Trigger: TATGAGAGCTTCACTTTTCCAGAGCTCATGAGAAAG...AGGAAGAAAGGCTTCGGTGAGGACTTCAAGCAGCTGGAGTCCTTCTACATCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp ATGAGCTCTGGAAAAGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGAAAAGTCCTGGATCTCTaGGTTGGACTTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: MSSGKVKLSYGKEGSSTRKVLDL*VGLPAG
Trigger: ACCTGCTGGAAGTCCAACCCAGAGATCCAGGACTTT...TCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTTCCAGAGCTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp TGGAACACGTTCAATTTATTGTACGCCATGACATCCAGAGTGTCCAGGATGCTAAAAGTCCTGGATCTCTaGGTTGGACTTCCAGCAGGT +
Preference number: 4 (lower is better)
Translates to: WNTFNLLYAMTSRVSRMLKVLDL*VGLPAG
Trigger: ACCTGCTGGAAGTCCAACCCAGAGATCCAGGACTTT...TAGCATCCTGGACACTCTGGATGTCATGGCGTACAATAAATTGAACGTGTTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR CCA 90 bp ATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATTGTACGCCATGACATCACCCTTACCAGAGCCTaGGGACCAGGTTTGTGTTGT +
Preference number: 4 (lower is better)
Translates to: IIYQMPVEHVQFIVRHDITLTRA*GPGLCC
Trigger: ACAACACAAACCTGGTCCCCAGGCTCTGGTAAGGGT...GATGTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR CCA 90 bp TCTCATGAGCTCTGGAAAAGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACGTACTAGTCCAGAGGTaGCTAGATGGGATTGGGTCT +
Preference number: 4 (lower is better)
Translates to: SHELWKSEALIWEGRIIYVLVQR*LDGIGS
Trigger: AGACCCAATCCCATCTAGCCACCTCTGGACTAGTAC...GTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTTCCAGAGCTCATGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000566672.5
3UTR CAA 72 bp AGGAGGGGGATGGAAGTCGCCTACGTTATTTTGGAATaGACCAGGGCCTCTGAGTCCTTCAAATTCAACAAT +
Preference number: 4 (lower is better)
Translates to: RRGMEVAYVILE*TRASESFKFNN
Trigger: ATTGTTGAATTTGAAGGACTCAGAGGCCCTGGTCAATTCCAAAATAACGTAGGCGACTTCCATCCCCCTCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
3UTR CAA 72 bp GCTAGGCTGGGCTGTGTGAAAATTCCAAGAATTCTGTaGGTAGAAAATGCCCACCCTGTCCTTACAGGAACA +
Preference number: 4 (lower is better)
Translates to: ARLGCVKIPRIL*VENAHPVLTGT
Trigger: TGTTCCTGTAAGGACAGGGTGGGCATTTTCTACCAACAGAATTCTTGGAATTTTCACACAGCCCAGCCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp ACCTACATCCTTTCTTTCACCCTTTCCCAGTATCATTTCAGCTTTCCTCACAGTCTCGCCACACCTGTATaGTTGTGTCTGGCTGAATCT +
Preference number: 4 (lower is better)
Translates to: TYILSFTLSQYHFSFPHSLATPV*LCLAES
Trigger: AGATTCAGCCAGACACAATCATACAGGTGTGGCGAG...ACTGTGAGGAAAGCTGAAATGATACTGGGAAAGGGTGAAAGAAAGGATGTAGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR TCA 90 bp TGGGTTGGACTTCCAGCAGGTGAAATCAACCTCATCTCCTCCAAGATGAAGATATTCACAGCGGAAGTGTaGCAAACGTTCATAGGCAAA +
Preference number: 4 (lower is better)
Translates to: WVGLPAGEINLISSKMKIFTAEV*QTFIGK
Trigger: TTTGCCTATGAACGTTTGTCACACTTCCGCTGTGAA...TATCTTCATCTTGGAGGAGATGAGGTTGATTTCACCTGCTGGAAGTCCAACCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR CCA 90 bp CCACTATGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCGAGAGGAGTAAACACTaGTCATCATTTATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: PLCRNPSSQGHRIYGSGTERSKH*SSFMVR
Trigger: CCTGACCATAAATGATGACCAGTGTTTACTCCTCTC...GGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTACATAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CCA 90 bp CTATGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGATTTCCAAACAAGCTaGCTAAAAGTCTCCAGACCT +
Preference number: 4 (lower is better)
Translates to: LCRNPSSQGHRIYGSGTRDFQTS*LKVSRP
Trigger: AGGTCTGGAGACTTTTAGCCAGCTTGTTTGGAAATC...CCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTACATAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569410.5
CDS-3UTR CCA 90 bp GGAAAAGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGATGCCAGTGGAGTGAAGCTCTCATATaGGAAGGAAGGATCATCTAC +
Preference number: 4 (lower is better)
Translates to: GKVKLSYGKEGSSTRCQWSEALI*EGRIIY
Trigger: GTAGATGATCCTTCCTTCCCATATGAGAGCTTCACT...CCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp GTATCATTTCAGCTTTCCTCACAGTCTCACTGTCCCAGAAGTCTAGGGGCAATGCTTCATATAGTTCACTaGAATATCCTCTCGCCACAC +
Preference number: 4 (lower is better)
Translates to: VSFQLSSQSHCPRSLGAMLHIVH*NILSPH
Trigger: GTGTGGCGAGAGGATATTCCAGTGAACTATATGAAG...CATTGCCCCTAGACTTCTGGGACAGTGAGACTGTGAGGAAAGCTGAAATGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp ATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATTGTACGCCATGACATCGTGGCTAGATGGGATTaGGTCTCTAAGGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: IIYQMPVEHVQFIVRHDIVARWD*VSKGEL
Trigger: GAGTTCTCCCTTAGAGACCCAATCCCATCTAGCCAC...GATGTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR CCA 90 bp ATGAGCTCTGGAAAAGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGAATACCAAAGGGCAGCTaGAGGGATATAGACGGAAGT +
Preference number: 4 (lower is better)
Translates to: MSSGKVKLSYGKEGSSTRIPKGS*RDIDGS
Trigger: ACTTCCGTCTATATCCCTCCAGCTGCCCTTTGGTAT...TCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTTCCAGAGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR CCA 90 bp CATGTTCCACATCCTGAGTCCTCCAATGTATACTGTGTTCAAACAGAATATCCAATTAGCTGGGTGCGGTaGCATGCGTCTGTAGTCCTA +
Preference number: 4 (lower is better)
Translates to: HVPHPESSNVYCVQTEYPISWVR*HASVVL
Trigger: TAGGACTACAGACGCATGCCACCGCACCCAGCTAAT...TGGATATTCTGTTTGAACACAGTATACATTGGAGGACTCAGGATGTGGAACATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR TCA 90 bp AAAAACATTCATAACTATTTTCTTGTTATCCTCGGAAATGTCTGGAAGGCAGGCACAGAGAAAGACCTGTaGGGTAAGGACGGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: KNIHNYFLVILGNVWKAGTEKDL*GKDGAK
Trigger: CTTGGCCCCGTCCTTACCTCACAGGTCTTTCTCTGT...GCCTGCCTTCCAGACATTTCCGAGGATAACAAGAAAATAGTTATGAATGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR TCA 90 bp CATGTTCCACATCCTGAGTCCTCCAATGTATACTGTGTTCAAACAGAATATCCAGCACTCCAGTCTGAATaGCAGAGAAAGACCTGTGAG +
Preference number: 4 (lower is better)
Translates to: HVPHPESSNVYCVQTEYPALQSE*QRKTCE
Trigger: CTCACAGGTCTTTCTCTGTCATTCAGACTGGAGTGC...TGGATATTCTGTTTGAACACAGTATACATTGGAGGACTCAGGATGTGGAACATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR TCA 90 bp AAAAACATTCATAACTATTTTCTTGTTATCCTCGGAAATGTCTGGAAGGCAGGCGACAAGAGGATCGCTTaGAGCCAGGGGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: KNIHNYFLVILGNVWKAGDKRIA*SQGFKT
Trigger: GGTCTTGAACCCCTGGCTTCAAGCGATCCTCTTGTC...GCCTGCCTTCCAGACATTTCCGAGGATAACAAGAAAATAGTTATGAATGTTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR GCA 90 bp ATGAGCTCTGGAAAAGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGAGGATCATCTACCAGATaGCAGTGGAACACGTTCAAT +
Preference number: 4 (lower is better)
Translates to: MSSGKVKLSYGKEGSSTRGSSTR*QWNTFN
Trigger: ATTGAACGTGTTCCACTGGCATCTGGTAGATGATCC...TCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTTCCAGAGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR GCA 90 bp AATATCCAAAGCAGGGGAACACCTACAGCTCACAGAAATAAAACTCAAATTTTTCTGGGTGCGGTGGCATaGGTCTGTAGTCCTAGCTAC +
Preference number: 4 (lower is better)
Translates to: NIQSRGTPTAHRNKTQIFLGAVA*VCSPSY
Trigger: GTAGCTAGGACTACAGACGCATGCCACCGCACCCAG...AAAAATTTGAGTTTTATTTCTGTGAGCTGTAGGTGTTCCCCTGCTTTGGATATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR CCA 90 bp CTCCTTCATATAGTTCACTGGAATATCCTCTCGCCACACCTGTATGATTGTGTCTCCAAAGTAGGAAGCTaGTTACATCCAGGTGTGACT +
Preference number: 4 (lower is better)
Translates to: LLHIVHWNILSPHLYDCVSKVGS*LHPGVT
Trigger: AGTCACACCTGGATGTAACCAGCTTCCTACTTTGGA...GACACAATCATACAGGTGTGGCGAGAGGATATTCCAGTGAACTATATGAAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp AGAAAAATGCCACATTACTCTTTATTGAATGCGAGCGCCAGCACCGGCCCCTTTTCTACCAGATGCCAGTaGAACACGTTCAATTTATTG +
Preference number: 4 (lower is better)
Translates to: RKMPHYSLLNASASTGPFSTRCQ*NTFNLL
Trigger: CAATAAATTGAACGTGTTCCACTGGCATCTGGTAGA...AAAGGGGCCGGTGCTGGCGCTCGCATTCAATAAAGAGTAATGTGGCATTTTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp CTATGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGCTTTCTCATGAGCTCTaGAAAAGTGAAGCTCTCATA +
Preference number: 4 (lower is better)
Translates to: LCRNPSSQGHRIYGSGTRLSHEL*KSEALI
Trigger: TATGAGAGCTTCACTTTTCCAGAGCTCATGAGAAAG...CCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTACATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CCA 90 bp AGTGTCCAGGATGCTAGAGAGTGGCAGGTAATGGCGAGATGTATCCAACAGCAAATGAAGATAAAAATCTaGGAAGACAGAGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: SVQDAREWQVMARCIQQQMKIKI*EDRADF
Trigger: GAAGTCAGCTCTGTCTTCCCAGATTTTTATCTTCAT...TTGCTGTTGGATACATCTCGCCATTACCTGCCACTCTCTAGCATCCTGGACACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR CCA 90 bp GAGCCTTCTGCTCAGGGGTACCTTCAAATGCCAGGGGTTCCACTATGTAGAAATATGAAGATAAAAATCTaGGAAGACAGAGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: EPSAQGYLQMPGVPLCRNMKIKI*EDRADF
Trigger: GAAGTCAGCTCTGTCTTCCCAGATTTTTATCTTCAT...ATTTCTACATAGTGGAACCCCTGGCATTTGAAGGTACCCCTGAGCAGAAGGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CCA 90 bp AGGATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATTGTACGCCATGACTTCCTCATAAAGTCCTaGATCTCTGGGTTGGACTTC +
Preference number: 4 (lower is better)
Translates to: RIIYQMPVEHVQFIVRHDFLIKS*ISGLDF
Trigger: GAAGTCCAACCCAGAGATCCAGGACTTTATGAGGAA...GTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000567411.5
CDS-3UTR CCA 90 bp GACTCCAAAGTAGGAAGCTGGTTACATCCAGGTGTGACTACAGAGACAACCAACGCCTCATTATCTCTCTaGGAAGTAAGGTTAACAATC +
Preference number: 4 (lower is better)
Translates to: DSKVGSWLHPGVTTETTNASLSL*EVRLTI
Trigger: GATTGTTAACCTTACTTCCCAGAGAGATAATGAGGC...GTTGGTTGTCTCTGTAGTCACACCTGGATGTAACCAGCTTCCTACTTTGGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR TCA 90 bp CATGTTCCACATCCTGAGTCCTCCAATGTATACTGTGTTCAAACAGAATATCCACAGCTGACTCCTGAATaGATCATGTTCCACATCCTG +
Preference number: 4 (lower is better)
Translates to: HVPHPESSNVYCVQTEYPQLTPE*IMFHIL
Trigger: CAGGATGTGGAACATGATTCATTCAGGAGTCAGCTG...TGGATATTCTGTTTGAACACAGTATACATTGGAGGACTCAGGATGTGGAACATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR GCA 90 bp AATATCCAAAGCAGGGGAACACCTACAGCTCACAGAAATAAAACTCAAATTTTTGTGAGGCGGGAAGACTaGTTGAGTCCTGGAGTTCGA +
Preference number: 4 (lower is better)
Translates to: NIQSRGTPTAHRNKTQIFVRRED*LSPGVR
Trigger: TCGAACTCCAGGACTCAAGCAGTCTTCCCGCCTCAC...AAAAATTTGAGTTTTATTTCTGTGAGCTGTAGGTGTTCCCCTGCTTTGGATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR CCA 90 bp AATATCCAAAGCAGGGGAACACCTACAGCTCACAGAAATAAAACTCAAATTTTTGCGAAAACCAAAGCCTaGAGCTTGTCATGGCCCGCT +
Preference number: 4 (lower is better)
Translates to: NIQSRGTPTAHRNKTQIFAKTKA*SLSWPA
Trigger: AGCGGGCCATGACAAGCTCCAGGCTTTGGTTTTCGC...AAAAATTTGAGTTTTATTTCTGTGAGCTGTAGGTGTTCCCCTGCTTTGGATATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR CCA 90 bp AGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGATGCCAGTGGAACACACTGGTCATCATTTATaGTCAGGGTATAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: SEALIWEGRIIYQMPVEHTGHHL*SGYNSP
Trigger: TGGAGAATTATACCCTGACCATAAATGATGACCAGT...GTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp CTATGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGACTGGTCATCATTTATaGTCAGGGTATAATTCTCCA +
Preference number: 4 (lower is better)
Translates to: LCRNPSSQGHRIYGSGTRTGHHL*SGYNSP
Trigger: TGGAGAATTATACCCTGACCATAAATGATGACCAGT...CCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTACATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CCA 90 bp TGGAAAAGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGATGCCAGTGTCTACCAGATGCCAGTaGAACACGTTCAATTTATTG +
Preference number: 4 (lower is better)
Translates to: WKSEALIWEGRIIYQMPVSTRCQ*NTFNLL
Trigger: CAATAAATTGAACGTGTTCCACTGGCATCTGGTAGA...CACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTTCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp GAAGGATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATTGTACGCCATGAGTGAAGCTCTCATATaGGAAGGAAGGATCATCTAC +
Preference number: 4 (lower is better)
Translates to: EGSSTRCQWNTFNLLYAMSEALI*EGRIIY
Trigger: GTAGATGATCCTTCCTTCCCATATGAGAGCTTCACT...CATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000567411.5
CDS-3UTR CCA 90 bp AGAAAAATGCCACATTACTCTTTATTGAATGCGAGCGCCAGCACCGGCCCCTTTATGAAGATAAAAATCTaGGAAGACAGAGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: RKMPHYSLLNASASTGPFMKIKI*EDRADF
Trigger: GAAGTCAGCTCTGTCTTCCCAGATTTTTATCTTCAT...AAAGGGGCCGGTGCTGGCGCTCGCATTCAATAAAGAGTAATGTGGCATTTTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp AGCTCTCATATGGGAAGGAAGGATCATCTACCAGATGCCAGTGGAACACGTTCAATGAAGATAAAAATCTaGGAAGACAGAGCTGACTTC +
Preference number: 4 (lower is better)
Translates to: SSHMGRKDHLPDASGTRSMKIKI*EDRADF
Trigger: GAAGTCAGCTCTGTCTTCCCAGATTTTTATCTTCAT...TGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CCA 90 bp TCTCATGAGCTCTGGAAAAGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCTTCATATAGTTCACTaGAATATCCTCTCGCCACAC +
Preference number: 4 (lower is better)
Translates to: SHELWKSEALIWEGRIIYLHIVH*NILSPH
Trigger: GTGTGGCGAGAGGATATTCCAGTGAACTATATGAAG...GTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTTCCAGAGCTCATGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR TCA 90 bp AAGCTGGTTACATCCAGGTGTGACTACAGAGACAACCAACACATTCTTCTCCAGAAGTCATGTGGAGAGTaGATATTGCACACAAATCTT +
Preference number: 4 (lower is better)
Translates to: KLVTSRCDYRDNQHILLQKSCGE*ILHTNL
Trigger: AAGATTTGTGTGCAATATTCACTCTCCACATGACTT...CTGGAGAAGAATGTGTTGGTTGTCTCTGTAGTCACACCTGGATGTAACCAGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR CCA 90 bp ACCTACATCCTTTCTTTCACCCTTTCCCAGTATCATTTCAGCTTTCCTCACAGTGAGAGGAGTAAACACTaGTCATCATTTATGGTCAGG +
Preference number: 4 (lower is better)
Translates to: TYILSFTLSQYHFSFPHSERSKH*SSFMVR
Trigger: CCTGACCATAAATGATGACCAGTGTTTACTCCTCTC...ACTGTGAGGAAAGCTGAAATGATACTGGGAAAGGGTGAAAGAAAGGATGTAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CCA 90 bp GAAGGATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATTGTACGCCATGTCTACCAGATGCCAGTaGAACACGTTCAATTTATTG +
Preference number: 4 (lower is better)
Translates to: EGSSTRCQWNTFNLLYAMSTRCQ*NTFNLL
Trigger: CAATAAATTGAACGTGTTCCACTGGCATCTGGTAGA...CATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000567411.5
CDS-3UTR CCA 90 bp CATGTTCCACATCCTGAGTCCTCCAATGTATACTGTGTTCAAACAGAATATCCAATCCTCGGAAATGTCTaGAAGGCAGGCAGAGTTAAA +
Preference number: 4 (lower is better)
Translates to: HVPHPESSNVYCVQTEYPILGNV*KAGRVK
Trigger: TTTAACTCTGCCTGCCTTCCAGACATTTCCGAGGAT...TGGATATTCTGTTTGAACACAGTATACATTGGAGGACTCAGGATGTGGAACATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR TCA 90 bp CATGTTCCACATCCTGAGTCCTCCAATGTATACTGTGTTCAAACAGAATATCCATTCTCAGCTGACTCCTaGATGAATCATGTTCCACAT +
Preference number: 4 (lower is better)
Translates to: HVPHPESSNVYCVQTEYPFSADS*MNHVPH
Trigger: ATGTGGAACATGATTCATTCAGGAGTCAGCTGAGAA...TGGATATTCTGTTTGAACACAGTATACATTGGAGGACTCAGGATGTGGAACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR TCA 90 bp AAAAACATTCATAACTATTTTCTTGTTATCCTCGGAAATGTCTGGAAGGCAGGCATTAGGCAATTAGTCTaGAGGCACAGAGTTAAGGGG +
Preference number: 4 (lower is better)
Translates to: KNIHNYFLVILGNVWKAGIRQLV*RHRVKG
Trigger: CCCCTTAACTCTGTGCCTTCAGACTAATTGCCTAAT...GCCTGCCTTCCAGACATTTCCGAGGATAACAAGAAAATAGTTATGAATGTTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR CCA 90 bp ATATGGGAAGGAAGGATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATTTCTACCAGATGCCAGTaGAACACGTTCAATTTATTG +
Preference number: 4 (lower is better)
Translates to: IWEGRIIYQMPVEHVQFISTRCQ*NTFNLL
Trigger: CAATAAATTGAACGTGTTCCACTGGCATCTGGTAGA...AATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000567411.5
