RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HERC3 (Homo sapiens)

Ensembl gene IDs: ENSG00000138641

Ensembl transcript IDs: ENST00000264345.7, ENST00000402738.6, ENST00000407637.5, ENST00000422770.5, ENST00000426683.5, ENST00000431413.5, ENST00000452979.5, ENST00000470815.1, ENST00000504994.1, ENST00000512194.2

Found 359 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAGTTTCTGAAGCAGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTaGAACAAGCCAGAGGCATTTCCAAGTGTACAGAGGAAGGTGATG +
Preference number: 1 (lower is better)
Translates to: GVSEAVLSSFGLKEG*NKPEAFPSVQRKVM
Trigger: CATCACCTTCCTCTGTACACTTGGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACTGCTTCAGAAACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR TCA 90 bp GCACTACATTTCAGATGCTCATATATCCATTCCAAAAATGTCTACTaGGTGACAAGTTCATGCCAGGTCCTGTGCTATATGCTAGGTTTA +
Preference number: 1 (lower is better)
Translates to: ALHFRCSYIHSKNVY*VTSSCQVLCYMLGL
Trigger: TAAACCTAGCATATAGCACAGGACCTGGCATGAACTTGTCACTCAGTAGACATTTTTGGAATGGATATATGAGCATCTGAAATGTAGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR CAA 90 bp TTCCTCTTGCTCCTGCTTCTGCCATGTGAAGTGTCTGCTCCTTCTTaGCCTTCTGCCATGACTGTAAGATTCCTGAGGCCTCCCCAGAAG +
Preference number: 2 (lower is better)
Translates to: FLLLLLLPCEVSAPS*PSAMTVRFLRPPQK
Trigger: CTTCTGGGGAGGCCTCAGGAATCTTACAGTCATGGCAGAAGGCAAAGAAGGAGCAGACACTTCACATGGCAGAAGCAGGAGCAAGAGGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR-3UTR TCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCGTGTACAGAGGAAGGTaGTGTTCTCGCATGCGCAGA +
Preference number: 2 (lower is better)
Translates to: SPFLLWVKGGLQQARGISVYRGR*CSRMRR
Trigger: TCTGCGCATGCGAGAACATCACCTTCCTCTGTACAC...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR TCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCGACAAGGAAGCACTGTaGGAAAACATCAGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: SPFLLWVKGGLQQARGISDKEAL*ENIRAE
Trigger: CTCAGCCCTGATGTTTTCTCACAGTGCTTCCTTGTC...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR CAA 90 bp ATCTGGTGGTGTAAAAAGTATGGCACCTCCTCTCCACTCTTCCTCTaGCTCCTGCTTCTGCCATGTGAAGTGTCTGCTCCTTCTTTGCCT +
Preference number: 2 (lower is better)
Translates to: IWWCKKYGTSSPLFL*LLLLPCEVSAPSLP
Trigger: AGGCAAAGAAGGAGCAGACACTTCACATGGCAGAAGCAGGAGCAAGAGGAAGAGTGGAGAGGAGGTGCCATACTTTTTACACCACCAGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR-3UTR GCA 90 bp GCTCTGAGTTCACATGAGATCTGGTGGTGTAAAAAGTATGGCACCTCCTCTCCATCTTGCTCCTGCTTCTaGCATGTGAAGTGTCTGCTC +
Preference number: 2 (lower is better)
Translates to: ALSSHEIWWCKKYGTSSPSCSCF*HVKCLL
Trigger: GAGCAGACACTTCACATGGCAGAAGCAGGAGCAAGA...TGGAGAGGAGGTGCCATACTTTTTACACCACCAGATCTCATGTGAACTCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR-3UTR TCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCGACAAGGAAGCACTGTaGGAAAACATCAGGGCTGAG +
Preference number: 2 (lower is better)
Translates to: IVNATCSKSESARGGGSIDKEAL*ENIRAE
Trigger: CTCAGCCCTGATGTTTTCTCACAGTGCTTCCTTGTC...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR GCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCTTTCATCCAGCAGAGTaGAACACATTCACAAGTGCA +
Preference number: 2 (lower is better)
Translates to: SPFLLWVKGGLQQARGISFHPAE*NTFTSA
Trigger: TGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAA...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR TCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCCCTCAATGTGGACACTaGGGAACGAAGGGAAATACT +
Preference number: 2 (lower is better)
Translates to: IVNATCSKSESARGGGSIPQCGH*GTKGNT
Trigger: AGTATTTCCCTTCGTTCCTCAGTGTCCACATTGAGG...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR TCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGCCTCAATGTGGACACTaGGGAACGAAGGGAAATACT +
Preference number: 2 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRPQCGH*GTKGNT
Trigger: AGTATTTCCCTTCGTTCCTCAGTGTCCACATTGAGG...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR TCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGGGAATTGGGAGTTTCTaGAGCAGTCCTTTCCTCCTT +
Preference number: 2 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRGIGSF*SSPFLL
Trigger: AAGGAGGAAAGGACTGCTTCAGAAACTCCCAATTCC...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR GCA 90 bp GGTCCTGTGCTATATGCTAGGTTTACAAAAAGGAAAAGAGTTTGTCTGTGTCCTCTCCACTCTTCCTCTTaGTCCTGCTTCTGCCATGTG +
Preference number: 2 (lower is better)
Translates to: GPVLYARFTKRKRVCLCPLHSSS*SCFCHV
Trigger: CACATGGCAGAAGCAGGAGCAAGAGGAAGAGTGGAG...AGGACACAGACAAACTCTTTTCCTTTTTGTAAACCTAGCATATAGCACAGGACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR-3UTR TCA 90 bp GGTCCTGTGCTATATGCTAGGTTTACAAAAAGGAAAAGAGTTTGTCTGTGTCCTTCCCAATGTTGGAGGTaGGGCATGGTGGTATGTGTT +
Preference number: 2 (lower is better)
Translates to: GPVLYARFTKRKRVCLCPSQCWR*GMVVCV
Trigger: AACACATACCACCATGCCTCACCTCCAACATTGGGA...AGGACACAGACAAACTCTTTTCCTTTTTGTAAACCTAGCATATAGCACAGGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR-3UTR GCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCTTTCATCCAGCAGAGTaGAACACATTCACAAGTGCA +
Preference number: 2 (lower is better)
Translates to: IVNATCSKSESARGGGSIFHPAE*NTFTSA
Trigger: TGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAA...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR GCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCCAGCCATGGGAAAGTTaGTATTCCCTCAAGAACTTT +
Preference number: 2 (lower is better)
Translates to: IVNATCSKSESARGGGSIQPWES*YSLKNF
Trigger: AAAGTTCTTGAGGGAATAGCAACTTTCCCATGGCTG...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR CCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCAAGTGCAAGGAATACTaGGTAGTTTGGTTTAAAACA +
Preference number: 2 (lower is better)
Translates to: SPFLLWVKGGLQQARGISKCKEY*VVWFKT
Trigger: TGTTTTAAACCAAACTACCCAGTATTCCTTGCACTT...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR CCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCTCAGCTTTTTGGAATTaGGAGTTTCTGAAGCAGTCC +
Preference number: 2 (lower is better)
Translates to: IVNATCSKSESARGGGSISAFWN*EFLKQS
Trigger: GGACTGCTTCAGAAACTCCCAATTCCAAAAAGCTGA...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR GCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCCAACACATTCACAAGTaGAAGGAATACTGGGTAGTT +
Preference number: 2 (lower is better)
Translates to: IVNATCSKSESARGGGSIQHIHK*KEYWVV
Trigger: AACTACCCAGTATTCCTTGCACTTGTGAATGTGTTG...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR GCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGTTTCATCCAGCAGAGTaGAACACATTCACAAGTGCA +
Preference number: 2 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRFHPAE*NTFTSA
Trigger: TGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAA...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR GCA 90 bp GGTCCTGTGCTATATGCTAGGTTTACAAAAAGGAAAAGAGTTTGTCTGTGTCCTTCTTCCTCTTGCTCCTaGTTCTGCCATGTGAAGTGT +
Preference number: 2 (lower is better)
Translates to: GPVLYARFTKRKRVCLCPSSSCS*FCHVKC
Trigger: ACACTTCACATGGCAGAAGCAGGAGCAAGAGGAAGA...AGGACACAGACAAACTCTTTTCCTTTTTGTAAACCTAGCATATAGCACAGGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR-3UTR GCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGCAACACATTCACAAGTaGAAGGAATACTGGGTAGTT +
Preference number: 2 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRQHIHK*KEYWVV
Trigger: AACTACCCAGTATTCCTTGCACTTGTGAATGTGTTG...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR GCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCCAACGAATGCTAAGCTaGTCTGCACATCTTTTAAAA +
Preference number: 2 (lower is better)
Translates to: IVNATCSKSESARGGGSIQRMLS*SAHLLK
Trigger: TTTTAAAAGATGTGCAGAGCAGCTTAGCATTCGTTG...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR TCA 90 bp CAAGGTCTGTGGAAACAAAATAACTGGTATAGTTTGAATGTATGTTCTGGTCAACCTGCTTCTGCCATGTaGAGTGTCTGCTCCTTCTTT +
Preference number: 2 (lower is better)
Translates to: QGLWKQNNWYSLNVCSGQPASAM*SVCSFF
Trigger: AAAGAAGGAGCAGACACTTCACATGGCAGAAGCAGG...TTGACCAGAACATACATTCAAACTATACCAGTTATTTTGTTTCCACAGACCTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR-3UTR GCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGAGTTTAAAAATCCACTaGCATTTCATCCAGCAGAGT +
Preference number: 2 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRSLKIH*HFIQQS
Trigger: ACTCTGCTGGATGAAATGGCAGTGGATTTTTAAACT...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR GCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGCAACGAATGCTAAGCTaGTCTGCACATCTTTTAAAA +
Preference number: 2 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRQRMLS*SAHLLK
Trigger: TTTTAAAAGATGTGCAGAGCAGCTTAGCATTCGTTG...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR GCA 90 bp GGTCCTGTGCTATATGCTAGGTTTACAAAAAGGAAAAGAGTTTGTCTGTGTCCTTGCTCTTTACAGCAATaGAAGAACGGCCTAACACAA +
Preference number: 2 (lower is better)
Translates to: GPVLYARFTKRKRVCLCPCSLQQ*KNGLTQ
Trigger: TTGTGTTAGGCCGTTCTTGCATTGCTGTAAAGAGCA...AGGACACAGACAAACTCTTTTCCTTTTTGTAAACCTAGCATATAGCACAGGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR-3UTR TCA 90 bp GGTTACTGTTTCAAACAAATTCCTGATCAAGCCATAAGTGTGTCACTTTATCGACCTCCAGAATCTATGTaGTCTTGGGCAAATTACTTG +
Preference number: 2 (lower is better)
Translates to: GYCFKQIPDQAISVSLYRPPESM*SWANYL
Trigger: CAAGTAATTTGCCCAAGATCACATAGATTCTGGAGG...TCGATAAAGTGACACACTTATGGCTTGATCAGGAATTTGTTTGAAACAGTAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR-3UTR GCA 90 bp GGTTACTGTTTCAAACAAATTCCTGATCAAGCCATAAGTGTGTCACTTTATCGATCCTTCTTTGCCTTCTaGCATGACTGTAAGATTCCT +
Preference number: 2 (lower is better)
Translates to: GYCFKQIPDQAISVSLYRSFFAF*HDCKIP
Trigger: AGGAATCTTACAGTCATGGCAGAAGGCAAAGAAGGA...TCGATAAAGTGACACACTTATGGCTTGATCAGGAATTTGTTTGAAACAGTAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR-3UTR GCA 90 bp GGTTACTGTTTCAAACAAATTCCTGATCAAGCCATAAGTGTGTCACTTTATCGACCTGGGTTTAAATCCTaGCTCCAGAATCTATGTGAT +
Preference number: 2 (lower is better)
Translates to: GYCFKQIPDQAISVSLYRPGFKS*LQNLCD
Trigger: ATCACATAGATTCTGGAGGCAGGATTTAAACCCAGG...TCGATAAAGTGACACACTTATGGCTTGATCAGGAATTTGTTTGAAACAGTAACC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR-3UTR CCA 90 bp GGTTACTGTTTCAAACAAATTCCTGATCAAGCCATAAGTGTGTCACTTTATCGATCACATGAGATCTGGTaGTGTAAAAAGTATGGCACC +
Preference number: 2 (lower is better)
Translates to: GYCFKQIPDQAISVSLYRSHEIW*CKKYGT
Trigger: GGTGCCATACTTTTTACACCACCAGATCTCATGTGA...TCGATAAAGTGACACACTTATGGCTTGATCAGGAATTTGTTTGAAACAGTAACC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR-3UTR CCA 90 bp TTATTAGCAACAACAATAAAATGTATACACCACCACCAAGGTCTGTGGAAACAAGTTGGAGGTGAGGCATaGTGGTATGTGTTTAGATCA +
Preference number: 2 (lower is better)
Translates to: LLATTIKCIHHHQGLWKQVGGEA*WYVFRS
Trigger: TGATCTAAACACATACCACCATGCCTCACCTCCAAC...TTGTTTCCACAGACCTTGGTGGTGGTGTATACATTTTATTGTTGTTGCTAATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR-3UTR CCA 90 bp ACTTATGATGGTTACTGTTTCAAACAAATTCCTGATCAAGCCATAAGTGTGTCACACCACCAAGGTCTGTaGAAACAAAATAACTGGTAT +
Preference number: 2 (lower is better)
Translates to: TYDGYCFKQIPDQAISVSHHQGL*KQNNWY
Trigger: ATACCAGTTATTTTGTTTCCACAGACCTTGGTGGTG...TGACACACTTATGGCTTGATCAGGAATTTGTTTGAAACAGTAACCATCATAAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR TCA 72 bp CTCATGAATGGCTTGGGCCATCCCCTTGGTGATAAGTaGGCTCTTGCTCTGAGTTCACATGAGATCTGGTGG +
Preference number: 3 (lower is better)
Translates to: LMNGLGHPLGDK*ALALSSHEIWW
Trigger: CCACCAGATCTCATGTGAACTCAGAGCAAGAGCTCACTTATCACCAAGGGGATGGCCCAAGCCATTCATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR GCA 72 bp GAAGCAGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTaGAACAAGCCAGAGGCATTTCCAAGTGTACAGAGG +
Preference number: 3 (lower is better)
Translates to: EAVLSSFGLKEG*NKPEAFPSVQR
Trigger: CCTCTGTACACTTGGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACTGCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR TCA 72 bp TGGACCCAGACTCAGCTTTTTGGAATTGGGAGTTTCTaGAGCAGTCCTTTCCTCCTTTGGGTTAAAGGAGGG +
Preference number: 3 (lower is better)
Translates to: WTQTQLFGIGSF*SSPFLLWVKGG
Trigger: CCCTCCTTTAACCCAAAGGAGGAAAGGACTGCTTCAGAAACTCCCAATTCCAAAAAGCTGAGTCTGGGTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR GCA 72 bp CCAAGCAGATGGCTGCATCATGCTCCCTGTAGAGCCTaGAGAACTGTGAGCCAATTAAAACTCTTTTCTTCA +
Preference number: 3 (lower is better)
Translates to: PSRWLHHAPCRA*RTVSQLKLFSS
Trigger: TGAAGAAAAGAGTTTTAATTGGCTCACAGTTCTGCAGGCTCTACAGGGAGCATGATGCAGCCATCTGCTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR-3UTR CAA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCCTCAGCTTTTTGGAATaGGGAGTTTCTGAAGCAGTC +
Preference number: 3 (lower is better)
Translates to: IVNATCSKSESARGGGSILSFLE*GVSEAV
Trigger: GACTGCTTCAGAAACTCCCAATTCCAAAAAGCTGAG...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR CAA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCCCCAGACTCAGCTTTTaGGAATTGGGAGTTTCTGAA +
