RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HENMT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000162639

Ensembl transcript IDs: ENST00000370031.5, ENST00000370032.9, ENST00000402983.5, ENST00000420055.1, ENST00000483729.1, ENST00000493676.1, ENST00000651461.1

Found 220 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp AGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTaGAGTCTGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAA +
Preference number: 1 (lower is better)
Translates to: RKAPVLNPHIFLRAH*SLAISQAGLSNGLE
Trigger: TTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
3UTR-3UTR TCA 90 bp ACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCGAGCACAACTATCGCTaGGACCCTGAAATTTCAGGA +
Preference number: 2 (lower is better)
Translates to: TRFKPSYLSQGSLQSGHIEHNYR*DPEISG
Trigger: TCCTGAAATTTCAGGGTCTCAGCGATAGTTGTGCTC...GATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
3UTR-3UTR TCA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAGAGCACAACTATCGCTaGGACCCTGAAATTTCAGGA +
Preference number: 2 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSEEHNYR*DPEISG
Trigger: TCCTGAAATTTCAGGGTCTCAGCGATAGTTGTGCTC...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
3UTR-3UTR CCA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGGTCTGTCCAATGGCTTaGAACATAGACTTTTGCAGT +
Preference number: 2 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQVCPMA*NIDFCS
Trigger: ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGAC...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
3UTR-3UTR TCA 90 bp ACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCAAACTAAATTCTAAGTaGGCACAACTATCGCTGAGA +
Preference number: 2 (lower is better)
Translates to: TRFKPSYLSQGSLQSGHIKLNSK*AQLSLR
Trigger: TCTCAGCGATAGTTGTGCTCACTTAGAATTTAGTTT...GATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
3UTR-3UTR TCA 90 bp CAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTAAACTAAATTCTAAGTaGGCACAACTATCGCTGAGA +
Preference number: 2 (lower is better)
Translates to: QRKAPVLNPHIFLRAHCSKLNSK*AQLSLR
Trigger: TCTCAGCGATAGTTGTGCTCACTTAGAATTTAGTTT...ACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
3UTR-3UTR TCA 90 bp TGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTAAACTAAATTCTAAGTaGGCACAACTATCGCTGAGA +
Preference number: 2 (lower is better)
Translates to: WPYLKQVCPMAWNIDFCSKLNSK*AQLSLR
Trigger: TCTCAGCGATAGTTGTGCTCACTTAGAATTTAGTTT...ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
3UTR GCA 72 bp CCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTaGAGTCTGGCCATATCTCAAGCAGGTCTGTCCAAT +
Preference number: 3 (lower is better)
Translates to: PVLNPHIFLRAH*SLAISQAGLSN
Trigger: ATTGGACAGACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
3UTR-3UTR CAA 90 bp ACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCGGTCTGTCCAATGGCTaGGAACATAGACTTTTGCAG +
Preference number: 3 (lower is better)
Translates to: TRFKPSYLSQGSLQSGHIGLSNG*EHRLLQ
Trigger: CTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACC...GATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
3UTR-3UTR CAA 90 bp CAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACGGTCTGTCCAATGGCTaGGAACATAGACTTTTGCAG +
Preference number: 3 (lower is better)
Translates to: QNQRKAPVLNPHIFLRAHGLSNG*EHRLLQ
Trigger: CTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACC...GTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
3UTR CCA 72 bp GTCTGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTaGAACATAGACTTTTGCAGTGAAACTTTAAAAACA +
Preference number: 3 (lower is better)
Translates to: VWPYLKQVCPMA*NIDFCSETLKT
Trigger: TGTTTTTAAAGTTTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp AGGGCTCACTGCAGTCTGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACCGCTAGCGTGCGGCTaGGACGCGGCACGGTACGGC +
