Pregenerated sensors for HES1 (Homo sapiens)
Ensembl gene IDs: ENSG00000114315Ensembl transcript IDs: ENST00000232424.4, ENST00000476918.1
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | TCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTGGGGAGTTTAGGAGCCGCCTCTCCAGCCTaGCTGCCCAGCTTGCAGGGG | + |
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Preference number: 4 (lower is better) Translates to: SSSCLESGGKRGGLGSLGAASPA*LPSLQG Trigger: CCCCTGCAAGCTGGGCAGCCAGGCTGGAGAGGCGGC...TCCTAAACTCCCCAACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR TCA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTGGAGGAGGGGTGGCCTaGGCCCCCTCAGTTCCGCCA | + |
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Preference number: 4 (lower is better) Translates to: SLPVFKFLFRVRREERWVGGGVA*APSVPP Trigger: TGGCGGAACTGAGGGGGCTCAGGCCACCCCTCCTCC...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR GCA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTAGCGCAGCCGTCATCTaGGCCCGCTGCAGGTTCCGG | + |
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Preference number: 4 (lower is better) Translates to: SLPVFKFLFRVRREERWVSAAVI*ARCRFR Trigger: CCGGAACCTGCAGCGGGCGCAGATGACGGCTGCGCT...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR TCA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTTGGTGTAGACGGGGATaGCAGGGCCGCTGTGCGCGA | + |
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Preference number: 4 (lower is better) Translates to: SLPVFKFLFRVRREERWVWCRRG*QGRCAR Trigger: TCGCGCACAGCGGCCCTGTCATCCCCGTCTACACCA...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR GCA 90 bp | TCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTGGGGAGTTTAGGAGTCATCTGCGCCCGCTaGAGGTTCCGGAGGTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: SSSCLESGGKRGGLGSLGVICAR*RFRRCF Trigger: GAAGCACCTCCGGAACCTGCAGCGGGCGCAGATGAC...TCCTAAACTCCCCAACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR GCA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTATGACAGGGCCGCTGTaGGCGAAGGCCCCGTTGGGA | + |
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Preference number: 4 (lower is better) Translates to: SLPVFKFLFRVRREERWVMTGPL*AKAPLG Trigger: TCCCAACGGGGCCTTCGCGCACAGCGGCCCTGTCAT...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CCA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTAAGGTGACACTGCGTTaGGGCCCACGGAGGTGCCGC | + |
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Preference number: 4 (lower is better) Translates to: SLPVFKFLFRVRREERWVKVTLR*GPRRCR Trigger: GCGGCACCTCCGTGGGCCCCAACGCAGTGTCACCTT...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CCA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTCGTGTTGACACTGGCTaGGGTAGCAGCCACCGGGGA | + |
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Preference number: 4 (lower is better) Translates to: SLPVFKFLFRVRREERWVRVDTG*GSSHRG Trigger: TCCCCGGTGGCTGCTACCCCAGCCAGTGTCAACACG...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CCA 90 bp | TCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTGGGGAGTTTAGGACTTCCCCAGCACACTTaGGTCTGTGCTCAGCGCAGC | + |
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Preference number: 4 (lower is better) Translates to: SSSCLESGGKRGGLGSLGLPQHT*VCAQRS Trigger: GCTGCGCTGAGCACAGACCCAAGTGTGCTGGGGAAG...TCCTAAACTCCCCAACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CCA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTTCTGGGTCATGCAGTTaGCCAGGTGGCCGAGCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SLPVFKFLFRVRREERWVSGSCS*PGGRAA Trigger: GGCTGCTCGGCCACCTGGCCAACTGCATGACCCAGA...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR TCA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTCGTTCATGCACTCGCTaGAGCCGGCTCGGTACTTCC | + |