3UTR CAA 72 bp AGGCTACCCACATACACCTTGATCAAGTTTAGCTTCTaGGACTCAGTACTATACAGGGATACTAGAAAAGTA +
Preference number: 4 (lower is better)
Translates to: RLPTYTLIKFSF*DSVLYRDTRKV
Trigger: TACTTTTCTAGTATCCCTGTATAGTACTGAGTCCAAGAAGCTAAACTTGATCAAGGTGTATGTGGGTAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR CCA 90 bp TACACCTTGATCAAGTTTAGCTTCTTGGACTCAGTACTATACAGGGATACTAGATTAGGTAATAAATGGTaGCTCACACCTGTAATCTCA +
Preference number: 4 (lower is better)
Translates to: YTLIKFSFLDSVLYRDTRLGNKW*LTPVIS
Trigger: TGAGATTACAGGTGTGAGCCACCATTTATTACCTAA...TCTAGTATCCCTGTATAGTACTGAGTCCAAGAAGCTAAACTTGATCAAGGTGTA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR TCA 90 bp AATATCCAAAGCAGGGGAACACCTACAGCTCACAGAAATAAAACTCAAATTTTTAAACACTTTCTCAGCTaGCTCCTGAATGAATCATGT +
Preference number: 4 (lower is better)
Translates to: NIQSRGTPTAHRNKTQIFKHFLS*LLNESC
Trigger: ACATGATTCATTCAGGAGTCAGCTGAGAAAGTGTTT...AAAAATTTGAGTTTTATTTCTGTGAGCTGTAGGTGTTCCCCTGCTTTGGATATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS GCA 90 bp GTTCTGAGGCCAGGGCCAGAGGGCCGTCGCCCGTCCTGCGAACGCTaGCGCCAGCAGCAGCGAAAACCAAAGCCTGGAGCTTGTCATGGC +
Preference number: 5 (lower is better)
Translates to: VLRPGPEGRRPSCER*RQQQRKPKPGACHG
Trigger: GCCATGACAAGCTCCAGGCTTTGGTTTTCGCTGCTGCTGGCGGCAGCGTTCGCAGGACGGGCGACGGCCCTCTGGCCCTGGCCTCAGAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 34 transcripts:
ENST00000268097.10
ENST00000563908.2
ENST00000566304.5
ENST00000566672.5
ENST00000567027.6
ENST00000567159.5
ENST00000567213.2
ENST00000567411.5
ENST00000569410.5
ENST00000682061.1
ENST00000682653.1
ENST00000682657.1
ENST00000682721.1
ENST00000682843.1
ENST00000683003.1
ENST00000683228.1
ENST00000683243.1
ENST00000683463.1
ENST00000683548.1
ENST00000683579.1
ENST00000683587.1
ENST00000683681.1
ENST00000683735.1
ENST00000683853.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684125.1
ENST00000684203.1
ENST00000684231.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
ENST00000684602.1
CDS-3UTR CAA 90 bp CCACCCCCTGGTGGTGCACAGCACACAAGATGGCCTGTGTTCCGCTCAGGGGTGGCCCGGAAGCCGGCCTaGGTGACCAGTTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PPPGGAQHTRWPVFRSGVARKPA*VTSSSS
Trigger: GGAGCTGGAACTGGTCACCAAGGCCGGCTTCCGGGC...CACCCCTGAGCGGAACACAGGCCATCTTGTGTGCTGTGCACCACCAGGGGGTGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CAA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATGCCCGGAAGCCGGCCTaGGTGACCAGTTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHARKPA*VTSSSS
Trigger: GGAGCTGGAACTGGTCACCAAGGCCGGCTTCCGGGC...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CAA 90 bp GAATGCGAGCGCCAGCACCGGCCCCTTTCTCTCCAAGCACAGGGGCACGCAGGCATGCACGAGAATCGCTaGAACCCAGGAGGCAGAGGC +
Preference number: 5 (lower is better)
Translates to: ECERQHRPLSLQAQGHAGMHENR*NPGGRG
Trigger: GCCTCTGCCTCCTGGGTTCAAGCGATTCTCGTGCAT...GCCTGCGTGCCCCTGTGCTTGGAGAGAAAGGGGCCGGTGCTGGCGCTCGCATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CAA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATACCAAAGCCTGGAGCTaGTCATGGCCCGCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHTKAWS*SWPAGL
Trigger: GAGACCAGCGGGCCATGACAAGCTCCAGGCTTTGGT...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CAA 90 bp GAATGCGAGCGCCAGCACCGGCCCCTTTCTCTCCAAGCACAGGGGCACGCAGGCTCCTGGATCTCTGGGTaGGACTTCCAGCAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: ECERQHRPLSLQAQGHAGSWISG*DFQQVK
Trigger: TTTCACCTGCTGGAAGTCCAACCCAGAGATCCAGGA...GCCTGCGTGCCCCTGTGCTTGGAGAGAAAGGGGCCGGTGCTGGCGCTCGCATTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268097.10
ENST00000567411.5
CDS-3UTR CAA 90 bp CCACCAATCACCAGAGCCTTCTGCTCAGGGGTACCTTCAAATGCCAGGGGTTCCGCCCGGAAGCCGGCCTaGGTGACCAGTTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: PPITRAFCSGVPSNARGSARKPA*VTSSSS
Trigger: GGAGCTGGAACTGGTCACCAAGGCCGGCTTCCGGGC...GGAACCCCTGGCATTTGAAGGTACCCCTGAGCAGAAGGCTCTGGTGATTGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CAA 90 bp CCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCTACATTGAGGGGTaGGGCCTGGACACCTCGCCT +
Preference number: 5 (lower is better)
Translates to: PSPGQDAVEAWLHYHSPTAYIEG*GLDTSP
Trigger: AGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGC...TGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CAA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACAAGGACTCCAGCTGCTaGAAGTCCTCACCGAAGCCT +
Preference number: 5 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHKDSSC*KSSPKP
Trigger: AGGCTTCGGTGAGGACTTCAAGCAGCTGGAGTCCTT...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CAA 90 bp TCAAACTCTGCAAGCACACGGATACCCCGGAGCCGTGCGTATTCAATGACCTCCGCCCGGAAGCCGGCCTaGGTGACCAGTTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: SNSASTRIPRSRAYSMTSARKPA*VTSSSS
Trigger: GGAGCTGGAACTGGTCACCAAGGCCGGCTTCCGGGC...GGAGGTCATTGAATACGCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CAA 90 bp GCAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCAGGGACCAGGTTTGTGTaGTCCACATATTCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: ARGSVPWPGCSGSLAPLPGTRFV*STYSPH
Trigger: GTGGGGAGAATATGTGGACAACACAAACCTGGTCCC...TGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CAA 90 bp AGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCTCACAGAAGCCTACATaGAGGGGTTGGGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: RGSVPWPGCSGSLAPLPFSQKPT*RGWAWT
Trigger: TGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGA...GAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CAA 90 bp GGTCGCACCTGTGCAGGGTCCTTGTCTGCGGACCACCCCTCCTACAAGCTTCTGAGCACAAGGCTAGGCTaGTCTACCTCCCACCAGGAC +
Preference number: 5 (lower is better)
Translates to: GRTCAGSLSADHPSYKLLSTRLG*STSHQD
Trigger: GTCCTGGTGGGAGGTAGACAAGCCTAGCCTTGTGCT...CAGAAGCTTGTAGGAGGGGTGGTCCGCAGACAAGGACCCTGCACAGGTGCGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CAA 90 bp CACACCTGCAAAGACCCTCTCCAGAGCCACCGCCCACCTCCGCGCAGCCATCCAGTGAAGGGAGATGAGTaGGGGCAACAGCGATTCTGT +
Preference number: 5 (lower is better)
Translates to: HTCKDPLQSHRPPPRSHPVKGDE*GQQRFC
Trigger: ACAGAATCGCTGTTGCCCCAACTCATCTCCCTTCAC...TGGATGGCTGCGCGGAGGTGGGCGGTGGCTCTGGAGAGGGTCTTTGCAGGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS TCA 90 bp GGAAGGCCTCGTCGAGGACTGAGCAGCCGGGCTGCGCGGCCGAGCTaGCATCGTACTGGAATTGAAAGTTGTTCGGGTAAAGGACGTAGC +
Preference number: 5 (lower is better)
Translates to: GRPRRGLSSRAARPS*HRTGIESCSGKGRS
Trigger: GCTACGTCCTTTACCCGAACAACTTTCAATTCCAGTACGATGTCAGCTCGGCCGCGCAGCCCGGCTGCTCAGTCCTCGACGAGGCCTTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 41 transcripts:
ENST00000268097.10
ENST00000563762.5
ENST00000563908.2
ENST00000566304.5
ENST00000566672.5
ENST00000567027.6
ENST00000567159.5
ENST00000567213.2
ENST00000567411.5
ENST00000568260.2
ENST00000569410.5
ENST00000682061.1
ENST00000682177.1
ENST00000682461.1
ENST00000682653.1
ENST00000682657.1
ENST00000682721.1
ENST00000682843.1
ENST00000683003.1
ENST00000683133.1
ENST00000683228.1
ENST00000683243.1
ENST00000683463.1
ENST00000683548.1
ENST00000683579.1
ENST00000683587.1
ENST00000683681.1
ENST00000683735.1
ENST00000683853.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684125.1
ENST00000684203.1
ENST00000684231.1
ENST00000684263.1
ENST00000684305.1
ENST00000684415.1
ENST00000684520.1
ENST00000684602.1
ENST00000684667.1
CDS-3UTR CAA 90 bp CCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTGAAACCAGGAGGGGGCAGACCAAAGCCTGGAGCTaGTCATGGCCCGCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: PPPLAYSITSASETRRGQTKAWS*SWPAGL
Trigger: GAGACCAGCGGGCCATGACAAGCTCCAGGCTTTGGT...CTGCCCCCTCCTGGTTTCAGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CAA 90 bp AGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCAGGCCCGGAAGCCGGCCTaGGTGACCAGTTCCAGCTCC +
Preference number: 5 (lower is better)
Translates to: RNPSSQGHRIYGSGTRGQARKPA*VTSSSS
Trigger: GGAGCTGGAACTGGTCACCAAGGCCGGCTTCCGGGC...CTGCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CAA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATGCCTGGGGACCAGGTTaGTGTTGTCCACATATTCTC +
Preference number: 5 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHAWGPG*CCPHIL
Trigger: GAGAATATGTGGACAACACAAACCTGGTCCCCAGGC...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CAA 90 bp CACACCTGCAAAGACCCTCTCCAGAGCCACCGCCCACCTCCGCGCAGCCATCCATCAGATGTCAACTTGTaGCTCCACAGCCTTTCGGCA +
Preference number: 5 (lower is better)
Translates to: HTCKDPLQSHRPPPRSHPSDVNL*LHSLSA
Trigger: TGCCGAAAGGCTGTGGAGCAACAAGTTGACATCTGA...TGGATGGCTGCGCGGAGGTGGGCGGTGGCTCTGGAGAGGGTCTTTGCAGGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CAA 90 bp CCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGAAGACAGGGTAAGCTaGGTGCGGCCAACCTGTGAG +
Preference number: 5 (lower is better)
Translates to: PSPGQDAVEAWLHYHSPTEDRVS*VRPTCE
Trigger: CTCACAGGTTGGCCGCACCAAGCTTACCCTGTCTTC...TGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566304.5
CDS CCA 90 bp GAACCCATCACAGTCTCTCCGGTTTCAGCCTCAAACTTGCGATGTTaGGCGAGCTCTCAGGCCGCTCCACACACCCCTACAGGCTTGACC +
Preference number: 5 (lower is better)
Translates to: EPITVSPVSASNLRC*ASSQAAPHTPTGLT
Trigger: GGTCAAGCCTGTAGGGGTGTGTGGAGCGGCCTGAGAGCTCGCCCAACATCGCAAGTTTGAGGCTGAAACCGGAGAGACTGTGATGGGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS-3UTR CAA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATAGGTCAGATGTCAACTaGTTGCTCCACAGCCTTTCG +
Preference number: 5 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHRSDVN*LLHSLS
Trigger: CGAAAGGCTGTGGAGCAACAAGTTGACATCTGACCT...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CAA 90 bp AGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCAGGTCAGATGTCAACTaGTTGCTCCACAGCCTTTCG +
Preference number: 5 (lower is better)
Translates to: RGSVPWPGCSGSLAPLPFRSDVN*LLHSLS
Trigger: CGAAAGGCTGTGGAGCAACAAGTTGACATCTGACCT...GAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CAA 90 bp AGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCGTCGCCTACGTTATTTaGGAATTGACCAGGGCCTCT +
Preference number: 5 (lower is better)
Translates to: RGSVPWPGCSGSLAPLPFVAYVI*ELTRAS
Trigger: AGAGGCCCTGGTCAATTCCAAAATAACGTAGGCGAC...GAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS GCA 90 bp GCCTGGAGGAAAAGGGGCATGTGCCAGATTGGGCCCTGTATTCCCTaGAAAGGTGCTGGACATCCACAGGCTGCTACCTCTTGTCTAGGC +
Preference number: 5 (lower is better)
Translates to: AWRKRGMCQIGPCIP*KGAGHPQAATSCLG
Trigger: GCCTAGACAAGAGGTAGCAGCCTGTGGATGTCCAGCACCTTTGCAGGGAATACAGGGCCCAATCTGGCACATGCCCCTTTTCCTCCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000565873.1
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS GCA 90 bp CACACTGTGAACCCATCACAGTCTCTCCGGTTTCAGCCTCAAACTTaGGATGTTGGGCGAGCTCTCAGGCCGCTCCACACACCCCTACAG +
Preference number: 5 (lower is better)
Translates to: HTVNPSQSLRFQPQT*DVGRALRPLHTPLQ
Trigger: CTGTAGGGGTGTGTGGAGCGGCCTGAGAGCTCGCCCAACATCGCAAGTTTGAGGCTGAAACCGGAGAGACTGTGATGGGTTCACAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS-3UTR CAA 90 bp TCCCCAGGACAAAGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATACCACCAAAGCCTGGAGCTaGTCATGGCCCGCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: SPGQSVARSVKLCKHTDTTKAWS*SWPAGL
Trigger: GAGACCAGCGGGCCATGACAAGCTCCAGGCTTTGGT...GGTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CAA 90 bp CCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACATCCTGGATCTCTGGGTaGGACTTCCAGCAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: PSPGQDAVEAWLHYHSPTSWISG*DFQQVK
Trigger: TTTCACCTGCTGGAAGTCCAACCCAGAGATCCAGGA...TGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CAA 90 bp TGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATACCCCGGAGCCGTGCGTATAAGGACTCCAGCTGCTaGAAGTCCTCACCGAAGCCT +
Preference number: 5 (lower is better)
Translates to: WPGVSNSASTRIPRSRAYKDSSC*KSSPKP
Trigger: AGGCTTCGGTGAGGACTTCAAGCAGCTGGAGTCCTT...ATACGCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CAA 90 bp CCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCTGGGGACCAGGTTaGTGTTGTCCACATATTCTC +
Preference number: 5 (lower is better)
Translates to: PSPGQDAVEAWLHYHSPTAWGPG*CCPHIL
Trigger: GAGAATATGTGGACAACACAAACCTGGTCCCCAGGC...TGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CAA 90 bp GTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCAGAGAGAAGGGCCCGGCCTGGGGACCAGGTTaGTGTTGTCCACATATTCTC +
Preference number: 5 (lower is better)
Translates to: VRAIGYTVQVPGGREKGPAWGPG*CCPHIL
Trigger: GAGAATATGTGGACAACACAAACCTGGTCCCCAGGC...CGGGCCCTTCTCTCTGCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS GCA 90 bp GATTGGGCCCTGTATTCCCTGCAAAGGTGCTGGACATCCACAGGCTaGTACCTCTTGTCTAGGCACCCTGGACTCACTCAGGCCAAAGGA +
Preference number: 5 (lower is better)
Translates to: DWALYSLQRCWTSTG*YLLSRHPGLTQAKG
Trigger: TCCTTTGGCCTGAGTGAGTCCAGGGTGCCTAGACAAGAGGTAGCAGCCTGTGGATGTCCAGCACCTTTGCAGGGAATACAGGGCCCAATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000565873.1
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS-3UTR CAA 90 bp CCTCCTCGGTGCCTGGGGCTCAGGTCTGTTCAAACTCCTGCTCACAGAAGCCTAGGGACCAGGTTTGTGTaGTCCACATATTCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: PPRCLGLRSVQTPAHRSLGTRFV*STYSPH
Trigger: GTGGGGAGAATATGTGGACAACACAAACCTGGTCCC...TAGGCTTCTGTGAGCAGGAGTTTGAACAGACCTGAGCCCCAGGCACCGAGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR CAA 90 bp CCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACATCAGATGTCAACTTGTaGCTCCACAGCCTTTCGGCA +
Preference number: 5 (lower is better)
Translates to: PSPGQDAVEAWLHYHSPTSDVNL*LHSLSA
Trigger: TGCCGAAAGGCTGTGGAGCAACAAGTTGACATCTGA...TGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CAA 90 bp GGTCGCACCTGTGCAGGGTCCTTGTCTGCGGACCACCCCTCCTACAAGCTTCTGTACGTTATTTTGGAATaGACCAGGGCCTCTGAGTCC +
Preference number: 5 (lower is better)
Translates to: GRTCAGSLSADHPSYKLLYVILE*TRASES
Trigger: GGACTCAGAGGCCCTGGTCAATTCCAAAATAACGTA...CAGAAGCTTGTAGGAGGGGTGGTCCGCAGACAAGGACCCTGCACAGGTGCGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CAA 90 bp CATGGTGGCACGTGCCTATTAATTCCAGTTACTCAGGAGGCTGATGCACGAGAAACCTGTGCAGGGTCCTaGTCTGCGGACCACCCCTCC +
Preference number: 5 (lower is better)
Translates to: HGGTCLLIPVTQEADARETCAGS*SADHPS
Trigger: GGAGGGGTGGTCCGCAGACAAGGACCCTGCACAGGT...TTCTCGTGCATCAGCCTCCTGAGTAACTGGAATTAATAGGCACGTGCCACCATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CAA 90 bp GCAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATCTGCCTTCATCCACTaGAGACTTAAAACTCAGTGT +
Preference number: 5 (lower is better)
Translates to: ARGSVPWPGCSGSLAPLPSAFIH*RLKTQC
Trigger: ACACTGAGTTTTAAGTCTCAAGTGGATGAAGGCAGA...TGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS TCA 90 bp GTGCTCCCTCTGTTCCCCAGCAGCAAAGTATGTCTCTGTGACTCCTaGCCATTGAGCTCACACCTCAGGACAGAGGCCAAGGAATCCAGG +
Preference number: 5 (lower is better)
Translates to: VLPLFPSSKVCLCDS*PLSSHLRTEAKESR
Trigger: CCTGGATTCCTTGGCCTCTGTCCTGAGGTGTGAGCTCAATGGTCAGGAGTCACAGAGACATACTTTGCTGCTGGGGAACAGAGGGAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682064.1
ENST00000682235.1
CDS GCA 90 bp GATACCCCGGAGCCGTGCGTATTCAATGACCTCCTTCACATCCTGTaGTGTGTAGATGTGGGTGACAGGGTTGTAGGACCCCTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: DTPEPCVFNDLLHIL*CVDVGDRVVGPLKG
Trigger: GCCTTTCAGGGGTCCTACAACCCTGTCACCCACATCTACACAGCACAGGATGTGAAGGAGGTCATTGAATACGCACGGCTCCGGGGTATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682177.1
CDS CCA 90 bp CCGGTCAGCCAGCAATGTCATGAGCACATGTGCCATGAGTCTGGCTaGAACAGCAGGAAATTGAGAAGCCTCCAGGGCTTAGGAGGTAGC +
Preference number: 5 (lower is better)
Translates to: PVSQQCHEHMCHESG*NSRKLRSLQGLGGS
