RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HEPACAM2 (Homo sapiens)

Ensembl gene IDs: ENSG00000188175

Ensembl transcript IDs: ENST00000341723.8, ENST00000394468.7, ENST00000440868.5, ENST00000453812.2, ENST00000492616.1

Found 226 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATaGCTCTATTCTGCATGTAAAGGAATAATGAGTAAGAGGTGTTGG +
Preference number: 1 (lower is better)
Translates to: DIVYMLKNLQFNLHK*LYSACKGIMSKRCW
Trigger: CCAACACCTCTTACTCATTATTCCTTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
3UTR-3UTR GCA 90 bp AACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGACCTGCAGTTCAATTTaGATAAATGCCTCTATTCTG +
Preference number: 2 (lower is better)
Translates to: NPCHFRSPRQHENDSPLRTCSSI*INASIL
Trigger: CAGAATAGAGGCATTTATGCAAATTGAACTGCAGGT...CCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
3UTR CAA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTaGCATAAATGCCTCTATTCTGCATGTAAAGGAATAATGAGTAAG +
Preference number: 2 (lower is better)
Translates to: VAQDIVYMLKNLQFN*HKCLYSACKGIMSK
Trigger: CTTACTCATTATTCCTTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
3UTR-3UTR CAA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTAACCTGCAGTTCAATTaGCATAAATGCCTCTATTCT +
Preference number: 3 (lower is better)
Translates to: DSPLRNISPTCFSVAQDINLQFN*HKCLYS
Trigger: AGAATAGAGGCATTTATGCAAATTGAACTGCAGGTT...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp AACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGCACTCTGGATGGTCTTaGTGCTGGGCAGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: NPCHFRSPRQHENDSPLRHSGWS*CWAGMC
Trigger: GCACATCCCTGCCCAGCAGCAAGACCATCCAGAGTG...CCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp AACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGTTCTCCCCGTCAGCATaGGAACGACTCTCCACTGAG +
Preference number: 4 (lower is better)
Translates to: NPCHFRSPRQHENDSPLRFSPSA*ERLSTE
Trigger: CTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAA...CCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp AACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGGAGAAAAGGAGTAGGTaGAGCTGGTGTGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: NPCHFRSPRQHENDSPLREKRSR*SWCGQV
Trigger: GACCTGTCCACACCAGCTCCACCTACTCCTTTTCTC...CCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp AACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGTCCAGGAGTAGGTGTTaGGGGGATGAGAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: NPCHFRSPRQHENDSPLRSRSRC*GDENQQ
Trigger: CTGCTGATTCTCATCCCCCCAACACCTACTCCTGGA...CCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp CGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACAGCCATGGACAGTGTGTaGTGGCACTGTCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: RSPRQHENDSPLRNISPTAMDSV*WHCHLQ
Trigger: CTGAAGGTGACAGTGCCATCACACACTGTCCATGGC...TGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp CGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACAGTGCCCCCTTCCACATaGCATGTCAGGGTCATGTTC +
Preference number: 4 (lower is better)
Translates to: RSPRQHENDSPLRNISPTVPPST*HVRVMF
Trigger: GAACATGACCCTGACATGCCATGTGGAAGGGGGCAC...TGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp TATGAGGAAACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCAGGAGTAGGTGGAGCTaGTGTGGACAGGTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: YEETPVTFVLPVSMRTTLRSRWS*CGQVSH
Trigger: ATGGGAGACCTGTCCACACCAGCTCCACCTACTCCT...GAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTTTCCTCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp TATGAGGAAACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTTTCCATTTCACTaGCAGGGTTCCTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: YEETPVTFVLPVSMRTTLHFPFH*QGSSPG
Trigger: GCCTGGTGAGGAACCCTGTCAGTGAAATGGAAAGTG...GAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTTTCCTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp CGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACAAGGCTGGAACAGACCTaGTTGGGATCCTGGAAACAC +
Preference number: 4 (lower is better)
Translates to: RSPRQHENDSPLRNISPTRLEQT*LGSWKH
Trigger: GTGTTTCCAGGATCCCAAGCAGGTCTGTTCCAGCCT...TGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp TATGAGGAAACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCGAGAAAAGGAGTAGGTaGAGCTGGTGTGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: YEETPVTFVLPVSMRTTLEKRSR*SWCGQV
Trigger: GACCTGTCCACACCAGCTCCACCTACTCCTTTTCTC...GAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTTTCCTCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp CGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATCCAGGAGTAGGTGTTaGGGGGATGAGAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: RSPRQHENDSPLRNISPTSRSRC*GDENQQ
Trigger: CTGCTGATTCTCATCCCCCCAACACCTACTCCTGGA...TGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp CGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATATGATCTGGATGTCTaGTGCTGGAGTGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: RSPRQHENDSPLRNISPTYDLDV*CWSVEA
Trigger: GGCTTCCACACTCCAGCATCAGACATCCAGATCATA...TGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp AACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGAGAGTTCCATTTCCCTaGATGTTGACCTTCACGATG +
Preference number: 4 (lower is better)
Translates to: NPCHFRSPRQHENDSPLRRVPFP*MLTFTM
Trigger: CATCGTGAAGGTCAACATTCAGGGAAATGGAACTCT...CCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp AACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGGTGACTTGTATCTTCTaGCTGGCAGATAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: NPCHFRSPRQHENDSPLRVTCIF*LADRVP
Trigger: TGGAACTCTATCTGCCAGTCAGAAGATACAAGTCAC...CCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp AACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGTGGGCAGGGATGTGCTaGATAACTTCATACACTGTA +
Preference number: 4 (lower is better)
Translates to: NPCHFRSPRQHENDSPLRWAGMC*ITSYTV
Trigger: TACAGTGTATGAAGTTATTCAGCACATCCCTGCCCA...CCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp CCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTTCTCCCCGTCAGCATaGGAACGACTCTCCACTGAG +
Preference number: 4 (lower is better)
Translates to: PRQHENDSPLRNISPTCFFSPSA*ERLSTE
Trigger: CTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAA...AAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp AACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGGTACTGTGCAAATCTTaGCCCGATACACAATCAGAG +
Preference number: 4 (lower is better)
Translates to: NPCHFRSPRQHENDSPLRVLCKS*PDTQSE
Trigger: CTCTGATTGTGTATCGGGGCAAGATTTGCACAGTAC...CCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp CCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTAGGAGTAGGTGGAGCTaGTGTGGACAGGTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: PRQHENDSPLRNISPTCFRSRWS*CGQVSH
Trigger: ATGGGAGACCTGTCCACACCAGCTCCACCTACTCCT...AAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp AACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGTCATACACTGTACTGTaGAAATCTTGCCCCGATACA +
Preference number: 4 (lower is better)
Translates to: NPCHFRSPRQHENDSPLRSYTVL*KSCPDT
Trigger: TGTATCGGGGCAAGATTTGCACAGTACAGTGTATGA...CCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp AACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATAGCCATATGATCTaGATGTCTGATGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: NPCHFRSPRQHENDSPLRNSHMI*MSDAGV
Trigger: CACTCCAGCATCAGACATCCAGATCATATGGCTATT...CCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp CGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACAATCAGGGAACTGCAGTaGGTTGATAAGCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: RSPRQHENDSPLRNISPTIRELQ*VDKQRC
Trigger: GCATCTCTGCTTATCAACCCACTGCAGTTCCCTGAT...TGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp TATGAGGAAACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCATCAGGGAACTGCAGTaGGTTGATAAGCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: YEETPVTFVLPVSMRTTLIRELQ*VDKQRC
Trigger: GCATCTCTGCTTATCAACCCACTGCAGTTCCCTGAT...GAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTTTCCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp CCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTATGATCTGGATGTCTaGTGCTGGAGTGTGGAAGCC +
Preference number: 4 (lower is better)
Translates to: PRQHENDSPLRNISPTCFYDLDV*CWSVEA