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Preference number: 4 (lower is better) Translates to: SLPVFKFLFRVRREERWVRSCTR*SRLGTS Trigger: GGAAGTACCGAGCCGGCTTCAGCGAGTGCATGAACG...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CCA 90 bp | TCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTGGGGAGTTTAGGACGGAGGGAAGAGAGGTaGGTTGGGGAGTTTAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SSSCLESGGKRGGLGSLGRREER*VGEFRR Trigger: CCTCCTAAACTCCCCAACCCACCTCTCTTCCCTCCG...TCCTAAACTCCCCAACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CCA 90 bp | TCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTGGGGAGTTTAGGAGGAGCCGGTACCACCTaGAAGCCTCCAAACACCTTA | + |
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Preference number: 4 (lower is better) Translates to: SSSCLESGGKRGGLGSLGGAGTT*KPPNTL Trigger: TAAGGTGTTTGGAGGCTTCCAGGTGGTACCGGCTCC...TCCTAAACTCCCCAACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CCA 90 bp | TCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTGGGGAGTTTAGGAGTCATGGCATTGATCTaGGTCATGCAGTTGGCCAGG | + |
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Preference number: 4 (lower is better) Translates to: SSSCLESGGKRGGLGSLGVMALI*VMQLAR Trigger: CCTGGCCAACTGCATGACCCAGATCAATGCCATGAC...TCCTAAACTCCCCAACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CCA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTATGAGGAAAGCAAACTaGCCATCGGGAGCCGGTACC | + |
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Preference number: 4 (lower is better) Translates to: SLPVFKFLFRVRREERWVMRKAN*PSGAGT Trigger: GGTACCGGCTCCCGATGGCCAGTTTGCTTTCCTCAT...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR TCA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTGGTAGGTCATGGCATTaGTCTGGGTCATGCAGTTGG | + |
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Preference number: 4 (lower is better) Translates to: SLPVFKFLFRVRREERWVGRSWH*SGSCSW Trigger: CCAACTGCATGACCCAGATCAATGCCATGACCTACC...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR TCA 90 bp | ATAGTGCATGGTCAGTCACTTAATACAGCTCTCTCTACAAAAAGTAACTTCTTAGGGGCCGCTGGAAGGTaGCACTGCGTTGGGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: IVHGQSLNTALSTKSNFLGAAGR*HCVGAH Trigger: GTGGGCCCCAACGCAGTGTCACCTTCCAGCGGCCCC...TAAGAAGTTACTTTTTGTAGAGAGAGCTGTATTAAGTGACTGACCATGCACTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR GCA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTTGCAGGTTCCGGAGGTaGTTCACTGTCATTTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: SLPVFKFLFRVRREERWVCRFRR*FTVISR Trigger: TCTGGAAATGACAGTGAAGCACCTCCGGAACCTGCA...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR GCA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTTTCTCCAGCTTGGAATaGCGCGAGCTATCTTTCTTC | + |
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Preference number: 4 (lower is better) Translates to: SLPVFKFLFRVRREERWVFSSLE*RELSFF Trigger: GAAGAAAGATAGCTCGCGGCATTCCAAGCTGGAGAA...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR GCA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTCTTTCTGTGCTCAGATaGTGTCTTTGGTTTATCCGG | + |
