RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HES2 (Homo sapiens)

Ensembl gene IDs: ENSG00000069812

Ensembl transcript IDs: ENST00000377834.8, ENST00000377836.8, ENST00000377837.5, ENST00000471190.1, ENST00000487437.5, ENST00000489730.1

Found 367 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTaGATCGGCCGAGGGGCTACCACGGCCGCCAGAGGCCAGGGCCGC +
Preference number: 1 (lower is better)
Translates to: QPVQCPKVPSSRQGL*IGRGATTAARGQGR
Trigger: GCGGCCCTGGCCTCTGGCGGCCGTGGTAGCCCCTCGGCCGATCCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487437.5
3UTR GCA 90 bp GTCTGGTGCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTaGGGGGTCCAGTTCCAGAACTATCTCCACCAGCTGGGATGGGGG +
Preference number: 1 (lower is better)
Translates to: VWCQCWGGCVGCPRS*GVQFQNYLHQLGWG
Trigger: CCCCCATCCCAGCTGGTGGAGATAGTTCTGGAACTGGACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGCACCAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR CCA 90 bp GCTCAGCCCCAGCCTCGCCCTCCGGGAGCTTACAGTCTAACCCTCTaGGCACAGGGAGGTGGGAAGATGGCACGGCCTTGCTGGGAGCCT +
Preference number: 1 (lower is better)
Translates to: AQPQPRPPGAYSLTL*AQGGGKMARPCWEP
Trigger: AGGCTCCCAGCAAGGCCGTGCCATCTTCCCACCTCCCTGTGCCCAGAGGGTTAGACTGTAAGCTCCCGGAGGGCGAGGCTGGGGCTGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR GCA 90 bp GCCCGGCTTGGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTaGACACACCCCTGCGGAGAAACTCTGCCTTCTTGCCTGGGGCCC +
Preference number: 1 (lower is better)
Translates to: ARLGEPAETFCAASS*THPCGETLPSCLGP
Trigger: GGGCCCCAGGCAAGAAGGCAGAGTTTCTCCGCAGGGGTGTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCCAAGCCGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 90 bp CAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCTGGGTGTaGGTACTGGGCTGGCCCCTAATGATGGGAACAGCAGCCGCCACC +
Preference number: 1 (lower is better)
Translates to: QSATPVTNSRLPAWV*VLGWPLMMGTAAAT
Trigger: GGTGGCGGCTGCTGTTCCCATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR CCA 90 bp GGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCTaGGTGTGGGTACTGGGCTGGCCCCTAATGATGGGAACAGCAGCC +
Preference number: 1 (lower is better)
Translates to: GFQSATPVTNSRLPA*VWVLGWPLMMGTAA
Trigger: GGCTGCTGTTCCCATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR CCA 90 bp AAAAGCCCACCGCCCTGCGTTCACCTTTGCCCATCAGATAGGGCTTaGGGGGCACCTGAGGAGGAGGTGCCTGCCACTGCCTGTGGAGGA +
Preference number: 1 (lower is better)
Translates to: KSPPPCVHLCPSDRA*GAPEEEVPATACGG
Trigger: TCCTCCACAGGCAGTGGCAGGCACCTCCTCCTCAGGTGCCCCCCAAGCCCTATCTGATGGGCAAAGGTGAACGCAGGGCGGTGGGCTTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR GCA 90 bp GAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTGCACACACCCCTaGGGAGAAACTCTGCCTTCTTGCCTGGGGCCCAGAACCTTACCC +
Preference number: 1 (lower is better)
Translates to: EPAETFCAASSCTHP*GETLPSCLGPRTLP
Trigger: GGGTAAGGTTCTGGGCCCCAGGCAAGAAGGCAGAGTTTCTCCGCAGGGGTGTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 90 bp CTAGCTCTTGCACACACCCCTGCGGAGAAACTCTGCCTTCTTGCCTaGGGCCCAGAACCTTACCCACCCAGGCTTGCCCCCTCCCTTCCA +
Preference number: 1 (lower is better)
Translates to: LALAHTPAEKLCLLA*GPEPYPPRLAPSLP
Trigger: TGGAAGGGAGGGGGCAAGCCTGGGTGGGTAAGGTTCTGGGCCCCAGGCAAGAAGGCAGAGTTTCTCCGCAGGGGTGTGTGCAAGAGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 90 bp GCACCTGAGGAGGAGGTGCCTGCCACTGCCTGTGGAGGAGGATGTTaGCGTTCCTATTTCACAAGCCCGGCTTGGAGAGCCAGCGGAGAC +
Preference number: 1 (lower is better)
Translates to: APEEEVPATACGGGC*RSYFTSPAWRASGD
Trigger: GTCTCCGCTGGCTCTCCAAGCCGGGCTTGTGAAATAGGAACGCCAACATCCTCCTCCACAGGCAGTGGCAGGCACCTCCTCCTCAGGTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR GCA 90 bp AATGATGGGAACAGCAGCCGCCACCAAGAGCTTCAACCTGTCCAGTaGCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGATCGGCCGA +
Preference number: 1 (lower is better)
Translates to: NDGNSSRHQELQPVQ*PKVPSSRQGLWIGR
Trigger: TCGGCCGATCCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGCGGCTGCTGTTCCCATCATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR GCA 90 bp ACCTGCTCCATCCCTCAAATTCCTGCTGCTCCATGGCAGGGGCCCTaGTCACCCCACATTGGCACAGACTCTGCTGGAGTCAGATCCTCC +
Preference number: 1 (lower is better)
Translates to: TCSIPQIPAAPWQGP*SPHIGTDSAGVRSS
Trigger: GGAGGATCTGACTCCAGCAGAGTCTGTGCCAATGTGGGGTGAGCAGGGCCCCTGCCATGGAGCAGCAGGAATTTGAGGGATGGAGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR TCA 90 bp TCCCAGACGTTCCCTGCAGGCTGTTTATGCAGCGCCCATCCGAGATaGACCCACAGGACACTCAGGATCCCAGACTGCAGGAGTCGTCTG +
Preference number: 1 (lower is better)
Translates to: SQTFPAGCLCSAHPR*THRTLRIPDCRSRL
Trigger: CAGACGACTCCTGCAGTCTGGGATCCTGAGTGTCCTGTGGGTTCATCTCGGATGGGCGCTGCATAAACAGCCTGCAGGGAACGTCTGGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR GCA 90 bp GCTGTACTGAGAGTTTTTATGAGGACAAGGGGCCAGTCCTGTGCCTaGCTGATGTGGAGTCCTAGGCGGGCTTGGGCCGCAGGTTACCTG +
Preference number: 1 (lower is better)
Translates to: AVLRVFMRTRGQSCA*LMWSPRRAWAAGYL
Trigger: CAGGTAACCTGCGGCCCAAGCCCGCCTAGGACTCCACATCAGGCAGGCACAGGACTGGCCCCTTGTCCTCATAAAAACTCTCAGTACAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR TCA 90 bp CACAGACTCTGCTGGAGTCAGATCCTCCAAAGCCACAAGCTTCCTTaGGGCCACGGGGCCGCCTCATTCTTGTTCTGCCCCTTCCTCACA +
Preference number: 1 (lower is better)
Translates to: HRLCWSQILQSHKLP*GHGAASFLFCPFLT
Trigger: TGTGAGGAAGGGGCAGAACAAGAATGAGGCGGCCCCGTGGCCTCAAGGAAGCTTGTGGCTTTGGAGGATCTGACTCCAGCAGAGTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 90 bp CGGAGGCTCACAAAGGCAGTGCCAACAGGCGCTCATTCTCAGCAATaGGTGAAAGTAAGAGGAACCTGCCCTCCCTCCTCTCCACACCTC +
Preference number: 1 (lower is better)
Translates to: RRLTKAVPTGAHSQQ*VKVRGTCPPSSPHL
Trigger: GAGGTGTGGAGAGGAGGGAGGGCAGGTTCCTCTTACTTTCACCCATTGCTGAGAATGAGCGCCTGTTGGCACTGCCTTTGTGAGCCTCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 90 bp AAGTCACAGAACTGCGAACTGAGATGGACTCTCAGAAGCAAGAGGTaGCAAGCATGGCGGAGAGGAAGCGAGGGTCCTCCTGGCTGGTTA +
Preference number: 1 (lower is better)
Translates to: KSQNCELRWTLRSKR*QAWRRGSEGPPGWL
Trigger: TAACCAGCCAGGAGGACCCTCGCTTCCTCTCCGCCATGCTTGCCACCTCTTGCTTCTGAGAGTCCATCTCAGTTCGCAGTTCTGTGACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR TCA 90 bp GAGTCCTCCTTGGCAGCCCAGTCTTTATCCTCACTCACGTGGAAATaGGATTCGACCTCTCCTAATCACCTGGTGCCCGAGGAGCAGGTA +
Preference number: 1 (lower is better)
Translates to: ESSLAAQSLSSLTWK*DSTSPNHLVPEEQV
Trigger: TACCTGCTCCTCGGGCACCAGGTGATTAGGAGAGGTCGAATCTCATTTCCACGTGAGTGAGGATAAAGACTGGGCTGCCAAGGAGGACTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR GCA 90 bp GCTGGGGCAATCATCAGACAGTCACATGGAGTCACAGAACCATCTTaGAACAGCATCCCAAGACCTGGCCATTGGGCAGGATGTGGGACT +
Preference number: 1 (lower is better)
Translates to: AGAIIRQSHGVTEPS*NSIPRPGHWAGCGT
Trigger: AGTCCCACATCCTGCCCAATGGCCAGGTCTTGGGATGCTGTTGCAAGATGGTTCTGTGACTCCATGTGACTGTCTGATGATTGCCCCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 90 bp AACTGCGAACTGAGATGGACTCTCAGAAGCAAGAGGTGGCAAGCATaGCGGAGAGGAAGCGAGGGTCCTCCTGGCTGGTTAGATCTTACA +
Preference number: 1 (lower is better)
Translates to: NCELRWTLRSKRWQA*RRGSEGPPGWLDLT
Trigger: TGTAAGATCTAACCAGCCAGGAGGACCCTCGCTTCCTCTCCGCCATGCTTGCCACCTCTTGCTTCTGAGAGTCCATCTCAGTTCGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR TCA 90 bp GTCGTCTGGGATCACAGGCGGGGCAGAGCAATTTGTCAATGTTTATaGGGAGTCCTCCTTGGCAGCCCAGTCTTTATCCTCACTCACGTG +
Preference number: 1 (lower is better)
Translates to: VVWDHRRGRAICQCL*GVLLGSPVFILTHV
Trigger: CACGTGAGTGAGGATAAAGACTGGGCTGCCAAGGAGGACTCCTCATAAACATTGACAAATTGCTCTGCCCCGCCTGTGATCCCAGACGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 90 bp AGCTTCCTTCATATCCTGCCACCCAAACCAGTGCCAAGGTCATCATaGGCTTGTGTGGCACAGTCAGATTTAGTGACCATCCCCACTCCC +
Preference number: 1 (lower is better)
Translates to: SFLHILPPKPVPRSS*ACVAQSDLVTIPTP
Trigger: GGGAGTGGGGATGGTCACTAAATCTGACTGTGCCACACAAGCCCATGATGACCTTGGCACTGGTTTGGGTGGCAGGATATGAAGGAAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR TCA 90 bp CCACACCTCCCCAGTATTTGTCCTCATGGAGTAAATATCCAACAGTaGTCCCAGGGCATGGGAGTGGGAGTTAAGGCAAATGCCAGACTG +
Preference number: 1 (lower is better)
Translates to: PHLPSICPHGVNIQQ*SQGMGVGVKANARL
Trigger: CAGTCTGGCATTTGCCTTAACTCCCACTCCCATGCCCTGGGATCACTGTTGGATATTTACTCCATGAGGACAAATACTGGGGAGGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 90 bp CAGGCGGGGCAGAGCAATTTGTCAATGTTTATGAGGAGTCCTCCTTaGCAGCCCAGTCTTTATCCTCACTCACGTGGAAATGAGATTCGA +
Preference number: 1 (lower is better)
Translates to: QAGQSNLSMFMRSPP*QPSLYPHSRGNEIR
Trigger: TCGAATCTCATTTCCACGTGAGTGAGGATAAAGACTGGGCTGCCAAGGAGGACTCCTCATAAACATTGACAAATTGCTCTGCCCCGCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 90 bp TCATTCTTGTTCTGCCCCTTCCTCACACTGAAAGACTGCATAGCCTaGGGTGCAATGCCCAGGTGTGAAATTGATGCTCGGGAAAACAAA +
Preference number: 1 (lower is better)
Translates to: SFLFCPFLTLKDCIA*GAMPRCEIDARENK
Trigger: TTTGTTTTCCCGAGCATCAATTTCACACCTGGGCATTGCACCCCAGGCTATGCAGTCTTTCAGTGTGAGGAAGGGGCAGAACAAGAATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR GCA 90 bp GCACAGGGAATGAGAACTTCTGGAAGTGGGCCTGGACATCTGAATTaGACAGGCTTCCCAGATAGGTACGAAGGAACAAGAAACAAAACA +
Preference number: 1 (lower is better)
Translates to: AQGMRTSGSGPGHLN*TGFPDRYEGTRNKT
Trigger: TGTTTTGTTTCTTGTTCCTTCGTACCTATCTGGGAAGCCTGTGCAATTCAGATGTCCAGGCCCACTTCCAGAAGTTCTCATTCCCTGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377837.5
3UTR CCA 90 bp TGTAAGTACGAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTaGGGCAGATCCGGAGTCAGCTCTGGGCGGAGATGGATTTACCCT +
Preference number: 1 (lower is better)
Translates to: CKYEENGRHLSCYCH*GRSGVSSGRRWIYP
Trigger: AGGGTAAATCCATCTCCGCCCAGAGCTGACTCCGGATCTGCCCCAGTGACAATAACAAGATAAATGCCTTCCATTCTCTTCGTACTTACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377836.8
ENST00000377837.5
3UTR CCA 90 bp GATGTGATATCTTTGTTAGAGCAGATTAACTTGCTCTCAGGTGTATaGTCTGCGGCCATTGACTCAAGCACAGGGAATGAGAACTTCTGG +
Preference number: 1 (lower is better)
Translates to: DVISLLEQINLLSGV*SAAIDSSTGNENFW
Trigger: CCAGAAGTTCTCATTCCCTGTGCTTGAGTCAATGGCCGCAGACCATACACCTGAGAGCAAGTTAATCTGCTCTAACAAAGATATCACATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377837.5
3UTR-3UTR GCA 90 bp GAGGCGAGGGCGGCGAGGGCACCGGAGCGGATGCGGGCTCTGGGGCAGACGCGGAGGCGCGGGGTAGGGTaGCGGGTGCGGGGTGCAGAG +
Preference number: 2 (lower is better)
Translates to: EARAARAPERMRALGQTRRRGVG*RVRGAE
Trigger: CTCTGCACCCCGCACCCGGCACCCTACCCCGCGCCT...CCGCGTCTGCCCCAGAGCCCGCATCCGCTCCGGTGCCCTCGCCGCCCTCGCCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000489730.1
3UTR-3UTR CCA 90 bp GGGAGGCGAGGGCGGCGAGGGCACCGGAGCGGATGCGGGCTCTGGGGCAGACGCAGCGGATGCGGGCTCTaGGGCAGACGCGGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: GRRGRRGHRSGCGLWGRRSGCGL*GRRGRW
Trigger: CCAGCGCCCGCGTCTGCCCCAGAGCCCGCATCCGCT...GCGTCTGCCCCAGAGCCCGCATCCGCTCCGGTGCCCTCGCCGCCCTCGCCTCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487437.5
ENST00000489730.1
3UTR-3UTR CCA 90 bp AGGGTCTGTGGATCGGCCGAGGGGCTACCACGGCCGCCAGAGGCCAGGGCCGCAGGGCAGACGGGCCACTaGAATCCCCAGCGCGCCCGC +
Preference number: 2 (lower is better)
Translates to: RVCGSAEGLPRPPEARAAGQTGH*NPQRAR
Trigger: GCGGGCGCGCTGGGGATTCCAGTGGCCCGTCTGCCC...TGCGGCCCTGGCCTCTGGCGGCCGTGGTAGCCCCTCGGCCGATCCACAGACCCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000487437.5
ENST00000489730.1
3UTR-3UTR CCA 90 bp GTCTGGTGCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCAGCGGATGCGGGCTCTaGGGCAGACGCGGGCGCTGG +
Preference number: 2 (lower is better)
Translates to: VWCQCWGGCVGCPRSCGVSGCGL*GRRGRW
Trigger: CCAGCGCCCGCGTCTGCCCCAGAGCCCGCATCCGCT...GACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGCACCAGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487437.5
3UTR-3UTR CCA 90 bp AGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCGGGCAGACGGGCCACTaGAATCCCCAGCGCGCCCGC +
Preference number: 2 (lower is better)
Translates to: SPSPRAFSLPRQSQTAGFGQTGH*NPQRAR
Trigger: GCGGGCGCGCTGGGGATTCCAGTGGCCCGTCTGCCC...GAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000487437.5
3UTR-3UTR CCA 90 bp CTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGATCGGCCGAGAGCCGGCTTCCGGCCTaGGTGTGGGTACTGGGCTGG +
Preference number: 2 (lower is better)
Translates to: LSSAPRSQAVGRVCGSAESRLPA*VWVLGW
Trigger: CCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCT...CTCGGCCGATCCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR-3UTR TCA 90 bp CTGGTGCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCACAGCCAAGTTGGGGGTaGAGCAGGGACGCTCCTTTT +
Preference number: 2 (lower is better)
Translates to: LVPVLGWVCRLPTQLRGPQPSWG*SRDAPF
Trigger: AAAAGGAGCGTCCCTGCTTCACCCCCAACTTGGCTG...TGGACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGCACCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR-3UTR CCA 90 bp AGCCGAGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGCTTCCGGCCTGGGTGTaGGTACTGGGCTGGCCCCTA +
Preference number: 2 (lower is better)
Translates to: SRAPAPGLSVCHASHKQPLPAWV*VLGWPL
Trigger: TAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAG...CGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCTCGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR-3UTR CCA 90 bp GCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCAGTTCCACTTTGCCCAGGTCCTaGCTCTGGCTCTGGTCTGGT +
Preference number: 2 (lower is better)
Translates to: ASAGVGVSAAHAAAGSSSTLPRS*LWLWSG
Trigger: ACCAGACCAGAGCCAGAGCCAGGACCTGGGCAAAGT...GGAACTGGACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR-3UTR CCA 90 bp GCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCAGTTCCGTGTGGGTACTGGGCTaGCCCCTAATGATGGGAACA +
Preference number: 2 (lower is better)
Translates to: ASAGVGVSAAHAAAGSSSVWVLG*PLMMGT
Trigger: TGTTCCCATCATTAGGGGCCAGCCCAGTACCCACAC...GGAACTGGACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR-3UTR CCA 90 bp CCACGCAGCTGCGGGGTCCAGTTCCAGAACTATCTCCACCAGCTGGGATGGGGGAGTCGGCAGGGTCTGTaGATCGGCCGAGGGGCTACC +
Preference number: 2 (lower is better)
Translates to: PRSCGVQFQNYLHQLGWGSRQGL*IGRGAT
Trigger: GGTAGCCCCTCGGCCGATCCACAGACCCTGCCGACT...CCCCCATCCCAGCTGGTGGAGATAGTTCTGGAACTGGACCCCGCAGCTGCGTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000487437.5
3UTR-3UTR GCA 90 bp CCACGCAGCTGCGGGGTCCAGTTCCAGAACTATCTCCACCAGCTGGGATGGGGGCTGGCTCTGGTCTGGTaGCAGTGCTGGGGTGGGTGT +
Preference number: 2 (lower is better)
Translates to: PRSCGVQFQNYLHQLGWGLALVW*QCWGGC
Trigger: ACACCCACCCCAGCACTGGCACCAGACCAGAGCCAG...CCCCCATCCCAGCTGGTGGAGATAGTTCTGGAACTGGACCCCGCAGCTGCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR CAA 90 bp ACTAGTCCACTATATTCAGTGAGCACCCACTGTGCACCCTGTGCCTaGGGGACGTGGAGGCACGCTCAGCCCCAGCCTCGCCCTCCGGGA +
Preference number: 2 (lower is better)
Translates to: TSPLYSVSTHCAPCA*GTWRHAQPQPRPPG
Trigger: TCCCGGAGGGCGAGGCTGGGGCTGAGCGTGCCTCCACGTCCCCAAGGCACAGGGTGCACAGTGGGTGCTCACTGAATATAGTGGACTAGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR GCA 90 bp CTGCTGCCCTGTAGAGCCCTGGAAGTGACCAGAGCCCTTAGGCTACTGCTGCTGCTGGCTCTGGTCTGGTaGCAGTGCTGGGGTGGGTGT +
Preference number: 2 (lower is better)
Translates to: LLPCRALEVTRALRLLLLLALVW*QCWGGC
Trigger: ACACCCACCCCAGCACTGGCACCAGACCAGAGCCAG...CAGCAGCAGTAGCCTAAGGGCTCTGGTCACTTCCAGGGCTCTACAGGGCAGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR CCA 90 bp GTGACCATCCCCACTCCCACATTGGTTCTGTCTTCTTGCCCCCGGTGCTCTGGTCTTCCGGCCTGGGTGTaGGTACTGGGCTGGCCCCTA +
Preference number: 2 (lower is better)
Translates to: VTIPTPTLVLSSCPRCSGLPAWV*VLGWPL
Trigger: TAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAG...ACCAGAGCACCGGGGGCAAGAAGACAGAACCAATGTGGGAGTGGGGATGGTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR GCA 90 bp GGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTGCACACACCCCTGCGGACTTCAACCTGTCCAGTaGCCCAAGGTCCCAAGCAGT +
Preference number: 2 (lower is better)
