RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HERC6 (Homo sapiens)

Ensembl gene IDs: ENSG00000138642

Ensembl transcript IDs: ENST00000264346.12, ENST00000273960.7, ENST00000380265.9, ENST00000502870.1, ENST00000504905.5, ENST00000506714.5, ENST00000506842.1, ENST00000515365.1

Found 372 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTTGAATTCTCCAATCCCCAGCTGCCCTTCAGAACCAGCTCCCCATaGGAAGACCCTTCCTTTGTGGCACACAGCCAGGGAGTGCTCCTT +
Preference number: 1 (lower is better)
Translates to: LEFSNPQLPFRTSSP*EDPSFVAHSQGVLL
Trigger: AAGGAGCACTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTTCGCATGGGGAGCTGGTTCTGAAGGGCAGCTGGGGATTGGAGAATTCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504905.5
3UTR CCA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTaGGAGTGGGCTAGAGCAAGTGGCTCAAGAGCCCTGGTAGCAAAA +
Preference number: 1 (lower is better)
Translates to: AQGSEAAKVKVHSTG*EWARASGSRALVAK
Trigger: TTTTGCTACCAGGGCTCTTGAGCCACTTGCTCTAGCCCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR TCA 90 bp ATATTCTGGCTTGGTCATCTCTTCAAACATACAGTGGAAGAACTCTaGACTAACCCCTCCAGACTCAGGACAAATTTCATTAATAAATTC +
Preference number: 1 (lower is better)
Translates to: IFWLGHLFKHTVEEL*TNPSRLRTNFINKF
Trigger: GAATTTATTAATGAAATTTGTCCTGAGTCTGGAGGGGTTAGTTCAGAGTTCTTCCACTGTATGTTTGAAGAGATGACCAAGCCAGAATAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
3UTR CAA 90 bp CCCAGCTGCCCTTCAGAACCAGCTCCCCATGCGAAGACCCTTCCTTaGTGGCACACAGCCAGGGAGTGCTCCTTCCCGCAGCTCACGAGA +
Preference number: 2 (lower is better)
Translates to: PSCPSEPAPHAKTLP*WHTARECSFPQLTR
Trigger: TCTCGTGAGCTGCGGGAAGGAGCACTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTTCGCATGGGGAGCTGGTTCTGAAGGGCAGCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504905.5
3UTR-3UTR CCA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGGCCAGAGTGCAGGTCTaGCCCATGGCCAATCAGAGG +
Preference number: 2 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWARVQV*PMANQR
Trigger: CCTCTGATTGGCCATGGGCCAGACCTGCACTCTGGC...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR-3UTR GCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCGTTCAGACTCTTCAGTaGCAGGGAGTGTGTCCAAGT +
Preference number: 2 (lower is better)
Translates to: NHRPVFRLFSARECVQVIVQTLQ*QGVCPS
Trigger: ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAAC...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR-3UTR TCA 90 bp GACCAATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTAGATTTTGCACCCTTTaGCCATCATCATCATCTCCC +
Preference number: 2 (lower is better)
Translates to: DQSQASVQTLQCQGVCPSRFCTL*PSSSSP
Trigger: GGGAGATGATGATGATGGTCAAAGGGTGCAAAATCT...ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR-3UTR TCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCTGGAGCACAAGGCAGTaGAGCAGCAAAAGTGAAAGT +
Preference number: 2 (lower is better)
Translates to: NHRPVFRLFSARECVQVIWSTRQ*SSKSES
Trigger: ACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCA...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR-3UTR GCA 90 bp ACACTTGGCTATCTTTTGATAATGCCAGGGAGTGGTAGTGTCCACAGGAAACTTTCTCCAATCCCCAGCTaGCCTTCAGAACCAGCTCCC +
Preference number: 2 (lower is better)
Translates to: TLGYLLIMPGSGSVHRKLSPIPS*PSEPAP
Trigger: GGGAGCTGGTTCTGAAGGGCAGCTGGGGATTGGAGA...AAGTTTCCTGTGGACACTACCACTCCCTGGCATTATCAAAAGATAGCCAAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504905.5
3UTR-3UTR TCA 90 bp CTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACTGCCTCAGTCTTGTGTaGGATTTTGCACCCTTTGAC +
Preference number: 2 (lower is better)
Translates to: LFSARECVQVILRSLSLYCLSLV*DFAPFD
Trigger: GTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCA...GTACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR-3UTR TCA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGTGGCCAATCAGAGGCTaGTGTGGTTTGATACCTTAT +
Preference number: 2 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWWPIRG*CGLIPY
Trigger: ATAAGGTATCAAACCACATCAGCCTCTGATTGGCCA...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR-3UTR TCA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGATGAATGTCCTGGAATaGACCAATCATTGGCCAGAG +
Preference number: 2 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWMNVLE*TNHWPE
Trigger: CTCTGGCCAATGATTGGTTCATTCCAGGACATTCAT...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR CAA 90 bp CCTATCTCTGTACCCTATTCTCCTGCCTCAGTCTTGTGTGAGATTTaGCACCCTTTGACCATCATCATCATCTCCCCATTCCCCCAATCT +
Preference number: 2 (lower is better)
Translates to: PISVPYSPASVLCEI*HPLTIIIISPFPQS
Trigger: AGATTGGGGGAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGAATAGGGTACAGAGATAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR-3UTR TCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGAGATTTTGCACCCTTTaGCCATCATCATCATCTCCC +
Preference number: 2 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWRFCTL*PSSSSP
Trigger: GGGAGATGATGATGATGGTCAAAGGGTGCAAAATCT...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR-3UTR TCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGTGGCCAATCAGAGGCTaGTGTGGTTTGATACCTTAT +
Preference number: 2 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWWPIRG*CGLIPY
Trigger: ATAAGGTATCAAACCACATCAGCCTCTGATTGGCCA...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR-3UTR CCA 90 bp AACATAGTCTCTCTTGTTGGTTTGGTCCACAGGTATGGAGATCCCATTTGGAATGTACATTCCACAGGGTaGGAGTGGGCTAGAGCAAGT +
Preference number: 2 (lower is better)
Translates to: NIVSLVGLVHRYGDPIWNVHSTG*EWARAS
Trigger: ACTTGCTCTAGCCCACTCCCACCCTGTGGAATGTAC...ATTCCAAATGGGATCTCCATACCTGTGGACCAAACCAACAAGAGAGACTATGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273960.7
3UTR-3UTR CCA 90 bp GTAGAAATGTCTAAGTATCTCCTTCTCACAGACTCTATAAAATCCTCTCTGAAAGCCAGAGTGCAGGTCTaGCCCATGGCCAATCAGAGG +
Preference number: 2 (lower is better)
Translates to: VEMSKYLLLTDSIKSSLKARVQV*PMANQR
Trigger: CCTCTGATTGGCCATGGGCCAGACCTGCACTCTGGC...TTTCAGAGAGGATTTTATAGAGTCTGTGAGAAGGAGATACTTAGACATTTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
3UTR-3UTR CCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGCTAAGTCCACATCAATaGAAGTCGTTTCTCCAGTTC +
Preference number: 2 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWLSPHQ*KSFLQF
Trigger: GAACTGGAGAAACGACTTCCATTGATGTGGACTTAG...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
3UTR-3UTR GCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTGTTCAGACTCTTCAGTaGCAGGGAGTGTGTCCAAGT +
Preference number: 2 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTVQTLQ*QGVCPS
Trigger: ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAAC...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR-3UTR GCA 90 bp CCATATTCTGGCTTGGTCATCTCTTCAAACATACAGTGGAAGAACTCTGAACTAGTTCAGACTCTTCAGTaGCAGGGAGTGTGTCCAAGT +
Preference number: 2 (lower is better)
Translates to: PYSGLVISSNIQWKNSELVQTLQ*QGVCPS
Trigger: ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAAC...TAGTTCAGAGTTCTTCCACTGTATGTTTGAAGAGATGACCAAGCCAGAATATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273960.7
3UTR-3UTR CCA 90 bp CCATATTCTGGCTTGGTCATCTCTTCAAACATACAGTGGAAGAACTCTGAACTAGTGTGGAGAATGGCATaGAAGAGCTCTGAGCAGATC +
Preference number: 2 (lower is better)
Translates to: PYSGLVISSNIQWKNSELVWRMA*KSSEQI
Trigger: GATCTGCTCAGAGCTCTTCCATGCCATTCTCCACAC...TAGTTCAGAGTTCTTCCACTGTATGTTTGAAGAGATGACCAAGCCAGAATATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273960.7
3UTR-3UTR TCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTTGCCTCAGTCTTGTGTaGGATTTTGCACCCTTTGAC +
Preference number: 2 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTCLSLV*DFAPFD
Trigger: GTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCA...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR-3UTR GCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTTGTATGCCTCTTGCATaGAGCCTATCACGTCCTGTA +
Preference number: 2 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTCMPLA*SLSRPV
Trigger: TACAGGACGTGATAGGCTGCATGCAAGAGGCATACA...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273960.7
3UTR-3UTR TCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTGTGAAGCAGCAAAAGTaGAAGTACATTCCACAGGGT +
Preference number: 2 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTVKQQK*KYIPQG
Trigger: ACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCAC...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR-3UTR TCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTGAGGCTGATGTGGTTTaGTACCTTATGCAAATGAAG +
Preference number: 2 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTEADVV*YLMQMK
Trigger: CTTCATTTGCATAAGGTATCAAACCACATCAGCCTC...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR-3UTR GCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTGATGGCTACTTGAAGTaGTTCCTCCATTCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTDGYLK*FLHSFH
Trigger: ATGGAAAGAATGGAGGAAGCACTTCAAGTAGCCATC...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273960.7
3UTR-3UTR CCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGCAGCCAATCCAAGACTaGTGTGGTTTGACTCCTTAT +
Preference number: 2 (lower is better)
Translates to: FLMVTPYVNERLTHSQLEQPIQD*CGLTPY
Trigger: ATAAGGAGTCAAACCACACCAGTCTTGGATTGGCTG...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR-3UTR TCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCTGTATAGTAGGATGTaGTTTTTGGTATCCTTGCTC +
Preference number: 2 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTLYSRM*FLVSLL
Trigger: GAGCAAGGATACCAAAAATCACATCCTACTATACAG...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273960.7
3UTR-3UTR TCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTAGGGAGAGAATATTATaGCAAGTTATTGATGTTGGG +
Preference number: 2 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTRERIL*QVIDVG
Trigger: CCCAACATCAATAACTTGTCATAATATTCTCTCCCT...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273960.7
3UTR CCA 72 bp TCAGAACCAGCTCCCCATGCGAAGACCCTTCCTTTGTaGCACACAGCCAGGGAGTGCTCCTTCCCGCAGCTC +
Preference number: 3 (lower is better)
Translates to: SEPAPHAKTLPL*HTARECSFPQL
Trigger: GAGCTGCGGGAAGGAGCACTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTTCGCATGGGGAGCTGGTTCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504905.5
3UTR CCA 72 bp GCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTaGGCTAGAGCAAGTGGCTCAAGAGCCCTGGTAGCA +
Preference number: 3 (lower is better)
Translates to: AAKVKVHSTGWE*ARASGSRALVA
Trigger: TGCTACCAGGGCTCTTGAGCCACTTGCTCTAGCCCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR CCA 72 bp AGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTaGGAGTGGGCTAGAGCAAGTGGCTCAAGAGCCCTG +
Preference number: 3 (lower is better)
Translates to: SEAAKVKVHSTG*EWARASGSRAL
Trigger: CAGGGCTCTTGAGCCACTTGCTCTAGCCCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR-3UTR CAA 90 bp ACACTTGGCTATCTTTTGATAATGCCAGGGAGTGGTAGTGTCCACAGGAAACTTGCGAAGACCCTTCCTTaGTGGCACACAGCCAGGGAG +
Preference number: 3 (lower is better)
Translates to: TLGYLLIMPGSGSVHRKLAKTLP*WHTARE
Trigger: CTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTTCGC...AAGTTTCCTGTGGACACTACCACTCCCTGGCATTATCAAAAGATAGCCAAGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504905.5
3UTR-3UTR CAA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGGAGATTTTGCACCCTTaGACCATCATCATCATCTCC +
Preference number: 3 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWEILHP*TIIIIS
Trigger: GGAGATGATGATGATGGTCAAAGGGTGCAAAATCTC...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR-3UTR CAA 90 bp CCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCGTCTTGTGTGAGATTTaGCACCCTTTGACCATCATC +
Preference number: 3 (lower is better)
Translates to: PVFRLFSARECVQVILRSVLCEI*HPLTII
Trigger: GATGATGGTCAAAGGGTGCAAAATCTCACACAAGAC...GGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR CCA 72 bp AGACTGACTCACAGCCAATTAGAGACTGAGGTGAATTaGCTCACAGCCAATCCAAGACTGGTGTGGTTTGAC +
Preference number: 3 (lower is better)
Translates to: RLTHSQLETEVN*LTANPRLVWFD
Trigger: GTCAAACCACACCAGTCTTGGATTGGCTGTGAGCCAATTCACCTCAGTCTCTAATTGGCTGTGAGTCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR-3UTR CAA 90 bp CTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACGTCTTGTGTGAGATTTaGCACCCTTTGACCATCATC +
Preference number: 3 (lower is better)
Translates to: LFSARECVQVILRSLSLYVLCEI*HPLTII
Trigger: GATGATGGTCAAAGGGTGCAAAATCTCACACAAGAC...GTACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR TCA 72 bp GTGGTGAAGGAGTGGATTTATTGGAGCACAAGGCAGTaGAGCAGCAAAAGTGAAAGTACATTCCACAGGGTG +
Preference number: 3 (lower is better)
Translates to: VVKEWIYWSTRQ*SSKSESTFHRV
Trigger: CACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAATAAATCCACTCCTTCACCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR-3UTR CAA 90 bp CCAATGTCATCAGCAGCATCATCTAGAACTTCTTGCAAACTCTTCCCCAACCGAGTCTTGTGTGAGATTTaGCACCCTTTGACCATCATC +
Preference number: 3 (lower is better)
Translates to: PMSSAASSRTSCKLFPNRVLCEI*HPLTII
Trigger: GATGATGGTCAAAGGGTGCAAAATCTCACACAAGAC...TCGGTTGGGGAAGAGTTTGCAAGAAGTTCTAGATGATGCTGCTGATGACATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
3UTR TCA 72 bp TATCTCTGTACCCTATTCTCCTGCCTCAGTCTTGTGTaGGATTTTGCACCCTTTGACCATCATCATCATCTC +
Preference number: 3 (lower is better)
Translates to: YLCTLFSCLSLV*DFAPFDHHHHL
Trigger: GAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGAATAGGGTACAGAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR TCA 72 bp CTTGGTCATCTCTTCAAACATACAGTGGAAGAACTCTaGACTAACCCCTCCAGACTCAGGACAAATTTCATT +
Preference number: 3 (lower is better)
Translates to: LGHLFKHTVEEL*TNPSRLRTNFI
Trigger: AATGAAATTTGTCCTGAGTCTGGAGGGGTTAGTTCAGAGTTCTTCCACTGTATGTTTGAAGAGATGACCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
3UTR GCA 72 bp ACAGCGAAATACTATTTCCATTTTCTGTATGCCTCTTaGATGCAGCCTATCACGTCCTGTAAGGAAAAAGAG +