Preference number: 3 (lower is better)
Translates to: IVNATCSKSESARGGGSIPRLSF*ELGVSE
Trigger: TTCAGAAACTCCCAATTCCAAAAAGCTGAGTCTGGG...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR CAA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCACAGCCATGGGAAAGTaGCTATTCCCTCAAGAACTT +
Preference number: 3 (lower is better)
Translates to: IVNATCSKSESARGGGSITAMGK*LFPQEL
Trigger: AAGTTCTTGAGGGAATAGCAACTTTCCCATGGCTGT...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR-3UTR CAA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGACAGCCATGGGAAAGTaGCTATTCCCTCAAGAACTT +
Preference number: 3 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRTAMGK*LFPQEL
Trigger: AAGTTCTTGAGGGAATAGCAACTTTCCCATGGCTGT...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR CCA 72 bp TGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTaGGTCTATCAATTAACCTTATTGTCAAAGGGACAA +
Preference number: 3 (lower is better)
Translates to: CNLLQKRECKRW*VYQLTLLSKGQ
Trigger: TTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
3UTR GCA 72 bp CATAAATCACCCTGTTTCAGGTGCTCTTTACAGCAATaGAAGAACGGCCTAACACAACAGTATTTCCTGCTT +
Preference number: 3 (lower is better)
Translates to: HKSPCFRCSLQQ*KNGLTQQYFLL
Trigger: AAGCAGGAAATACTGTTGTGTTAGGCCGTTCTTGCATTGCTGTAAAGAGCACCTGAAACAGGGTGATTTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR-3UTR CAA 90 bp GGTTACTGTTTCAAACAAATTCCTGATCAAGCCATAAGTGTGTCACTTTATCGAGTGTCTGCTCCTTCTTaGCCTTCTGCCATGACTGTA +
Preference number: 3 (lower is better)
Translates to: GYCFKQIPDQAISVSLYRVSAPS*PSAMTV
Trigger: TACAGTCATGGCAGAAGGCAAAGAAGGAGCAGACAC...TCGATAAAGTGACACACTTATGGCTTGATCAGGAATTTGTTTGAAACAGTAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR-3UTR CAA 90 bp ACTTATGATGGTTACTGTTTCAAACAAATTCCTGATCAAGCCATAAGTGTGTCATCTCCACTCTTCCTCTaGCTCCTGCTTCTGCCATGT +
Preference number: 3 (lower is better)
Translates to: TYDGYCFKQIPDQAISVSSPLFL*LLLLPC
Trigger: ACATGGCAGAAGCAGGAGCAAGAGGAAGAGTGGAGA...TGACACACTTATGGCTTGATCAGGAATTTGTTTGAAACAGTAACCATCATAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR-3UTR CAA 90 bp TTATTAGCAACAACAATAAAATGTATACACCACCACCAAGGTCTGTGGAAACAAGCAGTAATCCCAATGTaGGAGGTGAGGCATGGTGGT +
Preference number: 3 (lower is better)
Translates to: LLATTIKCIHHHQGLWKQAVIPM*EVRHGG
Trigger: ACCACCATGCCTCACCTCCAACATTGGGATTACTGC...TTGTTTCCACAGACCTTGGTGGTGGTGTATACATTTTATTGTTGTTGCTAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR GCA 72 bp TTTGAATGTATGTTCTGGTCAAAACTCATGTTGAATTaGAGTAATCCCAATGTTGGAGGTGAGGCATGGTGG +
Preference number: 3 (lower is better)
Translates to: FECMFWSKLMLN*SNPNVGGEAWW
Trigger: CCACCATGCCTCACCTCCAACATTGGGATTACTGCAATTCAACATGAGTTTTGACCAGAACATACATTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR TCA 72 bp TTCAGATGCTCATATATCCATTCCAAAAATGTCTACTaGGTGACAAGTTCATGCCAGGTCCTGTGCTATATG +
Preference number: 3 (lower is better)
Translates to: FRCSYIHSKNVY*VTSSCQVLCYM
Trigger: CATATAGCACAGGACCTGGCATGAACTTGTCACTCAGTAGACATTTTTGGAATGGATATATGAGCATCTGAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR-3UTR CAA 90 bp TTATTAGCAACAACAATAAAATGTATACACCACCACCAAGGTCTGTGGAAACAATGGTCAAAACTCATGTaGAATTGCAGTAATCCCAAT +
Preference number: 3 (lower is better)
Translates to: LLATTIKCIHHHQGLWKQWSKLM*NCSNPN
Trigger: ATTGGGATTACTGCAATTCAACATGAGTTTTGACCA...TTGTTTCCACAGACCTTGGTGGTGGTGTATACATTTTATTGTTGTTGCTAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR TCA 72 bp ACCAAGGTCTGTGGAAACAAAATAACTGGTATAGTTTaGATGTATGTTCTGGTCAAAACTCATGTTGAATTG +
Preference number: 3 (lower is better)
Translates to: TKVCGNKITGIV*MYVLVKTHVEL
Trigger: CAATTCAACATGAGTTTTGACCAGAACATACATTCAAACTATACCAGTTATTTTGTTTCCACAGACCTTGGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR TCA 90 bp CCTCCCCAGAAGCCAAGCAGATGGCTGCATCATGCTCCCTGTAGAGCCTGCAGATGTTCTTTCCCCAGGTaGAGAACTGGCCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: PPQKPSRWLHHAPCRACRCSFPR*RTGHQP
Trigger: CGGCTGATGGCCAGTTCTTCACCTGGGGAAAGAACA...TCTGCAGGCTCTACAGGGAGCATGATGCAGCCATCTGCTTGGCTTCTGGGGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR TCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCGCGATCAGCTCGGGCTaGAAGCTGGCCACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISAISSG*KLATVG
Trigger: GCCCACAGTGGCCAGCTTTCAGCCCGAGCTGATCGC...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GCCATGACTGTAAGATTCCTGAGGCCTCCCCAGAAGCCAAGCAGATGGCTGCATCTGAGGGCCAGACTGTaGGACTCGCCACATGCCACA +
Preference number: 4 (lower is better)
Translates to: AMTVRFLRPPQKPSRWLHLRARL*DSPHAT
Trigger: TGTGGCATGTGGCGAGTCCCACAGTCTGGCCCTCAG...ATGCAGCCATCTGCTTGGCTTCTGGGGAGGCCTCAGGAATCTTACAGTCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CCA 90 bp GCCATGACTGTAAGATTCCTGAGGCCTCCCCAGAAGCCAAGCAGATGGCTGCATCCCCAGGTGAAGAACTaGCCATCAGCCGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: AMTVRFLRPPQKPSRWLHPQVKN*PSAARA
Trigger: GGCTCTTGCGGCTGATGGCCAGTTCTTCACCTGGGG...ATGCAGCCATCTGCTTGGCTTCTGGGGAGGCCTCAGGAATCTTACAGTCATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCGCTCGGGCTGAAAGCTaGCCACTGTGGGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISARAES*PLWAAQ
Trigger: CTGGGCTGCCCACAGTGGCCAGCTTTCAGCCCGAGC...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp GCCATGACTGTAAGATTCCTGAGGCCTCCCCAGAAGCCAAGCAGATGGCTGCATGTCATGAGTCCTAGCTaGCCATCACTCCCTGCACCC +
Preference number: 4 (lower is better)
Translates to: AMTVRFLRPPQKPSRWLHVMSPS*PSLPAP
Trigger: GGGTGCAGGGAGTGATGGTCAGCTAGGACTCATGAC...ATGCAGCCATCTGCTTGGCTTCTGGGGAGGCCTCAGGAATCTTACAGTCATGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCCTGAGGGCCAGACTGTaGGACTCGCCACATGCCACA +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISLRARL*DSPHAT
Trigger: TGTGGCATGTGGCGAGTCCCACAGTCTGGCCCTCAG...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCGTCATGAGTCCTAGCTaGCCATCACTCCCTGCACCC +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISVMSPS*PSLPAP
Trigger: GGGTGCAGGGAGTGATGGTCAGCTAGGACTCATGAC...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGGCTGGCCTCGGTCACTaGGGGCCAGACTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRAGLGH*GPDCGT
Trigger: AGTCCCACAGTCTGGCCCTCAGTGACCGAGGCCAGC...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCTGTTCTTTCCCCAGGTaGAGAACTGGCCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISCSFPR*RTGHQP
Trigger: CGGCTGATGGCCAGTTCTTCACCTGGGGAAAGAACA...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp GCCATGACTGTAAGATTCCTGAGGCCTCCCCAGAAGCCAAGCAGATGGCTGCATTGCCCAGTTCCTAATTaGCCTCTTGCTCCACAACCA +
Preference number: 4 (lower is better)
Translates to: AMTVRFLRPPQKPSRWLHCPVPN*PLAPQP
Trigger: TGGTTGTGGAGCAAGAGGTCAATTAGGAACTGGGCA...ATGCAGCCATCTGCTTGGCTTCTGGGGAGGCCTCAGGAATCTTACAGTCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR TCA 90 bp GCCATGACTGTAAGATTCCTGAGGCCTCCCCAGAAGCCAAGCAGATGGCTGCATCCTGCTTCTGCCATGTaGAGTGTCTGCTCCTTCTTT +
Preference number: 4 (lower is better)
Translates to: AMTVRFLRPPQKPSRWLHPASAM*SVCSFF
Trigger: AAAGAAGGAGCAGACACTTCACATGGCAGAAGCAGG...ATGCAGCCATCTGCTTGGCTTCTGGGGAGGCCTCAGGAATCTTACAGTCATGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCTCACTGAGCCCTAGCTaGCCGGCATTATTCATCCCC +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISSLSPS*PALFIP
Trigger: GGGGATGAATAATGCCGGGCAGCTAGGGCTCAGTGA...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCCCGCTGGCTGTGGACTaGATGACAATCTGCAGACTG +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISPLAVD*MTICRL
Trigger: CAGTCTGCAGATTGTCATCCAGTCCACAGCCAGCGG...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GCTCTGAGTTCACATGAGATCTGGTGGTGTAAAAAGTATGGCACCTCCTCTCCAAGCCGAACCGCAGCTTaGGACTCCGACTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: ALSSHEIWWCKKYGTSSPSRTAA*DSDCHS
Trigger: GCTGTGACAGTCGGAGTCCCAAGCTGCGGTTCGGCT...TGGAGAGGAGGTGCCATACTTTTTACACCACCAGATCTCATGTGAACTCAGAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCCTCTCATGGCCCAGTTaGCCCTTGGTGTTCAAACCA +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISLSWPS*PLVFKP
Trigger: TGGTTTGAACACCAAGGGGCAACTGGGCCATGAGAG...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCCTGACCATCACTCCCTaGACCCCAAGAAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISLTITP*TPRKQL
Trigger: CAGCTGTTTTCTTGGGGTGCAGGGAGTGATGGTCAG...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp CCTCCCCAGAAGCCAAGCAGATGGCTGCATCATGCTCCCTGTAGAGCCTGCAGATCCTTCTTTGCCTTCTaGCATGACTGTAAGATTCCT +
Preference number: 4 (lower is better)
Translates to: PPQKPSRWLHHAPCRACRSFFAF*HDCKIP
Trigger: AGGAATCTTACAGTCATGGCAGAAGGCAAAGAAGGA...TCTGCAGGCTCTACAGGGAGCATGATGCAGCCATCTGCTTGGCTTCTGGGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCGTGCTGATACCAGGTTaGCCCAGAGACCAATATCCC +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISVLIPG*PRDQYP
Trigger: GGGATATTGGTCTCTGGGCCAACCTGGTATCAGCAC...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCGGCCCAGTTGCCCCTTaGTGTTCAAACCACATGTGT +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISGPVAP*CSNHMC
Trigger: ACACATGTGGTTTGAACACCAAGGGGCAACTGGGCC...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCCTGAGGGCCAGACTGTaGGACTCGCCACATGCCACA +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSILRARL*DSPHAT
Trigger: TGTGGCATGTGGCGAGTCCCACAGTCTGGCCCTCAG...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTACCCCAGGTGAAGAACTaGCCATCAGCCGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVPQVKN*PSAARA
Trigger: GGCTCTTGCGGCTGATGGCCAGTTCTTCACCTGGGG...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCCCCCAGGTGAAGAACTaGCCATCAGCCGCAAGAGCC +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSIPQVKN*PSAARA
Trigger: GGCTCTTGCGGCTGATGGCCAGTTCTTCACCTGGGG...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTAAGCCGAACCGCAGCTTaGGACTCCGACTGTCACAGC +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVSRTAA*DSDCHS
Trigger: GCTGTGACAGTCGGAGTCCCAAGCTGCGGTTCGGCT...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402738.6
CDS-3UTR TCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTGCTGGCCTCGGTCACTaGGGGCCAGACTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSAGLGH*GPDCGT
Trigger: AGTCCCACAGTCTGGCCCTCAGTGACCGAGGCCAGC...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp GGTCCTGTGCTATATGCTAGGTTTACAAAAAGGAAAAGAGTTTGTCTGTGTCCTGCTGGCCTCGGTCACTaGGGGCCAGACTGTGGGACT +
Preference number: 4 (lower is better)
Translates to: GPVLYARFTKRKRVCLCPAGLGH*GPDCGT
Trigger: AGTCCCACAGTCTGGCCCTCAGTGACCGAGGCCAGC...AGGACACAGACAAACTCTTTTCCTTTTTGTAAACCTAGCATATAGCACAGGACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR TCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCGTCATGAGTCCTAGCTaGCCATCACTCCCTGCACCC +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSIVMSPS*PSLPAP
Trigger: GGGTGCAGGGAGTGATGGTCAGCTAGGACTCATGAC...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCTGCCCAGTTCCTAATTaGCCTCTTGCTCCACAACCA +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISCPVPN*PLAPQP
Trigger: TGGTTGTGGAGCAAGAGGTCAATTAGGAACTGGGCA...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp CCTCCCCAGAAGCCAAGCAGATGGCTGCATCATGCTCCCTGTAGAGCCTGCAGAACACATGATTTAGAATaGCCTGGGTTTAAATCCTGC +
Preference number: 4 (lower is better)
Translates to: PPQKPSRWLHHAPCRACRTHDLE*PGFKSC
Trigger: GCAGGATTTAAACCCAGGTCATTCTAAATCATGTGT...TCTGCAGGCTCTACAGGGAGCATGATGCAGCCATCTGCTTGGCTTCTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR TCA 90 bp GCCATGACTGTAAGATTCCTGAGGCCTCCCCAGAAGCCAAGCAGATGGCTGCATAAAATGTCTACTGAGTaGCAAGTTCATGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: AMTVRFLRPPQKPSRWLHKMSTE*QVHARS
Trigger: GGACCTGGCATGAACTTGTCACTCAGTAGACATTTT...ATGCAGCCATCTGCTTGGCTTCTGGGGAGGCCTCAGGAATCTTACAGTCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCGCAAGAGCCAAGCAATaGCAGTTGCCACAGGAAACT +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISARAKQ*QLPQET
Trigger: AGTTTCCTGTGGCAACTGGCATTGCTTGGCTCTTGC...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp CCTCCCCAGAAGCCAAGCAGATGGCTGCATCATGCTCCCTGTAGAGCCTGCAGACGTAAGAGTTTTACATaGCATGGAGATTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: PPQKPSRWLHHAPCRACRRKSFT*HGDSRS
Trigger: AGATCGAGAATCTCCATGCCATGTAAAACTCTTACG...TCTGCAGGCTCTACAGGGAGCATGATGCAGCCATCTGCTTGGCTTCTGGGGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTGCTCGGGCTGAAAGCTaGCCACTGTGGGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSARAES*PLWAAQ
Trigger: CTGGGCTGCCCACAGTGGCCAGCTTTCAGCCCGAGC...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GCCATGACTGTAAGATTCCTGAGGCCTCCCCAGAAGCCAAGCAGATGGCTGCATGTTGGAGGTGAGGCATaGTGGTATGTGTTTAGATCA +
Preference number: 4 (lower is better)
Translates to: AMTVRFLRPPQKPSRWLHVGGEA*WYVFRS
Trigger: TGATCTAAACACATACCACCATGCCTCACCTCCAAC...ATGCAGCCATCTGCTTGGCTTCTGGGGAGGCCTCAGGAATCTTACAGTCATGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR CAA 72 bp CTCCTGCTTCTGCCATGTGAAGTGTCTGCTCCTTCTTaGCCTTCTGCCATGACTGTAAGATTCCTGAGGCCT +