Translates to: GEPAETFCAASSCTHPCGLQPVQ*PKVPSS
Trigger: ACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAG...TCCGCAGGGGTGTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR GCA 90 bp CCACGCAGCTGCGGGGTCCAGTTCCAGAACTATCTCCACCAGCTGGGATGGGGGCTTCAACCTGTCCAGTaGCCCAAGGTCCCAAGCAGT +
Preference number: 2 (lower is better)
Translates to: PRSCGVQFQNYLHQLGWGLQPVQ*PKVPSS
Trigger: ACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAG...CCCCCATCCCAGCTGGTGGAGATAGTTCTGGAACTGGACCCCGCAGCTGCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR-3UTR GCA 90 bp AAACAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGCCCCTAATGATGGGCCAGGGCTTTCAGTCTaGCACGCCAGTCACAAACAG +
Preference number: 2 (lower is better)
Translates to: KQPASGLGVGTGLAPNDGPGLSV*HASHKQ
Trigger: CTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGG...CCCATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR-3UTR GCA 90 bp GGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTGCACACACCCCTGCGGAAAAGTAAGAGGAACCTaGCCTCCCTCCTCTCCACAC +
Preference number: 2 (lower is better)
Translates to: GEPAETFCAASSCTHPCGKVRGT*PPSSPH
Trigger: GTGTGGAGAGGAGGGAGGGCAGGTTCCTCTTACTTT...TCCGCAGGGGTGTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CAA 90 bp GCACAGACTCTGCTGGAGTCAGATCCTCCAAAGCCACAAGCTTCCTaGAGGCCACGGGGCCGCCTCATTCTTGTTCTGCCCCTTCCTCAC +
Preference number: 2 (lower is better)
Translates to: AQTLLESDPPKPQAS*RPRGRLILVLPLPH
Trigger: GTGAGGAAGGGGCAGAACAAGAATGAGGCGGCCCCGTGGCCTCAAGGAAGCTTGTGGCTTTGGAGGATCTGACTCCAGCAGAGTCTGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CAA 90 bp TGCCTGTGGAGGAGGATGTTGGCGTTCCTATTTCACAAGCCCGGCTaGGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTGCACAC +
Preference number: 2 (lower is better)
Translates to: CLWRRMLAFLFHKPG*ESQRRPSAQLALAH
Trigger: GTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCCAAGCCGGGCTTGTGAAATAGGAACGCCAACATCCTCCTCCACAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR CCA 90 bp GGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTGCACACACCCCTGCGGAAAGCGAGGGTCCTCCTaGCTGGTTAGATCTTACAGA +
Preference number: 2 (lower is better)
Translates to: GEPAETFCAASSCTHPCGKRGSS*LVRSYR
Trigger: TCTGTAAGATCTAACCAGCCAGGAGGACCCTCGCTT...TCCGCAGGGGTGTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR TCA 90 bp TGCCTGATGTGGAGTCCTAGGCGGGCTTGGGCCGCAGGTTACCTGCTCCCGGAGTTCATGAATCCCCCATaGAATGATGGGTGTTTGCCT +
Preference number: 2 (lower is better)
Translates to: CLMWSPRRAWAAGYLLPEFMNPP*NDGCLP
Trigger: AGGCAAACACCCATCATTTCATGGGGGATTCATGAA...CTCCGGGAGCAGGTAACCTGCGGCCCAAGCCCGCCTAGGACTCCACATCAGGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR TCA 90 bp TTGGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTGCACACACCCCTGCGCACAGAACTGCGAACTaGGATGGACTCTCAGAAGCA +
Preference number: 2 (lower is better)
Translates to: LESQRRPSAQLALAHTPAHRTAN*DGLSEA
Trigger: TGCTTCTGAGAGTCCATCTCAGTTCGCAGTTCTGTG...CGCAGGGGTGTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR GCA 90 bp TTGGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTGCACACACCCCTGCGCTCACACTGAAAGACTaGATAGCCTGGGGTGCAATG +
Preference number: 2 (lower is better)
Translates to: LESQRRPSAQLALAHTPALTLKD*IAWGAM
Trigger: CATTGCACCCCAGGCTATGCAGTCTTTCAGTGTGAG...CGCAGGGGTGTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CAA 90 bp GTCAGATTTAGTGACCATCCCCACTCCCACATTGGTTCTGTCTTCTaGCCCCCGGTGCTCTGGTCCCTAGCACAGGCTGCTGATTTGGGG +
Preference number: 2 (lower is better)
Translates to: VRFSDHPHSHIGSVF*PPVLWSLAQAADLG
Trigger: CCCCAAATCAGCAGCCTGTGCTAGGGACCAGAGCACCGGGGGCAAGAAGACAGAACCAATGTGGGAGTGGGGATGGTCACTAAATCTGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR GCA 90 bp TTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCTGGGTGTGGGTACGCTTCTTCTTCACCCTaGTGCCTCTTGTCCTTTCTT +
Preference number: 2 (lower is better)
Translates to: FSLPRQSQTAGFRPGCGYASSSP*CLLSFL
Trigger: AAGAAAGGACAAGAGGCAGCAGGGTGAAGAAGAAGC...GTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR-3UTR GCA 90 bp TTGGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTGCACACACCCCTGCGTTGGAGCCAGGTCAATaGAAGTCACAGAACTGCGAA +
Preference number: 2 (lower is better)
Translates to: LESQRRPSAQLALAHTPALEPGQ*KSQNCE
Trigger: TTCGCAGTTCTGTGACTTGCATTGACCTGGCTCCAA...CGCAGGGGTGTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR CCA 90 bp CTTCCTTCATATCCTGCCACCCAAACCAGTGCCAAGGTCATCATGGGCTTGTGTCCCAGGTCCTGGCTCTaGCTCTGGTCTGGTGCCAGT +
Preference number: 2 (lower is better)
Translates to: LPSYPATQTSAKVIMGLCPRSWL*LWSGAS
Trigger: ACTGGCACCAGACCAGAGCCAGAGCCAGGACCTGGG...ACACAAGCCCATGATGACCTTGGCACTGGTTTGGGTGGCAGGATATGAAGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR GCA 90 bp TTGGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTGCACACACCCCTGCGGAAATGATGGGTGTTTaGCTGATTATGGGCCAACAG +
Preference number: 2 (lower is better)
Translates to: LESQRRPSAQLALAHTPAEMMGV*LIMGQQ
Trigger: CTGTTGGCCCATAATCAGGCAAACACCCATCATTTC...CGCAGGGGTGTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CAA 90 bp AGCTGGGGCAATCATCAGACAGTCACATGGAGTCACAGAACCATCTaGCAACAGCATCCCAAGACCTGGCCATTGGGCAGGATGTGGGAC +
Preference number: 2 (lower is better)
Translates to: SWGNHQTVTWSHRTI*QQHPKTWPLGRMWD
Trigger: GTCCCACATCCTGCCCAATGGCCAGGTCTTGGGATGCTGTTGCAAGATGGTTCTGTGACTCCATGTGACTGTCTGATGATTGCCCCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CAA 90 bp CCAGACTGCAGGAGTCGTCTGGGATCACAGGCGGGGCAGAGCAATTaGTCAATGTTTATGAGGAGTCCTCCTTGGCAGCCCAGTCTTTAT +
Preference number: 2 (lower is better)
Translates to: PDCRSRLGSQAGQSN*SMFMRSPPWQPSLY
Trigger: ATAAAGACTGGGCTGCCAAGGAGGACTCCTCATAAACATTGACAAATTGCTCTGCCCCGCCTGTGATCCCAGACGACTCCTGCAGTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR TCA 90 bp CACCCCTGCGGAGAAACTCTGCCTTCTTGCCTGGGGCCCAGAACCTTACCCACCCTGACTATGATTTCATaGATCCCCCATGAAATGATG +
Preference number: 2 (lower is better)
Translates to: HPCGETLPSCLGPRTLPTLTMIS*IPHEMM
Trigger: CATCATTTCATGGGGGATTCATGAAATCATAGTCAG...GGTGGGTAAGGTTCTGGGCCCCAGGCAAGAAGGCAGAGTTTCTCCGCAGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CAA 90 bp CCTTCATATCCTGCCACCCAAACCAGTGCCAAGGTCATCATGGGCTaGTGTGGCACAGTCAGATTTAGTGACCATCCCCACTCCCACATT +
Preference number: 2 (lower is better)
Translates to: PSYPATQTSAKVIMG*CGTVRFSDHPHSHI
Trigger: AATGTGGGAGTGGGGATGGTCACTAAATCTGACTGTGCCACACAAGCCCATGATGACCTTGGCACTGGTTTGGGTGGCAGGATATGAAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR GCA 90 bp AGCAAGTCTATTGGCAACATTTTCCCACGAGCATGTGCCCACTTTGTATCTGTGGAGCCCTTAGGCTACTaGTGCTGCATGCCCAGAGGG +
Preference number: 2 (lower is better)
Translates to: SKSIGNIFPRACAHFVSVEPLGY*CCMPRG
Trigger: CCCTCTGGGCATGCAGCAGCAGTAGCCTAAGGGCTC...CACAGATACAAAGTGGGCACATGCTCGTGGGAAAATGTTGCCAATAGACTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR GCA 90 bp AGCAAGTCTATTGGCAACATTTTCCCACGAGCATGTGCCCACTTTGTATCTGTGGGCCAGTCCTGTGCCTaGCTGATGTGGAGTCCTAGG +
Preference number: 2 (lower is better)
Translates to: SKSIGNIFPRACAHFVSVGQSCA*LMWSPR
Trigger: CCTAGGACTCCACATCAGGCAGGCACAGGACTGGCC...CACAGATACAAAGTGGGCACATGCTCGTGGGAAAATGTTGCCAATAGACTTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CAA 90 bp TGGCCCATCTACAATCCTTCTCCCCGTGACTGCTTGAGTTGTAGCTaGATTGGAGCCAGGTCAATGCAAGTCACAGAACTGCGAACTGAG +
Preference number: 2 (lower is better)
Translates to: WPIYNPSPRDCLSCS*IGARSMQVTELRTE
Trigger: CTCAGTTCGCAGTTCTGTGACTTGCATTGACCTGGCTCCAATCAAGCTACAACTCAAGCAGTCACGGGGAGAAGGATTGTAGATGGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR TCA 90 bp CAACATTTTCCCACGAGCATGTGCCCACTTTGTATCTGTGTGTCACACTTTCGCCCTCCGAGGTTCAAGTaGTTCTCTTGCCTCAGCCTC +
Preference number: 2 (lower is better)
Translates to: QHFPTSMCPLCICVSHFRPPRFK*FSCLSL
Trigger: GAGGCTGAGGCAAGAGAATCACTTGAACCTCGGAGG...GCGAAAGTGTGACACACAGATACAAAGTGGGCACATGCTCGTGGGAAAATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR GCA 90 bp CCACTTTGTATCTGTGTGTCACACTTTCGCAATTCTTGCAATATTTCAAACTTCGGTGGGTGTGTCGGCTaGCCACGCAGCTGCGGGGTC +
Preference number: 2 (lower is better)
Translates to: PLCICVSHFRNSCNISNFGGCVG*PRSCGV
Trigger: GACCCCGCAGCTGCGTGGGCAGCCGACACACCCACC...GAAGTTTGAAATATTGCAAGAATTGCGAAAGTGTGACACACAGATACAAAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR CCA 90 bp AGCAAGTCTATTGGCAACATTTTCCCACGAGCATGTGCCCACTTTGTATCTGTGGTGTGGGTACTGGGCTaGCCCCTAATGATGGGAACA +
Preference number: 2 (lower is better)
Translates to: SKSIGNIFPRACAHFVSVVWVLG*PLMMGT
Trigger: TGTTCCCATCATTAGGGGCCAGCCCAGTACCCACAC...CACAGATACAAAGTGGGCACATGCTCGTGGGAAAATGTTGCCAATAGACTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR CCA 90 bp TTCAAACTTCTTCCTTATTATATCTGTTGTGAAGCTGGTTCTCCCAGACGTTCCTTGCCCCCGGTGCTCTaGTCCCTAGCACAGGCTGCT +
Preference number: 2 (lower is better)
Translates to: FKLLPYYICCEAGSPRRSLPPVL*SLAQAA
Trigger: AGCAGCCTGTGCTAGGGACCAGAGCACCGGGGGCAA...GGAACGTCTGGGAGAACCAGCTTCACAACAGATATAATAAGGAAGAAGTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR CCA 90 bp CAACATTTTCCCACGAGCATGTGCCCACTTTGTATCTGTGTGTCACACTTTCGCGTGCCAAGGTCATCATaGGCTTGTGTGGCACAGTCA +
Preference number: 2 (lower is better)
Translates to: QHFPTSMCPLCICVSHFRVPRSS*ACVAQS
Trigger: TGACTGTGCCACACAAGCCCATGATGACCTTGGCAC...GCGAAAGTGTGACACACAGATACAAAGTGGGCACATGCTCGTGGGAAAATGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR GCA 90 bp AGCAAGTCTATTGGCAACATTTTCCCACGAGCATGTGCCCACTTTGTATCTGTGACAGCTCCCAGCATATaGACCCTTTTGCTCTGCTCT +
Preference number: 2 (lower is better)
Translates to: SKSIGNIFPRACAHFVSVTAPSI*TLLLCS
Trigger: AGAGCAGAGCAAAAGGGTGCATATGCTGGGAGCTGT...CACAGATACAAAGTGGGCACATGCTCGTGGGAAAATGTTGCCAATAGACTTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR CCA 90 bp CCACTTTGTATCTGTGTGTCACACTTTCGCAATTCTTGCAATATTTCAAACTTCCCTCGTGGGCACTCCTaGGATCAGCAGCCCCTTCCT +
Preference number: 2 (lower is better)
Translates to: PLCICVSHFRNSCNISNFPRGHS*DQQPLP
Trigger: AGGAAGGGGCTGCTGATCCCAGGAGTGCCCACGAGG...GAAGTTTGAAATATTGCAAGAATTGCGAAAGTGTGACACACAGATACAAAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR CCA 90 bp AGCAAGTCTATTGGCAACATTTTCCCACGAGCATGTGCCCACTTTGTATCTGTGGAGGGTCCTCCTGGCTaGTTAGATCTTACAGAGTTT +
Preference number: 2 (lower is better)
Translates to: SKSIGNIFPRACAHFVSVEGPPG*LDLTEF
Trigger: AAACTCTGTAAGATCTAACCAGCCAGGAGGACCCTC...CACAGATACAAAGTGGGCACATGCTCGTGGGAAAATGTTGCCAATAGACTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR CCA 90 bp AGCAAGTCTATTGGCAACATTTTCCCACGAGCATGTGCCCACTTTGTATCTGTGTGTGGAGGAGGATGTTaGCGTTCCTATTTCACAAGC +
Preference number: 2 (lower is better)
Translates to: SKSIGNIFPRACAHFVSVCGGGC*RSYFTS
Trigger: GCTTGTGAAATAGGAACGCCAACATCCTCCTCCACA...CACAGATACAAAGTGGGCACATGCTCGTGGGAAAATGTTGCCAATAGACTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CAA 90 bp CAACCACCATTCTTAGATGTGATATCTTTGTTAGAGCAGATTAACTaGCTCTCAGGTGTATGGTCTGCGGCCATTGACTCAAGCACAGGG +
Preference number: 2 (lower is better)
Translates to: QPPFLDVISLLEQIN*LSGVWSAAIDSSTG
Trigger: CCCTGTGCTTGAGTCAATGGCCGCAGACCATACACCTGAGAGCAAGTTAATCTGCTCTAACAAAGATATCACATCTAAGAATGGTGGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377837.5
3UTR-3UTR GCA 90 bp CCACTTTGTATCTGTGTGTCACACTTTCGCAATTCTTGCAATATTTCAAACTTCCCAGGGCTTTCAGTCTaGCACGCCAGTCACAAACAG +
Preference number: 2 (lower is better)
Translates to: PLCICVSHFRNSCNISNFPGLSV*HASHKQ
Trigger: CTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGG...GAAGTTTGAAATATTGCAAGAATTGCGAAAGTGTGACACACAGATACAAAGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CAA 90 bp CAAGCAAGTCTATTGGCAACATTTTCCCACGAGCATGTGCCCACTTaGTATCTGTGTGTCACACTTTCGCAATTCTTGCAATATTTCAAA +
Preference number: 2 (lower is better)
Translates to: QASLLATFSHEHVPT*YLCVTLSQFLQYFK
Trigger: TTTGAAATATTGCAAGAATTGCGAAAGTGTGACACACAGATACAAAGTGGGCACATGCTCGTGGGAAAATGTTGCCAATAGACTTGCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR TCA 90 bp CCACTTTGTATCTGTGTGTCACACTTTCGCAATTCTTGCAATATTTCAAACTTCAGTAACCAGTCTCAATaGGTAGCAGGGAGTAGTTTG +
Preference number: 2 (lower is better)
Translates to: PLCICVSHFRNSCNISNFSNQSQ*VAGSSL
Trigger: CAAACTACTCCCTGCTACTCATTGAGACTGGTTACT...GAAGTTTGAAATATTGCAAGAATTGCGAAAGTGTGACACACAGATACAAAGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR CCA 90 bp CCACTTTGTATCTGTGTGTCACACTTTCGCAATTCTTGCAATATTTCAAACTTCGCTCATTCTCAGCAATaGGTGAAAGTAAGAGGAACC +
Preference number: 2 (lower is better)
Translates to: PLCICVSHFRNSCNISNFAHSQQ*VKVRGT
Trigger: GGTTCCTCTTACTTTCACCCATTGCTGAGAATGAGC...GAAGTTTGAAATATTGCAAGAATTGCGAAAGTGTGACACACAGATACAAAGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR CCA 90 bp CCACTTTGTATCTGTGTGTCACACTTTCGCAATTCTTGCAATATTTCAAACTTCCATCAGACAGTCACATaGAGTCACAGAACCATCTTG +
Preference number: 2 (lower is better)
Translates to: PLCICVSHFRNSCNISNFHQTVT*SHRTIL
Trigger: CAAGATGGTTCTGTGACTCCATGTGACTGTCTGATG...GAAGTTTGAAATATTGCAAGAATTGCGAAAGTGTGACACACAGATACAAAGTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CAA 90 bp GAGCATGTGCCCACTTTGTATCTGTGTGTCACACTTTCGCAATTCTaGCAATATTTCAAACTTCTTCCTTATTATATCTGTTGTGAAGCT +
Preference number: 2 (lower is better)
Translates to: EHVPTLYLCVTLSQF*QYFKLLPYYICCEA
Trigger: AGCTTCACAACAGATATAATAAGGAAGAAGTTTGAAATATTGCAAGAATTGCGAAAGTGTGACACACAGATACAAAGTGGGCACATGCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR CAA 90 bp GGGAGGCGAGGGCGGCGAGGGCACCGGAGCGGATGCGGGCTCTGGGGCAGACGCTCTTCTCCAGCCAAGTaGGGGGTGAAGCAGGGACGC +
Preference number: 3 (lower is better)
Translates to: GRRGRRGHRSGCGLWGRRSSPAK*GVKQGR
Trigger: GCGTCCCTGCTTCACCCCCAACTTGGCTGGAGAAGA...GCGTCTGCCCCAGAGCCCGCATCCGCTCCGGTGCCCTCGCCGCCCTCGCCTCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487437.5
3UTR CCA 72 bp CAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTaGATCGGCCGAGGGGCTACCACGGCCGCCAGAGGC +
Preference number: 3 (lower is better)
Translates to: QCPKVPSSRQGL*IGRGATTAARG
Trigger: GCCTCTGGCGGCCGTGGTAGCCCCTCGGCCGATCCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487437.5
3UTR-3UTR CAA 90 bp GGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTGCACACACCCCTGCGGATGTGCACCCTGTGCCTaGGGGACGTGGAGGCACGCT +
Preference number: 3 (lower is better)
Translates to: GEPAETFCAASSCTHPCGCAPCA*GTWRHA
Trigger: AGCGTGCCTCCACGTCCCCAAGGCACAGGGTGCACA...TCCGCAGGGGTGTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR GCA 72 bp CAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTaGGGGGTCCAGTTCCAGAACTATCTCCACCAGCTG +
Preference number: 3 (lower is better)
Translates to: QCWGGCVGCPRS*GVQFQNYLHQL
Trigger: CAGCTGGTGGAGATAGTTCTGGAACTGGACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR GCA 72 bp GAGAGCAGTGACCAGGCAGGGTGCACGGCTGCACTTTaGCCAGGTCCTGGCTCTGGCTCTGGTCTGGTGCCA +
Preference number: 3 (lower is better)
Translates to: ESSDQAGCTAAL*PGPGSGSGLVP
Trigger: TGGCACCAGACCAGAGCCAGAGCCAGGACCTGGGCAAAGTGCAGCCGTGCACCCTGCCTGGTCACTGCTCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR GCA 72 bp TGTGGAGTCCTAGGCGGGCTTGGGCCGCAGGTTACCTaGTCCCGGAGGCTCACAAAGGCAGTGCCAACAGGC +
Preference number: 3 (lower is better)
Translates to: CGVLGGLGPQVT*SRRLTKAVPTG
Trigger: GCCTGTTGGCACTGCCTTTGTGAGCCTCCGGGAGCAGGTAACCTGCGGCCCAAGCCCGCCTAGGACTCCACA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 72 bp GCACACACCCCTGCGGAGAAACTCTGCCTTCTTGCCTaGGGCCCAGAACCTTACCCACCCAGGCTTGCCCCC +
Preference number: 3 (lower is better)
Translates to: AHTPAEKLCLLA*GPEPYPPRLAP
Trigger: GGGGGCAAGCCTGGGTGGGTAAGGTTCTGGGCCCCAGGCAAGAAGGCAGAGTTTCTCCGCAGGGGTGTGTGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 72 bp TCTGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCTaGGTGTGGGTACTGGGCTGGCCCCTAATGATGGGA +
Preference number: 3 (lower is better)
Translates to: SATPVTNSRLPA*VWVLGWPLMMG
Trigger: TCCCATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR CCA 72 bp TCCTGTGCCTGCCTGATGTGGAGTCCTAGGCGGGCTTaGGCCGCAGGTTACCTGCTCCCGGAGGCTCACAAA +