Preference number: 3 (lower is better)
Translates to: TAKYYFHFLYAS*MQPITSCKEKE
Trigger: CTCTTTTTCCTTACAGGACGTGATAGGCTGCATGCAAGAGGCATACAGAAAATGGAAATAGTATTTCGCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000273960.7
3UTR CCA 72 bp ATGGAGATCCCATTTGGAATTAAGTCAACATCATTTTaGTCCCAGTGTATAGAAAAGCGTATGCAGAGCGCA +
Preference number: 3 (lower is better)
Translates to: MEIPFGIKSTSF*SQCIEKRMQSA
Trigger: TGCGCTCTGCATACGCTTTTCTATACACTGGGACCAAAATGATGTTGACTTAATTCCAAATGGGATCTCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273960.7
3UTR-3UTR CAA 90 bp GTAGAAATGTCTAAGTATCTCCTTCTCACAGACTCTATAAAATCCTCTCTGAAATCTCCTGCCTCAGTCTaGTGTGAGATTTTGCACCCT +
Preference number: 3 (lower is better)
Translates to: VEMSKYLLLTDSIKSSLKSPASV*CEILHP
Trigger: AGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA...TTTCAGAGAGGATTTTATAGAGTCTGTGAGAAGGAGATACTTAGACATTTCTAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273960.7
3UTR-3UTR CAA 90 bp CCATATTCTGGCTTGGTCATCTCTTCAAACATACAGTGGAAGAACTCTGAACTAAGTCGACAGTTAGCTTaGTTTATTAGGACTTGCAAA +
Preference number: 3 (lower is better)
Translates to: PYSGLVISSNIQWKNSELSRQLA*FIRTCK
Trigger: TTTGCAAGTCCTAATAAACAAAGCTAACTGTCGACT...TAGTTCAGAGTTCTTCCACTGTATGTTTGAAGAGATGACCAAGCCAGAATATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273960.7
3UTR TCA 72 bp ATACTTAGGGAGGGAGAGAATATTATGACAAGTTATTaGTGTTGGGTGATCTCTTTCACTGAAAGTTTCAGG +
Preference number: 3 (lower is better)
Translates to: ILREGENIMTSY*CWVISFTESFR
Trigger: CCTGAAACTTTCAGTGAAAGAGATCACCCAACATCAATAACTTGTCATAATATTCTCTCCCTCCCTAAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273960.7
3UTR CCA 72 bp AAACATAGTCTCTCTTGTTGGTTTGGTCCACAGGTATaGAGATCCCATTTGGAATTAAGTCAACATCATTTT +
Preference number: 3 (lower is better)
Translates to: KHSLSCWFGPQV*RSHLELSQHHF
Trigger: AAAATGATGTTGACTTAATTCCAAATGGGATCTCCATACCTGTGGACCAAACCAACAAGAGAGACTATGTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273960.7
3UTR GCA 72 bp AACAACTGTATAGTAGGATGTGATTTTTGGTATCCTTaGTCATACTTTGAATTCTGTTCAAACTGTTTCCAG +
Preference number: 3 (lower is better)
Translates to: NNCIVGCDFWYP*SYFEFCSNCFQ
Trigger: CTGGAAACAGTTTGAACAGAATTCAAAGTATGAGCAAGGATACCAAAAATCACATCCTACTATACAGTTGTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR GCA 90 bp AACCAGCTCCCCATGCGAAGACCCTTCCTTTGTGGCACACAGCCAGGGAGTGCTTCCCCGCTGGCCGCCTaGAGTAGCTCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: NQLPMRRPFLCGTQPGSASPLAA*SSSAPG
Trigger: CCCCGGGGCTGAGCTACTGCAGGCGGCCAGCGGGGA...AGCACTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTTCGCATGGGGAGCTGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000504905.5
CDS-3UTR TCA 90 bp CAGCTGCCCTTCAGAACCAGCTCCCCATGCGAAGACCCTTCCTTTGTGGCACACCCCCTGCGGCCCAGCTaGCCCCTGCTGTTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: QLPFRTSSPCEDPSFVAHPLRPS*PLLLSP
Trigger: CGGAGACAACAGCAGGGGTCAGCTGGGCCGCAGGGG...GTGTGCCACAAAGGAAGGGTCTTCGCATGGGGAGCTGGTTCTGAAGGGCAGCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000504905.5
CDS-3UTR GCA 90 bp GACCCTTCCTTTGTGGCACACAGCCAGGGAGTGCTCCTTCCCGCAGCTCACGAGGGCCCAGCTGACCCCTaGTGTTGTCTCCGCACGAGA +
Preference number: 4 (lower is better)
Translates to: DPSFVAHSQGVLLPAAHEGPADP*CCLRTR
Trigger: TCTCGTGCGGAGACAACAGCAGGGGTCAGCTGGGCC...CTCGTGAGCTGCGGGAAGGAGCACTCCCTGGCTGTGTGCCACAAAGGAAGGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504905.5
CDS-3UTR GCA 90 bp CCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCGCCGTCCTCCGGCGCTaGAGCTCCCTGGAGTCGGCG +
Preference number: 4 (lower is better)
Translates to: PVFRLFSARECVQVILRSAVLRR*SSLESA
Trigger: CGCCGACTCCAGGGAGCTGCAGCGCCGGAGGACGGC...GGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp CCTTCAGAACCAGCTCCCCATGCGAAGACCCTTCCTTTGTGGCACACAGCCAGGCACACAGCCAGGGAGTaGTCCTTCCCGCAGCTCACG +
Preference number: 4 (lower is better)
Translates to: PSEPAPHAKTLPLWHTARHTARE*SFPQLT
Trigger: CGTGAGCTGCGGGAAGGAGCACTCCCTGGCTGTGTG...CCTGGCTGTGTGCCACAAAGGAAGGGTCTTCGCATGGGGAGCTGGTTCTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504905.5
3UTR CAA 72 bp CCTTCAGAACCAGCTCCCCATGCGAAGACCCTTCCTTaGTGGCACACAGCCAGGGAGTGCTCCTTCCCGCAG +
Preference number: 4 (lower is better)
Translates to: PSEPAPHAKTLP*WHTARECSFPQ
Trigger: CTGCGGGAAGGAGCACTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTTCGCATGGGGAGCTGGTTCTGAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504905.5
CDS-3UTR TCA 90 bp CCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCCCCTGCGGCCCAGCTaGCCCCTGCTGTTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: PVFRLFSARECVQVILRSPLRPS*PLLLSP
Trigger: CGGAGACAACAGCAGGGGTCAGCTGGGCCGCAGGGG...GGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGG
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTTCCCCGCTGGCCGCCTaGAGTAGCTCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCSPLAA*SSSAPG
Trigger: CCCCGGGGCTGAGCTACTGCAGGCGGCCAGCGGGGA...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp CTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACTCCCCGCTGGCCGCCTaGAGTAGCTCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: LFSARECVQVILRSLSLYSPLAA*SSSAPG
Trigger: CCCCGGGGCTGAGCTACTGCAGGCGGCCAGCGGGGA...GTACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp GACCAATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTAGTGGCGCTCCCCGCTaGCCGCCTGCAGTAGCTCAG +
Preference number: 4 (lower is better)
Translates to: DQSQASVQTLQCQGVCPSSGAPR*PPAVAQ
Trigger: CTGAGCTACTGCAGGCGGCCAGCGGGGAGCGCCACT...ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp GAACCAGCTCCCCATGCGAAGACCCTTCCTTTGTGGCACACAGCCAGGGAGTGCCACGAGAGGACCCTGTaGTTGGTCAGCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: EPAPHAKTLPLWHTARECHERTL*LVSSSR
Trigger: TCTGCTGCTGCTGACCAACCACAGGGTCCTCTCGTG...GCACTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTTCGCATGGGGAGCTGGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504905.5
CDS-3UTR CCA 90 bp GACCCTTCCTTTGTGGCACACAGCCAGGGAGTGCTCCTTCCCGCAGCTCACGAGAAGACCCTTCCTTTGTaGCACACAGCCAGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: DPSFVAHSQGVLLPAAHEKTLPL*HTAREC
Trigger: GCACTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTT...CTCGTGAGCTGCGGGAAGGAGCACTCCCTGGCTGTGTGCCACAAAGGAAGGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000504905.5
CDS-3UTR GCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTGCGCCCTGTCGCCTaGTCCGGATTCCGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: NHRPVFRLFSARECVQVILRPVA*SGFRRS
Trigger: GGACCGACGGAATCCGGAGCAGGCGACAGGGCGCAG...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGCCGTCCTCCGGCGCTaGAGCTCCCTGGAGTCGGCG +
Preference number: 4 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWAVLRR*SSLESA
Trigger: CGCCGACTCCAGGGAGCTGCAGCGCCGGAGGACGGC...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGCCCCTGCGGCCCAGCTaGCCCCTGCTGTTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWPLRPS*PLLLSP
Trigger: CGGAGACAACAGCAGGGGTCAGCTGGGCCGCAGGGG...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp GACCAATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCCACTGAGGGCCAGCTaGCCGGCACTGTTACTTCCC +
Preference number: 4 (lower is better)
Translates to: DQSQASVQTLQCQGVCPSPLRAS*PALLLP
Trigger: GGGAAGTAACAGTGCCGGGCAGCTGGCCCTCAGTGG...ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp CTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACGGCGCTGCAGCTCCCTaGAGTCGGCGCCCCAACAGA +
Preference number: 4 (lower is better)
Translates to: LFSARECVQVILRSLSLYGAAAP*SRRPNR
Trigger: TCTGTTGGGGCGCCGACTCCAGGGAGCTGCAGCGCC...GTACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCGCCGTCCTCCGGCGCTaGAGCTCCCTGGAGTCGGCG +
Preference number: 4 (lower is better)
Translates to: SVLCEILHPLTIIIISPFAVLRR*SSLESA
Trigger: CGCCGACTCCAGGGAGCTGCAGCGCCGGAGGACGGC...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp ACACTTGGCTATCTTTTGATAATGCCAGGGAGTGGTAGTGTCCACAGGAAACTTGCCGTCCTCCGGCGCTaGAGCTCCCTGGAGTCGGCG +
Preference number: 4 (lower is better)
Translates to: TLGYLLIMPGSGSVHRKLAVLRR*SSLESA
Trigger: CGCCGACTCCAGGGAGCTGCAGCGCCGGAGGACGGC...AAGTTTCCTGTGGACACTACCACTCCCTGGCATTATCAAAAGATAGCCAAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504905.5
CDS-3UTR GCA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGGGCCCAGCTGACCCCTaGTGTTGTCTCCGCACGAGA +
Preference number: 4 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWGPADP*CCLRTR
Trigger: TCTCGTGCGGAGACAACAGCAGGGGTCAGCTGGGCC...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp GCTGCCCTTCAGAACCAGCTCCCCATGCGAAGACCCTTCCTTTGTGGCACACAGAGAACCAGCTCCCCATaGGAAGACCCTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: AALQNQLPMRRPFLCGTQRTSSP*EDPSFV
Trigger: CACAAAGGAAGGGTCTTCGCATGGGGAGCTGGTTCT...CTGTGTGCCACAAAGGAAGGGTCTTCGCATGGGGAGCTGGTTCTGAAGGGCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504905.5
CDS-3UTR CCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGGCGCTGCAGCTCCCTaGAGTCGGCGCCCCAACAGA +
Preference number: 4 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWGAAAP*SRRPNR
Trigger: TCTGTTGGGGCGCCGACTCCAGGGAGCTGCAGCGCC...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp GACCAATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTGCCAGAGTGCAGGTCTaGCCCATGGCCAATCAGAGG +
Preference number: 4 (lower is better)
Translates to: DQSQASVQTLQCQGVCPSARVQV*PMANQR
Trigger: CCTCTGATTGGCCATGGGCCAGACCTGCACTCTGGC...ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATTGGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp GACCAATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTTCTCCAATCCCCAGCTaGCCTTCAGAACCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: DQSQASVQTLQCQGVCPSSPIPS*PSEPAP
Trigger: GGGAGCTGGTTCTGAAGGGCAGCTGGGGATTGGAGA...ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp CTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACTGCCTGAATTGGTTCTaGCAGCTCCCCGCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: LFSARECVQVILRSLSLYCLNWF*QLPALR
Trigger: GCGCAGCGCGGGGAGCTGCCAGAACCAATTCAGGCA...GTACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp CCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCGCCAGAGTGCAGGTCTaGCCCATGGCCAATCAGAGG +
Preference number: 4 (lower is better)
Translates to: PVFRLFSARECVQVILRSARVQV*PMANQR
Trigger: CCTCTGATTGGCCATGGGCCAGACCTGCACTCTGGC...GGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGGTCAGGGCCTCCGGATaGGTTGGCTTGCTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWVRASG*VGLLVS
Trigger: TGACACAAGCAAGCCAACTCATCCGGAGGCCCTGAC...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR GCA 90 bp CCAATGTCATCAGCAGCATCATCTAGAACTTCTTGCAAACTCTTCCCCAACCGATTCCGTCGGTCCCGCTaGGACAGGCTCCCGAACGCT +
Preference number: 4 (lower is better)
Translates to: PMSSAASSRTSCKLFPNRFRRSR*DRLPNA
Trigger: AGCGTTCGGGAGCCTGTCGCAGCGGGACCGACGGAA...TCGGTTGGGGAAGAGTTTGCAAGAAGTTCTAGATGATGCTGCTGATGACATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR GCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTTCCCCGCTGGCCGCCTaGAGTAGCTCAGCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTSPLAA*SSSAPG
Trigger: CCCCGGGGCTGAGCTACTGCAGGCGGCCAGCGGGGA...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGCACACAGCCAGGGAGTaGTCCTTCCCGCAGCTCACG +
Preference number: 4 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWHTARE*SFPQLT
Trigger: CGTGAGCTGCGGGAAGGAGCACTCCCTGGCTGTGTG...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCTCTCCAATCCCCAGCTaGCCTTCAGAACCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: NHRPVFRLFSARECVQVISPIPS*PSEPAP
Trigger: GGGAGCTGGTTCTGAAGGGCAGCTGGGGATTGGAGA...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp ACACTTGGCTATCTTTTGATAATGCCAGGGAGTGGTAGTGTCCACAGGAAACTTGGCGCTGCAGCTCCCTaGAGTCGGCGCCCCAACAGA +
Preference number: 4 (lower is better)
Translates to: TLGYLLIMPGSGSVHRKLGAAAP*SRRPNR
Trigger: TCTGTTGGGGCGCCGACTCCAGGGAGCTGCAGCGCC...AAGTTTCCTGTGGACACTACCACTCCCTGGCATTATCAAAAGATAGCCAAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504905.5
CDS-3UTR GCA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCGGCCCAGCTGACCCCTaGTGTTGTCTCCGCACGAGA +
Preference number: 4 (lower is better)
Translates to: SPASVLCEILHPLTIIIIGPADP*CCLRTR
Trigger: TCTCGTGCGGAGACAACAGCAGGGGTCAGCTGGGCC...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp CCAATGTCATCAGCAGCATCATCTAGAACTTCTTGCAAACTCTTCCCCAACCGACACACAGCCAGGGAGTaGTCCTTCCCGCAGCTCACG +
Preference number: 4 (lower is better)
Translates to: PMSSAASSRTSCKLFPNRHTARE*SFPQLT
Trigger: CGTGAGCTGCGGGAAGGAGCACTCCCTGGCTGTGTG...TCGGTTGGGGAAGAGTTTGCAAGAAGTTCTAGATGATGCTGCTGATGACATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR GCA 90 bp GACCAATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTAGAACCAGCTCCCCATaGGAAGACCCTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: DQSQASVQTLQCQGVCPSRTSSP*EDPSFV
Trigger: CACAAAGGAAGGGTCTTCGCATGGGGAGCTGGTTCT...ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTTCTCCAATCCCCAGCTaGCCTTCAGAACCAGCTCCC +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCSPIPS*PSEPAP
Trigger: GGGAGCTGGTTCTGAAGGGCAGCTGGGGATTGGAGA...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp CCAATGTCATCAGCAGCATCATCTAGAACTTCTTGCAAACTCTTCCCCAACCGACCACTGAGGGCCAGCTaGCCGGCACTGTTACTTCCC +
Preference number: 4 (lower is better)
Translates to: PMSSAASSRTSCKLFPNRPLRAS*PALLLP
Trigger: GGGAAGTAACAGTGCCGGGCAGCTGGCCCTCAGTGG...TCGGTTGGGGAAGAGTTTGCAAGAAGTTCTAGATGATGCTGCTGATGACATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR CCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTCACGAGAGGACCCTGTaGTTGGTCAGCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCHERTL*LVSSSR