Trigger: GCTACCTCCTAAGCCCTGGAGGCTTCTCAATTTCCTGCTGTTCCAGCCAGACTCATGGCACATGTGCTCATGACATTGCTGGCTGACCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CCA 90 bp CACACCCTGAACACTGAGAAGCACCAACGTGTGGGAAGCACAGTATaGCAAACAGCCCGGTCAGCCAGCAATGTCATGAGCACATGTGCC +
Preference number: 5 (lower is better)
Translates to: HTLNTEKHQRVGSTV*QTARSASNVMSTCA
Trigger: GGCACATGTGCTCATGACATTGCTGGCTGACCGGGCTGTTTGCCATACTGTGCTTCCCACACGTTGGTGCTTCTCAGTGTTCAGGGTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CCA 90 bp GGCTCCCAGAGAGTTCTACGGCTCAGCTCCACCTTCATTAAAATGTaGGTAGCAATCCCACTCTCTTCCTCTCAGAGCCTGGGGACCAGG +
Preference number: 5 (lower is better)
Translates to: GSQRVLRLSSTFIKM*VAIPLSSSQSLGTR
Trigger: CCTGGTCCCCAGGCTCTGAGAGGAAGAGAGTGGGATTGCTACCCACATTTTAATGAAGGTGGAGCTGAGCCGTAGAACTCTCTGGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683681.1
CDS-3UTR CAA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATGACATCGTACTGGAATaGAAAGTTGTTCGGGTAAAG +
Preference number: 5 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHDIVLE*KVVRVK
Trigger: CTTTACCCGAACAACTTTCAATTCCAGTACGATGTC...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CAA 90 bp GGGGCAGAGAGAAGGGCCCGGAAGCCGGCCTTGGTGACCAGTTCCAGCTCCTTCTCAATCTCAGTCTTGTaGATAAAGAATGTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: GAERRARKPALVTSSSSFSISVL*IKNVPS
Trigger: TGAGGGCACATTCTTTATCAACAAGACTGAGATTGA...GAAGGAGCTGGAACTGGTCACCAAGGCCGGCTTCCGGGCCCTTCTCTCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569410.5
CDS-3UTR CAA 90 bp GGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACTCCTCAATCTCAGTCTaGTTGATAAAGAATGTGCCC +
Preference number: 5 (lower is better)
Translates to: GLRPLARMQWKPGSTTIHSSISV*LIKNVP
Trigger: GGGCACATTCTTTATCAACAAGACTGAGATTGAGGA...GTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000268097.10
ENST00000566304.5
CDS-3UTR CAA 90 bp GCAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCAAACACGTTCAATTTATaGTACGCCATGACATCCAGA +
Preference number: 5 (lower is better)
Translates to: ARGSVPWPGCSGSLAPLPNTFNL*YAMTSR
Trigger: TCTGGATGTCATGGCGTACAATAAATTGAACGTGTT...TGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CAA 90 bp AGTGTCCAGGATGCTAGAGAGTGGCAGGTAATGGCGAGATGTATCCAACAGCAAGCCTACATTGAGGGGTaGGGCCTGGACACCTCGCCT +
Preference number: 5 (lower is better)
Translates to: SVQDAREWQVMARCIQQQAYIEG*GLDTSP
Trigger: AGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGC...TTGCTGTTGGATACATCTCGCCATTACCTGCCACTCTCTAGCATCCTGGACACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR CAA 90 bp CCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTGAAACCAGGAGGGGGCAGCCACATTACTCTTTATaGAATGCGAGCGCCAGCACC +
Preference number: 5 (lower is better)
Translates to: PPPLAYSITSASETRRGQPHYSL*NASAST
Trigger: GGTGCTGGCGCTCGCATTCAATAAAGAGTAATGTGG...CTGCCCCCTCCTGGTTTCAGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CAA 90 bp ACCCCCTGGTGGTGCACAGCACACAAGATGGCCTGTGTTCCGCTCAGGGGTGGGTGGGCGACAGAGTTTTaGAGACAGTCTCAAAAACAA +
Preference number: 5 (lower is better)
Translates to: TPWWCTAHKMACVPLRGGWATEF*RQSQKQ
Trigger: TTGTTTTTGAGACTGTCTCAAAAACTCTGTCGCCCA...CCCACCCCTGAGCGGAACACAGGCCATCTTGTGTGCTGTGCACCACCAGGGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CAA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATATTCCAAGAATTCTGTaGGTAGAAAATGCCCACCCT +
Preference number: 5 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHIPRIL*VENAHP
Trigger: AGGGTGGGCATTTTCTACCAACAGAATTCTTGGAAT...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS TCA 90 bp GACACCCAGCATTCTGGAGTTCCAGGTCCTCCCTTACCTCTAGCCTaGCTCACCATCAGCACCTGCATGAAAGGTACAAGAGGGCAGGAA +
Preference number: 5 (lower is better)
Translates to: DTQHSGVPGPPLPLA*LTISTCMKGTRGQE
Trigger: TTCCTGCCCTCTTGTACCTTTCATGCAGGTGCTGATGGTGAGTCAGGCTAGAGGTAAGGGAGGACCTGGAACTCCAGAATGCTGGGTGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563908.2
ENST00000568777.5
ENST00000684203.1
CDS TCA 90 bp CAGGTATGTGCTCCCTCTGTTCCCCAGCAGCAAAGTATGTCTCTGTaGCTCCTGACCATTGAGCTCACACCTCAGGACAGAGGCCAAGGA +
Preference number: 5 (lower is better)
Translates to: QVCAPSVPQQQSMSL*LLTIELTPQDRGQG
Trigger: TCCTTGGCCTCTGTCCTGAGGTGTGAGCTCAATGGTCAGGAGTCACAGAGACATACTTTGCTGCTGGGGAACAGAGGGAGCACATACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682064.1
ENST00000682235.1
CDS GCA 90 bp GTGACAAACGTTCATAGGCAAATGTCAGGTCAGATGTCAACTTGTTaGTCCACAGCCTTTCGGCAACAGCCCCTGCTCTGGGCCTGGAGG +
Preference number: 5 (lower is better)
Translates to: VTNVHRQMSGQMSTC*STAFRQQPLLWAWR
Trigger: CCTCCAGGCCCAGAGCAGGGGCTGTTGCCGAAAGGCTGTGGAGCAACAAGTTGACATCTGACCTGACATTTGCCTATGAACGTTTGTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000565873.1
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS GCA 90 bp GGACAAGCAGACCTTCAAGGCAAAGACCACACTCAAGGCAGAATCTaGAGGGCCATCCAAGCAGACAGGCTACAAACCCATCTCCACAGG +
Preference number: 5 (lower is better)
Translates to: GQADLQGKDHTQGRI*RAIQADRLQTHLHR
Trigger: CCTGTGGAGATGGGTTTGTAGCCTGTCTGCTTGGATGGCCCTGCAGATTCTGCCTTGAGTGTGGTCTTTGCCTTGAAGGTCTGCTTGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CCA 90 bp AGTGGGACCCAGGAGCTGCCATGTCCAAAAGTCTCCAGATGTTTCTaGGGACGGGACAAGGTTCCTGAAGAGTCCTTGCATGTGACAGGA +
Preference number: 5 (lower is better)
Translates to: SGTQELPCPKVSRCF*GRDKVPEESLHVTG
Trigger: TCCTGTCACATGCAAGGACTCTTCAGGAACCTTGTCCCGTCCCCAGAAACATCTGGAGACTTTTGGACATGGCAGCTCCTGGGTCCCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682064.1
ENST00000682235.1
CDS-3UTR CAA 90 bp CAAGGGGCTCCGTCCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCAATCTCAGTCTTGTaGATAAAGAATGTGCCCTCA +
Preference number: 5 (lower is better)
Translates to: QGAPSPGQDAVEAWLHYHSISVL*IKNVPS
Trigger: TGAGGGCACATTCTTTATCAACAAGACTGAGATTGA...ATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGGACGGAGCCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000268097.10
ENST00000566304.5
CDS-3UTR CAA 90 bp TTATTGAGACTGGGATTCACTGGTCCAAAGGTGCCAGAGGGCTCAGACCCAGAGTCACAGAAGCCTACATaGAGGGGTTGGGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: LLRLGFTGPKVPEGSDPESQKPT*RGWAWT
Trigger: TGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGA...CTCTGGGTCTGAGCCCTCTGGCACCTTTGGACCAGTGAATCCCAGTCTCAATAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR CAA 90 bp AGAAAAATGCCACATTACTCTTTATTGAATGCGAGCGCCAGCACCGGCCCCTTTCCTGGAACCTGTCCATaGTTACCCCAGCCCAGGGCC +
Preference number: 5 (lower is better)
Translates to: RKMPHYSLLNASASTGPFPGTCP*LPQPRA
Trigger: GGCCCTGGGCTGGGGTAACAATGGACAGGTTCCAGG...AAAGGGGCCGGTGCTGGCGCTCGCATTCAATAAAGAGTAATGTGGCATTTTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CAA 90 bp CTTCACATCCTGTGCTGTGTAGATGTGGGTGACAGGGTTGTAGGACCCCTTTCTTCTTCAGAAGGCTCGTaGCACGGCCTGCTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: LHILCCVDVGDRVVGPLSSSEGS*HGLLSL
Trigger: GAGAGAGAGCAGGCCGTGCAACGAGCCTTCTGAAGA...AGAAAGGGGTCCTACAACCCTGTCACCCACATCTACACAGCACAGGATGTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS TCA 90 bp ACCCTGGACTCACTCAGGCCAAAGGAAGTGATCAATACCTTGTTATaGGCCACAGCCAGGTTGGATGGCTCCCAGAGAGTTCTACGGCTC +
Preference number: 5 (lower is better)
Translates to: TLDSLRPKEVINTLL*ATARLDGSQRVLRL
Trigger: GAGCCGTAGAACTCTCTGGGAGCCATCCAACCTGGCTGTGGCTCATAACAAGGTATTGATCACTTCCTTTGGCCTGAGTGAGTCCAGGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000565873.1
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS GCA 90 bp AGTATGGCAAACAGCCCGGTCAGCCAGCAATGTCATGAGCACATGTaGCATGAGTCTGGCTGGAACAGCAGGAAATTGAGAAGCCTCCAG +
Preference number: 5 (lower is better)
Translates to: SMANSPVSQQCHEHM*HESGWNSRKLRSLQ
Trigger: CTGGAGGCTTCTCAATTTCCTGCTGTTCCAGCCAGACTCATGGCACATGTGCTCATGACATTGCTGGCTGACCGGGCTGTTTGCCATACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 90 bp TCCAGGCAGAAGGAATCCAAGCGCTCAGATCATCTCACGGAAGCCTaGTCAGACCTCTTGAGCACTACCACATGGCTGTATCTCAGCTCT +
Preference number: 5 (lower is better)
Translates to: SRQKESKRSDHLTEA*SDLLSTTTWLYLSS
Trigger: AGAGCTGAGATACAGCCATGTGGTAGTGCTCAAGAGGTCTGAGCAGGCTTCCGTGAGATGATCTGAGCGCTTGGATTCCTTCTGCCTGGA
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 90 bp GGCTTAGACACCATCATGCTTGACTCTCAGCCCAGGACTCTGCTCTaGACTAGGCTATGTCCCCCAAGTACTCAAGACCTAGCCAACGAA +
Preference number: 5 (lower is better)
Translates to: GLDTIMLDSQPRTLL*TRLCPPSTQDLANE
Trigger: TTCGTTGGCTAGGTCTTGAGTACTTGGGGGACATAGCCTAGTGCAGAGCAGAGTCCTGGGCTGAGAGTCAAGCATGATGGTGTCTAAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS GCA 90 bp TGGGCGAGCTCTCAGGCCGCTCCACACACCCCTACAGGCTTGACCTaGCTCAGCTCTCAATTAAGTATTTATGGGGTCTATCAAACCTTC +
Preference number: 5 (lower is better)
Translates to: WASSQAAPHTPTGLT*LSSQLSIYGVYQTF
Trigger: GAAGGTTTGATAGACCCCATAAATACTTAATTGAGAGCTGAGGCAGGTCAAGCCTGTAGGGGTGTGTGGAGCGGCCTGAGAGCTCGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS CCA 90 bp CAGGTCTGTTCAAACTCCTGCTCACAGAAGCCTACATTGAGGGGTTaGGCCTGGACACCTCGCCTGCAAGAGGACATGAAGAAATGGCAA +
Preference number: 5 (lower is better)
Translates to: QVCSNSCSQKPTLRG*AWTPRLQEDMKKWQ
Trigger: TTGCCATTTCTTCATGTCCTCTTGCAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGAGTTTGAACAGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS-3UTR CAA 90 bp CCCCTGGCCAGGATGCAGTGGAAGCCTGGCTCCACTACCATTCACCTACAGCCAGACATCGTACTGGAATaGAAAGTTGTTCGGGTAAAG +
Preference number: 5 (lower is better)
Translates to: PLARMQWKPGSTTIHLQPDIVLE*KVVRVK
Trigger: CTTTACCCGAACAACTTTCAATTCCAGTACGATGTC...TGGCTGTAGGTGAATGGTAGTGGAGCCAGGCTTCCACTGCATCCTGGCCAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567411.5
CDS-3UTR CAA 90 bp CCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCAGAGAGAAAGGTCAGATGTCAACTaGTTGCTCCACAGCCTTTCG +
Preference number: 5 (lower is better)
Translates to: PSSQGHRIYGSGTRGQRERSDVN*LLHSLS
Trigger: CGAAAGGCTGTGGAGCAACAAGTTGACATCTGACCT...TTCTCTCTGCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR CAA 90 bp GGCTGCGATGCATTACTGCCCCCGCCTCTGGCTTACAGTATCACTTCTGCATCTTGCTGGGACCTTAACTaGTGTATCTGGGCTATAGCC +
Preference number: 5 (lower is better)
Translates to: GCDALLPPPLAYSITSASCWDLN*CIWAIA
Trigger: GGCTATAGCCCAGATACACAAGTTAAGGTCCCAGCA...AGATGCAGAAGTGATACTGTAAGCCAGAGGCGGGGGCAGTAATGCATCGCAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CAA 90 bp ACCTGTCCATTGTTACCCCAGCCCAGGGCCCAGCCAAAGAACTTAACAAATAACTGCAGGCCACTGCAGTaGACCTGTTGGCATTCGAGG +
Preference number: 5 (lower is better)
Translates to: TCPLLPQPRAQPKNLTNNCRPLQ*TCWHSR
Trigger: CCTCGAATGCCAACAGGTCAACTGCAGTGGCCTGCA...GTTATTTGTTAAGTTCTTTGGCTGGGCCCTGGGCTGGGGTAACAATGGACAGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CAA 90 bp AGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATACCCCGGAGCCGTGCTCAATCTCAGTCTTGTaGATAAAGAACTCGGAGAGC +
Preference number: 5 (lower is better)
Translates to: SVARSVKLCKHTDTPEPCSISVL*IKNSES
Trigger: GCTCTCCGAGTTCTTTATCAACAAGACTGAGATTGA...GCACGGCTCCGGGGTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS TCA 90 bp TCTGCATATCTACCCAGGCAGCCATCCAAAAGACAGCCGAAGTCCTaGGCTTTAGTTCTAATCCTCTGGGGCTCAGCCTGCCACATAAGG +
Preference number: 5 (lower is better)
Translates to: SAYLPRQPSKRQPKS*ALVLILWGSACHIR
Trigger: CCTTATGTGGCAGGCTGAGCCCCAGAGGATTAGAACTAAAGCTCAGGACTTCGGCTGTCTTTTGGATGGCTGCCTGGGTAGATATGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 90 bp AATCCAAGCGCTCAGATCATCTCACGGAAGCCTGCTCAGACCTCTTaGGCACTACCACATGGCTGTATCTCAGCTCTTTGGTCTGCCAAG +
Preference number: 5 (lower is better)
Translates to: NPSAQIISRKPAQTS*ALPHGCISALWSAK
Trigger: CTTGGCAGACCAAAGAGCTGAGATACAGCCATGTGGTAGTGCTCAAGAGGTCTGAGCAGGCTTCCGTGAGATGATCTGAGCGCTTGGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 90 bp CTCGTTGTGCCCCTCTTCTCCTCAGTAGCTGCCCTGACCCATGTCTaGATGCTCTGGGTGACAGCTCTTCTTAACCAGGGCTCTATATTT +
Preference number: 5 (lower is better)
Translates to: LVVPLFSSVAALTHV*MLWVTALLNQGSIF
Trigger: AAATATAGAGCCCTGGTTAAGAAGAGCTGTCACCCAGAGCATTCAGACATGGGTCAGGGCAGCTACTGAGGAGAAGAGGGGCACAACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 90 bp AAGGAAAGGGAGGACATGGCATTTACCCTTGGCATAGGCAGTGCCTaGTCATCTGTTCAGCTGTCTCACTCTCGTTGTGCCCCTCTTCTC +
Preference number: 5 (lower is better)
Translates to: KEREDMAFTLGIGSA*SSVQLSHSRCAPLL
Trigger: GAGAAGAGGGGCACAACGAGAGTGAGACAGCTGAACAGATGATCAGGCACTGCCTATGCCAAGGGTAAATGCCATGTCCTCCCTTTCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 90 bp GGTAAAGGAAAGGGAGGACATGGCATTTACCCTTGGCATAGGCAGTaGCTGATCATCTGTTCAGCTGTCTCACTCTCGTTGTGCCCCTCT +
Preference number: 5 (lower is better)
Translates to: GKGKGGHGIYPWHRQ*LIICSAVSLSLCPS
Trigger: AGAGGGGCACAACGAGAGTGAGACAGCTGAACAGATGATCAGGCACTGCCTATGCCAAGGGTAAATGCCATGTCCTCCCTTTCCTTTACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CCA 90 bp ATGAAAAACAGACCAGAGGGCTGGGAAATCAGGACAGGTTGCTTCTaGTTCTGGTTTTGCTGCTGCCAAGCTGAGCAAGTCTCAGGGCTC +
Preference number: 5 (lower is better)
Translates to: MKNRPEGWEIRTGCF*FWFCCCQAEQVSGL
Trigger: GAGCCCTGAGACTTGCTCAGCTTGGCAGCAGCAAAACCAGAACCAGAAGCAACCTGTCCTGATTTCCCAGCCCTCTGGTCTGTTTTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CCA 90 bp CACCCCTACAGGCTTGACCTGCCTCAGCTCTCAATTAAGTATTTATaGGGTCTATCAAACCTTCCCATCAGGGAGGGATGGCATGGAGGG +
Preference number: 5 (lower is better)
Translates to: HPYRLDLPQLSIKYL*GLSNLPIREGWHGG
Trigger: CCCTCCATGCCATCCCTCCCTGATGGGAAGGTTTGATAGACCCCATAAATACTTAATTGAGAGCTGAGGCAGGTCAAGCCTGTAGGGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS-3UTR CAA 90 bp GAGCCTTCTGCTCAGGGGTACCTTCAAATGCCAGGGGTTCCACTATGTAGAAATAAGGACTCCAGCTGCTaGAAGTCCTCACCGAAGCCT +
Preference number: 5 (lower is better)
Translates to: EPSAQGYLQMPGVPLCRNKDSSC*KSSPKP
Trigger: AGGCTTCGGTGAGGACTTCAAGCAGCTGGAGTCCTT...ATTTCTACATAGTGGAACCCCTGGCATTTGAAGGTACCCCTGAGCAGAAGGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CAA 90 bp CTGGATGTAGAAGGACTCCAGCTGCTTGAAGTCCTCACCGAAGCCTTTCTTCCTGGGACCAGGTTTGTGTaGTCCACATATTCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: LDVEGLQLLEVLTEAFLPGTRFV*STYSPH
Trigger: GTGGGGAGAATATGTGGACAACACAAACCTGGTCCC...AGGAAGAAAGGCTTCGGTGAGGACTTCAAGCAGCTGGAGTCCTTCTACATCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CAA 90 bp TGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGGCCTGGGGACCAGGTTaGTGTTGTCCACATATTCTC +
Preference number: 5 (lower is better)
Translates to: CRNPSSQGHRIYGSGTRGAWGPG*CCPHIL
Trigger: GAGAATATGTGGACAACACAAACCTGGTCCCCAGGC...CCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTACA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CAA 90 bp AAGGATGGTGTTGAAGGACCGAGTTTTACTCAGATCCTTCTCAGCCCTGCCTTCTCACAGAAGCCTACATaGAGGGGTTGGGCCTGGACA +
Preference number: 5 (lower is better)
Translates to: KDGVEGPSFTQILLSPAFSQKPT*RGWAWT
Trigger: TGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGA...GAAGGCAGGGCTGAGAAGGATCTGAGTAAAACTCGGTCCTTCAACACCATCCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CAA 90 bp GATGGACATGGTGGCACGTGCCTATTAATTCCAGTTACTCAGGAGGCTGATGCACAAGGAGAGGAGAGGTaGAAGACTCTCCCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: DGHGGTCLLIPVTQEADAQGEER*KTLPVS
Trigger: GGAGACTGGGAGAGTCTTCAACCTCTCCTCTCCTTG...TGCATCAGCCTCCTGAGTAACTGGAATTAATAGGCACGTGCCACCATGTCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS TCA 90 bp TCCCCACACCAATACCTGCCTACATTCTGCAAAGAGGAGGGAATCTaGGGCAACTCTGGGCCAGGTCAATTCACAGCTCCATACTTGAAC +
Preference number: 5 (lower is better)
Translates to: SPHQYLPTFCKEEGI*GNSGPGQFTAPYLN
Trigger: GTTCAAGTATGGAGCTGTGAATTGACCTGGCCCAGAGTTGCCTCAGATTCCCTCCTCTTTGCAGAATGTAGGCAGGTATTGGTGTGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 90 bp AACCAAGACCCTAGCTCTAGTCCCTCAGCTCACACGCCTAGGTTGTaGGTTCCTCAACAGGAGGGACCAATCTCAGTGTCTTTGTATTCC +
Preference number: 5 (lower is better)
Translates to: NQDPSSSPSAHTPRL*VPQQEGPISVSLYS
