Pregenerated sensors for HES4 (Homo sapiens)
Ensembl gene IDs: ENSG00000188290Ensembl transcript IDs: ENST00000304952.11, ENST00000428771.6, ENST00000481869.1, ENST00000484667.2
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATGCAGTCTCAGGGCCAAGCGCGGCCGTCACCTaGACGCGACGCAGGCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: AKATALERGAASDAVSGPSAAVT*TRRRLR Trigger: GCGGAGCCTGCGTCGCGTGCAGGTGACGGCCGCGCT...TGGCCCTGAGACTGCATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR CCA 90 bp | CTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATGCAGTCTCAGGTGTCTGGGGTCCGGCTaGCGCTGGCCGGCGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: LGKGHGPRTGRRLRCSLRCLGSG*RWPALL Trigger: CAGGAGCGCCGGCCAGCGCCAGCCGGACCCCAGACA...CCTGAGACTGCATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR CCA 90 bp | GCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATGCAGTCTCAGGGCCACGGGAGGGTCCCAGCTaGCGCAGGCAGGCTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: AKATALERGAASDAVSGPREGPS*RRQAAR Trigger: CCTGGCAGCCTGCCTGCGCCAGCTGGGACCCTCCCG...TGGCCCTGAGACTGCATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR CCA 90 bp | CTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATGCAGTCTCAGGCGGGAGGGTCCCAGCTaGCGCAGGCAGGCTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LGKGHGPRTGRRLRCSLRREGPS*RRQAAR Trigger: CCTGGCAGCCTGCCTGCGCCAGCTGGGACCCTCCCG...CCTGAGACTGCATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR GCA 90 bp | AAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATGCAGTCTCAGGGCCACAGTTTCCCCGGCGTGTCTaGGGCCATGGTGCGCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: KATALERGAASDAVSGPQFPRRV*GHGAPR Trigger: GCGGGGCGCACCATGGCCGCAGACACGCCGGGGAAA...CTGTGGCCCTGAGACTGCATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000304952.11 ENST00000428771.6 |
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| CDS-3UTR CCA 90 bp | GTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATGCAGTCTCAGCTCCGGGGCTTGTCTaGGGTCCGGCTGGCGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: VSAKATALERGAASDAVSAPGLV*GPAGAG Trigger: GCCAGCGCCAGCCGGACCCCAGACAAGCCCCGGAGC...TGAGACTGCATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGAC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR CCA 90 bp | GCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATGCAGCTCCGGGGCTTGTCTaGGGTCCGGCTGGCGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: ATVSAKATALERGAASDAAPGLV*GPAGAG Trigger: GCCAGCGCCAGCCGGACCCCAGACAAGCCCCGGAGC...TGCATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR GCA 90 bp | GTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATGCAGTCTCATTTCCCCGGCGTGTCTaGGGCCATGGTGCGCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: VSAKATALERGAASDAVSFPRRV*GHGAPR Trigger: GCGGGGCGCACCATGGCCGCAGACACGCCGGGGAAA...TGAGACTGCATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGAC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000304952.11 ENST00000428771.6 |
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| CDS-3UTR GCA 90 bp | CTCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATTGGAGGACTTGCGGTaGTCGGCCGCGCTCCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LCYSLGKGHGPRTGRRLRLEDLR*SAALRG Trigger: GCCCCGGAGCGCGGCCGAGCACCGCAAGTCCTCCAA...TCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304952.11 |
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| CDS-3UTR GCA 90 bp | TCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATAGCGCGGCCGTCACCTaGACGCGACGCAGGCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: SATVSAKATALERGAASDSAAVT*TRRRLR Trigger: GCGGAGCCTGCGTCGCGTGCAGGTGACGGCCGCGCT...ATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR GCA 90 bp | GCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATGCAGGGCGCCGCCTCCGATaGAGTCTCAGGGCCACAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ATVSAKATALERGAASDAGRRLR*SLRATA Trigger: GGCTGTGGCCCTGAGACTGCATCGGAGGCGGCGCCC...TGCATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR CCA 90 bp | TACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATGCAGTGCTCCGGGGCTTGTCTaGGGTCCGGCTGGCGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: YSLGKGHGPRTGRRLRCSAPGLV*GPAGAG Trigger: GCCAGCGCCAGCCGGACCCCAGACAAGCCCCGGAGC...ACTGCATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR TCA 90 bp | CTCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGACCGCCGCGGGGTGTGTaGACCCGGCTCCGCATTCTT | + |