Trigger: TCTGCTGCTGCTGACCAACCACAGGGTCCTCTCGTG...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp CCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCGGCCTCCGGATGAGTTaGCTTGCTTGTGTCACTTGG +
Preference number: 4 (lower is better)
Translates to: PVFRLFSARECVQVILRSGLRMS*LACVTW
Trigger: CCAAGTGACACAAGCAAGCCAACTCATCCGGAGGCC...GGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CCA 90 bp CTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACCCGAACGCTGGTGACTaGGTGCGCGATGATTTCCTG +
Preference number: 4 (lower is better)
Translates to: LFSARECVQVILRSLSLYPNAGD*VRDDFL
Trigger: CAGGAAATCATCGCGCACCCAGTCACCAGCGTTCGG...GTACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp ACACTTGGCTATCTTTTGATAATGCCAGGGAGTGGTAGTGTCCACAGGAAACTTAGGGTTTCCAATGCCTaGCAGCTCCCCGCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: TLGYLLIMPGSGSVHRKLRVSNA*QLPALR
Trigger: GCGCAGCGCGGGGAGCTGCCAGGCATTGGAAACCCT...AAGTTTCCTGTGGACACTACCACTCCCTGGCATTATCAAAAGATAGCCAAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000504905.5
CDS-3UTR TCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCAGGGTTTCCAATGCCTaGATTGGTTCTGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: NHRPVFRLFSARECVQVIRVSNA*IGSGSS
Trigger: GGAGCTGCCAGAACCAATTCAGGCATTGGAAACCCT...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCAGTACATCCCGCTTCTaGGCCCTGTCGCCTGCTCCG +
Preference number: 4 (lower is better)
Translates to: SVLCEILHPLTIIIISPFSTSRF*ALSPAP
Trigger: CGGAGCAGGCGACAGGGCGCAGAAGCGGGATGTACT...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCCCACTGAGGGCCAGCTaGCCGGCACTGTTACTTCCC +
Preference number: 4 (lower is better)
Translates to: SVLCEILHPLTIIIISPFPLRAS*PALLLP
Trigger: GGGAAGTAACAGTGCCGGGCAGCTGGCCCTCAGTGG...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp GACCAATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTAGGACTGGGGGTTTCTaGAGGTATCAGGTGGTTATC +
Preference number: 4 (lower is better)
Translates to: DQSQASVQTLQCQGVCPSRTGGF*RYQVVI
Trigger: GATAACCACCTGATACCTGCAGAAACCCCCAGTCCT...ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATTGGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000273960.7
CDS-3UTR CCA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCTGCCTGAATTGGTTCTaGCAGCTCCCCGCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: SVLCEILHPLTIIIISPFCLNWF*QLPALR
Trigger: GCGCAGCGCGGGGAGCTGCCAGAACCAATTCAGGCA...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTTTCCAATGCCTGAATTaGTTCTGGCAGCTCCCCGCG +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCFQCLN*FWQLPA
Trigger: CGCGGGGAGCTGCCAGAACCAATTCAGGCATTGGAA...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTAAGACCCTTCCTTTGTaGCACACAGCCAGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCKTLPL*HTAREC
Trigger: GCACTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTT...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp GACCAATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCTTGTTGCTTTGCACTaGGACATTACGCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: DQSQASVQTLQCQGVCPSLVALH*DITPTE
Trigger: CTCAGTGGGCGTAATGTCCCAGTGCAAAGCAACAAG...ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp CCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCAACACTTTCCCGTCCTaGGTAAGCACCGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: PVFRLFSARECVQVILRSNTFPS*VSTAVC
Trigger: ACACACTGCGGTGCTTACCCAGGACGGGAAAGTGTT...GGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGACAGTGGAAGAACTCTaGACTAACCCCTCCAGACTC +
Preference number: 4 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWTVEEL*TNPSRL
Trigger: GAGTCTGGAGGGGTTAGTTCAGAGTTCTTCCACTGT...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTTTCCGTCGGTCCCGCTaGGACAGGCTCCCGAACGCT +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTFRRSR*DRLPNA
Trigger: AGCGTTCGGGAGCCTGTCGCAGCGGGACCGACGGAA...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGCTGCGCCCTGTCGCCTaGTCCGGATTCCGTCGGTCC +
Preference number: 4 (lower is better)
Translates to: FLMVTPYVNERLTHSQLELRPVA*SGFRRS
Trigger: GGACCGACGGAATCCGGAGCAGGCGACAGGGCGCAG...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp GACCAATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCTGAGAGAGGCTTGTTaGTTTGCACTGGGACATTAC +
Preference number: 4 (lower is better)
Translates to: DQSQASVQTLQCQGVCPSLREAC*FALGHY
Trigger: GTAATGTCCCAGTGCAAAGCAACAAGCCTCTCTCAG...ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp GACCAATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTAAGCACCGCAGTGTGTaGATCACCACAGCTGATATA +
Preference number: 4 (lower is better)
Translates to: DQSQASVQTLQCQGVCPSKHRSV*ITTADI
Trigger: TATATCAGCTGTGGTGATGCACACACTGCGGTGCTT...ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCCGGATGAGTTGGCTTaGTTGTGTCACTTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: NHRPVFRLFSARECVQVIPDELA*LCHLVH
Trigger: ATGGACCAAGTGACACAAGCAAGCCAACTCATCCGG...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR GCA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGCCGGATGAGTTGGCTTaGTTGTGTCACTTGGTCCAT +
Preference number: 4 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWPDELA*LCHLVH
Trigger: ATGGACCAAGTGACACAAGCAAGCCAACTCATCCGG...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGGGCGCTGCAGCTCCCTaGAGTCGGCGCCCCAACAGA +
Preference number: 4 (lower is better)
Translates to: FLMVTPYVNERLTHSQLEGAAAP*SRRPNR
Trigger: TCTGTTGGGGCGCCGACTCCAGGGAGCTGCAGCGCC...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCCACGAGAGGACCCTGTaGTTGGTCAGCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: SPASVLCEILHPLTIIIIHERTL*LVSSSR
Trigger: TCTGCTGCTGCTGACCAACCACAGGGTCCTCTCGTG...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGCTTGTTGCTTTGCACTaGGACATTACGCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWLVALH*DITPTE
Trigger: CTCAGTGGGCGTAATGTCCCAGTGCAAAGCAACAAG...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTAACACTTTCCCGTCCTaGGTAAGCACCGCAGTGTGT +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCNTFPS*VSTAVC
Trigger: ACACACTGCGGTGCTTACCCAGGACGGGAAAGTGTT...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGGCCTCCGGATGAGTTaGCTTGCTTGTGTCACTTGG +
Preference number: 4 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWGLRMS*LACVTW
Trigger: CCAAGTGACACAAGCAAGCCAACTCATCCGGAGGCC...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CCA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGAATTCGGCTTATTTCTaGCAGGGTTTTCCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWNSAYF*QGFPGS
Trigger: GCTCCCGGGAAAACCCTGCCAGAAATAAGCCGAATT...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCAATTCGGCTTATTTCTaGCAGGGTTTTCCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: NHRPVFRLFSARECVQVINSAYF*QGFPGS
Trigger: GCTCCCGGGAAAACCCTGCCAGAAATAAGCCGAATT...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CCA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGTCTTGGTGTGGAGAATaGCATGGAAGAGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWSWCGE*HGRALS
Trigger: GCTCAGAGCTCTTCCATGCCATTCTCCACACCAAGA...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTGTACATTCCACAGGGTaGGAGTGGGCTAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCVHSTG*EWARAS
Trigger: ACTTGCTCTAGCCCACTCCCACCCTGTGGAATGTAC...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGCCAGGGGCGCAGCCCTaGCCCCATGTCAACTCTCGC +
Preference number: 4 (lower is better)
Translates to: FLMVTPYVNERLTHSQLEPGAQP*PHVNSR
Trigger: GCGAGAGTTGACATGGGGCCAGGGCTGCGCCCCTGG...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGTTCCGTCGGTCCCGCTaGGACAGGCTCCCGAACGCT +
Preference number: 4 (lower is better)
Translates to: FLMVTPYVNERLTHSQLEFRRSR*DRLPNA
Trigger: AGCGTTCGGGAGCCTGTCGCAGCGGGACCGACGGAA...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACACAGCCAGGGAGTaGTCCTTCCCGCAGCTCACG +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTHTARE*SFPQLT
Trigger: CGTGAGCTGCGGGAAGGAGCACTCCCTGGCTGTGTG...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGAGAACCAGCTCCCCATaGGAAGACCCTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWRTSSP*EDPSFV
Trigger: CACAAAGGAAGGGTCTTCGCATGGGGAGCTGGTTCT...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCTGTATGCCTCTTGCATaGAGCCTATCACGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: NHRPVFRLFSARECVQVICMPLA*SLSRPV
Trigger: TACAGGACGTGATAGGCTGCATGCAAGAGGCATACA...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGTTTCTGTATGCCTCTTaGATGCAGCCTATCACGTCC +
Preference number: 4 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWFLYAS*MQPITS
Trigger: GGACGTGATAGGCTGCATGCAAGAGGCATACAGAAA...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTGTTCAGACTCTTCAGTaGCAGGGAGTGTGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCVQTLQ*QGVCPS
Trigger: ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAAC...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCAAGACCCTTCCTTTGTaGCACACAGCCAGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: SPASVLCEILHPLTIIIIKTLPL*HTAREC
Trigger: GCACTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTT...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp GACCAATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTTCTTTCCACAAGTTGTaGACCTCTCTTCTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: DQSQASVQTLQCQGVCPSSFHKL*TSLLRS
Trigger: ACTCCTGAGAAGAGAGGTCCACAACTTGTGGAAAGA...ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATTGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTGTGTGGAGAATGGCATaGAAGAGCTCTGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCVWRMA*KSSEQI
Trigger: GATCTGCTCAGAGCTCTTCCATGCCATTCTCCACAC...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp CATGGAAGAGCTCTGAGCAGATCATCCTCGAGACACGTAGTTATCATGGAAGAAAGGGTTTCCAATGCCTaGATTGGTTCTGGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HGRALSRSSSRHVVIMEERVSNA*IGSGSS
Trigger: GGAGCTGCCAGAACCAATTCAGGCATTGGAAACCCT...TTCTTCCATGATAACTACGTGTCTCGAGGATGATCTGCTCAGAGCTCTTCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR TCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTCCAAAAGATACCACCTaGCCAGTGGTGTGCACATAT +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCPKDTT*PVVCTY
Trigger: ATATGTGCACACCACTGGTCAGGTGGTATCTTTTGG...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR TCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCTCCCCAACCGAGGACTaGGTTCTTTTAAATCTTCCA +
Preference number: 4 (lower is better)
Translates to: NHRPVFRLFSARECVQVISPTED*VLLNLP
Trigger: TGGAAGATTTAAAAGAACTCAGTCCTCGGTTGGGGA...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCGGTGATCTCTTTCACTaGAAGTTTCAGGACAGCGAA +
Preference number: 4 (lower is better)
Translates to: NHRPVFRLFSARECVQVIGDLFH*KFQDSE
Trigger: TTCGCTGTCCTGAAACTTTCAGTGAAAGAGATCACC...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCAGATTTTGCACCCTTTaGCCATCATCATCATCTCCC +
Preference number: 4 (lower is better)
Translates to: NHRPVFRLFSARECVQVIRFCTL*PSSSSP
Trigger: GGGAGATGATGATGATGGTCAAAGGGTGCAAAATCT...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp GACCAATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTGAGGCTGATGTGGTTTaGTACCTTATGCAAATGAAG +
Preference number: 4 (lower is better)
Translates to: DQSQASVQTLQCQGVCPSEADVV*YLMQMK
Trigger: CTTCATTTGCATAAGGTATCAAACCACATCAGCCTC...ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp CCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCGTGAAGCAGCAAAAGTaGAAGTACATTCCACAGGGT +
Preference number: 4 (lower is better)
Translates to: PVFRLFSARECVQVILRSVKQQK*KYIPQG
Trigger: ACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCAC...GGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCGTGAAGCAGCAAAAGTaGAAGTACATTCCACAGGGT +
Preference number: 4 (lower is better)
Translates to: NHRPVFRLFSARECVQVIVKQQK*KYIPQG
Trigger: ACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCAC...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp CATGGAAGAGCTCTGAGCAGATCATCCTCGAGACACGTAGTTATCATGGAAGAAAGAACCAGCTCCCCATaGGAAGACCCTTCCTTTGTG +
Preference number: 4 (lower is better)
Translates to: HGRALSRSSSRHVVIMEERTSSP*EDPSFV
Trigger: CACAAAGGAAGGGTCTTCGCATGGGGAGCTGGTTCT...TTCTTCCATGATAACTACGTGTCTCGAGGATGATCTGCTCAGAGCTCTTCCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR GCA 90 bp CTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACCTGAGAGAGGCTTGTTaGTTTGCACTGGGACATTAC +
Preference number: 4 (lower is better)
Translates to: LFSARECVQVILRSLSLYLREAC*FALGHY
Trigger: GTAATGTCCCAGTGCAAAGCAACAAGCCTCTCTCAG...GTACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp CTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACAGTGGTGTGCACATATaGCAGGGTGTGATAACTTCC +
Preference number: 4 (lower is better)
Translates to: LFSARECVQVILRSLSLYSGVHI*QGVITS
Trigger: GGAAGTTATCACACCCTGGCATATGTGCACACCACT...GTACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR GCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTTGTATGCCTCTTGCATaGAGCCTATCACGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCCMPLA*SLSRPV
Trigger: TACAGGACGTGATAGGCTGCATGCAAGAGGCATACA...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp GACCAATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTGATGGCTACTTGAAGTaGTTCCTCCATTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: DQSQASVQTLQCQGVCPSDGYLK*FLHSFH
Trigger: ATGGAAAGAATGGAGGAAGCACTTCAAGTAGCCATC...ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATTGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp AACATAGTCTCTCTTGTTGGTTTGGTCCACAGGTATGGAGATCCCATTTGGAATCACGAGAGGACCCTGTaGTTGGTCAGCAGCAGCAGA +
Preference number: 4 (lower is better)
Translates to: NIVSLVGLVHRYGDPIWNHERTL*LVSSSR
Trigger: TCTGCTGCTGCTGACCAACCACAGGGTCCTCTCGTG...ATTCCAAATGGGATCTCCATACCTGTGGACCAAACCAACAAGAGAGACTATGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR CCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGTGCCTGAATTGGTTCTaGCAGCTCCCCGCGCTGCGC +
