Pregenerated sensors for HES5 (Homo sapiens)
Ensembl gene IDs: ENSG00000197921, ENSG00000273529Ensembl transcript IDs: ENST00000378453.4, ENST00000612705.2, ENST00000627397.1
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CGGCACAGCCCGCCTGCCAGGGGTACGCCCAGCAGCTACGGGCCCTaGAGAAAGTCCTCTACAGGCTGGGGGCAGCAGTGTGCGAGCCCC | + |
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Preference number: 1 (lower is better) Translates to: RHSPPARGTPSSYGP*RKSSTGWGQQCASP Trigger: GGGGCTCGCACACTGCTGCCCCCAGCCTGTAGAGGACTTTCTTCAGGGCCCGTAGCTGCTGGGCGTACCCCTGGCAGGCGGGCTGTGCCG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR CCA 90 bp | GCACACACATTCTCTGAGAATGGGGCTCCTGCGGGCCGGCCAGCTTaGGGCCAGAGCCTTCCGGAGAAGGGCGCGTCCAAGCCCGGGGCG | + |
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Preference number: 1 (lower is better) Translates to: AHTFSENGAPAGRPA*GQSLPEKGASKPGA Trigger: CGCCCCGGGCTTGGACGCGCCCTTCTCCGGAAGGCTCTGGCCCCAAGCTGGCCGGCCCGCAGGAGCCCCATTCTCAGAGAATGTGTGTGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR GCA 90 bp | GTTCGGCCTTCACAAAAGGCAAATGTGCCCGCGGCACAGCCCGCCTaGCAGGGGTACGCCCAGCAGCTACGGGCCCTGAAGAAAGTCCTC | + |
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Preference number: 1 (lower is better) Translates to: VRPSQKANVPAAQPA*QGYAQQLRALKKVL Trigger: GAGGACTTTCTTCAGGGCCCGTAGCTGCTGGGCGTACCCCTGGCAGGCGGGCTGTGCCGCGGGCACATTTGCCTTTTGTGAAGGCCGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR GCA 90 bp | CCTATGAGGATACAGCTCGAGTTCGGCCTTCACAAAAGGCAAATGTaGCCGCGGCACAGCCCGCCTGCCAGGGGTACGCCCAGCAGCTAC | + |
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Preference number: 1 (lower is better) Translates to: PMRIQLEFGLHKRQM*PRHSPPARGTPSSY Trigger: GTAGCTGCTGGGCGTACCCCTGGCAGGCGGGCTGTGCCGCGGGCACATTTGCCTTTTGTGAAGGCCGAACTCGAGCTGTATCCTCATAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR TCA 90 bp | AGCCTTTTGGCCATGGCCCTCAGGGTCCTGGACGCCCGTCCGGGGTaGTCACTGTTTCCTATGAGGATACAGCTCGAGTTCGGCCTTCAC | + |
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Preference number: 1 (lower is better) Translates to: SLLAMALRVLDARPG*SLFPMRIQLEFGLH Trigger: GTGAAGGCCGAACTCGAGCTGTATCCTCATAGGAAACAGTGATCACCCCGGACGGGCGTCCAGGACCCTGAGGGCCATGGCCAAAAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR TCA 90 bp | CCCTCAGGGTCCTGGACGCCCGTCCGGGGTGATCACTGTTTCCTATaGGGATACAGCTCGAGTTCGGCCTTCACAAAAGGCAAATGTGCC | + |
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Preference number: 1 (lower is better) Translates to: PSGSWTPVRGDHCFL*GYSSSSAFTKGKCA Trigger: GGCACATTTGCCTTTTGTGAAGGCCGAACTCGAGCTGTATCCTCATAGGAAACAGTGATCACCCCGGACGGGCGTCCAGGACCCTGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR TCA 90 bp | CAGATTTTATTATGGCGGCTTCGGAGCAGTCCCGTGGCTTCCACGTaGCTGAGAGTTCAATTTCTGAGTACAAAGTCGTGCCCACACGCA | + |
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Preference number: 1 (lower is better) Translates to: QILLWRLRSSPVAST*LRVQFLSTKSCPHA Trigger: TGCGTGTGGGCACGACTTTGTACTCAGAAATTGAACTCTCAGTCACGTGGAAGCCACGGGACTGCTCCGAAGCCGCCATAATAAAATCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR CCA 90 bp | CTTCCCAGAAGTCACTTGCTTAAATGCAAACACAGAACAACCCCATaGGGTCAGACACTTGGCAGAAGATGGGCCCTGATTGTCCTAAAA | + |
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Preference number: 1 (lower is better) Translates to: LPRSHLLKCKHRTTP*GQTLGRRWALIVLK Trigger: TTTTAGGACAATCAGGGCCCATCTTCTGCCAAGTGTCTGACCCCATGGGGTTGTTCTGTGTTTGCATTTAAGCAAGTGACTTCTGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTCGGCCTTCACAAAAGGCAAATGTGCCCGCGGCACAGCCCGCCTGCCAGGGAGCAGCTACGGGCCCTaGAGAAAGTCCTCTACAGGC | + |
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Preference number: 2 (lower is better) Translates to: SSAFTKGKCARGTARLPGSSYGP*RKSSTG Trigger: GCCTGTAGAGGACTTTCTTCAGGGCCCGTAGCTGCT...CCCTGGCAGGCGGGCTGTGCCGCGGGCACATTTGCCTTTTGTGAAGGCCGAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR-3UTR CCA 90 bp | CATCCACCCACACAGAGGAATCCTTTAAGGATCATAGTGGAGGCACCCACCCTCGCGGGCCGGCCAGCTTaGGGCCAGAGCCTTCCGGAG | + |
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Preference number: 2 (lower is better) Translates to: HPPTQRNPLRIIVEAPTLAGRPA*GQSLPE Trigger: CTCCGGAAGGCTCTGGCCCCAAGCTGGCCGGCCCGC...GAGGGTGGGTGCCTCCACTATGATCCTTAAAGGATTCCTCTGTGTGGGTGGATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGAGGAATCCTTTAAGGATCATAGTGGAGGCACCCACCCTCCCCAGACAGCCTGGCCCTCAGGGTCCTaGACGCCCGTCCGGGGTGAT | + |
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Preference number: 2 (lower is better) Translates to: TEESFKDHSGGTHPPQTAWPSGS*TPVRGD Trigger: ATCACCCCGGACGGGCGTCCAGGACCCTGAGGGCCA...GGCTGTCTGGGGAGGGTGGGTGCCTCCACTATGATCCTTAAAGGATTCCTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCACACAGAGGAATCCTTTAAGGATCATAGTGGAGGCACCCACCCTCCCCAGCACAAAAGGCAAATGTaGCCGCGGCACAGCCCGCCT | + |
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Preference number: 2 (lower is better) Translates to: THTEESFKDHSGGTHPPQHKRQM*PRHSPP Trigger: AGGCGGGCTGTGCCGCGGGCACATTTGCCTTTTGTG...CTGGGGAGGGTGGGTGCCTCCACTATGATCCTTAAAGGATTCCTCTGTGTGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR-3UTR TCA 90 bp | ACCCACACAGAGGAATCCTTTAAGGATCATAGTGGAGGCACCCACCCTCCCCAGTGCACACACATTCTCTaGGAATGGGGCTCCTGCGGG | + |