Preference number: 4 (lower is better)
Translates to: RAHCSLAISQAGLSNGLEPLACG*DAARYG
Trigger: GCCGTACCGTGCCGCGTCGCAGCCGCACGCTAGCGG...TTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS-3UTR TCA 90 bp CAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTAACTCAGCGCCGCCCTaGCGCCCGCGCACGCACGGC +
Preference number: 4 (lower is better)
Translates to: QRKAPVLNPHIFLRAHCSNSAPP*RPRTHG
Trigger: GCCGTGCGTGCGCGGGCGTCAGGGCGGCGCTGAGTT...ACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402983.5
CDS-3UTR GCA 90 bp GCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATTGACCCCGCTAGCGTaGGGCTGCGACGCGGCACGG +
Preference number: 4 (lower is better)
Translates to: APVLNPHIFLRAHCSLAILTPLA*GCDAAR
Trigger: CCGTGCCGCGTCGCAGCCGCACGCTAGCGGGGTCAA...TATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS-3UTR GCA 90 bp ACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCGAGGACCCCTGCGCCTaGCGCGCCGTTGACCCCGCT +
Preference number: 4 (lower is better)
Translates to: TRFKPSYLSQGSLQSGHIEDPCA*RAVDPA
Trigger: AGCGGGGTCAACGGCGCGGCAGGCGCAGGGGTCCTC...GATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS-3UTR CCA 90 bp GTCCAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTGCCCCGGGAGCCTCATaGTGCGCCGAGCTCCGTCCC +
Preference number: 4 (lower is better)
Translates to: VQNQRKAPVLNPHIFLRAAPGAS*CAELRP
Trigger: GGGACGGAGCTCGGCGCACCATGAGGCTCCCGGGGC...AGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS-3UTR GCA 90 bp GTCCAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCTTGGCGAGGACCCCTaGGCCTGCCGCGCCGTTGAC +
Preference number: 4 (lower is better)
Translates to: VQNQRKAPVLNPHIFLRALGEDP*ACRAVD
Trigger: GTCAACGGCGCGGCAGGCGCAGGGGTCCTCGCCAAG...AGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS-3UTR GCA 90 bp AGGGCTCACTGCAGTCTGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACAGGTCAGCCACCACTaGAGAACCATCACTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RAHCSLAISQAGLSNGLEQVSHH*RTITAQ
Trigger: CTGAGCAGTGATGGTTCTGCAGTGGTGGCTGACCTG...TTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp AGGGCTCACTGCAGTCTGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACTCAGCTCCAGCTGGTaGTTCCCCGACACCAGTAAA +
Preference number: 4 (lower is better)
Translates to: RAHCSLAISQAGLSNGLELSSSW*FPDTSK
Trigger: TTTACTGGTGTCGGGGAACCACCAGCTGGAGCTGAG...TTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp GTCCAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTGGCTTGGGCGGCTGTTaGGTTCGTGGCGCTCCCGAG +
Preference number: 4 (lower is better)
Translates to: VQNQRKAPVLNPHIFLRAGLGGC*VRGAPE
Trigger: CTCGGGAGCGCCACGAACTCAACAGCCGCCCAAGCC...AGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS-3UTR GCA 90 bp CAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACCCGGGAGCCTCATGGTaGGCCGAGCTCCGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: QNQRKAPVLNPHIFLRAHPGASW*AELRPS
Trigger: AGAGGGACGGAGCTCGGCGCACCATGAGGCTCCCGG...GTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS-3UTR CCA 90 bp TGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTAGCCGGAAGGCGGCTTaGGCGGCTGTTGAGTTCGTG +
Preference number: 4 (lower is better)
Translates to: WPYLKQVCPMAWNIDFCSSRKAA*AAVEFV
Trigger: CACGAACTCAACAGCCGCCCAAGCCGCCTTCCGGCT...ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS-3UTR CCA 90 bp TGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTTCCTCTTCCGAACCTTaGCGAGGACCCCTGCGCCTG +
Preference number: 4 (lower is better)
Translates to: WPYLKQVCPMAWNIDFCSSSSEP*RGPLRL
Trigger: CAGGCGCAGGGGTCCTCGCCAAGGTTCGGAAGAGGA...ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS-3UTR CCA 90 bp CAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTCTCACGGTCGGCCTTaGGCCCCGGGAGCCTCATGG +
Preference number: 4 (lower is better)