Preference number: 4 (lower is better)
Translates to: FLMVTPYVNERLTHSQLECLNWF*QLPALR
Trigger: GCGCAGCGCGGGGAGCTGCCAGAACCAATTCAGGCA...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCAAGACCCTTCCTTTGTaGCACACAGCCAGGGAGTGC +
Preference number: 4 (lower is better)
Translates to: SVLCEILHPLTIIIISPFKTLPL*HTAREC
Trigger: GCACTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTT...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGTGTGGAGAATGGCATaGAAGAGCTCTGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWVWRMA*KSSEQI
Trigger: GATCTGCTCAGAGCTCTTCCATGCCATTCTCCACAC...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCGCTGCTTTAAGCATCTaGATCAGCGGATTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: NHRPVFRLFSARECVQVIAALSI*ISGFRE
Trigger: TTCTCTGAATCCGCTGATCCAGATGCTTAAAGCAGC...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CCA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGGCTGCTTTAAGCATCTaGATCAGCGGATTCAGAGAA +
Preference number: 4 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWAALSI*ISGFRE
Trigger: TTCTCTGAATCCGCTGATCCAGATGCTTAAAGCAGC...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTTCTGCAGGTATCAGGTaGTTATCCCGAAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCSAGIR*LSRKSC
Trigger: ACAGCTCTTTCGGGATAACCACCTGATACCTGCAGA...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000273960.7
CDS-3UTR CCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTGCCAGAGTGCAGGTCTaGCCCATGGCCAATCAGAGG +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTARVQV*PMANQR
Trigger: CCTCTGATTGGCCATGGGCCAGACCTGCACTCTGGC...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCGTACATTCCACAGGGTaGGAGTGGGCTAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: SPASVLCEILHPLTIIIIVHSTG*EWARAS
Trigger: ACTTGCTCTAGCCCACTCCCACCCTGTGGAATGTAC...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp CCCGAAAGAGCTGTCTTCCTCTATCTATATAAAAGTTTAATAAGTTGGAGAGTTCCAGGGGCGCAGCCCTaGCCCCATGTCAACTCTCGC +
Preference number: 4 (lower is better)
Translates to: PERAVFLYLYKSLISWRVPGAQP*PHVNSR
Trigger: GCGAGAGTTGACATGGGGCCAGGGCTGCGCCCCTGG...AACTCTCCAACTTATTAAACTTTTATATAGATAGAGGAAGACAGCTCTTTCGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR TCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTGTCAGGGCCTCCGGATaGGTTGGCTTGCTTGTGTCA +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTVRASG*VGLLVS
Trigger: TGACACAAGCAAGCCAACTCATCCGGAGGCCCTGAC...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR TCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTAGATTTTGCACCCTTTaGCCATCATCATCATCTCCC +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCRFCTL*PSSSSP
Trigger: GGGAGATGATGATGATGGTCAAAGGGTGCAAAATCT...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCGAGGCTGATGTGGTTTaGTACCTTATGCAAATGAAG +
Preference number: 4 (lower is better)
Translates to: NHRPVFRLFSARECVQVIEADVV*YLMQMK
Trigger: CTTCATTTGCATAAGGTATCAAACCACATCAGCCTC...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp CTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACTGGCCAATCAGAGGCTaGTGTGGTTTGATACCTTAT +
Preference number: 4 (lower is better)
Translates to: LFSARECVQVILRSLSLYWPIRG*CGLIPY
Trigger: ATAAGGTATCAAACCACATCAGCCTCTGATTGGCCA...GTACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp CTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACATGAATGTCCTGGAATaGACCAATCATTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LFSARECVQVILRSLSLYMNVLE*TNHWPE
Trigger: CTCTGGCCAATGATTGGTTCATTCCAGGACATTCAT...GTACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp GACCAATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTAAAATGTGTTTGACTTaGACATCCACGAAGTCTTCC +
Preference number: 4 (lower is better)
Translates to: DQSQASVQTLQCQGVCPSKMCLT*TSTKSS
Trigger: GGAAGACTTCGTGGATGTTCAAGTCAAACACATTTT...ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR TCA 90 bp CTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACGTATGCTTTCTTTTCTaGCATCAGGTGGTTATCCCG +
Preference number: 4 (lower is better)
Translates to: LFSARECVQVILRSLSLYVCFLF*HQVVIP
Trigger: CGGGATAACCACCTGATGTCAGAAAAGAAAGCATAC...GTACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380265.9
CDS-3UTR GCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGAAGCACCGCAGTGTGTaGATCACCACAGCTGATATA +
Preference number: 4 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWKHRSV*ITTADI
Trigger: TATATCAGCTGTGGTGATGCACACACTGCGGTGCTT...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGAGTGGTGTGCACATATaGCAGGGTGTGATAACTTCC +
Preference number: 4 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWSGVHI*QGVITS
Trigger: GGAAGTTATCACACCCTGGCATATGTGCACACCACT...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR GCA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGTGCTATCCATTTTTCTaGCATGGACTGGCTAATTCG +
Preference number: 4 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWCYPFF*HGLANS
Trigger: CGAATTAGCCAGTCCATGGCAGAAAAATGGATAGCA...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR GCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCTCATCTAGAACTTCTTaGAAACTCTTCCCCAACCGA +
Preference number: 4 (lower is better)
Translates to: NHRPVFRLFSARECVQVISSRTS*KLFPNR
Trigger: TCGGTTGGGGAAGAGTTTGCAAGAAGTTCTAGATGA...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCGATGGCTACTTGAAGTaGTTCCTCCATTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: NHRPVFRLFSARECVQVIDGYLK*FLHSFH
Trigger: ATGGAAAGAATGGAGGAAGCACTTCAAGTAGCCATC...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp CTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACTCTTTCCACAAGTTGTaGACCTCTCTTCTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: LFSARECVQVILRSLSLYSFHKL*TSLLRS
Trigger: ACTCCTGAGAAGAGAGGTCCACAACTTGTGGAAAGA...GTACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCATACCACCTGACCAGTaGTGTGCACATATGCCAGGG +
Preference number: 4 (lower is better)
Translates to: SVLCEILHPLTIIIISPFIPPDQ*CAHMPG
Trigger: CCCTGGCATATGTGCACACCACTGGTCAGGTGGTAT...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CCA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCTTGGTGTGGAGAATaGCATGGAAGAGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: SPASVLCEILHPLTIIIISWCGE*HGRALS
Trigger: GCTCAGAGCTCTTCCATGCCATTCTCCACACCAAGA...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTTCTCTCTTGTTGGTTTaGTCCACAGGTATGGAGATC +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCSLLLV*STGMEI
Trigger: GATCTCCATACCTGTGGACCAAACCAACAAGAGAGA...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTCAGCCAATCCAAGACTaGTGTGGTTTGACTCCTTAT +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCQPIQD*CGLTPY
Trigger: ATAAGGAGTCAAACCACACCAGTCTTGGATTGGCTG...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp CTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACCAGCCAATCCAAGACTaGTGTGGTTTGACTCCTTAT +
Preference number: 4 (lower is better)
Translates to: LFSARECVQVILRSLSLYQPIQD*CGLTPY
Trigger: ATAAGGAGTCAAACCACACCAGTCTTGGATTGGCTG...GTACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCGTACATTCCACAGGGTaGGAGTGGGCTAGAGCAAGT +
Preference number: 4 (lower is better)
Translates to: SVLCEILHPLTIIIISPFVHSTG*EWARAS
Trigger: ACTTGCTCTAGCCCACTCCCACCCTGTGGAATGTAC...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCCGAACGCTGGTGACTaGGTGCGCGATGATTTCCTG +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTPNAGD*VRDDFL
Trigger: CAGGAAATCATCGCGCACCCAGTCACCAGCGTTCGG...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGTGCATCACCACAGCTaGTATAAACCACACCTAGAT +
Preference number: 4 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWVHHHS*YKPHLD
Trigger: ATCTAGGTGTGGTTTATATCAGCTGTGGTGATGCAC...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCAGCAAAAATGTGTTTaGCTTGAACATCCACGAAGT +
Preference number: 4 (lower is better)
Translates to: NHRPVFRLFSARECVQVIQQKCV*LEHPRS
Trigger: ACTTCGTGGATGTTCAAGTCAAACACATTTTTGCTG...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGTCCCCAACCGAGGACTaGGTTCTTTTAAATCTTCCA +
Preference number: 4 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWSPTED*VLLNLP
Trigger: TGGAAGATTTAAAAGAACTCAGTCCTCGGTTGGGGA...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp CCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTGTATAGTAGGATGTaGTTTTTGGTATCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: PVFRLFSARECVQVILRSLYSRM*FLVSLL
Trigger: GAGCAAGGATACCAAAAATCACATCCTACTATACAG...GGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGGTGATCTCTTTCACTaGAAGTTTCAGGACAGCGAA +
Preference number: 4 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWGDLFH*KFQDSE
Trigger: TTCGCTGTCCTGAAACTTTCAGTGAAAGAGATCACC...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp GACCAATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTGTTATTGATGTTGGGTaGTCTCTTTCACTGAAAGTT +
Preference number: 4 (lower is better)
Translates to: DQSQASVQTLQCQGVCPSVIDVG*SLSLKV
Trigger: AACTTTCAGTGAAAGAGATCACCCAACATCAATAAC...ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATTGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCCTGTGTGAGCATGGGTaGGACAAATCCTCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: SPASVLCEILHPLTIIIILCEHG*DKSSVV
Trigger: AACAACAGAGGATTTGTCTCACCCATGCTCACACAG...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTGGAGCACAAGGCAGTaGAGCAGCAAAAGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: SPASVLCEILHPLTIIIIWSTRQ*SSKSES
Trigger: ACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCA...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTGCGCGATGATTTCCTaGATATCAAGAGACTCACCC +
Preference number: 4 (lower is better)
Translates to: SPASVLCEILHPLTIIIICAMIS*ISRDSP
Trigger: GGGTGAGTCTCTTGATATTCAGGAAATCATCGCGCA...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp CCCGAAAGAGCTGTCTTCCTCTATCTATATAAAAGTTTAATAAGTTGGAGAGTTGGCCCAGCTGACCCCTaGTGTTGTCTCCGCACGAGA +
Preference number: 4 (lower is better)
Translates to: PERAVFLYLYKSLISWRVGPADP*CCLRTR
Trigger: TCTCGTGCGGAGACAACAGCAGGGGTCAGCTGGGCC...AACTCTCCAACTTATTAAACTTTTATATAGATAGAGGAAGACAGCTCTTTCGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR GCA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTTTCTGTATGCCTCTTaGATGCAGCCTATCACGTCC +
Preference number: 4 (lower is better)
Translates to: SPASVLCEILHPLTIIIIFLYAS*MQPITS
Trigger: GGACGTGATAGGCTGCATGCAAGAGGCATACAGAAA...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCGTTCAGACTCTTCAGTaGCAGGGAGTGTGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: SVLCEILHPLTIIIISPFVQTLQ*QGVCPS
Trigger: ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAAC...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTCTAAGTCCACATCAATaGAAGTCGTTTCTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCLSPHQ*KSFLQF
Trigger: GAACTGGAGAAACGACTTCCATTGATGTGGACTTAG...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGTCTCTCTTGTTGGTTTaGTCCACAGGTATGGAGATC +
Preference number: 4 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWSLLLV*STGMEI
Trigger: GATCTCCATACCTGTGGACCAAACCAACAAGAGAGA...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
3UTR CAA 72 bp GTACCCTATTCTCCTGCCTCAGTCTTGTGTGAGATTTaGCACCCTTTGACCATCATCATCATCTCCCCATTC +
Preference number: 4 (lower is better)
Translates to: VPYSPASVLCEI*HPLTIIIISPF
Trigger: GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGAATAGGGTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCTTCAGTGCACCGACTaGGAGAGGCTTGTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTLQCTD*ERLVAL
Trigger: CAAAGCAACAAGCCTCTCTCAGTCGGTGCACTGAAG...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTGCTTTAACATTACAGTaGTCCTGTTCGGTTTTAGTC +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCALTLQ*SCSVLV
Trigger: GACTAAAACCGAACAGGATCACTGTAATGTTAAAGC...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR TCA 90 bp CCAATGTCATCAGCAGCATCATCTAGAACTTCTTGCAAACTCTTCCCCAACCGATCCCCAACCGAGGACTaGGTTCTTTTAAATCTTCCA +
Preference number: 4 (lower is better)
Translates to: PMSSAASSRTSCKLFPNRSPTED*VLLNLP
Trigger: TGGAAGATTTAAAAGAACTCAGTCCTCGGTTGGGGA...TCGGTTGGGGAAGAGTTTGCAAGAAGTTCTAGATGATGCTGCTGATGACATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR TCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTCTGTATAGTAGGATGTaGTTTTTGGTATCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCLYSRM*FLVSLL
Trigger: GAGCAAGGATACCAAAAATCACATCCTACTATACAG...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCAGGGAGAGAATATTATaGCAAGTTATTGATGTTGGG +
Preference number: 4 (lower is better)
Translates to: NHRPVFRLFSARECVQVIRERIL*QVIDVG
Trigger: CCCAACATCAATAACTTGTCATAATATTCTCTCCCT...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCAGATTTTGCACCCTTTaGCCATCATCATCATCTCCC +
Preference number: 4 (lower is better)
Translates to: SPASVLCEILHPLTIIIIRFCTL*PSSSSP
Trigger: GGGAGATGATGATGATGGTCAAAGGGTGCAAAATCT...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCTGCCTCAGTCTTGTGTaGGATTTTGCACCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: SVLCEILHPLTIIIISPFCLSLV*DFAPFD
Trigger: GTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCA...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTGGCCAATCAGAGGCTaGTGTGGTTTGATACCTTAT +
Preference number: 4 (lower is better)
Translates to: SPASVLCEILHPLTIIIIWPIRG*CGLIPY
Trigger: ATAAGGTATCAAACCACATCAGCCTCTGATTGGCCA...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCATGAATGTCCTGGAATaGACCAATCATTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SPASVLCEILHPLTIIIIMNVLE*TNHWPE
Trigger: CTCTGGCCAATGATTGGTTCATTCCAGGACATTCAT...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCTGGAGCACAAGGCAGTaGAGCAGCAAAAGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: SVLCEILHPLTIIIISPFWSTRQ*SSKSES