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Preference number: 2 (lower is better) Translates to: THTEESFKDHSGGTHPPQCTHIL*EWGSCG Trigger: CCCGCAGGAGCCCCATTCTCAGAGAATGTGTGTGCA...CTGGGGAGGGTGGGTGCCTCCACTATGATCCTTAAAGGATTCCTCTGTGTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR-3UTR CCA 90 bp | TTCGGCCTTCACAAAAGGCAAATGTGCCCGCGGCACAGCCCGCCTGCCAGGGGTACACTTGGCAGAAGATaGGCCCTGATTGTCCTAAAA | + |
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Preference number: 2 (lower is better) Translates to: FGLHKRQMCPRHSPPARGTLGRR*ALIVLK Trigger: TTTTAGGACAATCAGGGCCCATCTTCTGCCAAGTGT...ACCCCTGGCAGGCGGGCTGTGCCGCGGGCACATTTGCCTTTTGTGAAGGCCGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR-3UTR TCA 90 bp | CGGGCGGCCGGGGACTTCCCAGAAGTCACTTGCTTAAATGCAAACACAGAACAATGCACACACATTCTCTaGGAATGGGGCTCCTGCGGG | + |
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Preference number: 2 (lower is better) Translates to: RAAGDFPEVTCLNANTEQCTHIL*EWGSCG Trigger: CCCGCAGGAGCCCCATTCTCAGAGAATGTGTGTGCA...TTGTTCTGTGTTTGCATTTAAGCAAGTGACTTCTGGGAAGTCCCCGGCCGCCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGATACAGCTCGAGTTCGGCCTTCACAAAAGGCAAATGTGCCCGCGGCACAGATGGGGTCAGACACTTaGCAGAAGATGGGCCCTGAT | + |
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Preference number: 2 (lower is better) Translates to: EDTARVRPSQKANVPAAQMGSDT*QKMGPD Trigger: ATCAGGGCCCATCTTCTGCCAAGTGTCTGACCCCAT...CTGTGCCGCGGGCACATTTGCCTTTTGTGAAGGCCGAACTCGAGCTGTATCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR CCA 72 bp | CGCTTCCCTACAGGCGAGAGGAGCAGGCTCGCCCTCTaGTCGTCGGGCCGCGCGCCCGCAGGTCCCGCCGGG | + |
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Preference number: 3 (lower is better) Translates to: RFPTGERSRLAL*SSGRAPAGPAG Trigger: CCCGGCGGGACCTGCGGGCGCGCGGCCCGACGACCAGAGGGCGAGCCTGCTCCTCTCGCCTGTAGGGAAGCG 78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR CCA 72 bp | TTCTCTGAGAATGGGGCTCCTGCGGGCCGGCCAGCTTaGGGCCAGAGCCTTCCGGAGAAGGGCGCGTCCAAG | + |
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Preference number: 3 (lower is better) Translates to: FSENGAPAGRPA*GQSLPEKGASK Trigger: CTTGGACGCGCCCTTCTCCGGAAGGCTCTGGCCCCAAGCTGGCCGGCCCGCAGGAGCCCCATTCTCAGAGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR TCA 72 bp | CCGCCTGCCAGGGGTACGCCCAGCAGCTACGGGCCCTaGAGAAAGTCCTCTACAGGCTGGGGGCAGCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: PPARGTPSSYGP*RKSSTGWGQQC Trigger: ACACTGCTGCCCCCAGCCTGTAGAGGACTTTCTTCAGGGCCCGTAGCTGCTGGGCGTACCCCTGGCAGGCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR GCA 72 bp | TCACAAAAGGCAAATGTGCCCGCGGCACAGCCCGCCTaGCAGGGGTACGCCCAGCAGCTACGGGCCCTGAAG | + |
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Preference number: 3 (lower is better) Translates to: SQKANVPAAQPA*QGYAQQLRALK Trigger: CTTCAGGGCCCGTAGCTGCTGGGCGTACCCCTGGCAGGCGGGCTGTGCCGCGGGCACATTTGCCTTTTGTGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR GCA 72 bp | ATACAGCTCGAGTTCGGCCTTCACAAAAGGCAAATGTaGCCGCGGCACAGCCCGCCTGCCAGGGGTACGCCC | + |
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Preference number: 3 (lower is better) Translates to: IQLEFGLHKRQM*PRHSPPARGTP Trigger: GGGCGTACCCCTGGCAGGCGGGCTGTGCCGCGGGCACATTTGCCTTTTGTGAAGGCCGAACTCGAGCTGTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR TCA 72 bp | GTCCTAAAACGGCAGGGACTCTGCACACACATTCTCTaGGAATGGGGCTCCTGCGGGCCGGCCAGCTTGGGG | + |
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Preference number: 3 (lower is better) Translates to: VLKRQGLCTHIL*EWGSCGPASLG Trigger: CCCCAAGCTGGCCGGCCCGCAGGAGCCCCATTCTCAGAGAATGTGTGTGCAGAGTCCCTGCCGTTTTAGGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR TCA 72 bp | GCCATGGCCCTCAGGGTCCTGGACGCCCGTCCGGGGTaGTCACTGTTTCCTATGAGGATACAGCTCGAGTTC | + |
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Preference number: 3 (lower is better) Translates to: AMALRVLDARPG*SLFPMRIQLEF Trigger: GAACTCGAGCTGTATCCTCATAGGAAACAGTGATCACCCCGGACGGGCGTCCAGGACCCTGAGGGCCATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR-3UTR CAA 90 bp | GTTCAATTTCTGAGTACAAAGTCGTGCCCACACGCATCCACCCACACAGAGGAATGCGGGCCGGCCAGCTaGGGGCCAGAGCCTTCCGGA | + |
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Preference number: 3 (lower is better) Translates to: VQFLSTKSCPHASTHTEECGPAS*GPEPSG Trigger: TCCGGAAGGCTCTGGCCCCAAGCTGGCCGGCCCGCA...TTCCTCTGTGTGGGTGGATGCGTGTGGGCACGACTTTGTACTCAGAAATTGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR TCA 72 bp | TCCTGGACGCCCGTCCGGGGTGATCACTGTTTCCTATaGGGATACAGCTCGAGTTCGGCCTTCACAAAAGGC | + |
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Preference number: 3 (lower is better) Translates to: SWTPVRGDHCFL*GYSSSSAFTKG Trigger: GCCTTTTGTGAAGGCCGAACTCGAGCTGTATCCTCATAGGAAACAGTGATCACCCCGGACGGGCGTCCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR TCA 72 bp | TTATGGCGGCTTCGGAGCAGTCCCGTGGCTTCCACGTaGCTGAGAGTTCAATTTCTGAGTACAAAGTCGTGC | + |
