Pregenerated sensors for HEPN1 (Homo sapiens)
Ensembl gene IDs: ENSG00000221932Ensembl transcript IDs: ENST00000408930.6
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | GGGACCTACAAGGTGGTGAGGGAAGGGTACGAGTACATTCCTTTTCCCTCTGACCCGAGCCTGCCAGCTTaGCCTCCTCCCACAGCCTCC | + |
|
Preference number: 2 (lower is better) Translates to: GTYKVVREGYEYIPFPSDPSLPA*PPPTAS Trigger: GGAGGCTGTGGGAGGAGGCCAAGCTGGCAGGCTCGG...GTCAGAGGGAAAAGGAATGTACTCGTACCCTTCCCTCACCACCTTGTAGGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGCACCTGGTACCTGGGGACCTACAAGGTGGTGAGGGAAGGGTACGAGTACCTTTTCCCTCTGACCTaGGCGCTAGCAAGGGCAAAG | + |
|
Preference number: 2 (lower is better) Translates to: LGTWYLGTYKVVREGYEYLFPLT*ALARAK Trigger: CTTTGCCCTTGCTAGCGCCCAGGTCAGAGGGAAAAG...GTACTCGTACCCTTCCCTCACCACCTTGTAGGTCCCCAGGTACCAGGTGCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| 3UTR-3UTR GCA 90 bp | CTGGGGACCTACAAGGTGGTGAGGGAAGGGTACGAGTACATTCCTTTTCCCTCTCTCCTGCCACCCATCTaGCCTGCTCCCACATGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: LGTYKVVREGYEYIPFPSLLPPI*PAPTCS Trigger: TGAGCATGTGGGAGCAGGGCAGATGGGTGGCAGGAG...AGAGGGAAAAGGAATGTACTCGTACCCTTCCCTCACCACCTTGTAGGTCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| 3UTR-3UTR GCA 90 bp | GGGACCTACAAGGTGGTGAGGGAAGGGTACGAGTACATTCCTTTTCCCTCTGACCAAAGAACCCGAGCCTaGCAGCTTGGCCTCCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: GTYKVVREGYEYIPFPSDQRTRA*QLGLLP Trigger: TGGGAGGAGGCCAAGCTGGCAGGCTCGGGTTCTTTG...GTCAGAGGGAAAAGGAATGTACTCGTACCCTTCCCTCACCACCTTGTAGGTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| 3UTR-3UTR GCA 90 bp | CACCTGGTACCTGGGGACCTACAAGGTGGTGAGGGAAGGGTACGAGTACATTCCCTCGGAGGCATGCCATaGCAAGCACTCTTTCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: HLVPGDLQGGEGRVRVHSLGGMP*QALFLS Trigger: AGACAGAAAGAGTGCTTGGCATGGCATGCCTCCGAG...GGAATGTACTCGTACCCTTCCCTCACCACCTTGTAGGTCCCCAGGTACCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGCCACTTTCCCAGAATCCACAGCTGCACTAAGCTAAGGAGAAGCCAGATGTTGCTTCCCAGCATTTaGGGGGAACATGATCCAACC | + |
|
Preference number: 2 (lower is better) Translates to: RGHFPRIHSCTKLRRSQMLLPSI*GEHDPT Trigger: GGTTGGATCATGTTCCCCCCAAATGCTGGGAAGCAA...CATCTGGCTTCTCCTTAGCTTAGTGCAGCTGTGGATTCTGGGAAAGTGGCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| 3UTR-3UTR TCA 90 bp | CACCTGGTACCTGGGGACCTACAAGGTGGTGAGGGAAGGGTACGAGTACATTCCATTCTTATAGAGAAGTaGATTTCACTTACTCCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: HLVPGDLQGGEGRVRVHSILIEK*ISLTPL Trigger: CAGGGGAGTAAGTGAAATTCACTTCTCTATAAGAAT...GGAATGTACTCGTACCCTTCCCTCACCACCTTGTAGGTCCCCAGGTACCAGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| 3UTR-3UTR GCA 90 bp | AACTGTTTTAGCTCATCAAACTCATATATTCCTCCTGGCTTCCTTACAAAACAATGCCCTGCTCCCACATaGTCAGGTCCCAGGGCACAG | + |
|