Translates to: QNQRKAPVLNPHIFLRAHSHGRP*APGASW
Trigger: CCATGAGGCTCCCGGGGCCCAAGGCCGACCGTGAGA...GTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS-3UTR TCA 90 bp AGGGCTCACTGCAGTCTGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACCTTCTCAACCTCTGTaGAGACTGGTCCAAAGCATG +
Preference number: 4 (lower is better)
Translates to: RAHCSLAISQAGLSNGLEPSQPL*RLVQSM
Trigger: CATGCTTTGGACCAGTCTTCACAGAGGTTGAGAAGG...TTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp GCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATACAGGTCAGCCACCACTaGAGAACCATCACTGCTCAG +
Preference number: 4 (lower is better)
Translates to: APVLNPHIFLRAHCSLAIQVSHH*RTITAQ
Trigger: CTGAGCAGTGATGGTTCTGCAGTGGTGGCTGACCTG...TATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp TATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAACTCGGCTGTTGAGTTCGTaGCGCTCCCGAGGCGTGGCA +
Preference number: 4 (lower is better)
Translates to: YLKQVCPMAWNIDFCSETRLLSS*RSRGVA
Trigger: TGCCACGCCTCGGGAGCGCCACGAACTCAACAGCCG...AGTTTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS-3UTR TCA 90 bp TGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTTGGGACAGGGGCCTTTaGGCCACCAATGTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: WPYLKQVCPMAWNIDFCSWDRGL*ATNVFG
Trigger: CCCAAAGACATTGGTGGCTCAAAGGCCCCTGTCCCA...ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp CAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTTGGGACAGGGGCCTTTaGGCCACCAATGTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: QRKAPVLNPHIFLRAHCSWDRGL*ATNVFG
Trigger: CCCAAAGACATTGGTGGCTCAAAGGCCCCTGTCCCA...ACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp AGGGCTCACTGCAGTCTGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACCACTTCAGGAAATCTaGCCAGATCACCTGAATCCA +
Preference number: 4 (lower is better)
Translates to: RAHCSLAISQAGLSNGLEPLQEI*PDHLNP
Trigger: TGGATTCAGGTGATCTGGCCAGATTTCCTGAAGTGG...TTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp ACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCGGGCTCACTGCAGTCTaGCCATATCTCAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: TRFKPSYLSQGSLQSGHIGLTAV*PYLKQV
Trigger: GACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCC...GATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAATGGGACAGGGGCCTTTaGGCCACCAATGTCTTTGGG +
Preference number: 4 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSEWDRGL*ATNVFG
Trigger: CCCAAAGACATTGGTGGCTCAAAGGCCCCTGTCCCA...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp GCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATACCTTCTCAACCTCTGTaGAGACTGGTCCAAAGCATG +
Preference number: 4 (lower is better)
Translates to: APVLNPHIFLRAHCSLAIPSQPL*RLVQSM
Trigger: CATGCTTTGGACCAGTCTTCACAGAGGTTGAGAAGG...TATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp TGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTCTCAGCTCCAGCTGGTaGTTCCCCGACACCAGTAAA +
Preference number: 4 (lower is better)
Translates to: WPYLKQVCPMAWNIDFCSLSSSW*FPDTSK
Trigger: TTTACTGGTGTCGGGGAACCACCAGCTGGAGCTGAG...ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp CAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTGGGCTCACTGCAGTCTaGCCATATCTCAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: QRKAPVLNPHIFLRAHCSGLTAV*PYLKQV
Trigger: GACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCC...ACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp GCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATAGAGCACAACTATCGCTaGGACCCTGAAATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: APVLNPHIFLRAHCSLAIEHNYR*DPEISG
Trigger: TCCTGAAATTTCAGGGTCTCAGCGATAGTTGTGCTC...TATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp GCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCAGCACTGACTCAGTaGAACCAACGCTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: APVLNPHIFLRAHCSLAISALTQ*NQRFCL