Preference number: 3 (lower is better)
Translates to: SCACLMWSPRRA*AAGYLLPEAHK
Trigger: TTTGTGAGCCTCCGGGAGCAGGTAACCTGCGGCCCAAGCCCGCCTAGGACTCCACATCAGGCAGGCACAGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR CAA 90 bp AAACAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGCCCCTAATGATGGGTCTTCTCCAGCCAAGTaGGGGGTGAAGCAGGGACGC +
Preference number: 3 (lower is better)
Translates to: KQPASGLGVGTGLAPNDGSSPAK*GVKQGR
Trigger: GCGTCCCTGCTTCACCCCCAACTTGGCTGGAGAAGA...CCCATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR GCA 72 bp AACAGCAGCCGCCACCAAGAGCTTCAACCTGTCCAGTaGCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGG +
Preference number: 3 (lower is better)
Translates to: NSSRHQELQPVQ*PKVPSSRQGLW
Trigger: CCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGCGGCTGCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR CCA 72 bp ACGCCAGTCACAAACAGCCGGCTTCCGGCCTGGGTGTaGGTACTGGGCTGGCCCCTAATGATGGGAACAGCA +
Preference number: 3 (lower is better)
Translates to: TPVTNSRLPAWV*VLGWPLMMGTA
Trigger: TGCTGTTCCCATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTGACTGGCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
3UTR GCA 72 bp TCTTGCACACACCCCTGCGGAGAAACTCTGCCTTCTTaGCTGGGGCCCAGAACCTTACCCACCCAGGCTTGC +
Preference number: 3 (lower is better)
Translates to: SCTHPCGETLPS*LGPRTLPTQAC
Trigger: GCAAGCCTGGGTGGGTAAGGTTCTGGGCCCCAGGCAAGAAGGCAGAGTTTCTCCGCAGGGGTGTGTGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR GCA 72 bp CAGCTAGCTCTTGCACACACCCCTGCGGAGAAACTCTaGCTTCTTGCCTGGGGCCCAGAACCTTACCCACCC +
Preference number: 3 (lower is better)
Translates to: QLALAHTPAEKL*LLAWGPEPYPP
Trigger: GGGTGGGTAAGGTTCTGGGCCCCAGGCAAGAAGGCAGAGTTTCTCCGCAGGGGTGTGTGCAAGAGCTAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR GCA 72 bp GGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTaGACACACCCCTGCGGAGAAACTCTGCCTTCTTGC +
Preference number: 3 (lower is better)
Translates to: GEPAETFCAASS*THPCGETLPSC
Trigger: GCAAGAAGGCAGAGTTTCTCCGCAGGGGTGTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR TCA 72 bp TTTGCTCTGCTCTGCTGCCCTGTAGAGCCCTGGAAGTaGCCAGAGCCCTTAGGCTACTGCTGCTGCATGCCC +
Preference number: 3 (lower is better)
Translates to: FALLCCPVEPWK*PEPLGYCCCMP
Trigger: GGGCATGCAGCAGCAGTAGCCTAAGGGCTCTGGTCACTTCCAGGGCTCTACAGGGCAGCAGAGCAGAGCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR TCA 72 bp TGCTGGAGTCAGATCCTCCAAAGCCACAAGCTTCCTTaGGGCCACGGGGCCGCCTCATTCTTGTTCTGCCCC +
Preference number: 3 (lower is better)
Translates to: CWSQILQSHKLP*GHGAASFLFCP
Trigger: GGGGCAGAACAAGAATGAGGCGGCCCCGTGGCCTCAAGGAAGCTTGTGGCTTTGGAGGATCTGACTCCAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR GCA 72 bp GCAGGGGCCCTGCTCACCCCACATTGGCACAGACTCTaGTGGAGTCAGATCCTCCAAAGCCACAAGCTTCCT +
Preference number: 3 (lower is better)
Translates to: AGALLTPHWHRL*WSQILQSHKLP
Trigger: AGGAAGCTTGTGGCTTTGGAGGATCTGACTCCAGCAGAGTCTGTGCCAATGTGGGGTGAGCAGGGCCCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR GCA 72 bp AGAGTTTTTATGAGGACAAGGGGCCAGTCCTGTGCCTaGCTGATGTGGAGTCCTAGGCGGGCTTGGGCCGCA +
Preference number: 3 (lower is better)
Translates to: RVFMRTRGQSCA*LMWSPRRAWAA
Trigger: TGCGGCCCAAGCCCGCCTAGGACTCCACATCAGGCAGGCACAGGACTGGCCCCTTGTCCTCATAAAAACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 72 bp TCCCACATTGGTTCTGTCTTCTTGCCCCCGGTGCTCTaGTCCCTAGCACAGGCTGCTGATTTGGGGACTCGG +
Preference number: 3 (lower is better)
Translates to: SHIGSVFLPPVL*SLAQAADLGTR
Trigger: CCGAGTCCCCAAATCAGCAGCCTGTGCTAGGGACCAGAGCACCGGGGGCAAGAAGACAGAACCAATGTGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR TCA 72 bp TTCCCTGCAGGCTGTTTATGCAGCGCCCATCCGAGATaGACCCACAGGACACTCAGGATCCCAGACTGCAGG +
Preference number: 3 (lower is better)
Translates to: FPAGCLCSAHPR*THRTLRIPDCR
Trigger: CCTGCAGTCTGGGATCCTGAGTGTCCTGTGGGTTCATCTCGGATGGGCGCTGCATAAACAGCCTGCAGGGAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 72 bp AACTGCGAACTGAGATGGACTCTCAGAAGCAAGAGGTaGCAAGCATGGCGGAGAGGAAGCGAGGGTCCTCCT +
Preference number: 3 (lower is better)
Translates to: NCELRWTLRSKR*QAWRRGSEGPP
Trigger: AGGAGGACCCTCGCTTCCTCTCCGCCATGCTTGCCACCTCTTGCTTCTGAGAGTCCATCTCAGTTCGCAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 72 bp ACAGGACACTCAGGATCCCAGACTGCAGGAGTCGTCTaGGATCACAGGCGGGGCAGAGCAATTTGTCAATGT +
Preference number: 3 (lower is better)
Translates to: TGHSGSQTAGVV*DHRRGRAICQC
Trigger: ACATTGACAAATTGCTCTGCCCCGCCTGTGATCCCAGACGACTCCTGCAGTCTGGGATCCTGAGTGTCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR CAA 90 bp AAAGGCAGTGCCAACAGGCGCTCATTCTCAGCAATGGGTGAAAGTAAGAGGAACGCACAGGCTGCTGATTaGGGGACTCGGGGGAGAATC +
Preference number: 3 (lower is better)
Translates to: KGSANRRSFSAMGESKRNAQAAD*GTRGRI
Trigger: GATTCTCCCCCGAGTCCCCAAATCAGCAGCCTGTGC...GTTCCTCTTACTTTCACCCATTGCTGAGAATGAGCGCCTGTTGGCACTGCCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR GCA 72 bp CCTACAGCTTCCTTCATATCCTGCCACCCAAACCAGTaGCAAGGTCATCATGGGCTTGTGTGGCACAGTCAG +
Preference number: 3 (lower is better)
Translates to: PTASFISCHPNQ*QGHHGLVWHSQ
Trigger: CTGACTGTGCCACACAAGCCCATGATGACCTTGGCACTGGTTTGGGTGGCAGGATATGAAGGAAGCTGTAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR GCA 72 bp CTCCCAAGTAGCTGGGGTTACAGGCACCCGCCGTCATaGCCAGCTAATTTCCATATTTTTGTAGAGACGGGG +
Preference number: 3 (lower is better)
Translates to: LPSSWGYRHPPS*PANFHIFVETG
Trigger: CCCCGTCTCTACAAAAATATGGAAATTAGCTGGGCATGACGGCGGGTGCCTGTAACCCCAGCTACTTGGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 72 bp TTCTGCCCCTTCCTCACACTGAAAGACTGCATAGCCTaGGGTGCAATGCCCAGGTGTGAAATTGATGCTCGG +
Preference number: 3 (lower is better)
Translates to: FCPFLTLKDCIA*GAMPRCEIDAR
Trigger: CCGAGCATCAATTTCACACCTGGGCATTGCACCCCAGGCTATGCAGTCTTTCAGTGTGAGGAAGGGGCAGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 72 bp ACAAAGGCAGTGCCAACAGGCGCTCATTCTCAGCAATaGGTGAAAGTAAGAGGAACCTGCCCTCCCTCCTCT +
Preference number: 3 (lower is better)
Translates to: TKAVPTGAHSQQ*VKVRGTCPPSS
Trigger: AGAGGAGGGAGGGCAGGTTCCTCTTACTTTCACCCATTGCTGAGAATGAGCGCCTGTTGGCACTGCCTTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 72 bp TCCCTCCTCTCCACACCTCCCCAGTATTTGTCCTCATaGAGTAAATATCCAACAGTGATCCCAGGGCATGGG +
Preference number: 3 (lower is better)
Translates to: SLLSTPPQYLSS*SKYPTVIPGHG
Trigger: CCCATGCCCTGGGATCACTGTTGGATATTTACTCCATGAGGACAAATACTGGGGAGGTGTGGAGAGGAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR-3UTR CAA 90 bp AGCAAGTCTATTGGCAACATTTTCCCACGAGCATGTGCCCACTTTGTATCTGTGATTGGTTCTGTCTTCTaGCCCCCGGTGCTCTGGTCC +
Preference number: 3 (lower is better)
Translates to: SKSIGNIFPRACAHFVSVIGSVF*PPVLWS
Trigger: GGACCAGAGCACCGGGGGCAAGAAGACAGAACCAAT...CACAGATACAAAGTGGGCACATGCTCGTGGGAAAATGTTGCCAATAGACTTGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 72 bp GAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTaGGGCAGATCCGGAGTCAGCTCTGGGCGGAGATGG +
Preference number: 3 (lower is better)
Translates to: EENGRHLSCYCH*GRSGVSSGRRW
Trigger: CCATCTCCGCCCAGAGCTGACTCCGGATCTGCCCCAGTGACAATAACAAGATAAATGCCTTCCATTCTCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377836.8
ENST00000377837.5
3UTR-3UTR CAA 90 bp TGGCGGAGAGGAAGCGAGGGTCCTCCTGGCTGGTTAGATCTTACAGAGTTTAAGACACCTCCCCAGTATTaGTCCTCATGGAGTAAATAT +
Preference number: 3 (lower is better)
Translates to: WRRGSEGPPGWLDLTEFKTPPQY*SSWSKY
Trigger: ATATTTACTCCATGAGGACAAATACTGGGGAGGTGT...CTTAAACTCTGTAAGATCTAACCAGCCAGGAGGACCCTCGCTTCCTCTCCGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR GCA 72 bp ATGAGAACTTCTGGAAGTGGGCCTGGACATCTGAATTaGACAGGCTTCCCAGATAGGTACGAAGGAACAAGA +
Preference number: 3 (lower is better)
Translates to: MRTSGSGPGHLN*TGFPDRYEGTR
Trigger: TCTTGTTCCTTCGTACCTATCTGGGAAGCCTGTGCAATTCAGATGTCCAGGCCCACTTCCAGAAGTTCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377837.5
3UTR-3UTR CAA 90 bp AGCAAGTCTATTGGCAACATTTTCCCACGAGCATGTGCCCACTTTGTATCTGTGAAGGTCATCATGGGCTaGTGTGGCACAGTCAGATTT +
Preference number: 3 (lower is better)
Translates to: SKSIGNIFPRACAHFVSVKVIMG*CGTVRF
Trigger: AAATCTGACTGTGCCACACAAGCCCATGATGACCTT...CACAGATACAAAGTGGGCACATGCTCGTGGGAAAATGTTGCCAATAGACTTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR TCA 72 bp CCCAGTATTTGTCCTCATGGAGTAAATATCCAACAGTaGTCCCAGGGCATGGGAGTGGGAGTTAAGGCAAAT +
Preference number: 3 (lower is better)
Translates to: PSICPHGVNIQQ*SQGMGVGVKAN
Trigger: ATTTGCCTTAACTCCCACTCCCATGCCCTGGGATCACTGTTGGATATTTACTCCATGAGGACAAATACTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CCA 72 bp TCTTTGTTAGAGCAGATTAACTTGCTCTCAGGTGTATaGTCTGCGGCCATTGACTCAAGCACAGGGAATGAG +
Preference number: 3 (lower is better)
Translates to: SLLEQINLLSGV*SAAIDSSTGNE
Trigger: CTCATTCCCTGTGCTTGAGTCAATGGCCGCAGACCATACACCTGAGAGCAAGTTAATCTGCTCTAACAAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377837.5
3UTR GCA 72 bp AAGCAAGTCTATTGGCAACATTTTCCCACGAGCATGTaGCCACTTTGTATCTGTGTGTCACACTTTCGCAAT +
Preference number: 3 (lower is better)
Translates to: KQVYWQHFPTSM*PLCICVSHFRN
Trigger: ATTGCGAAAGTGTGACACACAGATACAAAGTGGGCACATGCTCGTGGGAAAATGTTGCCAATAGACTTGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp AGGCGAGGGCGGCGAGGGCACCGGAGCGGATGCGGGCTCTGGGGCAGACGCGGGGGCTCAGGCTCTGGTTaGTGCGCGCGCGCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: RRGRRGHRSGCGLWGRRGGSGSG*CARAGA
Trigger: AGCGCCGGCGCGCGCGCATCAACCAGAGCCTGAGCC...CCCGCGTCTGCCCCAGAGCCCGCATCCGCTCCGGTGCCCTCGCCGCCCTCGCCT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000487437.5
ENST00000489730.1
CDS-3UTR CCA 90 bp GAGGCGAGGGCGGCGAGGGCACCGGAGCGGATGCGGGCTCTGGGGCAGACGCGGTCCGCGGGGAAGCGGTaGCAGCTGCGAGCCCCACGC +
Preference number: 4 (lower is better)
Translates to: EARAARAPERMRALGQTRSAGKR*QLRAPR
Trigger: GCGTGGGGCTCGCAGCTGCCACCGCTTCCCCGCGGA...CCGCGTCTGCCCCAGAGCCCGCATCCGCTCCGGTGCCCTCGCCGCCCTCGCCTC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487437.5
ENST00000489730.1
CDS-3UTR TCA 90 bp AGGGAGGCGAGGGCGGCGAGGGCACCGGAGCGGATGCGGGCTCTGGGGCAGACGGGCTCAGGCTCTGGTTaGTGCGCGCGCGCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: REARAARAPERMRALGQTGSGSG*CARAGA
Trigger: AGCGCCGGCGCGCGCGCATCAACCAGAGCCTGAGCC...CGTCTGCCCCAGAGCCCGCATCCGCTCCGGTGCCCTCGCCGCCCTCGCCTCCCT
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487437.5
ENST00000489730.1
CDS-3UTR GCA 90 bp GAGGCGAGGGCGGCGAGGGCACCGGAGCGGATGCGGGCTCTGGGGCAGACGCGGGCTCTCCGCCACAGGTaGTCCAGCAGGCGCGCGCTC +
Preference number: 4 (lower is better)
Translates to: EARAARAPERMRALGQTRALRHR*SSRRAL
Trigger: GAGCGCGCGCCTGCTGGAGCACCTGTGGCGGAGAGC...CCGCGTCTGCCCCAGAGCCCGCATCCGCTCCGGTGCCCTCGCCGCCCTCGCCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487437.5
ENST00000489730.1
CDS-3UTR CCA 90 bp CAGGGAGGCGAGGGCGGCGAGGGCACCGGAGCGGATGCGGGCTCTGGGGCAGACAGCGGATGCGGGCTCTaGGGCAGACGCGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: QGGEGGEGTGADAGSGADSGCGL*GRRGRW
Trigger: CCAGCGCCCGCGTCTGCCCCAGAGCCCGCATCCGCT...GTCTGCCCCAGAGCCCGCATCCGCTCCGGTGCCCTCGCCGCCCTCGCCTCCCTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000487437.5
ENST00000489730.1
CDS-3UTR CCA 90 bp GAGGGCGGCGAGGGCACCGGAGCGGATGCGGGCTCTGGGGCAGACGCGGGCGCTCACGGGGCGCTGCCGTaGGCCATGAGGACGCAGGCA +
Preference number: 4 (lower is better)
Translates to: EGGEGTGADAGSGADAGAHGALP*AMRTQA
Trigger: TGCCTGCGTCCTCATGGCCCACGGCAGCGCCCCGTG...AGCGCCCGCGTCTGCCCCAGAGCCCGCATCCGCTCCGGTGCCCTCGCCGCCCTC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489730.1
CDS-3UTR CCA 90 bp CAGCACGCGGGCCAGGCGCGCCACACAGGCGCTGTAGCCCTCGCGGTAGCTGTCGGGCAGACGGGCCACTaGAATCCCCAGCGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: QHAGQARHTGAVALAVAVGQTGH*NPQRAR
Trigger: GCGGGCGCGCTGGGGATTCCAGTGGCCCGTCTGCCC...GACAGCTACCGCGAGGGCTACAGCGCCTGTGTGGCGCGCCTGGCCCGCGTGCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489730.1
CDS-3UTR CCA 90 bp GAGGCGAGGGCGGCGAGGGCACCGGAGCGGATGCGGGCTCTGGGGCAGACGCGGCTTCCGGCCTGGGTGTaGGTACTGGGCTGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: EARAARAPERMRALGQTRLPAWV*VLGWPL
Trigger: TAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAG...CCGCGTCTGCCCCAGAGCCCGCATCCGCTCCGGTGCCCTCGCCGCCCTCGCCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487437.5
CDS-3UTR GCA 90 bp ATCGGCCGAGGGGCTACCACGGCCGCCAGAGGCCAGGGCCGCAGGGAGGCGAGGGGAAGCGGTGGCAGCTaGGAGCCCCACGCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: IGRGATTAARGQGRREARGSGGS*EPHAKG
Trigger: TCCCTTTGCGTGGGGCTCGCAGCTGCCACCGCTTCC...CCTCGCCTCCCTGCGGCCCTGGCCTCTGGCGGCCGTGGTAGCCCCTCGGCCGAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000487437.5
ENST00000489730.1
CDS-3UTR GCA 90 bp CAGCACGCGGGCCAGGCGCGCCACACAGGCGCTGTAGCCCTCGCGGTAGCTGTCGCGGCTTCAGGCTCTTaGGCAGCTCCGCCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: QHAGQARHTGAVALAVAVAASGS*AAPPRP
Trigger: GGGACGCGGCGGAGCTGCGCAAGAGCCTGAAGCCGC...GACAGCTACCGCGAGGGCTACAGCGCCTGTGTGGCGCGCCTGGCCCGCGTGCTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489730.1
CDS-3UTR CCA 90 bp CTGGTGCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCATCCGCGGGGAAGCGGTaGCAGCTGCGAGCCCCACGC +
Preference number: 4 (lower is better)
Translates to: LVPVLGWVCRLPTQLRGPSAGKR*QLRAPR
Trigger: GCGTGGGGCTCGCAGCTGCCACCGCTTCCCCGCGGA...TGGACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGCACCAG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CCA 90 bp CAGGGAGGCGAGGGCGGCGAGGGCACCGGAGCGGATGCGGGCTCTGGGGCAGACGTCTGGTGCCAGTGCTaGGGTGGGTGTGTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: QGGEGGEGTGADAGSGADVWCQC*GGCVGC
Trigger: GCAGCCGACACACCCACCCCAGCACTGGCACCAGAC...GTCTGCCCCAGAGCCCGCATCCGCTCCGGTGCCCTCGCCGCCCTCGCCTCCCTG
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487437.5
CDS-3UTR GCA 90 bp CAGTCGGCAGGGTCTGTGGATCGGCCGAGGGGCTACCACGGCCGCCAGAGGCCAGCTCTCCGCCACAGGTaGTCCAGCAGGCGCGCGCTC +
Preference number: 4 (lower is better)
Translates to: QSAGSVDRPRGYHGRQRPALRHR*SSRRAL
Trigger: GAGCGCGCGCCTGCTGGAGCACCTGTGGCGGAGAGC...TGGCCTCTGGCGGCCGTGGTAGCCCCTCGGCCGATCCACAGACCCTGCCGACTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487437.5
CDS-3UTR GCA 90 bp GGCAGGGTCTGTGGATCGGCCGAGGGGCTACCACGGCCGCCAGAGGCCAGGGCCGGCAGGGTGCACGGCTaGACTTTGCCCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: GRVCGSAEGLPRPPEARAGRVHG*TLPRSW
Trigger: CCAGGACCTGGGCAAAGTGCAGCCGTGCACCCTGCC...GGCCCTGGCCTCTGGCGGCCGTGGTAGCCCCTCGGCCGATCCACAGACCCTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487437.5
CDS-3UTR GCA 90 bp CACAGGCGCTGTAGCCCTCGCGGTAGCTGTCGCAAGGCACTGCGGGCGGAGAGCAGGCGCGGGGTAGGGTaGCGGGTGCGGGGTGCAGAG +
Preference number: 4 (lower is better)
Translates to: HRRCSPRGSCRKALRAESRRGVG*RVRGAE
Trigger: CTCTGCACCCCGCACCCGGCACCCTACCCCGCGCCT...GCTCTCCGCCCGCAGTGCCTTGCGACAGCTACCGCGAGGGCTACAGCGCCTGTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000489730.1
CDS-3UTR TCA 90 bp GTCTGGTGCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCGCTCCCCCGAGTGCCTaGCCCTGTGAGTCACTGGCC +
Preference number: 4 (lower is better)
Translates to: VWCQCWGGCVGCPRSCGVAPPSA*PCESLA
Trigger: GGCCAGTGACTCACAGGGTCAGGCACTCGGGGGAGC...GACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGCACCAGAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp AGGGAGGCGAGGGCGGCGAGGGCACCGGAGCGGATGCGGGCTCTGGGGCAGACGGACGCAGGCAGCTCCTaGAGGAAGCGCACGGTCATT +
Preference number: 4 (lower is better)
Translates to: REARAARAPERMRALGQTDAGSS*RKRTVI
Trigger: AATGACCGTGCGCTTCCTGCAGGAGCTGCCTGCGTC...CGTCTGCCCCAGAGCCCGCATCCGCTCCGGTGCCCTCGCCGCCCTCGCCTCCCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489730.1
CDS-3UTR CCA 90 bp GAGGGCGGCGAGGGCACCGGAGCGGATGCGGGCTCTGGGGCAGACGCGGGCGCTCTAGCTTCGAGCAGTTaGAGTTCTCCCGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: EGGEGTGADAGSGADAGALASSS*SSPGPA