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Preference number: 4 (lower is better) Translates to: LCYSLGKGHGPRTGRRLRPPRGV*TRLRIL Trigger: AAGAATGCGGAGCCGGGTTCACACACCCCGCGGCGG...TCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428771.6 |
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| CDS-3UTR TCA 90 bp | GTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATGCAGTCTCAGGCGCCGCTTCTCCATaGCCGGCTTGGAGGACTGCG | + |
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Preference number: 4 (lower is better) Translates to: VSAKATALERGAASDAVSGAASP*PAWRTA Trigger: CGCAGTCCTCCAAGCCGGTCATGGAGAAGCGGCGCC...TGAGACTGCATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGAC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000428771.6 |
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| CDS-3UTR GCA 90 bp | TCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATGGGCGCCGCCTCCGATaGAGTCTCAGGGCCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: SATVSAKATALERGAASDGRRLR*SLRATA Trigger: GGCTGTGGCCCTGAGACTGCATCGGAGGCGGCGCCC...ATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR CCA 90 bp | GCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATGCAGTCTCAGGGCCATCCGCCAGACACTCGTaGAAGCCGGCGCGGTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: AKATALERGAASDAVSGPSARHS*KPARYL Trigger: CAAGTACCGCGCCGGCTTCCACGAGTGTCTGGCGGA...TGGCCCTGAGACTGCATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR CCA 90 bp | TGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATGCTCCGCCAGACACTCGTaGAAGCCGGCGCGGTACTTG | + |
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Preference number: 4 (lower is better) Translates to: CYSLGKGHGPRTGRRLRCSARHS*KPARYL Trigger: CAAGTACCGCGCCGGCTTCCACGAGTGTCTGGCGGA...GCATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR GCA 90 bp | ATACGTTTTCTCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCTGTCTGCGGCCATGGTaGGCCCCGCGCCTCCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: IRFLCYSLGKGHGPRTGRCLRPW*APRLPV Trigger: CACGGGGAGGCGCGGGGCGCACCATGGCCGCAGACA...GCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAGAAAACGTAT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000304952.11 ENST00000428771.6 |
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| CDS-3UTR CCA 90 bp | TTCTCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCTCCGCCAGACACTCGTaGAAGCCGGCGCGGTACTTG | + |
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Preference number: 4 (lower is better) Translates to: FSATVSAKATALERGAASSARHS*KPARYL Trigger: CAAGTACCGCGCCGGCTTCCACGAGTGTCTGGCGGA...GGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR CCA 90 bp | ACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATGCAGTCTTCTCCAGCTTCGAGTaGCGGGAGCTCTTGCGGTGC | + |
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Preference number: 4 (lower is better) Translates to: TVSAKATALERGAASDAVFSSFE*RELLRC Trigger: GCACCGCAAGAGCTCCCGCCACTCGAAGCTGGAGAA...GACTGCATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484667.2 |
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| CDS-3UTR GCA 90 bp | ATACGTTTTCTCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCAGCCGGCGCGGTACTTaGCCAGAACGGCGGGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: IRFLCYSLGKGHGPRTGRSRRGT*PERRGR Trigger: CCGACCCCGCCGTTCTGGGCAAGTACCGCGCCGGCT...GCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAGAAAACGTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR GCA 90 bp | AAATACGTTTTCTCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCAGCGCGGCCGTCACCTaGACGCGACGCAGGCTCCGC | + |
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Preference number: 4 (lower is better) Translates to: KYVFSATVSAKATALERGSAAVT*TRRRLR Trigger: GCGGAGCCTGCGTCGCGTGCAGGTGACGGCCGCGCT...GCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAGAAAACGTATTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR CCA 90 bp | AAATACGTTTTCTCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCCGGGAGGGTCCCAGCTaGCGCAGGCAGGCTGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KYVFSATVSAKATALERGREGPS*RRQAAR Trigger: CCTGGCAGCCTGCCTGCGCCAGCTGGGACCCTCCCG...GCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAGAAAACGTATTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR GCA 90 bp | AAATACGTTTTCTCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGGGCGCCGCCTCCGATaGAGTCTCAGGGCCACAGCC | + |