Preference number: 4 (lower is better)
Translates to: LLLLPCEVSAPS*PSAMTVRFLRP
Trigger: AGGCCTCAGGAATCTTACAGTCATGGCAGAAGGCAAAGAAGGAGCAGACACTTCACATGGCAGAAGCAGGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR TCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTATGTTCTTTCCCCAGGTaGAGAACTGGCCATCAGCCG +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVCSFPR*RTGHQP
Trigger: CGGCTGATGGCCAGTTCTTCACCTGGGGAAAGAACA...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGGAGTCGTGTCCAAGTTaGCCACAGGAACCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRESCPS*PQEPAP
Trigger: TGGCGCTGGTTCCTGTGGGCAACTTGGACACGACTC...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GCTCTGAGTTCACATGAGATCTGGTGGTGTAAAAAGTATGGCACCTCCTCTCCAGTGCTGATACCAGGTTaGCCCAGAGACCAATATCCC +
Preference number: 4 (lower is better)
Translates to: ALSSHEIWWCKKYGTSSPVLIPG*PRDQYP
Trigger: GGGATATTGGTCTCTGGGCCAACCTGGTATCAGCAC...TGGAGAGGAGGTGCCATACTTTTTACACCACCAGATCTCATGTGAACTCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCTTTCCTTCCCTCTCATaGCCCAGTTGCCCCTTGGTG +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSIFPSLS*PSCPLV
Trigger: CACCAAGGGGCAACTGGGCCATGAGAGGGAAGGAAA...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGTGGCCATGCCGTAGATaGGAATCCGATCGCTGCCTG +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRWPCRR*ESDRCL
Trigger: CAGGCAGCGATCGGATTCCCATCTACGGCATGGCCA...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCAGTCCTTTCCTCCTTTaGGTTAAAGGAGGGCTGCAA +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISSPFLL*VKGGLQ
Trigger: TTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCCGAGAGTGCAAGAGGTaGTGGGTCTATCAATTAACC +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISRECKR*WVYQLT
Trigger: GGTTAATTGATAGACCCACCACCTCTTGCACTCTCG...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GCCATGACTGTAAGATTCCTGAGGCCTCCCCAGAAGCCAAGCAGATGGCTGCATTCACATGAGATCTGGTaGTGTAAAAAGTATGGCACC +
Preference number: 4 (lower is better)
Translates to: AMTVRFLRPPQKPSRWLHSHEIW*CKKYGT
Trigger: GGTGCCATACTTTTTACACCACCAGATCTCATGTGA...ATGCAGCCATCTGCTTGGCTTCTGGGGAGGCCTCAGGAATCTTACAGTCATGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR TCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCCACTTCTGTCAGATATaGACCCACACACCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSIHFCQI*THTPGA
Trigger: AGCCCCAGGTGTGTGGGTTCATATCTGACAGAAGTG...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCGCCAAAAACAGCTCCTaGGAGAGACAGGGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSIAKNSS*ERQGKA
Trigger: AGCTTTGCCCTGTCTCTCTCAGGAGCTGTTTTTGGC...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCTATTTCGGGCATACCTaGGACCACCAGTTATCTAGT +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISYFGHT*DHQLSS
Trigger: ACTAGATAACTGGTGGTCTCAGGTATGCCCGAAATA...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp GCTCTGAGTTCACATGAGATCTGGTGGTGTAAAAAGTATGGCACCTCCTCTCCATCCCAATGTTGGAGGTaGGGCATGGTGGTATGTGTT +
Preference number: 4 (lower is better)
Translates to: ALSSHEIWWCKKYGTSSPSQCWR*GMVVCV
Trigger: AACACATACCACCATGCCTCACCTCCAACATTGGGA...TGGAGAGGAGGTGCCATACTTTTTACACCACCAGATCTCATGTGAACTCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCCTCTCATGGCCCAGTTaGCCCTTGGTGTTCAAACCA +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSILSWPS*PLVFKP
Trigger: TGGTTTGAACACCAAGGGGCAACTGGGCCATGAGAG...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCGGTGAGCTTGACAACTaGGGAATCAGACAACTTTCA +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISGELDN*GIRQLS
Trigger: TGAAAGTTGTCTGATTCCCCAGTTGTCAAGCTCACC...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCAGAGCCAATGGGAAGTaGAGATCGACCACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSIRANGK*RSTTVE
Trigger: CTCCACTGTGGTCGATCTCCACTTCCCATTGGCTCT...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGCACTTCTGTCAGATATaGACCCACACACCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRHFCQI*THTPGA
Trigger: AGCCCCAGGTGTGTGGGTTCATATCTGACAGAAGTG...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCTGCCCAGTTCCTAATTaGCCTCTTGCTCCACAACCA +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSICPVPN*PLAPQP
Trigger: TGGTTGTGGAGCAAGAGGTCAATTAGGAACTGGGCA...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCGGTTTACCAGCTTCATaGAATATTTCGGGCATACCT +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISGLPAS*NISGIP
Trigger: AGGTATGCCCGAAATATTTCATGAAGCTGGTAAACC...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGGCCTTCATCCCTGCTTaGTGCAAGAACCACATGAGG +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRAFIPA*CKNHMR
Trigger: CCTCATGTGGTTCTTGCATCAAGCAGGGATGAAGGC...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp GGTTACTGTTTCAAACAAATTCCTGATCAAGCCATAAGTGTGTCACTTTATCGACTTACCAGCTCGGGCTaGAAGCTGGCCACTGTGGGC +
Preference number: 4 (lower is better)
Translates to: GYCFKQIPDQAISVSLYRLTSSG*KLATVG
Trigger: GCCCACAGTGGCCAGCTTTCAGCCCGAGCTGGTAAG...TCGATAAAGTGACACACTTATGGCTTGATCAGGAATTTGTTTGAAACAGTAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTATCAGCCACAATTCCCTaGAGGTTGGTGCTGATACCA +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVSATIP*RLVLIP
Trigger: TGGTATCAGCACCAACCTGCAGGGAATTGTGGCTGA...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCTCAGCCACAATTCCCTaGAGGTTGGTGCTGATACCA +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSISATIP*RLVLIP
Trigger: TGGTATCAGCACCAACCTGCAGGGAATTGTGGCTGA...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTAGCAAGAGCCAAGCAATaGCAGTTGCCACAGGAAACT +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVARAKQ*QLPQET
Trigger: AGTTTCCTGTGGCAACTGGCATTGCTTGGCTCTTGC...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTGAGTCGTGTCCAAGTTaGCCACAGGAACCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSESCPS*PQEPAP
Trigger: TGGCGCTGGTTCCTGTGGGCAACTTGGACACGACTC...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp GGTCCTGTGCTATATGCTAGGTTTACAAAAAGGAAAAGAGTTTGTCTGTGTCCTGAGTCGTGTCCAAGTTaGCCACAGGAACCAGCGCCA +
Preference number: 4 (lower is better)
Translates to: GPVLYARFTKRKRVCLCPESCPS*PQEPAP
Trigger: TGGCGCTGGTTCCTGTGGGCAACTTGGACACGACTC...AGGACACAGACAAACTCTTTTCCTTTTTGTAAACCTAGCATATAGCACAGGACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCTGGGAATCCGATCGCTaGCTGTCAGGAACAAGAGAA +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSIWESDR*LSGTRE
Trigger: TTCTCTTGTTCCTGACAGGCAGCGATCGGATTCCCA...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGTCTGCAGACTGGCCATaGCGTAGATGGGAATCCGAT +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRSADWP*RRWESD
Trigger: ATCGGATTCCCATCTACGGCATGGCCAGTCTGCAGA...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp CAAGGTCTGTGGAAACAAAATAACTGGTATAGTTTGAATGTATGTTCTGGTCAAGCTCGGGCTGAAAGCTaGCCACTGTGGGCAGCCCAG +
Preference number: 4 (lower is better)
Translates to: QGLWKQNNWYSLNVCSGQARAES*PLWAAQ
Trigger: CTGGGCTGCCCACAGTGGCCAGCTTTCAGCCCGAGC...TTGACCAGAACATACATTCAAACTATACCAGTTATTTTGTTTCCACAGACCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTACTTGTAGAGAGCCAATaGGAAGTGGAGATCGACCAC +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVLVESQ*EVEIDH
Trigger: GTGGTCGATCTCCACTTCCCATTGGCTCTCTACAAG...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCCACATGCCACATGAATaGTATGCTGATCTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSIHMPHE*YADLPE
Trigger: CTCTGGCAGATCAGCATATCATTCATGTGGCATGTG...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTGCAGGTTGGCTCCATTaGCTGCCACCTGCATCTGTA +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSAGWLH*LPPASV
Trigger: TACAGATGCAGGTGGCAGTCAATGGAGCCAACCTGC...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTTTGTTCCTGCGAACGTaGAGGACCAGGAAGGGGCTT +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSLFLRT*RTRKGL
Trigger: AAGCCCCTTCCTGGTCCTTCACGTTCGCAGGAACAA...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCGTTATACCAATCAAGTaGAACCAGTTGTGCTCTACA +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISVIPIK*NQLCST
Trigger: TGTAGAGCACAACTGGTTTCACTTGATTGGTATAAC...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTTGGCTGTGGACTGGATaGCAATCTGCAGACTGGCCA +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSWLWTG*QSADWP
Trigger: TGGCCAGTCTGCAGATTGTCATCCAGTCCACAGCCA...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCAAATACTGGACAAGCTaGGAAGCCTCAGGCCAAACT +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSIKYWTS*EASGQT
Trigger: AGTTTGGCCTGAGGCTTCTCAGCTTGTCCAGTATTT...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTACCTCAATGTGGACACTaGGGAACGAAGGGAAATACT +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVPQCGH*GTKGNT
Trigger: AGTATTTCCCTTCGTTCCTCAGTGTCCACATTGAGG...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTAGGAATTGGGAGTTTCTaGAGCAGTCCTTTCCTCCTT +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVGIGSF*SSPFLL
Trigger: AAGGAGGAAAGGACTGCTTCAGAAACTCCCAATTCC...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCCCATTGACTGCCACCTaGATCTGTAGTTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSIPLTAT*ICSSAS
Trigger: AGATGCTGAACTACAGATGCAGGTGGCAGTCAATGG...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGCAACAAGGTTGTTCCTaGGAACGTGAAGGACCAGGA +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRQQGCS*EREGPG
Trigger: TCCTGGTCCTTCACGTTCGCAGGAACAACCTTGTTG...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCCAATATCAGAATGAATaGTCAGCTCTCTTAGGGCAT +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISQYQNE*SALLGH
Trigger: ATGCCCTAAGAGAGCTGAGCATTCATTCTGATATTG...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCCGTAAGAGTTTTACATaGCATGGAGATTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISRKSFT*HGDSRS
Trigger: AGATCGAGAATCTCCATGCCATGTAAAACTCTTACG...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTATTACAGTGGGATGTGTaGCCGAGTAATCTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVLQWDV*PSNLPC
Trigger: ACAAGGGAGATTACTCGGCCACACATCCCACTGTAA...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTACGAGAGTGCAAGAGGTaGTGGGTCTATCAATTAACC +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVRECKR*WVYQLT
Trigger: GGTTAATTGATAGACCCACCACCTCTTGCACTCTCG...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGCACATGCCACATGAATaGTATGCTGATCTGCCAGAG +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRHMPHE*YADLPE
Trigger: CTCTGGCAGATCAGCATATCATTCATGTGGCATGTG...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTGCCAAAAACAGCTCCTaGGAGAGACAGGGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSAKNSS*ERQGKA
Trigger: AGCTTTGCCCTGTCTCTCTCAGGAGCTGTTTTTGGC...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTATATTTCGGGCATACCTaGGACCACCAGTTATCTAGT +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVYFGHT*DHQLSS
Trigger: ACTAGATAACTGGTGGTCTCAGGTATGCCCGAAATA...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCGATGCAAGAACCACATaGGGTAGTCTTCCTGAATGT +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSIDARTT*GSLPEC
Trigger: ACATTCAGGAAGACTACCTCATGTGGTTCTTGCATC...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTGCCTTCATCCCTGCTTaGTGCAAGAACCACATGAGG +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSAFIPA*CKNHMR
Trigger: CCTCATGTGGTTCTTGCATCAAGCAGGGATGAAGGC...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTCATAGCCCTCAGTTCTaGAGGCTGGAAGAGCTCAAG +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSHSPQF*RLEELK
Trigger: CTTGAGCTCTTCCAGCCTTCAGAACTGAGGGCTATG...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTGTGTACAGAGGAAGGTaGTGTTCTCGCATGCGCAGA +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSVYRGR*CSRMRR
Trigger: TCTGCGCATGCGAGAACATCACCTTCCTCTGTACAC...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTCTGACCATCACTCCCTaGACCCCAAGAAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSLTITP*TPRKQL
Trigger: CAGCTGTTTTCTTGGGGTGCAGGGAGTGATGGTCAG...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGACCACCGGCATCCACTaGTTCTTCACCATCAAAGAT +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRTTGIH*FFTIKD
Trigger: ATCTTTGATGGTGAAGAAGCAGTGGATGCCGGTGGT...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTTCTGCAGACTGGCCATaGCGTAGATGGGAATCCGAT +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSSADWP*RRWESD
Trigger: ATCGGATTCCCATCTACGGCATGGCCAGTCTGCAGA...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCTCAGAATCTCTTTGCTaGTGTACTTGGGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSISESLC*CTWGGQ
Trigger: TTGACCTCCCCAAGTACAGCAGCAAAGAGATTCTGA...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCCAACGAATGCTAAGCTaGTCTGCACATCTTTTAAAA +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISQRMLS*SAHLLK
Trigger: TTTTAAAAGATGTGCAGAGCAGCTTAGCATTCGTTG...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp GCTCTGAGTTCACATGAGATCTGGTGGTGTAAAAAGTATGGCACCTCCTCTCCACCTGGGTTTAAATCCTaGCTCCAGAATCTATGTGAT +
Preference number: 4 (lower is better)