Trigger: TGCTGGGCCGGGAGAACTCCAACTGCTCGAAGCTAG...AGCGCCCGCGTCTGCCCCAGAGCCCGCATCCGCTCCGGTGCCCTCGCCGCCCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489730.1
CDS-3UTR TCA 90 bp GCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCAGTTCCAGCCACAAGCTTCCTTaGGGCCACGGGGCCGCCTCA +
Preference number: 4 (lower is better)
Translates to: ASAGVGVSAAHAAAGSSSSHKLP*GHGAAS
Trigger: TGAGGCGGCCCCGTGGCCTCAAGGAAGCTTGTGGCT...GGAACTGGACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp TGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGGCGAGGCAGCCCCATaGTCCGCGGGGAAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: CHASHKQPASGLGVGTGLGEAAP*SAGKRW
Trigger: CCACCGCTTCCCCGCGGAGCATGGGGCTGCCTCGCC...CAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR GCA 90 bp GTCTGGTGCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCGGCTGCCCACGCAGCTaGGGGGTCCAGTTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: VWCQCWGGCVGCPRSCGVGCPRS*GVQFQN
Trigger: GTTCTGGAACTGGACCCCGCAGCTGCGTGGGCAGCC...GACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGCACCAGAC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR GCA 90 bp GGCAGGGTCTGTGGATCGGCCGAGGGGCTACCACGGCCGCCAGAGGCCAGGGCCAGTGACCAGGCAGGGTaGACGGCTGCACTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GRVCGSAEGLPRPPEARASDQAG*TAALCP
Trigger: TGGGCAAAGTGCAGCCGTGCACCCTGCCTGGTCACT...GGCCCTGGCCTCTGGCGGCCGTGGTAGCCCCTCGGCCGATCCACAGACCCTGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000487437.5
CDS-3UTR CCA 90 bp CGAGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTGGGCAGACGGGCCACTaGAATCCCCAGCGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: RAPAPGLSVCHASHKQPAGQTGH*NPQRAR
Trigger: GCGGGCGCGCTGGGGATTCCAGTGGCCCGTCTGCCC...AGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR TCA 90 bp AGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCGGCTCAGGCTCTGGTTaGTGCGCGCGCGCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: SPSPRAFSLPRQSQTAGFGSGSG*CARAGA
Trigger: AGCGCCGGCGCGCGCGCATCAACCAGAGCCTGAGCC...GAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR GCA 90 bp CTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGATCGGCCGAGGCTCTCCGCCACAGGTaGTCCAGCAGGCGCGCGCTC +
Preference number: 4 (lower is better)
Translates to: LSSAPRSQAVGRVCGSAEALRHR*SSRRAL
Trigger: GAGCGCGCGCCTGCTGGAGCACCTGTGGCGGAGAGC...CTCGGCCGATCCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR GCA 90 bp CTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGATCGGCCGAGGGTGGGTGTGTCGGCTaGCCACGCAGCTGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: LSSAPRSQAVGRVCGSAEGGCVG*PRSCGV
Trigger: GACCCCGCAGCTGCGTGGGCAGCCGACACACCCACC...CTCGGCCGATCCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CCA 90 bp GGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTGCACACACCCCTGCGGAAGCGGATGCGGGCTCTaGGGCAGACGCGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: GEPAETFCAASSCTHPCGSGCGL*GRRGRW
Trigger: CCAGCGCCCGCGTCTGCCCCAGAGCCCGCATCCGCT...TCCGCAGGGGTGTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp ATCGGCCGAGGGGCTACCACGGCCGCCAGAGGCCAGGGCCGCAGGGAGGCGAGGGTGTGGGTACTGGGCTaGCCCCTAATGATGGGAACA +
Preference number: 4 (lower is better)
Translates to: IGRGATTAARGQGRREARVWVLG*PLMMGT
Trigger: TGTTCCCATCATTAGGGGCCAGCCCAGTACCCACAC...CCTCGCCTCCCTGCGGCCCTGGCCTCTGGCGGCCGTGGTAGCCCCTCGGCCGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487437.5
CDS-3UTR CCA 90 bp GTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGATCGGCCGAGGGAGCCGGCTTCCGGCCTaGGTGTGGGTACTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: VQCPKVPSSRQGLWIGRGSRLPA*VWVLGW
Trigger: CCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCT...CCCTCGGCCGATCCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR GCA 90 bp CCACGCAGCTGCGGGGTCCAGTTCCAGAACTATCTCCACCAGCTGGGATGGGGGGCGGCTTCAGGCTCTTaGGCAGCTCCGCCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: PRSCGVQFQNYLHQLGWGAASGS*AAPPRP
Trigger: GGGACGCGGCGGAGCTGCGCAAGAGCCTGAAGCCGC...CCCCCATCCCAGCTGGTGGAGATAGTTCTGGAACTGGACCCCGCAGCTGCGTGG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR GCA 90 bp CTGGTGCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCAGAGCCCTTAGGCTACTaGTGCTGCATGCCCAGAGGG +
Preference number: 4 (lower is better)
Translates to: LVPVLGWVCRLPTQLRGPEPLGY*CCMPRG
Trigger: CCCTCTGGGCATGCAGCAGCAGTAGCCTAAGGGCTC...TGGACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGCACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp CTGGTGCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCAAGTGAGCACCCACTGTaGACCCTGTGCCTTGGGGAC +
Preference number: 4 (lower is better)
Translates to: LVPVLGWVCRLPTQLRGPSEHPL*TLCLGD
Trigger: GTCCCCAAGGCACAGGGTGCACAGTGGGTGCTCACT...TGGACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGCACCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp GAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGGGGCAGACGGGCCACTaGAATCCCCAGCGCGCCCGC +
Preference number: 4 (lower is better)
Translates to: ELQPVQCPKVPSSRQGLWGQTGH*NPQRAR
Trigger: GCGGGCGCGCTGGGGATTCCAGTGGCCCGTCTGCCC...CCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CCA 90 bp CAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGCCCCTAATGATGGGAACAGCCGGCTTCCGGCCTaGGTGTGGGTACTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: QPASGLGVGTGLAPNDGNSRLPA*VWVLGW
Trigger: CCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCT...GTTCCCATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CCA 90 bp TGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGTGCCAGTGCTGGGGTaGGTGTGTCGGCTGCCCACG +
Preference number: 4 (lower is better)
Translates to: CHASHKQPASGLGVGTGLVPVLG*VCRLPT
Trigger: CGTGGGCAGCCGACACACCCACCCCAGCACTGGCAC...CAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR GCA 90 bp GAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGGGTGGGTGTGTCGGCTaGCCACGCAGCTGCGGGGTC +
Preference number: 4 (lower is better)
Translates to: ELQPVQCPKVPSSRQGLWGGCVG*PRSCGV
Trigger: GACCCCGCAGCTGCGTGGGCAGCCGACACACCCACC...CCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR GCA 90 bp CAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCGGCAGGGTGCACGGCTaGACTTTGCCCAGGTCCTGG +
Preference number: 4 (lower is better)
Translates to: QPQGFQSATPVTNSRLPAGRVHG*TLPRSW
Trigger: CCAGGACCTGGGCAAAGTGCAGCCGTGCACCCTGCC...GGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CCA 90 bp GCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGCAGGGGCGCTGCCGTaGGCCATGAGGACGCAGGCA +
Preference number: 4 (lower is better)
Translates to: ATKSFNLSSAPRSQAVGRAGALP*AMRTQA
Trigger: TGCCTGCGTCCTCATGGCCCACGGCAGCGCCCCTGC...CCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp AGCAGCCGCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTAGCGGATGCGGGCTCTaGGGCAGACGCGGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: SSRHQELQPVQCPKVPSSSGCGL*GRRGRW
Trigger: CCAGCGCCCGCGTCTGCCCCAGAGCCCGCATCCGCT...ACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGCGGCTGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CCA 90 bp TGGGAGAGCAGTGACCAGGCAGGGTGCACGGCTGCACTTTGCCCAGGTCCTGGCAGTCGGCAGGGTCTGTaGATCGGCCGAGGGGCTACC +
Preference number: 4 (lower is better)
Translates to: WESSDQAGCTAALCPGPGSRQGL*IGRGAT
Trigger: GGTAGCCCCTCGGCCGATCCACAGACCCTGCCGACT...GCCAGGACCTGGGCAAAGTGCAGCCGTGCACCCTGCCTGGTCACTGCTCTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CCA 90 bp CCACGCAGCTGCGGGGTCCAGTTCCAGAACTATCTCCACCAGCTGGGATGGGGGGTGCCAGTGCTGGGGTaGGTGTGTCGGCTGCCCACG +
Preference number: 4 (lower is better)
Translates to: PRSCGVQFQNYLHQLGWGVPVLG*VCRLPT
Trigger: CGTGGGCAGCCGACACACCCACCCCAGCACTGGCAC...CCCCCATCCCAGCTGGTGGAGATAGTTCTGGAACTGGACCCCGCAGCTGCGTGG
67% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CCA 90 bp GTCTGGTGCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCACAGGCTGCTGATTTaGGGACTCGGGGGAGAATCC +
Preference number: 4 (lower is better)
Translates to: VWCQCWGGCVGCPRSCGVHRLLI*GLGGES
Trigger: GGATTCTCCCCCGAGTCCCCAAATCAGCAGCCTGTG...GACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGCACCAGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp GTCTGGTGCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCCAGGGCTTTCAGTCTaGCACGCCAGTCACAAACAG +
Preference number: 4 (lower is better)
Translates to: VWCQCWGGCVGCPRSCGVPGLSV*HASHKQ
Trigger: CTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGG...GACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGCACCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CCA 90 bp AGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGCCCCTAATGATGGGAACAGTCTGGTGCCAGTGCTaGGGTGGGTGTGTCGGCTGC +
Preference number: 4 (lower is better)
Translates to: SRLPAWVWVLGWPLMMGTVWCQC*GGCVGC
Trigger: GCAGCCGACACACCCACCCCAGCACTGGCACCAGAC...TGTTCCCATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CCA 90 bp AGCCGAGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGCCCAGGTCCTGGCTCTaGCTCTGGTCTGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: SRAPAPGLSVCHASHKQPPRSWL*LWSGAS
Trigger: ACTGGCACCAGACCAGAGCCAGAGCCAGGACCTGGG...CGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCTCGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CCA 90 bp CTGGTGCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCACTGCTCACCCCACATTaGCACAGACTCTGCTGGAGT +
Preference number: 4 (lower is better)
Translates to: LVPVLGWVCRLPTQLRGPLLTPH*HRLCWS
Trigger: ACTCCAGCAGAGTCTGTGCCAATGTGGGGTGAGCAG...TGGACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGCACCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp GTCTGGTGCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCCCAGGGCATGGGAGTaGGAGTTAAGGCAAATGCCA +
Preference number: 4 (lower is better)
Translates to: VWCQCWGGCVGCPRSCGVPRAWE*ELRQMP
Trigger: TGGCATTTGCCTTAACTCCCACTCCCATGCCCTGGG...GACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGCACCAGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp CGAGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTAGTCCTAGGCGGGCTTaGGCCGCAGGTTACCTGCTC +
Preference number: 4 (lower is better)
Translates to: RAPAPGLSVCHASHKQPASPRRA*AAGYLL
Trigger: GAGCAGGTAACCTGCGGCCCAAGCCCGCCTAGGACT...AGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp ATTGTCACTGGGGCAGATCCGGAGTCAGCTCTGGGCGGAGATGGATTTACCCTGGGCTCAGGCTCTGGTTaGTGCGCGCGCGCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: IVTGADPESALGGDGFTLGSGSG*CARAGA
Trigger: AGCGCCGGCGCGCGCGCATCAACCAGAGCCTGAGCC...CAGGGTAAATCCATCTCCGCCCAGAGCTGACTCCGGATCTGCCCCAGTGACAAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377836.8
ENST00000377837.5
CDS-3UTR GCA 90 bp TGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGACGCAGGCAGCTCCTaGAGGAAGCGCACGGTCATT +
Preference number: 4 (lower is better)
Translates to: CHASHKQPASGLGVGTGLDAGSS*RKRTVI
Trigger: AATGACCGTGCGCTTCCTGCAGGAGCTGCCTGCGTC...CAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp GAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGGGCTGCCCACGCAGCTaGGGGGTCCAGTTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: ELQPVQCPKVPSSRQGLWGCPRS*GVQFQN
Trigger: GTTCTGGAACTGGACCCCGCAGCTGCGTGGGCAGCC...CCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR GCA 90 bp AAACAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGCCCCTAATGATGGGCTGGCTCTGGTCTGGTaGCAGTGCTGGGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: KQPASGLGVGTGLAPNDGLALVW*QCWGGC
Trigger: ACACCCACCCCAGCACTGGCACCAGACCAGAGCCAG...CCCATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR GCA 90 bp TGGGAGAGCAGTGACCAGGCAGGGTGCACGGCTGCACTTTGCCCAGGTCCTGGCCCCTTAGGCTACTGCTaGTGCATGCCCAGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: WESSDQAGCTAALCPGPGPLGYC*CMPRGS
Trigger: GGACCCTCTGGGCATGCAGCAGCAGTAGCCTAAGGG...GCCAGGACCTGGGCAAAGTGCAGCCGTGCACCCTGCCTGGTCACTGCTCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp AGCCGAGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGCCTGCGGAGAAACTCTaGCTTCTTGCCTGGGGCCCA +
Preference number: 4 (lower is better)
Translates to: SRAPAPGLSVCHASHKQPPAEKL*LLAWGP
Trigger: TGGGCCCCAGGCAAGAAGGCAGAGTTTCTCCGCAGG...CGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCTCGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp CAGCCGCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGCTTCCGGCCTGGGTGTaGGTACTGGGCTGGCCCCTA +
Preference number: 4 (lower is better)
Translates to: QPPPRASTCPVPQGPKQSLPAWV*VLGWPL
Trigger: TAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAG...CGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGCGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CCA 90 bp CCACGCAGCTGCGGGGTCCAGTTCCAGAACTATCTCCACCAGCTGGGATGGGGGCCCAGGTCCTGGCTCTaGCTCTGGTCTGGTGCCAGT +
Preference number: 4 (lower is better)
Translates to: PRSCGVQFQNYLHQLGWGPRSWL*LWSGAS
Trigger: ACTGGCACCAGACCAGAGCCAGAGCCAGGACCTGGG...CCCCCATCCCAGCTGGTGGAGATAGTTCTGGAACTGGACCCCGCAGCTGCGTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CCA 90 bp AGCCGAGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGCCATCAGATAGGGCTTaGGGGGCACCTGAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: SRAPAPGLSVCHASHKQPPSDRA*GAPEEE
Trigger: CTCCTCCTCAGGTGCCCCCCAAGCCCTATCTGATGG...CGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCTCGGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CAA 72 bp CTATATTCAGTGAGCACCCACTGTGCACCCTGTGCCTaGGGGACGTGGAGGCACGCTCAGCCCCAGCCTCGC +
Preference number: 4 (lower is better)
Translates to: LYSVSTHCAPCA*GTWRHAQPQPR
Trigger: GCGAGGCTGGGGCTGAGCGTGCCTCCACGTCCCCAAGGCACAGGGTGCACAGTGGGTGCTCACTGAATATAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp GTCTGGTGCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCACAGAACTGCGAACTaGGATGGACTCTCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: VWCQCWGGCVGCPRSCGVHRTAN*DGLSEA
Trigger: TGCTTCTGAGAGTCCATCTCAGTTCGCAGTTCTGTG...GACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGCACCAGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp AGCAGCCGCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCCTTCCAGGGCCCACTaGCCTCCTGACTCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: SSRHQELQPVQCPKVPSSPSRAH*PPDSGS
Trigger: GGAGCCTGAGTCAGGAGGTCAGTGGGCCCTGGAAGG...ACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGCGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp AGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGCCCCTAATGATGGGAACAAGCGCCCATCCGAGATaGACCCACAGGACACTCAGG +
Preference number: 4 (lower is better)
Translates to: SRLPAWVWVLGWPLMMGTSAHPR*THRTLR
Trigger: CCTGAGTGTCCTGTGGGTTCATCTCGGATGGGCGCT...TGTTCCCATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp AGCAGCCGCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTGGAAGCGGTGGCAGCTaGGAGCCCCACGCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: SSRHQELQPVQCPKVPSSGSGGS*EPHAKG
Trigger: TCCCTTTGCGTGGGGCTCGCAGCTGCCACCGCTTCC...ACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGCGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR GCA 90 bp TCTCCAGCCAAGTTGGGGGTGAAGCAGGGACGCTCCTTTTATTCCCTGAGCCGAGCGGCTTCAGGCTCTTaGGCAGCTCCGCCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: SPAKLGVKQGRSFYSLSRAASGS*AAPPRP
Trigger: GGGACGCGGCGGAGCTGCGCAAGAGCCTGAAGCCGC...TCGGCTCAGGGAATAAAAGGAGCGTCCCTGCTTCACCCCCAACTTGGCTGGAGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR GCA 90 bp GCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGCTGGCTCTGGTCTGGTaGCAGTGCTGGGGTGGGTGT +
Preference number: 4 (lower is better)
Translates to: ATKSFNLSSAPRSQAVGRLALVW*QCWGGC