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Preference number: 4 (lower is better) Translates to: KYVFSATVSAKATALERGGRRLR*SLRATA Trigger: GGCTGTGGCCCTGAGACTGCATCGGAGGCGGCGCCC...GCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAGAAAACGTATTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR CCA 90 bp | TCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATTTCTCCAGCTTCGAGTaGCGGGAGCTCTCTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: SATVSAKATALERGAASDFSSFE*RELSFL Trigger: CAGAAAAGAGAGCTCCCGCCACTCGAAGCTGGAGAA...ATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000304952.11 ENST00000428771.6 |
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| CDS-3UTR GCA 90 bp | AATAAATACGTTTTCTCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGTGTCTGCGGCCATGGTaGGCCCCGCGCCTCCCCGTG | + |
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Preference number: 4 (lower is better) Translates to: NKYVFSATVSAKATALERCLRPW*APRLPV Trigger: CACGGGGAGGCGCGGGGCGCACCATGGCCGCAGACA...CCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAGAAAACGTATTTATT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000304952.11 ENST00000428771.6 |
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| CDS-3UTR CCA 90 bp | TTTCTCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCTTCTCCAGCTTCGAGTaGCGGGAGCTCTCTTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: FLCYSLGKGHGPRTGRRLFSSFE*RELSFL Trigger: CAGAAAAGAGAGCTCCCGCCACTCGAAGCTGGAGAA...GAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAGAAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000304952.11 ENST00000428771.6 |
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| CDS-3UTR GCA 90 bp | AATAAATACGTTTTCTCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGAGCCGGCGCGGTACTTaGCCAGAACGGCGGGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: NKYVFSATVSAKATALERSRRGT*PERRGR Trigger: CCGACCCCGCCGTTCTGGGCAAGTACCGCGCCGGCT...CCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAGAAAACGTATTTATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR GCA 90 bp | TCTGGAATAATAAATACGTTTTCTCTGCTACAGTCTCGGCAAAGGCCACGGCCCAGCCGGCGCGGTACTTaGCCAGAACGGCGGGGTCGG | + |
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Preference number: 4 (lower is better) Translates to: SGIINTFSLLQSRQRPRPSRRGT*PERRGR Trigger: CCGACCCCGCCGTTCTGGGCAAGTACCGCGCCGGCT...GGGCCGTGGCCTTTGCCGAGACTGTAGCAGAGAAAACGTATTTATTATTCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428771.6 |
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| CDS-3UTR CCA 90 bp | TGGAATAATAAATACGTTTTCTCTGCTACAGTCTCGGCAAAGGCCACGGCCCTATGTCTGGGGTCCGGCTaGCGCTGGCCGGCGCTCCTG | + |
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Preference number: 4 (lower is better) Translates to: WNNKYVFSATVSAKATALCLGSG*RWPALL Trigger: CAGGAGCGCCGGCCAGCGCCAGCCGGACCCCAGACA...TAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAGAAAACGTATTTATTATTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000304952.11 ENST00000428771.6 |
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| CDS-3UTR TCA 90 bp | ATACGTTTTCTCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCATGAGGGTTTTGAGCTaGGCGAGGCTCTCGTTAATA | + |
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Preference number: 4 (lower is better) Translates to: IRFLCYSLGKGHGPRTGRMRVLS*ARLSLI Trigger: TATTAACGAGAGCCTCGCTCAGCTCAAAACCCTCAT...GCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAGAAAACGTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000304952.11 ENST00000428771.6 |
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| CDS-3UTR TCA 90 bp | AATAATAAATACGTTTTCTCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAAGGCGCCGCTTCTCCATaGCCGGCTTGGAGGACTTGC | + |
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Preference number: 4 (lower is better) Translates to: NNKYVFSATVSAKATALEGAASP*PAWRTC Trigger: GCAAGTCCTCCAAGCCGGTCATGGAGAAGCGGCGCC...TTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAGAAAACGTATTTATTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304952.11 |
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| CDS CCA 90 bp | CCTTGCGGTGCTCGGCCGCGCTCCGGGGCTTGTCTGGGGTCCGGCTaGCGCTGGCCGGCGCTCCTGCCATCGGCGAGGCGCTCGGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: PCGARPRSGACLGSG*RWPALLPSARRSVS Trigger: GGAAACCGAGCGCCTCGCCGATGGCAGGAGCGCCGGCCAGCGCCAGCCGGACCCCAGACAAGCCCCGGAGCGCGGCCGAGCACCGCAAGG 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000428771.6 ENST00000481869.1 |