Translates to: ALSSHEIWWCKKYGTSSPPGFKS*LQNLCD
Trigger: ATCACATAGATTCTGGAGGCAGGATTTAAACCCAGG...TGGAGAGGAGGTGCCATACTTTTTACACCACCAGATCTCATGTGAACTCAGAGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCGCTTTTGTATTAACCTaGGCACTGCCACAGAATCCT +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSIAFVLT*ALPQNP
Trigger: AGGATTCTGTGGCAGTGCCCAGGTTAATACAAAAGC...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTAGAGCCAATGGGAAGTaGAGATCGACCACAGTGGAG +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSRANGK*RSTTVE
Trigger: CTCCACTGTGGTCGATCTCCACTTCCCATTGGCTCT...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTACTCAGTTCTGAAGGCTaGAAGAGCTCAAGTACTTTG +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVLSSEG*KSSSTL
Trigger: CAAAGTACTTGAGCTCTTCCAGCCTTCAGAACTGAG...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCCTCAGTTCTGAAGGCTaGAAGAGCTCAAGTACTTTG +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSILSSEG*KSSSTL
Trigger: CAAAGTACTTGAGCTCTTCCAGCCTTCAGAACTGAG...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGTTACAGTGGGATGTGTaGCCGAGTAATCTCCCTTGT +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRLQWDV*PSNLPC
Trigger: ACAAGGGAGATTACTCGGCCACACATCCCACTGTAA...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGCTTTGCTGCTGTACTTaGGGAGGTCAAGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRLCCCT*GGQEGC
Trigger: ACAACCTTCTTGACCTCCCCAAGTACAGCAGCAAAG...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
3UTR CAA 72 bp TGCCAAAATAATGGACCCAGACTCAGCTTTTTGGAATaGGGAGTTTCTGAAGCAGTCCTTTCCTCCTTTGGG +
Preference number: 4 (lower is better)
Translates to: CQNNGPRLSFLE*GVSEAVLSSFG
Trigger: CCCAAAGGAGGAAAGGACTGCTTCAGAAACTCCCAATTCCAAAAAGCTGAGTCTGGGTCCATTATTTTGGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000512194.2
CDS-3UTR TCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCGGTTTACCAGCTTCATaGAATATTTCGGGCATACCT +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSIGLPAS*NISGIP
Trigger: AGGTATGCCCGAAATATTTCATGAAGCTGGTAAACC...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGGATGCAAGAACCACATaGGGTAGTCTTCCTGAATGT +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRDARTT*GSLPEC
Trigger: ACATTCAGGAAGACTACCTCATGTGGTTCTTGCATC...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTAAGTATCCTGTATTATTaGTGGTCTAGCCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVSILYY*WSSLHP
Trigger: GGGATGAAGGCTAGACCATCAATAATACAGGATACT...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTATGCTCCACAACCAAATaGATAGATGAGTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVCSTTK*IDESRR
Trigger: TCTTCTGGACTCATCTATGCATTTGGTTGTGGAGCA...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCAGTTATCTAGTACTTTaGTGGGGTTTGTATCCAGCC +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSISYLVL*WGLYPA
Trigger: GGCTGGATACAAACCCCAGCAAAGTACTAGATAACT...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGAGCATGAAGACATTCTaGAGGTTGGCTCCATTGACT +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRSMKTF*RLAPLT
Trigger: AGTCAATGGAGCCAACCTGCAGAATGTCTTCATGCT...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGAGAGCTCAAGTACTTTaGCACCACACACCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRRAQVL*HHTPLG
Trigger: TCCTAAAGGTGTGTGGTGGCAAAGTACTTGAGCTCT...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTTGGGAATCCGATCGCTaGCTGTCAGGAACAAGAGAA +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSWESDR*LSGTRE
Trigger: TTCTCTTGTTCCTGACAGGCAGCGATCGGATTCCCA...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp GGTCCTGTGCTATATGCTAGGTTTACAAAAAGGAAAAGAGTTTGTCTGTGTCCTTCTTGCTCCTGCTTCTaGCATGTGAAGTGTCTGCTC +
Preference number: 4 (lower is better)
Translates to: GPVLYARFTKRKRVCLCPSCSCF*HVKCLL
Trigger: GAGCAGACACTTCACATGGCAGAAGCAGGAGCAAGA...AGGACACAGACAAACTCTTTTCCTTTTTGTAAACCTAGCATATAGCACAGGACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CCA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCATGTTATATAATACTTaGAATCCTGGAGTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: SPFLLWVKGGLQQARGISMLYNT*NPGVGE
Trigger: TTCCCCTACTCCAGGATTCCAAGTATTATATAACAT...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCTATCTAGTACTTTGCTaGGGTTTGTATCCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSIYLVLC*GLYPAE
Trigger: TTCGGCTGGATACAAACCCCAGCAAAGTACTAGATA...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCATTTTGGTCTTGGCTTaGGCATCAAAGATGAAAGGG +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSIILVLA*ASKMKG
Trigger: CCCTTTCATCTTTGATGCCCAAGCCAAGACCAAAAT...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTAATTTTGGTCTTGGCTTaGGCATCAAAGATGAAAGGG +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVILVLA*ASKMKG
Trigger: CCCTTTCATCTTTGATGCCCAAGCCAAGACCAAAAT...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTCTTGTAGAGAGCCAATaGGAAGTGGAGATCGACCAC +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSLVESQ*EVEIDH
Trigger: GTGGTCGATCTCCACTTCCCATTGGCTCTCTACAAG...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGGACTCCTTCCTTCAGTaGGTGACAACTCCTTTAAGT +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRDSFLQ*VTTPLS
Trigger: ACTTAAAGGAGTTGTCACCCACTGAAGGAAGGAGTC...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTAAATCTCCCTTGTAGATaGCAGTCTCTTCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVNLPCR*QSLPVL
Trigger: AAGAACTGGAAGAGACTGCCATCTACAAGGGAGATT...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTAGAGTGCAAGAGGTGGTaGGTCTATCAATTAACCTTA +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVECKRW*VYQLTL
Trigger: TAAGGTTAATTGATAGACCCACCACCTCTTGCACTC...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTCACAGGTCACACACTTaGCATTGGACTAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSHRSHT*HWTRSQ
Trigger: CTGGCTTCTAGTCCAATGCCAAGTGTGTGACCTGTG...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402738.6
CDS-3UTR TCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTCACCTCCACTCTTTGTaGGAACTGCTGTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSHLHSL*ELLCVL
Trigger: AAGAACACACAGCAGTTCTCACAAAGAGTGGAGGTG...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp GGTCCTGTGCTATATGCTAGGTTTACAAAAAGGAAAAGAGTTTGTCTGTGTCCTCACCTCCACTCTTTGTaGGAACTGCTGTGTGTTCTT +
Preference number: 4 (lower is better)
Translates to: GPVLYARFTKRKRVCLCPHLHSL*ELLCVL
Trigger: AAGAACACACAGCAGTTCTCACAAAGAGTGGAGGTG...AGGACACAGACAAACTCTTTTCCTTTTTGTAAACCTAGCATATAGCACAGGACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR TCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGAGTATCCTGTATTATTaGTGGTCTAGCCTTCATCCC +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRSILYY*WSSLHP
Trigger: GGGATGAAGGCTAGACCATCAATAATACAGGATACT...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTAGTTATACCAATCAAGTaGAACCAGTTGTGCTCTACA +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVVIPIK*NQLCST
Trigger: TGTAGAGCACAACTGGTTTCACTTGATTGGTATAAC...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTAAATACTGGACAAGCTaGGAAGCCTCAGGCCAAACT +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSKYWTS*EASGQT
Trigger: AGTTTGGCCTGAGGCTTCTCAGCTTGTCCAGTATTT...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTCCTCAATGTGGACACTaGGGAACGAAGGGAAATACT +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSPQCGH*GTKGNT
Trigger: AGTATTTCCCTTCGTTCCTCAGTGTCCACATTGAGG...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp GGTTACTGTTTCAAACAAATTCCTGATCAAGCCATAAGTGTGTCACTTTATCGACTGACCATCACTCCCTaGACCCCAAGAAAACAGCTG +
Preference number: 4 (lower is better)
Translates to: GYCFKQIPDQAISVSLYRLTITP*TPRKQL
Trigger: CAGCTGTTTTCTTGGGGTGCAGGGAGTGATGGTCAG...TCGATAAAGTGACACACTTATGGCTTGATCAGGAATTTGTTTGAAACAGTAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp ACTTATGATGGTTACTGTTTCAAACAAATTCCTGATCAAGCCATAAGTGTGTCATCACTGAGCCCTAGCTaGCCGGCATTATTCATCCCC +
Preference number: 4 (lower is better)
Translates to: TYDGYCFKQIPDQAISVSSLSPS*PALFIP
Trigger: GGGGATGAATAATGCCGGGCAGCTAGGGCTCAGTGA...TGACACACTTATGGCTTGATCAGGAATTTGTTTGAAACAGTAACCATCATAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTACTAGGGTATGTTGTCTaGCACAAGCAATTTGAGTTA +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVLGYVV*HKQFEL
Trigger: TAACTCAAATTGCTTGTGGCAGACAACATACCCTAG...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTCCATTGACTGCCACCTaGATCTGTAGTTCAGCATCT +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSPLTAT*ICSSAS
Trigger: AGATGCTGAACTACAGATGCAGGTGGCAGTCAATGG...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCCAATATCAGAATGAATaGTCAGCTCTCTTAGGGCAT +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSIQYQNE*SALLGH
Trigger: ATGCCCTAAGAGAGCTGAGCATTCATTCTGATATTG...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTACCACCGGCATCCACTaGTTCTTCACCATCAAAGAT +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSTTGIH*FFTIKD
Trigger: ATCTTTGATGGTGAAGAAGCAGTGGATGCCGGTGGT...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGCAGCCATGGGAAAGTTaGTATTCCCTCAAGAACTTT +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRQPWES*YSLKNF
Trigger: AAAGTTCTTGAGGGAATAGCAACTTTCCCATGGCTG...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTAATAGTTAATGCAACTTaGTCCAAAAGCGAGAGTGCA +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVIVNAT*SKSESA
Trigger: TGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGAATCTCCCTTGTAGATaGCAGTCTCTTCCAGTTCTT +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRNLPCR*QSLPVL
Trigger: AAGAACTGGAAGAGACTGCCATCTACAAGGGAGATT...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTCTTTGCTGCTGTACTTaGGGAGGTCAAGAAGGTTGT +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSLCCCT*GGQEGC
Trigger: ACAACCTTCTTGACCTCCCCAAGTACAGCAGCAAAG...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGTCAGCTTTTTGGAATTaGGAGTTTCTGAAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRSAFWN*EFLKQS
Trigger: GGACTGCTTCAGAAACTCCCAATTCCAAAAAGCTGA...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGGAGTGCAAGAGGTGGTaGGTCTATCAATTAACCTTA +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRECKRW*VYQLTL
Trigger: TAAGGTTAATTGATAGACCCACCACCTCTTGCACTC...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp CAAGGTCTGTGGAAACAAAATAACTGGTATAGTTTGAATGTATGTTCTGGTCAACACTTCTGTCAGATATaGACCCACACACCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: QGLWKQNNWYSLNVCSGQHFCQI*THTPGA
Trigger: AGCCCCAGGTGTGTGGGTTCATATCTGACAGAAGTG...TTGACCAGAACATACATTCAAACTATACCAGTTATTTTGTTTCCACAGACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR TCA 90 bp CAAGGTCTGTGGAAACAAAATAACTGGTATAGTTTGAATGTATGTTCTGGTCAAGCCAAAAACAGCTCCTaGGAGAGACAGGGCAAAGCT +
Preference number: 4 (lower is better)
Translates to: QGLWKQNNWYSLNVCSGQAKNSS*ERQGKA
Trigger: AGCTTTGCCCTGTCTCTCTCAGGAGCTGTTTTTGGC...TTGACCAGAACATACATTCAAACTATACCAGTTATTTTGTTTCCACAGACCTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGAGACAACTTTTTGCGTaGGTAAGAGTTTTACATGGC +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRRQLFA*VRVLHG
Trigger: GCCATGTAAAACTCTTACGCACGCAAAAAGTTGTCT...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTAGCATGAAGACATTCTaGAGGTTGGCTCCATTGACT +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSSMKTF*RLAPLT
Trigger: AGTCAATGGAGCCAACCTGCAGAATGTCTTCATGCT...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTAGAGCTCAAGTACTTTaGCACCACACACCTTTAGGA +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSRAQVL*HHTPLG
Trigger: TCCTAAAGGTGTGTGGTGGCAAAGTACTTGAGCTCT...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTTCAGAATCTCTTTGCTaGTGTACTTGGGGAGGTCAA +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSSESLC*CTWGGQ
Trigger: TTGACCTCCCCAAGTACAGCAGCAAAGAGATTCTGA...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTAAGTTTAAAAATCCACTaGCATTTCATCCAGCAGAGT +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVSLKIH*HFIQQS
Trigger: ACTCTGCTGGATGAAATGGCAGTGGATTTTTAAACT...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp ACTTATGATGGTTACTGTTTCAAACAAATTCCTGATCAAGCCATAAGTGTGTCACTCCACTCTTCCTCTTaGTCCTGCTTCTGCCATGTG +
Preference number: 4 (lower is better)
Translates to: TYDGYCFKQIPDQAISVSLHSSS*SCFCHV
Trigger: CACATGGCAGAAGCAGGAGCAAGAGGAAGAGTGGAG...TGACACACTTATGGCTTGATCAGGAATTTGTTTGAAACAGTAACCATCATAAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CCA 90 bp CAAGGTCTGTGGAAACAAAATAACTGGTATAGTTTGAATGTATGTTCTGGTCAAGGCCCAGTTGCCCCTTaGTGTTCAAACCACATGTGT +
Preference number: 4 (lower is better)
Translates to: QGLWKQNNWYSLNVCSGQGPVAP*CSNHMC
Trigger: ACACATGTGGTTTGAACACCAAGGGGCAACTGGGCC...TTGACCAGAACATACATTCAAACTATACCAGTTATTTTGTTTCCACAGACCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTGCTTTTGTATTAACCTaGGCACTGCCACAGAATCCT +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSAFVLT*ALPQNP