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Preference number: 4 (lower is better) Translates to: SLPVFKFLFRVRREERWVLSVLR*CLWFIR Trigger: CCGGATAAACCAAAGACAGCATCTGAGCACAGAAAG...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CCA 90 bp | ATAGTGCATGGTCAGTCACTTAATACAGCTCTCTCTACAAAAAGTAACTTCTTAATGCAGTTGGCCAGGTaGCCGAGCAGCCGAGTGCGC | + |
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Preference number: 4 (lower is better) Translates to: IVHGQSLNTALSTKSNFLMQLAR*PSSRVR Trigger: GCGCACTCGGCTGCTCGGCCACCTGGCCAACTGCAT...TAAGAAGTTACTTTTTGTAGAGAGAGCTGTATTAAGTGACTGACCATGCACTAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR TCA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTCTTTCACAAAACTACTaGGCAAGTGCTGAGGGTTTA | + |
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Preference number: 4 (lower is better) Translates to: SLPVFKFLFRVRREERWVLSQNY*ASAEGL Trigger: TAAACCCTCAGCACTTGCTCAGTAGTTTTGTGAAAG...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR GCA 90 bp | ATAGTGCATGGTCAGTCACTTAATACAGCTCTCTCTACAAAAAGTAACTTCTTATGGGGCCCACGGAGGTaGCGCTGTTGCTGGTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: IVHGQSLNTALSTKSNFLWGPRR*RCCWCR Trigger: TCTACACCAGCAACAGCGGCACCTCCGTGGGCCCCA...TAAGAAGTTACTTTTTGTAGAGAGAGCTGTATTAAGTGACTGACCATGCACTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR GCA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTTTTGATGACTTTCTGTaGTCAGATGCTGTCTTTGGT | + |
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Preference number: 4 (lower is better) Translates to: SLPVFKFLFRVRREERWVFDDFL*SDAVFG Trigger: ACCAAAGACAGCATCTGAGCACAGAAAGTCATCAAA...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR GCA 90 bp | ATAGTGCATGGTCAGTCACTTAATACAGCTCTCTCTACAAAAAGTAACTTCTTAGCACACTTGGGTCTGTaGTCAGCGCAGCCGTCATCT | + |
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Preference number: 4 (lower is better) Translates to: IVHGQSLNTALSTKSNFLAHLGL*SAQPSS Trigger: AGATGACGGCTGCGCTGAGCACAGACCCAAGTGTGC...TAAGAAGTTACTTTTTGTAGAGAGAGCTGTATTAAGTGACTGACCATGCACTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR TCA 90 bp | ATAGTGCATGGTCAGTCACTTAATACAGCTCTCTCTACAAAAAGTAACTTCTTAAGGCCCCGTTGGGAATaGGGAAAGCAAACTGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: IVHGQSLNTALSTKSNFLRPRWE*GKQTGH Trigger: ATGGCCAGTTTGCTTTCCTCATTCCCAACGGGGCCT...TAAGAAGTTACTTTTTGTAGAGAGAGCTGTATTAAGTGACTGACCATGCACTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CCA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTATCAGTGTTTTCAGCTaGCTCAGACTTTCATTTATT | + |
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Preference number: 4 (lower is better) Translates to: SLPVFKFLFRVRREERWVISVFS*LRLSFI Trigger: AATAAATGAAAGTCTGAGCCAGCTGAAAACACTGAT...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR TCA 90 bp | ATAGTGCATGGTCAGTCACTTAATACAGCTCTCTCTACAAAAAGTAACTTCTTATTTGTGGCTACTTGGTaGTCAGTAGCGCTGTTCCAG | + |
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Preference number: 4 (lower is better) Translates to: IVHGQSLNTALSTKSNFLFVATW*SVALFQ Trigger: CTGGAACAGCGCTACTGATCACCAAGTAGCCACAAA...TAAGAAGTTACTTTTTGTAGAGAGAGCTGTATTAAGTGACTGACCATGCACTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CCA 90 bp | ATAGTGCATGGTCAGTCACTTAATACAGCTCTCTCTACAAAAAGTAACTTCTTACTCAGATGCTGTCTTTaGTTTATCCGGTGTCGTGTT | + |