Trigger: GGAATACAAAGACACTGAGATTGGTCCCTCCTGTTGAGGAACTCACAACCTAGGCGTGTGAGCTGAGGGACTAGAGCTAGGGTCTTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683133.1
ENST00000684305.1
CDS GCA 90 bp GTGACAAACGTTCATAGGCAAATGTCAGGTCAGATGTCAACTTGTTaGTCCACAGCCTTTCGGCAACAGCCCCTGCTCTGGGCCTTGTTA +
Preference number: 5 (lower is better)
Translates to: VTNVHRQMSGQMSTC*STAFRQQPLLWALL
Trigger: TAACAAGGCCCAGAGCAGGGGCTGTTGCCGAAAGGCTGTGGAGCAACAAGTTGACATCTGACCTGACATTTGCCTATGAACGTTTGTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000564677.5
ENST00000569116.1
ENST00000683681.1
ENST00000684041.1
CDS GCA 90 bp GGTAGCATGAAAAACAGACCAGAGGGCTGGGAAATCAGGACAGGTTaGTTCTGGTTCTGGTTTTGCTGCTGCCAAGCTGAGCAAGTCTCA +
Preference number: 5 (lower is better)
Translates to: GSMKNRPEGWEIRTG*FWFWFCCCQAEQVS
Trigger: TGAGACTTGCTCAGCTTGGCAGCAGCAAAACCAGAACCAGAAGCAACCTGTCCTGATTTCCCAGCCCTCTGGTCTGTTTTTCATGCTACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 90 bp TCCTGGGCCTTATTCATACACAGGCAACATGGGACAACAGGTATGTaGTCCCTCTGTTCCCCAGCAGCAAAGTATGTCTCTGTGACTCCT +
Preference number: 5 (lower is better)
Translates to: SWALFIHRQHGTTGM*SLCSPAAKYVSVTP
Trigger: AGGAGTCACAGAGACATACTTTGCTGCTGGGGAACAGAGGGAGCACATACCTGTTGTCCCATGTTGCCTGTGTATGAATAAGGCCCAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682064.1
ENST00000682235.1
CDS GCA 90 bp AAGTTGTTTCATTTACTAACTGGAAATGTCTGGCCCAGACCTTCCTaGCTCCCATCCTGTGCCCCAACCCAGCCTCCTTTGGTTAGCAAG +
Preference number: 5 (lower is better)
Translates to: KLFHLLTGNVWPRPS*LPSCAPTQPPLVSK
Trigger: CTTGCTAACCAAAGGAGGCTGGGTTGGGGCACAGGATGGGAGGCAGGAAGGTCTGGGCCAGACATTTCCAGTTAGTAAATGAAACAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682064.1
CDS CCA 90 bp AAGCTGAGCAAGTCTCAGGGCTCCCATTTCCTTCCCTGTAAACAATaGCAGGGTGGGACCAGATTCCAGCTACTCCTCTTCAGATCTAAG +
Preference number: 5 (lower is better)
Translates to: KLSKSQGSHFLPCKQ*QGGTRFQLLLFRSK
Trigger: CTTAGATCTGAAGAGGAGTAGCTGGAATCTGGTCCCACCCTGCCATTGTTTACAGGGAAGGAAATGGGAGCCCTGAGACTTGCTCAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CCA 90 bp ACACCACATAGCCCTTGCCATAAGAAGAGACGATGTCCAGCAGCCTaGAGAGGAGAGGAGTGTCTAGTAAGTGTCTGCTTAGCTCAGATG +
Preference number: 5 (lower is better)
Translates to: TPHSPCHKKRRCPAA*RGEECLVSVCLAQM
Trigger: CATCTGAGCTAAGCAGACACTTACTAGACACTCCTCTCCTCTCCAGGCTGCTGGACATCGTCTCTTCTTATGGCAAGGGCTATGTGGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682653.1
CDS CCA 90 bp TGTTCAAACTCCTGCTCACAGAAGCCTACATTGAGGGGTTGGGCCTaGACACCTCGCCTGCAAGAGGACATGAAGAAATGGCAAGATAAG +
Preference number: 5 (lower is better)
Translates to: CSNSCSQKPTLRGWA*TPRLQEDMKKWQDK
Trigger: CTTATCTTGCCATTTCTTCATGTCCTCTTGCAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGAGTTTGAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CCA 90 bp GTATTTATGGGGTCTATCAAACCTTCCCATCAGGGAGGGATGGCATaGAGGGAAGGCCCAGCACACTTCTACTTTTCCCAGAACACATCC +
Preference number: 5 (lower is better)
Translates to: VFMGSIKPSHQGGMA*REGPAHFYFSQNTS
Trigger: GGATGTGTTCTGGGAAAAGTAGAAGTGTGCTGGGCCTTCCCTCCATGCCATCCCTCCCTGATGGGAAGGTTTGATAGACCCCATAAATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS-3UTR CAA 90 bp AGGATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATTGTACGCCATGACACCAAAGCCTGGAGCTaGTCATGGCCCGCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: RIIYQMPVEHVQFIVRHDTKAWS*SWPAGL
Trigger: GAGACCAGCGGGCCATGACAAGCTCCAGGCTTTGGT...GTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR CAA 90 bp GTGGCAGGTAATGGCGAGATGTATCCAACAGCAAGCCCCGGTGAGGAAAGCGGGAACACGTTCAATTTATaGTACGCCATGACATCCAGA +
Preference number: 5 (lower is better)
Translates to: VAGNGEMYPTASPGEESGNTFNL*YAMTSR
Trigger: TCTGGATGTCATGGCGTACAATAAATTGAACGTGTT...CCCGCTTTCCTCACCGGGGCTTGCTGTTGGATACATCTCGCCATTACCTGCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR CAA 90 bp GTATCATTTCAGCTTTCCTCACAGTCTCACTGTCCCAGAAGTCTAGGGGCAATGAAGGACTCCAGCTGCTaGAAGTCCTCACCGAAGCCT +
Preference number: 5 (lower is better)
Translates to: VSFQLSSQSHCPRSLGAMKDSSC*KSSPKP
Trigger: AGGCTTCGGTGAGGACTTCAAGCAGCTGGAGTCCTT...CATTGCCCCTAGACTTCTGGGACAGTGAGACTGTGAGGAAAGCTGAAATGATAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CAA 90 bp AGGGGTACCTTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGGGACCAGGTTTGTGTaGTCCACATATTCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: RGTFKCQGFHYVEILPVRGTRFV*STYSPH
Trigger: GTGGGGAGAATATGTGGACAACACAAACCTGGTCCC...CCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAAGGTACCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS TCA 90 bp GCCATCAATCTCATGGTGAAGAATCCCTGTCCGAAGTTCTCTCAGTaGCTCATCTGGGTTTGGGCTGAAAGAAGTAGATACGGGGGCATG +
Preference number: 5 (lower is better)
Translates to: AINLMVKNPCPKFSQ*LIWVWAERSRYGGM
Trigger: CATGCCCCCGTATCTACTTCTTTCAGCCCAAACCCAGATGAGTCACTGAGAGAACTTCGGACAGGGATTCTTCACCATGAGATTGATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 90 bp CAGGCTACAAACCCATCTCCACAGGAGACTCTACAGGGAGACCAATaGGGACTTAACCTAGGAGCAAGGGTGAGGAAAAACTATACCCCA +
Preference number: 5 (lower is better)
Translates to: QATNPSPQETLQGDQ*GLNLGARVRKNYTP
Trigger: TGGGGTATAGTTTTTCCTCACCCTTGCTCCTAGGTTAAGTCCTCATTGGTCTCCCTGTAGAGTCTCCTGTGGAGATGGGTTTGTAGCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 90 bp CCCACACATCATGGAGCCCCAATATCATTGTGTGGAGAATTCATCTaGATATCTACCCAGGCAGCCATCCAAAAGACAGCCGAAGTCCTG +
Preference number: 5 (lower is better)
Translates to: PTHHGAPISLCGEFI*ISTQAAIQKTAEVL
Trigger: CAGGACTTCGGCTGTCTTTTGGATGGCTGCCTGGGTAGATATGCAGATGAATTCTCCACACAATGATATTGGGGCTCCATGATGTGTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 90 bp TTCTTTCCCTTACCAGTAAATACCCTGGATCCCCACACCAATACCTaGCTACATTCTGCAAAGAGGAGGGAATCTGAGGCAACTCTGGGC +
Preference number: 5 (lower is better)
Translates to: FFPLPVNTLDPHTNT*LHSAKRRESEATLG
Trigger: GCCCAGAGTTGCCTCAGATTCCCTCCTCTTTGCAGAATGTAGGCAGGTATTGGTGTGGGGATCCAGGGTATTTACTGGTAAGGGAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 90 bp GCCAATGCTCTTGGTCTACTTAGCCCTCTGTTCCTGACTCTAAAATaGTGTAAATATGGTGGCACTGGGGGACTTAGGTGCTGTCCTGTC +
Preference number: 5 (lower is better)
Translates to: ANALGLLSPLFLTLK*CKYGGTGGLRCCPV
Trigger: GACAGGACAGCACCTAAGTCCCCCAGTGCCACCATATTTACAGCATTTTAGAGTCAGGAACAGAGGGCTAAGTAGACCAAGAGCATTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS-3UTR CAA 90 bp GATACCTGGTCCCCAGGACAAAGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACGACATCGTACTGGAATaGAAAGTTGTTCGGGTAAAG +
Preference number: 5 (lower is better)
Translates to: DTWSPGQSVARSVKLCKHDIVLE*KVVRVK
Trigger: CTTTACCCGAACAACTTTCAATTCCAGTACGATGTC...GTGCTTGCAGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGGACCAGGTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CAA 90 bp CAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTTCCTGGATCTCTGGGTaGGACTTCCAGCAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: QGFHYVEILPVRAIGYTVSWISG*DFQQVK
Trigger: TTTCACCTGCTGGAAGTCCAACCCAGAGATCCAGGA...AACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CAA 90 bp AGAAAAATGCCACATTACTCTTTATTGAATGCGAGCGCCAGCACCGGCCCCTTTGGGACCAGGTTTGTGTaGTCCACATATTCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: RKMPHYSLLNASASTGPFGTRFV*STYSPH
Trigger: GTGGGGAGAATATGTGGACAACACAAACCTGGTCCC...AAAGGGGCCGGTGCTGGCGCTCGCATTCAATAAAGAGTAATGTGGCATTTTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CAA 90 bp CATGTGGAGAGTGAATATTGCACACAAATCTTCAGAAGGCTCGTTGCACGGCCTGCCTGGGGACCAGGTTaGTGTTGTCCACATATTCTC +
Preference number: 5 (lower is better)
Translates to: HVESEYCTQIFRRLVARPAWGPG*CCPHIL
Trigger: GAGAATATGTGGACAACACAAACCTGGTCCCCAGGC...AGGCCGTGCAACGAGCCTTCTGAAGATTTGTGTGCAATATTCACTCTCCACATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR CAA 90 bp GGACCCCTTTCTCATGAGCTCTGGAAAAGTGAAGCTCTCATATGGGAAGGAAGGTCAGATGTCAACTTGTaGCTCCACAGCCTTTCGGCA +
Preference number: 5 (lower is better)
Translates to: GPLSHELWKSEALIWEGRSDVNL*LHSLSA
Trigger: TGCCGAAAGGCTGTGGAGCAACAAGTTGACATCTGA...CCTTCCTTCCCATATGAGAGCTTCACTTTTCCAGAGCTCATGAGAAAGGGGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR CAA 90 bp TCCACCAATCACCAGAGCCTTCTGCTCAGGGGTACCTTCAAATGCCAGGGGTTCAACACGTTCAATTTATaGTACGCCATGACATCCTCG +
Preference number: 5 (lower is better)
Translates to: STNHQSLLLRGTFKCQGFNTFNL*YAMTSS
Trigger: CGAGGATGTCATGGCGTACAATAAATTGAACGTGTT...GAACCCCTGGCATTTGAAGGTACCCCTGAGCAGAAGGCTCTGGTGATTGGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566672.5
CDS-3UTR CAA 90 bp GTCCCCAGGACAAAGTGTGGCCAGGAGTGTCAAACTCTGCAAGCACACGGATACTCCTCAATCTCAGTCTaGTTGATAAAGAACTCGGAG +
Preference number: 5 (lower is better)
Translates to: VPRTKCGQECQTLQAHGYSSISV*LIKNSE
Trigger: CTCCGAGTTCTTTATCAACAAGACTGAGATTGAGGA...GTATCCGTGTGCTTGCAGAGTTTGACACTCCTGGCCACACTTTGTCCTGGGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS TCA 90 bp GAGGCAGCATGCTGTTGCTCCAAGCATAGAAGTGGAGCAAGGGAATaGAGACAAACTAAAGCAAGGTGTGGAATTCCGAGAGAGTTTCCC +
Preference number: 5 (lower is better)
Translates to: EAACCCSKHRSGARE*RQTKARCGIPREFP
Trigger: GGGAAACTCTCTCGGAATTCCACACCTTGCTTTAGTTTGTCTTCATTCCCTTGCTCCACTTCTATGCTTGGAGCAACAGCATGCTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563908.2
ENST00000568777.5
ENST00000684203.1
CDS TCA 90 bp AGGAGGGCTGCAGCTACTGTGGTAGCCTGGAATCTTCCAAAAGCCTaGAGATCAATACTTCCTCTTGCCATTTGTGTTCGGTTGTCTGAC +
Preference number: 5 (lower is better)
Translates to: RRAAATVVAWNLPKA*RSILPLAICVRLSD
Trigger: GTCAGACAACCGAACACAAATGGCAAGAGGAAGTATTGATCTTCAGGCTTTTGGAAGATTCCAGGCTACCACAGTAGCTGCAGCCCTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS GCA 90 bp GGCAAAGGTGTCATGACATCCTGTAAGTCAGCCTGGTTCAAATCCTaGTTCTTAGTGACTTTGGGCAAGGTCCTGAACTCTGTGCTTCAG +
Preference number: 5 (lower is better)
Translates to: GKGVMTSCKSAWFKS*FLVTLGKVLNSVLQ
Trigger: CTGAAGCACAGAGTTCAGGACCTTGCCCAAAGTCACTAAGAAGCAGGATTTGAACCAGGCTGACTTACAGGATGTCATGACACCTTTGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS GCA 90 bp CTGACTCTAAAATGCTGTAAATATGGTGGCACTGGGGGACTTAGGTaGTGTCCTGTCCATGAACATGGATGCGAAATCCTGTCCTTGGGT +
Preference number: 5 (lower is better)
Translates to: LTLKCCKYGGTGGLR*CPVHEHGCEILSLG
Trigger: ACCCAAGGACAGGATTTCGCATCCATGTTCATGGACAGGACAGCACCTAAGTCCCCCAGTGCCACCATATTTACAGCATTTTAGAGTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CCA 90 bp GAGCCATATTCATCCCACTGGCATCACAACATCCATGACTTCTTATaGCACTACAATGTCAGGGATAGGATGGCCTGGCAGAAGGCAATG +
Preference number: 5 (lower is better)
Translates to: EPYSSHWHHNIHDFL*HYNVRDRMAWQKAM
Trigger: CATTGCCTTCTGCCAGGCCATCCTATCCCTGACATTGTAGTGCCATAAGAAGTCATGGATGTTGTGATGCCAGTGGGATGAATATGGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CCA 90 bp ATCCCTGACAGAGGCAAAGGTGTCATGACATCCTGTAAGTCAGCCTaGTTCAAATCCTGCTTCTTAGTGACTTTGGGCAAGGTCCTGAAC +
Preference number: 5 (lower is better)
Translates to: IPDRGKGVMTSCKSA*FKSCFLVTLGKVLN
Trigger: GTTCAGGACCTTGCCCAAAGTCACTAAGAAGCAGGATTTGAACCAGGCTGACTTACAGGATGTCATGACACCTTTGCCTCTGTCAGGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CCA 90 bp TTAGGTGCTGTCCTGTCCATGAACATGGATGCGAAATCCTGTCCTTaGGTCTCAGTCTATAACCTGACCAATCTCCTTAGGGGACCTCTA +
Preference number: 5 (lower is better)
Translates to: LGAVLSMNMDAKSCP*VSVYNLTNLLRGPL
Trigger: TAGAGGTCCCCTAAGGAGATTGGTCAGGTTATAGACTGAGACCCAAGGACAGGATTTCGCATCCATGTTCATGGACAGGACAGCACCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS-3UTR CAA 90 bp GTAGAAATCCTTCCAGTCAGGGCCATAGGATATACGGTTCAGGTACCAGGGGGCGACATCGTACTGGAATaGAAAGTTGTTCGGGTAAAG +
Preference number: 5 (lower is better)
Translates to: VEILPVRAIGYTVQVPGGDIVLE*KVVRVK
Trigger: CTTTACCCGAACAACTTTCAATTCCAGTACGATGTC...GCCCCCTGGTACCTGAACCGTATATCCTATGGCCCTGACTGGAAGGATTTCTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000566672.5
ENST00000567411.5
ENST00000569410.5
CDS-3UTR CAA 90 bp CCTGGAACCTGTCCATTGTTACCCCAGCCCAGGGCCCAGCCAAAGAACTTAACAAACACGTTCAATTTATaGTACGCCATGACATCCAGA +
Preference number: 5 (lower is better)
Translates to: PGTCPLLPQPRAQPKNLTNTFNL*YAMTSR
Trigger: TCTGGATGTCATGGCGTACAATAAATTGAACGTGTT...TGTTAAGTTCTTTGGCTGGGCCCTGGGCTGGGGTAACAATGGACAGGTTCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CAA 90 bp CAGTGGAACACGTTCAATTTATTGTACGCCATGACATCCAGAGTGTCCAGGATGTCCTGGATCTCTGGGTaGGACTTCCAGCAGGTGAAA +
Preference number: 5 (lower is better)
Translates to: QWNTFNLLYAMTSRVSRMSWISG*DFQQVK
Trigger: TTTCACCTGCTGGAAGTCCAACCCAGAGATCCAGGA...CATCCTGGACACTCTGGATGTCATGGCGTACAATAAATTGAACGTGTTCCACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567411.5
CDS-3UTR CAA 90 bp AAAAGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGATGCCAGTGGAAAAGGACTCCAGCTGCTaGAAGTCCTCACCGAAGCCT +
Preference number: 5 (lower is better)
Translates to: KSEALIWEGRIIYQMPVEKDSSC*KSSPKP
Trigger: AGGCTTCGGTGAGGACTTCAAGCAGCTGGAGTCCTT...TTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563762.5
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CAA 90 bp CATGGTGGCACGTGCCTATTAATTCCAGTTACTCAGGAGGCTGATGCACGAGAAATTCACTCCTTTGCTTaGATACCCGTTAGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: HGGTCLLIPVTQEADAREIHSFA*IPVRPA
Trigger: AGCAGGCCTAACGGGTATCAAAGCAAAGGAGTGAAT...TTCTCGTGCATCAGCCTCCTGAGTAACTGGAATTAATAGGCACGTGCCACCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS TCA 90 bp CAACACTTTTCACACCAGTCAACAGTCTCTCCTTCCCCATTTCGGTaGCTCTCAAACTGTCACTGTACACCAAATGCACCTGGGAATCTC +
Preference number: 5 (lower is better)
Translates to: QHFSHQSTVSPSPFR*LSNCHCTPNAPGNL
Trigger: GAGATTCCCAGGTGCATTTGGTGTACAGTGACAGTTTGAGAGTCACCGAAATGGGGAAGGAGAGACTGTTGACTGGTGTGAAAAGTGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CCA 90 bp GGTCTTGAGCAACTCACCTATGTTCTCCAGGCCTCATTATCTCTCTaGGAAGTAAGGTTAACAATCCCTATCCCACATACCAAAGGGCAG +
Preference number: 5 (lower is better)
Translates to: GLEQLTYVLQASLSL*EVRLTIPIPHTKGQ
Trigger: CTGCCCTTTGGTATGTGGGATAGGGATTGTTAACCTTACTTCCCAGAGAGATAATGAGGCCTGGAGAACATAGGTGAGTTGCTCAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS CCA 90 bp AACAGCAGAGGGAAGCCTTATTACAGGAATCATGGATGCTTGTGCTaGGTCTTGAGCAACTCACCTATGTTCTCCAGGCCTCATTATCTC +
Preference number: 5 (lower is better)
Translates to: NSRGKPYYRNHGCLC*VLSNSPMFSRPHYL
Trigger: GAGATAATGAGGCCTGGAGAACATAGGTGAGTTGCTCAAGACCCAGCACAAGCATCCATGATTCCTGTAATAAGGCTTCCCTCTGCTGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS CCA 90 bp ATTAAGTATTTATGGGGTCTATCAAACCTTCCCATCAGGGAGGGATaGCATGGAGGGAAGGCCCAGCACACTTCTACTTTTCCCAGAACA +
Preference number: 5 (lower is better)
Translates to: IKYLWGLSNLPIREG*HGGKAQHTSTFPRT
Trigger: TGTTCTGGGAAAAGTAGAAGTGTGCTGGGCCTTCCCTCCATGCCATCCCTCCCTGATGGGAAGGTTTGATAGACCCCATAAATACTTAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS-3UTR CAA 90 bp TACACCTTGATCAAGTTTAGCTTCTTGGACTCAGTACTATACAGGGATACTAGAACCAAAGCCTGGAGCTaGTCATGGCCCGCTGGTCTC +
Preference number: 5 (lower is better)
Translates to: YTLIKFSFLDSVLYRDTRTKAWS*SWPAGL
Trigger: GAGACCAGCGGGCCATGACAAGCTCCAGGCTTTGGT...TCTAGTATCCCTGTATAGTACTGAGTCCAAGAAGCTAAACTTGATCAAGGTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS-3UTR CAA 90 bp GGATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATTGTACGCCATGACAGGGACCAGGTTTGTGTaGTCCACATATTCTCCCCAC +
Preference number: 5 (lower is better)
Translates to: GSSTRCQWNTFNLLYAMTGTRFV*STYSPH
Trigger: GTGGGGAGAATATGTGGACAACACAAACCTGGTCCC...TGTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000567411.5
CDS-3UTR CAA 90 bp AACACGTTCAATTTATTGTACGCCATGACATCCTCGGAGAGCTCCCCAGACAGTCCAATCTCAGTGTCTTaGTATTCCCAGTGCCTGACA +
Preference number: 5 (lower is better)
Translates to: NTFNLLYAMTSSESSPDSPISVS*YSQCLT
Trigger: TGTCAGGCACTGGGAATACAAAGACACTGAGATTGG...ACTGTCTGGGGAGCTCTCCGAGGATGTCATGGCGTACAATAAATTGAACGTGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS TCA 90 bp TTCAAAGTGAAAGAATCCATGAGACCTCAGCAGTCACTCAGCACCTaGTTTGAGCAGACTGCTAGTGTACTGTTTTGGCTTCTCCCCACT +