Trigger: AGGATTCTGTGGCAGTGCCCAGGTTAATACAAAAGC...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GGTCCTGTGCTATATGCTAGGTTTACAAAAAGGAAAAGAGTTTGTCTGTGTCCTGCTTTTGTATTAACCTaGGCACTGCCACAGAATCCT +
Preference number: 4 (lower is better)
Translates to: GPVLYARFTKRKRVCLCPAFVLT*ALPQNP
Trigger: AGGATTCTGTGGCAGTGCCCAGGTTAATACAAAAGC...AGGACACAGACAAACTCTTTTCCTTTTTGTAAACCTAGCATATAGCACAGGACC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGCGTAAGAGTTTTACATaGCATGGAGATTCTCGATCT +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRRKSFT*HGDSRS
Trigger: AGATCGAGAATCTCCATGCCATGTAAAACTCTTACG...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCTCTGTTCTAGAATCATaGAGTGCTGAGAGTTCATTA +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSISVLES*SAESSL
Trigger: TAATGAACTCTCAGCACTCCATGATTCTAGAACAGA...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTGGTGAGCTTGACAACTaGGGAATCAGACAACTTTCA +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSGELDN*GIRQLS
Trigger: TGAAAGTTGTCTGATTCCCCAGTTGTCAAGCTCACC...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTATTAAATAGATTCTCATaGCTTCAACATCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVLNRFS*LQHLVV
Trigger: CACCACCAGATGTTGAAGCCATGAGAATCTATTTAA...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTAGAATGTCCACGAGATTaGAAATCTCAGGAATGTAAA +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVECPRD*KSQECK
Trigger: TTTACATTCCTGAGATTTCCAATCTCGTGGACATTC...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTAAAAATAGTTTTACAGTaGGATGTGTGGCCGAGTAAT +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVKIVLQ*DVWPSN
Trigger: ATTACTCGGCCACACATCCCACTGTAAAACTATTTT...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GGTTACTGTTTCAAACAAATTCCTGATCAAGCCATAAGTGTGTCACTTTATCGACACAGGTCACACACTTaGCATTGGACTAGAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GYCFKQIPDQAISVSLYRHRSHT*HWTRSQ
Trigger: CTGGCTTCTAGTCCAATGCCAAGTGTGTGACCTGTG...TCGATAAAGTGACACACTTATGGCTTGATCAGGAATTTGTTTGAAACAGTAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407637.5
3UTR CAA 72 bp CTGGGTTTAAATCCTGCCTCCAGAATCTATGTGATCTaGGGCAAATTACTTGACCTCCTTAAGACTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LGLNPASRIYVI*GKLLDLLKTLF
Trigger: GAACAAAGTCTTAAGGAGGTCAAGTAATTTGCCCAAGATCACATAGATTCTGGAGGCAGGATTTAAACCCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp ACTTATGATGGTTACTGTTTCAAACAAATTCCTGATCAAGCCATAAGTGTGTCATCAGCCACAATTCCCTaGAGGTTGGTGCTGATACCA +
Preference number: 4 (lower is better)
Translates to: TYDGYCFKQIPDQAISVSSATIP*RLVLIP
Trigger: TGGTATCAGCACCAACCTGCAGGGAATTGTGGCTGA...TGACACACTTATGGCTTGATCAGGAATTTGTTTGAAACAGTAACCATCATAAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTCCAAGCAATGCCAGTTaGCACAGGAAACTTGTAATA +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSPSNAS*HRKLVI
Trigger: TATTACAAGTTTCCTGTGGCAACTGGCATTGCTTGG...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp GGTCCTGTGCTATATGCTAGGTTTACAAAAAGGAAAAGAGTTTGTCTGTGTCCTCCAAGCAATGCCAGTTaGCACAGGAAACTTGTAATA +
Preference number: 4 (lower is better)
Translates to: GPVLYARFTKRKRVCLCPPSNAS*HRKLVI
Trigger: TATTACAAGTTTCCTGTGGCAACTGGCATTGCTTGG...AGGACACAGACAAACTCTTTTCCTTTTTGTAAACCTAGCATATAGCACAGGACC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp TTATTAGCAACAACAATAAAATGTATACACCACCACCAAGGTCTGTGGAAACAAGCAAGAGCCAAGCAATaGCAGTTGCCACAGGAAACT +
Preference number: 4 (lower is better)
Translates to: LLATTIKCIHHHQGLWKQARAKQ*QLPQET
Trigger: AGTTTCCTGTGGCAACTGGCATTGCTTGGCTCTTGC...TTGTTTCCACAGACCTTGGTGGTGGTGTATACATTTTATTGTTGTTGCTAATAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTTGCTCCACAACCAAATaGATAGATGAGTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSCSTTK*IDESRR
Trigger: TCTTCTGGACTCATCTATGCATTTGGTTGTGGAGCA...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTAGTTATCTAGTACTTTaGTGGGGTTTGTATCCAGCC +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSSYLVL*WGLYPA
Trigger: GGCTGGATACAAACCCCAGCAAAGTACTAGATAACT...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTTTTCATCCAGCAGAGTaGAACACATTCACAAGTGCA +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSFHPAE*NTFTSA
Trigger: TGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAA...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGGAGTTTTACATGGCATaGAGATTCTCGATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTREFYMA*RFSIFF
Trigger: GAAAAAGATCGAGAATCTCCATGCCATGTAAAACTC...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGTCTGTTCTAGAATCATaGAGTGCTGAGAGTTCATTA +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRSVLES*SAESSL
Trigger: TAATGAACTCTCAGCACTCCATGATTCTAGAACAGA...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGTTAAATAGATTCTCATaGCTTCAACATCTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRLNRFS*LQHLVV
Trigger: CACCACCAGATGTTGAAGCCATGAGAATCTATTTAA...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCATGTTATATAATACTTaGAATCCTGGAGTAGGGGAA +
Preference number: 4 (lower is better)
Translates to: IVNATCSKSESARGGGSIMLYNT*NPGVGE
Trigger: TTCCCCTACTCCAGGATTCCAAGTATTATATAACAT...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTTATCTAGTACTTTGCTaGGGTTTGTATCCAGCCGAA +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSYLVLC*GLYPAE
Trigger: TTCGGCTGGATACAAACCCCAGCAAAGTACTAGATA...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTAAAGTGCAAGGAATACTaGGTAGTTTGGTTTAAAACA +
Preference number: 4 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVKCKEY*VVWFKT
Trigger: TGTTTTAAACCAAACTACCCAGTATTCCTTGCACTT...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTTCAGCTTTTTGGAATTaGGAGTTTCTGAAGCAGTCC +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSSAFWN*EFLKQS
Trigger: GGACTGCTTCAGAAACTCCCAATTCCAAAAAGCTGA...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTAATGATATGCTGATCTaGCAGAGCTCCAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSNDMLI*QSSNLF
Trigger: GAACAAATTGGAGCTCTGGCAGATCAGCATATCATT...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTAGACAACTTTTTGCGTaGGTAAGAGTTTTACATGGC +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSRQLFA*VRVLHG
Trigger: GCCATGTAAAACTCTTACGCACGCAAAAAGTTGTCT...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp GGTCCTGTGCTATATGCTAGGTTTACAAAAAGGAAAAGAGTTTGTCTGTGTCCTAGACAACTTTTTGCGTaGGTAAGAGTTTTACATGGC +
Preference number: 4 (lower is better)
Translates to: GPVLYARFTKRKRVCLCPRQLFA*VRVLHG
Trigger: GCCATGTAAAACTCTTACGCACGCAAAAAGTTGTCT...AGGACACAGACAAACTCTTTTCCTTTTTGTAAACCTAGCATATAGCACAGGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTCAACACATTCACAAGTaGAAGGAATACTGGGTAGTT +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSQHIHK*KEYWVV
Trigger: AACTACCCAGTATTCCTTGCACTTGTGAATGTGTTG...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR GCA 90 bp CAAGGTCTGTGGAAACAAAATAACTGGTATAGTTTGAATGTATGTTCTGGTCAATCTTCCTCTTGCTCCTaGTTCTGCCATGTGAAGTGT +
Preference number: 4 (lower is better)
Translates to: QGLWKQNNWYSLNVCSGQSSSCS*FCHVKC
Trigger: ACACTTCACATGGCAGAAGCAGGAGCAAGAGGAAGA...TTGACCAGAACATACATTCAAACTATACCAGTTATTTTGTTTCCACAGACCTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CCA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGAAGTGCAAGGAATACTaGGTAGTTTGGTTTAAAACA +
Preference number: 4 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRKCKEY*VVWFKT
Trigger: TGTTTTAAACCAAACTACCCAGTATTCCTTGCACTT...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTAAATCAATATCAGAATaGATGCTCAGCTCTCTTAGG +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSKSISE*MLSSLR
Trigger: CCTAAGAGAGCTGAGCATTCATTCTGATATTGATTT...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTGAGTTTTACATGGCATaGAGATTCTCGATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSEFYMA*RFSIFF
Trigger: GAAAAAGATCGAGAATCTCCATGCCATGTAAAACTC...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CCA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTGAATGTCCACGAGATTaGAAATCTCAGGAATGTAAA +
Preference number: 4 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSECPRD*KSQECK
Trigger: TTTACATTCCTGAGATTTCCAATCTCGTGGACATTC...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR TCA 90 bp GGTTACTGTTTCAAACAAATTCCTGATCAAGCCATAAGTGTGTCACTTTATCGAGGTCAAAACTCATGTTaGATTGCAGTAATCCCAATG +
Preference number: 4 (lower is better)
Translates to: GYCFKQIPDQAISVSLYRGQNSC*IAVIPM
Trigger: CATTGGGATTACTGCAATTCAACATGAGTTTTGACC...TCGATAAAGTGACACACTTATGGCTTGATCAGGAATTTGTTTGAAACAGTAACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR TCA 90 bp CAAGGTCTGTGGAAACAAAATAACTGGTATAGTTTGAATGTATGTTCTGGTCAACCTCCAGAATCTATGTaGTCTTGGGCAAATTACTTG +
Preference number: 4 (lower is better)
Translates to: QGLWKQNNWYSLNVCSGQPPESM*SWANYL
Trigger: CAAGTAATTTGCCCAAGATCACATAGATTCTGGAGG...TTGACCAGAACATACATTCAAACTATACCAGTTATTTTGTTTCCACAGACCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR TCA 90 bp CAAGGTCTGTGGAAACAAAATAACTGGTATAGTTTGAATGTATGTTCTGGTCAATCCAAAAATGTCTACTaGGTGACAAGTTCATGCCAG +
Preference number: 4 (lower is better)
Translates to: QGLWKQNNWYSLNVCSGQSKNVY*VTSSCQ
Trigger: CTGGCATGAACTTGTCACTCAGTAGACATTTTTGGA...TTGACCAGAACATACATTCAAACTATACCAGTTATTTTGTTTCCACAGACCTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp CAAGGTCTGTGGAAACAAAATAACTGGTATAGTTTGAATGTATGTTCTGGTCAATGCTCCACAACCAAATaGATAGATGAGTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: QGLWKQNNWYSLNVCSGQCSTTK*IDESRR
Trigger: TCTTCTGGACTCATCTATGCATTTGGTTGTGGAGCA...TTGACCAGAACATACATTCAAACTATACCAGTTATTTTGTTTCCACAGACCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp TTATTAGCAACAACAATAAAATGTATACACCACCACCAAGGTCTGTGGAAACAATGCTCTTTACAGCAATaGAAGAACGGCCTAACACAA +
Preference number: 4 (lower is better)
Translates to: LLATTIKCIHHHQGLWKQCSLQQ*KNGLTQ
Trigger: TTGTGTTAGGCCGTTCTTGCATTGCTGTAAAGAGCA...TTGTTTCCACAGACCTTGGTGGTGGTGTATACATTTTATTGTTGTTGCTAATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp CAAGGTCTGTGGAAACAAAATAACTGGTATAGTTTGAATGTATGTTCTGGTCAATCATGCCAGGTCCTGTaGTATATGCTAGGTTTACAA +
Preference number: 4 (lower is better)
Translates to: QGLWKQNNWYSLNVCSGQSCQVL*YMLGLQ
Trigger: TTGTAAACCTAGCATATAGCACAGGACCTGGCATGA...TTGACCAGAACATACATTCAAACTATACCAGTTATTTTGTTTCCACAGACCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR TCA 90 bp GGTTACTGTTTCAAACAAATTCCTGATCAAGCCATAAGTGTGTCACTTTATCGAGTTTGTCTGTGTCCTTaGGTTTCTTATAATCCAGTA +
Preference number: 4 (lower is better)
Translates to: GYCFKQIPDQAISVSLYRVCLCP*VSYNPV
Trigger: TACTGGATTATAAGAAACTCAAGGACACAGACAAAC...TCGATAAAGTGACACACTTATGGCTTGATCAGGAATTTGTTTGAAACAGTAACC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp ACTTATGATGGTTACTGTTTCAAACAAATTCCTGATCAAGCCATAAGTGTGTCAAATGATATGCTGATCTaGCAGAGCTCCAATTTGTTC +
Preference number: 4 (lower is better)
Translates to: TYDGYCFKQIPDQAISVSNDMLI*QSSNLF
Trigger: GAACAAATTGGAGCTCTGGCAGATCAGCATATCATT...TGACACACTTATGGCTTGATCAGGAATTTGTTTGAAACAGTAACCATCATAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp CAAGGTCTGTGGAAACAAAATAACTGGTATAGTTTGAATGTATGTTCTGGTCAACTAGGGTATGTTGTCTaGCACAAGCAATTTGAGTTA +
Preference number: 4 (lower is better)
Translates to: QGLWKQNNWYSLNVCSGQLGYVV*HKQFEL
Trigger: TAACTCAAATTGCTTGTGGCAGACAACATACCCTAG...TTGACCAGAACATACATTCAAACTATACCAGTTATTTTGTTTCCACAGACCTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CCA 90 bp TTATTAGCAACAACAATAAAATGTATACACCACCACCAAGGTCTGTGGAAACAACACCACCAAGGTCTGTaGAAACAAAATAACTGGTAT +
Preference number: 4 (lower is better)
Translates to: LLATTIKCIHHHQGLWKQHHQGL*KQNNWY
Trigger: ATACCAGTTATTTTGTTTCCACAGACCTTGGTGGTG...TTGTTTCCACAGACCTTGGTGGTGGTGTATACATTTTATTGTTGTTGCTAATAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CCA 90 bp CAAGGTCTGTGGAAACAAAATAACTGGTATAGTTTGAATGTATGTTCTGGTCAAGAGTTTTACATGGCATaGAGATTCTCGATCTTTTTC +
Preference number: 4 (lower is better)
Translates to: QGLWKQNNWYSLNVCSGQEFYMA*RFSIFF
Trigger: GAAAAAGATCGAGAATCTCCATGCCATGTAAAACTC...TTGACCAGAACATACATTCAAACTATACCAGTTATTTTGTTTCCACAGACCTTG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp TTATTAGCAACAACAATAAAATGTATACACCACCACCAAGGTCTGTGGAAACAATGTTATATACCAAAATaGCAACAGCAAAGTAGAGGT +
Preference number: 4 (lower is better)
Translates to: LLATTIKCIHHHQGLWKQCYIPK*QQQSRG
Trigger: ACCTCTACTTTGCTGTTGGCATTTTGGTATATAACA...TTGTTTCCACAGACCTTGGTGGTGGTGTATACATTTTATTGTTGTTGCTAATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR GCA 90 bp TTATTAGCAACAACAATAAAATGTATACACCACCACCAAGGTCTGTGGAAACAAGCACTACATTTCAGATaGTCATATATCCATTCCAAA +
Preference number: 4 (lower is better)
Translates to: LLATTIKCIHHHQGLWKQALHFR*SYIHSK
Trigger: TTTGGAATGGATATATGAGCATCTGAAATGTAGTGC...TTGTTTCCACAGACCTTGGTGGTGGTGTATACATTTTATTGTTGTTGCTAATAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS CCA 90 bp AATATTCCACACCTTGCAGTTCTCGGCAGCAGCCGAACCGCAGCTTaGGACTCCGACTGTCACAGCCCCTCTCGCCGGACCCGGGGTTTC +
Preference number: 5 (lower is better)
Translates to: NIPHLAVLGSSRTAA*DSDCHSPSRRTRGF
Trigger: GAAACCCCGGGTCCGGCGAGAGGGGCTGTGACAGTCGGAGTCCCAAGCTGCGGTTCGGCTGCTGCCGAGAACTGCAAGGTGTGGAATATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402738.6