Trigger: GGCTTCCACACTCCAGCATCAGACATCCAGATCATA...AAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp AACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGTGGCCTGAAAATGTTTaGGCTTTCCTGTATTCTGTT +
Preference number: 4 (lower is better)
Translates to: NPCHFRSPRQHENDSPLRWPENV*AFLYSV
Trigger: AACAGAATACAGGAAAGCTCAAACATTTTCAGGCCA...CCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp TATGAGGAAACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCGTACTGTTTAGCCCATaGAAGTTCACTCTGGATGGT +
Preference number: 4 (lower is better)
Translates to: YEETPVTFVLPVSMRTTLVLFSP*KFTLDG
Trigger: ACCATCCAGAGTGAACTTTCATGGGCTAAACAGTAC...GAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTTTCCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp CAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTCACCGAAGGGCTCCATaGAAGCATCCTGTCCCATGC +
Preference number: 4 (lower is better)
Translates to: QHENDSPLRNISPTCFSVHRRAP*KHPVPC
Trigger: GCATGGGACAGGATGCTTTCATGGAGCCCTTCGGTG...AACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394468.7
ENST00000453812.2
CDS-3UTR GCA 90 bp AACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACGGTAAGCTAGCCGAGTaGCCCCTTCCACATGGCATG +
Preference number: 4 (lower is better)
Translates to: NDSPLRNISPTCFSVAQDGKLAE*PLPHGM
Trigger: CATGCCATGTGGAAGGGGGCACTCGGCTAGCTTACC...GTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp CAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGGTAAGCTAGCCGAGTaGCCCCTTCCACATGGCATG +
Preference number: 4 (lower is better)
Translates to: QHENDSPLRNISPTCFSVGKLAE*PLPHGM
Trigger: CATGCCATGTGGAAGGGGGCACTCGGCTAGCTTACC...AACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp AACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGTCCCAATGTCTTCCTTaGTTACTGGAGCAATATGAA +
Preference number: 4 (lower is better)
Translates to: NPCHFRSPRQHENDSPLRSQCLP*LLEQYE
Trigger: TTCATATTGCTCCAGTAACCAAGGAAGACATTGGGA...CCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp AACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACGCCATGGACAGTGTGTaGTGGCACTGTCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: NDSPLRNISPTCFSVAQDAMDSV*WHCHLQ
Trigger: CTGAAGGTGACAGTGCCATCACACACTGTCCATGGC...GTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp CGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATGCCATGGACAGTGTGTaGTGGCACTGTCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: RLSTEEYFPNMFFCCTRHAMDSV*WHCHLQ
Trigger: CTGAAGGTGACAGTGCCATCACACACTGTCCATGGC...ATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp CCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTGGGTGGCATCATGGTaGACTTGTGTTGGTATTCCA +
Preference number: 4 (lower is better)
Translates to: PRQHENDSPLRNISPTCFWVASW*TCVGIP
Trigger: TGGAATACCAACACAAGTTCACCATGATGCCACCCA...AAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp TATGAGGAAACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCGTTACTGGAGCAATATaGAGGGTATTGTTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: YEETPVTFVLPVSMRTTLVTGAI*RVLFWG
Trigger: TCCCCAAAACAATACCCTTCATATTGCTCCAGTAAC...GAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTTTCCTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp CGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACAAGCATCTTCATGGCCTaGAAATGTTTGAGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: RSPRQHENDSPLRNISPTSIFMA*KCLSFP
Trigger: AGGAAAGCTCAAACATTTTCAGGCCATGAAGATGCT...TGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTCACCGAAGGGCTCCATaGAAGCATCCTGTCCCATGC +
Preference number: 4 (lower is better)
Translates to: DSPLRNISPTCFSVAQDIHRRAP*KHPVPC
Trigger: GCATGGGACAGGATGCTTTCATGGAGCCCTTCGGTG...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000394468.7
ENST00000453812.2
CDS-3UTR GCA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTGGTAAGCTAGCCGAGTaGCCCCTTCCACATGGCATG +
Preference number: 4 (lower is better)
Translates to: DSPLRNISPTCFSVAQDIGKLAE*PLPHGM
Trigger: CATGCCATGTGGAAGGGGGCACTCGGCTAGCTTACC...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp CGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATCATACACTGTACTGTaGAAATCTTGCCCCGATACA +
Preference number: 4 (lower is better)
Translates to: RSPRQHENDSPLRNISPTSYTVL*KSCPDT
Trigger: TGTATCGGGGCAAGATTTGCACAGTACAGTGTATGA...TGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTCACTCTGGATGGTCTTaGTGCTGGGCAGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: DSPLRNISPTCFSVAQDIHSGWS*CWAGMC
Trigger: GCACATCCCTGCCCAGCAGCAAGACCATCCAGAGTG...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp AACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACGTGCCCCCTTCCACATaGCATGTCAGGGTCATGTTC +
Preference number: 4 (lower is better)
Translates to: NDSPLRNISPTCFSVAQDVPPST*HVRVMF
Trigger: GAACATGACCCTGACATGCCATGTGGAAGGGGGCAC...GTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp CCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTACCTGCTTGGGATCCTaGAAACACCAGAAACATCTG +
Preference number: 4 (lower is better)
Translates to: PRQHENDSPLRNISPTCFTCLGS*KHQKHL
Trigger: CAGATGTTTCTGGTGTTTCCAGGATCCCAAGCAGGT...AAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCAGAGGGCCTGACCTCTaGCGCCATGGACAGTGTGTG +
Preference number: 4 (lower is better)
Translates to: AQDIVYMLKNLQFNLHKCRGPDL*RHGQCV
Trigger: CACACACTGTCCATGGCGTCAGAGGTCAGGCCCTCT...GCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp CCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTGTGACTTGTATCTTCTaGCTGGCAGATAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: PRQHENDSPLRNISPTCFVTCIF*LADRVP
Trigger: TGGAACTCTATCTGCCAGTCAGAAGATACAAGTCAC...AAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp AACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACCACTTTCCATTTCACTaGCAGGGTTCCTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: NDSPLRNISPTCFSVAQDHFPFH*QGSSPG
Trigger: GCCTGGTGAGGAACCCTGTCAGTGAAATGGAAAGTG...GTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp CCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTCCTTCACGATGTAATTaGCTTCATCAGGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: PRQHENDSPLRNISPTCFPSRCN*LHQGTA
Trigger: TGCAGTTCCCTGATGAAGGCAATTACATCGTGAAGG...AAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp AACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACAGGCTGGAACAGACCTaGTTGGGATCCTGGAAACAC +
Preference number: 4 (lower is better)
Translates to: NDSPLRNISPTCFSVAQDRLEQT*LGSWKH
Trigger: GTGTTTCCAGGATCCCAAGCAGGTCTGTTCCAGCCT...GTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp CAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTAGGCTGGAACAGACCTaGTTGGGATCCTGGAAACAC +
Preference number: 4 (lower is better)
Translates to: QHENDSPLRNISPTCFSVRLEQT*LGSWKH
Trigger: GTGTTTCCAGGATCCCAAGCAGGTCTGTTCCAGCCT...AACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTGTGCCCCCTTCCACATaGCATGTCAGGGTCATGTTC +
Preference number: 4 (lower is better)
Translates to: DSPLRNISPTCFSVAQDIVPPST*HVRVMF
Trigger: GAACATGACCCTGACATGCCATGTGGAAGGGGGCAC...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp TATGAGGAAACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCGTCTTCCTTGGTTACTaGAGCAATATGAAGGGTATT +
Preference number: 4 (lower is better)
Translates to: YEETPVTFVLPVSMRTTLVFLGY*SNMKGI
Trigger: AATACCCTTCATATTGCTCCAGTAACCAAGGAAGAC...GAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTTTCCTCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp CGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATCTAAGCGAGGCCCATaGTTAATGATATATGTAGTA +
Preference number: 4 (lower is better)
Translates to: RSPRQHENDSPLRNISPTSKRGP*LMIYVV
Trigger: TACTACATATATCATTAAGCATGGGCCTCGCTTAGA...TGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp CCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTAATAGCCATATGATCTaGATGTCTGATGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: PRQHENDSPLRNISPTCFNSHMI*MSDAGV
Trigger: CACTCCAGCATCAGACATCCAGATCATATGGCTATT...AAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp CGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTGGAACAGACCTGCTTaGGATCCTGGAAACACCAGA +
Preference number: 4 (lower is better)
Translates to: RLSTEEYFPNMFFCCTRHWNRPA*DPGNTR