Preference number: 2 (lower is better) Translates to: NCFSSSNSYIPPGFLTKQCPAPT*SGPRAQ Trigger: CTGTGCCCTGGGACCTGAGCATGTGGGAGCAGGGCA...TTGTTTTGTAAGGAAGCCAGGAGGAATATATGAGTTTGATGAGCTAAAACAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| 3UTR-3UTR CCA 90 bp | AGAGGCCACTTTCCCAGAATCCACAGCTGCACTAAGCTAAGGAGAAGCCAGATGCTCATATATTCCTCCTaGCTTCCTTACAAAACAAGC | + |
|
Preference number: 2 (lower is better) Translates to: RGHFPRIHSCTKLRRSQMLIYSS*LPYKTS Trigger: GCTTGTTTTGTAAGGAAGCCAGGAGGAATATATGAG...CATCTGGCTTCTCCTTAGCTTAGTGCAGCTGTGGATTCTGGGAAAGTGGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| 3UTR-3UTR TCA 90 bp | TCAAACTCATATATTCCTCCTGGCTTCCTTACAAAACAAGCCTTTCAAACAATCCCTCAGGAAAGTTGTTaGGCTTCCTCCAGCTGTGAG | + |
|
Preference number: 2 (lower is better) Translates to: SNSYIPPGFLTKQAFQTIPQESC*ASSSCE Trigger: CTCACAGCTGGAGGAAGCTCAACAACTTTCCTGAGG...GATTGTTTGAAAGGCTTGTTTTGTAAGGAAGCCAGGAGGAATATATGAGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| 3UTR CCA 72 bp | GGGAAGGGTACGAGTACATTCCTTTTCCCTCTGACCTaGGCGCTAGCAAGGGCAAAGAACCCGAGCCTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GKGTSTFLFPLT*ALARAKNPSLP Trigger: TGGCAGGCTCGGGTTCTTTGCCCTTGCTAGCGCCCAGGTCAGAGGGAAAAGGAATGTACTCGTACCCTTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGCACCTGGTACCTGGGGACCTACAAGGTGGTGAGGGAAGGGTACGAGTACTTGTCCTCAGGAAAGTaGTTGAGCTTCCTCCAGCTG | + |
|
Preference number: 3 (lower is better) Translates to: LGTWYLGTYKVVREGYEYLSSGK*LSFLQL Trigger: CAGCTGGAGGAAGCTCAACAACTTTCCTGAGGACAA...GTACTCGTACCCTTCCCTCACCACCTTGTAGGTCCCCAGGTACCAGGTGCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| 3UTR-3UTR CAA 90 bp | CACCTGGTACCTGGGGACCTACAAGGTGGTGAGGGAAGGGTACGAGTACATTCCCCTTTCAAACAATCATaGTCCTCAGGAAAGTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: HLVPGDLQGGEGRVRVHSPFKQS*SSGKLL Trigger: CAACAACTTTCCTGAGGACAATGATTGTTTGAAAGG...GGAATGTACTCGTACCCTTCCCTCACCACCTTGTAGGTCCCCAGGTACCAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR TCA 90 bp | GGGCACCTGGTACCTGGGGACCTACAAGGTGGTGAGGGAAGGGTACGAGTACATCTGGTGCTGAATCCCTaGGGGGCCAGCTTGCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GHLVPGDLQGGEGRVRVHLVLNP*GASLPG Trigger: GCCTGGCAAGCTGGCCCCTCAGGGATTCAGCACCAG...ATGTACTCGTACCCTTCCCTCACCACCTTGTAGGTCCCCAGGTACCAGGTGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR CCA 90 bp | CACCTGGTACCTGGGGACCTACAAGGTGGTGAGGGAAGGGTACGAGTACATTCCCCGAGCCTGCCAGCTTaGCCTCCTCCCACAGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HLVPGDLQGGEGRVRVHSPSLPA*PPPTAS Trigger: GGAGGCTGTGGGAGGAGGCCAAGCTGGCAGGCTCGG...GGAATGTACTCGTACCCTTCCCTCACCACCTTGTAGGTCCCCAGGTACCAGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR GCA 90 bp | GGGCACCTGGTACCTGGGGACCTACAAGGTGGTGAGGGAAGGGTACGAGTACATTGCCCTGCTCCCACATaGTCAGGTCCCAGGGCACAG | + |
|