Trigger: ACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCA...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGTCATCTAGAACTTCTTaGAAACTCTTCCCCAACCGA +
Preference number: 4 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWSSRTS*KLFPNR
Trigger: TCGGTTGGGGAAGAGTTTGCAAGAAGTTCTAGATGA...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTTTTCCATTTTCTGTATaGCTCTTGCATGCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCFPFSV*LLHAAY
Trigger: ATAGGCTGCATGCAAGAGGCATACAGAAAATGGAAA...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGTTCCAATGCCTGAATTaGTTCTGGCAGCTCCCCGCG +
Preference number: 4 (lower is better)
Translates to: FLMVTPYVNERLTHSQLEFQCLN*FWQLPA
Trigger: CGCGGGGAGCTGCCAGAACCAATTCAGGCATTGGAA...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp CCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCGAGTTGTCACAAAGTTaGCATATGTTCCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: PVFRLFSARECVQVILRSELSQS*HMFQQK
Trigger: TTTTTGCTGGAACATATGCCAACTTTGTGACAACTC...GGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCGAACATTCCATATTCTaGCTTGGTCATCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: NHRPVFRLFSARECVQVIEHSIF*LGHLFK
Trigger: TTTGAAGAGATGACCAAGCCAGAATATGGAATGTTC...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTGATTGTCTCCAAATGTaGACACTTTCCCGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTDCLQM*TLSRPG
Trigger: CCCAGGACGGGAAAGTGTTCACATTTGGAGACAATC...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTACAGTGGAAGAACTCTaGACTAACCCCTCCAGACTC +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTTVEEL*TNPSRL
Trigger: GAGTCTGGAGGGGTTAGTTCAGAGTTCTTCCACTGT...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGCTGTATAGTAGGATGTaGTTTTTGGTATCCTTGCTC +
Preference number: 4 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWLYSRM*FLVSLL
Trigger: GAGCAAGGATACCAAAAATCACATCCTACTATACAG...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTGTTATTGATGTTGGGTaGTCTCTTTCACTGAAAGTT +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCVIDVG*SLSLKV
Trigger: AACTTTCAGTGAAAGAGATCACCCAACATCAATAAC...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp CTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACAGGGAGAGAATATTATaGCAAGTTATTGATGTTGGG +
Preference number: 4 (lower is better)
Translates to: LFSARECVQVILRSLSLYRERIL*QVIDVG
Trigger: CCCAACATCAATAACTTGTCATAATATTCTCTCCCT...GTACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp AACATAGTCTCTCTTGTTGGTTTGGTCCACAGGTATGGAGATCCCATTTGGAATTGCCTCAGTCTTGTGTaGGATTTTGCACCCTTTGAC +
Preference number: 4 (lower is better)
Translates to: NIVSLVGLVHRYGDPIWNCLSLV*DFAPFD
Trigger: GTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCA...ATTCCAAATGGGATCTCCATACCTGTGGACCAAACCAACAAGAGAGACTATGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR GCA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTGCTATCCATTTTTCTaGCATGGACTGGCTAATTCG +
Preference number: 4 (lower is better)
Translates to: SPASVLCEILHPLTIIIICYPFF*HGLANS
Trigger: CGAATTAGCCAGTCCATGGCAGAAAAATGGATAGCA...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR GCA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCCTGAGAGATGATGGCTaGTTTAAGCATCTGGATCAG +
Preference number: 4 (lower is better)
Translates to: SVLCEILHPLTIIIISPFLRDDG*FKHLDQ
Trigger: CTGATCCAGATGCTTAAAGCAGCCATCATCTCTCAG...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR GCA 90 bp CATGGAAGAGCTCTGAGCAGATCATCCTCGAGACACGTAGTTATCATGGAAGAATCATCTAGAACTTCTTaGAAACTCTTCCCCAACCGA +
Preference number: 4 (lower is better)
Translates to: HGRALSRSSSRHVVIMEESSRTS*KLFPNR
Trigger: TCGGTTGGGGAAGAGTTTGCAAGAAGTTCTAGATGA...TTCTTCCATGATAACTACGTGTCTCGAGGATGATCTGCTCAGAGCTCTTCCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR GCA 90 bp AACATAGTCTCTCTTGTTGGTTTGGTCCACAGGTATGGAGATCCCATTTGGAATTGTATGCCTCTTGCATaGAGCCTATCACGTCCTGTA +
Preference number: 4 (lower is better)
Translates to: NIVSLVGLVHRYGDPIWNCMPLA*SLSRPV
Trigger: TACAGGACGTGATAGGCTGCATGCAAGAGGCATACA...ATTCCAAATGGGATCTCCATACCTGTGGACCAAACCAACAAGAGAGACTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR CCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCTTGTTGCTTTGCACTaGGACATTACGCCCACTGAG +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTLVALH*DITPTE
Trigger: CTCAGTGGGCGTAATGTCCCAGTGCAAAGCAACAAG...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCTCTTTCCACAAGTTGTaGACCTCTCTTCTCAGGAGT +
Preference number: 4 (lower is better)
Translates to: SVLCEILHPLTIIIISPFSFHKL*TSLLRS
Trigger: ACTCCTGAGAAGAGAGGTCCACAACTTGTGGAAAGA...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGATACCACCTGACCAGTaGTGTGCACATATGCCAGGG +
Preference number: 4 (lower is better)
Translates to: FLMVTPYVNERLTHSQLEIPPDQ*CAHMPG
Trigger: CCCTGGCATATGTGCACACCACTGGTCAGGTGGTAT...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGTTTTCTGCCATGGACTaGCTAATTCGGCTTATTTCT +
Preference number: 4 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWFSAMD*LIRLIS
Trigger: AGAAATAAGCCGAATTAGCCAGTCCATGGCAGAAAA...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CCA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCCTAAGTCCACATCAATaGAAGTCGTTTCTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: SPASVLCEILHPLTIIIILSPHQ*KSFLQF
Trigger: GAACTGGAGAAACGACTTCCATTGATGTGGACTTAG...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTGTGTGGAGAATGGCATaGAAGAGCTCTGAGCAGATC +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTVWRMA*KSSEQI
Trigger: GATCTGCTCAGAGCTCTTCCATGCCATTCTCCACAC...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGGATTGTCTCCAAATGTaGACACTTTCCCGTCCTGGG +
Preference number: 4 (lower is better)
Translates to: FLMVTPYVNERLTHSQLEDCLQM*TLSRPG
Trigger: CCCAGGACGGGAAAGTGTTCACATTTGGAGACAATC...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCCAAAAGATACCACCTaGCCAGTGGTGTGCACATAT +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTPKDTT*PVVCTY
Trigger: ATATGTGCACACCACTGGTCAGGTGGTATCTTTTGG...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR TCA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCGCTTTAACATTACAGTaGTCCTGTTCGGTTTTAGTC +
Preference number: 4 (lower is better)
Translates to: SPASVLCEILHPLTIIIIALTLQ*SCSVLV
Trigger: GACTAAAACCGAACAGGATCACTGTAATGTTAAAGC...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR TCA 90 bp AACATAGTCTCTCTTGTTGGTTTGGTCCACAGGTATGGAGATCCCATTTGGAATGGTGATCTCTTTCACTaGAAGTTTCAGGACAGCGAA +
Preference number: 4 (lower is better)
Translates to: NIVSLVGLVHRYGDPIWNGDLFH*KFQDSE
Trigger: TTCGCTGTCCTGAAACTTTCAGTGAAAGAGATCACC...ATTCCAAATGGGATCTCCATACCTGTGGACCAAACCAACAAGAGAGACTATGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR TCA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCGAGGCTGATGTGGTTTaGTACCTTATGCAAATGAAG +
Preference number: 4 (lower is better)
Translates to: SVLCEILHPLTIIIISPFEADVV*YLMQMK
Trigger: CTTCATTTGCATAAGGTATCAAACCACATCAGCCTC...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTTGGAGCACAAGGCAGTaGAGCAGCAAAAGTGAAAGT +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTWSTRQ*SSKSES
Trigger: ACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCA...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTAAGCACCGCAGTGTGTaGATCACCACAGCTGATATA +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTKHRSV*ITTADI
Trigger: TATATCAGCTGTGGTGATGCACACACTGCGGTGCTT...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACTTCTTCTTTTCACTaGTATCCATTTTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCTSSFH*YPFFCH
Trigger: ATGGCAGAAAAATGGATAGCAGTGAAAAGAAGAAGT...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR GCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGAGGACTGGGGGTTTCTaGAGGTATCAGGTGGTTATC +
Preference number: 4 (lower is better)
Translates to: FLMVTPYVNERLTHSQLERTGGF*RYQVVI
Trigger: GATAACCACCTGATACCTGCAGAAACCCCCAGTCCT...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000273960.7
CDS-3UTR GCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGGTTCAGACTCTTCAGTaGCAGGGAGTGTGTCCAAGT +
Preference number: 4 (lower is better)
Translates to: FLMVTPYVNERLTHSQLEVQTLQ*QGVCPS
Trigger: ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAAC...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCCTTGCTTGTGTCACTTaGTCCATGACCAAAAGATAC +
Preference number: 4 (lower is better)
Translates to: SVLCEILHPLTIIIISPFLACVT*SMTKRY
Trigger: GTATCTTTTGGTCATGGACCAAGTGACACAAGCAAG...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAACATTCCATATTCTaGCTTGGTCATCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWEHSIF*LGHLFK
Trigger: TTTGAAGAGATGACCAAGCCAGAATATGGAATGTTC...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTAAGTCAACATCATTTTaGTCCCAGTGTATAGAAAAG +
Preference number: 4 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCKSTSF*SQCIEK
Trigger: CTTTTCTATACACTGGGACCAAAATGATGTTGACTT...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTTTGGTCCACAGGTATaGAGATCCCATTTGGAATTA +
Preference number: 4 (lower is better)
Translates to: SPASVLCEILHPLTIIIIFGPQV*RSHLEL
Trigger: TAATTCCAAATGGGATCTCCATACCTGTGGACCAAA...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp ATTTCTAAGTCCACATCAATGGAAGTCGTTTCTCCAGTTCCTCTTTTCTTTAAACTTCAGTGCACCGACTaGGAGAGGCTTGTTGCTTTG +
Preference number: 4 (lower is better)
Translates to: ISKSTSMEVVSPVPLFFKLQCTD*ERLVAL
Trigger: CAAAGCAACAAGCCTCTCTCAGTCGGTGCACTGAAG...TTTAAAGAAAAGAGGAACTGGAGAAACGACTTCCATTGATGTGGACTTAGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR TCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTGTGCATCACCACAGCTaGTATAAACCACACCTAGAT +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTVHHHS*YKPHLD
Trigger: ATCTAGGTGTGGTTTATATCAGCTGTGGTGATGCAC...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp CCATATTCTGGCTTGGTCATCTCTTCAAACATACAGTGGAAGAACTCTGAACTAGTGCATCACCACAGCTaGTATAAACCACACCTAGAT +
Preference number: 4 (lower is better)
Translates to: PYSGLVISSNIQWKNSELVHHHS*YKPHLD
Trigger: ATCTAGGTGTGGTTTATATCAGCTGTGGTGATGCAC...TAGTTCAGAGTTCTTCCACTGTATGTTTGAAGAGATGACCAAGCCAGAATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR TCA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCCAGCAAAAATGTGTTTaGCTTGAACATCCACGAAGT +
Preference number: 4 (lower is better)
Translates to: SVLCEILHPLTIIIISPFQQKCV*LEHPRS
Trigger: ACTTCGTGGATGTTCAAGTCAAACACATTTTTGCTG...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCAGGGAGAGAATATTATaGCAAGTTATTGATGTTGGG +
Preference number: 4 (lower is better)
Translates to: SPASVLCEILHPLTIIIIRERIL*QVIDVG
Trigger: CCCAACATCAATAACTTGTCATAATATTCTCTCCCT...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR TCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGTGCGCGATGATTTCCTaGATATCAAGAGACTCACCC +
Preference number: 4 (lower is better)
Translates to: FLMVTPYVNERLTHSQLECAMIS*ISRDSP
Trigger: GGGTGAGTCTCTTGATATTCAGGAAATCATCGCGCA...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGCTGAGAGAGGCTTGTTaGTTTGCACTGGGACATTAC +
Preference number: 4 (lower is better)
Translates to: FLMVTPYVNERLTHSQLELREAC*FALGHY
Trigger: GTAATGTCCCAGTGCAAAGCAACAAGCCTCTCTCAG...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGACTTCTTCTTTTCACTaGTATCCATTTTTCTGCCAT +
Preference number: 4 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWTSSFH*YPFFCH
Trigger: ATGGCAGAAAAATGGATAGCAGTGAAAAGAAGAAGT...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR GCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCTGAGAGATGATGGCTaGTTTAAGCATCTGGATCAG +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTLRDDG*FKHLDQ
Trigger: CTGATCCAGATGCTTAAAGCAGCCATCATCTCTCAG...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR GCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGTTTCTGTATGCCTCTTaGATGCAGCCTATCACGTCC +
Preference number: 4 (lower is better)
Translates to: FLMVTPYVNERLTHSQLEFLYAS*MQPITS
Trigger: GGACGTGATAGGCTGCATGCAAGAGGCATACAGAAA...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCTTTTCTGCCATGGACTaGCTAATTCGGCTTATTTCT +
Preference number: 4 (lower is better)
Translates to: SVLCEILHPLTIIIISPFFSAMD*LIRLIS
Trigger: AGAAATAAGCCGAATTAGCCAGTCCATGGCAGAAAA...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CCA 90 bp CCATATTCTGGCTTGGTCATCTCTTCAAACATACAGTGGAAGAACTCTGAACTACAGCCAATCCAAGACTaGTGTGGTTTGACTCCTTAT +
Preference number: 4 (lower is better)
Translates to: PYSGLVISSNIQWKNSELQPIQD*CGLTPY
Trigger: ATAAGGAGTCAAACCACACCAGTCTTGGATTGGCTG...TAGTTCAGAGTTCTTCCACTGTATGTTTGAAGAGATGACCAAGCCAGAATATGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR TCA 90 bp ATTTCTAAGTCCACATCAATGGAAGTCGTTTCTCCAGTTCCTCTTTTCTTTAAAACAGTGGAAGAACTCTaGACTAACCCCTCCAGACTC +
Preference number: 4 (lower is better)
Translates to: ISKSTSMEVVSPVPLFFKTVEEL*TNPSRL
Trigger: GAGTCTGGAGGGGTTAGTTCAGAGTTCTTCCACTGT...TTTAAAGAAAAGAGGAACTGGAGAAACGACTTCCATTGATGTGGACTTAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR TCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGATGAATGTCCTGGAATaGACCAATCATTGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: FLMVTPYVNERLTHSQLEMNVLE*TNHWPE
Trigger: CTCTGGCCAATGATTGGTTCATTCCAGGACATTCAT...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp ATTTCTAAGTCCACATCAATGGAAGTCGTTTCTCCAGTTCCTCTTTTCTTTAAATCTTGGTGTGGAGAATaGCATGGAAGAGCTCTGAGC +
Preference number: 4 (lower is better)
Translates to: ISKSTSMEVVSPVPLFFKSWCGE*HGRALS
Trigger: GCTCAGAGCTCTTCCATGCCATTCTCCACACCAAGA...TTTAAAGAAAAGAGGAACTGGAGAAACGACTTCCATTGATGTGGACTTAGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR TCA 90 bp CCCGAAAGAGCTGTCTTCCTCTATCTATATAAAAGTTTAATAAGTTGGAGAGTTCTGTGTGAGCATGGGTaGGACAAATCCTCTGTTGTT +
Preference number: 4 (lower is better)