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Preference number: 4 (lower is better) Translates to: IVHGQSLNTALSTKSNFLLRCCL*FIRCRV Trigger: AACACGACACCGGATAAACCAAAGACAGCATCTGAG...TAAGAAGTTACTTTTTGTAGAGAGAGCTGTATTAAGTGACTGACCATGCACTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR TCA 90 bp | ATAGTGCATGGTCAGTCACTTAATACAGCTCTCTCTACAAAAAGTAACTTCTTACTACTGAGCAAGTGCTaGGGGTTTATTATATTTTGT | + |
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Preference number: 4 (lower is better) Translates to: IVHGQSLNTALSTKSNFLLLSKC*GFIIFC Trigger: ACAAAATATAATAAACCCTCAGCACTTGCTCAGTAG...TAAGAAGTTACTTTTTGTAGAGAGAGCTGTATTAAGTGACTGACCATGCACTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CCA 90 bp | ATAGTGCATGGTCAGTCACTTAATACAGCTCTCTCTACAAAAAGTAACTTCTTACCTTTTTACATATTCTaGAAGAATCAGTTCGAAGAC | + |
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Preference number: 4 (lower is better) Translates to: IVHGQSLNTALSTKSNFLPFYIF*KNQFED Trigger: GTCTTCGAACTGATTCTTCCAGAATATGTAAAAAGG...TAAGAAGTTACTTTTTGTAGAGAGAGCTGTATTAAGTGACTGACCATGCACTAT 34% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS CCA 90 bp | TGCTGGGGGTCCCTCCTCCCGGCCACGGAGCGCAAGCATTATCTCTaGACCCCAGCGAATAAGGCCGGGCCCTCCCGCCTGGGAGAACGC | + |
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Preference number: 5 (lower is better) Translates to: CWGSLLPATERKHYL*TPANKAGPSRLGER Trigger: GCGTTCTCCCAGGCGGGAGGGCCCGGCCTTATTCGCTGGGGTCCAGAGATAATGCTTGCGCTCCGTGGCCGGGAGGAGGGACCCCCAGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000476918.1 |
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| CDS TCA 90 bp | CGGCCTCCACATGGAGTCCGCCGTAAGCGAGGGGCCGCTGGAAGGTaGCACTGCGTTGGGGCCCACGGAGGTGCCGCTGTTGCTGGTGTA | + |
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Preference number: 5 (lower is better) Translates to: RPPHGVRRKRGAAGR*HCVGAHGGAAVAGV Trigger: TACACCAGCAACAGCGGCACCTCCGTGGGCCCCAACGCAGTGTCACCTTCCAGCGGCCCCTCGCTTACGGCGGACTCCATGTGGAGGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS CCA 90 bp | AGCATTATCTCTGGACCCCAGCGAATAAGGCCGGGCCCTCCCGCCTaGGAGAACGCAGTACCAGCGAGTGCCAGACCCCGCAGGGCGGGG | + |
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Preference number: 5 (lower is better) Translates to: SIISGPQRIRPGPPA*ENAVPASARPRRAG Trigger: CCCCGCCCTGCGGGGTCTGGCACTCGCTGGTACTGCGTTCTCCCAGGCGGGAGGGCCCGGCCTTATTCGCTGGGGTCCAGAGATAATGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476918.1 |
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| CDS CCA 90 bp | TTGGGAATGAGGAAAGCAAACTGGCCATCGGGAGCCGGTACCACCTaGAAGCCTCCAAACACCTTAGCCGCCTCTCCAGCCTGGCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: LGMRKANWPSGAGTT*KPPNTLAASPAWLP Trigger: GGGCAGCCAGGCTGGAGAGGCGGCTAAGGTGTTTGGAGGCTTCCAGGTGGTACCGGCTCCCGATGGCCAGTTTGCTTTCCTCATTCCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS CCA 90 bp | AGGCAAGAAAGGAAAGTGAGCCCCGTGTCAGCTGCTTCAGAGTGCTaGGGGTCCCTCCTCCCGGCCACGGAGCGCAAGCATTATCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: RQERKVSPVSAASEC*GSLLPATERKHYLW Trigger: CCAGAGATAATGCTTGCGCTCCGTGGCCGGGAGGAGGGACCCCCAGCACTCTGAAGCAGCTGACACGGGGCTCACTTTCCTTTCTTGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476918.1 |
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| CDS GCA 90 bp | AGTAGGCAAGAAAGGAAAGTGAGCCCCGTGTCAGCTGCTTCAGAGTaGTGGGGGTCCCTCCTCCCGGCCACGGAGCGCAAGCATTATCTC | + |
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Preference number: 5 (lower is better) Translates to: SRQERKVSPVSAASE*WGSLLPATERKHYL Trigger: GAGATAATGCTTGCGCTCCGTGGCCGGGAGGAGGGACCCCCAGCACTCTGAAGCAGCTGACACGGGGCTCACTTTCCTTTCTTGCCTACT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000476918.1 |