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Preference number: 3 (lower is better) Translates to: LWRLRSSPVAST*LRVQFLSTKSC Trigger: GCACGACTTTGTACTCAGAAATTGAACTCTCAGTCACGTGGAAGCCACGGGACTGCTCCGAAGCCGCCATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGAGGAATCCTTTAAGGATCATAGTGGAGGCACCCACCCTCCCCAGACAGCCCTTCCCAGAAGTCACTaGCTTAAATGCAAACACAGA | + |
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Preference number: 3 (lower is better) Translates to: TEESFKDHSGGTHPPQTALPRSH*LKCKHR Trigger: TCTGTGTTTGCATTTAAGCAAGTGACTTCTGGGAAG...GGCTGTCTGGGGAGGGTGGGTGCCTCCACTATGATCCTTAAAGGATTCCTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR GCA 90 bp | CCCTACAGGCGAGAGGAGCAGGCTCGCCCTCTGGTCGTCGGGCCGCGCGCCCGCGCGGCACAGCCCGCCTaGCAGGGGTACGCCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: PYRREEQARPLVVGPRARAAQPA*QGYAQQ Trigger: CTGCTGGGCGTACCCCTGGCAGGCGGGCTGTGCCGC...GCGGGCGCGCGGCCCGACGACCAGAGGGCGAGCCTGCTCCTCTCGCCTGTAGGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR CCA 90 bp | GCGTCCAAGCCCGGGGCGGACGACGGCGGGAAGGCGCTTCCCTACAGGCGAGAGGCGGGCCGGCCAGCTTaGGGCCAGAGCCTTCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: ASKPGADDGGKALPYRREAGRPA*GQSLPE Trigger: CTCCGGAAGGCTCTGGCCCCAAGCTGGCCGGCCCGC...CTCTCGCCTGTAGGGAAGCGCCTTCCCGCCGTCGTCCGCCCCGGGCTTGGACGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR CCA 90 bp | GGGGCGGACGACGGCGGGAAGGCGCTTCCCTACAGGCGAGAGGAGCAGGCTCGCGCGGGCCGGCCAGCTTaGGGCCAGAGCCTTCCGGAG | + |
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Preference number: 4 (lower is better) Translates to: GADDGGKALPYRREEQARAGRPA*GQSLPE Trigger: CTCCGGAAGGCTCTGGCCCCAAGCTGGCCGGCCCGC...GCGAGCCTGCTCCTCTCGCCTGTAGGGAAGCGCCTTCCCGCCGTCGTCCGCCCC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR CCA 90 bp | CCGGAGAAGGGCGCGTCCAAGCCCGGGGCGGACGACGGCGGGAAGGCGCTTCCCTGGCCCTCAGGGTCCTaGACGCCCGTCCGGGGTGAT | + |
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Preference number: 4 (lower is better) Translates to: PEKGASKPGADDGGKALPWPSGS*TPVRGD Trigger: ATCACCCCGGACGGGCGTCCAGGACCCTGAGGGCCA...GGGAAGCGCCTTCCCGCCGTCGTCCGCCCCGGGCTTGGACGCGCCCTTCTCCGG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR GCA 90 bp | GGGCTCCTGCGGGCCGGCCAGCTTGGGGCCAGAGCCTTCCGGAGAAGGGCGCGTCAGTGCTGGGGGCCATaGCTGGCGCGGAACAGGCGA | + |
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Preference number: 4 (lower is better) Translates to: GLLRAGQLGARAFRRRARQCWGP*LARNRR Trigger: TCGCCTGTTCCGCGCCAGGCATGGCCCCCAGCACTG...ACGCGCCCTTCTCCGGAAGGCTCTGGCCCCAAGCTGGCCGGCCCGCAGGAGCCC 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR GCA 90 bp | CTCCTGCGGGCCGGCCAGCTTGGGGCCAGAGCCTTCCGGAGAAGGGCGCGTCCAGCTCCACGGCCACAGTaGTGGGGGCCATGCCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: LLRAGQLGARAFRRRARPAPRPQ*WGPCLA Trigger: CGCCAGGCATGGCCCCCAGCACTGTGGCCGTGGAGC...TGGACGCGCCCTTCTCCGGAAGGCTCTGGCCCCAAGCTGGCCGGCCCGCAGGAG 73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR GCA 90 bp | CCGGAGAAGGGCGCGTCCAAGCCCGGGGCGGACGACGGCGGGAAGGCGCTTCCCTGGAGCGTCAGGAACTaGACGGCCTCCTGCAGGCAC | + |
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Preference number: 4 (lower is better) Translates to: PEKGASKPGADDGGKALPWSVRN*TASCRH Trigger: GTGCCTGCAGGAGGCCGTGCAGTTCCTGACGCTCCA...GGGAAGCGCCTTCCCGCCGTCGTCCGCCCCGGGCTTGGACGCGCCCTTCTCCGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR CCA 90 bp | TCCCTACAGGCGAGAGGAGCAGGCTCGCCCTCTGGTCGTCGGGCCGCGCGCCCGGTGTCGCTGGCGGCGTaGAGCGTCAGGAACTGCACG | + |
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Preference number: 4 (lower is better) Translates to: SLQARGAGSPSGRRAARPVSLAA*SVRNCT Trigger: CGTGCAGTTCCTGACGCTCCACGCCGCCAGCGACAC...CGGGCGCGCGGCCCGACGACCAGAGGGCGAGCCTGCTCCTCTCGCCTGTAGGGA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR CCA 90 bp | ATGGGGCTCCTGCGGGCCGGCCAGCTTGGGGCCAGAGCCTTCCGGAGAAGGGCGGCGGCCGGGGGCCGCTaGAAGTGGTACAGCAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: MGLLRAGQLGARAFRRRAAAGGR*KWYSSF Trigger: GAAGCTGCTGTACCACTTCCAGCGGCCCCCGGCCGC...CGCCCTTCTCCGGAAGGCTCTGGCCCCAAGCTGGCCGGCCCGCAGGAGCCCCAT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR TCA 90 bp | AATGGGGCTCCTGCGGGCCGGCCAGCTTGGGGCCAGAGCCTTCCGGAGAAGGGCCCAGACAGCCCACCGTaGGCCCCAGCCAGACCACCA | + |
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Preference number: 4 (lower is better) Translates to: NGAPAGRPAWGQSLPEKGPDSPP*APARPP Trigger: TGGTGGTCTGGCTGGGGCTCACGGTGGGCTGTCTGG...GCCCTTCTCCGGAAGGCTCTGGCCCCAAGCTGGCCGGCCCGCAGGAGCCCCATT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR GCA 90 bp | GACGACGGCGGGAAGGCGCTTCCCTACAGGCGAGAGGAGCAGGCTCGCCCTCTGGCTCCACGGCCACAGTaGTGGGGGCCATGCCTGGCG | + |
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Preference number: 4 (lower is better) Translates to: DDGGKALPYRREEQARPLAPRPQ*WGPCLA Trigger: CGCCAGGCATGGCCCCCAGCACTGTGGCCGTGGAGC...CAGAGGGCGAGCCTGCTCCTCTCGCCTGTAGGGAAGCGCCTTCCCGCCGTCGTC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR GCA 90 bp | GGCCAGCTTGGGGCCAGAGCCTTCCGGAGAAGGGCGCGTCCAAGCCCGGGGCGGCTGGGGGCAGCAGTGTaGGAGCCCCGGCACTACAAA | + |