Translates to: PERAVFLYLYKSLISWRVLCEHG*DKSSVV
Trigger: AACAACAGAGGATTTGTCTCACCCATGCTCACACAG...AACTCTCCAACTTATTAAACTTTTATATAGATAGAGGAAGACAGCTCTTTCGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR GCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTTTTCCATTTTCTGTATaGCTCTTGCATGCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTFPFSV*LLHAAY
Trigger: ATAGGCTGCATGCAAGAGGCATACAGAAAATGGAAA...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGCTTGCTTGTGTCACTTaGTCCATGACCAAAAGATAC +
Preference number: 4 (lower is better)
Translates to: FLMVTPYVNERLTHSQLELACVT*SMTKRY
Trigger: GTATCTTTTGGTCATGGACCAAGTGACACAAGCAAG...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CCA 90 bp CCCGAAAGAGCTGTCTTCCTCTATCTATATAAAAGTTTAATAAGTTGGAGAGTTTCTGCAGGTATCAGGTaGTTATCCCGAAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: PERAVFLYLYKSLISWRVSAGIR*LSRKSC
Trigger: ACAGCTCTTTCGGGATAACCACCTGATACCTGCAGA...AACTCTCCAACTTATTAAACTTTTATATAGATAGAGGAAGACAGCTCTTTCGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR CCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGTTTTCTGACATCAGGTaGTTATCCCGAAAGAGCTGT +
Preference number: 4 (lower is better)
Translates to: FLMVTPYVNERLTHSQLEFSDIR*LSRKSC
Trigger: ACAGCTCTTTCGGGATAACCACCTGATGTCAGAAAA...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380265.9
CDS-3UTR TCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTAAAATGTGTTTGACTTaGACATCCACGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTKMCLT*TSTKSS
Trigger: TGAAGACTTCGTGGATGTTCAAGTCAAACACATTTT...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR TCA 90 bp CCCGAAAGAGCTGTCTTCCTCTATCTATATAAAAGTTTAATAAGTTGGAGAGTTGTGAAGCAGCAAAAGTaGAAGTACATTCCACAGGGT +
Preference number: 4 (lower is better)
Translates to: PERAVFLYLYKSLISWRVVKQQK*KYIPQG
Trigger: ACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCAC...AACTCTCCAACTTATTAAACTTTTATATAGATAGAGGAAGACAGCTCTTTCGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR CCA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTGAGTTGTCACAAAGTTaGCATATGTTCCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTELSQS*HMFQQK
Trigger: TTTTTGCTGGAACATATGCCAACTTTGTGACAACTC...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CCA 90 bp GTAGAAATGTCTAAGTATCTCCTTCTCACAGACTCTATAAAATCCTCTCTGAAATCTCTCTTGTTGGTTTaGTCCACAGGTATGGAGATC +
Preference number: 4 (lower is better)
Translates to: VEMSKYLLLTDSIKSSLKSLLLV*STGMEI
Trigger: GATCTCCATACCTGTGGACCAAACCAACAAGAGAGA...TTTCAGAGAGGATTTTATAGAGTCTGTGAGAAGGAGATACTTAGACATTTCTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR TCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGAAAATGTGTTTGACTTaGACATCCACGAAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: FLMVTPYVNERLTHSQLEKMCLT*TSTKSS
Trigger: TGAAGACTTCGTGGATGTTCAAGTCAAACACATTTT...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR GCA 90 bp CCCGAAAGAGCTGTCTTCCTCTATCTATATAAAAGTTTAATAAGTTGGAGAGTTGATGGCTACTTGAAGTaGTTCCTCCATTCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: PERAVFLYLYKSLISWRVDGYLK*FLHSFH
Trigger: ATGGAAAGAATGGAGGAAGCACTTCAAGTAGCCATC...AACTCTCCAACTTATTAAACTTTTATATAGATAGAGGAAGACAGCTCTTTCGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR CCA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGGAGTTGTCACAAAGTTaGCATATGTTCCAGCAAAAA +
Preference number: 4 (lower is better)
Translates to: FLMVTPYVNERLTHSQLEELSQS*HMFQQK
Trigger: TTTTTGCTGGAACATATGCCAACTTTGTGACAACTC...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR GCA 90 bp GTAGAAATGTCTAAGTATCTCCTTCTCACAGACTCTATAAAATCCTCTCTGAAATTTCCATTTTCTGTATaGCTCTTGCATGCAGCCTAT +
Preference number: 4 (lower is better)
Translates to: VEMSKYLLLTDSIKSSLKFPFSV*LLHAAY
Trigger: ATAGGCTGCATGCAAGAGGCATACAGAAAATGGAAA...TTTCAGAGAGGATTTTATAGAGTCTGTGAGAAGGAGATACTTAGACATTTCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR CCA 90 bp GTAGAAATGTCTAAGTATCTCCTTCTCACAGACTCTATAAAATCCTCTCTGAAATTTGGTCCACAGGTATaGAGATCCCATTTGGAATTA +
Preference number: 4 (lower is better)
Translates to: VEMSKYLLLTDSIKSSLKFGPQV*RSHLEL
Trigger: TAATTCCAAATGGGATCTCCATACCTGTGGACCAAA...TTTCAGAGAGGATTTTATAGAGTCTGTGAGAAGGAGATACTTAGACATTTCTAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR CCA 90 bp GTAGAAATGTCTAAGTATCTCCTTCTCACAGACTCTATAAAATCCTCTCTGAAAGAACATTCCATATTCTaGCTTGGTCATCTCTTCAAA +
Preference number: 4 (lower is better)
Translates to: VEMSKYLLLTDSIKSSLKEHSIF*LGHLFK
Trigger: TTTGAAGAGATGACCAAGCCAGAATATGGAATGTTC...TTTCAGAGAGGATTTTATAGAGTCTGTGAGAAGGAGATACTTAGACATTTCTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR CCA 90 bp CCCGAAAGAGCTGTCTTCCTCTATCTATATAAAAGTTTAATAAGTTGGAGAGTTAAGTCAACATCATTTTaGTCCCAGTGTATAGAAAAG +
Preference number: 4 (lower is better)
Translates to: PERAVFLYLYKSLISWRVKSTSF*SQCIEK
Trigger: CTTTTCTATACACTGGGACCAAAATGATGTTGACTT...AACTCTCCAACTTATTAAACTTTTATATAGATAGAGGAAGACAGCTCTTTCGGG
34% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS GCA 90 bp TCGGCGCCCCAACAGAAGTACATCCCGCTTCTGCGCCCTGTCGCCTaGTCCGGATTCCGTCGGTCCCGCTGCGACAGGCTCCCGAACGCT +
Preference number: 5 (lower is better)
Translates to: SAPQQKYIPLLRPVA*SGFRRSRCDRLPNA
Trigger: AGCGTTCGGGAGCCTGTCGCAGCGGGACCGACGGAATCCGGAGCAGGCGACAGGGCGCAGAAGCGGGATGTACTTCTGTTGGGGCGCCGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS GCA 90 bp GCAGCTCCCTGGAGTCGGCGCCCCAACAGAAGTACATCCCGCTTCTaGGCCCTGTCGCCTGCTCCGGATTCCGTCGGTCCCGCTGCGACA +
Preference number: 5 (lower is better)
Translates to: AAPWSRRPNRSTSRF*ALSPAPDSVGPAAT
Trigger: TGTCGCAGCGGGACCGACGGAATCCGGAGCAGGCGACAGGGCGCAGAAGCGGGATGTACTTCTGTTGGGGCGCCGACTCCAGGGAGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS GCA 90 bp CCGCTTCTGCGCCCTGTCGCCTGCTCCGGATTCCGTCGGTCCCGCTaGGACAGGCTCCCGAACGCTGGTGACTGGGTGCGCGATGATTTC +
Preference number: 5 (lower is better)
Translates to: PLLRPVACSGFRRSR*DRLPNAGDWVRDDF
Trigger: GAAATCATCGCGCACCCAGTCACCAGCGTTCGGGAGCCTGTCGCAGCGGGACCGACGGAATCCGGAGCAGGCGACAGGGCGCAGAAGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273960.7
ENST00000380265.9
CDS TCA 90 bp GCGACAGGCTCCCGAACGCTGGTGACTGGGTGCGCGATGATTTCCTaGATATCAAGAGACTCACCCTGTCTTCAACCCGCCCCAGGGGCG +
Preference number: 5 (lower is better)
Translates to: ATGSRTLVTGCAMIS*ISRDSPCLQPAPGA
Trigger: CGCCCCTGGGGCGGGTTGAAGACAGGGTGAGTCTCTTGATATTCAGGAAATCATCGCGCACCCAGTCACCAGCGTTCGGGAGCCTGTCGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000273960.7
ENST00000380265.9
CDS CCA 90 bp AGCTGCCCTTCAGAACCAGCTCCCCATGCGAAGACCCTTCCTTTGTaGCACACAGCCAGGGAGTGCTCCTTCCCGCAGCTCACGAGATCA +
Preference number: 5 (lower is better)
Translates to: SCPSEPAPHAKTLPL*HTARECSFPQLTRS
Trigger: TGATCTCGTGAGCTGCGGGAAGGAGCACTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTTCGCATGGGGAGCTGGTTCTGAAGGGCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
ENST00000502870.1
ENST00000504905.5
ENST00000506714.5
CDS-3UTR CAA 90 bp GCTGCCCTTCAGAACCAGCTCCCCATGCGAAGACCCTTCCTTTGTGGCACACAGGAGAGGACCCTGTGGTaGGTCAGCAGCAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: AALQNQLPMRRPFLCGTQERTLW*VSSSRE
Trigger: CTCTCTGCTGCTGCTGACCAACCACAGGGTCCTCTC...CTGTGTGCCACAAAGGAAGGGTCTTCGCATGGGGAGCTGGTTCTGAAGGGCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504905.5
CDS-3UTR CAA 90 bp AACCAGCTCCCCATGCGAAGACCCTTCCTTTGTGGCACACAGCCAGGGAGTGCTGCGAAGACCCTTCCTTaGTGGCACACAGCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: NQLPMRRPFLCGTQPGSAAKTLP*WHTARE
Trigger: CTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTTCGC...AGCACTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTTCGCATGGGGAGCTGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504905.5
CDS GCA 90 bp GGCTTGTTGCTTTGCACTGGGACATTACGCCCACTGAGGGCCAGCTaGCCGGCACTGTTACTTCCCCAGCCAAACGAAGTCCCACAGAGA +
Preference number: 5 (lower is better)
Translates to: GLLLCTGTLRPLRAS*PALLLPQPNEVPQR
Trigger: TCTCTGTGGGACTTCGTTTGGCTGGGGAAGTAACAGTGCCGGGCAGCTGGCCCTCAGTGGGCGTAATGTCCCAGTGCAAAGCAACAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
ENST00000506714.5
CDS CCA 90 bp GGATTCCGTCGGTCCCGCTGCGACAGGCTCCCGAACGCTGGTGACTaGGTGCGCGATGATTTCCTGAATATCAAGAGACTCACCCTGTCT +
Preference number: 5 (lower is better)
Translates to: GFRRSRCDRLPNAGD*VRDDFLNIKRLTLS
Trigger: AGACAGGGTGAGTCTCTTGATATTCAGGAAATCATCGCGCACCCAGTCACCAGCGTTCGGGAGCCTGTCGCAGCGGGACCGACGGAATCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273960.7
ENST00000380265.9
CDS GCA 90 bp GCTCCCCATGCGAAGACCCTTCCTTTGTGGCACACAGCCAGGGAGTaGTCCTTCCCGCAGCTCACGAGATCAACAATTAGGGTTTCCAAT +
Preference number: 5 (lower is better)
Translates to: APHAKTLPLWHTARE*SFPQLTRSTIRVSN
Trigger: ATTGGAAACCCTAATTGTTGATCTCGTGAGCTGCGGGAAGGAGCACTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTTCGCATGGGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
ENST00000502870.1
ENST00000504905.5
ENST00000506714.5
CDS-3UTR CAA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGGAGAGGACCCTGTGGTaGGTCAGCAGCAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWERTLW*VSSSRE
Trigger: CTCTCTGCTGCTGCTGACCAACCACAGGGTCCTCTC...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGGCGAAGACCCTTCCTTaGTGGCACACAGCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWAKTLP*WHTARE
Trigger: CTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTTCGC...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp GACCAATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTTTTCCAATGCCTGAATaGGTTCTGGCAGCTCCCCGC +
Preference number: 5 (lower is better)
Translates to: DQSQASVQTLQCQGVCPSFPMPE*VLAAPR
Trigger: GCGGGGAGCTGCCAGAACCAATTCAGGCATTGGAAA...ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp GACCCTTCCTTTGTGGCACACAGCCAGGGAGTGCTCCTTCCCGCAGCTCACGAGGTGAAACTTATTTCCTaGAATTCTCCAATCCCCAGC +
Preference number: 5 (lower is better)
Translates to: DPSFVAHSQGVLLPAAHEVKLIS*NSPIPS
Trigger: GCTGGGGATTGGAGAATTCAAGGAAATAAGTTTCAC...CTCGTGAGCTGCGGGAAGGAGCACTCCCTGGCTGTGTGCCACAAAGGAAGGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504905.5
CDS TCA 90 bp GCTACACACACCCCTGCACACTCACACACATGGCAATCCTCCTACTaGAGGAGGTGCCACTGGGAAATTCCCTCCAGGACATGTCAGAAA +
Preference number: 5 (lower is better)
Translates to: ATHTPAHSHTWQSSY*RRCHWEIPSRTCQK
Trigger: TTTCTGACATGTCCTGGAGGGAATTTCCCAGTGGCACCTCCTTCAGTAGGAGGATTGCCATGTGTGTGAGTGTGCAGGGGTGTGTGTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506714.5
CDS-3UTR CAA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGCGAAGACCCTTCCTTaGTGGCACACAGCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWAKTLP*WHTARE
Trigger: CTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTTCGC...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp CAGCTGCCCTTCAGAACCAGCTCCCCATGCGAAGACCCTTCCTTTGTGGCACACACACTTGGCTATCTTTaGATAATGCCAGGGAGTGGT +
Preference number: 5 (lower is better)
Translates to: QLPFRTSSPCEDPSFVAHTLGYL*IMPGSG
Trigger: ACCACTCCCTGGCATTATCAAAAGATAGCCAAGTGT...GTGTGCCACAAAGGAAGGGTCTTCGCATGGGGAGCTGGTTCTGAAGGGCAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000504905.5
CDS-3UTR CAA 90 bp CCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCGAGAGGCTTGTTGCTTaGCACTGGGACATTACGCCC +
Preference number: 5 (lower is better)
Translates to: PVFRLFSARECVQVILRSERLVA*HWDITP
Trigger: GGGCGTAATGTCCCAGTGCAAAGCAACAAGCCTCTC...GGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp CCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCCGACTGAGAGAGGCTaGTTGCTTTGCACTGGGACA +
Preference number: 5 (lower is better)
Translates to: PVFRLFSARECVQVILRSPTERG*LLCTGT
Trigger: TGTCCCAGTGCAAAGCAACAAGCCTCTCTCAGTCGG...GGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS CCA 90 bp GTTCTCTGTCAGGGCCTCCGGATGAGTTGGCTTGCTTGTGTCACTTaGTCCATGACCAAAAGATACCACCTGACCAGTGGTGTGCACATA +
Preference number: 5 (lower is better)
Translates to: VLCQGLRMSWLACVT*SMTKRYHLTSGVHI
Trigger: TATGTGCACACCACTGGTCAGGTGGTATCTTTTGGTCATGGACCAAGTGACACAAGCAAGCCAACTCATCCGGAGGCCCTGACAGAGAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000380265.9
ENST00000515365.1
CDS-3UTR CAA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCGCGAAGACCCTTCCTTaGTGGCACACAGCCAGGGAG +
Preference number: 5 (lower is better)
Translates to: SPASVLCEILHPLTIIIIAKTLP*WHTARE
Trigger: CTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTTCGC...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp CTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACGAGAGGCTTGTTGCTTaGCACTGGGACATTACGCCC +
Preference number: 5 (lower is better)
Translates to: LFSARECVQVILRSLSLYERLVA*HWDITP
Trigger: GGGCGTAATGTCCCAGTGCAAAGCAACAAGCCTCTC...GTACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGGGCCTCCGGATGAGTaGGCTTGCTTGTGTCACTTG +
Preference number: 5 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWGPPDE*ACLCHL
Trigger: CAAGTGACACAAGCAAGCCAACTCATCCGGAGGCCC...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CAA 90 bp GACCAATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTTTCTCAGGTTTAGGCTaGGCAGGAAACCACATGCAG +
Preference number: 5 (lower is better)
Translates to: DQSQASVQTLQCQGVCPSFSGLG*AGNHMQ
Trigger: CTGCATGTGGTTTCCTGCCAAGCCTAAACCTGAGAA...ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATTGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS CCA 90 bp CAGGCAGCTAATGTCAAAGTTCTCTGTCAGGGCCTCCGGATGAGTTaGCTTGCTTGTGTCACTTGGTCCATGACCAAAAGATACCACCTG +
Preference number: 5 (lower is better)
Translates to: QAANVKVLCQGLRMS*LACVTWSMTKRYHL
Trigger: CAGGTGGTATCTTTTGGTCATGGACCAAGTGACACAAGCAAGCCAACTCATCCGGAGGCCCTGACAGAGAACTTTGACATTAGCTGCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000380265.9
ENST00000515365.1
CDS-3UTR CAA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCGAGAGGACCCTGTGGTaGGTCAGCAGCAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: SVLCEILHPLTIIIISPFERTLW*VSSSRE