ENST00000407637.5
ENST00000422770.5
ENST00000431413.5
CDS TCA 90 bp TGTGGGCCACCGGCAAGTACTCCTCCCCGCTGGCTGTGGACTGGATaGCAATCTGCAGACTGGCCATGCCGTAGATGGGAATCCGATCGC +
Preference number: 5 (lower is better)
Translates to: CGPPASTPPRWLWTG*QSADWPCRRWESDR
Trigger: GCGATCGGATTCCCATCTACGGCATGGCCAGTCTGCAGATTGTCATCCAGTCCACAGCCAGCGGGGAGGAGTACTTGCCGGTGGCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS TCA 90 bp CTCAGCTCTCTTAGGGCATCTCCAACAAGGTTGTTCCTGCGAACGTaGAGGACCAGGAAGGGGCTTCTGGCCAGCAGAGGCTCCAGGGTG +
Preference number: 5 (lower is better)
Translates to: LSSLRASPTRLFLRT*RTRKGLLASRGSRV
Trigger: CACCCTGGAGCCTCTGCTGGCCAGAAGCCCCTTCCTGGTCCTTCACGTTCGCAGGAACAACCTTGTTGGAGATGCCCTAAGAGAGCTGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCGGAGTCGTGTCCAAGTaGCCCACAGGAACCAGCGCC +
Preference number: 5 (lower is better)
Translates to: SPFLLWVKGGLQQARGISGVVSK*PTGTSA
Trigger: GGCGCTGGTTCCTGTGGGCAACTTGGACACGACTCC...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp CCTCCCCAGAAGCCAAGCAGATGGCTGCATCATGCTCCCTGTAGAGCCTGCAGATCTCCACTCTTCCTCTaGCTCCTGCTTCTGCCATGT +
Preference number: 5 (lower is better)
Translates to: PPQKPSRWLHHAPCRACRSPLFL*LLLLPC
Trigger: ACATGGCAGAAGCAGGAGCAAGAGGAAGAGTGGAGA...TCTGCAGGCTCTACAGGGAGCATGATGCAGCCATCTGCTTGGCTTCTGGGGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS TCA 90 bp AACCTGGGCACTGCCACAGAATCCTCAGTAGTCATGAGTCCTAGCTaGCCATCACTCCCTGCACCCCAAGAAAACAGCTGGCCTCGGTCA +
Preference number: 5 (lower is better)
Translates to: NLGTATESSVVMSPS*PSLPAPQENSWPRS
Trigger: TGACCGAGGCCAGCTGTTTTCTTGGGGTGCAGGGAGTGATGGTCAGCTAGGACTCATGACTACTGAGGATTCTGTGGCAGTGCCCAGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000407637.5
ENST00000431413.5
ENST00000452979.5
CDS GCA 90 bp CTGTCAGATATGAACCCACACACCTGGGGCTCAGCCACAATTCCCTaGAGGTTGGTGCTGATACCAGGTTGGCCCAGAGACCAATATCCC +
Preference number: 5 (lower is better)
Translates to: LSDMNPHTWGSATIP*RLVLIPGWPRDQYP
Trigger: GGGATATTGGTCTCTGGGCCAACCTGGTATCAGCACCAACCTGCAGGGAATTGTGGCTGAGCCCCAGGTGTGTGGGTTCATATCTGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000407637.5
ENST00000422770.5
ENST00000426683.5
ENST00000431413.5
ENST00000452979.5
CDS GCA 90 bp CAGCTGGCCTCGGTCACTGAGGGCCAGACTGTGGGACTCGCCACATaGCACATGAATGATATGCTGATCTGCCAGAGCTCCAATTTGTTC +
Preference number: 5 (lower is better)
Translates to: QLASVTEGQTVGLAT*HMNDMLICQSSNLF
Trigger: GAACAAATTGGAGCTCTGGCAGATCAGCATATCATTCATGTGGCATGTGGCGAGTCCCACAGTCTGGCCCTCAGTGACCGAGGCCAGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000407637.5
ENST00000426683.5
ENST00000431413.5
ENST00000452979.5
CDS GCA 90 bp AGTTGTCAAGGGCCTGGGTCAGCCGGGCACTCAGAATCTCTTTGCTaGTGTACTTGGGGAGGTCAAGAAGGTTGTAGCAAGTGTGGGCCA +
Preference number: 5 (lower is better)
Translates to: SCQGPGSAGHSESLC*CTWGGQEGCSKCGP
Trigger: TGGCCCACACTTGCTACAACCTTCTTGACCTCCCCAAGTACAGCAGCAAAGAGATTCTGAGTGCCCGGCTGACCCAGGCCCTTGACAACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS TCA 90 bp ACCCACACACCTGGGGCTCAGCCACAATTCCCTGCAGGTTGGTGCTaGTACCAGGTTGGCCCAGAGACCAATATCCCCAACATAACATTG +
Preference number: 5 (lower is better)
Translates to: THTPGAQPQFPAGWC*YQVGPETNIPNITL
Trigger: CAATGTTATGTTGGGGATATTGGTCTCTGGGCCAACCTGGTATCAGCACCAACCTGCAGGGAATTGTGGCTGAGCCCCAGGTGTGTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000407637.5
ENST00000422770.5
ENST00000426683.5
ENST00000431413.5
ENST00000452979.5
CDS GCA 90 bp CTTCTGGCCAGCAGAGGCTCCAGGGTGAGAAGCATGAAGACATTCTaGAGGTTGGCTCCATTGACTGCCACCTGCATCTGTAGTTCAGCA +
Preference number: 5 (lower is better)
Translates to: LLASRGSRVRSMKTF*RLAPLTATCICSSA
Trigger: TGCTGAACTACAGATGCAGGTGGCAGTCAATGGAGCCAACCTGCAGAATGTCTTCATGCTTCTCACCCTGGAGCCTCTGCTGGCCAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS GCA 90 bp AATGAATGCTCAGCTCTCTTAGGGCATCTCCAACAAGGTTGTTCCTaGGAACGTGAAGGACCAGGAAGGGGCTTCTGGCCAGCAGAGGCT +
Preference number: 5 (lower is better)
Translates to: NECSALLGHLQQGCS*EREGPGRGFWPAEA
Trigger: AGCCTCTGCTGGCCAGAAGCCCCTTCCTGGTCCTTCACGTTCGCAGGAACAACCTTGTTGGAGATGCCCTAAGAGAGCTGAGCATTCATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS GCA 90 bp CATAGTTGTCAAGGGCCTGGGTCAGCCGGGCACTCAGAATCTCTTTaGTGCTGTACTTGGGGAGGTCAAGAAGGTTGTAGCAAGTGTGGG +
Preference number: 5 (lower is better)
Translates to: HSCQGPGSAGHSESL*CCTWGGQEGCSKCG
Trigger: CCCACACTTGCTACAACCTTCTTGACCTCCCCAAGTACAGCAGCAAAGAGATTCTGAGTGCCCGGCTGACCCAGGCCCTTGACAACTATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS GCA 90 bp TCACACACTTGGCATTGGACTAGAAGCCAGAAATATTCCACACCTTaGAGTTCTCGGCAGCAGCCGAACCGCAGCTTGGGACTCCGACTG +
Preference number: 5 (lower is better)
Translates to: SHTWHWTRSQKYSTP*SSRQQPNRSLGLRL
Trigger: CAGTCGGAGTCCCAAGCTGCGGTTCGGCTGCTGCCGAGAACTGCAAGGTGTGGAATATTTCTGGCTTCTAGTCCAATGCCAAGTGTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402738.6
ENST00000407637.5
ENST00000422770.5
ENST00000431413.5
CDS CCA 90 bp CAGGCCACTTCCTTGACACTTCTGTCAGATATGAACCCACACACCTaGGGCTCAGCCACAATTCCCTGCAGGTTGGTGCTGATACCAGGT +
Preference number: 5 (lower is better)
Translates to: QATSLTLLSDMNPHT*GSATIPCRLVLIPG
Trigger: ACCTGGTATCAGCACCAACCTGCAGGGAATTGTGGCTGAGCCCCAGGTGTGTGGGTTCATATCTGACAGAAGTGTCAAGGAAGTGGCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000407637.5
ENST00000422770.5
ENST00000426683.5
ENST00000431413.5
ENST00000452979.5
CDS-3UTR CAA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCCCTCTCATGGCCCAGTaGCCCCTTGGTGTTCAAACC +
Preference number: 5 (lower is better)
Translates to: SPFLLWVKGGLQQARGISPLMAQ*PLGVQT
Trigger: GGTTTGAACACCAAGGGGCAACTGGGCCATGAGAGG...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCTGGCCCAGTTGCCCCTaGGTGTTCAAACCACATGTG +
Preference number: 5 (lower is better)
Translates to: SPFLLWVKGGLQQARGISWPSCP*VFKPHV
Trigger: CACATGTGGTTTGAACACCAAGGGGCAACTGGGCCA...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTAGGAGTCGTGTCCAAGTaGCCCACAGGAACCAGCGCC +
Preference number: 5 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVGVVSK*PTGTSA
Trigger: GGCGCTGGTTCCTGTGGGCAACTTGGACACGACTCC...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCCAGCCGAACCGCAGCTaGGGACTCCGACTGTCACAG +
Preference number: 5 (lower is better)
Translates to: IVNATCSKSESARGGGSIQPNRS*GLRLSQ
Trigger: CTGTGACAGTCGGAGTCCCAAGCTGCGGTTCGGCTG...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402738.6
CDS-3UTR CAA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCCATCTGGTGGTGAGCTaGACAACTGGGGAATCAGAC +
Preference number: 5 (lower is better)
Translates to: SPFLLWVKGGLQQARGISHLVVS*TTGESD
Trigger: GTCTGATTCCCCAGTTGTCAAGCTCACCACCAGATG...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCAAGACATTCTGCAGGTaGGCTCCATTGACTGCCACC +
Preference number: 5 (lower is better)
Translates to: SPFLLWVKGGLQQARGISKTFCR*APLTAT
Trigger: GGTGGCAGTCAATGGAGCCAACCTGCAGAATGTCTT...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp GCTCTGAGTTCACATGAGATCTGGTGGTGTAAAAAGTATGGCACCTCCTCTCCATGGCCCAGTTGCCCCTaGGTGTTCAAACCACATGTG +
Preference number: 5 (lower is better)
Translates to: ALSSHEIWWCKKYGTSSPWPSCP*VFKPHV
Trigger: CACATGTGGTTTGAACACCAAGGGGCAACTGGGCCA...TGGAGAGGAGGTGCCATACTTTTTACACCACCAGATCTCATGTGAACTCAGAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CAA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCCCTCTCATGGCCCAGTaGCCCCTTGGTGTTCAAACC +
Preference number: 5 (lower is better)
Translates to: IVNATCSKSESARGGGSIPLMAQ*PLGVQT
Trigger: GGTTTGAACACCAAGGGGCAACTGGGCCATGAGAGG...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCAGCCTTCATCCCTGCTaGATGCAAGAACCACATGAG +
Preference number: 5 (lower is better)
Translates to: SPFLLWVKGGLQQARGISSLHPC*MQEPHE
Trigger: CTCATGTGGTTCTTGCATCAAGCAGGGATGAAGGCT...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCTCTTTGCTGCTGTACTaGGGGAGGTCAAGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: SPFLLWVKGGLQQARGISSLLLY*GRSRRL
Trigger: CAACCTTCTTGACCTCCCCAAGTACAGCAGCAAAGA...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS CCA 90 bp TTTGTTCTGGCTTGTTTCCTTCCCTCTCATGGCCCAGTTGCCCCTTaGTGTTCAAACCACATGTGTAAACTTCCCCATCTTCCAGCAGGA +
Preference number: 5 (lower is better)
Translates to: FVLACFLPSHGPVAP*CSNHMCKLPHLPAG
Trigger: TCCTGCTGGAAGATGGGGAAGTTTACACATGTGGTTTGAACACCAAGGGGCAACTGGGCCATGAGAGGGAAGGAAACAAGCCAGAACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000407637.5
ENST00000422770.5
ENST00000426683.5
ENST00000431413.5
ENST00000452979.5
CDS-3UTR CAA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCGGTGCTGATACCAGGTaGGCCCAGAGACCAATATCC +
Preference number: 5 (lower is better)
Translates to: IVNATCSKSESARGGGSIGADTR*AQRPIS
Trigger: GGATATTGGTCTCTGGGCCAACCTGGTATCAGCACC...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp GCCATGACTGTAAGATTCCTGAGGCCTCCCCAGAAGCCAAGCAGATGGCTGCATTTCCTAATTGACCTCTaGCTCCACAACCAAATGCAT +
Preference number: 5 (lower is better)
Translates to: AMTVRFLRPPQKPSRWLHFLIDL*LHNQMH
Trigger: ATGCATTTGGTTGTGGAGCAAGAGGTCAATTAGGAA...ATGCAGCCATCTGCTTGGCTTCTGGGGAGGCCTCAGGAATCTTACAGTCATGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CAA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTATGCAGGTTGGCTCCATaGACTGCCACCTGCATCTGT +
Preference number: 5 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVCRLAP*TATCIC
Trigger: ACAGATGCAGGTGGCAGTCAATGGAGCCAACCTGCA...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTACGGCAGATCGTGAAGTaGAGGCAGAAAGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVRQIVK*RQKVSS
Trigger: GGAGGAGACTTTCTGCCTCAACTTCACGATCTGCCG...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp GCTCTGAGTTCACATGAGATCTGGTGGTGTAAAAAGTATGGCACCTCCTCTCCAGCAGTAATCCCAATGTaGGAGGTGAGGCATGGTGGT +
Preference number: 5 (lower is better)
Translates to: ALSSHEIWWCKKYGTSSPAVIPM*EVRHGG
Trigger: ACCACCATGCCTCACCTCCAACATTGGGATTACTGC...TGGAGAGGAGGTGCCATACTTTTTACACCACCAGATCTCATGTGAACTCAGAGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS TCA 90 bp GAAATCACTCCCCATGATTTTCTGTATAGGCCTCAATGTGGACACTaGGGAACGAAGGGAAATACTGGACAAGCTGAGAAGCCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: EITPHDFLYRPQCGH*GTKGNTGQAEKPQA
Trigger: GGCCTGAGGCTTCTCAGCTTGTCCAGTATTTCCCTTCGTTCCTCAGTGTCCACATTGAGGCCTATACAGAAAATCATGGGGAGTGATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS GCA 90 bp ACTCTTCTAGGGTTAACCTCATCATTCATGGAGTCGTGTCCAAGTTaGCCACAGGAACCAGCGCCAAAGGTAAACACACCTCCACTCTTT +
Preference number: 5 (lower is better)
Translates to: TLLGLTSSFMESCPS*PQEPAPKVNTPPLF
Trigger: AAAGAGTGGAGGTGTGTTTACCTTTGGCGCTGGTTCCTGTGGGCAACTTGGACACGACTCCATGAATGATGAGGTTAACCCTAGAAGAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000407637.5
CDS CCA 90 bp TGGGGCTCAGCCACAATTCCCTGCAGGTTGGTGCTGATACCAGGTTaGCCCAGAGACCAATATCCCCAACATAACATTGTTCTTATCTTT +
Preference number: 5 (lower is better)
Translates to: WGSATIPCRLVLIPG*PRDQYPQHNIVLIF
Trigger: AAAGATAAGAACAATGTTATGTTGGGGATATTGGTCTCTGGGCCAACCTGGTATCAGCACCAACCTGCAGGGAATTGTGGCTGAGCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000407637.5
ENST00000422770.5
ENST00000426683.5
ENST00000431413.5
ENST00000452979.5
CDS-3UTR CAA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTAACAATTCCCTGCAGGTaGGTGCTGATACCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVTIPCR*VLIPGW
Trigger: CCAACCTGGTATCAGCACCAACCTGCAGGGAATTGT...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGTGCAGGTTGGCTCCATaGACTGCCACCTGCATCTGT +
Preference number: 5 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRCRLAP*TATCIC
Trigger: ACAGATGCAGGTGGCAGTCAATGGAGCCAACCTGCA...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCGCACTCAGAATCTCTTaGCTGCTGTACTTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: IVNATCSKSESARGGGSIALRIS*LLYLGR
Trigger: CCTCCCCAAGTACAGCAGCAAAGAGATTCTGAGTGC...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCCTCAGCTTTTTGGAATaGGGAGTTTCTGAAGCAGTC +
Preference number: 5 (lower is better)
Translates to: SPFLLWVKGGLQQARGISLSFLE*GVSEAV
Trigger: GACTGCTTCAGAAACTCCCAATTCCAAAAAGCTGAG...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCACAGCCATGGGAAAGTaGCTATTCCCTCAAGAACTT +
Preference number: 5 (lower is better)
Translates to: SPFLLWVKGGLQQARGISTAMGK*LFPQEL
Trigger: AAGTTCTTGAGGGAATAGCAACTTTCCCATGGCTGT...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp GCTCTGAGTTCACATGAGATCTGGTGGTGTAAAAAGTATGGCACCTCCTCTCCAGTGTCTGCTCCTTCTTaGCCTTCTGCCATGACTGTA +
Preference number: 5 (lower is better)
Translates to: ALSSHEIWWCKKYGTSSPVSAPS*PSAMTV
Trigger: TACAGTCATGGCAGAAGGCAAAGAAGGAGCAGACAC...TGGAGAGGAGGTGCCATACTTTTTACACCACCAGATCTCATGTGAACTCAGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS CCA 90 bp TTATCTTTCAGGGAATCATGTAGCCACAGGTCACACACTTGGCATTaGACTAGAAGCCAGAAATATTCCACACCTTGCAGTTCTGCCCCC +
Preference number: 5 (lower is better)
Translates to: LSFRESCSHRSHTWH*TRSQKYSTPCSSAP