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| CDS CCA 90 bp | ACTTGCGGTGCTCGGCCGCGCTCCGGGGCTTGTCTGGGGTCCGGCTaGCGCTGGCCGGCGCTCCTGCCATCGGCGAGGCGCTCGGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: TCGARPRSGACLGSG*RWPALLPSARRSVS Trigger: GGAAACCGAGCGCCTCGCCGATGGCAGGAGCGCCGGCCAGCGCCAGCCGGACCCCAGACAAGCCCCGGAGCGCGGCCGAGCACCGCAAGT 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304952.11 |
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| CDS CCA 90 bp | TCTTGCGGTGCTCGGCCGCGCTCCGGGGCTTGTCTGGGGTCCGGCTaGCGCTGGCCGGCGCTCCTGCCATCGGCGAGGCGCTCGGTTTCC | + |
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Preference number: 5 (lower is better) Translates to: SCGARPRSGACLGSG*RWPALLPSARRSVS Trigger: GGAAACCGAGCGCCTCGCCGATGGCAGGAGCGCCGGCCAGCGCCAGCCGGACCCCAGACAAGCCCCGGAGCGCGGCCGAGCACCGCAAGA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484667.2 |
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| CDS CCA 90 bp | CCCTCGCAGCCGGCCAGGAAGCGGTTCACCTCCGCCAGACACTCGTaGAAGCCGGCGCGGTACTTGCCCAGAACGGCGGGGTCGGCGCTG | + |
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Preference number: 5 (lower is better) Translates to: PSQPARKRFTSARHS*KPARYLPRTAGSAL Trigger: CAGCGCCGACCCCGCCGTTCTGGGCAAGTACCGCGCCGGCTTCCACGAGTGTCTGGCGGAGGTGAACCGCTTCCTGGCCGGCTGCGAGGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000481869.1 ENST00000484667.2 |
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| CDS-3UTR CAA 90 bp | CTCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGAAAGCCGGCGCGGTACTaGCCCAGAACGGCGGGGTCG | + |
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Preference number: 5 (lower is better) Translates to: LCYSLGKGHGPRTGRRLRKPARY*PRTAGS Trigger: CGACCCCGCCGTTCTGGGCAAGTACCGCGCCGGCTT...TCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR CAA 90 bp | AGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATGCAGTCTCAAGCCGGCGCGGTACTaGCCCAGAACGGCGGGGTCG | + |
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Preference number: 5 (lower is better) Translates to: SLGKGHGPRTGRRLRCSLKPARY*PRTAGS Trigger: CGACCCCGCCGTTCTGGGCAAGTACCGCGCCGGCTT...GAGACTGCATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS-3UTR CAA 90 bp | TACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATGCAGTGAGTGGCGGGAGCTCTaGCGGTGCTCGGCCGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: YSLGKGHGPRTGRRLRCSEWREL*RCSAAL Trigger: GAGCGCGGCCGAGCACCGCAAGAGCTCCCGCCACTC...ACTGCATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000484667.2 |
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| CDS-3UTR CAA 90 bp | CGTTTTCTCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCACCGGCTTGGAGGACTaGCGGTGCTCGGCCGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: RFLCYSLGKGHGPRTGRRTGLED*RCSAAL Trigger: GAGCGCGGCCGAGCACCGCAAGTCCTCCAAGCCGGT...GCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAGAAAACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304952.11 |
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| CDS-3UTR CAA 90 bp | CGTTTTCTCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCTTCTCCATGACCGGCTaGGAGGACTGCGGGTCGGGC | + |
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Preference number: 5 (lower is better) Translates to: RFLCYSLGKGHGPRTGRRFSMTG*EDCGSG Trigger: GCCCGACCCGCAGTCCTCCAAGCCGGTCATGGAGAA...GCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAGAAAACG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000428771.6 |
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| CDS-3UTR CAA 90 bp | TCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATTTCTCCATGACCGGCTaGGAGGACTTGCGGTGCTCG | + |
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Preference number: 5 (lower is better) Translates to: SATVSAKATALERGAASDFSMTG*EDLRCS Trigger: CGAGCACCGCAAGTCCTCCAAGCCGGTCATGGAGAA...ATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000304952.11 |
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| CDS-3UTR CAA 90 bp | AAATACGTTTTCTCTGCTACAGTCTCGGCAAAGGCCACGGCCCTAGAACGGGGCAAGCCGGCGCGGTACTaGCCCAGAACGGCGGGGTCG | + |