Trigger: TCTGGTGTTTCCAGGATCCCAAGCAGGTCTGTTCCA...ATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp CAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTTGGAACAGACCTGCTTaGGATCCTGGAAACACCAGA +
Preference number: 4 (lower is better)
Translates to: QHENDSPLRNISPTCFSVWNRPA*DPGNTR
Trigger: TCTGGTGTTTCCAGGATCCCAAGCAGGTCTGTTCCA...AACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp CGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATCATGAAAGTTCACTCTaGATGGTCTTGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: RLSTEEYFPNMFFCCTRHHESSL*MVLLLG
Trigger: GCCCAGCAGCAAGACCATCCAGAGTGAACTTTCATG...ATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp CAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTTGGGTGGCATCATGGTaGACTTGTGTTGGTATTCCA +
Preference number: 4 (lower is better)
Translates to: QHENDSPLRNISPTCFSVWVASW*TCVGIP
Trigger: TGGAATACCAACACAAGTTCACCATGATGCCACCCA...AACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCTTCTCCCCGTCAGCATaGGAACGACTCTCCACTGAG +
Preference number: 4 (lower is better)
Translates to: AQDIVYMLKNLQFNLHKCFSPSA*ERLSTE
Trigger: CTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAA...GCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATTCTCCCCGTCAGCATaGGAACGACTCTCCACTGAG +
Preference number: 4 (lower is better)
Translates to: VYMLKNLQFNLHKCLYSAFSPSA*ERLSTE
Trigger: CTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAA...TGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp TATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTGGTAAGCTAGCCGAGTaGCCCCTTCCACATGGCATG +
Preference number: 4 (lower is better)
Translates to: YMLKNLQFNLHKCLYSACGKLAE*PLPHGM
Trigger: CATGCCATGTGGAAGGGGGCACTCGGCTAGCTTACC...ACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAACACTCTGGATGGTCTTaGTGCTGGGCAGGGATGTGC +
Preference number: 4 (lower is better)
Translates to: VAQDIVYMLKNLQFNLHKHSGWS*CWAGMC
Trigger: GCACATCCCTGCCCAGCAGCAAGACCATCCAGAGTG...TTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp CGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATAGCCCAGTAAGTATTTaGGCATTGTGTGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: RLSTEEYFPNMFFCCTRHSPVSI*ALCGVS
Trigger: AGAGACCCCACACAATGCCCAAATACTTACTGGGCT...ATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp GCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCAGGAGTAGGTGGAGCTaGTGTGGACAGGTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: AQDIVYMLKNLQFNLHKCRSRWS*CGQVSH
Trigger: ATGGGAGACCTGTCCACACCAGCTCCACCTACTCCT...GCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp GTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCAAGGAGTAGGTGGAGCTaGTGTGGACAGGTCTCCCAT +
Preference number: 4 (lower is better)
Translates to: VYMLKNLQFNLHKCLYSARSRWS*CGQVSH
Trigger: ATGGGAGACCTGTCCACACCAGCTCCACCTACTCCT...TGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp CCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTGTCTTCCTTGGTTACTaGAGCAATATGAAGGGTATT +
Preference number: 4 (lower is better)
Translates to: PRQHENDSPLRNISPTCFVFLGY*SNMKGI
Trigger: AATACCCTTCATATTGCTCCAGTAACCAAGGAAGAC...AAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp CAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTACCTGCTTGGGATCCTaGAAACACCAGAAACATCTG +
Preference number: 4 (lower is better)
Translates to: QHENDSPLRNISPTCFSVTCLGS*KHQKHL
Trigger: CAGATGTTTCTGGTGTTTCCAGGATCCCAAGCAGGT...AACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp CGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATACCTGCTTGGGATCCTaGAAACACCAGAAACATCTG +
Preference number: 4 (lower is better)
Translates to: RLSTEEYFPNMFFCCTRHTCLGS*KHQKHL
Trigger: CAGATGTTTCTGGTGTTTCCAGGATCCCAAGCAGGT...ATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp CGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTACACAATCAGAGGCTaGAACAGACCTGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: RLSTEEYFPNMFFCCTRHYTIRG*NRPAWD
Trigger: ATCCCAAGCAGGTCTGTTCCAGCCTCTGATTGTGTA...ATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAAGCCATGGACAGTGTGTaGTGGCACTGTCACCTTCAG +
Preference number: 4 (lower is better)
Translates to: VAQDIVYMLKNLQFNLHKAMDSV*WHCHLQ
Trigger: CTGAAGGTGACAGTGCCATCACACACTGTCCATGGC...TTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp AACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACAGAGTTCCATTTCCCTaGATGTTGACCTTCACGATG +
Preference number: 4 (lower is better)
Translates to: NDSPLRNISPTCFSVAQDRVPFP*MLTFTM
Trigger: CATCGTGAAGGTCAACATTCAGGGAAATGGAACTCT...GTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp CAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTAGAGTTCCATTTCCCTaGATGTTGACCTTCACGATG +
Preference number: 4 (lower is better)
Translates to: QHENDSPLRNISPTCFSVRVPFP*MLTFTM
Trigger: CATCGTGAAGGTCAACATTCAGGGAAATGGAACTCT...AACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp AACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACGTGACTTGTATCTTCTaGCTGGCAGATAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: NDSPLRNISPTCFSVAQDVTCIF*LADRVP
Trigger: TGGAACTCTATCTGCCAGTCAGAAGATACAAGTCAC...GTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp CGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTGGGCAGGGATGTGCTaGATAACTTCATACACTGTA +
Preference number: 4 (lower is better)
Translates to: RLSTEEYFPNMFFCCTRHWAGMC*ITSYTV
Trigger: TACAGTGTATGAAGTTATTCAGCACATCCCTGCCCA...ATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp AACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACGTACTGTTTAGCCCATaGAAGTTCACTCTGGATGGT +
Preference number: 4 (lower is better)
Translates to: NDSPLRNISPTCFSVAQDVLFSP*KFTLDG
Trigger: ACCATCCAGAGTGAACTTTCATGGGCTAAACAGTAC...GTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp CGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATGTTGATAAGCAGAGATaGATTGGGTGGCATCATGGT +
Preference number: 4 (lower is better)
Translates to: RLSTEEYFPNMFFCCTRHVDKQR*IGWHHG
Trigger: ACCATGATGCCACCCAATGCATCTCTGCTTATCAAC...ATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTCCTTCATCAGGGAACTaGAGTGGGTTGATAAGCAGA +
Preference number: 4 (lower is better)
Translates to: DSPLRNISPTCFSVAQDIPSSGN*SGLISR
Trigger: TCTGCTTATCAACCCACTGCAGTTCCCTGATGAAGG...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp AACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACCCTTCACGATGTAATTaGCTTCATCAGGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: NDSPLRNISPTCFSVAQDPSRCN*LHQGTA
Trigger: TGCAGTTCCCTGATGAAGGCAATTACATCGTGAAGG...GTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp CAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGTACTGTGCAAATCTTaGCCCGATACACAATCAGAG +
Preference number: 4 (lower is better)
Translates to: QHENDSPLRNISPTCFSVVLCKS*PDTQSE
Trigger: CTCTGATTGTGTATCGGGGCAAGATTTGCACAGTAC...AACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTATCAGGGAACTGCAGTaGGTTGATAAGCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: DSPLRNISPTCFSVAQDIIRELQ*VDKQRC
Trigger: GCATCTCTGCTTATCAACCCACTGCAGTTCCCTGAT...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAAGTGCCCCCTTCCACATaGCATGTCAGGGTCATGTTC +
Preference number: 4 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKVPPST*HVRVMF
Trigger: GAACATGACCCTGACATGCCATGTGGAAGGGGGCAC...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTTACACAATCAGAGGCTaGAACAGACCTGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: DSPLRNISPTCFSVAQDIYTIRG*NRPAWD
Trigger: ATCCCAAGCAGGTCTGTTCCAGCCTCTGATTGTGTA...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTGTGACTTGTATCTTCTaGCTGGCAGATAGAGTTCCA +
Preference number: 4 (lower is better)
Translates to: DSPLRNISPTCFSVAQDIVTCIF*LADRVP
Trigger: TGGAACTCTATCTGCCAGTCAGAAGATACAAGTCAC...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp CGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATGTTACTGGAGCAATATaGAGGGTATTGTTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: RLSTEEYFPNMFFCCTRHVTGAI*RVLFWG
Trigger: TCCCCAAAACAATACCCTTCATATTGCTCCAGTAAC...ATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAACACTTTCCATTTCACTaGCAGGGTTCCTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKHFPFH*QGSSPG
Trigger: GCCTGGTGAGGAACCCTGTCAGTGAAATGGAAAGTG...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAACACTTTCCATTTCACTaGCAGGGTTCCTCACCAGGC +