Trigger: ACACCCACCCCAGCACTGGCACCAGACCAGAGCCAG...CCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR GCA 90 bp GCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCAGTTCCACAGCTCCCAGCATATaGACCCTTTTGCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: ASAGVGVSAAHAAAGSSSTAPSI*TLLLCS
Trigger: AGAGCAGAGCAAAAGGGTGCATATGCTGGGAGCTGT...GGAACTGGACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp TTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCTGGGTGTGGGTACGGGCCGCAGGTTACCTaGTCCCGGAGGCTCACAAAG +
Preference number: 4 (lower is better)
Translates to: FSLPRQSQTAGFRPGCGYGPQVT*SRRLTK
Trigger: CTTTGTGAGCCTCCGGGAGCAGGTAACCTGCGGCCC...GTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp CGAGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTCCAGCGGAGACCTTCTaGGCAGCTAGCTCTTGCACA +
Preference number: 4 (lower is better)
Translates to: RAPAPGLSVCHASHKQPAPAETF*AASSCT
Trigger: TGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGG...AGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp GCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGCACCTGAGGAGGAGGTaGCTGCCACTGCCTGTGGAG +
Preference number: 4 (lower is better)
Translates to: ATKSFNLSSAPRSQAVGRHLRRR*LPLPVE
Trigger: CTCCACAGGCAGTGGCAGGCACCTCCTCCTCAGGTG...CCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp AGCAGCCGCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTAGTCGGCAGGGTCTGTaGATCGGCCGAGGGGCTACC +
Preference number: 4 (lower is better)
Translates to: SSRHQELQPVQCPKVPSSSRQGL*IGRGAT
Trigger: GGTAGCCCCTCGGCCGATCCACAGACCCTGCCGACT...ACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGCGGCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CCA 90 bp CAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGCCCCTAATGATGGGAACACTTTGCCCAGGTCCTaGCTCTGGCTCTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: QPASGLGVGTGLAPNDGNTLPRS*LWLWSG
Trigger: ACCAGACCAGAGCCAGAGCCAGGACCTGGGCAAAGT...GTTCCCATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CCA 90 bp CTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGATCGGCCGAGACTTTGCCCAGGTCCTaGCTCTGGCTCTGGTCTGGT +
Preference number: 4 (lower is better)
Translates to: LSSAPRSQAVGRVCGSAETLPRS*LWLWSG
Trigger: ACCAGACCAGAGCCAGAGCCAGGACCTGGGCAAAGT...CTCGGCCGATCCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CCA 90 bp CAGCCGCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGAGCCTCCCGAGTAGCTaGCACATGCCACCACACCCG +
Preference number: 4 (lower is better)
Translates to: QPPPRASTCPVPQGPKQSSLPSS*HMPPHP
Trigger: CGGGTGTGGTGGCATGTGCCAGCTACTCGGGAGGCT...CGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGCGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp GAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGAGGGAGGTGGGAAGATaGCACGGCCTTGCTGGGAGC +
Preference number: 4 (lower is better)
Translates to: ELQPVQCPKVPSSRQGLWREVGR*HGLAGS
Trigger: GCTCCCAGCAAGGCCGTGCCATCTTCCCACCTCCCT...CCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp CCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGCACCCTGTGCCTTaGGGACGTGGAGGCACGCTC +
Preference number: 4 (lower is better)
Translates to: PRASTCPVPQGPKQSAGSVHPVP*GRGGTL
Trigger: GAGCGTGCCTCCACGTCCCCAAGGCACAGGGTGCAC...AGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp GCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCAGTTCCGCAACCTCCACCTCCTaGGTTCAACTGATTATCCCT +
Preference number: 4 (lower is better)
Translates to: ASAGVGVSAAHAAAGSSSATSTS*VQLIIP
Trigger: AGGGATAATCAGTTGAACCCAGGAGGTGGAGGTTGC...GGAACTGGACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp CCACGCAGCTGCGGGGTCCAGTTCCAGAACTATCTCCACCAGCTGGGATGGGGGGTAGAGCCCTGGAAGTaGCCAGAGCCCTTAGGCTAC +
Preference number: 4 (lower is better)
Translates to: PRSCGVQFQNYLHQLGWGVEPWK*PEPLGY
Trigger: GTAGCCTAAGGGCTCTGGTCACTTCCAGGGCTCTAC...CCCCCATCCCAGCTGGTGGAGATAGTTCTGGAACTGGACCCCGCAGCTGCGTGG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp TGCCTGATGTGGAGTCCTAGGCGGGCTTGGGCCGCAGGTTACCTGCTCCCGGAGCGCCTGTCCCAAGCCTaGGTTTCCTGGGAAATCTAC +
Preference number: 4 (lower is better)
Translates to: CLMWSPRRAWAAGYLLPERLSQA*VSWEIY
Trigger: GTAGATTTCCCAGGAAACTCAGGCTTGGGACAGGCG...CTCCGGGAGCAGGTAACCTGCGGCCCAAGCCCGCCTAGGACTCCACATCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp TTATCTTGTTATTGTCACTGGGGCAGATCCGGAGTCAGCTCTGGGCGGAGATGGGGCGAGGCAGCCCCATaGTCCGCGGGGAAGCGGTGG +
Preference number: 4 (lower is better)
Translates to: LSCYCHWGRSGVSSGRRWGEAAP*SAGKRW
Trigger: CCACCGCTTCCCCGCGGAGCATGGGGCTGCCTCGCC...CCATCTCCGCCCAGAGCTGACTCCGGATCTGCCCCAGTGACAATAACAAGATAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377836.8
ENST00000377837.5
CDS-3UTR GCA 90 bp GGGAACAGCAGCCGCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGTGACCAGGCAGGGTaGACGGCTGCACTTTGCCCA +
Preference number: 4 (lower is better)
Translates to: GNSSRHQELQPVQCPKVPSDQAG*TAALCP
Trigger: TGGGCAAAGTGCAGCCGTGCACCCTGCCTGGTCACT...TGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGCGGCTGCTGTTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR GCA 90 bp AAACAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGCCCCTAATGATGGGAAGATGGCACGGCCTTaGTGGGAGCCTCACCCTGTT +
Preference number: 4 (lower is better)
Translates to: KQPASGLGVGTGLAPNDGKMARP*WEPHPV
Trigger: AACAGGGTGAGGCTCCCAGCAAGGCCGTGCCATCTT...CCCATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp CTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGATCGGCCGAGGGCTCACAAAGGCAGTaGCAACAGGCGCTCATTCTC +
Preference number: 4 (lower is better)
Translates to: LSSAPRSQAVGRVCGSAEGSQRQ*QQALIL
Trigger: GAGAATGAGCGCCTGTTGGCACTGCCTTTGTGAGCC...CTCGGCCGATCCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp CACCCCTGCGGAGAAACTCTGCCTTCTTGCCTGGGGCCCAGAACCTTACCCACCGGCCAGTCCTGTGCCTaGCTGATGTGGAGTCCTAGG +
Preference number: 4 (lower is better)
Translates to: HPCGETLPSCLGPRTLPTGQSCA*LMWSPR
Trigger: CCTAGGACTCCACATCAGGCAGGCACAGGACTGGCC...GGTGGGTAAGGTTCTGGGCCCCAGGCAAGAAGGCAGAGTTTCTCCGCAGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp CTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGATCGGCCGAGAAAAGCCCACCGCCCTaGGTTCACCTTTGCCCATCA +
Preference number: 4 (lower is better)
Translates to: LSSAPRSQAVGRVCGSAEKSPPP*VHLCPS
Trigger: TGATGGGCAAAGGTGAACGCAGGGCGGTGGGCTTTT...CTCGGCCGATCCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp TGGGAGAGCAGTGACCAGGCAGGGTGCACGGCTGCACTTTGCCCAGGTCCTGGCGAATCAGTCTCCCTCTaGACAGGAAAAGCCCACCGC +
Preference number: 4 (lower is better)
Translates to: WESSDQAGCTAALCPGPGESVSL*TGKAHR
Trigger: GCGGTGGGCTTTTCCTGTGCAGAGGGAGACTGATTC...GCCAGGACCTGGGCAAAGTGCAGCCGTGCACCCTGCCTGGTCACTGCTCTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp CACTGGGGCAGATCCGGAGTCAGCTCTGGGCGGAGATGGATTTACCCTGGAGCTTGGCAGCTCTGGAATTaGGTCGCCGGCGCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: HWGRSGVSSGRRWIYPGAWQLWN*VAGAWN
Trigger: GTTCCAGGCGCCGGCGACGCAATTCCAGAGCTGCCA...AGCTCCAGGGTAAATCCATCTCCGCCCAGAGCTGACTCCGGATCTGCCCCAGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR CCA 90 bp AGCCGAGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGTGTGGGTACTGGGCTaGCCCCTAATGATGGGAACA +
Preference number: 4 (lower is better)
Translates to: SRAPAPGLSVCHASHKQPVWVLG*PLMMGT
Trigger: TGTTCCCATCATTAGGGGCCAGCCCAGTACCCACAC...CGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCTCGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CCA 90 bp CCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTATGGCACGGCCTTGCTaGGAGCCTCACCCTGTTGGC +
Preference number: 4 (lower is better)
Translates to: PRASTCPVPQGPKQSAGSMARPC*EPHPVG
Trigger: GCCAACAGGGTGAGGCTCCCAGCAAGGCCGTGCCAT...AGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp TTGGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTGCACACACCCCTGCGTGTGCCTGCCTGATGTaGAGTCCTAGGCGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: LESQRRPSAQLALAHTPACACLM*SPRRAW
Trigger: CCAAGCCCGCCTAGGACTCCACATCAGGCAGGCACA...CGCAGGGGTGTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp GGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTGCACACACCCCTGCGGACTCTGCCTTCTTGCCTaGGGCCCAGAACCTTACCCA +
Preference number: 4 (lower is better)
Translates to: GEPAETFCAASSCTHPCGLCLLA*GPEPYP
Trigger: TGGGTAAGGTTCTGGGCCCCAGGCAAGAAGGCAGAG...TCCGCAGGGGTGTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp CACAAACAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGCCCCTAATGATACTGCAGGAGTCGTCTaGGATCACAGGCGGGGCAGA +
Preference number: 4 (lower is better)
Translates to: HKQPASGLGVGTGLAPNDTAGVV*DHRRGR
Trigger: TCTGCCCCGCCTGTGATCCCAGACGACTCCTGCAGT...ATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp AGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCCCTCCGAGGTTCAAGTaGTTCTCTTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: SPSPRAFSLPRQSQTAGFPPRFK*FSCLSL
Trigger: GAGGCTGAGGCAAGAGAATCACTTGAACCTCGGAGG...GAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp CAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGCCCCTAATGATGGGAACGTCCACTATATTCAGTaGGCACCCACTGTGCACCCT +
Preference number: 4 (lower is better)
Translates to: QPASGLGVGTGLAPNDGNVHYIQ*APTVHP
Trigger: AGGGTGCACAGTGGGTGCTCACTGAATATAGTGGAC...GTTCCCATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp AGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCCTTCAACCTGTCCAGTaGCCCAAGGTCCCAAGCAGT +
Preference number: 4 (lower is better)
Translates to: SPSPRAFSLPRQSQTAGFLQPVQ*PKVPSS
Trigger: ACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAG...GAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR GCA 90 bp GTCTGGTGCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCCCCTGGATGTATACTaGCCCTATAATTCTGCTCTA +
Preference number: 4 (lower is better)
Translates to: VWCQCWGGCVGCPRSCGVPLDVY*PYNSAL
Trigger: TAGAGCAGAATTATAGGGGCAGTATACATCCAGGGG...GACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGCACCAGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp GCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGCATCCCTCAAATTCCTaGTGCTCCATGGCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: ATKSFNLSSAPRSQAVGRHPSNS*CSMAGA
Trigger: GGCCCCTGCCATGGAGCAGCAGGAATTTGAGGGATG...CCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp CAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCATGAGCCCCTTAAGCTaGCTCAGGCTCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: QPQGFQSATPVTNSRLPAMSPLS*LRLWLM
Trigger: CATCAACCAGAGCCTGAGCCAGCTTAAGGGGCTCAT...GGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CCA 90 bp GAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGCTAGCTTCGAGCAGTTaGAGTTCTCCCGGCCCAGCA +
Preference number: 4 (lower is better)
Translates to: ELQPVQCPKVPSSRQGLWLASSS*SSPGPA
Trigger: TGCTGGGCCGGGAGAACTCCAACTGCTCGAAGCTAG...CCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp GTGACCATCCCCACTCCCACATTGGTTCTGTCTTCTTGCCCCCGGTGCTCTGGTTTGCCCCCGGTGCTCTaGTCCCTAGCACAGGCTGCT +
Preference number: 4 (lower is better)
Translates to: VTIPTPTLVLSSCPRCSGLPPVL*SLAQAA
Trigger: AGCAGCCTGTGCTAGGGACCAGAGCACCGGGGGCAA...ACCAGAGCACCGGGGGCAAGAAGACAGAACCAATGTGGGAGTGGGGATGGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp CCACGCAGCTGCGGGGTCCAGTTCCAGAACTATCTCCACCAGCTGGGATGGGGGTACAGTCTAACCCTCTaGGCACAGGGAGGTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PRSCGVQFQNYLHQLGWGYSLTL*AQGGGK
Trigger: CTTCCCACCTCCCTGTGCCCAGAGGGTTAGACTGTA...CCCCCATCCCAGCTGGTGGAGATAGTTCTGGAACTGGACCCCGCAGCTGCGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp TGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGAGTGATCCCAGGGCATaGGAGTGGGAGTTAAGGCAA +
Preference number: 4 (lower is better)
Translates to: CHASHKQPASGLGVGTGLSDPRA*EWELRQ
Trigger: TTGCCTTAACTCCCACTCCCATGCCCTGGGATCACT...CAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp CAGCCGCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGCAGCATCCCAAGACCTaGCCATTGGGCAGGATGTGG +
Preference number: 4 (lower is better)
Translates to: QPPPRASTCPVPQGPKQSQHPKT*PLGRMW
Trigger: CCACATCCTGCCCAATGGCCAGGTCTTGGGATGCTG...CGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGCGGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp CCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTCAGCCAAGTTGGGGGTaGAGCAGGGACGCTCCTTTT +
Preference number: 4 (lower is better)
Translates to: PRASTCPVPQGPKQSAGSQPSWG*SRDAPF
Trigger: AAAAGGAGCGTCCCTGCTTCACCCCCAACTTGGCTG...AGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR TCA 90 bp TCTCCAGCCAAGTTGGGGGTGAAGCAGGGACGCTCCTTTTATTCCCTGAGCCGAAGTCCTGTGCCTGCCTaGTGTGGAGTCCTAGGCGGG +
Preference number: 4 (lower is better)
Translates to: SPAKLGVKQGRSFYSLSRSPVPA*CGVLGG
Trigger: CCCGCCTAGGACTCCACATCAGGCAGGCACAGGACT...TCGGCTCAGGGAATAAAAGGAGCGTCCCTGCTTCACCCCCAACTTGGCTGGAGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp GCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGCTTCAACCTGTCCAGTaGCCCAAGGTCCCAAGCAGT +
Preference number: 4 (lower is better)
Translates to: ATKSFNLSSAPRSQAVGRLQPVQ*PKVPSS
Trigger: ACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAG...CCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR GCA 90 bp AGCAGCCGCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCCTTTTGCTCTGCTCTaGTGCCCTGTAGAGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SSRHQELQPVQCPKVPSSPFALL*CPVEPW
Trigger: CCAGGGCTCTACAGGGCAGCAGAGCAGAGCAAAAGG...ACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGCGGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp CTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGATCGGCCGAGCATTGGCACAGACTCTaGTGGAGTCAGATCCTCCAA +
Preference number: 4 (lower is better)
Translates to: LSSAPRSQAVGRVCGSAEHWHRL*WSQILQ
Trigger: TTGGAGGATCTGACTCCAGCAGAGTCTGTGCCAATG...CTCGGCCGATCCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp AGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCAAAGTAAGAGGAACCTaGCCTCCCTCCTCTCCACAC +
Preference number: 4 (lower is better)
Translates to: SPSPRAFSLPRQSQTAGFKVRGT*PPSSPH
Trigger: GTGTGGAGAGGAGGGAGGGCAGGTTCCTCTTACTTT...GAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp AAAGGCAGTGCCAACAGGCGCTCATTCTCAGCAATGGGTGAAAGTAAGAGGAACTCCGCGGGGAAGCGGTaGCAGCTGCGAGCCCCACGC +
Preference number: 4 (lower is better)
Translates to: KGSANRRSFSAMGESKRNSAGKR*QLRAPR
Trigger: GCGTGGGGCTCGCAGCTGCCACCGCTTCCCCGCGGA...GTTCCTCTTACTTTCACCCATTGCTGAGAATGAGCGCCTGTTGGCACTGCCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CAA 72 bp CTGCTGGAGTCAGATCCTCCAAAGCCACAAGCTTCCTaGAGGCCACGGGGCCGCCTCATTCTTGTTCTGCCC +
Preference number: 4 (lower is better)
Translates to: LLESDPPKPQAS*RPRGRLILVLP
Trigger: GGGCAGAACAAGAATGAGGCGGCCCCGTGGCCTCAAGGAAGCTTGTGGCTTTGGAGGATCTGACTCCAGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp CTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGATCGGCCGAGCTGTCCTTAGGTCACTaGATCATTTCACCCGCTAGT +
Preference number: 4 (lower is better)
Translates to: LSSAPRSQAVGRVCGSAELSLGH*IISPAS
Trigger: ACTAGCGGGTGAAATGATTCAGTGACCTAAGGACAG...CTCGGCCGATCCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp TGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGCTTCTTCTTCACCCTaGTGCCTCTTGTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: CHASHKQPASGLGVGTGLASSSP*CLLSFL
Trigger: AAGAAAGGACAAGAGGCAGCAGGGTGAAGAAGAAGC...CAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR GCA 90 bp TCCTCCAAAGCCACAAGCTTCCTTGAGGCCACGGGGCCGCCTCATTCTTGTTCTGCTACTGCTGCTGCATaGCCAGAGGGTCCCAAGCAG +
Preference number: 4 (lower is better)
Translates to: SSKATSFLEATGPPHSCSATAAA*PEGPKQ
Trigger: CTGCTTGGGACCCTCTGGGCATGCAGCAGCAGTAGC...AGAACAAGAATGAGGCGGCCCCGTGGCCTCAAGGAAGCTTGTGGCTTTGGAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp CACAAACAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGCCCCTAATGATGCATATGCACCCTTTTaGTCTGCTCTGCTGCCCTGT +