Preference number: 4 (lower is better) Translates to: GHLVPGDLQGGEGRVRVHCPAPT*SGPRAQ Trigger: CTGTGCCCTGGGACCTGAGCATGTGGGAGCAGGGCA...ATGTACTCGTACCCTTCCCTCACCACCTTGTAGGTCCCCAGGTACCAGGTGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR GCA 90 bp | CTGGGCACCTGGTACCTGGGGACCTACAAGGTGGTGAGGGAAGGGTACGAGTACGCCGGTTACTGGGTGTaGAGGGGCTGTTCTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGTWYLGTYKVVREGYEYAGYWV*RGCSEL Trigger: CAGCTCAGAACAGCCCCTGCACACCCAGTAACCGGC...GTACTCGTACCCTTCCCTCACCACCTTGTAGGTCCCCAGGTACCAGGTGCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR GCA 90 bp | AGTACATTCCTTTTCCCTCTGACCTGGGCGCTAGCAAGGGCAAAGAACCCGAGCCTCCTGCCACCCATCTaGCCTGCTCCCACATGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: STFLFPLTWALARAKNPSLLPPI*PAPTCS Trigger: TGAGCATGTGGGAGCAGGGCAGATGGGTGGCAGGAG...GCTCGGGTTCTTTGCCCTTGCTAGCGCCCAGGTCAGAGGGAAAAGGAATGTACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR TCA 90 bp | ACCTACAAGGTGGTGAGGGAAGGGTACGAGTACATTCCTTTTCCCTCTGACCTGGCCATACCCTGGTGCTaGATCCCTGAGGGGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TYKVVREGYEYIPFPSDLAIPWC*IPEGPA Trigger: AGCTGGCCCCTCAGGGATTCAGCACCAGGGTATGGC...CAGGTCAGAGGGAAAAGGAATGTACTCGTACCCTTCCCTCACCACCTTGTAGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR TCA 90 bp | ACTAAGCTAAGGAGAAGCCAGATGCCGGTTACTGGGTGTGCAGGGGCTGTTCTGTTCCCCAGGCTCATTTaGGCAGGTGTGCCTTCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TKLRRSQMPVTGCAGAVLFPRLI*AGVPSQ Trigger: CTGCGAAGGCACACCTGCTCAAATGAGCCTGGGGAA...CAGAACAGCCCCTGCACACCCAGTAACCGGCATCTGGCTTCTCCTTAGCTTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR TCA 90 bp | CACCTGGTACCTGGGGACCTACAAGGTGGTGAGGGAAGGGTACGAGTACATTCCGGACCTACAAGGTGGTaGGGGAAGGGTACGAGTACA | + |
|
Preference number: 4 (lower is better) Translates to: HLVPGDLQGGEGRVRVHSGPTRW*GKGTST Trigger: TGTACTCGTACCCTTCCCTCACCACCTTGTAGGTCC...GGAATGTACTCGTACCCTTCCCTCACCACCTTGTAGGTCCCCAGGTACCAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR GCA 90 bp | GGGCACCTGGTACCTGGGGACCTACAAGGTGGTGAGGGAAGGGTACGAGTACATGCCTCCAAGGGTCCTTaGATCCCTAGTCTCCTAAAC | + |
|
Preference number: 4 (lower is better) Translates to: GHLVPGDLQGGEGRVRVHASKGP*IPSLLN Trigger: GTTTAGGAGACTAGGGATGCAAGGACCCTTGGAGGC...ATGTACTCGTACCCTTCCCTCACCACCTTGTAGGTCCCCAGGTACCAGGTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR GCA 90 bp | TGCACTAAGCTAAGGAGAAGCCAGATGCCGGTTACTGGGTGTGCAGGGGCTGTTGCCAGGACATGCCCATaGCACCGCCTATTGAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: CTKLRRSQMPVTGCAGAVARTCP*HRLLNS Trigger: ACTGTTCAATAGGCGGTGGCATGGGCATGTCCTGGC...AACAGCCCCTGCACACCCAGTAACCGGCATCTGGCTTCTCCTTAGCTTAGTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR CCA 90 bp | AGTACATTCCTTTTCCCTCTGACCTGGGCGCTAGCAAGGGCAAAGAACCCGAGCCTTTTCCCTCTGACCTaGGCGCTAGCAAGGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: STFLFPLTWALARAKNPSLFPLT*ALARAK Trigger: CTTTGCCCTTGCTAGCGCCCAGGTCAGAGGGAAAAG...GCTCGGGTTCTTTGCCCTTGCTAGCGCCCAGGTCAGAGGGAAAAGGAATGTACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR TCA 90 bp | TGCACTAAGCTAAGGAGAAGCCAGATGCCGGTTACTGGGTGTGCAGGGGCTGTTCCTCAGGAAAGTTGTTaGGCTTCCTCCAGCTGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: CTKLRRSQMPVTGCAGAVPQESC*ASSSCE Trigger: CTCACAGCTGGAGGAAGCTCAACAACTTTCCTGAGG...AACAGCCCCTGCACACCCAGTAACCGGCATCTGGCTTCTCCTTAGCTTAGTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR GCA 90 bp | AGAGGCCACTTTCCCAGAATCCACAGCTGCACTAAGCTAAGGAGAAGCCAGATGCTGAACCCCACAGCATaGCTGTCTCAGCTCCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: RGHFPRIHSCTKLRRSQMLNPTA*LSQLPV Trigger: GACAGGGAGCTGAGACAGGCATGCTGTGGGGTTCAG...CATCTGGCTTCTCCTTAGCTTAGTGCAGCTGTGGATTCTGGGAAAGTGGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR CCA 90 bp | ACTAAGCTAAGGAGAAGCCAGATGCCGGTTACTGGGTGTGCAGGGGCTGTTCTGTTCGCCATCAACCCATaGAGCAATTCCAAGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TKLRRSQMPVTGCAGAVLFAINP*SNSKAP Trigger: TGGGGCCTTGGAATTGCTCCATGGGTTGATGGCGAA...CAGAACAGCCCCTGCACACCCAGTAACCGGCATCTGGCTTCTCCTTAGCTTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR GCA 90 bp | AGTACATTCCTTTTCCCTCTGACCTGGGCGCTAGCAAGGGCAAAGAACCCGAGCTGGATAAGGAGTACCTaGTGGTCAGCCTTGAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: STFLFPLTWALARAKNPSWIRST*WSALRC Trigger: GCATCTCAAGGCTGACCAGCAGGTACTCCTTATCCA...GCTCGGGTTCTTTGCCCTTGCTAGCGCCCAGGTCAGAGGGAAAAGGAATGTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR GCA 90 bp | GGGACCTACAAGGTGGTGAGGGAAGGGTACGAGTACATTCCTTTTCCCTCTGACTCATTTGAGCAGGTGTaGCTTCGCAGCTCCCCTAAA | + |
|
Preference number: 4 (lower is better) Translates to: GTYKVVREGYEYIPFPSDSFEQV*LRSSPK Trigger: TTTAGGGGAGCTGCGAAGGCACACCTGCTCAAATGA...GTCAGAGGGAAAAGGAATGTACTCGTACCCTTCCCTCACCACCTTGTAGGTCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR TCA 90 bp | ACCTACAAGGTGGTGAGGGAAGGGTACGAGTACATTCCTTTTCCCTCTGACCTGAAGGTTAGGGTGAGATaGGAACATGCCATACCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TYKVVREGYEYIPFPSDLKVRVR*EHAIPW Trigger: CCAGGGTATGGCATGTTCTCATCTCACCCTAACCTT...CAGGTCAGAGGGAAAAGGAATGTACTCGTACCCTTCCCTCACCACCTTGTAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR TCA 90 bp | GGGACCTACAAGGTGGTGAGGGAAGGGTACGAGTACATTCCTTTTCCCTCTGACGGGCAATTAAAAAGCTaGAAGAGAAGGAGGCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTYKVVREGYEYIPFPSDGQLKS*KRRRPS Trigger: AGAGGGCCTCCTTCTCTTTCAGCTTTTTAATTGCCC...GTCAGAGGGAAAAGGAATGTACTCGTACCCTTCCCTCACCACCTTGTAGGTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR CCA 90 bp | CACCTGGTACCTGGGGACCTACAAGGTGGTGAGGGAAGGGTACGAGTACATTCCCTCATATATTCCTCCTaGCTTCCTTACAAAACAAGC | + |
|