Preference number: 4 (lower is better)
Translates to: VAQDIVYMLKNLQFNLHKHFPFH*QGSSPG
Trigger: GCCTGGTGAGGAACCCTGTCAGTGAAATGGAAAGTG...TTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTTGGGCAGGGATGTGCTaGATAACTTCATACACTGTA +
Preference number: 4 (lower is better)
Translates to: DSPLRNISPTCFSVAQDIWAGMC*ITSYTV
Trigger: TACAGTGTATGAAGTTATTCAGCACATCCCTGCCCA...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTGTACTGTTTAGCCCATaGAAGTTCACTCTGGATGGT +
Preference number: 4 (lower is better)
Translates to: DSPLRNISPTCFSVAQDIVLFSP*KFTLDG
Trigger: ACCATCCAGAGTGAACTTTCATGGGCTAAACAGTAC...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp CAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGAGTTTCATCTTGCCTaGCGGTTATGTTGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: QHENDSPLRNISPTCFSVEFHLA*RLCCCK
Trigger: CTTACAACAACATAACCGGCAGGCAAGATGAAACTC...AACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAAAGGCTGGAACAGACCTaGTTGGGATCCTGGAAACAC +
Preference number: 4 (lower is better)
Translates to: VAQDIVYMLKNLQFNLHKRLEQT*LGSWKH
Trigger: GTGTTTCCAGGATCCCAAGCAGGTCTGTTCCAGCCT...TTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp CAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGAAGGAGGTATATTTTaGACTGAAAGACCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: QHENDSPLRNISPTCFSVEGGIF*TERPQV
Trigger: CACTTGGGGTCTTTCAGTGCAAAATATACCTCCTTC...AACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000394468.7
ENST00000453812.2
CDS-3UTR CCA 90 bp TATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTGAGAAAAGGAGTAGGTaGAGCTGGTGTGGACAGGTC +
Preference number: 4 (lower is better)
Translates to: YMLKNLQFNLHKCLYSACEKRSR*SWCGQV
Trigger: GACCTGTCCACACCAGCTCCACCTACTCCTTTTCTC...ACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp TATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTTCCAGGAGTAGGTGTTaGGGGGATGAGAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: YMLKNLQFNLHKCLYSACSRSRC*GDENQQ
Trigger: CTGCTGATTCTCATCCCCCCAACACCTACTCCTGGA...ACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAATCCAGGAGTAGGTGTTaGGGGGATGAGAATCAGCAG +
Preference number: 4 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKSRSRC*GDENQQ
Trigger: CTGCTGATTCTCATCCCCCCAACACCTACTCCTGGA...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp GTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCACATGAAAGTTCACTCTaGATGGTCTTGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: VYMLKNLQFNLHKCLYSAHESSL*MVLLLG
Trigger: GCCCAGCAGCAAGACCATCCAGAGTGAACTTTCATG...TGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGGGTGGCATCATGGTaGACTTGTGTTGGTATTCCA +
Preference number: 4 (lower is better)
Translates to: VYMLKNLQFNLHKCLYSAWVASW*TCVGIP
Trigger: TGGAATACCAACACAAGTTCACCATGATGCCACCCA...TGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp CAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTTGGCCTGAAAATGTTTaGGCTTTCCTGTATTCTGTT +
Preference number: 4 (lower is better)
Translates to: QHENDSPLRNISPTCFSVWPENV*AFLYSV
Trigger: AACAGAATACAGGAAAGCTCAAACATTTTCAGGCCA...AACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTGAGTTTCATCTTGCCTaGCGGTTATGTTGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: DSPLRNISPTCFSVAQDIEFHLA*RLCCCK
Trigger: CTTACAACAACATAACCGGCAGGCAAGATGAAACTC...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTAATAGCCATATGATCTaGATGTCTGATGCTGGAGTG +
Preference number: 4 (lower is better)
Translates to: DSPLRNISPTCFSVAQDINSHMI*MSDAGV
Trigger: CACTCCAGCATCAGACATCCAGATCATATGGCTATT...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp CGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTCCCAATGTCTTCCTTaGTTACTGGAGCAATATGAA +
Preference number: 4 (lower is better)
Translates to: RLSTEEYFPNMFFCCTRHSQCLP*LLEQYE
Trigger: TTCATATTGCTCCAGTAACCAAGGAAGACATTGGGA...ATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp CAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTTCCCAATGTCTTCCTTaGTTACTGGAGCAATATGAA +
Preference number: 4 (lower is better)
Translates to: QHENDSPLRNISPTCFSVSQCLP*LLEQYE
Trigger: TTCATATTGCTCCAGTAACCAAGGAAGACATTGGGA...AACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp TATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTTGGAACAGACCTGCTTaGGATCCTGGAAACACCAGA +
Preference number: 4 (lower is better)
Translates to: YMLKNLQFNLHKCLYSACWNRPA*DPGNTR
Trigger: TCTGGTGTTTCCAGGATCCCAAGCAGGTCTGTTCCA...ACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp GTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATACACAATCAGAGGCTaGAACAGACCTGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: VYMLKNLQFNLHKCLYSAYTIRG*NRPAWD
Trigger: ATCCCAAGCAGGTCTGTTCCAGCCTCTGATTGTGTA...TGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp GCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCTACACAATCAGAGGCTaGAACAGACCTGCTTGGGAT +
Preference number: 4 (lower is better)
Translates to: AQDIVYMLKNLQFNLHKCYTIRG*NRPAWD
Trigger: ATCCCAAGCAGGTCTGTTCCAGCCTCTGATTGTGTA...GCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp TATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTCATGAAAGTTCACTCTaGATGGTCTTGCTGCTGGGC +
Preference number: 4 (lower is better)
Translates to: YMLKNLQFNLHKCLYSACHESSL*MVLLLG
Trigger: GCCCAGCAGCAAGACCATCCAGAGTGAACTTTCATG...ACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGGGTGGCATCATGGTaGACTTGTGTTGGTATTCCA +
Preference number: 4 (lower is better)
Translates to: VAQDIVYMLKNLQFNLHKWVASW*TCVGIP
Trigger: TGGAATACCAACACAAGTTCACCATGATGCCACCCA...TTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCAGAGTTCCATTTCCCTaGATGTTGACCTTCACGATG +
Preference number: 4 (lower is better)
Translates to: AQDIVYMLKNLQFNLHKCRVPFP*MLTFTM
Trigger: CATCGTGAAGGTCAACATTCAGGGAAATGGAACTCT...GCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTTGGCCTGAAAATGTTTaGGCTTTCCTGTATTCTGTT +
Preference number: 4 (lower is better)
Translates to: DSPLRNISPTCFSVAQDIWPENV*AFLYSV
Trigger: AACAGAATACAGGAAAGCTCAAACATTTTCAGGCCA...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCAGAACGACTCTCCACTaGGGAATATTTCCCCAACAT +
Preference number: 4 (lower is better)
Translates to: AQDIVYMLKNLQFNLHKCRTTLH*GIFPQH
Trigger: ATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCT...GCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp GCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCGTTGATAAGCAGAGATaGATTGGGTGGCATCATGGT +
Preference number: 4 (lower is better)
Translates to: AQDIVYMLKNLQFNLHKCVDKQR*IGWHHG
Trigger: ACCATGATGCCACCCAATGCATCTCTGCTTATCAAC...GCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp CAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTTCTAAGCGAGGCCCATaGTTAATGATATATGTAGTA +
Preference number: 4 (lower is better)
Translates to: QHENDSPLRNISPTCFSVSKRGP*LMIYVV
Trigger: TACTACATATATCATTAAGCATGGGCCTCGCTTAGA...AACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp AACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACTCTAAGCGAGGCCCATaGTTAATGATATATGTAGTA +
Preference number: 4 (lower is better)
Translates to: NDSPLRNISPTCFSVAQDSKRGP*LMIYVV
Trigger: TACTACATATATCATTAAGCATGGGCCTCGCTTAGA...GTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp GCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCGTACTGTGCAAATCTTaGCCCGATACACAATCAGAG +
Preference number: 4 (lower is better)
Translates to: AQDIVYMLKNLQFNLHKCVLCKS*PDTQSE
Trigger: CTCTGATTGTGTATCGGGGCAAGATTTGCACAGTAC...GCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAAAGCCCAGTAAGTATTTaGGCATTGTGTGGGGTCTCT +
Preference number: 4 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKSPVSI*ALCGVS
Trigger: AGAGACCCCACACAATGCCCAAATACTTACTGGGCT...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAAATCAGGGAACTGCAGTaGGTTGATAAGCAGAGATGC +
Preference number: 4 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKIRELQ*VDKQRC
Trigger: GCATCTCTGCTTATCAACCCACTGCAGTTCCCTGAT...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAAACCTGCTTGGGATCCTaGAAACACCAGAAACATCTG +
Preference number: 4 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKTCLGS*KHQKHL
Trigger: CAGATGTTTCTGGTGTTTCCAGGATCCCAAGCAGGT...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCACATTTCCCTGAATGTTaGCCTTCACGATGTAATTGC +