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Preference number: 4 (lower is better) Translates to: GQLGARAFRRRARPSPGRLGAAV*EPRHYK Trigger: TTTGTAGTGCCGGGGCTCGCACACTGCTGCCCCCAG...CCGCCCCGGGCTTGGACGCGCCCTTCTCCGGAAGGCTCTGGCCCCAAGCTGGCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR CCA 90 bp | TCCCTACAGGCGAGAGGAGCAGGCTCGCCCTCTGGTCGTCGGGCCGCGCGCCCGTCATCTGCGTGTCGCTaGCGGCGTGGAGCGTCAGGA | + |
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Preference number: 4 (lower is better) Translates to: SLQARGAGSPSGRRAARPSSACR*RRGASG Trigger: TCCTGACGCTCCACGCCGCCAGCGACACGCAGATGA...CGGGCGCGCGGCCCGACGACCAGAGGGCGAGCCTGCTCCTCTCGCCTGTAGGGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR GCA 90 bp | GGGCTCCTGCGGGCCGGCCAGCTTGGGGCCAGAGCCTTCCGGAGAAGGGCGCGTTACAGCAGCTTCATCTaGGTGTCGCTGGCGGCGTGG | + |
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Preference number: 4 (lower is better) Translates to: GLLRAGQLGARAFRRRARYSSFI*VSLAAW Trigger: CCACGCCGCCAGCGACACGCAGATGAAGCTGCTGTA...ACGCGCCCTTCTCCGGAAGGCTCTGGCCCCAAGCTGGCCGGCCCGCAGGAGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR GCA 90 bp | GGGCTCCTGCGGGCCGGCCAGCTTGGGGCCAGAGCCTTCCGGAGAAGGGCGCGTCACAAAAGGCAAATGTaGCCGCGGCACAGCCCGCCT | + |
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Preference number: 4 (lower is better) Translates to: GLLRAGQLGARAFRRRARHKRQM*PRHSPP Trigger: AGGCGGGCTGTGCCGCGGGCACATTTGCCTTTTGTG...ACGCGCCCTTCTCCGGAAGGCTCTGGCCCCAAGCTGGCCGGCCCGCAGGAGCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR CCA 90 bp | GGGGCGGACGACGGCGGGAAGGCGCTTCCCTACAGGCGAGAGGAGCAGGCTCGCAGCTTGGAGTTGGGCTaGTGCCGCGCGAACTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: GADDGGKALPYRREEQARSLELG*CRANSC Trigger: GCAGGAGTTCGCGCGGCACCAGCCCAACTCCAAGCT...GCGAGCCTGCTCCTCTCGCCTGTAGGGAAGCGCCTTCCCGCCGTCGTCCGCCCC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR CCA 90 bp | GCGTCCAAGCCCGGGGCGGACGACGGCGGGAAGGCGCTTCCCTACAGGCGAGAGAGCTTGGAGTTGGGCTaGTGCCGCGCGAACTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: ASKPGADDGGKALPYRRESLELG*CRANSC Trigger: GCAGGAGTTCGCGCGGCACCAGCCCAACTCCAAGCT...CTCTCGCCTGTAGGGAAGCGCCTTCCCGCCGTCGTCCGCCCCGGGCTTGGACGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR TCA 90 bp | CTCCTGCGGGCCGGCCAGCTTGGGGCCAGAGCCTTCCGGAGAAGGGCGCGTCCAGACGCCCGTCCGGGGTaGTCACTGTTTCCTATGAGG | + |
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Preference number: 4 (lower is better) Translates to: LLRAGQLGARAFRRRARPDARPG*SLFPMR Trigger: CCTCATAGGAAACAGTGATCACCCCGGACGGGCGTC...TGGACGCGCCCTTCTCCGGAAGGCTCTGGCCCCAAGCTGGCCGGCCCGCAGGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR CCA 90 bp | CACACATTCTCTGAGAATGGGGCTCCTGCGGGCCGGCCAGCTTGGGGCCAGAGCGCTGGGGGCCATGCCTaGCGCGGAACAGGCGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: HTFSENGAPAGRPAWGQSAGGHA*RGTGDE Trigger: CTCGTCGCCTGTTCCGCGCCAGGCATGGCCCCCAGC...GCTCTGGCCCCAAGCTGGCCGGCCCGCAGGAGCCCCATTCTCAGAGAATGTGTG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR CCA 90 bp | AATGGGGCTCCTGCGGGCCGGCCAGCTTGGGGCCAGAGCCTTCCGGAGAAGGGCTCATCTGCGTGTCGCTaGCGGCGTGGAGCGTCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NGAPAGRPAWGQSLPEKGSSACR*RRGASG Trigger: TCCTGACGCTCCACGCCGCCAGCGACACGCAGATGA...GCCCTTCTCCGGAAGGCTCTGGCCCCAAGCTGGCCGGCCCGCAGGAGCCCCATT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR TCA 90 bp | AAGGGCGCGTCCAAGCCCGGGGCGGACGACGGCGGGAAGGCGCTTCCCTACAGGAGCAGCTACGGGCCCTaGAGAAAGTCCTCTACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KGASKPGADDGGKALPYRSSYGP*RKSSTG Trigger: GCCTGTAGAGGACTTTCTTCAGGGCCCGTAGCTGCT...CCTGTAGGGAAGCGCCTTCCCGCCGTCGTCCGCCCCGGGCTTGGACGCGCCCTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR TCA 90 bp | CTTCACAAAAGGCAAATGTGCCCGCGGCACAGCCCGCCTGCCAGGGGTACGCCCCCAGACAGCCCACCGTaGGCCCCAGCCAGACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LHKRQMCPRHSPPARGTPPDSPP*APARPP Trigger: TGGTGGTCTGGCTGGGGCTCACGGTGGGCTGTCTGG...GGGCGTACCCCTGGCAGGCGGGCTGTGCCGCGGGCACATTTGCCTTTTGTGAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR GCA 90 bp | CTTCACAAAAGGCAAATGTGCCCGCGGCACAGCCCGCCTGCCAGGGGTACGCCCCAGTGCTGGGGGCCATaGCTGGCGCGGAACAGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LHKRQMCPRHSPPARGTPQCWGP*LARNRR Trigger: TCGCCTGTTCCGCGCCAGGCATGGCCCCCAGCACTG...GGGCGTACCCCTGGCAGGCGGGCTGTGCCGCGGGCACATTTGCCTTTTGTGAAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR CCA 90 bp | AGGCGCTTCCCTACAGGCGAGAGGAGCAGGCTCGCCCTCTGGTCGTCGGGCCGCCACTCAGGAGCCTTTTaGCCATGGCCCTCAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRFPTGERSRLALWSSGRHSGAF*PWPSGS Trigger: GGACCCTGAGGGCCATGGCCAAAAGGCTCCTGAGTG...GCGGCCCGACGACCAGAGGGCGAGCCTGCTCCTCTCGCCTGTAGGGAAGCGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR TCA 90 bp | AGGCGCTTCCCTACAGGCGAGAGGAGCAGGCTCGCCCTCTGGTCGTCGGGCCGCTGCACACACATTCTCTaGGAATGGGGCTCCTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: RRFPTGERSRLALWSSGRCTHIL*EWGSCG Trigger: CCCGCAGGAGCCCCATTCTCAGAGAATGTGTGTGCA...GCGGCCCGACGACCAGAGGGCGAGCCTGCTCCTCTCGCCTGTAGGGAAGCGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR CCA 90 bp | TCCCTACAGGCGAGAGGAGCAGGCTCGCCCTCTGGTCGTCGGGCCGCGCGCCCGATGGGGTCAGACACTTaGCAGAAGATGGGCCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: SLQARGAGSPSGRRAARPMGSDT*QKMGPD Trigger: ATCAGGGCCCATCTTCTGCCAAGTGTCTGACCCCAT...CGGGCGCGCGGCCCGACGACCAGAGGGCGAGCCTGCTCCTCTCGCCTGTAGGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR CCA 90 bp | GACGACGGCGGGAAGGCGCTTCCCTACAGGCGAGAGGAGCAGGCTCGCCCTCTGCACTCAGGAGCCTTTTaGCCATGGCCCTCAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DDGGKALPYRREEQARPLHSGAF*PWPSGS Trigger: GGACCCTGAGGGCCATGGCCAAAAGGCTCCTGAGTG...CAGAGGGCGAGCCTGCTCCTCTCGCCTGTAGGGAAGCGCCTTCCCGCCGTCGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR GCA 90 bp | CTTCACAAAAGGCAAATGTGCCCGCGGCACAGCCCGCCTGCCAGGGGTACGCCCTGGAGCGTCAGGAACTaGACGGCCTCCTGCAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LHKRQMCPRHSPPARGTPWSVRN*TASCRH Trigger: GTGCCTGCAGGAGGCCGTGCAGTTCCTGACGCTCCA...GGGCGTACCCCTGGCAGGCGGGCTGTGCCGCGGGCACATTTGCCTTTTGTGAAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR GCA 90 bp | AGGCGCTTCCCTACAGGCGAGAGGAGCAGGCTCGCCCTCTGGTCGTCGGGCCGCCTGAGTACAAAGTCGTaGCCACACGCATCCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RRFPTGERSRLALWSSGRLSTKS*PHASTH Trigger: GTGGGTGGATGCGTGTGGGCACGACTTTGTACTCAG...GCGGCCCGACGACCAGAGGGCGAGCCTGCTCCTCTCGCCTGTAGGGAAGCGCCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR TCA 90 bp | CTTCACAAAAGGCAAATGTGCCCGCGGCACAGCCCGCCTGCCAGGGGTACGCCCTTTTCTCTTTGGGGCTaGGCAGCTCCACGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: LHKRQMCPRHSPPARGTPFSLWG*AAPRPQ Trigger: CTGTGGCCGTGGAGCTGCTCAGCCCCAAAGAGAAAA...GGGCGTACCCCTGGCAGGCGGGCTGTGCCGCGGGCACATTTGCCTTTTGTGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR TCA 90 bp | CACACATTCTCTGAGAATGGGGCTCCTGCGGGCCGGCCAGCTTGGGGCCAGAGCAGCAGCTACGGGCCCTaGAGAAAGTCCTCTACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTFSENGAPAGRPAWGQSSSYGP*RKSSTG Trigger: GCCTGTAGAGGACTTTCTTCAGGGCCCGTAGCTGCT...GCTCTGGCCCCAAGCTGGCCGGCCCGCAGGAGCCCCATTCTCAGAGAATGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGGGTACGCCCAGCAGCTACGGGCCCTGAAGAAAGTCCTCTACAGGCTGGGGACGCCCGTCCGGGGTaGTCACTGTTTCCTATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGVRPAATGPEESPLQAGDARPG*SLFPMR Trigger: CCTCATAGGAAACAGTGATCACCCCGGACGGGCGTC...CCCAGCCTGTAGAGGACTTTCTTCAGGGCCCGTAGCTGCTGGGCGTACCCCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR GCA 90 bp | CATAGAACCCCGGGCGGCCGGGGACTTCCCAGAAGTCACTTGCTTAAATGCAAAGCGGCACAGCCCGCCTaGCAGGGGTACGCCCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HRTPGGRGLPRSHLLKCKAAQPA*QGYAQQ Trigger: CTGCTGGGCGTACCCCTGGCAGGCGGGCTGTGCCGC...TTTGCATTTAAGCAAGTGACTTCTGGGAAGTCCCCGGCCGCCCGGGGTTCTATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR GCA 90 bp | TTCGGCCTTCACAAAAGGCAAATGTGCCCGCGGCACAGCCCGCCTGCCAGGGGTCACAAAAGGCAAATGTaGCCGCGGCACAGCCCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: FGLHKRQMCPRHSPPARGHKRQM*PRHSPP Trigger: AGGCGGGCTGTGCCGCGGGCACATTTGCCTTTTGTG...ACCCCTGGCAGGCGGGCTGTGCCGCGGGCACATTTGCCTTTTGTGAAGGCCGAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR TCA 90 bp | AGTTCGGCCTTCACAAAAGGCAAATGTGCCCGCGGCACAGCCCGCCTGCCAGGGTTTTCTCTTTGGGGCTaGGCAGCTCCACGGCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: SSAFTKGKCARGTARLPGFSLWG*AAPRPQ Trigger: CTGTGGCCGTGGAGCTGCTCAGCCCCAAAGAGAAAA...CCCTGGCAGGCGGGCTGTGCCGCGGGCACATTTGCCTTTTGTGAAGGCCGAACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGCAAATGTGCCCGCGGCACAGCCCGCCTGCCAGGGGTACGCCCAGCAGCTTGTGCTTCAGGTAGCTaGCAGCCATCTCCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: KGKCARGTARLPGVRPAACASGS*QPSPGC Trigger: ACATCCTGGAGATGGCTGTCAGCTACCTGAAGCACA...AGCTGCTGGGCGTACCCCTGGCAGGCGGGCTGTGCCGCGGGCACATTTGCCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR CCA 90 bp | ACAGAGGAATCCTTTAAGGATCATAGTGGAGGCACCCACCCTCCCCAGACAGCCGCTGGGGGCCATGCCTaGCGCGGAACAGGCGACGAG | + |
|
Preference number: 4 (lower is better) Translates to: TEESFKDHSGGTHPPQTAAGGHA*RGTGDE Trigger: CTCGTCGCCTGTTCCGCGCCAGGCATGGCCCCCAGC...GGCTGTCTGGGGAGGGTGGGTGCCTCCACTATGATCCTTAAAGGATTCCTCTGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR CCA 90 bp | GAGGATACAGCTCGAGTTCGGCCTTCACAAAAGGCAAATGTGCCCGCGGCACAGGCGGCCGGGGGCCGCTaGAAGTGGTACAGCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EDTARVRPSQKANVPAAQAAGGR*KWYSSF Trigger: GAAGCTGCTGTACCACTTCCAGCGGCCCCCGGCCGC...CTGTGCCGCGGGCACATTTGCCTTTTGTGAAGGCCGAACTCGAGCTGTATCCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR CCA 90 bp | AAAGGCAAATGTGCCCGCGGCACAGCCCGCCTGCCAGGGGTACGCCCAGCAGCTATGGGGTCAGACACTTaGCAGAAGATGGGCCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KGKCARGTARLPGVRPAAMGSDT*QKMGPD Trigger: ATCAGGGCCCATCTTCTGCCAAGTGTCTGACCCCAT...AGCTGCTGGGCGTACCCCTGGCAGGCGGGCTGTGCCGCGGGCACATTTGCCTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR CCA 90 bp | TTGGGGCCAGAGCCTTCCGGAGAAGGGCGCGTCCAAGCCCGGGGCGGACGACGGAATCAGATTTTATTATaGCGGCTTCGGAGCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LGPEPSGEGRVQARGGRRNQILL*RLRSSP Trigger: GGGACTGCTCCGAAGCCGCCATAATAAAATCTGATT...CCGTCGTCCGCCCCGGGCTTGGACGCGCCCTTCTCCGGAAGGCTCTGGCCCCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR CCA 90 bp | AAGGGCGCGTCCAAGCCCGGGGCGGACGACGGCGGGAAGGCGCTTCCCTACAGGAATCAGATTTTATTATaGCGGCTTCGGAGCAGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: KGASKPGADDGGKALPYRNQILL*RLRSSP Trigger: GGGACTGCTCCGAAGCCGCCATAATAAAATCTGATT...CCTGTAGGGAAGCGCCTTCCCGCCGTCGTCCGCCCCGGGCTTGGACGCGCCCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR GCA 90 bp | AGTTCGGCCTTCACAAAAGGCAAATGTGCCCGCGGCACAGCCCGCCTGCCAGGGCTGAGTACAAAGTCGTaGCCACACGCATCCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SSAFTKGKCARGTARLPGLSTKS*PHASTH Trigger: GTGGGTGGATGCGTGTGGGCACGACTTTGTACTCAG...CCCTGGCAGGCGGGCTGTGCCGCGGGCACATTTGCCTTTTGTGAAGGCCGAACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR CCA 90 bp | GAACAATCAGATTTTATTATGGCGGCTTCGGAGCAGTCCCGTGGCTTCCACGTGCCTGGTGCAGGCTCTTaGGGCCGGCGGCGGCGACGA | + |
|
Preference number: 4 (lower is better) Translates to: EQSDFIMAASEQSRGFHVPGAGS*GRRRRR Trigger: TCGTCGCCGCCGCCGGCCCCAAGAGCCTGCACCAGG...CACGTGGAAGCCACGGGACTGCTCCGAAGCCGCCATAATAAAATCTGATTGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR TCA 90 bp | CCAGGGGTACGCCCAGCAGCTACGGGCCCTGAAGAAAGTCCTCTACAGGCTGGGTGTGCTTCAGGTAGCTaGCAGCCATCTCCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: PGVRPAATGPEESPLQAGCASGS*QPSPGC Trigger: ACATCCTGGAGATGGCTGTCAGCTACCTGAAGCACA...CCCAGCCTGTAGAGGACTTTCTTCAGGGCCCGTAGCTGCTGGGCGTACCCCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR CCA 90 bp | GAGGATACAGCTCGAGTTCGGCCTTCACAAAAGGCAAATGTGCCCGCGGCACAGGGGGGCCGCTGGAAGTaGTACAGCAGCTTCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: EDTARVRPSQKANVPAAQGGRWK*YSSFIC Trigger: GCAGATGAAGCTGCTGTACCACTTCCAGCGGCCCCC...CTGTGCCGCGGGCACATTTGCCTTTTGTGAAGGCCGAACTCGAGCTGTATCCTC 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR CCA 90 bp | CTGAACAATCAGATTTTATTATGGCGGCTTCGGAGCAGTCCCGTGGCTTCCACGTGGCCCTCAGGGTCCTaGACGCCCGTCCGGGGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LNNQILLWRLRSSPVASTWPSGS*TPVRGD Trigger: ATCACCCCGGACGGGCGTCCAGGACCCTGAGGGCCA...CGTGGAAGCCACGGGACTGCTCCGAAGCCGCCATAATAAAATCTGATTGTTCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR GCA 90 bp | ATTATGGCGGCTTCGGAGCAGTCCCGTGGCTTCCACGTGACTGAGAGTTCAATTTTGGAGTTGGGCTGGTaGCGCGCGAACTCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IMAASEQSRGFHVTESSILELGW*RANSCS Trigger: GGAGCAGGAGTTCGCGCGGCACCAGCCCAACTCCAA...AATTGAACTCTCAGTCACGTGGAAGCCACGGGACTGCTCCGAAGCCGCCATAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR GCA 90 bp | CATAGAACCCCGGGCGGCCGGGGACTTCCCAGAAGTCACTTGCTTAAATGCAAATACAGCAGCTTCATCTaGGTGTCGCTGGCGGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HRTPGGRGLPRSHLLKCKYSSFI*VSLAAW Trigger: CCACGCCGCCAGCGACACGCAGATGAAGCTGCTGTA...TTTGCATTTAAGCAAGTGACTTCTGGGAAGTCCCCGGCCGCCCGGGGTTCTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR CCA 90 bp | GAACAATCAGATTTTATTATGGCGGCTTCGGAGCAGTCCCGTGGCTTCCACGTGGTGTCGCTGGCGGCGTaGAGCGTCAGGAACTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: EQSDFIMAASEQSRGFHVVSLAA*SVRNCT Trigger: CGTGCAGTTCCTGACGCTCCACGCCGCCAGCGACAC...CACGTGGAAGCCACGGGACTGCTCCGAAGCCGCCATAATAAAATCTGATTGTTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR CCA 90 bp | ACCCACACAGAGGAATCCTTTAAGGATCATAGTGGAGGCACCCACCCTCCCCAGGGGGGCCGCTGGAAGTaGTACAGCAGCTTCATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: THTEESFKDHSGGTHPPQGGRWK*YSSFIC Trigger: GCAGATGAAGCTGCTGTACCACTTCCAGCGGCCCCC...CTGGGGAGGGTGGGTGCCTCCACTATGATCCTTAAAGGATTCCTCTGTGTGGGT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR CCA 90 bp | TCCACCCACACAGAGGAATCCTTTAAGGATCATAGTGGAGGCACCCACCCTCCCCACAGAACAACCCCATaGGGTCAGACACTTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: STHTEESFKDHSGGTHPPHRTTP*GQTLGR Trigger: TCTGCCAAGTGTCTGACCCCATGGGGTTGTTCTGTG...GGGAGGGTGGGTGCCTCCACTATGATCCTTAAAGGATTCCTCTGTGTGGGTGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR GCA 90 bp | ACTGTTTCCTATGAGGATACAGCTCGAGTTCGGCCTTCACAAAAGGCAAATGTGCTGGGGGCAGCAGTGTaGGAGCCCCGGCACTACAAA | + |
|
Preference number: 4 (lower is better) Translates to: TVSYEDTARVRPSQKANVLGAAV*EPRHYK Trigger: TTTGTAGTGCCGGGGCTCGCACACTGCTGCCCCCAG...CACATTTGCCTTTTGTGAAGGCCGAACTCGAGCTGTATCCTCATAGGAAACAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR CCA 90 bp | CATCCACCCACACAGAGGAATCCTTTAAGGATCATAGTGGAGGCACCCACCCTCCACAGAACAACCCCATaGGGTCAGACACTTGGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: HPPTQRNPLRIIVEAPTLHRTTP*GQTLGR Trigger: TCTGCCAAGTGTCTGACCCCATGGGGTTGTTCTGTG...GAGGGTGGGTGCCTCCACTATGATCCTTAAAGGATTCCTCTGTGTGGGTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS-3UTR CCA 90 bp | ATTATGGCGGCTTCGGAGCAGTCCCGTGGCTTCCACGTGACTGAGAGTTCAATTACACTTGGCAGAAGATaGGCCCTGATTGTCCTAAAA | + |