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| CDS-3UTR CAA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTATCTGGGTCATGCAGTaGGCCAGGTGGCCGAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: SLPVFKFLFRVRREERWVIWVMQ*ARWPSS Trigger: GCTGCTCGGCCACCTGGCCAACTGCATGACCCAGAT...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CAA 90 bp | TCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTGGGGAGTTTAGGAGGGAAGAGAGGTGGGTaGGGGAGTTTAGGAGGAGGG | + |
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Preference number: 5 (lower is better) Translates to: SSSCLESGGKRGGLGSLGGKRGG*GSLGGG Trigger: CCCTCCTCCTAAACTCCCCAACCCACCTCTCTTCCC...TCCTAAACTCCCCAACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CAA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTACTTCCCCAGCACACTaGGGTCTGTGCTCAGCGCAG | + |
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Preference number: 5 (lower is better) Translates to: SLPVFKFLFRVRREERWVTSPAH*GLCSAQ Trigger: CTGCGCTGAGCACAGACCCAAGTGTGCTGGGGAAGT...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CAA 90 bp | TCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTGGGGAGTTTAGGATGCGCGAAGGCCCCGTaGGGAATGAGGAAAGCAAAC | + |
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Preference number: 5 (lower is better) Translates to: SSSCLESGGKRGGLGSLGCAKAP*GMRKAN Trigger: GTTTGCTTTCCTCATTCCCAACGGGGCCTTCGCGCA...TCCTAAACTCCCCAACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CAA 90 bp | TCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTGGGGAGTTTAGGATTATCCGGTGTCGTGTaGACACTGGCTGGGGTAGCA | + |
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Preference number: 5 (lower is better) Translates to: SSSCLESGGKRGGLGSLGLSGVV*TLAGVA Trigger: TGCTACCCCAGCCAGTGTCAACACGACACCGGATAA...TCCTAAACTCCCCAACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS CCA 90 bp | CTCAGATGCTGTCTTTGGTTTATCCGGTGTCGTGTTGACACTGGCTaGGGTAGCAGCCACCGGGGACGAGGAATTTTTCTCCATTATATC | + |
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Preference number: 5 (lower is better) Translates to: LRCCLWFIRCRVDTG*GSSHRGRGIFLHYI Trigger: GATATAATGGAGAAAAATTCCTCGTCCCCGGTGGCTGCTACCCCAGCCAGTGTCAACACGACACCGGATAAACCAAAGACAGCATCTGAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000232424.4 ENST00000476918.1 |
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| CDS-3UTR CAA 90 bp | TCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTGGGGAGTTTAGGAGCTCAGATGCTGTCTTaGGTTTATCCGGTGTCGTGT | + |
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Preference number: 5 (lower is better) Translates to: SSSCLESGGKRGGLGSLGAQMLS*VYPVSC Trigger: ACACGACACCGGATAAACCAAAGACAGCATCTGAGC...TCCTAAACTCCCCAACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CAA 90 bp | ATAGTGCATGGTCAGTCACTTAATACAGCTCTCTCTACAAAAAGTAACTTCTTAGAAGGTGACACTGCGTaGGGGCCCACGGAGGTGCCG | + |
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Preference number: 5 (lower is better) Translates to: IVHGQSLNTALSTKSNFLEGDTA*GPTEVP Trigger: CGGCACCTCCGTGGGCCCCAACGCAGTGTCACCTTC...TAAGAAGTTACTTTTTGTAGAGAGAGCTGTATTAAGTGACTGACCATGCACTAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CAA 90 bp | TCTCTCCCAGTATTCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTATATTTTGTGGCTACTaGGTGATCAGTAGCGCTGTT | + |