Preference number: 4 (lower is better)
Translates to: VYMLKNLQFNLHKCLYSAHFPEC*PSRCNC
Trigger: GCAATTACATCGTGAAGGTCAACATTCAGGGAAATG...TGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCATTTCCCTGAATGTTaGCCTTCACGATGTAATTGC +
Preference number: 4 (lower is better)
Translates to: AQDIVYMLKNLQFNLHKCHFPEC*PSRCNC
Trigger: GCAATTACATCGTGAAGGTCAACATTCAGGGAAATG...GCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCAGCATCTTCATGGCCTaGAAATGTTTGAGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: AQDIVYMLKNLQFNLHKCSIFMA*KCLSFP
Trigger: AGGAAAGCTCAAACATTTTCAGGCCATGAAGATGCT...GCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAATGGGCAGGGATGTGCTaGATAACTTCATACACTGTA +
Preference number: 4 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKWAGMC*ITSYTV
Trigger: TACAGTGTATGAAGTTATTCAGCACATCCCTGCCCA...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAAGTACTGTTTAGCCCATaGAAGTTCACTCTGGATGGT +
Preference number: 4 (lower is better)
Translates to: VAQDIVYMLKNLQFNLHKVLFSP*KFTLDG
Trigger: ACCATCCAGAGTGAACTTTCATGGGCTAAACAGTAC...TTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAAAGAACGACTCTCCACTaGGGAATATTTCCCCAACAT +
Preference number: 4 (lower is better)
Translates to: VAQDIVYMLKNLQFNLHKRTTLH*GIFPQH
Trigger: ATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCT...TTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp TATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAGAACGACTCTCCACTaGGGAATATTTCCCCAACAT +
Preference number: 4 (lower is better)
Translates to: YMLKNLQFNLHKCLYSACRTTLH*GIFPQH
Trigger: ATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCT...ACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAAGTTGATAAGCAGAGATaGATTGGGTGGCATCATGGT +
Preference number: 4 (lower is better)
Translates to: VAQDIVYMLKNLQFNLHKVDKQR*IGWHHG
Trigger: ACCATGATGCCACCCAATGCATCTCTGCTTATCAAC...TTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAAGTTGATAAGCAGAGATaGATTGGGTGGCATCATGGT +
Preference number: 4 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKVDKQR*IGWHHG
Trigger: ACCATGATGCCACCCAATGCATCTCTGCTTATCAAC...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAACCTTCACGATGTAATTaGCTTCATCAGGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKPSRCN*LHQGTA
Trigger: TGCAGTTCCCTGATGAAGGCAATTACATCGTGAAGG...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAACCTTCACGATGTAATTaGCTTCATCAGGGAACTGCA +
Preference number: 4 (lower is better)
Translates to: VAQDIVYMLKNLQFNLHKPSRCN*LHQGTA
Trigger: TGCAGTTCCCTGATGAAGGCAATTACATCGTGAAGG...TTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp GTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCAGAGTTTCATCTTGCCTaGCGGTTATGTTGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: VYMLKNLQFNLHKCLYSAEFHLA*RLCCCK
Trigger: CTTACAACAACATAACCGGCAGGCAAGATGAAACTC...TGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp GTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATCATACACTGTACTGTaGAAATCTTGCCCCGATACA +
Preference number: 4 (lower is better)
Translates to: VYMLKNLQFNLHKCLYSASYTVL*KSCPDT
Trigger: TGTATCGGGGCAAGATTTGCACAGTACAGTGTATGA...TGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTACCTGCAGTTCAATTTaGATAAATGCCTCTATTCTG +
Preference number: 4 (lower is better)
Translates to: DSPLRNISPTCFSVAQDITCSSI*INASIL
Trigger: CAGAATAGAGGCATTTATGCAAATTGAACTGCAGGT...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAACATTTCCCTGAATGTTaGCCTTCACGATGTAATTGC +
Preference number: 4 (lower is better)
Translates to: VAQDIVYMLKNLQFNLHKHFPEC*PSRCNC
Trigger: GCAATTACATCGTGAAGGTCAACATTCAGGGAAATG...TTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAAGTTACTGGAGCAATATaGAGGGTATTGTTTTGGGGA +
Preference number: 4 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKVTGAI*RVLFWG
Trigger: TCCCCAAAACAATACCCTTCATATTGCTCCAGTAAC...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAAAGCATCTTCATGGCCTaGAAATGTTTGAGCTTTCCT +
Preference number: 4 (lower is better)
Translates to: VAQDIVYMLKNLQFNLHKSIFMA*KCLSFP
Trigger: AGGAAAGCTCAAACATTTTCAGGCCATGAAGATGCT...TTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp TATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAGGTATATTTTGCACTaGAAGACCCCAAGTGTGTCA +
Preference number: 4 (lower is better)
Translates to: YMLKNLQFNLHKCLYSACRYILH*KTPSVS
Trigger: TGACACACTTGGGGTCTTTCAGTGCAAAATATACCT...ACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394468.7
ENST00000453812.2
CDS-3UTR GCA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAAGAGTTTCATCTTGCCTaGCGGTTATGTTGTTGTAAG +
Preference number: 4 (lower is better)
Translates to: VAQDIVYMLKNLQFNLHKEFHLA*RLCCCK
Trigger: CTTACAACAACATAACCGGCAGGCAAGATGAAACTC...TTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATCATACACTGTACTGTaGAAATCTTGCCCCGATACA +
Preference number: 4 (lower is better)
Translates to: VAQDIVYMLKNLQFNLHKSYTVL*KSCPDT
Trigger: TGTATCGGGGCAAGATTTGCACAGTACAGTGTATGA...TTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAAGAAGGAGGTATATTTTaGACTGAAAGACCCCAAGTG +
Preference number: 4 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKEGGIF*TERPQV
Trigger: CACTTGGGGTCTTTCAGTGCAAAATATACCTCCTTC...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000394468.7
ENST00000453812.2
CDS-3UTR CCA 90 bp GTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCAGTCTTCCTTGGTTACTaGAGCAATATGAAGGGTATT +
Preference number: 4 (lower is better)
Translates to: VYMLKNLQFNLHKCLYSAVFLGY*SNMKGI
Trigger: AATACCCTTCATATTGCTCCAGTAACCAAGGAAGAC...TGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR TCA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAATGGCCTGAAAATGTTTaGGCTTTCCTGTATTCTGTT +
Preference number: 4 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKWPENV*AFLYSV
Trigger: AACAGAATACAGGAAAGCTCAAACATTTTCAGGCCA...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp GTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATCTAAGCGAGGCCCATaGTTAATGATATATGTAGTA +
Preference number: 4 (lower is better)
Translates to: VYMLKNLQFNLHKCLYSASKRGP*LMIYVV
Trigger: TACTACATATATCATTAAGCATGGGCCTCGCTTAGA...TGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CCA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAAGTCTTCCTTGGTTACTaGAGCAATATGAAGGGTATT +
Preference number: 4 (lower is better)
Translates to: VAQDIVYMLKNLQFNLHKVFLGY*SNMKGI
Trigger: AATACCCTTCATATTGCTCCAGTAACCAAGGAAGAC...TTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAAACCTGCAGTTCAATTTaGATAAATGCCTCTATTCTG +
Preference number: 4 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKTCSSI*INASIL
Trigger: CAGAATAGAGGCATTTATGCAAATTGAACTGCAGGT...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR GCA 90 bp TATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTACCTGCAGTTCAATTTaGATAAATGCCTCTATTCTG +
Preference number: 4 (lower is better)
Translates to: YMLKNLQFNLHKCLYSACTCSSI*INASIL
Trigger: CAGAATAGAGGCATTTATGCAAATTGAACTGCAGGT...ACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS TCA 90 bp GAGTGTGGAAGCCATAGTGGACGGGTAGGTAGAGGGCCTGACCTCTaGCGCCATGGACAGTGTGTGATGGCACTGTCACCTTCAGCCCCG +
Preference number: 5 (lower is better)
Translates to: ECGSHSGRVGRGPDL*RHGQCVMALSPSAP
Trigger: CGGGGCTGAAGGTGACAGTGCCATCACACACTGTCCATGGCGTCAGAGGTCAGGCCCTCTACCTACCCGTCCACTATGGCTTCCACACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS CCA 90 bp CCCCACATACTCCACAGCCCCAGAGGGAGGATGAATCTGCACCACTaGCTTTGTGACAGGATCATCAACCGTGACTTGTATCTTCTGACT +
Preference number: 5 (lower is better)
Translates to: PHILHSPRGRMNLHH*LCDRIINRDLYLLT
Trigger: AGTCAGAAGATACAAGTCACGGTTGATGATCCTGTCACAAAGCCAGTGGTGCAGATTCATCCTCCCTCTGGGGCTGTGGAGTATGTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp AACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGCATGGTGAACTTGTGTaGGTATTCCAAGTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: NPCHFRSPRQHENDSPLRHGELV*VFQVRN
Trigger: GTTCCTGACTTGGAATACCAACACAAGTTCACCATG...CCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp AACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGGGCATCATGGTGAACTaGTGTTGGTATTCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: NPCHFRSPRQHENDSPLRGIMVN*CWYSKS