Preference number: 4 (lower is better)
Translates to: HKQPASGLGVGTGLAPNDAYAPF*SALLPC
Trigger: ACAGGGCAGCAGAGCAGAGCAAAAGGGTGCATATGC...ATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp CAGCCGCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGTGCCACCCAAACCAGTaGCAAGGTCATCATGGGCTT +
Preference number: 4 (lower is better)
Translates to: QPPPRASTCPVPQGPKQSCHPNQ*QGHHGL
Trigger: AAGCCCATGATGACCTTGGCACTGGTTTGGGTGGCA...CGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGCGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp TCTCCAGCCAAGTTGGGGGTGAAGCAGGGACGCTCCTTTTATTCCCTGAGCCGAAAGGGGCCAGTCCTGTaGCTGCCTGATGTGGAGTCC +
Preference number: 4 (lower is better)
Translates to: SPAKLGVKQGRSFYSLSRKGPVL*LPDVES
Trigger: GGACTCCACATCAGGCAGGCACAGGACTGGCCCCTT...TCGGCTCAGGGAATAAAAGGAGCGTCCCTGCTTCACCCCCAACTTGGCTGGAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp CAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGCCCCTAATGATGGGAACCCTTCTCCCCGTGACTaGTTGAGTTGTAGCTTGATT +
Preference number: 4 (lower is better)
Translates to: QPASGLGVGTGLAPNDGNPSPRD*LSCSLI
Trigger: AATCAAGCTACAACTCAAGCAGTCACGGGGAGAAGG...GTTCCCATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp GAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGGAAACTCTGCCTTCTTaGCTGGGGCCCAGAACCTTA +
Preference number: 4 (lower is better)
Translates to: ELQPVQCPKVPSSRQGLWETLPS*LGPRTL
Trigger: TAAGGTTCTGGGCCCCAGGCAAGAAGGCAGAGTTTC...CCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp AGCAGCCGCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCCCTGCGTTCACCTTTaGCCATCAGATAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: SSRHQELQPVQCPKVPSSPCVHL*PSDRAW
Trigger: CCAAGCCCTATCTGATGGGCAAAGGTGAACGCAGGG...ACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGCGGCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp GAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGCACCGCACAGACCCCTaGATGTATACTGCCCCTATA +
Preference number: 4 (lower is better)
Translates to: ELQPVQCPKVPSSRQGLWHRTDP*MYTAPI
Trigger: TATAGGGGCAGTATACATCCAGGGGTCTGTGCGGTG...CCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp CAGCCGCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGAAAGACTGCATAGCCTaGGGTGCAATGCCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: QPPPRASTCPVPQGPKQSKDCIA*GAMPRC
Trigger: ACACCTGGGCATTGCACCCCAGGCTATGCAGTCTTT...CGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGCGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp CACAAACAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGCCCCTAATGATTGGCACAGACTCTGCTaGAGTCAGATCCTCCAAAGC +
Preference number: 4 (lower is better)
Translates to: HKQPASGLGVGTGLAPNDWHRLC*SQILQS
Trigger: GCTTTGGAGGATCTGACTCCAGCAGAGTCTGTGCCA...ATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp TGCCTGATGTGGAGTCCTAGGCGGGCTTGGGCCGCAGGTTACCTGCTCCCGGAGTGTGGAGGAGGATGTTaGCGTTCCTATTTCACAAGC +
Preference number: 4 (lower is better)
Translates to: CLMWSPRRAWAAGYLLPECGGGC*RSYFTS
Trigger: GCTTGTGAAATAGGAACGCCAACATCCTCCTCCACA...CTCCGGGAGCAGGTAACCTGCGGCCCAAGCCCGCCTAGGACTCCACATCAGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp GAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGAGCCTTTTCCCCAGCTaGGGCAATCATCAGACAGTC +
Preference number: 4 (lower is better)
Translates to: ELQPVQCPKVPSSRQGLWSLFPS*GNHQTV
Trigger: GACTGTCTGATGATTGCCCCAGCTGGGGAAAAGGCT...CCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp AGCCGAGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGAGTAACCAGTCTCAATaGGTAGCAGGGAGTAGTTTG +
Preference number: 4 (lower is better)
Translates to: SRAPAPGLSVCHASHKQPSNQSQ*VAGSSL
Trigger: CAAACTACTCCCTGCTACTCATTGAGACTGGTTACT...CGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCTCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp CAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCTTCATGAATCCCCCATaGAATGATGGGTGTTTGCCT +
Preference number: 4 (lower is better)
Translates to: QPQGFQSATPVTNSRLPAFMNPP*NDGCLP
Trigger: AGGCAAACACCCATCATTTCATGGGGGATTCATGAA...GGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp TGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGAGGATGTGGGACTTGTaGAAGGTCATAAATGACCCT +
Preference number: 4 (lower is better)
Translates to: CHASHKQPASGLGVGTGLRMWDL*KVINDP
Trigger: AGGGTCATTTATGACCTTTCACAAGTCCCACATCCT...CAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp TTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCTGGGTGTGGGTACTGCCCACTGGTTTTATaGGAAAGAGACATGGGAGCC +
Preference number: 4 (lower is better)
Translates to: FSLPRQSQTAGFRPGCGYCPLVL*ERDMGA
Trigger: GGCTCCCATGTCTCTTTCTCATAAAACCAGTGGGCA...GTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp AGCCGAGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGTCACTCACGTGGAAATaGGATTCGACCTCTCCTAAT +
Preference number: 4 (lower is better)
Translates to: SRAPAPGLSVCHASHKQPSLTWK*DSTSPN
Trigger: ATTAGGAGAGGTCGAATCTCATTTCCACGTGAGTGA...CGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCTCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp AGCCGAGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGATTTGTCAATGTTTATaGGGAGTCCTCCTTGGCAGC +
Preference number: 4 (lower is better)
Translates to: SRAPAPGLSVCHASHKQPICQCL*GVLLGS
Trigger: GCTGCCAAGGAGGACTCCTCATAAACATTGACAAAT...CGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCTCGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp CCACGCAGCTGCGGGGTCCAGTTCCAGAACTATCTCCACCAGCTGGGATGGGGGGCTTCTTCTTCACCCTaGTGCCTCTTGTCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: PRSCGVQFQNYLHQLGWGASSSP*CLLSFL
Trigger: AAGAAAGGACAAGAGGCAGCAGGGTGAAGAAGAAGC...CCCCCATCCCAGCTGGTGGAGATAGTTCTGGAACTGGACCCCGCAGCTGCGTGG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR GCA 90 bp GGGAACAGCAGCCGCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAGCTTCCTTCATATCCTaGCACCCAAACCAGTGCCAA +
Preference number: 4 (lower is better)
Translates to: GNSSRHQELQPVQCPKVPASFIS*HPNQCQ
Trigger: TTGGCACTGGTTTGGGTGGCAGGATATGAAGGAAGC...TGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGCGGCTGCTGTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp GTGACCATCCCCACTCCCACATTGGTTCTGTCTTCTTGCCCCCGGTGCTCTGGTCTCAGGATCCCAGACTaGAGGAGTCGTCTGGGATCA +
Preference number: 4 (lower is better)
Translates to: VTIPTPTLVLSSCPRCSGLRIPD*RSRLGS
Trigger: TGATCCCAGACGACTCCTGCAGTCTGGGATCCTGAG...ACCAGAGCACCGGGGGCAAGAAGACAGAACCAATGTGGGAGTGGGGATGGTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp ATCTTGTTATTGTCACTGGGGCAGATCCGGAGTCAGCTCTGGGCGGAGATGGATTCGCCCAGCCTGGAGTaGAGTGGCGTGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: ILLLSLGQIRSQLWAEMDSPSLE*SGVISA
Trigger: AGCCGAGATCACGCCACTGCACTCCAGGCTGGGCGA...ATCCATCTCCGCCCAGAGCTGACTCCGGATCTGCCCCAGTGACAATAACAAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR CCA 90 bp AGCAGCCGCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCTGTGTCACCCAGGCTaGAGAGCAATGGCTCAATCT +
Preference number: 4 (lower is better)
Translates to: SSRHQELQPVQCPKVPSSLCHPG*RAMAQS
Trigger: AGATTGAGCCATTGCTCTCCAGCCTGGGTGACACAG...ACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGCGGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp CTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGATCGGCCGAGGCTCATTCTCAGCAATaGGTGAAAGTAAGAGGAACC +
Preference number: 4 (lower is better)
Translates to: LSSAPRSQAVGRVCGSAEAHSQQ*VKVRGT
Trigger: GGTTCCTCTTACTTTCACCCATTGCTGAGAATGAGC...CTCGGCCGATCCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp GAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGAAGCGAGGGTCCTCCTaGCTGGTTAGATCTTACAGA +
Preference number: 4 (lower is better)
Translates to: ELQPVQCPKVPSSRQGLWKRGSS*LVRSYR
Trigger: TCTGTAAGATCTAACCAGCCAGGAGGACCCTCGCTT...CCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp TCCTCCAAAGCCACAAGCTTCCTTGAGGCCACGGGGCCGCCTCATTCTTGTTCTTTCACAAGCCCGGCTTaGAGAGCCAGCGGAGACCTT +
Preference number: 4 (lower is better)
Translates to: SSKATSFLEATGPPHSCSFTSPA*RASGDL
Trigger: AAGGTCTCCGCTGGCTCTCCAAGCCGGGCTTGTGAA...AGAACAAGAATGAGGCGGCCCCGTGGCCTCAAGGAAGCTTGTGGCTTTGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp CAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCCATCAGACAGTCACATaGAGTCACAGAACCATCTTG +
Preference number: 4 (lower is better)
Translates to: QPQGFQSATPVTNSRLPAHQTVT*SHRTIL
Trigger: CAAGATGGTTCTGTGACTCCATGTGACTGTCTGATG...GGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp CACCCCTGCGGAGAAACTCTGCCTTCTTGCCTGGGGCCCAGAACCTTACCCACCCCCGGCCTTGCCCACTaGTTTTATGAGAAAGAGACA +
Preference number: 4 (lower is better)
Translates to: HPCGETLPSCLGPRTLPTPGLAH*FYEKET
Trigger: TGTCTCTTTCTCATAAAACCAGTGGGCAAGGCCGGG...GGTGGGTAAGGTTCTGGGCCCCAGGCAAGAAGGCAGAGTTTCTCCGCAGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp TGGCGGAGAGGAAGCGAGGGTCCTCCTGGCTGGTTAGATCTTACAGAGTTTAAGAGCCTCCCAAGTAGCTaGGGTTACAGGCACCCGCCG +
Preference number: 4 (lower is better)
Translates to: WRRGSEGPPGWLDLTEFKSLPSS*GYRHPP
Trigger: CGGCGGGTGCCTGTAACCCCAGCTACTTGGGAGGCT...CTTAAACTCTGTAAGATCTAACCAGCCAGGAGGACCCTCGCTTCCTCTCCGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CAA 72 bp AGGAGGATGTTGGCGTTCCTATTTCACAAGCCCGGCTaGGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCT +
Preference number: 4 (lower is better)
Translates to: RRMLAFLFHKPG*ESQRRPSAQLA
Trigger: AGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCCAAGCCGGGCTTGTGAAATAGGAACGCCAACATCCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp TACGAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTGGGGCAGATCCGGAGGCTCAGGCTCTGGTTaGTGCGCGCGCGCCGGCGCT +
Preference number: 4 (lower is better)
Translates to: YEENGRHLSCYCHWGRSGGSGSG*CARAGA
Trigger: AGCGCCGGCGCGCGCGCATCAACCAGAGCCTGAGCC...TCCGGATCTGCCCCAGTGACAATAACAAGATAAATGCCTTCCATTCTCTTCGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377836.8
ENST00000377837.5
CDS-3UTR GCA 90 bp TCATATCCTGCCACCCAAACCAGTGCCAAGGTCATCATGGGCTTGTGTGGCACAATTATGGGCCAACAGTaGCCCCCACTCCTCGTGGGC +
Preference number: 4 (lower is better)
Translates to: SYPATQTSAKVIMGLCGTIMGQQ*PPLLVG
Trigger: GCCCACGAGGAGTGGGGGGCACTGTTGGCCCATAAT...TGTGCCACACAAGCCCATGATGACCTTGGCACTGGTTTGGGTGGCAGGATATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp TTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCTGGGTGTGGGTACGTCACAGAACCATCTTaGAACAGCATCCCAAGACCT +
Preference number: 4 (lower is better)
Translates to: FSLPRQSQTAGFRPGCGYVTEPS*NSIPRP
Trigger: AGGTCTTGGGATGCTGTTGCAAGATGGTTCTGTGAC...GTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp ATCTTGTTATTGTCACTGGGGCAGATCCGGAGTCAGCTCTGGGCGGAGATGGATAGGGGAAGCCAGGTGTaGCAGCCAGAAGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: ILLLSLGQIRSQLWAEMDRGSQV*QPEASS
Trigger: GGAGGATGCTTCTGGCTGGCACACCTGGCTTCCCCT...ATCCATCTCCGCCCAGAGCTGACTCCGGATCTGCCCCAGTGACAATAACAAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377836.8
ENST00000377837.5
CDS-3UTR CCA 90 bp CTTCCTTCATATCCTGCCACCCAAACCAGTGCCAAGGTCATCATGGGCTTGTGTCCTCGTGGGCACTCCTaGGATCAGCAGCCCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LPSYPATQTSAKVIMGLCPRGHS*DQQPLP
Trigger: AGGAAGGGGCTGCTGATCCCAGGAGTGCCCACGAGG...ACACAAGCCCATGATGACCTTGGCACTGGTTTGGGTGGCAGGATATGAAGGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp TTGGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTGCACACACCCCTGCGGAGGGTCCTCCTGGCTaGTTAGATCTTACAGAGTTT +
Preference number: 4 (lower is better)
Translates to: LESQRRPSAQLALAHTPAEGPPG*LDLTEF
Trigger: AAACTCTGTAAGATCTAACCAGCCAGGAGGACCCTC...CGCAGGGGTGTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp TCTCCAGCCAAGTTGGGGGTGAAGCAGGGACGCTCCTTTTATTCCCTGAGCCGACCAAGACCTGGCCATTaGGCAGGATGTGGGACTTGT +
Preference number: 4 (lower is better)
Translates to: SPAKLGVKQGRSFYSLSRPRPGH*AGCGTC
Trigger: ACAAGTCCCACATCCTGCCCAATGGCCAGGTCTTGG...TCGGCTCAGGGAATAAAAGGAGCGTCCCTGCTTCACCCCCAACTTGGCTGGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp GCAGATCCGGAGTCAGCTCTGGGCGGAGATGGATTTACCCTGGAGCTGCTGAAGCACTGGGCAGATGAATaGATTTGTCTGTGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: ADPESALGGDGFTLELLKHWADE*ICLCLD
Trigger: GTCCAGGCACAGACAAATTCATTCATCTGCCCAGTG...CTTCAGCAGCTCCAGGGTAAATCCATCTCCGCCCAGAGCTGACTCCGGATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR GCA 90 bp GAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGGAAATGATGGGTGTTTaGCTGATTATGGGCCAACAG +
Preference number: 4 (lower is better)
Translates to: ELQPVQCPKVPSSRQGLWEMMGV*LIMGQQ
Trigger: CTGTTGGCCCATAATCAGGCAAACACCCATCATTTC...CCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp CTGCTGCCCTGTAGAGCCCTGGAAGTGACCAGAGCCCTTAGGCTACTGCTGCTGTTGGAGCCAGGTCAATaGAAGTCACAGAACTGCGAA +
Preference number: 4 (lower is better)
Translates to: LLPCRALEVTRALRLLLLLEPGQ*KSQNCE
Trigger: TTCGCAGTTCTGTGACTTGCATTGACCTGGCTCCAA...CAGCAGCAGTAGCCTAAGGGCTCTGGTCACTTCCAGGGCTCTACAGGGCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp TCATATCCTGCCACCCAAACCAGTGCCAAGGTCATCATGGGCTTGTGTGGCACATGCGCAGCTAGCTCTTaGACACACCCCTGCGGAGAA +
Preference number: 4 (lower is better)
Translates to: SYPATQTSAKVIMGLCGTCAASS*THPCGE
Trigger: TTCTCCGCAGGGGTGTGTGCAAGAGCTAGCTGCGCA...TGTGCCACACAAGCCCATGATGACCTTGGCACTGGTTTGGGTGGCAGGATATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp GTGACCATCCCCACTCCCACATTGGTTCTGTCTTCTTGCCCCCGGTGCTCTGGTCCATATTGGCTAAGCTaGTCTCGAACTCCTGACCTC +
Preference number: 4 (lower is better)
Translates to: VTIPTPTLVLSSCPRCSGPYWLS*SRTPDL
Trigger: GAGGTCAGGAGTTCGAGACCAGCTTAGCCAATATGG...ACCAGAGCACCGGGGGCAAGAAGACAGAACCAATGTGGGAGTGGGGATGGTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp CTGCTGCCCTGTAGAGCCCTGGAAGTGACCAGAGCCCTTAGGCTACTGCTGCTGACATTTCAGCACAGATaGGTTCCCAGCAGCTTAGTG +
Preference number: 4 (lower is better)
Translates to: LLPCRALEVTRALRLLLLTFQHR*VPSSLV
Trigger: CACTAAGCTGCTGGGAACCCATCTGTGCTGAAATGT...CAGCAGCAGTAGCCTAAGGGCTCTGGTCACTTCCAGGGCTCTACAGGGCAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CAA 72 bp CCTGCCACCCAAACCAGTGCCAAGGTCATCATGGGCTaGTGTGGCACAGTCAGATTTAGTGACCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: PATQTSAKVIMG*CGTVRFSDHPH
Trigger: GTGGGGATGGTCACTAAATCTGACTGTGCCACACAAGCCCATGATGACCTTGGCACTGGTTTGGGTGGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CAA 72 bp AGGAGTCGTCTGGGATCACAGGCGGGGCAGAGCAATTaGTCAATGTTTATGAGGAGTCCTCCTTGGCAGCCC +
Preference number: 4 (lower is better)
Translates to: RSRLGSQAGQSN*SMFMRSPPWQP
Trigger: GGGCTGCCAAGGAGGACTCCTCATAAACATTGACAAATTGCTCTGCCCCGCCTGTGATCCCAGACGACTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp GGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTGCACACACCCCTGCGGACTGACTATGATTTCATaGATCCCCCATGAAATGATG +
Preference number: 4 (lower is better)
Translates to: GEPAETFCAASSCTHPCGLTMIS*IPHEMM
Trigger: CATCATTTCATGGGGGATTCATGAAATCATAGTCAG...TCCGCAGGGGTGTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp TCATATCCTGCCACCCAAACCAGTGCCAAGGTCATCATGGGCTTGTGTGGCACATTTGCTCTGCTCTGCTaGCCTGTAGAGCCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: SYPATQTSAKVIMGLCGTFALLC*PVEPWK
Trigger: CTTCCAGGGCTCTACAGGGCAGCAGAGCAGAGCAAA...TGTGCCACACAAGCCCATGATGACCTTGGCACTGGTTTGGGTGGCAGGATATGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp TTGGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTGCACACACCCCTGCGGAATCCTCCACCTTCTaGAAATGCTTAGCCATGAAA +
Preference number: 4 (lower is better)
Translates to: LESQRRPSAQLALAHTPAESSTF*KCLAMK
Trigger: TTTCATGGCTAAGCATTTGCAGAAGGTGGAGGATTC...CGCAGGGGTGTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp TTGGAGAGCCAGCGGAGACCTTCTGCGCAGCTAGCTCTTGCACACACCCCTGCGAGTCCTCTCATCCTCTaGTCACTAGTCCACTATATT +
Preference number: 4 (lower is better)
Translates to: LESQRRPSAQLALAHTPASPLIL*SLVHYI