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Preference number: 5 (lower is better) Translates to: SLPVFKFLFRVRREERWVIFCGY*VISSAV Trigger: AACAGCGCTACTGATCACCAAGTAGCCACAAAATAT...AACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGAATACTGGGAGAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS-3UTR CAA 90 bp | TCAAGTTCCTGTTTAGAGTCCGGAGGGAAGAGAGGTGGGTTGGGGAGTTTAGGAAGGGTTTATTATATTTaGTGGCTACTTGGTGATCAG | + |
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Preference number: 5 (lower is better) Translates to: SSSCLESGGKRGGLGSLGRVYYI*WLLGDQ Trigger: CTGATCACCAAGTAGCCACAAAATATAATAAACCCT...TCCTAAACTCCCCAACCCACCTCTCTTCCCTCCGGACTCTAAACAGGAACTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS CCA 72 bp | TCTGGACCCCAGCGAATAAGGCCGGGCCCTCCCGCCTaGGAGAACGCAGTACCAGCGAGTGCCAGACCCCGC | + |
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Preference number: 6 (lower is better) Translates to: SGPQRIRPGPPA*ENAVPASARPR Trigger: GCGGGGTCTGGCACTCGCTGGTACTGCGTTCTCCCAGGCGGGAGGGCCCGGCCTTATTCGCTGGGGTCCAGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476918.1 |
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| CDS TCA 72 bp | CCACGGAGGTGCCGCTGTTGCTGGTGTAGACGGGGATaGCAGGGCCGCTGTGCGCGAAGGCCCCGTTGGGAA | + |
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Preference number: 6 (lower is better) Translates to: PRRCRCCWCRRG*QGRCARRPRWE Trigger: TTCCCAACGGGGCCTTCGCGCACAGCGGCCCTGTCATCCCCGTCTACACCAGCAACAGCGGCACCTCCGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS TCA 72 bp | CATGGAGTCCGCCGTAAGCGAGGGGCCGCTGGAAGGTaGCACTGCGTTGGGGCCCACGGAGGTGCCGCTGTT | + |
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Preference number: 6 (lower is better) Translates to: HGVRRKRGAAGR*HCVGAHGGAAV Trigger: AACAGCGGCACCTCCGTGGGCCCCAACGCAGTGTCACCTTCCAGCGGCCCCTCGCTTACGGCGGACTCCATG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS CCA 72 bp | TCCCTCCTCCCGGCCACGGAGCGCAAGCATTATCTCTaGACCCCAGCGAATAAGGCCGGGCCCTCCCGCCTG | + |
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Preference number: 6 (lower is better) Translates to: SLLPATERKHYL*TPANKAGPSRL Trigger: CAGGCGGGAGGGCCCGGCCTTATTCGCTGGGGTCCAGAGATAATGCTTGCGCTCCGTGGCCGGGAGGAGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000476918.1 |
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| CDS CCA 72 bp | CTCGCTGAAGCCGGCTCGGTACTTCCCCAGCACACTTaGGTCTGTGCTCAGCGCAGCCGTCATCTGCGCCCG | + |
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Preference number: 6 (lower is better) Translates to: LAEAGSVLPQHT*VCAQRSRHLRP Trigger: CGGGCGCAGATGACGGCTGCGCTGAGCACAGACCCAAGTGTGCTGGGGAAGTACCGAGCCGGCTTCAGCGAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS GCA 72 bp | GAAAGGAAAGTGAGCCCCGTGTCAGCTGCTTCAGAGTaGTGGGGGTCCCTCCTCCCGGCCACGGAGCGCAAG | + |
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Preference number: 6 (lower is better) Translates to: ERKVSPVSAASE*WGSLLPATERK Trigger: CTTGCGCTCCGTGGCCGGGAGGAGGGACCCCCAGCACTCTGAAGCAGCTGACACGGGGCTCACTTTCCTTTC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000476918.1 |
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| CDS CCA 72 bp | AGGAAAGTGAGCCCCGTGTCAGCTGCTTCAGAGTGCTaGGGGTCCCTCCTCCCGGCCACGGAGCGCAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: RKVSPVSAASEC*GSLLPATERKH Trigger: ATGCTTGCGCTCCGTGGCCGGGAGGAGGGACCCCCAGCACTCTGAAGCAGCTGACACGGGGCTCACTTTCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000476918.1 |
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| CDS CAA 72 bp | ACGGGGATGACAGGGCCGCTGTGCGCGAAGGCCCCGTaGGGAATGAGGAAAGCAAACTGGCCATCGGGAGCC | + |