Trigger: TGACTTGGAATACCAACACAAGTTCACCATGATGCC...CCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp CGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACAGGGAACTGCAGTGGGTaGATAAGCAGAGATGCATTG +
Preference number: 5 (lower is better)
Translates to: RSPRQHENDSPLRNISPTGNCSG*ISRDAL
Trigger: CAATGCATCTCTGCTTATCAACCCACTGCAGTTCCC...TGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp AACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGTGTACTGTGCAAATCTaGCCCCGATACACAATCAGA +
Preference number: 5 (lower is better)
Translates to: NPCHFRSPRQHENDSPLRCTVQI*PRYTIR
Trigger: TCTGATTGTGTATCGGGGCAAGATTTGCACAGTACA...CCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp TATGAGGAAACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCATAAGCAGAGATGCATaGGGTGGCATCATGGTGAAC +
Preference number: 5 (lower is better)
Translates to: YEETPVTFVLPVSMRTTLISRDA*GGIMVN
Trigger: GTTCACCATGATGCCACCCAATGCATCTCTGCTTAT...GAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTTTCCTCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS TCA 90 bp CCAGTAAGTATTTGGGCATTGTGTGGGGTCTCTCAAATAGCCATATaGTCTGGATGTCTGATGCTGGAGTGTGGAAGCCATAGTGGACGG +
Preference number: 5 (lower is better)
Translates to: PVSIWALCGVSQIAI*SGCLMLECGSHSGR
Trigger: CCGTCCACTATGGCTTCCACACTCCAGCATCAGACATCCAGATCATATGGCTATTTGAGAGACCCCACACAATGCCCAAATACTTACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp AACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGAAAGTTGTGAAGACCTaGAGCCACATTTCACAATCT +
Preference number: 5 (lower is better)
Translates to: NPCHFRSPRQHENDSPLRKVVKT*SHISQS
Trigger: AGATTGTGAAATGTGGCTCAAGGTCTTCACAACTTT...CCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000341723.8
ENST00000440868.5
CDS-3UTR CAA 90 bp CGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACACATGGTGAACTTGTGTaGGTATTCCAAGTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: RSPRQHENDSPLRNISPTHGELV*VFQVRN
Trigger: GTTCCTGACTTGGAATACCAACACAAGTTCACCATG...TGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp TATGAGGAAACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCATCATCAACCGTGACTaGTATCTTCTGACTGGCAGA +
Preference number: 5 (lower is better)
Translates to: YEETPVTFVLPVSMRTTLIINRD*YLLTGR
Trigger: TCTGCCAGTCAGAAGATACAAGTCACGGTTGATGAT...GAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTTTCCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp TATGAGGAAACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCAGCACACATAGTCCATaGTCTTCTGGGCTACTTTCT +
Preference number: 5 (lower is better)
Translates to: YEETPVTFVLPVSMRTTLSTHSP*SSGLLS
Trigger: AGAAAGTAGCCCAGAAGACAATGGACTATGTGTGCT...GAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTTTCCTCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp CGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTACTGTGCAAATCTaGCCCCGATACACAATCAGA +
Preference number: 5 (lower is better)
Translates to: RSPRQHENDSPLRNISPTCTVQI*PRYTIR
Trigger: TCTGATTGTGTATCGGGGCAAGATTTGCACAGTACA...TGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS CCA 90 bp TTCATCAGGGAACTGCAGTGGGTTGATAAGCAGAGATGCATTGGGTaGCATCATGGTGAACTTGTGTTGGTATTCCAAGTCAGGAACCAC +
Preference number: 5 (lower is better)
Translates to: FIRELQWVDKQRCIG*HHGELVLVFQVRNH
Trigger: GTGGTTCCTGACTTGGAATACCAACACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTTATCAACCCACTGCAGTTCCCTGATGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp CGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACAGTAAGTATTTGGGCATaGTGTGGGGTCTCTCAAATA +
Preference number: 5 (lower is better)
Translates to: RSPRQHENDSPLRNISPTVSIWA*CGVSQI
Trigger: TATTTGAGAGACCCCACACAATGCCCAAATACTTAC...TGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp AACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGATGATATATGTAGTATaGTCAGTCCTCCTAATCCAG +
Preference number: 5 (lower is better)
Translates to: NPCHFRSPRQHENDSPLRMIYVV*SVLLIQ
Trigger: CTGGATTAGGAGGACTGACAATACTACATATATCAT...CCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp CGTTCTCCCCGTCAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACAGAAATGAGTTTCATCTaGCCTGCCGGTTATGTTGTT +
Preference number: 5 (lower is better)
Translates to: RSPRQHENDSPLRNISPTEMSFI*PAGYVV
Trigger: AACAACATAACCGGCAGGCAAGATGAAACTCATTTC...TGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTGACGGGGAGAACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp TATGAGGAAACCCCTGTCACTTTCGTTCTCCCCGTCAGCATGAGAACGACTCTCGAAATGAGTTTCATCTaGCCTGCCGGTTATGTTGTT +
Preference number: 5 (lower is better)
Translates to: YEETPVTFVLPVSMRTTLEMSFI*PAGYVV
Trigger: AACAACATAACCGGCAGGCAAGATGAAACTCATTTC...GAGAGTCGTTCTCATGCTGACGGGGAGAACGAAAGTGACAGGGGTTTCCTCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp CGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATCTGGAACAGACCTGCTaGGGATCCTGGAAACACCAG +
Preference number: 5 (lower is better)
Translates to: RLSTEEYFPNMFFCCTRHLEQTC*GSWKHQ
Trigger: CTGGTGTTTCCAGGATCCCAAGCAGGTCTGTTCCAG...ATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTTCACTCTGGATGGTCTaGCTGCTGGGCAGGGATGTG +
Preference number: 5 (lower is better)
Translates to: DSPLRNISPTCFSVAQDISLWMV*LLGRDV
Trigger: CACATCCCTGCCCAGCAGCAAGACCATCCAGAGTGA...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS TCA 90 bp ATGAAAGTTCACTCTGGATGGTCTTGCTGCTGGGCAGGGATGTGCTaGATAACTTCATACACTGTACTGTGCAAATCTTGCCCCGATACA +
Preference number: 5 (lower is better)
Translates to: MKVHSGWSCCWAGMC*ITSYTVLCKSCPDT
Trigger: TGTATCGGGGCAAGATTTGCACAGTACAGTGTATGAAGTTATTCAGCACATCCCTGCCCAGCAGCAAGACCATCCAGAGTGAACTTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
ENST00000492616.1
CDS GCA 90 bp GTAATTGCCTTCATCAGGGAACTGCAGTGGGTTGATAAGCAGAGATaGATTGGGTGGCATCATGGTGAACTTGTGTTGGTATTCCAAGTC +
Preference number: 5 (lower is better)
Translates to: VIAFIRELQWVDKQR*IGWHHGELVLVFQV
Trigger: GACTTGGAATACCAACACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTTATCAACCCACTGCAGTTCCCTGATGAAGGCAATTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS TCA 90 bp CTTGTATCTTCTGACTGGCAGATAGAGTTCCATTTCCCTGAATGTTaGCCTTCACGATGTAATTGCCTTCATCAGGGAACTGCAGTGGGT +
Preference number: 5 (lower is better)
Translates to: LVSSDWQIEFHFPEC*PSRCNCLHQGTAVG
Trigger: ACCCACTGCAGTTCCCTGATGAAGGCAATTACATCGTGAAGGTCAACATTCAGGGAAATGGAACTCTATCTGCCAGTCAGAAGATACAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS CCA 90 bp ACCACAGACTTATTCACAGAGCCCAGTAAGTATTTGGGCATTGTGTaGGGTCTCTCAAATAGCCATATGATCTGGATGTCTGATGCTGGA +
Preference number: 5 (lower is better)
Translates to: TTDLFTEPSKYLGIV*GLSNSHMIWMSDAG
Trigger: TCCAGCATCAGACATCCAGATCATATGGCTATTTGAGAGACCCCACACAATGCCCAAATACTTACTGGGCTCTGTGAATAAGTCTGTGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS CCA 90 bp AATGTTGACCTTCACGATGTAATTGCCTTCATCAGGGAACTGCAGTaGGTTGATAAGCAGAGATGCATTGGGTGGCATCATGGTGAACTT +
Preference number: 5 (lower is better)
Translates to: NVDLHDVIAFIRELQ*VDKQRCIGWHHGEL
Trigger: AAGTTCACCATGATGCCACCCAATGCATCTCTGCTTATCAACCCACTGCAGTTCCCTGATGAAGGCAATTACATCGTGAAGGTCAACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp AACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACCCGAGCAAGCACCTGTaGCAAAGGAAAGGAAAGTTG +
Preference number: 5 (lower is better)
Translates to: NDSPLRNISPTCFSVAQDPSKHL*QRKGKL
Trigger: CAACTTTCCTTTCCTTTGCAACAGGTGCTTGCTCGG...GTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341723.8
ENST00000440868.5
CDS-3UTR CAA 90 bp CAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGGGAACTGCAGTGGGTaGATAAGCAGAGATGCATTG +
Preference number: 5 (lower is better)
Translates to: QHENDSPLRNISPTCFSVGNCSG*ISRDAL
Trigger: CAATGCATCTCTGCTTATCAACCCACTGCAGTTCCC...AACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp GTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATCACTCTGGATGGTCTaGCTGCTGGGCAGGGATGTG +
Preference number: 5 (lower is better)
Translates to: VYMLKNLQFNLHKCLYSASLWMV*LLGRDV
Trigger: CACATCCCTGCCCAGCAGCAAGACCATCCAGAGTGA...TGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS TCA 90 bp AAACAGTTTGCAACAATATCGAAGAGAAGGAGGTATATTTTGCACTaGAAGACCCCAAGTGTGTCACCGAAGGGCTCCATGAAAGCATCC +
Preference number: 5 (lower is better)
Translates to: KQFATISKRRRYILH*KTPSVSPKGSMKAS
Trigger: GGATGCTTTCATGGAGCCCTTCGGTGACACACTTGGGGTCTTTCAGTGCAAAATATACCTCCTTCTCTTCGATATTGTTGCAAACTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453812.2