Preference number: 5 (lower is better)
Translates to: FKVKESMRPQQSLST*FEQTASVLFWLLPT
Trigger: AGTGGGGAGAAGCCAAAACAGTACACTAGCAGTCTGCTCAAATCAGGTGCTGAGTGACTGCTGAGGTCTCATGGATTCTTTCACTTTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563908.2
ENST00000568777.5
ENST00000684203.1
CDS TCA 90 bp CTGTACCAAACAAACAACTCCATGACCTCAACAACTGCTTCTGAATaGAAGGCAGCTCTAGAGCACTGCTACTCCAAGTATGGTCTGCAG +
Preference number: 5 (lower is better)
Translates to: LYQTNNSMTSTTASE*KAALEHCYSKYGLQ
Trigger: CTGCAGACCATACTTGGAGTAGCAGTGCTCTAGAGCTGCCTTTCATTCAGAAGCAGTTGTTGAGGTCATGGAGTTGTTTGTTTGGTACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 90 bp TGGCCTGTACCAAACAAACAACTCCATGACCTCAACAACTGCTTCTaGATGAAAGGCAGCTCTAGAGCACTGCTACTCCAAGTATGGTCT +
Preference number: 5 (lower is better)
Translates to: WPVPNKQLHDLNNCF*MKGSSRALLLQVWS
Trigger: AGACCATACTTGGAGTAGCAGTGCTCTAGAGCTGCCTTTCATTCAGAAGCAGTTGTTGAGGTCATGGAGTTGTTTGTTTGGTACAGGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 90 bp GAAAACAGCAGAGGGAAGCCTTATTACAGGAATCATGGATGCTTGTaGTGGGTCTTGAGCAACTCACCTATGTTCTCCAGGCCTCATTAT +
Preference number: 5 (lower is better)
Translates to: ENSRGKPYYRNHGCL*WVLSNSPMFSRPHY
Trigger: ATAATGAGGCCTGGAGAACATAGGTGAGTTGCTCAAGACCCAGCACAAGCATCCATGATTCCTGTAATAAGGCTTCCCTCTGCTGTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 17 transcripts:
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS-3UTR CAA 90 bp ATAGCCCTTGCCATAAGAAGAGACGATGTCCAGCAGCGTCTGGATGTAGAAGGAGACATCGTACTGGAATaGAAAGTTGTTCGGGTAAAG +
Preference number: 5 (lower is better)
Translates to: IALAIRRDDVQQRLDVEGDIVLE*KVVRVK
Trigger: CTTTACCCGAACAACTTTCAATTCCAGTACGATGTC...TCCTTCTACATCCAGACGCTGCTGGACATCGTCTCTTCTTATGGCAAGGGCTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000566672.5
ENST00000567411.5
CDS-3UTR CAA 90 bp CATATGGGAAGGAAGGATCATCTACCAGATGCCAGTGGAACACGTTCAATTTATGCCTGGGGACCAGGTTaGTGTTGTCCACATATTCTC +
Preference number: 5 (lower is better)
Translates to: HMGRKDHLPDASGTRSIYAWGPG*CCPHIL
Trigger: GAGAATATGTGGACAACACAAACCTGGTCCCCAGGC...ATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000567411.5
CDS TCA 90 bp ATCACCAAAGTCCTACTGTTGAACCTTCTCCAGACTCCAGTACTATaGCCCCTCCATTTCCCTTCTGTTCTCAGTCTTCTCTCATTCTTG +
Preference number: 5 (lower is better)
Translates to: ITKVLLLNLLQTPVL*PLHFPSVLSLLSFL
Trigger: CAAGAATGAGAGAAGACTGAGAACAGAAGGGAAATGGAGGGGTCATAGTACTGGAGTCTGGAGAAGGTTCAACAGTAGGACTTTGGTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 90 bp TTTATGGTCAGGGTATCTCATGGGTCAGTTTCCACAGCAGAAAGATaGAAGAAGTCTTCTCCTGGCAAAGGGAACAGGGATGCAATTCTC +
Preference number: 5 (lower is better)
Translates to: FMVRVSHGSVSTAER*KKSSPGKGNRDAIL
Trigger: GAGAATTGCATCCCTGTTCCCTTTGCCAGGAGAAGACTTCTTTCATCTTTCTGCTGTGGAAACTGACCCATGAGATACCCTGACCATAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000568260.2
ENST00000682061.1
ENST00000684667.1
CDS TCA 90 bp GGAGAAGGTAACCTTGGTCCCACAGACCCAGAAGACCCTCATCTATaGTTTAGGAAGAAAAATCCAGCCTATCCAAGTAACCTAACAGCA +
Preference number: 5 (lower is better)
Translates to: GEGNLGPTDPEDPHL*FRKKNPAYPSNLTA
Trigger: TGCTGTTAGGTTACTTGGATAGGCTGGATTTTTCTTCCTAAATCATAGATGAGGGTCTTCTGGGTCTGTGGGACCAAGGTTACCTTCTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000682064.1
CDS TCA 90 bp AATTTATTGTACGCCATGACATCCTGTAGGTTAAAGTGCACACTGTaGACCCATCACAGTCTCTCCGGTTTCAGCCTCAAACTTGCGATG +
Preference number: 5 (lower is better)
Translates to: NLLYAMTSCRLKCTL*THHSLSGFSLKLAM
Trigger: CATCGCAAGTTTGAGGCTGAAACCGGAGAGACTGTGATGGGTTCACAGTGTGCACTTTAACCTACAGGATGTCATGGCGTACAATAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS CCA 90 bp GAGAGAGTTTCCCACATCATTCACCAGCAGAGGGTTTACCAAAAGTaGGAGAGATATTTGGCTAAGTCTGTATCTAGGCACCAAATGCCT +
Preference number: 5 (lower is better)
Translates to: ERVSHIIHQQRVYQK*ERYLAKSVSRHQMP
Trigger: AGGCATTTGGTGCCTAGATACAGACTTAGCCAAATATCTCTCCCACTTTTGGTAAACCCTCTGCTGGTGAATGATGTGGGAAACTCTCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563908.2
ENST00000568777.5
ENST00000684203.1
CDS CCA 90 bp GCCAATACTCCCAACGATCTGTCTCTTTTCTTCTGTCACAACCAATaGGCAAAACTTTCAACCCTGGATCAATCTAACATCTGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: ANTPNDLSLFFCHNQ*AKLSTLDQSNICLL
Trigger: CAGCAGGCAGATGTTAGATTGATCCAGGGTTGAAAGTTTTGCCCATTGGTTGTGACAGAAGAAAAGAGACAGATCGTTGGGAGTATTGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CCA 90 bp GTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGATGCCAGTaGAACACGTTCAATTTATTGTACGCCATGACATCCTGTGAGGTA +
Preference number: 5 (lower is better)
Translates to: VKLSYGKEGSSTRCQ*NTFNLLYAMTSCEV
Trigger: TACCTCACAGGATGTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682657.1
CDS-3UTR CAA 90 bp ATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAGGGCCATAGGATATACTCCTCAATCTCAGTCTaGTTGATAAAGAATGTGCCC +
Preference number: 5 (lower is better)
Translates to: MPGVPLCRNPSSQGHRIYSSISV*LIKNVP
Trigger: GGGCACATTCTTTATCAACAAGACTGAGATTGAGGA...GTATATCCTATGGCCCTGACTGGAAGGATTTCTACATAGTGGAACCCCTGGCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569410.5
CDS-3UTR CAA 90 bp CTCAGGGGTACCTTCAAATGCCAGGGGTTCCACTATGTAGAAATCCTTCCAGTCAACACGTTCAATTTATaGTACGCCATGACATCCAGA +
Preference number: 5 (lower is better)
Translates to: LRGTFKCQGFHYVEILPVNTFNL*YAMTSR
Trigger: TCTGGATGTCATGGCGTACAATAAATTGAACGTGTT...GACTGGAAGGATTTCTACATAGTGGAACCCCTGGCATTTGAAGGTACCCCTGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000567411.5
ENST00000569410.5
CDS TCA 90 bp TGCCTTCACAAGAATATTGAGAAGAGAGGCCAAGACATATACTCATaGGGACAGACACAGAGACAACTCAGCCTGCAAGAGTTGGACTTT +
Preference number: 5 (lower is better)
Translates to: CLHKNIEKRGQDIYS*GQTQRQLSLQELDF
Trigger: AAAGTCCAACTCTTGCAGGCTGAGTTGTCTCTGTGTCTGTCCTCATGAGTATATGTCTTGGCCTCTCTTCTCAATATTCTTGTGAAGGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563908.2
ENST00000568777.5
ENST00000684203.1
CDS TCA 90 bp TGGAATTCTAATAACAAGGACGCTCTATCACCAAAGTCCTACTGTTaGACCTTCTCCAGACTCCAGTACTATGACCCCTCCATTTCCCTT +
Preference number: 5 (lower is better)
Translates to: WNSNNKDALSPKSYC*TFSRLQYYDPSISL
Trigger: AAGGGAAATGGAGGGGTCATAGTACTGGAGTCTGGAGAAGGTTCAACAGTAGGACTTTGGTGATAGAGCGTCCTTGTTATTAGAATTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 90 bp GAATCTGAGGCAACTCTGGGCCAGGTCAATTCACAGCTCCATACTTaGACCCTAAAACTACATTGTTACAACACAAAAGGACAAGCAGAC +
Preference number: 5 (lower is better)
Translates to: ESEATLGQVNSQLHT*TLKLHCYNTKGQAD
Trigger: GTCTGCTTGTCCTTTTGTGTTGTAACAATGTAGTTTTAGGGTTCAAGTATGGAGCTGTGAATTGACCTGGCCCAGAGTTGCCTCAGATTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 90 bp TATGGCACTACAATGTCAGGGATAGGATGGCCTGGCAGAAGGCAATaGGAGAATTCAGAACCAAACTGGAATCTCAAATGTTACCCATCT +
Preference number: 5 (lower is better)
Translates to: YGTTMSGIGWPGRRQ*ENSEPNWNLKCYPS
Trigger: AGATGGGTAACATTTGAGATTCCAGTTTGGTTCTGAATTCTCTCATTGCCTTCTGCCAGGCCATCCTATCCCTGACATTGTAGTGCCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 90 bp GGAAAAGTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGATaGCAGTGGAACACGTTCAATTTATTGTACGCCATGACATCCTGT +
Preference number: 5 (lower is better)
Translates to: GKVKLSYGKEGSSTR*QWNTFNLLYAMTSC
Trigger: ACAGGATGTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCACTTTTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682657.1
ENST00000683742.1
CDS CCA 90 bp ATCCATGACTTCTTATGGCACTACAATGTCAGGGATAGGATGGCCTaGCAGAAGGCAATGAGAGAATTCAGAACCAAACTGGAATCTCAA +
Preference number: 5 (lower is better)
Translates to: IHDFLWHYNVRDRMA*QKAMREFRTKLESQ
Trigger: TTGAGATTCCAGTTTGGTTCTGAATTCTCTCATTGCCTTCTGCCAGGCCATCCTATCCCTGACATTGTAGTGCCATAAGAAGTCATGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CCA 90 bp CTCTGTACCCTAACCCCAAATAACTCAATCCCTTTAGAATATAGATaGATGTCTGAAAGGCAGCCAATGCTCTTGGTCTACTTAGCCCTC +
Preference number: 5 (lower is better)
Translates to: LCTLTPNNSIPLEYR*MSERQPMLLVYLAL
Trigger: GAGGGCTAAGTAGACCAAGAGCATTGGCTGCCTTTCAGACATCCATCTATATTCTAAAGGGATTGAGTTATTTGGGGTTAGGGTACAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CCA 90 bp GTGAAGCTCTCATATGGGAAGGAAGGATCATCTACCAGATGCCAGTaGAACACGTTCAATTTATTGTACGCCATGACATCCTGTAGGTTA +
Preference number: 5 (lower is better)
Translates to: VKLSYGKEGSSTRCQ*NTFNLLYAMTSCRL
Trigger: TAACCTACAGGATGTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAGCTTCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS-3UTR CAA 90 bp AAGCTGGTTACATCCAGGTGTGACTACAGAGACAACCAACACATTCTTCTCCAGGACATCGTACTGGAATaGAAAGTTGTTCGGGTAAAG +
Preference number: 5 (lower is better)
Translates to: KLVTSRCDYRDNQHILLQDIVLE*KVVRVK
Trigger: CTTTACCCGAACAACTTTCAATTCCAGTACGATGTC...CTGGAGAAGAATGTGTTGGTTGTCTCTGTAGTCACACCTGGATGTAACCAGCTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563762.5
CDS-3UTR CAA 90 bp GTATCATTTCAGCTTTCCTCACAGTCTCACTGTCCCAGAAGTCTAGGGGCAATGGTATGTGACACATACTaGTCATGCCCTGTATTGATT +
Preference number: 5 (lower is better)
Translates to: VSFQLSSQSHCPRSLGAMVCDTY*SCPVLI
Trigger: AATCAATACAGGGCATGACAAGTATGTGTCACATAC...CATTGCCCCTAGACTTCTGGGACAGTGAGACTGTGAGGAAAGCTGAAATGATAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CAA 90 bp CTCTCATATGGGAAGGAAGGATCATCTACCAGATGCCAGTGGAACACGTTCAATAACACGTTCAATTTATaGTACGCCATGACATCCTCG +
Preference number: 5 (lower is better)
Translates to: LSYGKEGSSTRCQWNTFNNTFNL*YAMTSS
Trigger: CGAGGATGTCATGGCGTACAATAAATTGAACGTGTT...ATTGAACGTGTTCCACTGGCATCTGGTAGATGATCCTTCCTTCCCATATGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000563762.5
ENST00000566672.5
CDS TCA 90 bp CCATCATTGCTTCATTCTATTCTCTACACCTTCCTCAAGTCTACTTaGTCACCACCTCCCTTATGCTCAGCAGACAATCAGAAGAGAACT +
Preference number: 5 (lower is better)
Translates to: PSLLHSILYTFLKST*SPPPLCSADNQKRT
Trigger: AGTTCTCTTCTGATTGTCTGCTGAGCATAAGGGAGGTGGTGATCAAGTAGACTTGAGGAAGGTGTAGAGAATAGAATGAAGCAATGATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CCA 90 bp GGAAGGCCCAGCACACTTCTACTTTTCCCAGAACACATCCAAAGATaGATGATAGAAGTGGTCTTTCCTCTTCTTGAAATAAATTCTGGC +
Preference number: 5 (lower is better)
Translates to: GRPSTLLLFPEHIQR*MIEVVFPLLEINSG
Trigger: GCCAGAATTTATTTCAAGAAGAGGAAAGACCACTTCTATCATCCATCTTTGGATGTGTTCTGGGAAAAGTAGAAGTGTGCTGGGCCTTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS TCA 90 bp CCCACATACCTCTTATCTATATTTCCTGTGCCTTCACAAGAATATTaGGAAGAGAGGCCAAGACATATACTCATGAGGACAGACACAGAG +
Preference number: 5 (lower is better)
Translates to: PTYLLSIFPVPSQEY*EERPRHILMRTDTE
Trigger: CTCTGTGTCTGTCCTCATGAGTATATGTCTTGGCCTCTCTTCTCAATATTCTTGTGAAGGCACAGGAAATATAGATAAGAGGTATGTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563908.2
ENST00000568777.5
ENST00000684203.1
CDS TCA 90 bp GCTCCTTCATATAGTTCACTGGAATATCCTCTCGCCACACCTGTATaGTTGTGTCTGGCTGAATCTGTTATAAAAGGTCAAATGGCAGTA +
Preference number: 5 (lower is better)
Translates to: APSYSSLEYPLATPV*LCLAESVIKGQMAV
Trigger: TACTGCCATTTGACCTTTTATAACAGATTCAGCCAGACACAATCATACAGGTGTGGCGAGAGGATATTCCAGTGAACTATATGAAGGAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682064.1
ENST00000682235.1
CDS CCA 90 bp TGCAGAACAAACATTGAACATGTCAGTTTCAAAGGAAGCTTACTATaGGGGCACAGGGAGATGAAGACAACTCTCCCAGGATTCTTAAAA +
Preference number: 5 (lower is better)
Translates to: CRTNIEHVSFKGSLL*GHREMKTTLPGFLK
Trigger: TTTTAAGAATCCTGGGAGAGTTGTCTTCATCTCCCTGTGCCCCCATAGTAAGCTTCCTTTGAAACTGACATGTTCAATGTTTGTTCTGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563908.2
CDS-3UTR CAA 90 bp ACCTACATCCTTTCTTTCACCCTTTCCCAGTATCATTTCAGCTTTCCTCACAGTTCCTCAATCTCAGTCTaGTTGATAAAGAATGTGCCC +
Preference number: 5 (lower is better)
Translates to: TYILSFTLSQYHFSFPHSSSISV*LIKNVP
Trigger: GGGCACATTCTTTATCAACAAGACTGAGATTGAGGA...ACTGTGAGGAAAGCTGAAATGATACTGGGAAAGGGTGAAAGAAAGGATGTAGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000268097.10
CDS-3UTR CAA 90 bp CATGTTCCACATCCTGAGTCCTCCAATGTATACTGTGTTCAAACAGAATATCCAGACATCGTACTGGAATaGAAAGTTGTTCGGGTAAAG +
Preference number: 5 (lower is better)
Translates to: HVPHPESSNVYCVQTEYPDIVLE*KVVRVK
Trigger: CTTTACCCGAACAACTTTCAATTCCAGTACGATGTC...TGGATATTCTGTTTGAACACAGTATACATTGGAGGACTCAGGATGTGGAACATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS TCA 90 bp CTTCAGTGTCTATCTCTAAAATGCACCTGTCTCATGGGGCTGTGGTaGAGACTAAATGAGACAATATTTGTAACAAACTTAGCACAGTGT +
Preference number: 5 (lower is better)
Translates to: LQCLSLKCTCLMGLW*RLNETIFVTNLAQC
Trigger: ACACTGTGCTAAGTTTGTTACAAATATTGTCTCATTTAGTCTTCACCACAGCCCCATGAGACAGGTGCATTTTAGAGATAGACACTGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CCA 90 bp GATGTCTCTATTTGGAAGGTTCTCAATGTAGCAGAGCATAACATTTaGGTACACAGGGAAAATGGATGTAGTGTAGGCTTGACGATTTTT +
Preference number: 5 (lower is better)
Translates to: DVSIWKVLNVAEHNI*VHRENGCSVGLTIF
Trigger: AAAAATCGTCAAGCCTACACTACATCCATTTTCCCTGTGTACCCAAATGTTATGCTCTGCTACATTGAGAACCTTCCAAATAGAGACATC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563908.2
ENST00000568777.5
ENST00000684203.1
CDS-3UTR CAA 90 bp TACACCTTGATCAAGTTTAGCTTCTTGGACTCAGTACTATACAGGGATACTAGAAGTAGCAGCAACAGCTaGGAAATTAGGCAATTAGTC +
Preference number: 5 (lower is better)
Translates to: YTLIKFSFLDSVLYRDTRSSSNS*EIRQLV
Trigger: GACTAATTGCCTAATTTCCAAGCTGTTGCTGCTACT...TCTAGTATCCCTGTATAGTACTGAGTCCAAGAAGCTAAACTTGATCAAGGTGTA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS GCA 90 bp AAAGCGGGGAAAGTCCTCAATCTCAGTCTTGTTGATAAAGAACTGTaGAGAACAAACATTGAACATGTCAGTTTCAAAGGAAGCTTACTA +
Preference number: 5 (lower is better)
Translates to: KAGKVLNLSLVDKEL*RTNIEHVSFKGSLL
Trigger: TAGTAAGCTTCCTTTGAAACTGACATGTTCAATGTTTGTTCTGCACAGTTCTTTATCAACAAGACTGAGATTGAGGACTTTCCCCGCTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563908.2
CDS-3UTR CAA 90 bp TACACCTTGATCAAGTTTAGCTTCTTGGACTCAGTACTATACAGGGATACTAGAATCAAGTTTAGCTTCTaGGACTCAGTACTATACAGG +
Preference number: 5 (lower is better)
Translates to: YTLIKFSFLDSVLYRDTRIKFSF*DSVLYR
Trigger: CCTGTATAGTACTGAGTCCAAGAAGCTAAACTTGAT...TCTAGTATCCCTGTATAGTACTGAGTCCAAGAAGCTAAACTTGATCAAGGTGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS TCA 90 bp ACAGGTTCTCTATCCAAGGTAGATTTTACCCTAATAGTGGAGGGTTaGACCAACATAGTATCTAATATAGCTTTACAGACCCTTGTCTAT +
Preference number: 5 (lower is better)
Translates to: TGSLSKVDFTLIVEG*TNIVSNIALQTLVY
Trigger: ATAGACAAGGGTCTGTAAAGCTATATTAGATACTATGTTGGTTCAACCCTCCACTATTAGGGTAAAATCTACCTTGGATAGAGAACCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS-3UTR CAA 90 bp AATATCCAAAGCAGGGGAACACCTACAGCTCACAGAAATAAAACTCAAATTTTTCTACCCACATACACCTaGATCAAGTTTAGCTTCTTG +
Preference number: 5 (lower is better)
Translates to: NIQSRGTPTAHRNKTQIFLPTYT*IKFSFL
Trigger: CAAGAAGCTAAACTTGATCAAGGTGTATGTGGGTAG...AAAAATTTGAGTTTTATTTCTGTGAGCTGTAGGTGTTCCCCTGCTTTGGATATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000567213.2
CDS GCA 72 bp CCAGGGCCAGAGGGCCGTCGCCCGTCCTGCGAACGCTaGCGCCAGCAGCAGCGAAAACCAAAGCCTGGAGCT +
Preference number: 6 (lower is better)
Translates to: PGPEGRRPSCER*RQQQRKPKPGA
Trigger: AGCTCCAGGCTTTGGTTTTCGCTGCTGCTGGCGGCAGCGTTCGCAGGACGGGCGACGGCCCTCTGGCCCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 41 transcripts:
ENST00000268097.10
ENST00000563762.5
ENST00000563908.2
ENST00000566304.5
ENST00000566672.5
ENST00000567027.6
ENST00000567159.5
ENST00000567213.2
ENST00000567411.5
ENST00000568260.2
ENST00000569410.5
ENST00000682061.1
ENST00000682177.1
ENST00000682461.1
ENST00000682653.1
ENST00000682657.1
ENST00000682721.1
ENST00000682843.1
ENST00000683003.1
ENST00000683133.1
ENST00000683228.1
ENST00000683243.1
ENST00000683463.1
ENST00000683548.1
ENST00000683579.1
ENST00000683587.1
ENST00000683681.1
ENST00000683735.1
ENST00000683853.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684125.1