Trigger: GGGGGCAGAACTGCAAGGTGTGGAATATTTCTGGCTTCTAGTCCAATGCCAAGTGTGTGACCTGTGGCTACATGATTCCCTGAAAGATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000426683.5
CDS-3UTR CAA 90 bp GCTCTGAGTTCACATGAGATCTGGTGGTGTAAAAAGTATGGCACCTCCTCTCCAGCCAAGCAATGCCAGTaGCCACAGGAAACTTGTAAT +
Preference number: 5 (lower is better)
Translates to: ALSSHEIWWCKKYGTSSPAKQCQ*PQETCN
Trigger: ATTACAAGTTTCCTGTGGCAACTGGCATTGCTTGGC...TGGAGAGGAGGTGCCATACTTTTTACACCACCAGATCTCATGTGAACTCAGAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CAA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCTCTGCCACAAGCAATTaGAGTTACTTCACTACCCAT +
Preference number: 5 (lower is better)
Translates to: SPFLLWVKGGLQQARGISSATSN*SYFTTH
Trigger: ATGGGTAGTGAAGTAACTCAAATTGCTTGTGGCAGA...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGCATCTGGTGGTGAGCTaGACAACTGGGGAATCAGAC +
Preference number: 5 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRHLVVS*TTGESD
Trigger: GTCTGATTCCCCAGTTGTCAAGCTCACCACCAGATG...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCAGCCTTCATCCCTGCTaGATGCAAGAACCACATGAG +
Preference number: 5 (lower is better)
Translates to: IVNATCSKSESARGGGSISLHPC*MQEPHE
Trigger: CTCATGTGGTTCTTGCATCAAGCAGGGATGAAGGCT...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp AGTCCTTTCCTCCTTTGGGTTAAAGGAGGGCTGCAACAAGCCAGAGGCATTTCCTGTAACATTTTGGTCTaGGCTTGGGCATCAAAGATG +
Preference number: 5 (lower is better)
Translates to: SPFLLWVKGGLQQARGISCNILV*AWASKM
Trigger: CATCTTTGATGCCCAAGCCAAGACCAAAATGTTACA...GGAAATGCCTCTGGCTTGTTGCAGCCCTCCTTTAACCCAAAGGAGGAAAGGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS TCA 90 bp CAGTGGGTGACAACTCCTTTAAGTCTTCCAAGCCAGGCTTTACATTaGGTAACTTCTTGTAGAGAGCCAATGGGAAGTGGAGATCGACCA +
Preference number: 5 (lower is better)
Translates to: QWVTTPLSLPSQALH*VTSCREPMGSGDRP
Trigger: TGGTCGATCTCCACTTCCCATTGGCTCTCTACAAGAAGTTACTCAATGTAAAGCCTGGCTTGGAAGACTTAAAGGAGTTGTCACCCACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS GCA 90 bp TTGCAGTTTTATTCCCTGGAGCTCATGCTGCATACACATATTCCGTaGACAGTCGCATTAGGTACTGTCTCCATAGGCTCACCTGTTTCA +
Preference number: 5 (lower is better)
Translates to: LQFYSLELMLHTHIP*TVALGTVSIGSPVS
Trigger: TGAAACAGGTGAGCCTATGGAGACAGTACCTAATGCGACTGTGCACGGAATATGTGTATGCAGCATGAGCTCCAGGGAATAAAACTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452979.5
CDS CCA 90 bp TTATCTTTCAGGGAATCATGTAGCCACAGGTCACACACTTGGCATTaGACTAGAAGCCAGAAATATTCCACACCTTGCAGTTCTCGGCAG +
Preference number: 5 (lower is better)
Translates to: LSFRESCSHRSHTWH*TRSQKYSTPCSSRQ
Trigger: CTGCCGAGAACTGCAAGGTGTGGAATATTTCTGGCTTCTAGTCCAATGCCAAGTGTGTGACCTGTGGCTACATGATTCCCTGAAAGATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000402738.6
ENST00000407637.5
CDS-3UTR CAA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTGGTGCTGATACCAGGTaGGCCCAGAGACCAATATCC +
Preference number: 5 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSGADTR*AQRPIS
Trigger: GGATATTGGTCTCTGGGCCAACCTGGTATCAGCACC...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTTGGCCCAGTTGCCCCTaGGTGTTCAAACCACATGTG +
Preference number: 5 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSWPSCP*VFKPHV
Trigger: CACATGTGGTTTGAACACCAAGGGGCAACTGGGCCA...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp CAAGGTCTGTGGAAACAAAATAACTGGTATAGTTTGAATGTATGTTCTGGTCAAGGAGTCGTGTCCAAGTaGCCCACAGGAACCAGCGCC +
Preference number: 5 (lower is better)
Translates to: QGLWKQNNWYSLNVCSGQGVVSK*PTGTSA
Trigger: GGCGCTGGTTCCTGTGGGCAACTTGGACACGACTCC...TTGACCAGAACATACATTCAAACTATACCAGTTATTTTGTTTCCACAGACCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CAA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGGTACTTTGCTGGGGTTaGTATCCAGCCGAAGAATGG +
Preference number: 5 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRVLCWG*YPAEEW
Trigger: CCATTCTTCGGCTGGATACAAACCCCAGCAAAGTAC...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTCGGCAGATCGTGAAGTaGAGGCAGAAAGTCTCCTCC +
Preference number: 5 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSRQIVK*RQKVSS
Trigger: GGAGGAGACTTTCTGCCTCAACTTCACGATCTGCCG...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCAAGAGCTCAAGTACTTaGCCACCACACACCTTTAGG +
Preference number: 5 (lower is better)
Translates to: IVNATCSKSESARGGGSIKSSST*PPHTFR
Trigger: CCTAAAGGTGTGTGGTGGCAAAGTACTTGAGCTCTT...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGTCTTTGCTGCTGTACTaGGGGAGGTCAAGAAGGTTG +
Preference number: 5 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRSLLLY*GRSRRL
Trigger: CAACCTTCTTGACCTCCCCAAGTACAGCAGCAAAGA...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp ACTTATGATGGTTACTGTTTCAAACAAATTCCTGATCAAGCCATAAGTGTGTCACAGCCGAACCGCAGCTaGGGACTCCGACTGTCACAG +
Preference number: 5 (lower is better)
Translates to: TYDGYCFKQIPDQAISVSQPNRS*GLRLSQ
Trigger: CTGTGACAGTCGGAGTCCCAAGCTGCGGTTCGGCTG...TGACACACTTATGGCTTGATCAGGAATTTGTTTGAAACAGTAACCATCATAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS TCA 90 bp AAACATTTCAGGTGCTACTCCCATGAAAGACACTCTCCAAATCACTaGGGAATGGAAGGTTTTTATCTCAGCAAAGTGTCCGGAGCCTGC +
Preference number: 5 (lower is better)
Translates to: KHFRCYSHERHSPNH*GMEGFYLSKVSGAC
Trigger: GCAGGCTCCGGACACTTTGCTGAGATAAAAACCTTCCATTCCTCAGTGATTTGGAGAGTGTCTTTCATGGGAGTAGCACCTGAAATGTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000504994.1
CDS-3UTR CAA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTACAATTCCCTGCAGGTaGGTGCTGATACCAGGTTGG +
Preference number: 5 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSTIPCR*VLIPGW
Trigger: CCAACCTGGTATCAGCACCAACCTGCAGGGAATTGT...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGGCCAAGCAATGCCAGTaGCCACAGGAAACTTGTAAT +
Preference number: 5 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRAKQCQ*PQETCN
Trigger: ATTACAAGTTTCCTGTGGCAACTGGCATTGCTTGGC...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTACATTTTGGTCTTGGCTaGGGCATCAAAGATGAAAGG +
Preference number: 5 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVHFGLG*GIKDER
Trigger: CCTTTCATCTTTGATGCCCAAGCCAAGACCAAAATG...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTAAGACATTCTGCAGGTaGGCTCCATTGACTGCCACC +
Preference number: 5 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSKTFCR*APLTAT
Trigger: GGTGGCAGTCAATGGAGCCAACCTGCAGAATGTCTT...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTGCACTCAGAATCTCTTaGCTGCTGTACTTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSALRIS*LLYLGR
Trigger: CCTCCCCAAGTACAGCAGCAAAGAGATTCTGAGTGC...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTACCCAGACTCAGCTTTTaGGAATTGGGAGTTTCTGAA +
Preference number: 5 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVPRLSF*ELGVSE
Trigger: TTCAGAAACTCCCAATTCCAAAAAGCTGAGTCTGGG...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS CCA 90 bp AATCCTGGAGTAGGGGAAACTCAGGTAGTATTAAATAGATTCTCATaGCTTCAACATCTGGTGGTGAGCTTGACAACTGGGGAATCAGAC +
Preference number: 5 (lower is better)
Translates to: NPGVGETQVVLNRFS*LQHLVVSLTTGESD
Trigger: GTCTGATTCCCCAGTTGTCAAGCTCACCACCAGATGTTGAAGCCATGAGAATCTATTTAATACTACCTGAGTTTCCCCTACTCCAGGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000504994.1
CDS-3UTR CAA 90 bp GGTTACTGTTTCAAACAAATTCCTGATCAAGCCATAAGTGTGTCACTTTATCGAGGTGCTGATACCAGGTaGGCCCAGAGACCAATATCC +
Preference number: 5 (lower is better)
Translates to: GYCFKQIPDQAISVSLYRGADTR*AQRPIS
Trigger: GGATATTGGTCTCTGGGCCAACCTGGTATCAGCACC...TCGATAAAGTGACACACTTATGGCTTGATCAGGAATTTGTTTGAAACAGTAACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CAA 90 bp TTATTAGCAACAACAATAAAATGTATACACCACCACCAAGGTCTGTGGAAACAACCTCTCATGGCCCAGTaGCCCCTTGGTGTTCAAACC +
Preference number: 5 (lower is better)
Translates to: LLATTIKCIHHHQGLWKQPLMAQ*PLGVQT
Trigger: GGTTTGAACACCAAGGGGCAACTGGGCCATGAGAGG...TTGTTTCCACAGACCTTGGTGGTGGTGTATACATTTTATTGTTGTTGCTAATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CAA 90 bp ATAGTTAATGCAACTTGCTCCAAAAGCGAGAGTGCAAGAGGTGGTGGGTCTATCTTCCTAATTGACCTCTaGCTCCACAACCAAATGCAT +
Preference number: 5 (lower is better)
Translates to: IVNATCSKSESARGGGSIFLIDL*LHNQMH
Trigger: ATGCATTTGGTTGTGGAGCAAGAGGTCAATTAGGAA...GATAGACCCACCACCTCTTGCACTCTCGCTTTTGGAGCAAGTTGCATTAACTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp GCCATTTCATCCAGCAGAGTGCAACACATTCACAAGTGCAAGGAATACTGGGTATTCCTAATTGACCTCTaGCTCCACAACCAAATGCAT +
Preference number: 5 (lower is better)
Translates to: AISSSRVQHIHKCKEYWVFLIDL*LHNQMH
Trigger: ATGCATTTGGTTGTGGAGCAAGAGGTCAATTAGGAA...TACCCAGTATTCCTTGCACTTGTGAATGTGTTGCACTCTGCTGGATGAAATGGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTGTACTTTGCTGGGGTTaGTATCCAGCCGAAGAATGG +
Preference number: 5 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSVLCWG*YPAEEW
Trigger: CCATTCTTCGGCTGGATACAAACCCCAGCAAAGTAC...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGCATTTTGGTCTTGGCTaGGGCATCAAAGATGAAAGG +
Preference number: 5 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRHFGLG*GIKDER
Trigger: CCTTTCATCTTTGATGCCCAAGCCAAGACCAAAATG...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGCCCAGACTCAGCTTTTaGGAATTGGGAGTTTCTGAA +
Preference number: 5 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRPRLSF*ELGVSE
Trigger: TTCAGAAACTCCCAATTCCAAAAAGCTGAGTCTGGG...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp GCTCTGAGTTCACATGAGATCTGGTGGTGTAAAAAGTATGGCACCTCCTCTCCAAATGACTGCCTGACTTaGATTTCCAATGAAACCAAG +
Preference number: 5 (lower is better)
Translates to: ALSSHEIWWCKKYGTSSPNDCLT*ISNETK
Trigger: CTTGGTTTCATTGGAAATCAAAGTCAGGCAGTCATT...TGGAGAGGAGGTGCCATACTTTTTACACCACCAGATCTCATGTGAACTCAGAGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS CCA 90 bp TTATCTTTCAGGGAATCATGTAGCCACAGGTCACACACTTGGCATTaGACTAGAAGCCAGAAATATTCCACACCTTGCAGTTTTATTCCC +
Preference number: 5 (lower is better)
Translates to: LSFRESCSHRSHTWH*TRSQKYSTPCSFIP
Trigger: GGGAATAAAACTGCAAGGTGTGGAATATTTCTGGCTTCTAGTCCAATGCCAAGTGTGTGACCTGTGGCTACATGATTCCCTGAAAGATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452979.5
CDS-3UTR CAA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGTCTGCCACAAGCAATTaGAGTTACTTCACTACCCAT +
Preference number: 5 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRSATSN*SYFTTH
Trigger: ATGGGTAGTGAAGTAACTCAAATTGCTTGTGGCAGA...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp AGAGTGCAAGAGGTGGTGGGTCTATCAATTAACCTTATTGTCAAAGGGACAAGGTCCTGCCTGTTATCCTaGCACACAGTTACATTATCT +
Preference number: 5 (lower is better)
Translates to: RVQEVVGLSINLIVKGTRSCLLS*HTVTLS
Trigger: AGATAATGTAACTGTGTGCAAGGATAACAGGCAGGA...CCTTGTCCCTTTGACAATAAGGTTAATTGATAGACCCACCACCTCTTGCACTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTAAGAGCTCAAGTACTTaGCCACCACACACCTTTAGG +
Preference number: 5 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSKSSST*PPHTFR
Trigger: CCTAAAGGTGTGTGGTGGCAAAGTACTTGAGCTCTT...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp GCTCTGAGTTCACATGAGATCTGGTGGTGTAAAAAGTATGGCACCTCCTCTCCATGGTCAAAACTCATGTaGAATTGCAGTAATCCCAAT +
Preference number: 5 (lower is better)
Translates to: ALSSHEIWWCKKYGTSSPWSKLM*NCSNPN
Trigger: ATTGGGATTACTGCAATTCAACATGAGTTTTGACCA...TGGAGAGGAGGTGCCATACTTTTTACACCACCAGATCTCATGTGAACTCAGAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CAA 90 bp GCTCTGAGTTCACATGAGATCTGGTGGTGTAAAAAGTATGGCACCTCCTCTCCAAAAAAGGAAAAGAGTTaGTCTGTGTCCTTGAGTTTC +
Preference number: 5 (lower is better)
Translates to: ALSSHEIWWCKKYGTSSPKKEKS*SVSLSF
Trigger: GAAACTCAAGGACACAGACAAACTCTTTTCCTTTTT...TGGAGAGGAGGTGCCATACTTTTTACACCACCAGATCTCATGTGAACTCAGAGC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS CCA 90 bp GAAACTCATGAAATGTTTCCCAAAATAGTTTTACAGTGGGATGTGTaGCCGAGTAATCTCCCTTGTAGATGGCAGTCTCTTCCAGTTCTT +
Preference number: 5 (lower is better)
Translates to: ETHEMFPKIVLQWDV*PSNLPCRWQSLPVL
Trigger: AAGAACTGGAAGAGACTGCCATCTACAAGGGAGATTACTCGGCCACACATCCCACTGTAAAACTATTTTGGGAAACATTTCATGAGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS TCA 90 bp TCAGTAGATAAAGGACTGCACCTTTATAGAGGTTTACCAGCTTCATaGAATATTTCGGGCATACCTGAGACCACCAGTTATCTAGTACTT +
Preference number: 5 (lower is better)
Translates to: SVDKGLHLYRGLPAS*NISGIPETTSYLVL
Trigger: AAGTACTAGATAACTGGTGGTCTCAGGTATGCCCGAAATATTTCATGAAGCTGGTAAACCTCTATAAAGGTGCAGTCCTTTATCTACTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS TCA 90 bp CCATCAAAGATTACTTTGAGAGGCTTTTTCAAATCAATATCAGAATaGATGCTCAGCTCTCTTAGGGCATCTCCAACAAGGTTGTTCCTG +
Preference number: 5 (lower is better)
Translates to: PSKITLRGFFKSISE*MLSSLRASPTRLFL
Trigger: CAGGAACAACCTTGTTGGAGATGCCCTAAGAGAGCTGAGCATTCATTCTGATATTGATTTGAAAAAGCCTCTCAAAGTAATCTTTGATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp CAAAAAGGTTGTTTACTGCTATACAATCCCAGAAACACATCAACCAGGCTCAGTTCAATCCCAGGGATTTaGGGACTCGTTTTAAAATGT +
Preference number: 5 (lower is better)
Translates to: QKGCLLLYNPRNTSTRLSSIPGI*GLVLKC