CDS-3UTR CAA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTCCGAGCAAGCACCTGTaGCAAAGGAAAGGAAAGTTG +
Preference number: 5 (lower is better)
Translates to: DSPLRNISPTCFSVAQDIPSKHL*QRKGKL
Trigger: CAACTTTCCTTTCCTTTGCAACAGGTGCTTGCTCGG...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000341723.8
ENST00000440868.5
CDS-3UTR CAA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTGGGAACTGCAGTGGGTaGATAAGCAGAGATGCATTG +
Preference number: 5 (lower is better)
Translates to: DSPLRNISPTCFSVAQDIGNCSG*ISRDAL
Trigger: CAATGCATCTCTGCTTATCAACCCACTGCAGTTCCC...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp GTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCACTGGAACAGACCTGCTaGGGATCCTGGAAACACCAG +
Preference number: 5 (lower is better)
Translates to: VYMLKNLQFNLHKCLYSALEQTC*GSWKHQ
Trigger: CTGGTGTTTCCAGGATCCCAAGCAGGTCTGTTCCAG...TGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAATCACTCTGGATGGTCTaGCTGCTGGGCAGGGATGTG +
Preference number: 5 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKSLWMV*LLGRDV
Trigger: CACATCCCTGCCCAGCAGCAAGACCATCCAGAGTGA...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp CGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATCATGGTGAACTTGTGTaGGTATTCCAAGTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: RLSTEEYFPNMFFCCTRHHGELV*VFQVRN
Trigger: GTTCCTGACTTGGAATACCAACACAAGTTCACCATG...ATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTATAAGCAGAGATGCATaGGGTGGCATCATGGTGAAC +
Preference number: 5 (lower is better)
Translates to: DSPLRNISPTCFSVAQDIISRDA*GGIMVN
Trigger: GTTCACCATGATGCCACCCAATGCATCTCTGCTTAT...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp AACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATCATCAACCGTGACTaGTATCTTCTGACTGGCAGA +
Preference number: 5 (lower is better)
Translates to: NDSPLRNISPTCFSVAQDIINRD*YLLTGR
Trigger: TCTGCCAGTCAGAAGATACAAGTCACGGTTGATGAT...GTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp TATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTCTGGAACAGACCTGCTaGGGATCCTGGAAACACCAG +
Preference number: 5 (lower is better)
Translates to: YMLKNLQFNLHKCLYSACLEQTC*GSWKHQ
Trigger: CTGGTGTTTCCAGGATCCCAAGCAGGTCTGTTCCAG...ACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp AACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACTGTACTGTGCAAATCTaGCCCCGATACACAATCAGA +
Preference number: 5 (lower is better)
Translates to: NDSPLRNISPTCFSVAQDCTVQI*PRYTIR
Trigger: TCTGATTGTGTATCGGGGCAAGATTTGCACAGTACA...GTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTGGCATCATGGTGAACTaGTGTTGGTATTCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: DSPLRNISPTCFSVAQDIGIMVN*CWYSKS
Trigger: TGACTTGGAATACCAACACAAGTTCACCATGATGCC...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTATCATCAACCGTGACTaGTATCTTCTGACTGGCAGA +
Preference number: 5 (lower is better)
Translates to: DSPLRNISPTCFSVAQDIIINRD*YLLTGR
Trigger: TCTGCCAGTCAGAAGATACAAGTCACGGTTGATGAT...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp CAGCATGAGAACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTATGAAGGGTATTGTTTaGGGGAGAAAAGGAGTAGGT +
Preference number: 5 (lower is better)
Translates to: QHENDSPLRNISPTCFSVMKGIV*GRKGVG
Trigger: ACCTACTCCTTTTCTCCCCAAAACAATACCCTTCAT...AACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTTCTCATGCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp AACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACGAAATGAGTTTCATCTaGCCTGCCGGTTATGTTGTT +
Preference number: 5 (lower is better)
Translates to: NDSPLRNISPTCFSVAQDEMSFI*PAGYVV
Trigger: AACAACATAACCGGCAGGCAAGATGAAACTCATTTC...GTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAAGGGAACTGCAGTGGGTaGATAAGCAGAGATGCATTG +
Preference number: 5 (lower is better)
Translates to: VAQDIVYMLKNLQFNLHKGNCSG*ISRDAL
Trigger: CAATGCATCTCTGCTTATCAACCCACTGCAGTTCCC...TTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp GACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATTATGAAGGGTATTGTTTaGGGGAGAAAAGGAGTAGGT +
Preference number: 5 (lower is better)
Translates to: DSPLRNISPTCFSVAQDIMKGIV*GRKGVG
Trigger: ACCTACTCCTTTTCTCCCCAAAACAATACCCTTCAT...AATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp GCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCGGCATCATGGTGAACTaGTGTTGGTATTCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: AQDIVYMLKNLQFNLHKCGIMVN*CWYSKS
Trigger: TGACTTGGAATACCAACACAAGTTCACCATGATGCC...GCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAAATAAGCAGAGATGCATaGGGTGGCATCATGGTGAAC +
Preference number: 5 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKISRDA*GGIMVN
Trigger: GTTCACCATGATGCCACCCAATGCATCTCTGCTTAT...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAAATAAGCAGAGATGCATaGGGTGGCATCATGGTGAAC +
Preference number: 5 (lower is better)
Translates to: VAQDIVYMLKNLQFNLHKISRDA*GGIMVN
Trigger: GTTCACCATGATGCCACCCAATGCATCTCTGCTTAT...TTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp GTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCAATCATCAACCGTGACTaGTATCTTCTGACTGGCAGA +
Preference number: 5 (lower is better)
Translates to: VYMLKNLQFNLHKCLYSAIINRD*YLLTGR
Trigger: TCTGCCAGTCAGAAGATACAAGTCACGGTTGATGAT...TGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp AACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATGATATATGTAGTATaGTCAGTCCTCCTAATCCAG +
Preference number: 5 (lower is better)
Translates to: NDSPLRNISPTCFSVAQDMIYVV*SVLLIQ
Trigger: CTGGATTAGGAGGACTGACAATACTACATATATCAT...GTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp GTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCAAGCACACATAGTCCATaGTCTTCTGGGCTACTTTCT +
Preference number: 5 (lower is better)
Translates to: VYMLKNLQFNLHKCLYSASTHSP*SSGLLS
Trigger: AGAAAGTAGCCCAGAAGACAATGGACTATGTGTGCT...TGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp CGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACATAACCTGCAGTTCAATTaGCATAAATGCCTCTATTCT +
Preference number: 5 (lower is better)
Translates to: RLSTEEYFPNMFFCCTRHNLQFN*HKCLYS
Trigger: AGAATAGAGGCATTTATGCAAATTGAACTGCAGGTT...ATGTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp AACGACTCTCCACTGAGGAATATTTCCCCAACATGTTTTTCTGTTGCACAAGACAACCTGCAGTTCAATTaGCATAAATGCCTCTATTCT +
Preference number: 5 (lower is better)
Translates to: NDSPLRNISPTCFSVAQDNLQFN*HKCLYS
Trigger: AGAATAGAGGCATTTATGCAAATTGAACTGCAGGTT...GTCTTGTGCAACAGAAAAACATGTTGGGGAAATATTCCTCAGTGGAGAGTCGTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp TATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTCATGGTGAACTTGTGTaGGTATTCCAAGTCAGGAAC +
Preference number: 5 (lower is better)
Translates to: YMLKNLQFNLHKCLYSACHGELV*VFQVRN
Trigger: GTTCCTGACTTGGAATACCAACACAAGTTCACCATG...ACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAAGGCATCATGGTGAACTaGTGTTGGTATTCCAAGTCA +
Preference number: 5 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKGIMVN*CWYSKS
Trigger: TGACTTGGAATACCAACACAAGTTCACCATGATGCC...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAAAGCACACATAGTCCATaGTCTTCTGGGCTACTTTCT +
Preference number: 5 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKSTHSP*SSGLLS
Trigger: AGAAAGTAGCCCAGAAGACAATGGACTATGTGTGCT...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAATGTACTGTGCAAATCTaGCCCCGATACACAATCAGA +
Preference number: 5 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKCTVQI*PRYTIR
Trigger: TCTGATTGTGTATCGGGGCAAGATTTGCACAGTACA...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp TATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTATGAAGGGTATTGTTTaGGGGAGAAAAGGAGTAGGT +
Preference number: 5 (lower is better)
Translates to: YMLKNLQFNLHKCLYSACMKGIV*GRKGVG
Trigger: ACCTACTCCTTTTCTCCCCAAAACAATACCCTTCAT...ACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp TATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTGAAATGAGTTTCATCTaGCCTGCCGGTTATGTTGTT +
Preference number: 5 (lower is better)
Translates to: YMLKNLQFNLHKCLYSACEMSFI*PAGYVV
Trigger: AACAACATAACCGGCAGGCAAGATGAAACTCATTTC...ACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAAAAAGTTGTGAAGACCTaGAGCCACATTTCACAATCT +
Preference number: 5 (lower is better)
Translates to: VAQDIVYMLKNLQFNLHKKVVKT*SHISQS