Trigger: CTCTCTGCTGCTGCTGACCAACCACAGGGTCCTCTC...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGAGGCTTGTTGCTTaGCACTGGGACATTACGCCC +
Preference number: 5 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWERLVA*HWDITP
Trigger: GGGCGTAATGTCCCAGTGCAAAGCAACAAGCCTCTC...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp CCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCGATGAGTTGGCTTGCTaGTGTCACTTGGTCCATGAC +
Preference number: 5 (lower is better)
Translates to: PVFRLFSARECVQVILRSDELAC*CHLVHD
Trigger: GTCATGGACCAAGTGACACAAGCAAGCCAACTCATC...GGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CAA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCTTCTCAGGTTTAGGCTaGGCAGGAAACCACATGCAG +
Preference number: 5 (lower is better)
Translates to: NHRPVFRLFSARECVQVIFSGLG*AGNHMQ
Trigger: CTGCATGTGGTTTCCTGCCAAGCCTAAACCTGAGAA...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp GACCAATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTTTTTCTGTATGCCTCTaGCATGCAGCCTATCACGTC +
Preference number: 5 (lower is better)
Translates to: DQSQASVQTLQCQGVCPSFSVCL*HAAYHV
Trigger: GACGTGATAGGCTGCATGCAAGAGGCATACAGAAAA...ACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATTGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp CCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCTCTCCTGCCTCAGTCTaGTGTGAGATTTTGCACCCT +
Preference number: 5 (lower is better)
Translates to: PVFRLFSARECVQVILRSSPASV*CEILHP
Trigger: AGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA...GGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp CCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCACTGAGAGAGGCTTGTaGCTTTGCACTGGGACATTA +
Preference number: 5 (lower is better)
Translates to: PVFRLFSARECVQVILRSTERGL*LCTGTL
Trigger: TAATGTCCCAGTGCAAAGCAACAAGCCTCTCTCAGT...GGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCCCGACTGAGAGAGGCTaGTTGCTTTGCACTGGGACA +
Preference number: 5 (lower is better)
Translates to: SPASVLCEILHPLTIIIIPTERG*LLCTGT
Trigger: TGTCCCAGTGCAAAGCAACAAGCCTCTCTCAGTCGG...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCAGCTGTCCAGAGCGATaGTCTCCAAATGTGAACACT +
Preference number: 5 (lower is better)
Translates to: NHRPVFRLFSARECVQVISCPER*SPNVNT
Trigger: AGTGTTCACATTTGGAGACAATCGCTCTGGACAGCT...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCGGGCCTCCGGATGAGTaGGCTTGCTTGTGTCACTTG +
Preference number: 5 (lower is better)
Translates to: SVLCEILHPLTIIIISPFGPPDE*ACLCHL
Trigger: CAAGTGACACAAGCAAGCCAACTCATCCGGAGGCCC...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CAA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGGTCTCTCTTGTTGGTTaGGTCCACAGGTATGGAGAT +
Preference number: 5 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWVSLVG*VHRYGD
Trigger: ATCTCCATACCTGTGGACCAAACCAACAAGAGAGAC...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp CCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCTTTTCTGTATGCCTCTaGCATGCAGCCTATCACGTC +
Preference number: 5 (lower is better)
Translates to: PVFRLFSARECVQVILRSFSVCL*HAAYHV
Trigger: GACGTGATAGGCTGCATGCAAGAGGCATACAGAAAA...GGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTTCTCCTGCCTCAGTCTaGTGTGAGATTTTGCACCCT +
Preference number: 5 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCSPASV*CEILHP
Trigger: AGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS CCA 90 bp TGCTATCCATTTTTCTGCCATGGACTGGCTAATTCGGCTTATTTCTaGCAGGGTTTTCCCGGGAGCACGTGTGGAACTAGTATCCTGATG +
Preference number: 5 (lower is better)
Translates to: CYPFFCHGLANSAYF*QGFPGSTCGTSILM
Trigger: CATCAGGATACTAGTTCCACACGTGCTCCCGGGAAAACCCTGCCAGAAATAAGCCGAATTAGCCAGTCCATGGCAGAAAAATGGATAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000380265.9
ENST00000515365.1
CDS-3UTR CAA 90 bp CCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCACACTTGGCTATCTTTaGATAATGCCAGGGAGTGGT +
Preference number: 5 (lower is better)
Translates to: PVFRLFSARECVQVILRSTLGYL*IMPGSG
Trigger: ACCACTCCCTGGCATTATCAAAAGATAGCCAAGTGT...GGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCCCGACTGAGAGAGGCTaGTTGCTTTGCACTGGGACA +
Preference number: 5 (lower is better)
Translates to: SVLCEILHPLTIIIISPFPTERG*LLCTGT
Trigger: TGTCCCAGTGCAAAGCAACAAGCCTCTCTCAGTCGG...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTAGCTGTCCAGAGCGATaGTCTCCAAATGTGAACACT +
Preference number: 5 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCSCPER*SPNVNT
Trigger: AGTGTTCACATTTGGAGACAATCGCTCTGGACAGCT...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTTTTTCTGTATGCCTCTaGCATGCAGCCTATCACGTC +
Preference number: 5 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCFSVCL*HAAYHV
Trigger: GACGTGATAGGCTGCATGCAAGAGGCATACAGAAAA...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGGAGAGGACCCTGTGGTaGGTCAGCAGCAGCAGAGAG +
Preference number: 5 (lower is better)
Translates to: FLMVTPYVNERLTHSQLEERTLW*VSSSRE
Trigger: CTCTCTGCTGCTGCTGACCAACCACAGGGTCCTCTC...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACACTTGGCTATCTTTaGATAATGCCAGGGAGTGGT +
Preference number: 5 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCTLGYL*IMPGSG
Trigger: ACCACTCCCTGGCATTATCAAAAGATAGCCAAGTGT...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp CTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACGCTTGCTTGTGTCACTaGGTCCATGACCAAAAGATA +
Preference number: 5 (lower is better)
Translates to: LFSARECVQVILRSLSLYACLCH*VHDQKI
Trigger: TATCTTTTGGTCATGGACCAAGTGACACAAGCAAGC...GTACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CAA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGTCTCTCTTGTTGGTTaGGTCCACAGGTATGGAGAT +
Preference number: 5 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWVSLVG*VHRYGD
Trigger: ATCTCCATACCTGTGGACCAAACCAACAAGAGAGAC...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTGAGATTTTGCACCCTTaGACCATCATCATCATCTCC +
Preference number: 5 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCEILHP*TIIIIS
Trigger: GGAGATGATGATGATGGTCAAAGGGTGCAAAATCTC...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp GACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTGTCTTGTGTGAGATTTaGCACCCTTTGACCATCATC +
Preference number: 5 (lower is better)
Translates to: DSSVPGSVSKSSLDPYLCVLCEI*HPLTII
Trigger: GATGATGGTCAAAGGGTGCAAAATCTCACACAAGAC...ACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp CCAATGTCATCAGCAGCATCATCTAGAACTTCTTGCAAACTCTTCCCCAACCGATCTCCTGCCTCAGTCTaGTGTGAGATTTTGCACCCT +
Preference number: 5 (lower is better)
Translates to: PMSSAASSRTSCKLFPNRSPASV*CEILHP
Trigger: AGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA...TCGGTTGGGGAAGAGTTTGCAAGAAGTTCTAGATGATGCTGCTGATGACATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS TCA 90 bp CTCCATGGCTGTGAGACAAAGAACCTTGGGTGTCACCCCAGACAATaGGGCCACTTCAATGGCTTCATTCTAAACAAGACTGTACCTTTT +
Preference number: 5 (lower is better)
Translates to: LHGCETKNLGCHPRQ*GHFNGFILNKTVPF
Trigger: AAAAGGTACAGTCTTGTTTAGAATGAAGCCATTGAAGTGGCCTCATTGTCTGGGGTGACACCCAAGGTTCTTTGTCTCACAGCCATGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506842.1
CDS CCA 90 bp TGCTTGTGTCACTTGGTCCATGACCAAAAGATACCACCTGACCAGTaGTGTGCACATATGCCAGGGTGTGATAACTTCCACAATCTATCT +
Preference number: 5 (lower is better)
Translates to: CLCHLVHDQKIPPDQ*CAHMPGCDNFHNLS
Trigger: AGATAGATTGTGGAAGTTATCACACCCTGGCATATGTGCACACCACTGGTCAGGTGGTATCTTTTGGTCATGGACCAAGTGACACAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000380265.9
ENST00000515365.1
CDS-3UTR CAA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCACTGAGAGAGGCTTGTaGCTTTGCACTGGGACATTA +
Preference number: 5 (lower is better)
Translates to: SPASVLCEILHPLTIIIITERGL*LCTGTL
Trigger: TAATGTCCCAGTGCAAAGCAACAAGCCTCTCTCAGT...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGCTTGCTTGTGTCACTaGGTCCATGACCAAAAGATA +
Preference number: 5 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWACLCH*VHDQKI
Trigger: TATCTTTTGGTCATGGACCAAGTGACACAAGCAAGC...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CAA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCGATGAGTTGGCTTGCTaGTGTCACTTGGTCCATGAC +
Preference number: 5 (lower is better)
Translates to: SVLCEILHPLTIIIISPFDELAC*CHLVHD
Trigger: GTCATGGACCAAGTGACACAAGCAAGCCAACTCATC...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CAA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGTCAACCACTAATACTTaGCAGAAGTCAGTAGCTTCA +
Preference number: 5 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWSTTNT*QKSVAS
Trigger: TGAAGCTACTGACTTCTGCAAAGTATTAGTGGTTGA...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS GCA 90 bp CCTCTCTGTAGCAGAGAGCTATTCTCTTTTCGCCTATTAAGTTTCTaGTCTATACCTCACCCTTTGTGTGTGTCCATGTCCTTGATCTCC +
Preference number: 5 (lower is better)
Translates to: PLCSRELFSFRLLSF*SIPHPLCVSMSLIS
Trigger: GGAGATCAAGGACATGGACACACACAAAGGGTGAGGTATAGAGCAGAAACTTAATAGGCGAAAAGAGAATAGCTCTCTGCTACAGAGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506842.1
CDS-3UTR CAA 90 bp CATGGAAGAGCTCTGAGCAGATCATCCTCGAGACACGTAGTTATCATGGAAGAAACACTTGGCTATCTTTaGATAATGCCAGGGAGTGGT +
Preference number: 5 (lower is better)
Translates to: HGRALSRSSSRHVVIMEETLGYL*IMPGSG
Trigger: ACCACTCCCTGGCATTATCAAAAGATAGCCAAGTGT...TTCTTCCATGATAACTACGTGTCTCGAGGATGATCTGCTCAGAGCTCTTCCATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR CAA 90 bp GCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGGAGTGGAAAAATGTGTTTGACTaGAACATCCACGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: AQGSEAAKVKVHSTGWEWKNVFD*NIHEVF
Trigger: GAAGACTTCGTGGATGTTCAAGTCAAACACATTTTT...CCACTCCCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp CCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCAAAAATGTGTTTGACTaGAACATCCACGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: PVFRLFSARECVQVILRSKNVFD*NIHEVF
Trigger: GAAGACTTCGTGGATGTTCAAGTCAAACACATTTTT...GGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp CTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCCTTAGATCCCTATCTCTGTACTCAACCACTAATACTTaGCAGAAGTCAGTAGCTTCA +
Preference number: 5 (lower is better)
Translates to: LFSARECVQVILRSLSLYSTTNT*QKSVAS
Trigger: TGAAGCTACTGACTTCTGCAAAGTATTAGTGGTTGA...GTACAGAGATAGGGATCTAAGGATGACTTGGACACACTCCCTGGCACTGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp AATCACAGGCCAGTGTTCAGACTCTTCAGTGCCAGGGAGTGTGTCCAAGTCATCGTATGGAGATCCCATTaGGAATTAAGTCAACATCAT +
Preference number: 5 (lower is better)
Translates to: NHRPVFRLFSARECVQVIVWRSH*ELSQHH
Trigger: ATGATGTTGACTTAATTCCAAATGGGATCTCCATAC...GATGACTTGGACACACTCCCTGGCACTGAAGAGTCTGAACACTGGCCTGTGATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp CCAATGTCATCAGCAGCATCATCTAGAACTTCTTGCAAACTCTTCCCCAACCGAGTGAAACTTATTTCCTaGAATTCTCCAATCCCCAGC +
Preference number: 5 (lower is better)
Translates to: PMSSAASSRTSCKLFPNRVKLIS*NSPIPS
Trigger: GCTGGGGATTGGAGAATTCAAGGAAATAAGTTTCAC...TCGGTTGGGGAAGAGTTTGCAAGAAGTTCTAGATGATGCTGCTGATGACATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR CAA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCGTGAAACTTATTTCCTaGAATTCTCCAATCCCCAGC +
Preference number: 5 (lower is better)
Translates to: SPASVLCEILHPLTIIIIVKLIS*NSPIPS
Trigger: GCTGGGGATTGGAGAATTCAAGGAAATAAGTTTCAC...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp AACATAGTCTCTCTTGTTGGTTTGGTCCACAGGTATGGAGATCCCATTTGGAATACTGAGAGAGGCTTGTaGCTTTGCACTGGGACATTA +
Preference number: 5 (lower is better)
Translates to: NIVSLVGLVHRYGDPIWNTERGL*LCTGTL
Trigger: TAATGTCCCAGTGCAAAGCAACAAGCCTCTCTCAGT...ATTCCAAATGGGATCTCCATACCTGTGGACCAAACCAACAAGAGAGACTATGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR CAA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGTCAACCACTAATACTTaGCAGAAGTCAGTAGCTTCA +
Preference number: 5 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWSTTNT*QKSVAS
Trigger: TGAAGCTACTGACTTCTGCAAAGTATTAGTGGTTGA...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS TCA 90 bp TCATCATTAATTTTATTAAGCAATAAACTTGAGTTGGGGACTCGGTaGTGTGACCCTTGCAACACAGGACAGCTGAGACGCTACATGCCA +
Preference number: 5 (lower is better)
Translates to: SSLILLSNKLELGTR*CDPCNTGQLRRYMP
Trigger: TGGCATGTAGCGTCTCAGCTGTCCTGTGTTGCAAGGGTCACATCACCGAGTCCCCAACTCAAGTTTATTGCTTAATAAAATTAATGATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506714.5
CDS-3UTR CAA 90 bp TCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCTCCCCATTCGTGAAACTTATTTCCTaGAATTCTCCAATCCCCAGC +
Preference number: 5 (lower is better)
Translates to: SVLCEILHPLTIIIISPFVKLIS*NSPIPS
Trigger: GCTGGGGATTGGAGAATTCAAGGAAATAAGTTTCAC...GAATGGGGAGATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCAGTCGACAGTTAGCTTaGTTTACCTTATGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: SPASVLCEILHPLTIIIISRQLA*FTLCSS
Trigger: AGAACTGCATAAGGTAAACAAAGCTAACTGTCGACT...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CAA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGTTCTCAGGTTTAGGCTaGGCAGGAAACCACATGCAG +
Preference number: 5 (lower is better)
Translates to: FLMVTPYVNERLTHSQLEFSGLG*AGNHMQ
Trigger: CTGCATGTGGTTTCCTGCCAAGCCTAAACCTGAGAA...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTGTCTCTCTTGTTGGTTaGGTCCACAGGTATGGAGAT +
Preference number: 5 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTVSLVG*VHRYGD
Trigger: ATCTCCATACCTGTGGACCAAACCAACAAGAGAGAC...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGAATTTCACTGATGAGTaGTCACAAAGTTGGCATATG +
Preference number: 5 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWNFTDE*SQSWHM
Trigger: CATATGCCAACTTTGTGACAACTCATCAGTGAAATT...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR CAA 90 bp ATTGGAGCACAAGGCAGTGAAGCAGCAAAAGTGAAAGTACATTCCACAGGGTGGAGTCGACAGTTAGCTTaGTTTATTAGGACTTGCAAA +
Preference number: 5 (lower is better)
Translates to: IGAQGSEAAKVKVHSTGWSRQLA*FIRTCK