Trigger: AATATAGTGGACTAGTGAGCAGAGGATGAGAGGACT...CGCAGGGGTGTGTGCAAGAGCTAGCTGCGCAGAAGGTCTCCGCTGGCTCTCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp AAAGGCAGTGCCAACAGGCGCTCATTCTCAGCAATGGGTGAAAGTAAGAGGAACGGAGGTGCCTGCCACTaGCTGTGGAGGAGGATGTTG +
Preference number: 4 (lower is better)
Translates to: KGSANRRSFSAMGESKRNGGACH*LWRRML
Trigger: CAACATCCTCCTCCACAGGCAGTGGCAGGCACCTCC...GTTCCTCTTACTTTCACCCATTGCTGAGAATGAGCGCCTGTTGGCACTGCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp CAACATTTTCCCACGAGCATGTGCCCACTTTGTATCTGTGTGTCACACTTTCGCCCCTCAAATTCCTGCTaGTCCATGGCAGGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: QHFPTSMCPLCICVSHFRPSNSC*SMAGAL
Trigger: CAGGGCCCCTGCCATGGAGCAGCAGGAATTTGAGGG...GCGAAAGTGTGACACACAGATACAAAGTGGGCACATGCTCGTGGGAAAATGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp AGCAGCCGCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTTCCCATTCTTTAACCTaGTCCATCCCTCAAATTCCT +
Preference number: 4 (lower is better)
Translates to: SSRHQELQPVQCPKVPSSSHSLT*SIPQIP
Trigger: AGGAATTTGAGGGATGGAGCAGGTTAAAGAATGGGA...ACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGCGGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp ATGGAAGGCATTTATCTTGTTATTGTCACTGGGGCAGATCCGGAGTCAGCTCTGAGGGGAAGCCAGGTGTaGCAGCCAGAAGCATCCTCC +
Preference number: 4 (lower is better)
Translates to: MEGIYLVIVTGADPESALRGSQV*QPEASS
Trigger: GGAGGATGCTTCTGGCTGGCACACCTGGCTTCCCCT...CAGAGCTGACTCCGGATCTGCCCCAGTGACAATAACAAGATAAATGCCTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377836.8
ENST00000377837.5
CDS-3UTR CCA 90 bp CCGCAAATGAAACACTGTGTAAATATGTGGATTACATCCTGTAAGTACGAAGAGTCCGCGGGGAAGCGGTaGCAGCTGCGAGCCCCACGC +
Preference number: 4 (lower is better)
Translates to: PQMKHCVNMWITSCKYEESAGKR*QLRAPR
Trigger: GCGTGGGGCTCGCAGCTGCCACCGCTTCCCCGCGGA...CTCTTCGTACTTACAGGATGTAATCCACATATTTACACAGTGTTTCATTTGCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377836.8
CDS-3UTR CCA 90 bp GTGACCATCCCCACTCCCACATTGGTTCTGTCTTCTTGCCCCCGGTGCTCTGGTGTCAAGCAAGTCTATTaGCAACATTTTCCCACGAGC +
Preference number: 4 (lower is better)
Translates to: VTIPTPTLVLSSCPRCSGVKQVY*QHFPTS
Trigger: GCTCGTGGGAAAATGTTGCCAATAGACTTGCTTGAC...ACCAGAGCACCGGGGGCAAGAAGACAGAACCAATGTGGGAGTGGGGATGGTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp TCATATCCTGCCACCCAAACCAGTGCCAAGGTCATCATGGGCTTGTGTGGCACAGTAAATATCCAACAGTaGTCCCAGGGCATGGGAGTG +
Preference number: 4 (lower is better)
Translates to: SYPATQTSAKVIMGLCGTVNIQQ*SQGMGV
Trigger: CACTCCCATGCCCTGGGATCACTGTTGGATATTTAC...TGTGCCACACAAGCCCATGATGACCTTGGCACTGGTTTGGGTGGCAGGATATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp CCGCAAATGAAACACTGTGTAAATATGTGGATTACATCCTGTAAGTACGAAGAGGCGGCTTCAGGCTCTTaGGCAGCTCCGCCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: PQMKHCVNMWITSCKYEEAASGS*AAPPRP
Trigger: GGGACGCGGCGGAGCTGCGCAAGAGCCTGAAGCCGC...CTCTTCGTACTTACAGGATGTAATCCACATATTTACACAGTGTTTCATTTGCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377836.8
ENST00000377837.5
CDS-3UTR GCA 90 bp TCATATCCTGCCACCCAAACCAGTGCCAAGGTCATCATGGGCTTGTGTGGCACACTCACACTGAAAGACTaGATAGCCTGGGGTGCAATG +
Preference number: 4 (lower is better)
Translates to: SYPATQTSAKVIMGLCGTLTLKD*IAWGAM
Trigger: CATTGCACCCCAGGCTATGCAGTCTTTCAGTGTGAG...TGTGCCACACAAGCCCATGATGACCTTGGCACTGGTTTGGGTGGCAGGATATGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp GAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGTGCAGTTCACTTTATTaGACGTCAAGATATTGCCTT +
Preference number: 4 (lower is better)
Translates to: ELQPVQCPKVPSSRQGLWCSSLY*TSRYCL
Trigger: AAGGCAATATCTTGACGTGCAATAAAGTGAACTGCA...CCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp TCCTGTAAGTACGAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTGGGGCAAGCGGTGGCAGCTCTaGAATTGCGTCGCCGGCGCC +
Preference number: 4 (lower is better)
Translates to: SCKYEENGRHLSCYCHWGKRWQL*NCVAGA
Trigger: GGCGCCGGCGACGCAATTCCAGAGCTGCCACCGCTT...GCCCCAGTGACAATAACAAGATAAATGCCTTCCATTCTCTTCGTACTTACAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR GCA 90 bp GTAAGTACGAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTGGGGCAGATGGAAGCGGTGGCAGCTaGGAGCCCCACGCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: VSTKRMEGIYLVIVTGADGSGGS*EPHAKG
Trigger: TCCCTTTGCGTGGGGCTCGCAGCTGCCACCGCTTCC...ATCTGCCCCAGTGACAATAACAAGATAAATGCCTTCCATTCTCTTCGTACTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377836.8
CDS-3UTR GCA 90 bp CAACATTTTCCCACGAGCATGTGCCCACTTTGTATCTGTGTGTCACACTTTCGCTTAGGCTACTGCTGCTaGATGCCCAGAGGGTCCCAA +
Preference number: 4 (lower is better)
Translates to: QHFPTSMCPLCICVSHFRLGYCC*MPRGSQ
Trigger: TTGGGACCCTCTGGGCATGCAGCAGCAGTAGCCTAA...GCGAAAGTGTGACACACAGATACAAAGTGGGCACATGCTCGTGGGAAAATGTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp GTAAGTACGAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTGGGGCAGATAGCCCCTGGGCACCTTaGCCCAGTCGCACGAGTGTC +
Preference number: 4 (lower is better)
Translates to: VSTKRMEGIYLVIVTGADSPWAP*PSRTSV
Trigger: GACACTCGTGCGACTGGGGCAAGGTGCCCAGGGGCT...ATCTGCCCCAGTGACAATAACAAGATAAATGCCTTCCATTCTCTTCGTACTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377837.5
3UTR CAA 72 bp CACTGGCCCATCTACAATCCTTCTCCCCGTGACTGCTaGAGTTGTAGCTTGATTGGAGCCAGGTCAATGCAA +
Preference number: 4 (lower is better)
Translates to: HWPIYNPSPRDC*SCSLIGARSMQ
Trigger: TTGCATTGACCTGGCTCCAATCAAGCTACAACTCAAGCAGTCACGGGGAGAAGGATTGTAGATGGGCCAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
3UTR CAA 72 bp AATCATCAGACAGTCACATGGAGTCACAGAACCATCTaGCAACAGCATCCCAAGACCTGGCCATTGGGCAGG +
Preference number: 4 (lower is better)
Translates to: NHQTVTWSHRTI*QQHPKTWPLGR
Trigger: CCTGCCCAATGGCCAGGTCTTGGGATGCTGTTGCAAGATGGTTCTGTGACTCCATGTGACTGTCTGATGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp TTCAAACTTCTTCCTTATTATATCTGTTGTGAAGCTGGTTCTCCCAGACGTTCCCCTAGCACAGGCTGCTaGTTTGGGGACTCGGGGGAG +
Preference number: 4 (lower is better)
Translates to: FKLLPYYICCEAGSPRRSPSTGC*FGDSGE
Trigger: CTCCCCCGAGTCCCCAAATCAGCAGCCTGTGCTAGG...GGAACGTCTGGGAGAACCAGCTTCACAACAGATATAATAAGGAAGAAGTTTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR GCA 90 bp TGTGTAAATATGTGGATTACATCCTGTAAGTACGAAGAGAATGGAAGGCATTTAGCGGCTTCAGGCTCTTaGGCAGCTCCGCCGCGTCCC +
Preference number: 4 (lower is better)
Translates to: CVNMWITSCKYEENGRHLAASGS*AAPPRP
Trigger: GGGACGCGGCGGAGCTGCGCAAGAGCCTGAAGCCGC...TAAATGCCTTCCATTCTCTTCGTACTTACAGGATGTAATCCACATATTTACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377836.8
ENST00000377837.5
CDS-3UTR CCA 90 bp GGTGTATGGTCTGCGGCCATTGACTCAAGCACAGGGAATGAGAACTTCTGGAAGGAATTTGTCTGTGCCTaGACGGCTCTCCAATTCGAA +
Preference number: 4 (lower is better)
Translates to: GVWSAAIDSSTGNENFWKEFVCA*TALQFE
Trigger: TTCGAATTGGAGAGCCGTCCAGGCACAGACAAATTC...CTTCCAGAAGTTCTCATTCCCTGTGCTTGAGTCAATGGCCGCAGACCATACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR CCA 90 bp GTAAGTACGAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTGGGGCAGATTCCGCGGGGAAGCGGTaGCAGCTCTGGAATTGCGTC +
Preference number: 4 (lower is better)
Translates to: VSTKRMEGIYLVIVTGADSAGKR*QLWNCV
Trigger: GACGCAATTCCAGAGCTGCCACCGCTTCCCCGCGGA...ATCTGCCCCAGTGACAATAACAAGATAAATGCCTTCCATTCTCTTCGTACTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR CCA 90 bp CAACATTTTCCCACGAGCATGTGCCCACTTTGTATCTGTGTGTCACACTTTCGCATGAGGAGTCCTCCTTaGCAGCCCAGTCTTTATCCT +
Preference number: 4 (lower is better)
Translates to: QHFPTSMCPLCICVSHFRMRSPP*QPSLYP
Trigger: AGGATAAAGACTGGGCTGCCAAGGAGGACTCCTCAT...GCGAAAGTGTGACACACAGATACAAAGTGGGCACATGCTCGTGGGAAAATGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp AAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTGGGGCAGATCCGGAGTCATCTTGTTATTGTCACTaGGGCAGATCCGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: KRMEGIYLVIVTGADPESSCYCH*GRSGVS
Trigger: GCTGACTCCGGATCTGCCCCAGTGACAATAACAAGA...TGACTCCGGATCTGCCCCAGTGACAATAACAAGATAAATGCCTTCCATTCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377836.8
ENST00000377837.5
3UTR CAA 72 bp AGATTAACTTGCTCTCAGGTGTATGGTCTGCGGCCATaGACTCAAGCACAGGGAATGAGAACTTCTGGAAGT +
Preference number: 4 (lower is better)
Translates to: RLTCSQVYGLRP*TQAQGMRTSGS
Trigger: ACTTCCAGAAGTTCTCATTCCCTGTGCTTGAGTCAATGGCCGCAGACCATACACCTGAGAGCAAGTTAATCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR GCA 90 bp TCCTGTAAGTACGAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTGGGGCATTCGAACCCAGTTTTaGTGCCCTCTGGGGTCTCAA +
Preference number: 4 (lower is better)
Translates to: SCKYEENGRHLSCYCHWGIRTQF*CPLGSQ
Trigger: TTGAGACCCCAGAGGGCAGCAAAACTGGGTTCGAAT...GCCCCAGTGACAATAACAAGATAAATGCCTTCCATTCTCTTCGTACTTACAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR CCA 90 bp CCACTTTGTATCTGTGTGTCACACTTTCGCAATTCTTGCAATATTTCAAACTTCAAGAGGTGGCAAGCATaGCGGAGAGGAAGCGAGGGT +
Preference number: 4 (lower is better)
Translates to: PLCICVSHFRNSCNISNFKRWQA*RRGSEG
Trigger: ACCCTCGCTTCCTCTCCGCCATGCTTGCCACCTCTT...GAAGTTTGAAATATTGCAAGAATTGCGAAAGTGTGACACACAGATACAAAGTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp CCTGTAAGTACGAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTGGGGCATCTTGTTATTGTCACTaGGGCAGATCCGGAGTCAGC +
Preference number: 4 (lower is better)
Translates to: PVSTKRMEGIYLVIVTGASCYCH*GRSGVS
Trigger: GCTGACTCCGGATCTGCCCCAGTGACAATAACAAGA...TGCCCCAGTGACAATAACAAGATAAATGCCTTCCATTCTCTTCGTACTTACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377836.8
ENST00000377837.5
CDS-3UTR TCA 90 bp TTACATCCTGTAAGTACGAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTGTGGGCCTGGACATCTaGATTGCACAGGCTTCCCAG +
Preference number: 4 (lower is better)
Translates to: LHPVSTKRMEGIYLVIVTVGLDI*IAQASQ
Trigger: CTGGGAAGCCTGTGCAATTCAGATGTCCAGGCCCAC...AGTGACAATAACAAGATAAATGCCTTCCATTCTCTTCGTACTTACAGGATGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR CCA 90 bp GGTGTATGGTCTGCGGCCATTGACTCAAGCACAGGGAATGAGAACTTCTGGAAGCACTGTGTAAATATGTaGATTACATCCTGTAAGTAC +
Preference number: 4 (lower is better)
Translates to: GVWSAAIDSSTGNENFWKHCVNM*ITSCKY
Trigger: GTACTTACAGGATGTAATCCACATATTTACACAGTG...CTTCCAGAAGTTCTCATTCCCTGTGCTTGAGTCAATGGCCGCAGACCATACACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR CCA 90 bp AAGTACGAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTGGGGCAGATCCGAGAACTTCTGGAAGTaGGCCTGGACATCTGAATTG +
Preference number: 4 (lower is better)
Translates to: KYEENGRHLSCYCHWGRSENFWK*AWTSEL
Trigger: CAATTCAGATGTCCAGGCCCACTTCCAGAAGTTCTC...GGATCTGCCCCAGTGACAATAACAAGATAAATGCCTTCCATTCTCTTCGTACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR TCA 90 bp TCCTGTAAGTACGAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTGGGGCGTCTCAACTGTTACGTaGGGCAAATTAGGAGAGAAG +
Preference number: 4 (lower is better)
Translates to: SCKYEENGRHLSCYCHWGVSTVT*GKLGEK
Trigger: CTTCTCTCCTAATTTGCCTCACGTAACAGTTGAGAC...GCCCCAGTGACAATAACAAGATAAATGCCTTCCATTCTCTTCGTACTTACAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR GCA 90 bp TTCAAACTTCTTCCTTATTATATCTGTTGTGAAGCTGGTTCTCCCAGACGTTCCTGCAAGTCACAGAACTaGGAACTGAGATGGACTCTC +
Preference number: 4 (lower is better)
Translates to: FKLLPYYICCEAGSPRRSCKSQN*ELRWTL
Trigger: GAGAGTCCATCTCAGTTCGCAGTTCTGTGACTTGCA...GGAACGTCTGGGAGAACCAGCTTCACAACAGATATAATAAGGAAGAAGTTTGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp CCACTTTGTATCTGTGTGTCACACTTTCGCAATTCTTGCAATATTTCAAACTTCGTGCCAAGGTCATCATaGGCTTGTGTGGCACAGTCA +
Preference number: 4 (lower is better)
Translates to: PLCICVSHFRNSCNISNFVPRSS*ACVAQS
Trigger: TGACTGTGCCACACAAGCCCATGATGACCTTGGCAC...GAAGTTTGAAATATTGCAAGAATTGCGAAAGTGTGACACACAGATACAAAGTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR TCA 90 bp GTAAATATGTGGATTACATCCTGTAAGTACGAAGAGAATGGAAGGCATTTATCTCTCAAGCACAGGGAATaGGAACTTCTGGAAGTGGGC +
Preference number: 4 (lower is better)
Translates to: VNMWITSCKYEENGRHLSLKHRE*ELLEVG
Trigger: GCCCACTTCCAGAAGTTCTCATTCCCTGTGCTTGAG...AGATAAATGCCTTCCATTCTCTTCGTACTTACAGGATGTAATCCACATATTTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR CCA 90 bp AAACACTGTGTAAATATGTGGATTACATCCTGTAAGTACGAAGAGAATGGAAGGTTCTGGAAGTGGGCCTaGACATCTGAATTGCACAGG +
Preference number: 4 (lower is better)
Translates to: KHCVNMWITSCKYEENGRFWKWA*TSELHR
Trigger: CCTGTGCAATTCAGATGTCCAGGCCCACTTCCAGAA...CCTTCCATTCTCTTCGTACTTACAGGATGTAATCCACATATTTACACAGTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377837.5
3UTR CAA 72 bp TTCTTAGATGTGATATCTTTGTTAGAGCAGATTAACTaGCTCTCAGGTGTATGGTCTGCGGCCATTGACTCA +
Preference number: 4 (lower is better)
Translates to: FLDVISLLEQIN*LSGVWSAAIDS
Trigger: TGAGTCAATGGCCGCAGACCATACACCTGAGAGCAAGTTAATCTGCTCTAACAAAGATATCACATCTAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR GCA 90 bp TTACATCCTGTAAGTACGAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTCCTGGACATCTGAATTaGACAGGCTTCCCAGATAGG +
Preference number: 4 (lower is better)
Translates to: LHPVSTKRMEGIYLVIVTPGHLN*TGFPDR
Trigger: CCTATCTGGGAAGCCTGTGCAATTCAGATGTCCAGG...AGTGACAATAACAAGATAAATGCCTTCCATTCTCTTCGTACTTACAGGATGTAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR CCA 90 bp ATTACATCCTGTAAGTACGAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACAGTTTTGCTGCCCTCTaGGGTCTCAACTGTTACGTG +
Preference number: 4 (lower is better)
Translates to: ITSCKYEENGRHLSCYCHSFAAL*GLNCYV
Trigger: CACGTAACAGTTGAGACCCCAGAGGGCAGCAAAACT...GTGACAATAACAAGATAAATGCCTTCCATTCTCTTCGTACTTACAGGATGTAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR CCA 90 bp CCACTTTGTATCTGTGTGTCACACTTTCGCAATTCTTGCAATATTTCAAACTTCCAGTATTTGTCCTCATaGAGTAAATATCCAACAGTG +
Preference number: 4 (lower is better)
Translates to: PLCICVSHFRNSCNISNFQYLSS*SKYPTV
Trigger: CACTGTTGGATATTTACTCCATGAGGACAAATACTG...GAAGTTTGAAATATTGCAAGAATTGCGAAAGTGTGACACACAGATACAAAGTGG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CCA 90 bp TGTGTAAATATGTGGATTACATCCTGTAAGTACGAAGAGAATGGAAGGCATTTACACTGTGTAAATATGTaGATTACATCCTGTAAGTAC +
Preference number: 4 (lower is better)
Translates to: CVNMWITSCKYEENGRHLHCVNM*ITSCKY
Trigger: GTACTTACAGGATGTAATCCACATATTTACACAGTG...TAAATGCCTTCCATTCTCTTCGTACTTACAGGATGTAATCCACATATTTACACA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377836.8
ENST00000377837.5
CDS-3UTR CAA 90 bp CGCTGTAGCCCTCGCGGTAGCTGTCGCAAGGCACTGCGGGCGGAGAGCCGCGTGTGGCTCAGGCTCTGGTaGATGCGCGCGCGCCGGCGC +
Preference number: 5 (lower is better)
Translates to: RCSPRGSCRKALRAESRVWLRLW*MRARRR
Trigger: GCGCCGGCGCGCGCGCATCAACCAGAGCCTGAGCCA...CACGCGGCTCTCCGCCCGCAGTGCCTTGCGACAGCTACCGCGAGGGCTACAGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489730.1
CDS-3UTR CAA 90 bp GAGGGCGGCGAGGGCACCGGAGCGGATGCGGGCTCTGGGGCAGACGCGGGCGCTTCTTCTCCAGCCAAGTaGGGGGTGAAGCAGGGACGC +
Preference number: 5 (lower is better)
Translates to: EGGEGTGADAGSGADAGASSPAK*GVKQGR
Trigger: GCGTCCCTGCTTCACCCCCAACTTGGCTGGAGAAGA...AGCGCCCGCGTCTGCCCCAGAGCCCGCATCCGCTCCGGTGCCCTCGCCGCCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000487437.5
CDS-3UTR CAA 90 bp CACAGGCGCTGTAGCCCTCGCGGTAGCTGTCGCAAGGCACTGCGGGCGGAGAGCAGCGGCTTCAGGCTCTaGCGCAGCTCCGCCGCGTCC +
Preference number: 5 (lower is better)
Translates to: HRRCSPRGSCRKALRAESSGFRL*RSSAAS
Trigger: GGACGCGGCGGAGCTGCGCAAGAGCCTGAAGCCGCT...GCTCTCCGCCCGCAGTGCCTTGCGACAGCTACCGCGAGGGCTACAGCGCCTGTG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000489730.1
CDS-3UTR CAA 90 bp CAGGGAGGCGAGGGCGGCGAGGGCACCGGAGCGGATGCGGGCTCTGGGGCAGACTCTAGCTTCGAGCAGTaGGAGTTCTCCCGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: QGGEGGEGTGADAGSGADSSFEQ*EFSRPS
Trigger: GCTGGGCCGGGAGAACTCCAACTGCTCGAAGCTAGA...GTCTGCCCCAGAGCCCGCATCCGCTCCGGTGCCCTCGCCGCCCTCGCCTCCCTG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000489730.1
CDS-3UTR CAA 90 bp CGAGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTGGCTCAGGCTCTGGTaGATGCGCGCGCGCCGGCGC +