Preference number: 4 (lower is better) Translates to: HLVPGDLQGGEGRVRVHSLIYSS*LPYKTS Trigger: GCTTGTTTTGTAAGGAAGCCAGGAGGAATATATGAG...GGAATGTACTCGTACCCTTCCCTCACCACCTTGTAGGTCCCCAGGTACCAGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR CCA 90 bp | CAAACAATCATTGTCCTCAGGAAAGTTGTTGAGCTTCCTCCAGCTGTGAGAATATCTTCCCTGGGCACCTaGTACCTGGGGACCTACAAG | + |
|
Preference number: 4 (lower is better) Translates to: QTIIVLRKVVELPPAVRISSLGT*YLGTYK Trigger: CTTGTAGGTCCCCAGGTACCAGGTGCCCAGGGAAGA...TATTCTCACAGCTGGAGGAAGCTCAACAACTTTCCTGAGGACAATGATTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR TCA 90 bp | TCAAACTCATATATTCCTCCTGGCTTCCTTACAAAACAAGCCTTTCAAACAATCTTGCCCCCTCTGCCCTaGACCCCACAGCATGCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SNSYIPPGFLTKQAFQTILPPLP*TPQHAC Trigger: ACAGGCATGCTGTGGGGTTCAGGGCAGAGGGGGCAA...GATTGTTTGAAAGGCTTGTTTTGTAAGGAAGCCAGGAGGAATATATGAGTTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR GCA 90 bp | CTGGCCCGAAAACTAGACCAAATGAGGAACTGTTTTAGCTCATCAAACTCATATCCTCCCTCGGAGGCATaGCATGCCAAGCACTCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: LARKLDQMRNCFSSSNSYPPSEA*HAKHSF Trigger: GAAAGAGTGCTTGGCATGGCATGCCTCCGAGGGAGG...ATATGAGTTTGATGAGCTAAAACAGTTCCTCATTTGGTCTAGTTTTCGGGCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR GCA 90 bp | CTGGCCCGAAAACTAGACCAAATGAGGAACTGTTTTAGCTCATCAAACTCATATTGTGTAGCCAGGACATaGCCATGCCACCGCCTATTG | + |
|
Preference number: 4 (lower is better) Translates to: LARKLDQMRNCFSSSNSYCVART*PCHRLL Trigger: CAATAGGCGGTGGCATGGGCATGTCCTGGCTACACA...ATATGAGTTTGATGAGCTAAAACAGTTCCTCATTTGGTCTAGTTTTCGGGCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGTTGTTGAGCTTCCTCCAGCTGTGAGAATAAGTCCTAATCTCCAGAGATTGCTTCCCAGCATTTaGGGGGAACATGATCCAACC | + |
|
Preference number: 4 (lower is better) Translates to: RKVVELPPAVRISPNLQRLLPSI*GEHDPT Trigger: GGTTGGATCATGTTCCCCCCAAATGCTGGGAAGCAA...TCTCTGGAGATTAGGACTTATTCTCACAGCTGGAGGAAGCTCAACAACTTTCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR CCA 90 bp | TCAAACTCATATATTCCTCCTGGCTTCCTTACAAAACAAGCCTTTCAAACAATCGAAGGCCTTCTTCCCTaGGCACCTGGTACCTGGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SNSYIPPGFLTKQAFQTIEGLLP*APGTWG Trigger: TCCCCAGGTACCAGGTGCCCAGGGAAGAAGGCCTTC...GATTGTTTGAAAGGCTTGTTTTGTAAGGAAGCCAGGAGGAATATATGAGTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR GCA 90 bp | TCAAACTCATATATTCCTCCTGGCTTCCTTACAAAACAAGCCTTTCAAACAATCCTAGTTTGCCCCCTCTaGCCTGAACCCCACAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: SNSYIPPGFLTKQAFQTILVCPL*PEPHSM Trigger: CATGCTGTGGGGTTCAGGGCAGAGGGGGCAAACTAG...GATTGTTTGAAAGGCTTGTTTTGTAAGGAAGCCAGGAGGAATATATGAGTTTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR GCA 90 bp | AACTGTTTTAGCTCATCAAACTCATATATTCCTCCTGGCTTCCTTACAAAACAACAAAGAACCCGAGCCTaGCAGCTTGGCCTCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: NCFSSSNSYIPPGFLTKQQRTRA*QLGLLP Trigger: TGGGAGGAGGCCAAGCTGGCAGGCTCGGGTTCTTTG...TTGTTTTGTAAGGAAGCCAGGAGGAATATATGAGTTTGATGAGCTAAAACAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGTTGTTGAGCTTCCTCCAGCTGTGAGAATAAGTCCTAATCTCCAGAGAATAAGGAGTACCTGCTaGTCAGCCTTGAGATGCACA | + |