|
Preference number: 4 (lower is better) Translates to: IMAASEQSRGFHVTESSITLGRR*ALIVLK Trigger: TTTTAGGACAATCAGGGCCCATCTTCTGCCAAGTGT...AATTGAACTCTCAGTCACGTGGAAGCCACGGGACTGCTCCGAAGCCGCCATAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS CCA 90 bp | GCGGGAAGGCGCTTCCCTACAGGCGAGAGGAGCAGGCTCGCCCTCTaGTCGTCGGGCCGCGCGCCCGCAGGTCCCGCCGGGTCACCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: AGRRFPTGERSRLAL*SSGRAPAGPAGSPG Trigger: CCCTGGTGACCCGGCGGGACCTGCGGGCGCGCGGCCCGACGACCAGAGGGCGAGCCTGCTCCTCTCGCCTGTAGGGAAGCGCCTTCCCGC 77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000378453.4 ENST00000612705.2 ENST00000627397.1 |
||
| CDS CCA 90 bp | GGCTCCTTGGCGGGCGCGGCGGGCGCGGCCGGGGGCCGCTGGAAGTaGTACAGCAGCTTCATCTGCGTGTCGCTGGCGGCGTGGAGCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GSLAGAAGAAGGRWK*YSSFICVSLAAWSV Trigger: GACGCTCCACGCCGCCAGCGACACGCAGATGAAGCTGCTGTACCACTTCCAGCGGCCCCCGGCCGCGCCCGCCGCGCCCGCCAAGGAGCC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000378453.4 ENST00000612705.2 ENST00000627397.1 |
||
| CDS CCA 90 bp | GCCTTGGGCTCCTTGGCGGGCGCGGCGGGCGCGGCCGGGGGCCGCTaGAAGTGGTACAGCAGCTTCATCTGCGTGTCGCTGGCGGCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ALGSLAGAAGAAGGR*KWYSSFICVSLAAW Trigger: CCACGCCGCCAGCGACACGCAGATGAAGCTGCTGTACCACTTCCAGCGGCCCCCGGCCGCGCCCGCCGCGCCCGCCAAGGAGCCCAAGGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000378453.4 ENST00000612705.2 ENST00000627397.1 |
||
| CDS-3UTR CAA 90 bp | GAGCCTTCCGGAGAAGGGCGCGTCCAAGCCCGGGGCGGACGACGGCGGGAAGGCTGCGGGCCGGCCAGCTaGGGGCCAGAGCCTTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: EPSGEGRVQARGGRRREGCGPAS*GPEPSG Trigger: TCCGGAAGGCTCTGGCCCCAAGCTGGCCGGCCCGCA...GCCTTCCCGCCGTCGTCCGCCCCGGGCTTGGACGCGCCCTTCTCCGGAAGGCTC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS GCA 90 bp | GCGGGCGCGGCCGGGGGCCGCTGGAAGTGGTACAGCAGCTTCATCTaGGTGTCGCTGGCGGCGTGGAGCGTCAGGAACTGCACGGCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: AGAAGGRWKWYSSFI*VSLAAWSVRNCTAS Trigger: GGAGGCCGTGCAGTTCCTGACGCTCCACGCCGCCAGCGACACGCAGATGAAGCTGCTGTACCACTTCCAGCGGCCCCCGGCCGCGCCCGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000378453.4 ENST00000612705.2 ENST00000627397.1 |
||
| CDS-3UTR CAA 90 bp | CTTCACAAAAGGCAAATGTGCCCGCGGCACAGCCCGCCTGCCAGGGGTACGCCCTCCTGGTGCAGGCTCTaGGGGCCGGCGGCGGCGACG | + |
|
Preference number: 5 (lower is better) Translates to: LHKRQMCPRHSPPARGTPSWCRL*GPAAAT Trigger: CGTCGCCGCCGCCGGCCCCAAGAGCCTGCACCAGGA...GGGCGTACCCCTGGCAGGCGGGCTGTGCCGCGGGCACATTTGCCTTTTGTGAAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
||
| CDS CCA 90 bp | CCGGGGGCCGCTGGAAGTGGTACAGCAGCTTCATCTGCGTGTCGCTaGCGGCGTGGAGCGTCAGGAACTGCACGGCCTCCTGCAGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: PGAAGSGTAASSACR*RRGASGTARPPAGT Trigger: GGTGCCTGCAGGAGGCCGTGCAGTTCCTGACGCTCCACGCCGCCAGCGACACGCAGATGAAGCTGCTGTACCACTTCCAGCGGCCCCCGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000378453.4 ENST00000612705.2 ENST00000627397.1 |
||
| CDS-3UTR CAA 90 bp | GACGACGGCGGGAAGGCGCTTCCCTACAGGCGAGAGGAGCAGGCTCGCCCTCTGACACTCAGGAGCCTTTaGGCCATGGCCCTCAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: DDGGKALPYRREEQARPLTLRSL*AMALRV Trigger: GACCCTGAGGGCCATGGCCAAAAGGCTCCTGAGTGT...CAGAGGGCGAGCCTGCTCCTCTCGCCTGTAGGGAAGCGCCTTCCCGCCGTCGTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS CCA 90 bp | GCAGGCACCACGAGTAGCCTTCGCTGTAGTCCTGGTGCAGGCTCTTaGGGCCGGCGGCGGCGACGAAGGCTTTGCTGTGCTTCAGGTAGC | + |
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Preference number: 5 (lower is better) Translates to: AGTTSSLRCSPGAGS*GRRRRRRLCCASGS Trigger: GCTACCTGAAGCACAGCAAAGCCTTCGTCGCCGCCGCCGGCCCCAAGAGCCTGCACCAGGACTACAGCGAAGGCTACTCGTGGTGCCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR CAA 90 bp | AAAGGCAAATGTGCCCGCGGCACAGCCCGCCTGCCAGGGGTACGCCCAGCAGCTAGTCGGTTTTTCTCTTaGGGGCTGAGCAGCTCCACG | + |
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Preference number: 5 (lower is better) Translates to: KGKCARGTARLPGVRPAASRFFS*GLSSST Trigger: CGTGGAGCTGCTCAGCCCCAAAGAGAAAAACCGACT...AGCTGCTGGGCGTACCCCTGGCAGGCGGGCTGTGCCGCGGGCACATTTGCCTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR CAA 90 bp | CATCCACCCACACAGAGGAATCCTTTAAGGATCATAGTGGAGGCACCCACCCTCTCCTGGTGCAGGCTCTaGGGGCCGGCGGCGGCGACG | + |
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Preference number: 5 (lower is better) Translates to: HPPTQRNPLRIIVEAPTLSWCRL*GPAAAT Trigger: CGTCGCCGCCGCCGGCCCCAAGAGCCTGCACCAGGA...GAGGGTGGGTGCCTCCACTATGATCCTTAAAGGATTCCTCTGTGTGGGTGGATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR CAA 90 bp | GGCGCTTCCCTACAGGCGAGAGGAGCAGGCTCGCCCTCTGGTCGTCGGGCCGCGCTTCCCAGAAGTCACTaGCTTAAATGCAAACACAGA | + |