Trigger: AAGACAGAAGCGTTGGTTTCACTGAGTCAGTGCTGA...TATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370031.5
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAACAGGTCAGCCACCACTaGAGAACCATCACTGCTCAG +
Preference number: 4 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSEQVSHH*RTITAQ
Trigger: CTGAGCAGTGATGGTTCTGCAGTGGTGGCTGACCTG...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp GCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATTTCTCAGGGCTCACTaGAGTCTGGCCATATCTCAA +
Preference number: 4 (lower is better)
Translates to: APVLNPHIFLRAHCSLAIFLRAH*SLAISQ
Trigger: TTGAGATATGGCCAGACTGCAGTGAGCCCTGAGAAA...TATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp CAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTTTCCGCCTTGGCAGGTaGCTCACTCTTAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: QRKAPVLNPHIFLRAHCSFRLGR*LTLKLS
Trigger: GGAAAGCTTAAGAGTGAGCCACCTGCCAAGGCGGAA...ACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTTCCGCCTTGGCAGGTaGCTCACTCTTAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQFRLGR*LTLKLS
Trigger: GGAAAGCTTAAGAGTGAGCCACCTGCCAAGGCGGAA...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp GCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATACAACACAGAAGGGTGTaGGAGAGTTCTCTATCTTGG +
Preference number: 4 (lower is better)
Translates to: APVLNPHIFLRAHCSLAIQHRRV*ESSLSW
Trigger: CCAAGATAGAGAACTCTCCCACACCCTTCTGTGTTG...TATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp AGGGCTCACTGCAGTCTGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAAGTCTGTCCAATGGCTTaGAACATAGACTTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: RAHCSLAISQAGLSNGLEVCPMA*NIDFCS
Trigger: ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGAC...TTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAGGGCTCACTGCAGTCTaGCCATATCTCAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSEGLTAV*PYLKQV
Trigger: GACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCC...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp GCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCCACAACGGAGCCATaGTACAATGTGATGGTCAAA +
Preference number: 4 (lower is better)
Translates to: APVLNPHIFLRAHCSLAISTTEP*YNVMVK
Trigger: TTTGACCATCACATTGTATCATGGCTCCGTTGTGGA...TATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGCCTTCTCAACCTCTGTaGAGACTGGTCCAAAGCATG +
Preference number: 4 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQPSQPL*RLVQSM
Trigger: CATGCTTTGGACCAGTCTTCACAGAGGTTGAGAAGG...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp ACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCCTGCAGAACCATCACTaGTCAGAGGAATTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: TRFKPSYLSQGSLQSGHILQNHH*SEELSQ
Trigger: CTGACTCAATTCCTCTGAGCAGTGATGGTTCTGCAG...GATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp GTCCAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCAGGTCAGCCACCACTaGAGAACCATCACTGCTCAG +
Preference number: 4 (lower is better)
Translates to: VQNQRKAPVLNPHIFLRAQVSHH*RTITAQ
Trigger: CTGAGCAGTGATGGTTCTGCAGTGGTGGCTGACCTG...AGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAATCGCTTCCATCATCCTaGGGTAAGCAGCATGCCCAA +
Preference number: 4 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSESLPSS*GKQHAQ
Trigger: TTGGGCATGCTGCTTACCGCAGGATGATGGAAGCGA...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370031.5
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp CAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACCTCAGCTCCAGCTGGTaGTTCCCCGACACCAGTAAA +
Preference number: 4 (lower is better)
Translates to: QNQRKAPVLNPHIFLRAHLSSSW*FPDTSK