|
Preference number: 4 (lower is better) Translates to: RKVVELPPAVRISPNLQRIRSTC*SALRCT Trigger: TGTGCATCTCAAGGCTGACCAGCAGGTACTCCTTAT...TCTCTGGAGATTAGGACTTATTCTCACAGCTGGAGGAAGCTCAACAACTTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR CCA 90 bp | AACTGTTTTAGCTCATCAAACTCATATATTCCTCCTGGCTTCCTTACAAAACAACCAGATGCCGGTTACTaGGTGTGCAGGGGCTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: NCFSSSNSYIPPGFLTKQPDAGY*VCRGCS Trigger: AGAACAGCCCCTGCACACCCAGTAACCGGCATCTGG...TTGTTTTGTAAGGAAGCCAGGAGGAATATATGAGTTTGATGAGCTAAAACAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR TCA 90 bp | TCAAACTCATATATTCCTCCTGGCTTCCTTACAAAACAAGCCTTTCAAACAATCCCTAAACTCCAGCTCTaGTTCGCCATCAACCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SNSYIPPGFLTKQAFQTIPKLQL*FAINPW Trigger: CCATGGGTTGATGGCGAATCAGAGCTGGAGTTTAGG...GATTGTTTGAAAGGCTTGTTTTGTAAGGAAGCCAGGAGGAATATATGAGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR TCA 90 bp | TCAAACTCATATATTCCTCCTGGCTTCCTTACAAAACAAGCCTTTCAAACAATCCATGCCACCGCCTATTaGACAGTTCATAGGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SNSYIPPGFLTKQAFQTIHATAY*TVHRSG Trigger: GCCACTCCTATGAACTGTTCAATAGGCGGTGGCATG...GATTGTTTGAAAGGCTTGTTTTGTAAGGAAGCCAGGAGGAATATATGAGTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR GCA 90 bp | CTGGCCCGAAAACTAGACCAAATGAGGAACTGTTTTAGCTCATCAAACTCATATCCTAAACTTCCCAGGTaGCTCATCCATAATGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: LARKLDQMRNCFSSSNSYPKLPR*LIHNEI Trigger: TATCTCATTATGGATGAGGCACCTGGGAAGTTTAGG...ATATGAGTTTGATGAGCTAAAACAGTTCCTCATTTGGTCTAGTTTTCGGGCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR GCA 90 bp | AACTGTTTTAGCTCATCAAACTCATATATTCCTCCTGGCTTCCTTACAAAACAAGGTGAGATGAGAACATaGCATACCCTGGTGCTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: NCFSSSNSYIPPGFLTKQGEMRT*HTLVLN Trigger: ATTCAGCACCAGGGTATGGCATGTTCTCATCTCACC...TTGTTTTGTAAGGAAGCCAGGAGGAATATATGAGTTTGATGAGCTAAAACAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR CAA 90 bp | AGTACATTCCTTTTCCCTCTGACCTGGGCGCTAGCAAGGGCAAAGAACCCGAGCCCCGAGCCTGCCAGCTaGGCCTCCTCCCACAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: STFLFPLTWALARAKNPSPEPAS*ASSHSL Trigger: GAGGCTGTGGGAGGAGGCCAAGCTGGCAGGCTCGGG...GCTCGGGTTCTTTGCCCTTGCTAGCGCCCAGGTCAGAGGGAAAAGGAATGTACT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR CAA 90 bp | CACCTGGTACCTGGGGACCTACAAGGTGGTGAGGGAAGGGTACGAGTACATTCCAAGAGGCAGCAGGACTaGGATAAGGAGTACCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HLVPGDLQGGEGRVRVHSKRQQD*DKEYLL Trigger: CAGCAGGTACTCCTTATCCAAGTCCTGCTGCCTCTT...GGAATGTACTCGTACCCTTCCCTCACCACCTTGTAGGTCCCCAGGTACCAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS GCA 90 bp | CTCTGTGTATTCCATTCCCTCCTCCTTAATGCCTCCAAGGGTCCTTaGATCCCTAGTCTCCTAAACTCCAGCTCTGATTCGCCATCAACC | + |