ENST00000684203.1
ENST00000684231.1
ENST00000684263.1
ENST00000684305.1
ENST00000684415.1
ENST00000684520.1
ENST00000684602.1
ENST00000684667.1
CDS GCA 72 bp GTTCTGAGGCCAGGGCCAGAGGGCCGTCGCCCGTCCTaGGAACGCTGCCGCCAGCAGCAGCGAAAACCAAAG +
Preference number: 6 (lower is better)
Translates to: VLRPGPEGRRPS*ERCRQQQRKPK
Trigger: CTTTGGTTTTCGCTGCTGCTGGCGGCAGCGTTCGCAGGACGGGCGACGGCCCTCTGGCCCTGGCCTCAGAAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 41 transcripts:
ENST00000268097.10
ENST00000563762.5
ENST00000563908.2
ENST00000566304.5
ENST00000566672.5
ENST00000567027.6
ENST00000567159.5
ENST00000567213.2
ENST00000567411.5
ENST00000568260.2
ENST00000569410.5
ENST00000682061.1
ENST00000682177.1
ENST00000682461.1
ENST00000682653.1
ENST00000682657.1
ENST00000682721.1
ENST00000682843.1
ENST00000683003.1
ENST00000683133.1
ENST00000683228.1
ENST00000683243.1
ENST00000683463.1
ENST00000683548.1
ENST00000683579.1
ENST00000683587.1
ENST00000683681.1
ENST00000683735.1
ENST00000683853.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684125.1
ENST00000684203.1
ENST00000684231.1
ENST00000684263.1
ENST00000684305.1
ENST00000684415.1
ENST00000684520.1
ENST00000684602.1
ENST00000684667.1
CDS GCA 72 bp CGCTGGAAGGCCTCGTCGAGGACTGAGCAGCCGGGCTaGGCGGCCGAGCTGACATCGTACCGACTCGAGAAG +
Preference number: 6 (lower is better)
Translates to: RWKASSRTEQPG*AAELTSYRLEK
Trigger: CTTCTCGAGTCGGTACGATGTCAGCTCGGCCGCGCAGCCCGGCTGCTCAGTCCTCGACGAGGCCTTCCAGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569509.5
CDS CAA 72 bp CTGCCGCCAGCAGCAGCGAAAACCAAAGCCTGGAGCTaGTCATGGCCCGCTGGTCTCCCCTCTCGGAGGGGG +
Preference number: 6 (lower is better)
Translates to: LPPAAAKTKAWS*SWPAGLPSRRG
Trigger: CCCCCTCCGAGAGGGGAGACCAGCGGGCCATGACAAGCTCCAGGCTTTGGTTTTCGCTGCTGCTGGCGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000268097.10
ENST00000566672.5
ENST00000567027.6
ENST00000567411.5
ENST00000682653.1
ENST00000683228.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683681.1
ENST00000683853.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684125.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS CCA 72 bp CGAACGCTGCCGCCAGCAGCAGCGAAAACCAAAGCCTaGAGCTTGTCATGGCCCGCTGGTCTCCCCTCTCGG +
Preference number: 6 (lower is better)
Translates to: RTLPPAAAKTKA*SLSWPAGLPSR
Trigger: CCGAGAGGGGAGACCAGCGGGCCATGACAAGCTCCAGGCTTTGGTTTTCGCTGCTGCTGGCGGCAGCGTTCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 18 transcripts:
ENST00000268097.10
ENST00000566672.5
ENST00000567027.6
ENST00000567411.5
ENST00000682653.1
ENST00000683228.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683681.1
ENST00000683853.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684125.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS CCA 72 bp GGACCAGACAGTGGCCAAGCAGGGCCTGACTCGGTATaGAAAGGGAGGACCCCACAGGAGGACCCCCAAGGG +
Preference number: 6 (lower is better)
Translates to: GPDSGQAGPDSV*KGRTPQEDPQG
Trigger: CCCTTGGGGGTCCTCCTGTGGGGTCCTCCCTTTCCATACCGAGTCAGGCCCTGCTTGGCCACTGTCTGGTCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000682653.1
CDS CAA 72 bp GTTGTTCGGGTAAAGGACGTAGCGCTGGTCGGAGGTTaGGAAGTTCTGAGGCCAGGGCCAGAGGGCCGTCGC +
Preference number: 6 (lower is better)
Translates to: VVRVKDVALVGG*EVLRPGPEGRR
Trigger: GCGACGGCCCTCTGGCCCTGGCCTCAGAACTTCCAAACCTCCGACCAGCGCTACGTCCTTTACCCGAACAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 41 transcripts:
ENST00000268097.10
ENST00000563762.5
ENST00000563908.2
ENST00000566304.5
ENST00000566672.5
ENST00000567027.6
ENST00000567159.5
ENST00000567213.2
ENST00000567411.5
ENST00000568260.2
ENST00000569410.5
ENST00000682061.1
ENST00000682177.1
ENST00000682461.1
ENST00000682653.1
ENST00000682657.1
ENST00000682721.1
ENST00000682843.1
ENST00000683003.1
ENST00000683133.1
ENST00000683228.1
ENST00000683243.1
ENST00000683463.1
ENST00000683548.1
ENST00000683579.1
ENST00000683587.1
ENST00000683681.1
ENST00000683735.1
ENST00000683853.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684125.1
ENST00000684203.1
ENST00000684231.1
ENST00000684263.1
ENST00000684305.1
ENST00000684415.1
ENST00000684520.1
ENST00000684602.1
ENST00000684667.1
CDS CAA 90 bp GAATTGAAAGTTGTTCGGGTAAAGGACGTAGCGCTGGTCGGAGGTTaGGAAGTTCTGAGGCCAGGGCCAGAGGGCCGTCGCCCGTCCTGC +
Preference number: 6 (lower is better)
Translates to: ELKVVRVKDVALVGG*EVLRPGPEGRRPSC
Trigger: GCAGGACGGGCGACGGCCCTCTGGCCCTGGCCTCAGAACTTCCAAACCTCCGACCAGCGCTACGTCCTTTACCCGAACAACTTTCAATTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 41 transcripts:
ENST00000268097.10
ENST00000563762.5
ENST00000563908.2
ENST00000566304.5
ENST00000566672.5
ENST00000567027.6
ENST00000567159.5
ENST00000567213.2
ENST00000567411.5
ENST00000568260.2
ENST00000569410.5
ENST00000682061.1
ENST00000682177.1
ENST00000682461.1
ENST00000682653.1
ENST00000682657.1
ENST00000682721.1
ENST00000682843.1
ENST00000683003.1
ENST00000683133.1
ENST00000683228.1
ENST00000683243.1
ENST00000683463.1
ENST00000683548.1
ENST00000683579.1
ENST00000683587.1
ENST00000683681.1
ENST00000683735.1
ENST00000683853.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684125.1
ENST00000684203.1
ENST00000684231.1
ENST00000684263.1
ENST00000684305.1
ENST00000684415.1
ENST00000684520.1
ENST00000684602.1
ENST00000684667.1
CDS CCA 72 bp GCTCTGGGCCTGGAGGAAAAGGGGCATGTGCCAGATTaGGCCCTGTATTCCCTGCAAAGGTGCTGGACATCC +
Preference number: 6 (lower is better)
Translates to: ALGLEEKGHVPD*ALYSLQRCWTS
Trigger: GGATGTCCAGCACCTTTGCAGGGAATACAGGGCCCAATCTGGCACATGCCCCTTTTCCTCCAGGCCCAGAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000565873.1
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS CAA 72 bp GCCGGGCTGCGCGGCCGAGCTGACATCGTACTGGAATaGAAAGTTGTTCGGGTAAAGGACGTAGCGCTGGTC +
Preference number: 6 (lower is better)
Translates to: AGLRGRADIVLE*KVVRVKDVALV
Trigger: GACCAGCGCTACGTCCTTTACCCGAACAACTTTCAATTCCAGTACGATGTCAGCTCGGCCGCGCAGCCCGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 41 transcripts:
ENST00000268097.10
ENST00000563762.5
ENST00000563908.2
ENST00000566304.5
ENST00000566672.5
ENST00000567027.6
ENST00000567159.5
ENST00000567213.2
ENST00000567411.5
ENST00000568260.2
ENST00000569410.5
ENST00000682061.1
ENST00000682177.1
ENST00000682461.1
ENST00000682653.1
ENST00000682657.1
ENST00000682721.1
ENST00000682843.1
ENST00000683003.1
ENST00000683133.1
ENST00000683228.1
ENST00000683243.1
ENST00000683463.1
ENST00000683548.1
ENST00000683579.1
ENST00000683587.1
ENST00000683681.1
ENST00000683735.1
ENST00000683853.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684125.1
ENST00000684203.1
ENST00000684231.1
ENST00000684263.1
ENST00000684305.1
ENST00000684415.1
ENST00000684520.1
ENST00000684602.1
ENST00000684667.1
CDS CAA 72 bp CACAGTCTCTCCGGTTTCAGCCTCAAACTTGCGATGTaGGGCGAGCTCTCAGGCCGCTCCACACACCCCTAC +
Preference number: 6 (lower is better)
Translates to: HSLSGFSLKLAM*GELSGRSTHPY
Trigger: GTAGGGGTGTGTGGAGCGGCCTGAGAGCTCGCCCAACATCGCAAGTTTGAGGCTGAAACCGGAGAGACTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS CAA 90 bp CCTGGGGCTCAGGTCTGTTCAAACTCCTGCTCACAGAAGCCTACATaGAGGGGTTGGGCCTGGACACCTCGCCTGCAAGAGGACATGAAG +
Preference number: 6 (lower is better)
Translates to: PGAQVCSNSCSQKPT*RGWAWTPRLQEDMK
Trigger: CTTCATGTCCTCTTGCAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGAGTTTGAACAGACCTGAGCCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CAA 90 bp GCACACTGTGAACCCATCACAGTCTCTCCGGTTTCAGCCTCAAACTaGCGATGTTGGGCGAGCTCTCAGGCCGCTCCACACACCCCTACA +
Preference number: 6 (lower is better)
Translates to: AHCEPITVSPVSASN*RCWASSQAAPHTPT
Trigger: TGTAGGGGTGTGTGGAGCGGCCTGAGAGCTCGCCCAACATCGCAAGTTTGAGGCTGAAACCGGAGAGACTGTGATGGGTTCACAGTGTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS TCA 72 bp CGTCGAGGACTGAGCAGCCGGGCTGCGCGGCCGAGCTaGCATCGTACTGGAATTGAAAGTTGTTCGGGTAAA +
Preference number: 6 (lower is better)
Translates to: RRGLSSRAARPS*HRTGIESCSGK
Trigger: TTTACCCGAACAACTTTCAATTCCAGTACGATGTCAGCTCGGCCGCGCAGCCCGGCTGCTCAGTCCTCGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 41 transcripts:
ENST00000268097.10
ENST00000563762.5
ENST00000563908.2
ENST00000566304.5
ENST00000566672.5
ENST00000567027.6
ENST00000567159.5
ENST00000567213.2
ENST00000567411.5
ENST00000568260.2
ENST00000569410.5
ENST00000682061.1
ENST00000682177.1
ENST00000682461.1
ENST00000682653.1
ENST00000682657.1
ENST00000682721.1
ENST00000682843.1
ENST00000683003.1
ENST00000683133.1
ENST00000683228.1
ENST00000683243.1
ENST00000683463.1
ENST00000683548.1
ENST00000683579.1
ENST00000683587.1
ENST00000683681.1
ENST00000683735.1
ENST00000683853.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684125.1
ENST00000684203.1
ENST00000684231.1
ENST00000684263.1
ENST00000684305.1
ENST00000684415.1
ENST00000684520.1
ENST00000684602.1
ENST00000684667.1
CDS TCA 72 bp ACCCTGGATCAATCTAACATCTGCCTGCTGTGCCCCTaGCCCCGGCTACTGTACCCTACTGGAGGGAAGGGA +
Preference number: 6 (lower is better)
Translates to: TLDQSNICLLCP*PRLLYPTGGKG
Trigger: TCCCTTCCCTCCAGTAGGGTACAGTAGCCGGGGTCAGGGGCACAGCAGGCAGATGTTAGATTGATCCAGGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 72 bp CTGGCACCTAGAACATCAGCCCACAGACTCTCCTACTaGTTCCCAGAGCCCCTGACTAGGGCAGCAGCAGTT +
Preference number: 6 (lower is better)
Translates to: LAPRTSAHRLSY*FPEPLTRAAAV
Trigger: AACTGCTGCTGCCCTAGTCAGGGGCTCTGGGAAGCAGTAGGAGAGTCTGTGGGCTGATGTTCTAGGTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563908.2
ENST00000568777.5
ENST00000684203.1
CDS CCA 72 bp ACAGTCTCTCCGGTTTCAGCCTCAAACTTGCGATGTTaGGCGAGCTCTCAGGCCGCTCCACACACCCCTACA +
Preference number: 6 (lower is better)
Translates to: TVSPVSASNLRC*ASSQAAPHTPT
Trigger: TGTAGGGGTGTGTGGAGCGGCCTGAGAGCTCGCCCAACATCGCAAGTTTGAGGCTGAAACCGGAGAGACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS CAA 72 bp TGCTCTGGGCCTGGAGGAAAAGGGGCATGTGCCAGATaGGGCCCTGTATTCCCTGCAAAGGTGCTGGACATC +
Preference number: 6 (lower is better)
Translates to: CSGPGGKGACAR*GPVFPAKVLDI
Trigger: GATGTCCAGCACCTTTGCAGGGAATACAGGGCCCAATCTGGCACATGCCCCTTTTCCTCCAGGCCCAGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000565873.1
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS CAA 72 bp GAACCCATCACAGTCTCTCCGGTTTCAGCCTCAAACTaGCGATGTTGGGCGAGCTCTCAGGCCGCTCCACAC +
Preference number: 6 (lower is better)
Translates to: EPITVSPVSASN*RCWASSQAAPH
Trigger: GTGTGGAGCGGCCTGAGAGCTCGCCCAACATCGCAAGTTTGAGGCTGAAACCGGAGAGACTGTGATGGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS TCA 72 bp GACAGCAACTGCCCCAGAAGGACTCCCCTAGTCCACTaGCACTGTCTCCTAGAGTCTAGCAAGGCCCACACA +
Preference number: 6 (lower is better)
Translates to: DSNCPRRTPLVH*HCLLESSKAHT
Trigger: TGTGTGGGCCTTGCTAGACTCTAGGAGACAGTGTCAGTGGACTAGGGGAGTCCTTCTGGGGCAGTTGCTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563908.2
ENST00000568777.5
ENST00000684203.1
CDS TCA 72 bp CCCCTCTTCTCCTCAGTAGCTGCCCTGACCCATGTCTaGATGCTCTGGGTGACAGCTCTTCTTAACCAGGGC +
Preference number: 6 (lower is better)
Translates to: PLFSSVAALTHV*MLWVTALLNQG
Trigger: GCCCTGGTTAAGAAGAGCTGTCACCCAGAGCATTCAGACATGGGTCAGGGCAGCTACTGAGGAGAAGAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 72 bp AGGTCTGTTCAAACTCCTGCTCACAGAAGCCTACATTaGGGGGTTGGGCCTGGACACCTCGCCTGCAAGAGG +
Preference number: 6 (lower is better)
Translates to: RSVQTPAHRSLH*GVGPGHLACKR
Trigger: CCTCTTGCAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGAGTTTGAACAGACCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS GCA 72 bp TCTCACTCTCGTTGTGCCCCTCTTCTCCTCAGTAGCTaGCCTGACCCATGTCTGAATGCTCTGGGTGACAGC +
Preference number: 6 (lower is better)
Translates to: SHSRCAPLLLSS*PDPCLNALGDS
Trigger: GCTGTCACCCAGAGCATTCAGACATGGGTCAGGGCAGCTACTGAGGAGAAGAGGGGCACAACGAGAGTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 72 bp AACCCATCACAGTCTCTCCGGTTTCAGCCTCAAACTTaGGATGTTGGGCGAGCTCTCAGGCCGCTCCACACA +
Preference number: 6 (lower is better)
Translates to: NPSQSLRFQPQT*DVGRALRPLHT
Trigger: TGTGTGGAGCGGCCTGAGAGCTCGCCCAACATCGCAAGTTTGAGGCTGAAACCGGAGAGACTGTGATGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS GCA 72 bp TTGCACACAAATCTTCAGAAGGCTCGTTGCACGGCCTaGTCTCTCTCAGGCCAGAGCCTGGGGACCAGGTTT +
Preference number: 6 (lower is better)
Translates to: LHTNLQKARCTA*SLSGQSLGTRF
Trigger: AAACCTGGTCCCCAGGCTCTGGCCTGAGAGAGAGCAGGCCGTGCAACGAGCCTTCTGAAGATTTGTGTGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683860.1
CDS CCA 72 bp GTGCCAGATTGGGCCCTGTATTCCCTGCAAAGGTGCTaGACATCCACAGGCTGCTACCTCTTGTCTAGGCAC +
Preference number: 6 (lower is better)
Translates to: VPDWALYSLQRC*TSTGCYLLSRH
Trigger: GTGCCTAGACAAGAGGTAGCAGCCTGTGGATGTCCAGCACCTTTGCAGGGAATACAGGGCCCAATCTGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000565873.1
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS CAA 72 bp CAGGTCTGTTCAAACTCCTGCTCACAGAAGCCTACATaGAGGGGTTGGGCCTGGACACCTCGCCTGCAAGAG +
Preference number: 6 (lower is better)
Translates to: QVCSNSCSQKPT*RGWAWTPRLQE
Trigger: CTCTTGCAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGAGTTTGAACAGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS GCA 72 bp CTGTATTCCCTGCAAAGGTGCTGGACATCCACAGGCTaGTACCTCTTGTCTAGGCACCCTGGACTCACTCAG +
Preference number: 6 (lower is better)
Translates to: LYSLQRCWTSTG*YLLSRHPGLTQ
Trigger: CTGAGTGAGTCCAGGGTGCCTAGACAAGAGGTAGCAGCCTGTGGATGTCCAGCACCTTTGCAGGGAATACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000565873.1
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS GCA 72 bp AAAAGGGGCATGTGCCAGATTGGGCCCTGTATTCCCTaGAAAGGTGCTGGACATCCACAGGCTGCTACCTCT +
Preference number: 6 (lower is better)
Translates to: KRGMCQIGPCIP*KGAGHPQAATS
Trigger: AGAGGTAGCAGCCTGTGGATGTCCAGCACCTTTGCAGGGAATACAGGGCCCAATCTGGCACATGCCCCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 17 transcripts:
ENST00000565873.1
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS CCA 72 bp TCCTGCTCACAGAAGCCTACATTGAGGGGTTGGGCCTaGACACCTCGCCTGCAAGAGGACATGAAGAAATGG +
Preference number: 6 (lower is better)
Translates to: SCSQKPTLRGWA*TPRLQEDMKKW
Trigger: CCATTTCTTCATGTCCTCTTGCAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CCA 72 bp TCAAACTCCTGCTCACAGAAGCCTACATTGAGGGGTTaGGCCTGGACACCTCGCCTGCAAGAGGACATGAAG +
Preference number: 6 (lower is better)
Translates to: SNSCSQKPTLRG*AWTPRLQEDMK
Trigger: CTTCATGTCCTCTTGCAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGAGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CCA 72 bp GGGTCTATCAAACCTTCCCATCAGGGAGGGATGGCATaGAGGGAAGGCCCAGCACACTTCTACTTTTCCCAG +
Preference number: 6 (lower is better)
Translates to: GSIKPSHQGGMA*REGPAHFYFSQ
Trigger: CTGGGAAAAGTAGAAGTGTGCTGGGCCTTCCCTCCATGCCATCCCTCCCTGATGGGAAGGTTTGATAGACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS CAA 90 bp GTCATGTGGAGAGTGAATATTGCACACAAATCTTCAGAAGGCTCGTaGCACGGCCTGCTCTCTCTCAGGCCAGAGCCTGGGGACCAGGTT +
Preference number: 6 (lower is better)
Translates to: VMWRVNIAHKSSEGS*HGLLSLRPEPGDQV
Trigger: AACCTGGTCCCCAGGCTCTGGCCTGAGAGAGAGCAGGCCGTGCAACGAGCCTTCTGAAGATTTGTGTGCAATATTCACTCTCCACATGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683860.1
CDS TCA 72 bp CCTAGCTCTAGTCCCTCAGCTCACACGCCTAGGTTGTaGGTTCCTCAACAGGAGGGACCAATCTCAGTGTCT +
Preference number: 6 (lower is better)
Translates to: PSSSPSAHTPRL*VPQQEGPISVS
Trigger: AGACACTGAGATTGGTCCCTCCTGTTGAGGAACTCACAACCTAGGCGTGTGAGCTGAGGGACTAGAGCTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683133.1
ENST00000684305.1
CDS CCA 72 bp AACACTGAGAAGCACCAACGTGTGGGAAGCACAGTATaGCAAACAGCCCGGTCAGCCAGCAATGTCATGAGC +