Trigger: TTTGCAAGTCCTAATAAACAAAGCTAACTGTCGACT...CCACCCTGTGGAATGTACTTTCACTTTTGCTGCTTCACTGCCTTGTGCTCCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS-3UTR CAA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGAGCTGTCCAGAGCGATaGTCTCCAAATGTGAACACT +
Preference number: 5 (lower is better)
Translates to: FLMVTPYVNERLTHSQLESCPER*SPNVNT
Trigger: AGTGTTCACATTTGGAGACAATCGCTCTGGACAGCT...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCAAAAATGTGTTTGACTaGAACATCCACGAAGTCTTC +
Preference number: 5 (lower is better)
Translates to: SPASVLCEILHPLTIIIIKNVFD*NIHEVF
Trigger: GAAGACTTCGTGGATGTTCAAGTCAAACACATTTTT...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp TCTCCTGCCTCAGTCTTGTGTGAGATTTTGCACCCTTTGACCATCATCATCATCGTATGGAGATCCCATTaGGAATTAAGTCAACATCAT +
Preference number: 5 (lower is better)
Translates to: SPASVLCEILHPLTIIIIVWRSH*ELSQHH
Trigger: ATGATGTTGACTTAATTCCAAATGGGATCTCCATAC...GATGATGATGATGGTCAAAGGGTGCAAAATCTCACACAAGACTGAGGCAGGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTGAGATTTTGCACCCTTaGACCATCATCATCATCTCC +
Preference number: 5 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTEILHP*TIIIIS
Trigger: GGAGATGATGATGATGGTCAAAGGGTGCAAAATCTC...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp TTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTCACAGCCAATTAGAGGAGATTTTGCACCCTTaGACCATCATCATCATCTCC +
Preference number: 5 (lower is better)
Translates to: FLMVTPYVNERLTHSQLEEILHP*TIIIIS
Trigger: GGAGATGATGATGATGGTCAAAGGGTGCAAAATCTC...CTCTAATTGGCTGTGAGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS-3UTR CAA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTAGTCGACAGTTAGCTTaGTTTACCTTATGCAGTTCT +
Preference number: 5 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTSRQLA*FTLCSS
Trigger: AGAACTGCATAAGGTAAACAAAGCTAACTGTCGACT...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264346.12
ENST00000380265.9
CDS-3UTR CAA 90 bp GTACCCTGTAGAGGTTTCTTGATGGTTACACCCTATGTAAATGAAAGACTGACTGTATGGAGATCCCATTaGGAATTAAGTCAACATCAT +
Preference number: 5 (lower is better)
Translates to: VPCRGFLMVTPYVNERLTVWRSH*ELSQHH
Trigger: ATGATGTTGACTTAATTCCAAATGGGATCTCCATAC...AGTCAGTCTTTCATTTACATAGGGTGTAACCATCAAGAAACCTCTACAGGGTAC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS CCA 90 bp TCTTATTTATTTTGCATTTACATATTTATGGTCCGGCCCTGCCTGTaGAGTCCAAATGCTATGAATGAGGGTAACTTTGTCTGTACTATT +
Preference number: 5 (lower is better)
Translates to: SYLFCIYIFMVRPCL*SPNAMNEGNFVCTI
Trigger: AATAGTACAGACAAAGTTACCCTCATTCATAGCATTTGGACTCCACAGGCAGGGCCGGACCATAAATATGTAAATGCAAAATAAATAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506714.5
CDS TCA 90 bp GATGAGTTGTCACAAAGTTGGCATATGTTCCAGCAAAAATGTGTTTaGCTTGAACATCCACGAAGTCTAAAAGAAAGTCATAAATCCATG +
Preference number: 5 (lower is better)
Translates to: DELSQSWHMFQQKCV*LEHPRSLKESHKSM
Trigger: CATGGATTTATGACTTTCTTTTAGACTTCGTGGATGTTCAAGTCAAACACATTTTTGCTGGAACATATGCCAACTTTGTGACAACTCATC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506714.5
CDS GCA 72 bp CGCCCTGTCGCCTGCTCCGGATTCCGTCGGTCCCGCTaGGACAGGCTCCCGAACGCTGGTGACTGGGTGCGC +
Preference number: 6 (lower is better)
Translates to: RPVACSGFRRSR*DRLPNAGDWVR
Trigger: GCGCACCCAGTCACCAGCGTTCGGGAGCCTGTCGCAGCGGGACCGACGGAATCCGGAGCAGGCGACAGGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273960.7
ENST00000380265.9
CDS CCA 72 bp GAGAGGACCCTGTGGTTGGTCAGCAGCAGCAGAGAGTaGCGCTCCCCGCTGGCCGCCTGCAGTAGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: ERTLWLVSSSRE*RSPLAACSSSA
Trigger: GGCTGAGCTACTGCAGGCGGCCAGCGGGGAGCGCCACTCTCTGCTGCTGCTGACCAACCACAGGGTCCTCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
ENST00000504905.5
CDS GCA 72 bp TGGAGTCGGCGCCCCAACAGAAGTACATCCCGCTTCTaGGCCCTGTCGCCTGCTCCGGATTCCGTCGGTCCC +
Preference number: 6 (lower is better)
Translates to: WSRRPNRSTSRF*ALSPAPDSVGP
Trigger: GGGACCGACGGAATCCGGAGCAGGCGACAGGGCGCAGAAGCGGGATGTACTTCTGTTGGGGCGCCGACTCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS GCA 72 bp CAACAGAAGTACATCCCGCTTCTGCGCCCTGTCGCCTaGTCCGGATTCCGTCGGTCCCGCTGCGACAGGCTC +
Preference number: 6 (lower is better)
Translates to: QQKYIPLLRPVA*SGFRRSRCDRL
Trigger: GAGCCTGTCGCAGCGGGACCGACGGAATCCGGAGCAGGCGACAGGGCGCAGAAGCGGGATGTACTTCTGTTG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
CDS TCA 72 bp GGACTCGGTGATGTGACCCTTGCAACACAGGACAGCTaGGACGCTACATGCCACCCCTGCTACACACACCCC +
Preference number: 6 (lower is better)
Translates to: GLGDVTLATQDS*DATCHPCYTHP
Trigger: GGGGTGTGTGTAGCAGGGGTGGCATGTAGCGTCTCAGCTGTCCTGTGTTGCAAGGGTCACATCACCGAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506714.5
CDS CCA 72 bp CGGTCCCGCTGCGACAGGCTCCCGAACGCTGGTGACTaGGTGCGCGATGATTTCCTGAATATCAAGAGACTC +
Preference number: 6 (lower is better)
Translates to: RSRCDRLPNAGD*VRDDFLNIKRL
Trigger: GAGTCTCTTGATATTCAGGAAATCATCGCGCACCCAGTCACCAGCGTTCGGGAGCCTGTCGCAGCGGGACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273960.7
ENST00000380265.9
CDS GCA 72 bp GCGAAGACCCTTCCTTTGTGGCACACAGCCAGGGAGTaGTCCTTCCCGCAGCTCACGAGATCAACAATTAGG +
Preference number: 6 (lower is better)
Translates to: AKTLPLWHTARE*SFPQLTRSTIR
Trigger: CCTAATTGTTGATCTCGTGAGCTGCGGGAAGGAGCACTCCCTGGCTGTGTGCCACAAAGGAAGGGTCTTCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
ENST00000502870.1
ENST00000504905.5
ENST00000506714.5
CDS CAA 90 bp CCTCTCTTCTCAGGAGTGGGGCTGTATCCCAGCTGTCCAGAGCGATaGTCTCCAAATGTGAACACTTTCCCGTCCTGGGTAAGCACCGCA +
Preference number: 6 (lower is better)
Translates to: PLFSGVGLYPSCPER*SPNVNTFPSWVSTA
Trigger: TGCGGTGCTTACCCAGGACGGGAAAGTGTTCACATTTGGAGACAATCGCTCTGGACAGCTGGGATACAGCCCCACTCCTGAGAAGAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
ENST00000506714.5
ENST00000515365.1
CDS TCA 72 bp TCCCGAACGCTGGTGACTGGGTGCGCGATGATTTCCTaGATATCAAGAGACTCACCCTGTCTTCAACCCGCC +
Preference number: 6 (lower is better)
Translates to: SRTLVTGCAMIS*ISRDSPCLQPA
Trigger: GGCGGGTTGAAGACAGGGTGAGTCTCTTGATATTCAGGAAATCATCGCGCACCCAGTCACCAGCGTTCGGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000273960.7
ENST00000380265.9
CDS CCA 72 bp CAGGGCCTCCGGATGAGTTGGCTTGCTTGTGTCACTTaGTCCATGACCAAAAGATACCACCTGACCAGTGGT +
Preference number: 6 (lower is better)
Translates to: QGLRMSWLACVT*SMTKRYHLTSG
Trigger: ACCACTGGTCAGGTGGTATCTTTTGGTCATGGACCAAGTGACACAAGCAAGCCAACTCATCCGGAGGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000380265.9
ENST00000515365.1
CDS CAA 72 bp TCAGGAGTGGGGCTGTATCCCAGCTGTCCAGAGCGATaGTCTCCAAATGTGAACACTTTCCCGTCCTGGGTA +
Preference number: 6 (lower is better)
Translates to: SGVGLYPSCPER*SPNVNTFPSWV
Trigger: TACCCAGGACGGGAAAGTGTTCACATTTGGAGACAATCGCTCTGGACAGCTGGGATACAGCCCCACTCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
ENST00000506714.5
ENST00000515365.1
CDS CAA 72 bp TCAGGGCCTCCGGATGAGTTGGCTTGCTTGTGTCACTaGGTCCATGACCAAAAGATACCACCTGACCAGTGG +
Preference number: 6 (lower is better)
Translates to: SGPPDELACLCH*VHDQKIPPDQW
Trigger: CCACTGGTCAGGTGGTATCTTTTGGTCATGGACCAAGTGACACAAGCAAGCCAACTCATCCGGAGGCCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000380265.9
ENST00000515365.1
CDS CAA 72 bp ACACCTAGATTCTTCAGTGCACCGACTGAGAGAGGCTaGTTGCTTTGCACTGGGACATTACGCCCACTGAGG +
Preference number: 6 (lower is better)
Translates to: TPRFFSAPTERG*LLCTGTLRPLR
Trigger: CCTCAGTGGGCGTAATGTCCCAGTGCAAAGCAACAAGCCTCTCTCAGTCGGTGCACTGAAGAATCTAGGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000264346.12
ENST00000273960.7
ENST00000380265.9
ENST00000506714.5
ENST00000515365.1
CDS CAA 90 bp AGTTCTCTGTCAGGGCCTCCGGATGAGTTGGCTTGCTTGTGTCACTaGGTCCATGACCAAAAGATACCACCTGACCAGTGGTGTGCACAT +
Preference number: 6 (lower is better)
Translates to: SSLSGPPDELACLCH*VHDQKIPPDQWCAH
Trigger: ATGTGCACACCACTGGTCAGGTGGTATCTTTTGGTCATGGACCAAGTGACACAAGCAAGCCAACTCATCCGGAGGCCCTGACAGAGAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000380265.9
ENST00000515365.1
CDS CAA 72 bp AGTTCTCTGTCAGGGCCTCCGGATGAGTTGGCTTGCTaGTGTCACTTGGTCCATGACCAAAAGATACCACCT +
Preference number: 6 (lower is better)
Translates to: SSLSGPPDELAC*CHLVHDQKIPP
Trigger: AGGTGGTATCTTTTGGTCATGGACCAAGTGACACAAGCAAGCCAACTCATCCGGAGGCCCTGACAGAGAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000380265.9
ENST00000515365.1
CDS GCA 72 bp CAAAGTTCTCTGTCAGGGCCTCCGGATGAGTTGGCTTaGTTGTGTCACTTGGTCCATGACCAAAAGATACCA +
Preference number: 6 (lower is better)
Translates to: QSSLSGPPDELA*LCHLVHDQKIP
Trigger: TGGTATCTTTTGGTCATGGACCAAGTGACACAAGCAAGCCAACTCATCCGGAGGCCCTGACAGAGAACTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000380265.9
ENST00000515365.1
CDS CCA 72 bp TTTTTCTGCCATGGACTGGCTAATTCGGCTTATTTCTaGCAGGGTTTTCCCGGGAGCACGTGTGGAACTAGT +
Preference number: 6 (lower is better)
Translates to: FFCHGLANSAYF*QGFPGSTCGTS
Trigger: ACTAGTTCCACACGTGCTCCCGGGAAAACCCTGCCAGAAATAAGCCGAATTAGCCAGTCCATGGCAGAAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000380265.9
ENST00000515365.1
CDS CAA 72 bp ATGTCCTTGATCTCCATGGCTGTGAGACAAAGAACCTaGGGTGTCACCCCAGACAATGAGGCCACTTCAATG +
Preference number: 6 (lower is better)
Translates to: MSLISMAVRQRT*GVTPDNEATSM
Trigger: CATTGAAGTGGCCTCATTGTCTGGGGTGACACCCAAGGTTCTTTGTCTCACAGCCATGGAGATCAAGGACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506842.1
CDS CCA 72 bp AATGTCAAAGTTCTCTGTCAGGGCCTCCGGATGAGTTaGCTTGCTTGTGTCACTTGGTCCATGACCAAAAGA +
Preference number: 6 (lower is better)
Translates to: NVKVLCQGLRMS*LACVTWSMTKR
Trigger: TCTTTTGGTCATGGACCAAGTGACACAAGCAAGCCAACTCATCCGGAGGCCCTGACAGAGAACTTTGACATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000380265.9
ENST00000515365.1
CDS CAA 72 bp TATAGTCTCCTAACTATCCCAACAGCACAGAAACCTTaGCCTCTGACCACATTCTGTGCCAGGGACTACAGA +
Preference number: 6 (lower is better)
Translates to: YSLLTIPTAQKP*PLTTFCARDYR
Trigger: TCTGTAGTCCCTGGCACAGAATGTGGTCAGAGGCAAAGGTTTCTGTGCTGTTGGGATAGTTAGGAGACTATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506714.5
CDS TCA 72 bp TGTGAGACAAAGAACCTTGGGTGTCACCCCAGACAATaGGGCCACTTCAATGGCTTCATTCTAAACAAGACT +
Preference number: 6 (lower is better)
Translates to: CETKNLGCHPRQ*GHFNGFILNKT
Trigger: AGTCTTGTTTAGAATGAAGCCATTGAAGTGGCCTCATTGTCTGGGGTGACACCCAAGGTTCTTTGTCTCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506842.1
CDS TCA 72 bp ATTTTATTAAGCAATAAACTTGAGTTGGGGACTCGGTaGTGTGACCCTTGCAACACAGGACAGCTGAGACGC +
Preference number: 6 (lower is better)
Translates to: ILLSNKLELGTR*CDPCNTGQLRR
Trigger: GCGTCTCAGCTGTCCTGTGTTGCAAGGGTCACATCACCGAGTCCCCAACTCAAGTTTATTGCTTAATAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000506714.5
CDS CAA 72 bp TTTCGCCTATTAAGTTTCTGCTCTATACCTCACCCTTaGTGTGTGTCCATGTCCTTGATCTCCATGGCTGTG +
Preference number: 6 (lower is better)
Translates to: FRLLSFCSIPHP*CVSMSLISMAV
Trigger: CACAGCCATGGAGATCAAGGACATGGACACACACAAAGGGTGAGGTATAGAGCAGAAACTTAATAGGCGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506842.1
CDS TCA 72 bp TTATGGTCCGGCCCTGCCTGTGGAGTCCAAATGCTATaGATGAGGGTAACTTTGTCTGTACTATTCACTTTT +
Preference number: 6 (lower is better)
Translates to: LWSGPACGVQML*MRVTLSVLFTF
Trigger: AAAAGTGAATAGTACAGACAAAGTTACCCTCATTCATAGCATTTGGACTCCACAGGCAGGGCCGGACCATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000506714.5
CDS GCA 72 bp AGCAGAGAGCTATTCTCTTTTCGCCTATTAAGTTTCTaGTCTATACCTCACCCTTTGTGTGTGTCCATGTCC +
Preference number: 6 (lower is better)
Translates to: SRELFSFRLLSF*SIPHPLCVSMS
Trigger: GGACATGGACACACACAAAGGGTGAGGTATAGAGCAGAAACTTAATAGGCGAAAAGAGAATAGCTCTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506842.1
CDS CAA 90 bp CTATTCTCTTTTCGCCTATTAAGTTTCTGCTCTATACCTCACCCTTaGTGTGTGTCCATGTCCTTGATCTCCATGGCTGTGAGACAAAGA +
Preference number: 6 (lower is better)
Translates to: LFSFRLLSFCSIPHP*CVSMSLISMAVRQR
Trigger: TCTTTGTCTCACAGCCATGGAGATCAAGGACATGGACACACACAAAGGGTGAGGTATAGAGCAGAAACTTAATAGGCGAAAAGAGAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506842.1
CDS CCA 72 bp CCTTGGGTGTCACCCCAGACAATGAGGCCACTTCAATaGCTTCATTCTAAACAAGACTGTACCTTTTTAAAA +
Preference number: 6 (lower is better)
Translates to: PWVSPQTMRPLQ*LHSKQDCTFLK
Trigger: TTTTAAAAAGGTACAGTCTTGTTTAGAATGAAGCCATTGAAGTGGCCTCATTGTCTGGGGTGACACCCAAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000506842.1
CDS TCA 72 bp AAGTTGGCATATGTTCCAGCAAAAATGTGTTTGACTTaGACATCCACGAAGTCTTCAGCAGAAATCAGGCAG +
Preference number: 6 (lower is better)
Translates to: KLAYVPAKMCLT*TSTKSSAEIRQ
Trigger: CTGCCTGATTTCTGCTGAAGACTTCGTGGATGTTCAAGTCAAACACATTTTTGCTGGAACATATGCCAACTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000380265.9
ENST00000515365.1
CDS TCA 72 bp AAGTTGGCATATGTTCCAGCAAAAATGTGTTTGACTTaGACATCCACGAAGTCTTCCACAATCTATCTGCGA +
Preference number: 6 (lower is better)
Translates to: KLAYVPAKMCLT*TSTKSSTIYLR
Trigger: TCGCAGATAGATTGTGGAAGACTTCGTGGATGTTCAAGTCAAACACATTTTTGCTGGAACATATGCCAACTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000273960.7
CDS GCA 72 bp TATTTATTTTGCATTTACATATTTATGGTCCGGCCCTaGCTGTGGAGTCCAAATGCTATGAATGAGGGTAAC +
Preference number: 6 (lower is better)
Translates to: YLFCIYIFMVRP*LWSPNAMNEGN
Trigger: GTTACCCTCATTCATAGCATTTGGACTCCACAGGCAGGGCCGGACCATAAATATGTAAATGCAAAATAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506714.5
CDS CAA 72 bp AAAGTTGGCATATGTTCCAGCAAAAATGTGTTTGACTaGAACATCCACGAAGTCTTCAGCAGAAATCAGGCA +
Preference number: 6 (lower is better)
Translates to: KVGICSSKNVFD*NIHEVFSRNQA
Trigger: TGCCTGATTTCTGCTGAAGACTTCGTGGATGTTCAAGTCAAACACATTTTTGCTGGAACATATGCCAACTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264346.12
ENST00000380265.9
ENST00000515365.1
CDS TCA 72 bp CCATTTGAAGAACTTCGATTGCTGCCTGACACTTGGTaGCTGCAGTTAAAATTAGTCATGACTGTTATCTAT +
Preference number: 6 (lower is better)
Translates to: PFEELRLLPDTW*LQLKLVMTVIY
Trigger: ATAGATAACAGTCATGACTAATTTTAACTGCAGTCACCAAGTGTCAGGCAGCAATCGAAGTTCTTCAAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000506714.5