|
Preference number: 5 (lower is better) Translates to: LCVFHSLLLNASKGP*IPSLLNSSSDSPST Trigger: GGTTGATGGCGAATCAGAGCTGGAGTTTAGGAGACTAGGGATGCAAGGACCCTTGGAGGCATTAAGGAGGAGGGAATGGAATACACAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR CAA 90 bp | CAAACAATCATTGTCCTCAGGAAAGTTGTTGAGCTTCCTCCAGCTGTGAGAATACTTCCCCAGGCTCATTaGAGCAGGTGTGCCTTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: QTIIVLRKVVELPPAVRILPQAH*SRCAFA Trigger: TGCGAAGGCACACCTGCTCAAATGAGCCTGGGGAAG...TATTCTCACAGCTGGAGGAAGCTCAACAACTTTCCTGAGGACAATGATTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR CAA 90 bp | ACTAAGCTAAGGAGAAGCCAGATGCCGGTTACTGGGTGTGCAGGGGCTGTTCTGCCTTTCAAACAATCATaGTCCTCAGGAAAGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: TKLRRSQMPVTGCAGAVLPFKQS*SSGKLL Trigger: CAACAACTTTCCTGAGGACAATGATTGTTTGAAAGG...CAGAACAGCCCCTGCACACCCAGTAACCGGCATCTGGCTTCTCCTTAGCTTAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS-3UTR CAA 90 bp | CTCATCAAACTCATATATTCCTCCTGGCTTCCTTACAAAACAAGCCTTTCAAACTTGTCCTCAGGAAAGTaGTTGAGCTTCCTCCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: LIKLIYSSWLPYKTSLSNLSSGK*LSFLQL Trigger: CAGCTGGAGGAAGCTCAACAACTTTCCTGAGGACAA...GTTTGAAAGGCTTGTTTTGTAAGGAAGCCAGGAGGAATATATGAGTTTGATGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS CAA 90 bp | ATGCCTGTCTCAGCTCCCTGTCCCTCGGCACTTCCCCAGGCTCATTaGAGCAGGTGTGCCTTCGCAGCTCCCCTAAACTTCCCAGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: MPVSAPCPSALPQAH*SRCAFAAPLNFPGA Trigger: GGCACCTGGGAAGTTTAGGGGAGCTGCGAAGGCACACCTGCTCAAATGAGCCTGGGGAAGTGCCGAGGGACAGGGAGCTGAGACAGGCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS CAA 72 bp | TCAGCTCCCTGTCCCTCGGCACTTCCCCAGGCTCATTaGAGCAGGTGTGCCTTCGCAGCTCCCCTAAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: SAPCPSALPQAH*SRCAFAAPLNF Trigger: GAAGTTTAGGGGAGCTGCGAAGGCACACCTGCTCAAATGAGCCTGGGGAAGTGCCGAGGGACAGGGAGCTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS TCA 72 bp | GAGATGAGAACATGCCATACCCTGGTGCTGAATCCCTaGGGGGCCAGCTTGCCAGGCTTAAGCCAAATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: EMRTCHTLVLNP*GASLPGLSQIC Trigger: GCAGATTTGGCTTAAGCCTGGCAAGCTGGCCCCTCAGGGATTCAGCACCAGGGTATGGCATGTTCTCATCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||
| CDS GCA 72 bp | TTCCATTCCCTCCTCCTTAATGCCTCCAAGGGTCCTTaGATCCCTAGTCTCCTAAACTCCAGCTCTGATTCG | + |
|
Preference number: 6 (lower is better) Translates to: FHSLLLNASKGP*IPSLLNSSSDS Trigger: CGAATCAGAGCTGGAGTTTAGGAGACTAGGGATGCAAGGACCCTTGGAGGCATTAAGGAGGAGGGAATGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000408930.6 |
||