Preference number: 6 (lower is better)
Translates to: NTEKHQRVGSTV*QTARSASNVMS
Trigger: GCTCATGACATTGCTGGCTGACCGGGCTGTTTGCCATACTGTGCTTCCCACACGTTGGTGCTTCTCAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CAA 72 bp TTCAAACTCCTGCTCACAGAAGCCTACATTGAGGGGTaGGGCCTGGACACCTCGCCTGCAAGAGGACATGAA +
Preference number: 6 (lower is better)
Translates to: FKLLLTEAYIEG*GLDTSPARGHE
Trigger: TTCATGTCCTCTTGCAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGAGTTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CAA 90 bp TCAGGTCTGTTCAAACTCCTGCTCACAGAAGCCTACATTGAGGGGTaGGGCCTGGACACCTCGCCTGCAAGAGGACATGAAGAAATGGCA +
Preference number: 6 (lower is better)
Translates to: SGLFKLLLTEAYIEG*GLDTSPARGHEEMA
Trigger: TGCCATTTCTTCATGTCCTCTTGCAGGCGAGGTGTCCAGGCCCAACCCCTCAATGTAGGCTTCTGTGAGCAGGAGTTTGAACAGACCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS TCA 72 bp GCTCAGATCATCTCACGGAAGCCTGCTCAGACCTCTTaGGCACTACCACATGGCTGTATCTCAGCTCTTTGG +
Preference number: 6 (lower is better)
Translates to: AQIISRKPAQTS*ALPHGCISALW
Trigger: CCAAAGAGCTGAGATACAGCCATGTGGTAGTGCTCAAGAGGTCTGAGCAGGCTTCCGTGAGATGATCTGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 72 bp AGTCTCCAGATGTTTCTGGGGACGGGACAAGGTTCCTaGAGAGTCCTTGCATGTGACAGGAGACTGGGATCT +
Preference number: 6 (lower is better)
Translates to: SLQMFLGTGQGS*RVLACDRRLGS
Trigger: AGATCCCAGTCTCCTGTCACATGCAAGGACTCTTCAGGAACCTTGTCCCGTCCCCAGAAACATCTGGAGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682064.1
ENST00000682235.1
CDS GCA 72 bp ATCAGGACAGGTTGCTTCTGGTTCTGGTTTTGCTGCTaGCAAGCTGAGCAAGTCTCAGGGCTCCCATTTCCT +
Preference number: 6 (lower is better)
Translates to: IRTGCFWFWFCC*QAEQVSGLPFP
Trigger: AGGAAATGGGAGCCCTGAGACTTGCTCAGCTTGGCAGCAGCAAAACCAGAACCAGAAGCAACCTGTCCTGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 72 bp AACAGCCCGGTCAGCCAGCAATGTCATGAGCACATGTaGCATGAGTCTGGCTGGAACAGCAGGAAATTGAGA +
Preference number: 6 (lower is better)
Translates to: NSPVSQQCHEHM*HESGWNSRKLR
Trigger: TCTCAATTTCCTGCTGTTCCAGCCAGACTCATGGCACATGTGCTCATGACATTGCTGGCTGACCGGGCTGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 72 bp GACCTTCAAGGCAAAGACCACACTCAAGGCAGAATCTaGAGGGCCATCCAAGCAGACAGGCTACAAACCCAT +
Preference number: 6 (lower is better)
Translates to: DLQGKDHTQGRI*RAIQADRLQTH
Trigger: ATGGGTTTGTAGCCTGTCTGCTTGGATGGCCCTGCAGATTCTGCCTTGAGTGTGGTCTTTGCCTTGAAGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CCA 72 bp GATCAATACCTTGTTATGAGCCACAGCCAGGTTGGATaGCTCCCAGAGAGTTCTACGGCTCAGCTCCACCTT +
Preference number: 6 (lower is better)
Translates to: DQYLVMSHSQVG*LPESSTAQLHL
Trigger: AAGGTGGAGCTGAGCCGTAGAACTCTCTGGGAGCCATCCAACCTGGCTGTGGCTCATAACAAGGTATTGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000565873.1
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS CCA 72 bp ACGGAAGCCTGCTCAGACCTCTTGAGCACTACCACATaGCTGTATCTCAGCTCTTTGGTCTGCCAAGAAGCA +
Preference number: 6 (lower is better)
Translates to: TEACSDLLSTTT*LYLSSLVCQEA
Trigger: TGCTTCTTGGCAGACCAAAGAGCTGAGATACAGCCATGTGGTAGTGCTCAAGAGGTCTGAGCAGGCTTCCGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CCA 72 bp CAGGAGCTGCCATGTCCAAAAGTCTCCAGATGTTTCTaGGGACGGGACAAGGTTCCTGAAGAGTCCTTGCAT +
Preference number: 6 (lower is better)
Translates to: QELPCPKVSRCF*GRDKVPEESLH
Trigger: ATGCAAGGACTCTTCAGGAACCTTGTCCCGTCCCCAGAAACATCTGGAGACTTTTGGACATGGCAGCTCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682064.1
ENST00000682235.1
CDS CCA 72 bp AGGAGATTCCTGGGCCTTATTCATACACAGGCAACATaGGACAACAGGTATGTGCTCCCTCTGTTCCCCAGC +
Preference number: 6 (lower is better)
Translates to: RRFLGLIHTQAT*DNRYVLPLFPS
Trigger: GCTGGGGAACAGAGGGAGCACATACCTGTTGTCCCATGTTGCCTGTGTATGAATAAGGCCCAGGAATCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682064.1
ENST00000682235.1
CDS CAA 90 bp GTCCCTCTCAACCACCTTCCCAATGTGGCCCTCACCCCAGCTAAGTaGTTTCATTTACTAACTGGAAATGTCTGGCCCAGACCTTCCTGC +
Preference number: 6 (lower is better)
Translates to: VPLNHLPNVALTPAK*FHLLTGNVWPRPSC
Trigger: GCAGGAAGGTCTGGGCCAGACATTTCCAGTTAGTAAATGAAACAACTTAGCTGGGGTGAGGGCCACATTGGGAAGGTGGTTGAGAGGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682064.1
CDS TCA 72 bp CATTCTGGAGTTCCAGGTCCTCCCTTACCTCTAGCCTaGCTCACCATCAGCACCTGCATGAAAGGTACAAGA +
Preference number: 6 (lower is better)
Translates to: HSGVPGPPLPLA*LTISTCMKGTR
Trigger: TCTTGTACCTTTCATGCAGGTGCTGATGGTGAGTCAGGCTAGAGGTAAGGGAGGACCTGGAACTCCAGAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563908.2
ENST00000568777.5
ENST00000684203.1
CDS TCA 72 bp GACCTGGAGAAGAAAGTTTCCCAGATGGCTCTAGGGTaGATCTTGAATGTTGTGATGCAGCTCGCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: DLEKKVSQMALG*ILNVVMQLARP
Trigger: AGGCCTGGCGAGCTGCATCACAACATTCAAGATTCACCCTAGAGCCATCTGGGAAACTTTCTTCTCCAGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569509.5
CDS TCA 72 bp CAATACCTGCCTACATTCTGCAAAGAGGAGGGAATCTaGGGCAACTCTGGGCCAGGTCAATTCACAGCTCCA +
Preference number: 6 (lower is better)
Translates to: QYLPTFCKEEGI*GNSGPGQFTAP
Trigger: TGGAGCTGTGAATTGACCTGGCCCAGAGTTGCCTCAGATTCCCTCCTCTTTGCAGAATGTAGGCAGGTATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 72 bp TCTTTCCCCTGGGCTGAAAACCAACCACTCCAAATCTaGAAGGATGGGACAAAGGACAAGGGAACCCTGCAG +
Preference number: 6 (lower is better)
Translates to: SFPWAENQPLQI*KDGTKDKGTLQ
Trigger: CTGCAGGGTTCCCTTGTCCTTTGTCCCATCCTTTCAGATTTGGAGTGGTTGGTTTTCAGCCCAGGGGAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682653.1
CDS GCA 72 bp GAAATCAGGACAGGTTGCTTCTGGTTCTGGTTTTGCTaGTGCCAAGCTGAGCAAGTCTCAGGGCTCCCATTT +
Preference number: 6 (lower is better)
Translates to: EIRTGCFWFWFC*CQAEQVSGLPF
Trigger: AAATGGGAGCCCTGAGACTTGCTCAGCTTGGCAGCAGCAAAACCAGAACCAGAAGCAACCTGTCCTGATTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 72 bp AAAAACAGACCAGAGGGCTGGGAAATCAGGACAGGTTaGTTCTGGTTCTGGTTTTGCTGCTGCCAAGCTGAG +
Preference number: 6 (lower is better)
Translates to: KNRPEGWEIRTG*FWFWFCCCQAE
Trigger: CTCAGCTTGGCAGCAGCAAAACCAGAACCAGAAGCAACCTGTCCTGATTTCCCAGCCCTCTGGTCTGTTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 72 bp AAGGAATCCAAGCGCTCAGATCATCTCACGGAAGCCTaGTCAGACCTCTTGAGCACTACCACATGGCTGTAT +
Preference number: 6 (lower is better)
Translates to: KESKRSDHLTEA*SDLLSTTTWLY
Trigger: ATACAGCCATGTGGTAGTGCTCAAGAGGTCTGAGCAGGCTTCCGTGAGATGATCTGAGCGCTTGGATTCCTT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 72 bp AAGGGAGGACATGGCATTTACCCTTGGCATAGGCAGTaGCTGATCATCTGTTCAGCTGTCTCACTCTCGTTG +
Preference number: 6 (lower is better)
Translates to: KGGHGIYPWHRQ*LIICSAVSLSL
Trigger: CAACGAGAGTGAGACAGCTGAACAGATGATCAGGCACTGCCTATGCCAAGGGTAAATGCCATGTCCTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 72 bp CACATACAAGCCTCTCCACCAATCACCAGAGCCTTCTaGTCAGGGGTACCTGAGGGAAAACAAGCAACAACA +
Preference number: 6 (lower is better)
Translates to: HIQASPPITRAF*SGVPEGKQATT
Trigger: TGTTGTTGCTTGTTTTCCCTCAGGTACCCCTGAGCAGAAGGCTCTGGTGATTGGTGGAGAGGCTTGTATGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682064.1
CDS GCA 72 bp CAGAGGGAGGCACTGCTGGTGGCTTCTTCTCTTCTCTaGCCCGGCTCACCTTTACTTTATTATCAAACACCT +
Preference number: 6 (lower is better)
Translates to: QREALLVASSLL*PGSPLLYYQTP
Trigger: AGGTGTTTGATAATAAAGTAAAGGTGAGCCGGGGCAGAGAAGAGAAGAAGCCACCAGCAGTGCCTCCCTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000683228.1
ENST00000683742.1
CDS GCA 72 bp TCTCAGGCCGCTCCACACACCCCTACAGGCTTGACCTaGCTCAGCTCTCAATTAAGTATTTATGGGGTCTAT +
Preference number: 6 (lower is better)
Translates to: SQAAPHTPTGLT*LSSQLSIYGVY
Trigger: ATAGACCCCATAAATACTTAATTGAGAGCTGAGGCAGGTCAAGCCTGTAGGGGTGTGTGGAGCGGCCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS CCA 72 bp TATGTTGAACCCAGAGTATTGTATGTTCTCAACAGCTaGGGCCCCTCTTCTGGAAACCCTGCAGAAGCCCCA +
Preference number: 6 (lower is better)
Translates to: YVEPRVLYVLNS*GPSSGNPAEAP
Trigger: TGGGGCTTCTGCAGGGTTTCCAGAAGAGGGGCCCCAGCTGTTGAGAACATACAATACTCTGGGTTCAACATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000563908.2
ENST00000568777.5
ENST00000684203.1
CDS CCA 72 bp CAGCAATGTCATGAGCACATGTGCCATGAGTCTGGCTaGAACAGCAGGAAATTGAGAAGCCTCCAGGGCTTA +
Preference number: 6 (lower is better)
Translates to: QQCHEHMCHESG*NSRKLRSLQGL
Trigger: TAAGCCCTGGAGGCTTCTCAATTTCCTGCTGTTCCAGCCAGACTCATGGCACATGTGCTCATGACATTGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CCA 72 bp AGCCCTTGCCATAAGAAGAGACGATGTCCAGCAGCCTaGAGAGGAGAGGAGTGTCTAGTAAGTGTCTGCTTA +
Preference number: 6 (lower is better)
Translates to: SPCHKKRRCPAA*RGEECLVSVCL
Trigger: TAAGCAGACACTTACTAGACACTCCTCTCCTCTCCAGGCTGCTGGACATCGTCTCTTCTTATGGCAAGGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682653.1
CDS CCA 72 bp TTATGGGGTCTATCAAACCTTCCCATCAGGGAGGGATaGCATGGAGGGAAGGCCCAGCACACTTCTACTTTT +
Preference number: 6 (lower is better)
Translates to: LWGLSNLPIREG*HGGKAQHTSTF
Trigger: AAAAGTAGAAGTGTGCTGGGCCTTCCCTCCATGCCATCCCTCCCTGATGGGAAGGTTTGATAGACCCCATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS CAA 72 bp AATTCCAGAGATTCTCACCTGGGGTGGGGCAAAGTATaGGCAAGAATCTGCAAGCTGAACAGGTGCCTCAGG +
Preference number: 6 (lower is better)
Translates to: NSRDSHLGWGKV*ARICKLNRCLR
Trigger: CCTGAGGCACCTGTTCAGCTTGCAGATTCTTGCCAATACTTTGCCCCACCCCAGGTGAGAATCTCTGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CAA 90 bp TGTCATGAGCACATGTGCCATGAGTCTGGCTGGAACAGCAGGAAATaGAGAAGCCTCCAGGGCTTAGGAGGTAGCATGAAAAACAGACCA +
Preference number: 6 (lower is better)
Translates to: CHEHMCHESGWNSRK*RSLQGLGGSMKNRP
Trigger: TGGTCTGTTTTTCATGCTACCTCCTAAGCCCTGGAGGCTTCTCAATTTCCTGCTGTTCCAGCCAGACTCATGGCACATGTGCTCATGACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CAA 90 bp AAGGATGTAAATAGGGTATCACCACTGTGGTTTTCCGCCTCCAAGTaGCTACTTTGCCTGGCTATGAAGAGGGCAGGAAATAGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: KDVNRVSPLWFSASK*LLCLAMKRAGNRQG
Trigger: CCCCTGCCTATTTCCTGCCCTCTTCATAGCCAGGCAAAGTAGCAACTTGGAGGCGGAAAACCACAGTGGTGATACCCTATTTACATCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 72 bp CTCCTAGAGTCTAGCAAGGCCCACACACAGGTATGTTaGACCCAGAGTATTGTATGTTCTCAACAGCTGGGG +
Preference number: 6 (lower is better)
Translates to: LLESSKAHTQVC*TQSIVCSQQLG
Trigger: CCCCAGCTGTTGAGAACATACAATACTCTGGGTTCAACATACCTGTGTGTGGGCCTTGCTAGACTCTAGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563908.2
ENST00000568777.5
ENST00000684203.1
CDS TCA 72 bp TCACTCAGGCCAAAGGAAGTGATCAATACCTTGTTATaGGCCACAGCCAGGTTGGATGGCTCCCAGAGAGTT +
Preference number: 6 (lower is better)
Translates to: SLRPKEVINTLL*ATARLDGSQRV
Trigger: AACTCTCTGGGAGCCATCCAACCTGGCTGTGGCTCATAACAAGGTATTGATCACTTCCTTTGGCCTGAGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000565873.1
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS TCA 72 bp AACCCATCTCCACAGGAGACTCTACAGGGAGACCAATaGGGACTTAACCTAGGAGCAAGGGTGAGGAAAAAC +
Preference number: 6 (lower is better)
Translates to: NPSPQETLQGDQ*GLNLGARVRKN
Trigger: GTTTTTCCTCACCCTTGCTCCTAGGTTAAGTCCTCATTGGTCTCCCTGTAGAGTCTCCTGTGGAGATGGGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 72 bp TACACAGGCACATCCCTGACAGAGGCAAAGGTGTCATaGCATCCTGTAAGTCAGCCTGGTTCAAATCCTGCT +
Preference number: 6 (lower is better)
Translates to: YTGTSLTEAKVS*HPVSQPGSNPA
Trigger: AGCAGGATTTGAACCAGGCTGACTTACAGGATGTCATGACACCTTTGCCTCTGTCAGGGATGTGCCTGTGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS TCA 72 bp TGGGGTGGGGCAAAGTATTGGCAAGAATCTGCAAGCTaGACAGGTGCCTCAGGTGATTCTGATACAGGTCTT +
Preference number: 6 (lower is better)
Translates to: WGGAKYWQESAS*TGASGDSDTGL
Trigger: AAGACCTGTATCAGAATCACCTGAGGCACCTGTTCAGCTTGCAGATTCTTGCCAATACTTTGCCCCACCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS GCA 72 bp TATTATCAAACACCTCCTGCCACACCACATAGCCCTTaGCATAAGAAGAGACGATGTCCAGCAGCCTGGAGA +
Preference number: 6 (lower is better)
Translates to: YYQTPPATPHSP*HKKRRCPAAWR
Trigger: TCTCCAGGCTGCTGGACATCGTCTCTTCTTATGGCAAGGGCTATGTGGTGTGGCAGGAGGTGTTTGATAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682653.1
CDS GCA 72 bp TATTATCAAACACCTCCTGCCACACCACATAGCCCTTaGCATAAGAAGAGACGATGTCCAGCAGCCCTCCTT +
Preference number: 6 (lower is better)
Translates to: YYQTPPATPHSP*HKKRRCPAALL
Trigger: AAGGAGGGCTGCTGGACATCGTCTCTTCTTATGGCAAGGGCTATGTGGTGTGGCAGGAGGTGTTTGATAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000684263.1
CDS CCA 72 bp ATAAAGAATGTGCCCTCAGCAGATTTCCAAACAAGCTaGCTAAAAGTCTCCAGACCTCGGAGAGCTCCCCAG +
Preference number: 6 (lower is better)
Translates to: IKNVPSADFQTS*LKVSRPRRAPQ
Trigger: CTGGGGAGCTCTCCGAGGTCTGGAGACTTTTAGCCAGCTTGTTTGGAAATCTGCTGAGGGCACATTCTTTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 28 transcripts:
ENST00000268097.10
ENST00000566304.5
ENST00000567027.6
ENST00000567159.5
ENST00000569410.5
ENST00000682061.1
ENST00000682177.1
ENST00000682653.1
ENST00000682721.1
ENST00000682843.1
ENST00000683133.1
ENST00000683228.1
ENST00000683463.1
ENST00000683548.1
ENST00000683579.1
ENST00000683587.1
ENST00000683681.1
ENST00000683735.1
ENST00000683853.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684125.1
ENST00000684263.1
ENST00000684305.1
ENST00000684415.1
ENST00000684520.1
ENST00000684667.1
CDS CCA 72 bp TACATTCTGCAAAGAGGAGGGAATCTGAGGCAACTCTaGGCCAGGTCAATTCACAGCTCCATACTTGAACCC +
Preference number: 6 (lower is better)
Translates to: YILQRGGNLRQL*ARSIHSSILEP
Trigger: GGGTTCAAGTATGGAGCTGTGAATTGACCTGGCCCAGAGTTGCCTCAGATTCCCTCCTCTTTGCAGAATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CCA 72 bp TCATCCCACTGGCATCACAACATCCATGACTTCTTATaGCACTACAATGTCAGGGATAGGATGGCCTGGCAG +
Preference number: 6 (lower is better)
Translates to: SSHWHHNIHDFL*HYNVRDRMAWQ
Trigger: CTGCCAGGCCATCCTATCCCTGACATTGTAGTGCCATAAGAAGTCATGGATGTTGTGATGCCAGTGGGATGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CCA 72 bp GGGAAGCCTTATTACAGGAATCATGGATGCTTGTGCTaGGTCTTGAGCAACTCACCTATGTTCTCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: GKPYYRNHGCLC*VLSNSPMFSRP
Trigger: AGGCCTGGAGAACATAGGTGAGTTGCTCAAGACCCAGCACAAGCATCCATGATTCCTGTAATAAGGCTTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS CCA 72 bp CCTGGGAATCTCAATTCCAGAGATTCTCACCTGGGGTaGGGCAAAGTATTGGCAAGAATCTGCAAGCTGAAC +
Preference number: 6 (lower is better)
Translates to: PGNLNSRDSHLG*GKVLARICKLN
Trigger: GTTCAGCTTGCAGATTCTTGCCAATACTTTGCCCCACCCCAGGTGAGAATCTCTGGAATTGAGATTCCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CCA 72 bp ATGCACCTGGGAATCTCAATTCCAGAGATTCTCACCTaGGGTGGGGCAAAGTATTGGCAAGAATCTGCAAGC +
Preference number: 6 (lower is better)
Translates to: MHLGISIPEILT*GGAKYWQESAS
Trigger: GCTTGCAGATTCTTGCCAATACTTTGCCCCACCCCAGGTGAGAATCTCTGGAATTGAGATTCCCAGGTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CAA 72 bp TGTTTCTGGGGACGGGACAAGGTTCCTGAAGAGTCCTaGCATGTGACAGGAGACTGGGATCTTACTGATCAA +
Preference number: 6 (lower is better)
Translates to: CFWGRDKVPEES*HVTGDWDLTDQ
Trigger: TTGATCAGTAAGATCCCAGTCTCCTGTCACATGCAAGGACTCTTCAGGAACCTTGTCCCGTCCCCAGAAACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682064.1
ENST00000682235.1
CDS TCA 72 bp GTCCTACTGTTGAACCTTCTCCAGACTCCAGTACTATaGCCCCTCCATTTCCCTTCTGTTCTCAGTCTTCTC +
Preference number: 6 (lower is better)
Translates to: VLLLNLLQTPVL*PLHFPSVLSLL
Trigger: GAGAAGACTGAGAACAGAAGGGAAATGGAGGGGTCATAGTACTGGAGTCTGGAGAAGGTTCAACAGTAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 72 bp TACGCCATGACATCCTGTAGGTTAAAGTGCACACTGTaGACCCATCACAGTCTCTCCGGTTTCAGCCTCAAA +
Preference number: 6 (lower is better)
Translates to: YAMTSCRLKCTL*THHSLSGFSLK
Trigger: TTTGAGGCTGAAACCGGAGAGACTGTGATGGGTTCACAGTGTGCACTTTAACCTACAGGATGTCATGGCGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS GCA 72 bp TTACCAGTAAATACCCTGGATCCCCACACCAATACCTaGCTACATTCTGCAAAGAGGAGGGAATCTGAGGCA +