Trigger: ACATTTTAAAACGAGTCCCAAAATCCCTGGGATTGA...ACTGAGCCTGGTTGATGTGTTTCTGGGATTGTATAGCAGTAAACAACCTTTTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS-3UTR CAA 90 bp GGTCCTGTGCTATATGCTAGGTTTACAAAAAGGAAAAGAGTTTGTCTGTGTCCTAGAATCTATGTGATCTaGGGCAAATTACTTGACCTC +
Preference number: 5 (lower is better)
Translates to: GPVLYARFTKRKRVCLCPRIYVI*GKLLDL
Trigger: GAGGTCAAGTAATTTGCCCAAGATCACATAGATTCT...AGGACACAGACAAACTCTTTTCCTTTTTGTAAACCTAGCATATAGCACAGGACC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS-3UTR CAA 90 bp CAAGGTCTGTGGAAACAAAATAACTGGTATAGTTTGAATGTATGTTCTGGTCAATCTGCCACAAGCAATTaGAGTTACTTCACTACCCAT +
Preference number: 5 (lower is better)
Translates to: QGLWKQNNWYSLNVCSGQSATSN*SYFTTH
Trigger: ATGGGTAGTGAAGTAACTCAAATTGCTTGTGGCAGA...TTGACCAGAACATACATTCAAACTATACCAGTTATTTTGTTTCCACAGACCTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000407637.5
CDS CCA 72 bp CACCTTGCAGTTCTCGGCAGCAGCCGAACCGCAGCTTaGGACTCCGACTGTCACAGCCCCTCTCGCCGGACC +
Preference number: 6 (lower is better)
Translates to: HLAVLGSSRTAA*DSDCHSPSRRT
Trigger: GGTCCGGCGAGAGGGGCTGTGACAGTCGGAGTCCCAAGCTGCGGTTCGGCTGCTGCCGAGAACTGCAAGGTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402738.6
ENST00000407637.5
ENST00000422770.5
ENST00000431413.5
CDS CAA 72 bp ACACCTTGCAGTTCTCGGCAGCAGCCGAACCGCAGCTaGGGACTCCGACTGTCACAGCCCCTCTCGCCGGAC +
Preference number: 6 (lower is better)
Translates to: TPCSSRQQPNRS*GLRLSQPLSPD
Trigger: GTCCGGCGAGAGGGGCTGTGACAGTCGGAGTCCCAAGCTGCGGTTCGGCTGCTGCCGAGAACTGCAAGGTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000402738.6
ENST00000407637.5
ENST00000422770.5
ENST00000431413.5
CDS CAA 90 bp AAATATTCCACACCTTGCAGTTCTCGGCAGCAGCCGAACCGCAGCTaGGGACTCCGACTGTCACAGCCCCTCTCGCCGGACCCGGGGTTT +
Preference number: 6 (lower is better)
Translates to: KYSTPCSSRQQPNRS*GLRLSQPLSPDPGF
Trigger: AAACCCCGGGTCCGGCGAGAGGGGCTGTGACAGTCGGAGTCCCAAGCTGCGGTTCGGCTGCTGCCGAGAACTGCAAGGTGTGGAATATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000402738.6
ENST00000407637.5
ENST00000422770.5
ENST00000431413.5
CDS GCA 72 bp GGGCCTGGGTCAGCCGGGCACTCAGAATCTCTTTGCTaGTGTACTTGGGGAGGTCAAGAAGGTTGTAGCAAG +
Preference number: 6 (lower is better)
Translates to: GPGSAGHSESLC*CTWGGQEGCSK
Trigger: CTTGCTACAACCTTCTTGACCTCCCCAAGTACAGCAGCAAAGAGATTCTGAGTGCCCGGCTGACCCAGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS CAA 72 bp CCACACACCTGGGGCTCAGCCACAATTCCCTGCAGGTaGGTGCTGATACCAGGTTGGCCCAGAGACCAATAT +
Preference number: 6 (lower is better)
Translates to: PHTWGSATIPCR*VLIPGWPRDQY
Trigger: ATATTGGTCTCTGGGCCAACCTGGTATCAGCACCAACCTGCAGGGAATTGTGGCTGAGCCCCAGGTGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000407637.5
ENST00000422770.5
ENST00000426683.5
ENST00000431413.5
ENST00000452979.5
CDS CAA 90 bp TCTTCCAGCAGGAACACAGAGTGGTTTCCCCCACAGGCCACTTCCTaGACACTTCTGTCAGATATGAACCCACACACCTGGGGCTCAGCC +
Preference number: 6 (lower is better)
Translates to: SSSRNTEWFPPQATS*TLLSDMNPHTWGSA
Trigger: GGCTGAGCCCCAGGTGTGTGGGTTCATATCTGACAGAAGTGTCAAGGAAGTGGCCTGTGGGGGAAACCACTCTGTGTTCCTGCTGGAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000407637.5
ENST00000422770.5
ENST00000426683.5
ENST00000431413.5
ENST00000452979.5
CDS GCA 72 bp TCAGCTCTCTTAGGGCATCTCCAACAAGGTTGTTCCTaGGAACGTGAAGGACCAGGAAGGGGCTTCTGGCCA +
Preference number: 6 (lower is better)
Translates to: SALLGHLQQGCS*EREGPGRGFWP
Trigger: TGGCCAGAAGCCCCTTCCTGGTCCTTCACGTTCGCAGGAACAACCTTGTTGGAGATGCCCTAAGAGAGCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS CAA 90 bp GATATGAACCCACACACCTGGGGCTCAGCCACAATTCCCTGCAGGTaGGTGCTGATACCAGGTTGGCCCAGAGACCAATATCCCCAACAT +
Preference number: 6 (lower is better)
Translates to: DMNPHTWGSATIPCR*VLIPGWPRDQYPQH
Trigger: ATGTTGGGGATATTGGTCTCTGGGCCAACCTGGTATCAGCACCAACCTGCAGGGAATTGTGGCTGAGCCCCAGGTGTGTGGGTTCATATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000407637.5
ENST00000422770.5
ENST00000426683.5
ENST00000431413.5
ENST00000452979.5
CDS GCA 72 bp TGGCATTGGACTAGAAGCCAGAAATATTCCACACCTTaGAGTTCTCGGCAGCAGCCGAACCGCAGCTTGGGA +
Preference number: 6 (lower is better)
Translates to: WHWTRSQKYSTP*SSRQQPNRSLG
Trigger: TCCCAAGCTGCGGTTCGGCTGCTGCCGAGAACTGCAAGGTGTGGAATATTTCTGGCTTCTAGTCCAATGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402738.6
ENST00000407637.5
ENST00000422770.5
ENST00000431413.5
CDS CCA 72 bp TCAGCCGGGCACTCAGAATCTCTTTGCTGCTGTACTTaGGGAGGTCAAGAAGGTTGTAGCAAGTGTGGGCCA +
Preference number: 6 (lower is better)
Translates to: SAGHSESLCCCT*GGQEGCSKCGP
Trigger: TGGCCCACACTTGCTACAACCTTCTTGACCTCCCCAAGTACAGCAGCAAAGAGATTCTGAGTGCCCGGCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS TCA 72 bp ACTGCCACAGAATCCTCAGTAGTCATGAGTCCTAGCTaGCCATCACTCCCTGCACCCCAAGAAAACAGCTGG +
Preference number: 6 (lower is better)
Translates to: TATESSVVMSPS*PSLPAPQENSW
Trigger: CCAGCTGTTTTCTTGGGGTGCAGGGAGTGATGGTCAGCTAGGACTCATGACTACTGAGGATTCTGTGGCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000407637.5
ENST00000426683.5
ENST00000431413.5
ENST00000452979.5
CDS CAA 72 bp GGCTCCAGGGTGAGAAGCATGAAGACATTCTGCAGGTaGGCTCCATTGACTGCCACCTGCATCTGTAGTTCA +
Preference number: 6 (lower is better)
Translates to: GSRVRSMKTFCR*APLTATCICSS
Trigger: TGAACTACAGATGCAGGTGGCAGTCAATGGAGCCAACCTGCAGAATGTCTTCATGCTTCTCACCCTGGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS GCA 72 bp GGGTTAACCTCATCATTCATGGAGTCGTGTCCAAGTTaGCCACAGGAACCAGCGCCAAAGGTAAACACACCT +
Preference number: 6 (lower is better)
Translates to: GLTSSFMESCPS*PQEPAPKVNTP
Trigger: AGGTGTGTTTACCTTTGGCGCTGGTTCCTGTGGGCAACTTGGACACGACTCCATGAATGATGAGGTTAACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000407637.5
CDS CCA 72 bp CTGTTCCCCACCATCATAGCCCTCAGTTCTGAAGGCTaGAAGAGCTCAAGTACTTTGCCACCACACACCTTT +
Preference number: 6 (lower is better)
Translates to: LFPTIIALSSEG*KSSSTLPPHTF
Trigger: AAAGGTGTGTGGTGGCAAAGTACTTGAGCTCTTCCAGCCTTCAGAACTGAGGGCTATGATGGTGGGGAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS CAA 72 bp AGGGTTAACCTCATCATTCATGGAGTCGTGTCCAAGTaGCCCACAGGAACCAGCGCCAAAGGTAAACACACC +
Preference number: 6 (lower is better)
Translates to: RVNLIIHGVVSK*PTGTSAKGKHT
Trigger: GGTGTGTTTACCTTTGGCGCTGGTTCCTGTGGGCAACTTGGACACGACTCCATGAATGATGAGGTTAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000407637.5
CDS CCA 72 bp GCCACAATTCCCTGCAGGTTGGTGCTGATACCAGGTTaGCCCAGAGACCAATATCCCCAACATAACATTGTT +
Preference number: 6 (lower is better)
Translates to: ATIPCRLVLIPG*PRDQYPQHNIV
Trigger: AACAATGTTATGTTGGGGATATTGGTCTCTGGGCCAACCTGGTATCAGCACCAACCTGCAGGGAATTGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000407637.5
ENST00000422770.5
ENST00000426683.5
ENST00000431413.5
ENST00000452979.5
CDS CCA 72 bp GCTTGTTTCCTTCCCTCTCATGGCCCAGTTGCCCCTTaGTGTTCAAACCACATGTGTAAACTTCCCCATCTT +
Preference number: 6 (lower is better)
Translates to: ACFLPSHGPVAP*CSNHMCKLPHL
Trigger: AAGATGGGGAAGTTTACACATGTGGTTTGAACACCAAGGGGCAACTGGGCCATGAGAGGGAAGGAAACAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000407637.5
ENST00000422770.5
ENST00000426683.5
ENST00000431413.5
ENST00000452979.5
CDS CAA 90 bp AACTCTTCTAGGGTTAACCTCATCATTCATGGAGTCGTGTCCAAGTaGCCCACAGGAACCAGCGCCAAAGGTAAACACACCTCCACTCTT +
Preference number: 6 (lower is better)
Translates to: NSSRVNLIIHGVVSK*PTGTSAKGKHTSTL
Trigger: AAGAGTGGAGGTGTGTTTACCTTTGGCGCTGGTTCCTGTGGGCAACTTGGACACGACTCCATGAATGATGAGGTTAACCCTAGAAGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000407637.5
CDS GCA 72 bp ACTGGCCATCAGCCGCAAGAGCCAAGCAATGCCAGTTaGCACAGGAAACTTGTAATATTGTTTGCTGGTTCA +
Preference number: 6 (lower is better)
Translates to: TGHQPQEPSNAS*HRKLVILFAGS
Trigger: TGAACCAGCAAACAATATTACAAGTTTCCTGTGGCAACTGGCATTGCTTGGCTCTTGCGGCTGATGGCCAGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000407637.5
ENST00000452979.5
CDS GCA 72 bp TATTCCCTGGAGCTCATGCTGCATACACATATTCCGTaGACAGTCGCATTAGGTACTGTCTCCATAGGCTCA +
Preference number: 6 (lower is better)
Translates to: YSLELMLHTHIP*TVALGTVSIGS
Trigger: TGAGCCTATGGAGACAGTACCTAATGCGACTGTGCACGGAATATGTGTATGCAGCATGAGCTCCAGGGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000452979.5
CDS TCA 72 bp GTCTGGTCTCCTCCAGAGAAGATCTGCTTAACGATATaGTATTTAAAGCGATCAGCTCGGGCTGAAAGCTGG +
Preference number: 6 (lower is better)
Translates to: VWSPPEKICLTI*YLKRSARAESW
Trigger: CCAGCTTTCAGCCCGAGCTGATCGCTTTAAATATCATATCGTTAAGCAGATCTTCTCTGGAGGAGACCAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS TCA 72 bp TGGACACTGAGGAACGAAGGGAAATACTGGACAAGCTaGGAAGCCTCAGGCCAAACTAAACCCTTCATAGTT +
Preference number: 6 (lower is better)
Translates to: WTLRNEGKYWTS*EASGQTKPFIV
Trigger: AACTATGAAGGGTTTAGTTTGGCCTGAGGCTTCTCAGCTTGTCCAGTATTTCCCTTCGTTCCTCAGTGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS CCA 72 bp TCTTTCAGGGAATCATGTAGCCACAGGTCACACACTTaGCATTGGACTAGAAGCCAGAAATATTCCACACCT +
Preference number: 6 (lower is better)
Translates to: SFRESCSHRSHT*HWTRSQKYSTP
Trigger: AGGTGTGGAATATTTCTGGCTTCTAGTCCAATGCCAAGTGTGTGACCTGTGGCTACATGATTCCCTGAAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000402738.6
ENST00000407637.5
ENST00000426683.5
ENST00000452979.5
CDS CCA 72 bp AGCCAGAAATATTCCACACCTTGCAGTTTTATTCCCTaGAGCTCATGCTGCATACACATATTCCGTGCACAG +
Preference number: 6 (lower is better)
Translates to: SQKYSTPCSFIP*SSCCIHIFRAQ
Trigger: CTGTGCACGGAATATGTGTATGCAGCATGAGCTCCAGGGAATAAAACTGCAAGGTGTGGAATATTTCTGGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000452979.5
CDS CCA 72 bp GTAGGGGAAACTCAGGTAGTATTAAATAGATTCTCATaGCTTCAACATCTGGTGGTGAGCTTGACAACTGGG +
Preference number: 6 (lower is better)
Translates to: VGETQVVLNRFS*LQHLVVSLTTG
Trigger: CCCAGTTGTCAAGCTCACCACCAGATGTTGAAGCCATGAGAATCTATTTAATACTACCTGAGTTTCCCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000504994.1
CDS TCA 72 bp AGGTTTACCAGCTTCATGAAATATTTCGGGCATACCTaGGACCACCAGTTATCTAGTACTTTGCTGGGGTTT +
Preference number: 6 (lower is better)
Translates to: RFTSFMKYFGHT*DHQLSSTLLGF
Trigger: AAACCCCAGCAAAGTACTAGATAACTGGTGGTCTCAGGTATGCCCGAAATATTTCATGAAGCTGGTAAACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS CCA 72 bp GAAATGTTTCCCAAAATAGTTTTACAGTGGGATGTGTaGCCGAGTAATCTCCCTTGTAGATGGCAGTCTCTT +
Preference number: 6 (lower is better)
Translates to: EMFPKIVLQWDV*PSNLPCRWQSL
Trigger: AAGAGACTGCCATCTACAAGGGAGATTACTCGGCCACACATCCCACTGTAAAACTATTTTGGGAAACATTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS CCA 72 bp AATGCAGAATTAACTCACAGGTCACACACTTGGCATTaGACTAGAAGCCAGAAATATTCCACACCTTGCAGT +
Preference number: 6 (lower is better)
Translates to: NAELTHRSHTWH*TRSQKYSTPCS
Trigger: ACTGCAAGGTGTGGAATATTTCTGGCTTCTAGTCCAATGCCAAGTGTGTGACCTGTGAGTTAATTCTGCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000431413.5
CDS TCA 72 bp AAAGGACTGCACCTTTATAGAGGTTTACCAGCTTCATaGAATATTTCGGGCATACCTGAGACCACCAGTTAT +
Preference number: 6 (lower is better)
Translates to: KGLHLYRGLPAS*NISGIPETTSY
Trigger: ATAACTGGTGGTCTCAGGTATGCCCGAAATATTTCATGAAGCTGGTAAACCTCTATAAAGGTGCAGTCCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000264345.7
ENST00000402738.6
ENST00000470815.1
CDS TCA 72 bp AGGGTAGGAACAAAGTGTTACAGTATCCTGTATTATTaGTGGTCTAGCCTTCATCCCTGCTTGATGCAAGAA +
Preference number: 6 (lower is better)
Translates to: RVGTKCYSILYY*WSSLHPCLMQE
Trigger: TTCTTGCATCAAGCAGGGATGAAGGCTAGACCATCAATAATACAGGATACTGTAACACTTTGTTCCTACCCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS TCA 72 bp GAAGCCACTAGAGAAGGCTGTGTACCATTCATGAACTaGGATTTGGAAGACATAATTCACATAAGCATCCAC +
Preference number: 6 (lower is better)
Translates to: EATREGCVPFMN*DLEDIIHISIH
Trigger: GTGGATGCTTATGTGAATTATGTCTTCCAAATCTCAGTTCATGAATGGTACACAGCCTTCTCTAGTGGCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS TCA 72 bp AGGTTTACCAGCTTCATGAAATATTTCGGGCATACCTaGGACCACCAGTTATCTGTTCTAGAATCATGGAGT +
Preference number: 6 (lower is better)
Translates to: RFTSFMKYFGHT*DHQLSVLESWS
Trigger: ACTCCATGATTCTAGAACAGATAACTGGTGGTCTCAGGTATGCCCGAAATATTTCATGAAGCTGGTAAACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000470815.1
CDS CAA 90 bp TTCTCAAATAACACCCTAGTTGAGTTCAGGTCAATCCCAGGGATTTaGGGACTCGTTTTAAAATGTTCATCAATTCTCGTATTTGGAGCA +
Preference number: 6 (lower is better)
Translates to: FSNNTLVEFRSIPGI*GLVLKCSSILVFGA
Trigger: TGCTCCAAATACGAGAATTGATGAACATTTTAAAACGAGTCCCAAAATCCCTGGGATTGACCTGAACTCAACTAGGGTGTTATTTGAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000470815.1
CDS TCA 72 bp ATTACTTTGAGAGGCTTTTTCAAATCAATATCAGAATaGATGCTCAGCTCTCTTAGGGCATCTCCAACAAGG +
Preference number: 6 (lower is better)
Translates to: ITLRGFFKSISE*MLSSLRASPTR
Trigger: CCTTGTTGGAGATGCCCTAAGAGAGCTGAGCATTCATTCTGATATTGATTTGAAAAAGCCTCTCAAAGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6
CDS TCA 72 bp AACAACACCATTGATTGTATTTGCATTGTTGTGTTCTaGGAGTTTTTGTCTCCAAACTGCTATGGTTTCATC +
Preference number: 6 (lower is better)
Translates to: NNTIDCICIVVF*EFLSPNCYGFI
Trigger: GATGAAACCATAGCAGTTTGGAGACAAAAACTCTCAGAACACAACAATGCAAATACAATCAATGGTGTTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000264345.7
ENST00000402738.6