Preference number: 5 (lower is better)
Translates to: RAPAPGLSVCHASHKQPAWLRLW*MRARRR
Trigger: GCGCCGGCGCGCGCGCATCAACCAGAGCCTGAGCCA...AGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCTCG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CAA 90 bp CTGGTGCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCATGTGCACCCTGTGCCTaGGGGACGTGGAGGCACGCT +
Preference number: 5 (lower is better)
Translates to: LVPVLGWVCRLPTQLRGPCAPCA*GTWRHA
Trigger: AGCGTGCCTCCACGTCCCCAAGGCACAGGGTGCACA...TGGACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGCACCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp CCACGCAGCTGCGGGGTCCAGTTCCAGAACTATCTCCACCAGCTGGGATGGGGGAGCGGCTTCAGGCTCTaGCGCAGCTCCGCCGCGTCC +
Preference number: 5 (lower is better)
Translates to: PRSCGVQFQNYLHQLGWGSGFRL*RSSAAS
Trigger: GGACGCGGCGGAGCTGCGCAAGAGCCTGAAGCCGCT...CCCCCATCCCAGCTGGTGGAGATAGTTCTGGAACTGGACCCCGCAGCTGCGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CAA 90 bp CAGCCGCCACCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGTGGCTCAGGCTCTGGTaGATGCGCGCGCGCCGGCGC +
Preference number: 5 (lower is better)
Translates to: QPPPRASTCPVPQGPKQSWLRLW*MRARRR
Trigger: GCGCCGGCGCGCGCGCATCAACCAGAGCCTGAGCCA...CGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGGTGGCGGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CAA 90 bp GCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCAGTTCCTCTTCTCCAGCCAAGTaGGGGGTGAAGCAGGGACGC +
Preference number: 5 (lower is better)
Translates to: ASAGVGVSAAHAAAGSSSSSPAK*GVKQGR
Trigger: GCGTCCCTGCTTCACCCCCAACTTGGCTGGAGAAGA...GGAACTGGACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CAA 90 bp GCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCAGTTCCTTTCACAAGCCCGGCTaGGAGAGCCAGCGGAGACCT +
Preference number: 5 (lower is better)
Translates to: ASAGVGVSAAHAAAGSSSFHKPG*ESQRRP
Trigger: AGGTCTCCGCTGGCTCTCCAAGCCGGGCTTGTGAAA...GGAACTGGACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp CCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTAGCGGCTTCAGGCTCTaGCGCAGCTCCGCCGCGTCC +
Preference number: 5 (lower is better)
Translates to: PRASTCPVPQGPKQSAGSSGFRL*RSSAAS
Trigger: GGACGCGGCGGAGCTGCGCAAGAGCCTGAAGCCGCT...AGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377834.8
ENST00000487437.5
CDS-3UTR CAA 90 bp TGGGAGAGCAGTGACCAGGCAGGGTGCACGGCTGCACTTTGCCCAGGTCCTGGCGGGGCCGCCTCATTCTaGTTCTGCCCCTTCCTCACA +
Preference number: 5 (lower is better)
Translates to: WESSDQAGCTAALCPGPGGAASF*FCPFLT
Trigger: TGTGAGGAAGGGGCAGAACAAGAATGAGGCGGCCCC...GCCAGGACCTGGGCAAAGTGCAGCCGTGCACCCTGCCTGGTCACTGCTCTCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp AGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCGAAGATGGCACGGCCTaGCTGGGAGCCTCACCCTGT +
Preference number: 5 (lower is better)
Translates to: SPSPRAFSLPRQSQTAGFEDGTA*LGASPC
Trigger: ACAGGGTGAGGCTCCCAGCAAGGCCGTGCCATCTTC...GAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp TGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGCCACTGCGCCCGGCCTaGCCCACTGGTTTTATGAGA +
Preference number: 5 (lower is better)
Translates to: CHASHKQPASGLGVGTGLPLRPA*PTGFMR
Trigger: TCTCATAAAACCAGTGGGCAAGGCCGGGCGCAGTGG...CAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp AGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCGCACAGGCTGCTGATTaGGGGACTCGGGGGAGAATC +
Preference number: 5 (lower is better)
Translates to: SPSPRAFSLPRQSQTAGFAQAAD*GTRGRI
Trigger: GATTCTCCCCCGAGTCCCCAAATCAGCAGCCTGTGC...GAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp CAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCATTGGTTCTGTCTTCTaGCCCCCGGTGCTCTGGTCC +
Preference number: 5 (lower is better)
Translates to: QPQGFQSATPVTNSRLPAIGSVF*PPVLWS
Trigger: GGACCAGAGCACCGGGGGCAAGAAGACAGAACCAAT...GGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp CTGGTGCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCAAGTCACAGAACCATCTaGCAACAGCATCCCAAGACC +
Preference number: 5 (lower is better)
Translates to: LVPVLGWVCRLPTQLRGPSHRTI*QQHPKT
Trigger: GGTCTTGGGATGCTGTTGCAAGATGGTTCTGTGACT...TGGACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGCACCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp CACAAACAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGCCCCTAATGATTCTAGCTTCGAGCAGTaGGAGTTCTCCCGGCCCAGC +
Preference number: 5 (lower is better)
Translates to: HKQPASGLGVGTGLAPNDSSFEQ*EFSRPS
Trigger: GCTGGGCCGGGAGAACTCCAACTGCTCGAAGCTAGA...ATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp TGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGAGAAACTCTGCCTTCTaGCCTGGGGCCCAGAACCTT +
Preference number: 5 (lower is better)
Translates to: CHASHKQPASGLGVGTGLRNSAF*PGAQNL
Trigger: AAGGTTCTGGGCCCCAGGCAAGAAGGCAGAGTTTCT...CAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp CTGGTGCCAGTGCTGGGGTGGGTGTGTCGGCTGCCCACGCAGCTGCGGGGTCCAGCGGGGCAGAGCAATTaGTCAATGTTTATGAGGAGT +
Preference number: 5 (lower is better)
Translates to: LVPVLGWVCRLPTQLRGPAGQSN*SMFMRS
Trigger: ACTCCTCATAAACATTGACAAATTGCTCTGCCCCGC...TGGACCCCGCAGCTGCGTGGGCAGCCGACACACCCACCCCAGCACTGGCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp AGCCACCGCGCCCGGCCCATCTTAACCATATTTAAGCATCATGCACATTCACATTGGCTCAGGCTCTGGTaGATGCGCGCGCGCCGGCGC +
Preference number: 5 (lower is better)
Translates to: SHRARPILTIFKHHAHSHWLRLW*MRARRR
Trigger: GCGCCGGCGCGCGCGCATCAACCAGAGCCTGAGCCA...ATGTGAATGTGCATGATGCTTAAATATGGTTAAGATGGGCCGGGCGCGGTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR CAA 90 bp CACAAACAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGCCCCTAATGATAGCATATGCACCCTTTaGCTCTGCTCTGCTGCCCTG +
Preference number: 5 (lower is better)
Translates to: HKQPASGLGVGTGLAPNDSICTL*LCSAAL
Trigger: CAGGGCAGCAGAGCAGAGCAAAAGGGTGCATATGCT...ATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTGTTTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp CTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTGTGGATCGGCCGAGTCTCCCCGTGACTGCTaGAGTTGTAGCTTGATTGGA +
Preference number: 5 (lower is better)
Translates to: LSSAPRSQAVGRVCGSAESPRDC*SCSLIG
Trigger: TCCAATCAAGCTACAACTCAAGCAGTCACGGGGAGA...CTCGGCCGATCCACAGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp CGAGCCCCAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTCTGTGGAGGAGGATGTaGGCGTTCCTATTTCACAAG +
Preference number: 5 (lower is better)
Translates to: RAPAPGLSVCHASHKQPALWRRM*AFLFHK
Trigger: CTTGTGAAATAGGAACGCCAACATCCTCCTCCACAG...AGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTGGGGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp TCATATCCTGCCACCCAAACCAGTGCCAAGGTCATCATGGGCTTGTGTGGCACAAAGCCACAAGCTTCCTaGAGGCCACGGGGCCGCCTC +
Preference number: 5 (lower is better)
Translates to: SYPATQTSAKVIMGLCGTKPQAS*RPRGRL
Trigger: GAGGCGGCCCCGTGGCCTCAAGGAAGCTTGTGGCTT...TGTGCCACACAAGCCCATGATGACCTTGGCACTGGTTTGGGTGGCAGGATATGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp TTATCTTGTTATTGTCACTGGGGCAGATCCGGAGTCAGCTCTGGGCGGAGATGGAAGCCCCTGGGCACCTaGCCCCAGTCGCACGAGTGT +
Preference number: 5 (lower is better)
Translates to: LSCYCHWGRSGVSSGRRWKPLGT*PQSHEC
Trigger: ACACTCGTGCGACTGGGGCAAGGTGCCCAGGGGCTT...CCATCTCCGCCCAGAGCTGACTCCGGATCTGCCCCAGTGACAATAACAAGATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS TCA 90 bp TCGCCGGCGCCTGGAACCGCAGTTAGCGGGCACTGGGCAGATGAATaGATTTGTCTGTGCCTGGACGGCTCTCCAATTCGAACCCAGTTT +
Preference number: 5 (lower is better)
Translates to: SPAPGTAVSGHWADE*ICLCLDGSPIRTQF
Trigger: AAACTGGGTTCGAATTGGAGAGCCGTCCAGGCACAGACAAATTCATTCATCTGCCCAGTGCCCGCTAACTGCGGTTCCAGGCGCCGGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR CAA 90 bp CAGCCCCAGGGCTTTCAGTCTGCCACGCCAGTCACAAACAGCCGGCTTCCGGCCTGCCCAGGTGTGAAATaGATGCTCGGGAAAACAAAT +
Preference number: 5 (lower is better)
Translates to: QPQGFQSATPVTNSRLPACPGVK*MLGKTN
Trigger: ATTTGTTTTCCCGAGCATCAATTTCACACCTGGGCA...GGCCGGAAGCCGGCTGTTTGTGACTGGCGTGGCAGACTGAAAGCCCTGGGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp CAGGTGTATGGTCTGCGGCCATTGACTCAAGCACAGGGAATGAGAACTTCTGGAGTGGCAGCTCTGGAATaGCGTCGCCGGCGCCTGGAA +
Preference number: 5 (lower is better)
Translates to: QVYGLRPLTQAQGMRTSGVAALE*RRRRLE
Trigger: TTCCAGGCGCCGGCGACGCAATTCCAGAGCTGCCAC...TCCAGAAGTTCTCATTCCCTGTGCTTGAGTCAATGGCCGCAGACCATACACCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS CCA 90 bp CCGCAGTTAGCGGGCACTGGGCAGATGAATGAATTTGTCTGTGCCTaGACGGCTCTCCAATTCGAACCCAGTTTTGCTGCCCTCTGGGGT +
Preference number: 5 (lower is better)
Translates to: PQLAGTGQMNEFVCA*TALQFEPSFAALWG
Trigger: ACCCCAGAGGGCAGCAAAACTGGGTTCGAATTGGAGAGCCGTCCAGGCACAGACAAATTCATTCATCTGCCCAGTGCCCGCTAACTGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR CAA 90 bp CCTGTAAGTACGAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTGGGGCATGGCTCAGGCTCTGGTaGATGCGCGCGCGCCGGCGC +
Preference number: 5 (lower is better)
Translates to: PVSTKRMEGIYLVIVTGAWLRLW*MRARRR
Trigger: GCGCCGGCGCGCGCGCATCAACCAGAGCCTGAGCCA...TGCCCCAGTGACAATAACAAGATAAATGCCTTCCATTCTCTTCGTACTTACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377836.8
ENST00000377837.5
CDS-3UTR CAA 90 bp TCCTCCAAAGCCACAAGCTTCCTTGAGGCCACGGGGCCGCCTCATTCTTGTTCTTATGAGGAGTCCTCCTaGGCAGCCCAGTCTTTATCC +
Preference number: 5 (lower is better)
Translates to: SSKATSFLEATGPPHSCSYEESS*AAQSLS
Trigger: GGATAAAGACTGGGCTGCCAAGGAGGACTCCTCATA...AGAACAAGAATGAGGCGGCCCCGTGGCCTCAAGGAAGCTTGTGGCTTTGGAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS CCA 90 bp TGTGCCTGGACGGCTCTCCAATTCGAACCCAGTTTTGCTGCCCTCTaGGGTCTCAACTGTTACGTGAGGCAAATTAGGAGAGAAGCCCCT +
Preference number: 5 (lower is better)
Translates to: CAWTALQFEPSFAAL*GLNCYVRQIRREAP
Trigger: AGGGGCTTCTCTCCTAATTTGCCTCACGTAACAGTTGAGACCCCAGAGGGCAGCAAAACTGGGTTCGAATTGGAGAGCCGTCCAGGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS-3UTR CAA 90 bp AAGTACGAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTGGGGCAGATCCAGCGGCTTCAGGCTCTaGCGCAGCTCCGCCGCGTCC +
Preference number: 5 (lower is better)
Translates to: KYEENGRHLSCYCHWGRSSGFRL*RSSAAS
Trigger: GGACGCGGCGGAGCTGCGCAAGAGCCTGAAGCCGCT...GGATCTGCCCCAGTGACAATAACAAGATAAATGCCTTCCATTCTCTTCGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377836.8
ENST00000377837.5
CDS-3UTR CAA 90 bp CAGCCGGCTTCCGGCCTGGGTGTGGGTACTGGGCTGGCCCCTAATGATGGGAACAAAAATCTTAACAAGTaGCTTCCAGTAACCAGTCTC +
Preference number: 5 (lower is better)
Translates to: QPASGLGVGTGLAPNDGNKNLNK*LPVTSL
Trigger: GAGACTGGTTACTGGAAGCAACTTGTTAAGATTTTT...GTTCCCATCATTAGGGGCCAGCCCAGTACCCACACCCAGGCCGGAAGCCGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp CCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTACACCTCCCCAGTATTaGTCCTCATGGAGTAAATAT +
Preference number: 5 (lower is better)
Translates to: PRASTCPVPQGPKQSAGSTPPQY*SSWSKY
Trigger: ATATTTACTCCATGAGGACAAATACTGGGGAGGTGT...AGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp CCAAGAGCTTCAACCTGTCCAGTGCCCCAAGGTCCCAAGCAGTCGGCAGGGTCTTTGCAGTTCACTTTATaGCACGTCAAGATATTGCCT +
Preference number: 5 (lower is better)
Translates to: PRASTCPVPQGPKQSAGSLQFTL*HVKILP
Trigger: AGGCAATATCTTGACGTGCAATAAAGTGAACTGCAA...AGACCCTGCCGACTGCTTGGGACCTTGGGGCACTGGACAGGTTGAAGCTCTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp ATGAAACACTGTGTAAATATGTGGATTACATCCTGTAAGTACGAAGAGAATGGAAGCGGCTTCAGGCTCTaGCGCAGCTCCGCCGCGTCC +
Preference number: 5 (lower is better)
Translates to: MKHCVNMWITSCKYEENGSGFRL*RSSAAS
Trigger: GGACGCGGCGGAGCTGCGCAAGAGCCTGAAGCCGCT...TCCATTCTCTTCGTACTTACAGGATGTAATCCACATATTTACACAGTGTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377836.8
ENST00000377837.5
CDS-3UTR CAA 90 bp CTTCCTTCATATCCTGCCACCCAAACCAGTGCCAAGGTCATCATGGGCTTGTGTTGCTTGAGTTGTAGCTaGATTGGAGCCAGGTCAATG +
Preference number: 5 (lower is better)
Translates to: LPSYPATQTSAKVIMGLCCLSCS*IGARSM
Trigger: CATTGACCTGGCTCCAATCAAGCTACAACTCAAGCA...ACACAAGCCCATGATGACCTTGGCACTGGTTTGGGTGGCAGGATATGAAGGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp ACGAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTGGGGCAGATCCGGAGGCATTTATCTTGTTATaGTCACTGGGGCAGATCCGG +
Preference number: 5 (lower is better)
Translates to: TKRMEGIYLVIVTGADPEAFILL*SLGQIR
Trigger: CCGGATCTGCCCCAGTGACAATAACAAGATAAATGC...CTCCGGATCTGCCCCAGTGACAATAACAAGATAAATGCCTTCCATTCTCTTCGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377836.8
ENST00000377837.5
CDS-3UTR CAA 90 bp TGTAAGTACGAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTGGGGCAGAGCATTTATCTTGTTATaGTCACTGGGGCAGATCCGG +
Preference number: 5 (lower is better)
Translates to: CKYEENGRHLSCYCHWGRAFILL*SLGQIR
Trigger: CCGGATCTGCCCCAGTGACAATAACAAGATAAATGC...TCTGCCCCAGTGACAATAACAAGATAAATGCCTTCCATTCTCTTCGTACTTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377836.8
ENST00000377837.5
CDS-3UTR CAA 90 bp CCACTTTGTATCTGTGTGTCACACTTTCGCAATTCTTGCAATATTTCAAACTTCAAGGTCATCATGGGCTaGTGTGGCACAGTCAGATTT +
Preference number: 5 (lower is better)
Translates to: PLCICVSHFRNSCNISNFKVIMG*CGTVRF
Trigger: AAATCTGACTGTGCCACACAAGCCCATGATGACCTT...GAAGTTTGAAATATTGCAAGAATTGCGAAAGTGTGACACACAGATACAAAGTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377834.8
CDS-3UTR CAA 90 bp TTACATCCTGTAAGTACGAAGAGAATGGAAGGCATTTATCTTGTTATTGTCACTTTAGAGCAGATTAACTaGCTCTCAGGTGTATGGTCT +
Preference number: 5 (lower is better)
Translates to: LHPVSTKRMEGIYLVIVTLEQIN*LSGVWS
Trigger: AGACCATACACCTGAGAGCAAGTTAATCTGCTCTAA...AGTGACAATAACAAGATAAATGCCTTCCATTCTCTTCGTACTTACAGGATGTAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS TCA 72 bp AGGGGAAGCCAGGTGTGCCAGCCAGAAGCATCCTCCTaGCTCAGGCTCCCCCGAGTGCCTGACCCTGTGAGT +
Preference number: 6 (lower is better)
Translates to: RGSQVCQPEASS*LRLPRVPDPVS
Trigger: ACTCACAGGGTCAGGCACTCGGGGGAGCCTGAGTCAGGAGGATGCTTCTGGCTGGCACACCTGGCTTCCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000471190.1
CDS TCA 72 bp CAGCTCTGGGCGGAGATGGATTTACCCTGGAGCTGCTaGAGCTTAAGCTGGGGGCTGCTCAGGAGCCTGGAT +
Preference number: 6 (lower is better)
Translates to: QLWAEMDLPWSC*SLSWGLLRSLD
Trigger: ATCCAGGCTCCTGAGCAGCCCCCAGCTTAAGCTTCAGCAGCTCCAGGGTAAATCCATCTCCGCCCAGAGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377836.8
ENST00000377837.5
ENST00000471190.1
CDS GCA 72 bp CTGTGCCTGGACGGCTCTCCAATTCGAACCCAGTTTTaGTGCCCTCTGGGGTCTCAACTGTTACGTGAGGCA +
Preference number: 6 (lower is better)
Translates to: LCLDGSPIRTQF*CPLGSQLLREA
Trigger: TGCCTCACGTAACAGTTGAGACCCCAGAGGGCAGCAAAACTGGGTTCGAATTGGAGAGCCGTCCAGGCACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS TCA 72 bp CCTGGAACCGCAGTTAGCGGGCACTGGGCAGATGAATaGATTTGTCTGTGCCTGGACGGCTCTCCAATTCGA +
Preference number: 6 (lower is better)
Translates to: PGTAVSGHWADE*ICLCLDGSPIR
Trigger: TCGAATTGGAGAGCCGTCCAGGCACAGACAAATTCATTCATCTGCCCAGTGCCCGCTAACTGCGGTTCCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS CCA 72 bp GCGGGCACTGGGCAGATGAATGAATTTGTCTGTGCCTaGACGGCTCTCCAATTCGAACCCAGTTTTGCTGCC +
Preference number: 6 (lower is better)
Translates to: AGTGQMNEFVCA*TALQFEPSFAA
Trigger: GGCAGCAAAACTGGGTTCGAATTGGAGAGCCGTCCAGGCACAGACAAATTCATTCATCTGCCCAGTGCCCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS GCA 72 bp TGCCTGGACGGCTCTCCAATTCGAACCCAGTTTTGCTaGCCTCTGGGGTCTCAACTGTTACGTGAGGCAAAT +
Preference number: 6 (lower is better)
Translates to: CLDGSPIRTQFC*PLGSQLLREAN
Trigger: ATTTGCCTCACGTAACAGTTGAGACCCCAGAGGGCAGCAAAACTGGGTTCGAATTGGAGAGCCGTCCAGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377837.5
CDS CCA 72 bp ACGGCTCTCCAATTCGAACCCAGTTTTGCTGCCCTCTaGGGTCTCAACTGTTACGTGAGGCAAATTAGGAGA +
Preference number: 6 (lower is better)
Translates to: TALQFEPSFAAL*GLNCYVRQIRR
Trigger: TCTCCTAATTTGCCTCACGTAACAGTTGAGACCCCAGAGGGCAGCAAAACTGGGTTCGAATTGGAGAGCCGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377837.5