Preference number: 6 (lower is better)
Translates to: LPVNTLDPHTNT*LHSAKRRESEA
Trigger: TGCCTCAGATTCCCTCCTCTTTGCAGAATGTAGGCAGGTATTGGTGTGGGGATCCAGGGTATTTACTGGTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 72 bp AGAGGGAAGCCTTATTACAGGAATCATGGATGCTTGTaGTGGGTCTTGAGCAACTCACCTATGTTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: RGKPYYRNHGCL*WVLSNSPMFSR
Trigger: CCTGGAGAACATAGGTGAGTTGCTCAAGACCCAGCACAAGCATCCATGATTCCTGTAATAAGGCTTCCCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS GCA 72 bp AAATGCTGTAAATATGGTGGCACTGGGGGACTTAGGTaGTGTCCTGTCCATGAACATGGATGCGAAATCCTG +
Preference number: 6 (lower is better)
Translates to: KCCKYGGTGGLR*CPVHEHGCEIL
Trigger: CAGGATTTCGCATCCATGTTCATGGACAGGACAGCACCTAAGTCCCCCAGTGCCACCATATTTACAGCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS GCA 72 bp CTTGGTCTACTTAGCCCTCTGTTCCTGACTCTAAAATaGTGTAAATATGGTGGCACTGGGGGACTTAGGTGC +
Preference number: 6 (lower is better)
Translates to: LGLLSPLFLTLK*CKYGGTGGLRC
Trigger: GCACCTAAGTCCCCCAGTGCCACCATATTTACAGCATTTTAGAGTCAGGAACAGAGGGCTAAGTAGACCAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CCA 72 bp CAACCCCACACATCATGGAGCCCCAATATCATTGTGTaGAGAATTCATCTGCATATCTACCCAGGCAGCCAT +
Preference number: 6 (lower is better)
Translates to: QPHTSWSPNIIV*RIHLHIYPGSH
Trigger: ATGGCTGCCTGGGTAGATATGCAGATGAATTCTCCACACAATGATATTGGGGCTCCATGATGTGTGGGGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CCA 72 bp GTCCTGTCCATGAACATGGATGCGAAATCCTGTCCTTaGGTCTCAGTCTATAACCTGACCAATCTCCTTAGG +
Preference number: 6 (lower is better)
Translates to: VLSMNMDAKSCP*VSVYNLTNLLR
Trigger: CCTAAGGAGATTGGTCAGGTTATAGACTGAGACCCAAGGACAGGATTTCGCATCCATGTTCATGGACAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CCA 72 bp AGGCTTGACCTGCCTCAGCTCTCAATTAAGTATTTATaGGGTCTATCAAACCTTCCCATCAGGGAGGGATGG +
Preference number: 6 (lower is better)
Translates to: RLDLPQLSIKYL*GLSNLPIREGW
Trigger: CCATCCCTCCCTGATGGGAAGGTTTGATAGACCCCATAAATACTTAATTGAGAGCTGAGGCAGGTCAAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS CAA 72 bp GGTCCCAGAATAAATTGTGAGAAAGTGATCATAAGCTaGGGTTTCCAAGGAGCCTGGGTTCATGGCTGGACC +
Preference number: 6 (lower is better)
Translates to: GPRINCEKVIIS*GFQGAWVHGWT
Trigger: GGTCCAGCCATGAACCCAGGCTCCTTGGAAACCCAAGCTTATGATCACTTTCTCACAATTTATTCTGGGACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563908.2
ENST00000568777.5
ENST00000684203.1
CDS CAA 72 bp AATAGGGTATCACCACTGTGGTTTTCCGCCTCCAAGTaGCTACTTTGCCTGGCTATGAAGAGGGCAGGAAAT +
Preference number: 6 (lower is better)
Translates to: NRVSPLWFSASK*LLCLAMKRAGN
Trigger: ATTTCCTGCCCTCTTCATAGCCAGGCAAAGTAGCAACTTGGAGGCGGAAAACCACAGTGGTGATACCCTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CAA 72 bp ACTCCCAACCCCACACATCATGGAGCCCCAATATCATaGTGTGGAGAATTCATCTGCATATCTACCCAGGCA +
Preference number: 6 (lower is better)
Translates to: TPNPTHHGAPIS*CGEFICISTQA
Trigger: TGCCTGGGTAGATATGCAGATGAATTCTCCACACAATGATATTGGGGCTCCATGATGTGTGGGGTTGGGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CAA 72 bp AGCAGAGGGAAGCCTTATTACAGGAATCATGGATGCTaGTGCTGGGTCTTGAGCAACTCACCTATGTTCTCC +
Preference number: 6 (lower is better)
Translates to: SRGKPYYRNHGC*CWVLSNSPMFS
Trigger: GGAGAACATAGGTGAGTTGCTCAAGACCCAGCACAAGCATCCATGATTCCTGTAATAAGGCTTCCCTCTGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS CAA 72 bp TCATCTACCAGATGCCAGTGGAACACGTTCAATTTATaGTACGCCATGACATCCTGTGAGGTAAGGACGGGG +
Preference number: 6 (lower is better)
Translates to: SSTRCQWNTFNL*YAMTSCEVRTG
Trigger: CCCCGTCCTTACCTCACAGGATGTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000682657.1
CDS CAA 90 bp AATCTGCAAGCTGAACAGGTGCCTCAGGTGATTCTGATACAGGTCTaGGAGATCCAGAAACGTTGGCGACATCTATTTATATCCTGCCCA +
Preference number: 6 (lower is better)
Translates to: NLQAEQVPQVILIQV*EIQKRWRHLFISCP
Trigger: TGGGCAGGATATAAATAGATGTCGCCAACGTTTCTGGATCTCCAAGACCTGTATCAGAATCACCTGAGGCACCTGTTCAGCTTGCAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS TCA 72 bp AATAACAAGGACGCTCTATCACCAAAGTCCTACTGTTaGACCTTCTCCAGACTCCAGTACTATGACCCCTCC +
Preference number: 6 (lower is better)
Translates to: NNKDALSPKSYC*TFSRLQYYDPS
Trigger: GGAGGGGTCATAGTACTGGAGTCTGGAGAAGGTTCAACAGTAGGACTTTGGTGATAGAGCGTCCTTGTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 72 bp CTCATGGTGAAGAATCCCTGTCCGAAGTTCTCTCAGTaGCTCATCTGGGTTTGGGCTGAAAGAAGTAGATAC +
Preference number: 6 (lower is better)
Translates to: LMVKNPCPKFSQ*LIWVWAERSRY
Trigger: GTATCTACTTCTTTCAGCCCAAACCCAGATGAGTCACTGAGAGAACTTCGGACAGGGATTCTTCACCATGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 72 bp GCAGCTACTGTGGTAGCCTGGAATCTTCCAAAAGCCTaGAGATCAATACTTCCTCTTGCCATTTGTGTTCGG +
Preference number: 6 (lower is better)
Translates to: AATVVAWNLPKA*RSILPLAICVR
Trigger: CCGAACACAAATGGCAAGAGGAAGTATTGATCTTCAGGCTTTTGGAAGATTCCAGGCTACCACAGTAGCTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS GCA 72 bp AACAGCAGAGGGAAGCCTTATTACAGGAATCATGGATaGTTGTGCTGGGTCTTGAGCAACTCACCTATGTTC +
Preference number: 6 (lower is better)
Translates to: NSRGKPYYRNHG*LCWVLSNSPMF
Trigger: GAACATAGGTGAGTTGCTCAAGACCCAGCACAAGCATCCATGATTCCTGTAATAAGGCTTCCCTCTGCTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS GCA 72 bp TTATTCATACACAGGCAACATGGGACAACAGGTATGTaGTCCCTCTGTTCCCCAGCAGCAAAGTATGTCTCT +
Preference number: 6 (lower is better)
Translates to: LFIHRQHGTTGM*SLCSPAAKYVS
Trigger: AGAGACATACTTTGCTGCTGGGGAACAGAGGGAGCACATACCTGTTGTCCCATGTTGCCTGTGTATGAATAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682064.1
ENST00000682235.1
CDS GCA 72 bp GTCATGACATCCTGTAAGTCAGCCTGGTTCAAATCCTaGTTCTTAGTGACTTTGGGCAAGGTCCTGAACTCT +
Preference number: 6 (lower is better)
Translates to: VMTSCKSAWFKS*FLVTLGKVLNS
Trigger: AGAGTTCAGGACCTTGCCCAAAGTCACTAAGAAGCAGGATTTGAACCAGGCTGACTTACAGGATGTCATGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CCA 72 bp ACTGGACCACTGCAAAATAATGGTCTCCATCTTGGCTaGGCCCTTGATGCTACCCTGAAAATCTTCTATCTC +
Preference number: 6 (lower is better)
Translates to: TGPLQNNGLHLG*ALDATLKIFYL
Trigger: GAGATAGAAGATTTTCAGGGTAGCATCAAGGGCCCAGCCAAGATGGAGACCATTATTTTGCAGTGGTCCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CCA 72 bp AGAGGCAAAGGTGTCATGACATCCTGTAAGTCAGCCTaGTTCAAATCCTGCTTCTTAGTGACTTTGGGCAAG +
Preference number: 6 (lower is better)
Translates to: RGKGVMTSCKSA*FKSCFLVTLGK
Trigger: CTTGCCCAAAGTCACTAAGAAGCAGGATTTGAACCAGGCTGACTTACAGGATGTCATGACACCTTTGCCTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS TCA 72 bp TGCTGTTGCTCCAAGCATAGAAGTGGAGCAAGGGAATaGAGACAAACTAAAGCAAGGTGTGGAATTCCGAGA +
Preference number: 6 (lower is better)
Translates to: CCCSKHRSGARE*RQTKARCGIPR
Trigger: TCTCGGAATTCCACACCTTGCTTTAGTTTGTCTTCATTCCCTTGCTCCACTTCTATGCTTGGAGCAACAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563908.2
ENST00000568777.5
ENST00000684203.1
CDS CCA 72 bp TCCCACATCATTCACCAGCAGAGGGTTTACCAAAAGTaGGAGAGATATTTGGCTAAGTCTGTATCTAGGCAC +
Preference number: 6 (lower is better)
Translates to: SHIIHQQRVYQK*ERYLAKSVSRH
Trigger: GTGCCTAGATACAGACTTAGCCAAATATCTCTCCCACTTTTGGTAAACCCTCTGCTGGTGAATGATGTGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563908.2
ENST00000568777.5
ENST00000684203.1
CDS CCA 72 bp AACATTGAACATGTCAGTTTCAAAGGAAGCTTACTATaGGGGCACAGGGAGATGAAGACAACTCTCCCAGGA +
Preference number: 6 (lower is better)
Translates to: NIEHVSFKGSLL*GHREMKTTLPG
Trigger: TCCTGGGAGAGTTGTCTTCATCTCCCTGTGCCCCCATAGTAAGCTTCCTTTGAAACTGACATGTTCAATGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563908.2
CDS CCA 72 bp CAACTCACCTATGTTCTCCAGGCCTCATTATCTCTCTaGGAAGTAAGGTTAACAATCCCTATCCCACATACC +
Preference number: 6 (lower is better)
Translates to: QLTYVLQASLSL*EVRLTIPIPHT
Trigger: GGTATGTGGGATAGGGATTGTTAACCTTACTTCCCAGAGAGATAATGAGGCCTGGAGAACATAGGTGAGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 17 transcripts:
ENST00000682061.1
ENST00000682064.1
ENST00000682235.1
ENST00000682653.1
ENST00000682657.1
ENST00000683003.1
ENST00000683463.1
ENST00000683548.1
ENST00000683587.1
ENST00000683735.1
ENST00000683860.1
ENST00000683884.1
ENST00000684041.1
ENST00000684203.1
ENST00000684263.1
ENST00000684415.1
ENST00000684520.1
CDS CAA 90 bp GGGCCAGGTCAATTCACAGCTCCATACTTGAACCCTAAAACTACATaGTTACAACACAAAAGGACAAGCAGACCTTCAAGGCAAAGACCA +
Preference number: 6 (lower is better)
Translates to: GPGQFTAPYLNPKTT*LQHKRTSRPSRQRP
Trigger: TGGTCTTTGCCTTGAAGGTCTGCTTGTCCTTTTGTGTTGTAACAATGTAGTTTTAGGGTTCAAGTATGGAGCTGTGAATTGACCTGGCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 72 bp CTTCATTCTATTCTCTACACCTTCCTCAAGTCTACTTaGTCACCACCTCCCTTATGCTCAGCAGACAATCAG +
Preference number: 6 (lower is better)
Translates to: LHSILYTFLKST*SPPPLCSADNQ
Trigger: CTGATTGTCTGCTGAGCATAAGGGAGGTGGTGATCAAGTAGACTTGAGGAAGGTGTAGAGAATAGAATGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 72 bp ATGGTCTCCATCTTGGCTGGGCCCTTGATGCTACCCTaGAAATCTTCTATCTCCATCATTGCTTCATTCTAT +
Preference number: 6 (lower is better)
Translates to: MVSILAGPLMLP*KSSISIIASFY
Trigger: ATAGAATGAAGCAATGATGGAGATAGAAGATTTTCAGGGTAGCATCAAGGGCCCAGCCAAGATGGAGACCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 72 bp ACAAACAACTCCATGACCTCAACAACTGCTTCTGAATaGAAGGCAGCTCTAGAGCACTGCTACTCCAAGTAT +
Preference number: 6 (lower is better)
Translates to: TNNSMTSTTASE*KAALEHCYSKY
Trigger: ATACTTGGAGTAGCAGTGCTCTAGAGCTGCCTTTCATTCAGAAGCAGTTGTTGAGGTCATGGAGTTGTTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 72 bp ATCACAACTAATCCATATGCAACTACCATGGCTCGCTaGCCTCATGACAAAATAAGAGAGGCCACACAAACA +
Preference number: 6 (lower is better)
Translates to: ITTNPYATTMAR*PHDKIREATQT
Trigger: TGTTTGTGTGGCCTCTCTTATTTTGTCATGAGGGCAGCGAGCCATGGTAGTTGCATATGGATTAGTTGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 72 bp ATTTCGGTGACTCTCAAACTGTCACTGTACACCAAATaGACCTGGGAATCTCAATTCCAGAGATTCTCACCT +
Preference number: 6 (lower is better)
Translates to: ISVTLKLSLYTK*TWESQFQRFSP
Trigger: AGGTGAGAATCTCTGGAATTGAGATTCCCAGGTGCATTTGGTGTACAGTGACAGTTTGAGAGTCACCGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CCA 72 bp GTGATTCTGATACAGGTCTTGGAGATCCAGAAACGTTaGCGACATCTATTTATATCCTGCCCATCTCTGTAC +
Preference number: 6 (lower is better)
Translates to: VILIQVLEIQKR*RHLFISCPSLY
Trigger: GTACAGAGATGGGCAGGATATAAATAGATGTCGCCAACGTTTCTGGATCTCCAAGACCTGTATCAGAATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CAA 72 bp GCTTCATTCTATTCTCTACACCTTCCTCAAGTCTACTaGATCACCACCTCCCTTATGCTCAGCAGACAATCA +
Preference number: 6 (lower is better)
Translates to: ASFYSLHLPQVY*ITTSLMLSRQS
Trigger: TGATTGTCTGCTGAGCATAAGGGAGGTGGTGATCAAGTAGACTTGAGGAAGGTGTAGAGAATAGAATGAAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CAA 72 bp GGTGATTCTGATACAGGTCTTGGAGATCCAGAAACGTaGGCGACATCTATTTATATCCTGCCCATCTCTGTA +
Preference number: 6 (lower is better)
Translates to: GDSDTGLGDPET*ATSIYILPISV
Trigger: TACAGAGATGGGCAGGATATAAATAGATGTCGCCAACGTTTCTGGATCTCCAAGACCTGTATCAGAATCACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CAA 90 bp TCCATCATTGCTTCATTCTATTCTCTACACCTTCCTCAAGTCTACTaGATCACCACCTCCCTTATGCTCAGCAGACAATCAGAAGAGAAC +
Preference number: 6 (lower is better)
Translates to: SIIASFYSLHLPQVY*ITTSLMLSRQSEEN
Trigger: GTTCTCTTCTGATTGTCTGCTGAGCATAAGGGAGGTGGTGATCAAGTAGACTTGAGGAAGGTGTAGAGAATAGAATGAAGCAATGATGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CAA 72 bp GCTACTCCAAGTATGGTCTGCAGATTAGCTGCCAATTaGCAAACTGTGTTACTGGCTGGTCACTATATAGAA +
Preference number: 6 (lower is better)
Translates to: ATPSMVCRLAAN*QTVLLAGHYIE
Trigger: TTCTATATAGTGACCAGCCAGTAACACAGTTTGCAAATTGGCAGCTAATCTGCAGACCATACTTGGAGTAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CAA 72 bp TCATCTACCAGATGCCAGTGGAACACGTTCAATTTATaGTACGCCATGACATCCTGTAGGTTAAAGTGCACA +
Preference number: 6 (lower is better)
Translates to: SSTRCQWNTFNL*YAMTSCRLKCT
Trigger: TGTGCACTTTAACCTACAGGATGTCATGGCGTACAATAAATTGAACGTGTTCCACTGGCATCTGGTAGATGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS CCA 72 bp CTAACCCCAAATAACTCAATCCCTTTAGAATATAGATaGATGTCTGAAAGGCAGCCAATGCTCTTGGTCTAC +
Preference number: 6 (lower is better)
Translates to: LTPNNSIPLEYR*MSERQPMLLVY
Trigger: GTAGACCAAGAGCATTGGCTGCCTTTCAGACATCCATCTATATTCTAAAGGGATTGAGTTATTTGGGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS CAA 72 bp GGAATCTTCCAAAAGCCTGAAGATCAATACTTCCTCTaGCCATTTGTGTTCGGTTGTCTGACTGATGTTAAG +
Preference number: 6 (lower is better)
Translates to: GIFQKPEDQYFL*PFVFGCLTDVK
Trigger: CTTAACATCAGTCAGACAACCGAACACAAATGGCAAGAGGAAGTATTGATCTTCAGGCTTTTGGAAGATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000683742.1
CDS CAA 90 bp ACCCACATACCTCTTATCTATATTTCCTGTGCCTTCACAAGAATATaGAGAAGAGAGGCCAAGACATATACTCATGAGGACAGACACAGA +
Preference number: 6 (lower is better)
Translates to: THIPLIYISCAFTRI*RREAKTYTHEDRHR
Trigger: TCTGTGTCTGTCCTCATGAGTATATGTCTTGGCCTCTCTTCTCAATATTCTTGTGAAGGCACAGGAAATATAGATAAGAGGTATGTGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000563908.2
ENST00000568777.5
ENST00000684203.1
CDS CAA 90 bp GGGATATTAGGAAGCCACTATCCATCTTTACTTCTGTATTTCATTTaGGGAGATGTCAGAGTAAGGGTTTTAGTGCCCTTCCTTACAACA +
Preference number: 6 (lower is better)
Translates to: GILGSHYPSLLLYFI*GDVRVRVLVPFLTT
Trigger: TGTTGTAAGGAAGGGCACTAAAACCCTTACTCTGACATCTCCCAAAATGAAATACAGAAGTAAAGATGGATAGTGGCTTCCTAATATCCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000563908.2
ENST00000568777.5
ENST00000684203.1
CDS TCA 72 bp TATAGTTCACTGGAATATCCTCTCGCCACACCTGTATaGTTGTGTCTGGCTGAATCTGTTATAAAAGGTCAA +
Preference number: 6 (lower is better)
Translates to: YSSLEYPLATPV*LCLAESVIKGQ
Trigger: TTGACCTTTTATAACAGATTCAGCCAGACACAATCATACAGGTGTGGCGAGAGGATATTCCAGTGAACTATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000682064.1
ENST00000682235.1
CDS TCA 72 bp CTATCCAAGGTAGATTTTACCCTAATAGTGGAGGGTTaGACCAACATAGTATCTAATATAGCTTTACAGACC +
Preference number: 6 (lower is better)
Translates to: LSKVDFTLIVEG*TNIVSNIALQT
Trigger: GGTCTGTAAAGCTATATTAGATACTATGTTGGTTCAACCCTCCACTATTAGGGTAAAATCTACCTTGGATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS TCA 72 bp CTATCTCTAAAATGCACCTGTCTCATGGGGCTGTGGTaGAGACTAAATGAGACAATATTTGTAACAAACTTA +
Preference number: 6 (lower is better)
Translates to: LSLKCTCLMGLW*RLNETIFVTNL
Trigger: TAAGTTTGTTACAAATATTGTCTCATTTAGTCTTCACCACAGCCCCATGAGACAGGTGCATTTTAGAGATAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000682653.1
ENST00000683853.1
CDS TCA 72 bp CAAAATAAGAGAGGCCACACAAACACCAGGTTTATCTaGACTATTACTTGGAAGACAGAAAAATACCTAATC +
Preference number: 6 (lower is better)
Translates to: QNKRGHTNTRFI*TITWKTEKYLI
Trigger: GATTAGGTATTTTTCTGTCTTCCAAGTAATAGTTCAGATAAACCTGGTGTTTGTGTGGCCTCTCTTATTTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS GCA 72 bp AAAGTCCTCAATCTCAGTCTTGTTGATAAAGAACTGTaGAGAACAAACATTGAACATGTCAGTTTCAAAGGA +
Preference number: 6 (lower is better)
Translates to: KVLNLSLVDKEL*RTNIEHVSFKG
Trigger: TCCTTTGAAACTGACATGTTCAATGTTTGTTCTGCACAGTTCTTTATCAACAAGACTGAGATTGAGGACTTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563908.2
CDS CAA 72 bp CAGTCTTACATTCTGGTACATATGCTTCTTATCTCATaGAAGATTGGCATATTAAGTAGTACTGCTCTTGAG +
Preference number: 6 (lower is better)
Translates to: QSYILVHMLLIS*KIGILSSTALE
Trigger: CTCAAGAGCAGTACTACTTAATATGCCAATCTTCAATGAGATAAGAAGCATATGTACCAGAATGTAAGACTG
36% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000568777.5
CDS CAA 72 bp AGGCCACACAAACACCAGGTTTATCTGAACTATTACTaGGAAGACAGAAAAATACCTAATCTTTCGATTTTT +
Preference number: 6 (lower is better)
Translates to: RPHKHQVYLNYY*EDRKIPNLSIF
Trigger: AAAAATCGAAAGATTAGGTATTTTTCTGTCTTCCAAGTAATAGTTCAGATAAACCTGGTGTTTGTGTGGCCT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568777.5