Trigger: TTTACTGGTGTCGGGGAACCACCAGCTGGAGCTGAG...GTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp GTCCAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCTCAGCTCCAGCTGGTaGTTCCCCGACACCAGTAAA +
Preference number: 4 (lower is better)
Translates to: VQNQRKAPVLNPHIFLRALSSSW*FPDTSK
Trigger: TTTACTGGTGTCGGGGAACCACCAGCTGGAGCTGAG...AGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp CAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACGGGCTCACTGCAGTCTaGCCATATCTCAAGCAGGTC +
Preference number: 4 (lower is better)
Translates to: QNQRKAPVLNPHIFLRAHGLTAV*PYLKQV
Trigger: GACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCC...GTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAAGTGGAGGTTTAAACTaGATTGCCGTCTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSESGGLN*IAVSLG
Trigger: TCCCAGGGAGACGGCAATTCAGTTTAAACCTCCACT...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp AGGGCTCACTGCAGTCTGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAAATTCAATGCATGGATTaGCTTTTAGCAGCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: RAHCSLAISQAGLSNGLEIQCMD*LLAALR
Trigger: TCTTAAGGCTGCTAAAAGTCAATCCATGCATTGAAT...TTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp GCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATAAGCCATGATACAATGTaGTGGTCAAATTCAGATCCC +
Preference number: 4 (lower is better)
Translates to: APVLNPHIFLRAHCSLAISHDTM*WSNSDP
Trigger: GGGATCTGAATTTGACCATCACATTGTATCATGGCT...TATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp TGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAGCACAACTATCGCTaGGACCCTGAAATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: WPYLKQVCPMAWNIDFCSEHNYR*DPEISG
Trigger: TCCTGAAATTTCAGGGTCTCAGCGATAGTTGTGCTC...ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp AGGGCTCACTGCAGTCTGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAAAAACTAAATTCTAAGTaGGCACAACTATCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: RAHCSLAISQAGLSNGLEKLNSK*AQLSLR
Trigger: TCTCAGCGATAGTTGTGCTCACTTAGAATTTAGTTT...TTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp TGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTTCAGCACTGACTCAGTaGAACCAACGCTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: WPYLKQVCPMAWNIDFCSSALTQ*NQRFCL
Trigger: AAGACAGAAGCGTTGGTTTCACTGAGTCAGTGCTGA...ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370031.5
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp CAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTTCAGCACTGACTCAGTaGAACCAACGCTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: QRKAPVLNPHIFLRAHCSSALTQ*NQRFCL
Trigger: AAGACAGAAGCGTTGGTTTCACTGAGTCAGTGCTGA...ACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370031.5
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp AGGGCTCACTGCAGTCTGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACGTCAACCACACTACTaGACTGTAGATTATTTTCTT +
Preference number: 4 (lower is better)
Translates to: RAHCSLAISQAGLSNGLERQPHY*TVDYFL
Trigger: AAGAAAATAATCTACAGTGCAGTAGTGTGGTTGACG...TTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp TGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTTTTCTCAGGGCTCACTaGAGTCTGGCCATATCTCAA +
Preference number: 4 (lower is better)
Translates to: WPYLKQVCPMAWNIDFCSFLRAH*SLAISQ
Trigger: TTGAGATATGGCCAGACTGCAGTGAGCCCTGAGAAA...ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTTTCTCAGGGCTCACTaGAGTCTGGCCATATCTCAA +
Preference number: 4 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQFLRAH*SLAISQ
Trigger: TTGAGATATGGCCAGACTGCAGTGAGCCCTGAGAAA...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp TATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAACTTCGCTTCCATCATCCTaGGGTAAGCAGCATGCCCAA +
Preference number: 4 (lower is better)
Translates to: YLKQVCPMAWNIDFCSETSLPSS*GKQHAQ
Trigger: TTGGGCATGCTGCTTACCGCAGGATGATGGAAGCGA...AGTTTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370031.5