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Preference number: 6 (lower is better) Translates to: TGMTGPLCAKAP*GMRKANWPSGA Trigger: GGCTCCCGATGGCCAGTTTGCTTTCCTCATTCCCAACGGGGCCTTCGCGCACAGCGGCCCTGTCATCCCCGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS CCA 72 bp | GTAGCTGAATGCCTCTCACAACCACGGGCGGAAGTCTaGAAGAAATCACCGCGAGGCGAGCGGGACGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: VAECLSQPRAEV*KKSPRGERDAR Trigger: GCGGGCGTCCCGCTCGCCTCGCGGTGATTTCTTCCAGACTTCCGCCCGTGGTTGTGAGAGGCATTCAGCTAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000476918.1 |
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| CDS GCA 72 bp | GGGTCTGTGCTCAGCGCAGCCGTCATCTGCGCCCGCTaGAGGTTCCGGAGGTGCTTCACTGTCATTTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: GSVLSAAVICAR*RFRRCFTVISR Trigger: TCTGGAAATGACAGTGAAGCACCTCCGGAACCTGCAGCGGGCGCAGATGACGGCTGCGCTGAGCACAGACCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS TCA 72 bp | TGGACAGGAAGCGGGTCACCTCGTTCATGCACTCGCTaGAGCCGGCTCGGTACTTCCCCAGCACACTTGGGT | + |
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Preference number: 6 (lower is better) Translates to: WTGSGSPRSCTR*SRLGTSPAHLG Trigger: ACCCAAGTGTGCTGGGGAAGTACCGAGCCGGCTTCAGCGAGTGCATGAACGAGGTGACCCGCTTCCTGTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS CCA 72 bp | AGGAAAGCAAACTGGCCATCGGGAGCCGGTACCACCTaGAAGCCTCCAAACACCTTAGCCGCCTCTCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RKANWPSGAGTT*KPPNTLAASPA Trigger: GGCTGGAGAGGCGGCTAAGGTGTTTGGAGGCTTCCAGGTGGTACCGGCTCCCGATGGCCAGTTTGCTTTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000232424.4 |
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| CDS TCA 72 bp | CCGCGAGCTCTGCATAGAGTAGGCAAGAAAGGAAAGTaGGCCCCGTGTCAGCTGCTTCAGAGTGCTGGGGGT | + |
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Preference number: 6 (lower is better) Translates to: PRALHRVGKKGK*APCQLLQSAGG Trigger: ACCCCCAGCACTCTGAAGCAGCTGACACGGGGCTCACTTTCCTTTCTTGCCTACTCTATGCAGAGCTCGCGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000476918.1 |
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| CDS CAA 72 bp | TGCTCAGATGCTGTCTTTGGTTTATCCGGTGTCGTGTaGACACTGGCTGGGGTAGCAGCCACCGGGGACGAG | + |
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Preference number: 6 (lower is better) Translates to: CSDAVFGLSGVV*TLAGVAATGDE Trigger: CTCGTCCCCGGTGGCTGCTACCCCAGCCAGTGTCAACACGACACCGGATAAACCAAAGACAGCATCTGAGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000232424.4 ENST00000476918.1 |
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| CDS CCA 72 bp | TGTCTTTGGTTTATCCGGTGTCGTGTTGACACTGGCTaGGGTAGCAGCCACCGGGGACGAGGAATTTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: CLWFIRCRVDTG*GSSHRGRGIFL Trigger: GAGAAAAATTCCTCGTCCCCGGTGGCTGCTACCCCAGCCAGTGTCAACACGACACCGGATAAACCAAAGACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000232424.4 ENST00000476918.1 |
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| CDS TCA 72 bp | AGTGCTGAGGGTTTATTATATTTTGTGGCTACTTGGTaGTCAGTAGCGCTGTTCCAGGACCAAGGAGAGAGG | + |
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Preference number: 6 (lower is better) Translates to: SAEGLLYFVATW*SVALFQDQGER Trigger: CCTCTCTCCTTGGTCCTGGAACAGCGCTACTGATCACCAAGTAGCCACAAAATATAATAAACCCTCAGCACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000232424.4 ENST00000476918.1 |
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