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Preference number: 5 (lower is better) Translates to: KYVFSATVSAKATALERGKPARY*PRTAGS Trigger: CGACCCCGCCGTTCTGGGCAAGTACCGCGCCGGCTT...GCCCCGTTCTAGGGCCGTGGCCTTTGCCGAGACTGTAGCAGAGAAAACGTATTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000484667.2 |
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| CDS CAA 90 bp | TTCGAGTGGCGGGAGCTCTTGCGGTGCTCGGCCGCGCTCCGGGGCTaGTCTGGGGTCCGGCTGGCGCTGGCCGGCGCTCCTGCCATCGGC | + |
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Preference number: 6 (lower is better) Translates to: FEWRELLRCSAALRG*SGVRLALAGAPAIG Trigger: GCCGATGGCAGGAGCGCCGGCCAGCGCCAGCCGGACCCCAGACAAGCCCCGGAGCGCGGCCGAGCACCGCAAGAGCTCCCGCCACTCGAA 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000484667.2 |
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| CDS GCA 72 bp | CTTGTCTGGGGTCCGGCTGGCGCTGGCCGGCGCTCCTaGCATCGGCGAGGCGCTCGGTTTCCCCGGCGTGTC | + |
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Preference number: 6 (lower is better) Translates to: LVWGPAGAGRRS*HRRGARFPRRV Trigger: GACACGCCGGGGAAACCGAGCGCCTCGCCGATGGCAGGAGCGCCGGCCAGCGCCAGCCGGACCCCAGACAAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000481869.1 ENST00000484667.2 |
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| CDS CAA 90 bp | ATGACCGGCTTGGAGGACTTGCGGTGCTCGGCCGCGCTCCGGGGCTaGTCTGGGGTCCGGCTGGCGCTGGCCGGCGCTCCTGCCATCGGC | + |
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Preference number: 6 (lower is better) Translates to: MTGLEDLRCSAALRG*SGVRLALAGAPAIG Trigger: GCCGATGGCAGGAGCGCCGGCCAGCGCCAGCCGGACCCCAGACAAGCCCCGGAGCGCGGCCGAGCACCGCAAGTCCTCCAAGCCGGTCAT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000304952.11 |
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| CDS GCA 72 bp | TCTGGGGGCGGGGATAGGCGGGAGGTCCAGGTCAGCTaGGACCCAGACTCCGGGTCTCGGGCCTTCGCCCCC | + |
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Preference number: 6 (lower is better) Translates to: SGGGDRREVQVS*DPDSGSRAFAP Trigger: GGGGGCGAAGGCCCGAGACCCGGAGTCTGGGTCGCAGCTGACCTGGACCTCCCGCCTATCCCCGCCCCCAGA 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000481869.1 |
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| CDS CAA 72 bp | ACCTCCGCCAGACACTCGTGGAAGCCGGCGCGGTACTaGCCCAGAACGGCGGGGTCGGCGCTGAGCGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: TSARHSWKPARY*PRTAGSALSAA Trigger: GGCCGCGCTCAGCGCCGACCCCGCCGTTCTGGGCAAGTACCGCGCCGGCTTCCACGAGTGTCTGGCGGAGGT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000481869.1 ENST00000484667.2 |
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| CDS CAA 90 bp | AAGCGGTTCACCTCCGCCAGACACTCGTGGAAGCCGGCGCGGTACTaGCCCAGAACGGCGGGGTCGGCGCTGAGCGCGGCCGTCACCTGC | + |
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Preference number: 6 (lower is better) Translates to: KRFTSARHSWKPARY*PRTAGSALSAAVTC Trigger: GCAGGTGACGGCCGCGCTCAGCGCCGACCCCGCCGTTCTGGGCAAGTACCGCGCCGGCTTCCACGAGTGTCTGGCGGAGGTGAACCGCTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000481869.1 ENST00000484667.2 |
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| CDS GCA 72 bp | AAAGGCCACGGCCCTAGAACGGGGCGCCGCCTCCGATaGAGTCTCAGGGCCACAGCCTCAGCGCAGCCACGG | + |
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Preference number: 6 (lower is better) Translates to: KGHGPRTGRRLR*SLRATASAQPR Trigger: CCGTGGCTGCGCTGAGGCTGTGGCCCTGAGACTGCATCGGAGGCGGCGCCCCGTTCTAGGGCCGTGGCCTTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000481869.1 ENST00000484667.2 |
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| CDS CCA 72 bp | CCGGCCAGGAAGCGGTTCACCTCCGCCAGACACTCGTaGAAGCCGGCGCGGTACTTGCCCAGAACGGCGGGG | + |
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Preference number: 6 (lower is better) Translates to: PARKRFTSARHS*KPARYLPRTAG Trigger: CCCCGCCGTTCTGGGCAAGTACCGCGCCGGCTTCCACGAGTGTCTGGCGGAGGTGAACCGCTTCCTGGCCGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000481869.1 ENST00000484667.2 |
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| CDS TCA 72 bp | TCTTTTCTGAGGGCGTCCAGGATGAGGGTTTTGAGCTaGGCGAGGCTCTCGTTAATACGCGCTCGGCGCCGC | + |
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Preference number: 6 (lower is better) Translates to: SFLRASRMRVLS*ARLSLIRARRR Trigger: GCGGCGCCGAGCGCGTATTAACGAGAGCCTCGCTCAGCTCAAAACCCTCATCCTGGACGCCCTCAGAAAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000304952.11 ENST00000428771.6 ENST00000481869.1 |
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