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Preference number: 5 (lower is better) Translates to: GASLQARGAGSPSGRRAALPRSH*LKCKHR Trigger: TCTGTGTTTGCATTTAAGCAAGTGACTTCTGGGAAG...CGCGGCCCGACGACCAGAGGGCGAGCCTGCTCCTCTCGCCTGTAGGGAAGCGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR CAA 90 bp | CATAGAACCCCGGGCGGCCGGGGACTTCCCAGAAGTCACTTGCTTAAATGCAAAACACTCAGGAGCCTTTaGGCCATGGCCCTCAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: HRTPGGRGLPRSHLLKCKTLRSL*AMALRV Trigger: GACCCTGAGGGCCATGGCCAAAAGGCTCCTGAGTGT...TTTGCATTTAAGCAAGTGACTTCTGGGAAGTCCCCGGCCGCCCGGGGTTCTATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR CAA 90 bp | GAGGATACAGCTCGAGTTCGGCCTTCACAAAAGGCAAATGTGCCCGCGGCACAGAGTCGGTTTTTCTCTTaGGGGCTGAGCAGCTCCACG | + |
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Preference number: 5 (lower is better) Translates to: EDTARVRPSQKANVPAAQSRFFS*GLSSST Trigger: CGTGGAGCTGCTCAGCCCCAAAGAGAAAAACCGACT...CTGTGCCGCGGGCACATTTGCCTTTTGTGAAGGCCGAACTCGAGCTGTATCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS-3UTR CAA 90 bp | ATTATGGCGGCTTCGGAGCAGTCCCGTGGCTTCCACGTGACTGAGAGTTCAATTCTTCCCAGAAGTCACTaGCTTAAATGCAAACACAGA | + |
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Preference number: 5 (lower is better) Translates to: IMAASEQSRGFHVTESSILPRSH*LKCKHR Trigger: TCTGTGTTTGCATTTAAGCAAGTGACTTCTGGGAAG...AATTGAACTCTCAGTCACGTGGAAGCCACGGGACTGCTCCGAAGCCGCCATAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS CCA 72 bp | GAGCAGCTCCACGGCCACAGTGCTGGGGGCCATGCCTaGCGCGGAACAGGCGACGAGGCGACGCGGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: EQLHGHSAGGHA*RGTGDEATRGG Trigger: GCCTCCCCGCGTCGCCTCGTCGCCTGTTCCGCGCCAGGCATGGCCCCCAGCACTGTGGCCGTGGAGCTGCTC 75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000378453.4 ENST00000612705.2 ENST00000627397.1 |
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| CDS CCA 72 bp | TCCTTGGCGGGCGCGGCGGGCGCGGCCGGGGGCCGCTaGAAGTGGTACAGCAGCTTCATCTGCGTGTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: SLAGAAGAAGGR*KWYSSFICVSL Trigger: CAGCGACACGCAGATGAAGCTGCTGTACCACTTCCAGCGGCCCCCGGCCGCGCCCGCCGCGCCCGCCAAGGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000378453.4 ENST00000612705.2 ENST00000627397.1 |
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| CDS GCA 72 bp | GCCGGGGGCCGCTGGAAGTGGTACAGCAGCTTCATCTaGGTGTCGCTGGCGGCGTGGAGCGTCAGGAACTGC | + |
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Preference number: 6 (lower is better) Translates to: AGGRWKWYSSFI*VSLAAWSVRNC Trigger: GCAGTTCCTGACGCTCCACGCCGCCAGCGACACGCAGATGAAGCTGCTGTACCACTTCCAGCGGCCCCCGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENST00000378453.4 ENST00000612705.2 ENST00000627397.1 |
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| CDS CCA 72 bp | ACGAGTAGCCTTCGCTGTAGTCCTGGTGCAGGCTCTTaGGGCCGGCGGCGGCGACGAAGGCTTTGCTGTGCT | + |
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Preference number: 6 (lower is better) Translates to: TSSLRCSPGAGS*GRRRRRRLCCA Trigger: AGCACAGCAAAGCCTTCGTCGCCGCCGCCGGCCCCAAGAGCCTGCACCAGGACTACAGCGAAGGCTACTCGT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS CCA 72 bp | TGGTACAGCAGCTTCATCTGCGTGTCGCTGGCGGCGTaGAGCGTCAGGAACTGCACGGCCTCCTGCAGGCAC | + |
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Preference number: 6 (lower is better) Translates to: WYSSFICVSLAA*SVRNCTASCRH Trigger: GTGCCTGCAGGAGGCCGTGCAGTTCCTGACGCTCCACGCCGCCAGCGACACGCAGATGAAGCTGCTGTACCA 65% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000378453.4 ENST00000612705.2 ENST00000627397.1 |
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| CDS GCA 72 bp | TCCAGCTTGGAGTTGGGCTGGTGCCGCGCGAACTCCTaGTCCAGCAGCAGCTTCAGCTGCTCGATGCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: SSLELGWCRANS*SSSSFSCSMLL Trigger: CAGCAGCATCGAGCAGCTGAAGCTGCTGCTGGAGCAGGAGTTCGCGCGGCACCAGCCCAACTCCAAGCTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000378453.4 ENST00000612705.2 ENST00000627397.1 |
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| CDS CCA 72 bp | GCTGGAAGTGGTACAGCAGCTTCATCTGCGTGTCGCTaGCGGCGTGGAGCGTCAGGAACTGCACGGCCTCCT | + |
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Preference number: 6 (lower is better) Translates to: AGSGTAASSACR*RRGASGTARPP Trigger: AGGAGGCCGTGCAGTTCCTGACGCTCCACGCCGCCAGCGACACGCAGATGAAGCTGCTGTACCACTTCCAGC 64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000378453.4 ENST00000612705.2 ENST00000627397.1 |
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| CDS CAA 72 bp | TTCTCCACCACCGGCTTCCGCAGTCGGTTTTTCTCTTaGGGGCTGAGCAGCTCCACGGCCACAGTGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: FSTTGFRSRFFS*GLSSSTATVLG Trigger: CCCCAGCACTGTGGCCGTGGAGCTGCTCAGCCCCAAAGAGAAAAACCGACTGCGGAAGCCGGTGGTGGAGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000378453.4 ENST00000612705.2 |
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| CDS CAA 72 bp | CGCCGGGCGAGTCTGGTACTTACTCGGTTTTTCTCTTaGGGGCTGAGCAGCTCCACGGCCACAGTGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: RRASLVLTRFFS*GLSSSTATVLG Trigger: CCCCAGCACTGTGGCCGTGGAGCTGCTCAGCCCCAAAGAGAAAAACCGAGTAAGTACCAGACTCGCCCGGCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000627397.1 |
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