Trigger: AGATTGTGAAATGTGGCTCAAGGTCTTCACAACTTT...TTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
37% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000341723.8
ENST00000440868.5
CDS-3UTR CAA 90 bp GTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCAATGATATATGTAGTATaGTCAGTCCTCCTAATCCAG +
Preference number: 5 (lower is better)
Translates to: VYMLKNLQFNLHKCLYSAMIYVV*SVLLIQ
Trigger: CTGGATTAGGAGGACTGACAATACTACATATATCAT...TGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp GCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCAACCTGCAGTTCAATTaGCATAAATGCCTCTATTCT +
Preference number: 5 (lower is better)
Translates to: AQDIVYMLKNLQFNLHKCNLQFN*HKCLYS
Trigger: AGAATAGAGGCATTTATGCAAATTGAACTGCAGGTT...GCATTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp GTTGCACAAGACATTGTGTATATGCTGAAAAACCTGCAGTTCAATTTGCATAAAATGATATATGTAGTATaGTCAGTCCTCCTAATCCAG +
Preference number: 5 (lower is better)
Translates to: VAQDIVYMLKNLQFNLHKMIYVV*SVLLIQ
Trigger: CTGGATTAGGAGGACTGACAATACTACATATATCAT...TTTATGCAAATTGAACTGCAGGTTTTTCAGCATATACACAATGTCTTGTGCAAC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS-3UTR CAA 90 bp ATGCTGAAAAACCTGCAGTTCAATTTGCATAAATGCCTCTATTCTGCATGTAAAGAAGCAGTAAACAGTTaGCAACAATATCGAAGAGAA +
Preference number: 5 (lower is better)
Translates to: MLKNLQFNLHKCLYSACKEAVNS*QQYRRE
Trigger: TTCTCTTCGATATTGTTGCAAACTGTTTACTGCTTC...TTTACATGCAGAATAGAGGCATTTATGCAAATTGAACTGCAGGTTTTTCAGCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000453812.2
CDS TCA 72 bp AGCCATAGTGGACGGGTAGGTAGAGGGCCTGACCTCTaGCGCCATGGACAGTGTGTGATGGCACTGTCACCT +
Preference number: 6 (lower is better)
Translates to: SHSGRVGRGPDL*RHGQCVMALSP
Trigger: AGGTGACAGTGCCATCACACACTGTCCATGGCGTCAGAGGTCAGGCCCTCTACCTACCCGTCCACTATGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS TCA 72 bp ACTGAAAGACCCCAAGTGTGTCACCGAAGGGCTCCATaGAAGCATCCTGTCCCATGCATGCAGTGCCCTGTT +
Preference number: 6 (lower is better)
Translates to: TERPQVCHRRAP*KHPVPCMQCPV
Trigger: AACAGGGCACTGCATGCATGGGACAGGATGCTTTCATGGAGCCCTTCGGTGACACACTTGGGGTCTTTCAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000394468.7
ENST00000453812.2
CDS TCA 72 bp GAGCAAGCACCGAAGAGAAGGAGGTATATTTTGCACTaGAAGACCCCAAGTGTGTCACCGAAGGGCTCCATG +
Preference number: 6 (lower is better)
Translates to: EQAPKRRRYILH*KTPSVSPKGSM
Trigger: CATGGAGCCCTTCGGTGACACACTTGGGGTCTTTCAGTGCAAAATATACCTCCTTCTCTTCGGTGCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000394468.7
CDS CAA 90 bp CCCAATGTCTTCCTTGGTTACTGGAGCAATATGAAGGGTATTGTTTaGGGGAGAAAAGGAGTAGGTGGAGCTGGTGTGGACAGGTCTCCC +
Preference number: 6 (lower is better)
Translates to: PNVFLGYWSNMKGIV*GRKGVGGAGVDRSP
Trigger: GGGAGACCTGTCCACACCAGCTCCACCTACTCCTTTTCTCCCCAAAACAATACCCTTCATATTGCTCCAGTAACCAAGGAAGACATTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS CAA 90 bp GGCAGGGATGTGCTGAATAACTTCATACACTGTACTGTGCAAATCTaGCCCCGATACACAATCAGAGGCTGGAACAGACCTGCTTGGGAT +
Preference number: 6 (lower is better)
Translates to: GRDVLNNFIHCTVQI*PRYTIRGWNRPAWD
Trigger: ATCCCAAGCAGGTCTGTTCCAGCCTCTGATTGTGTATCGGGGCAAGATTTGCACAGTACAGTGTATGAAGTTATTCAGCACATCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
ENST00000492616.1
CDS TCA 72 bp CACTCTGGATGGTCTTGCTGCTGGGCAGGGATGTGCTaGATAACTTCATACACTGTACTGTGCAAATCTTGC +
Preference number: 6 (lower is better)
Translates to: HSGWSCCWAGMC*ITSYTVLCKSC
Trigger: GCAAGATTTGCACAGTACAGTGTATGAAGTTATTCAGCACATCCCTGCCCAGCAGCAAGACCATCCAGAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
ENST00000492616.1
CDS CAA 72 bp TCAGGGAACTGCAGTGGGTTGATAAGCAGAGATGCATaGGGTGGCATCATGGTGAACTTGTGTTGGTATTCC +
Preference number: 6 (lower is better)
Translates to: SGNCSGLISRDA*GGIMVNLCWYS
Trigger: GGAATACCAACACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTTATCAACCCACTGCAGTTCCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS CAA 90 bp CCCGAGCAAGCACCTGTTGCAAAGGAAAGGAAAGTTGTGAAGACCTaGAGCCACATTTCACAATCTAAAGGGGCAAATGCAGAGAGAACC +
Preference number: 6 (lower is better)
Translates to: PEQAPVAKERKVVKT*SHISQSKGANAERT
Trigger: GGTTCTCTCTGCATTTGCCCCTTTAGATTGTGAAATGTGGCTCAAGGTCTTCACAACTTTCCTTTCCTTTGCAACAGGTGCTTGCTCGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000341723.8
ENST00000440868.5
CDS CAA 90 bp TTGCCTTCATCAGGGAACTGCAGTGGGTTGATAAGCAGAGATGCATaGGGTGGCATCATGGTGAACTTGTGTTGGTATTCCAAGTCAGGA +
Preference number: 6 (lower is better)
Translates to: LPSSGNCSGLISRDA*GGIMVNLCWYSKSG
Trigger: TCCTGACTTGGAATACCAACACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTTATCAACCCACTGCAGTTCCCTGATGAAGGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS CAA 90 bp GTTGATAAGCAGAGATGCATTGGGTGGCATCATGGTGAACTTGTGTaGGTATTCCAAGTCAGGAACCACAGACTTATTCACAGAGCCCAG +
Preference number: 6 (lower is better)
Translates to: VDKQRCIGWHHGELV*VFQVRNHRLIHRAQ
Trigger: CTGGGCTCTGTGAATAAGTCTGTGGTTCCTGACTTGGAATACCAACACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTTATCAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS TCA 72 bp ATTTGGGCATTGTGTGGGGTCTCTCAAATAGCCATATaGTCTGGATGTCTGATGCTGGAGTGTGGAAGCCAT +
Preference number: 6 (lower is better)
Translates to: IWALCGVSQIAI*SGCLMLECGSH
Trigger: ATGGCTTCCACACTCCAGCATCAGACATCCAGATCATATGGCTATTTGAGAGACCCCACACAATGCCCAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS TCA 72 bp GCAACAATATCGAAGAGAAGGAGGTATATTTTGCACTaGAAGACCCCAAGTGTGTCACCGAAGGGCTCCATG +
Preference number: 6 (lower is better)
Translates to: ATISKRRRYILH*KTPSVSPKGSM
Trigger: CATGGAGCCCTTCGGTGACACACTTGGGGTCTTTCAGTGCAAAATATACCTCCTTCTCTTCGATATTGTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453812.2
CDS CCA 72 bp GAACTGCAGTGGGTTGATAAGCAGAGATGCATTGGGTaGCATCATGGTGAACTTGTGTTGGTATTCCAAGTC +
Preference number: 6 (lower is better)
Translates to: ELQWVDKQRCIG*HHGELVLVFQV
Trigger: GACTTGGAATACCAACACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTTATCAACCCACTGCAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS CCA 72 bp CTTCACGATGTAATTGCCTTCATCAGGGAACTGCAGTaGGTTGATAAGCAGAGATGCATTGGGTGGCATCAT +
Preference number: 6 (lower is better)
Translates to: LHDVIAFIRELQ*VDKQRCIGWHH
Trigger: ATGATGCCACCCAATGCATCTCTGCTTATCAACCCACTGCAGTTCCCTGATGAAGGCAATTACATCGTGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS CAA 90 bp TCCAAGTCAGGAACCACAGACTTATTCACAGAGCCCAGTAAGTATTaGGGCATTGTGTGGGGTCTCTCAAATAGCCATATGATCTGGATG +
Preference number: 6 (lower is better)
Translates to: SKSGTTDLFTEPSKY*GIVWGLSNSHMIWM
Trigger: CATCCAGATCATATGGCTATTTGAGAGACCCCACACAATGCCCAAATACTTACTGGGCTCTGTGAATAAGTCTGTGGTTCCTGACTTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS CAA 90 bp AGTGGGTTGATAAGCAGAGATGCATTGGGTGGCATCATGGTGAACTaGTGTTGGTATTCCAAGTCAGGAACCACAGACTTATTCACAGAG +
Preference number: 6 (lower is better)
Translates to: SGLISRDALGGIMVN*CWYSKSGTTDLFTE
Trigger: CTCTGTGAATAAGTCTGTGGTTCCTGACTTGGAATACCAACACAAGTTCACCATGATGCCACCCAATGCATCTCTGCTTATCAACCCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS CAA 72 bp GTGCTGAATAACTTCATACACTGTACTGTGCAAATCTaGCCCCGATACACAATCAGAGGCTGGAACAGACCT +
Preference number: 6 (lower is better)
Translates to: VLNNFIHCTVQI*PRYTIRGWNRP
Trigger: AGGTCTGTTCCAGCCTCTGATTGTGTATCGGGGCAAGATTTGCACAGTACAGTGTATGAAGTTATTCAGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
ENST00000492616.1
CDS TCA 72 bp TCTGACTGGCAGATAGAGTTCCATTTCCCTGAATGTTaGCCTTCACGATGTAATTGCCTTCATCAGGGAACT +
Preference number: 6 (lower is better)
Translates to: SDWQIEFHFPEC*PSRCNCLHQGT
Trigger: AGTTCCCTGATGAAGGCAATTACATCGTGAAGGTCAACATTCAGGGAAATGGAACTCTATCTGCCAGTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2
CDS GCA 72 bp AGTTTGCAACAATATCGAAGAGAAGGAGGTATATTTTaGACTGAAAGACCCCAAGTGTGTCACCGAAGGGCT +
Preference number: 6 (lower is better)
Translates to: SLQQYRREGGIF*TERPQVCHRRA
Trigger: AGCCCTTCGGTGACACACTTGGGGTCTTTCAGTGCAAAATATACCTCCTTCTCTTCGATATTGTTGCAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000453812.2
CDS CCA 72 bp CAGGCAGCTGTAATTCCCAATGTCTTCCTTGGTTACTaGAGCAATATGAAGGGTATTGTTTTGGGGAGAAAA +
Preference number: 6 (lower is better)
Translates to: QAAVIPNVFLGY*SNMKGIVLGRK
Trigger: TTTTCTCCCCAAAACAATACCCTTCATATTGCTCCAGTAACCAAGGAAGACATTGGGAATTACAGCTGCCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000341723.8
ENST00000394468.7
ENST00000440868.5
ENST00000453812.2