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp TGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTCCACTTCAGGAAATCTaGCCAGATCACCTGAATCCA +
Preference number: 4 (lower is better)
Translates to: WPYLKQVCPMAWNIDFCSPLQEI*PDHLNP
Trigger: TGGATTCAGGTGATCTGGCCAGATTTCCTGAAGTGG...ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp CAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCCACTTCAGGAAATCTaGCCAGATCACCTGAATCCA +
Preference number: 4 (lower is better)
Translates to: QRKAPVLNPHIFLRAHCSPLQEI*PDHLNP
Trigger: TGGATTCAGGTGATCTGGCCAGATTTCCTGAAGTGG...ACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp GTCCAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTTTCCGCCTTGGCAGGTaGCTCACTCTTAAGCTTTCC +
Preference number: 4 (lower is better)
Translates to: VQNQRKAPVLNPHIFLRAFRLGR*LTLKLS
Trigger: GGAAAGCTTAAGAGTGAGCCACCTGCCAAGGCGGAA...AGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGCAACACAGAAGGGTGTaGGAGAGTTCTCTATCTTGG +
Preference number: 4 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQQHRRV*ESSLSW
Trigger: CCAAGATAGAGAACTCTCCCACACCCTTCTGTGTTG...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp TATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAACTAGTGGAGGTTTAAACTaGATTGCCGTCTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: YLKQVCPMAWNIDFCSETSGGLN*IAVSLG
Trigger: TCCCAGGGAGACGGCAATTCAGTTTAAACCTCCACT...AGTTTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp GTCCAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTAGTGGAGGTTTAAACTaGATTGCCGTCTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: VQNQRKAPVLNPHIFLRASGGLN*IAVSLG
Trigger: TCCCAGGGAGACGGCAATTCAGTTTAAACCTCCACT...AGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp CAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACAGTGGAGGTTTAAACTaGATTGCCGTCTCCCTGGGA +
Preference number: 4 (lower is better)
Translates to: QNQRKAPVLNPHIFLRAHSGGLN*IAVSLG
Trigger: TCCCAGGGAGACGGCAATTCAGTTTAAACCTCCACT...GTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp ACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCAGCCATGATACAATGTaGTGGTCAAATTCAGATCCC +
Preference number: 4 (lower is better)
Translates to: TRFKPSYLSQGSLQSGHISHDTM*WSNSDP
Trigger: GGGATCTGAATTTGACCATCACATTGTATCATGGCT...GATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp TGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTTCCACAACGGAGCCATaGTACAATGTGATGGTCAAA +
Preference number: 4 (lower is better)
Translates to: WPYLKQVCPMAWNIDFCSSTTEP*YNVMVK
Trigger: TTTGACCATCACATTGTATCATGGCTCCGTTGTGGA...ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp CAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTATGGAAACAGGGGATTaGATTCAGAGTTTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: QRKAPVLNPHIFLRAHCSMETGD*IQSLVC
Trigger: GCACACCAAACTCTGAATTCAATCCCCTGTTTCCAT...ACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGATGGAAACAGGGGATTaGATTCAGAGTTTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQMETGD*IQSLVC
Trigger: GCACACCAAACTCTGAATTCAATCCCCTGTTTCCAT...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp GTCCAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCCTTCTCAACCTCTGTaGAGACTGGTCCAAAGCATG +
Preference number: 4 (lower is better)
Translates to: VQNQRKAPVLNPHIFLRAPSQPL*RLVQSM
Trigger: CATGCTTTGGACCAGTCTTCACAGAGGTTGAGAAGG...AGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAATTTCTCAGGGCTCACTaGAGTCTGGCCATATCTCAA +
Preference number: 4 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSEFLRAH*SLAISQ
Trigger: TTGAGATATGGCCAGACTGCAGTGAGCCCTGAGAAA...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp ACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCGATGACAATCATGGATaGAGACAGGTACCCAAATAC +
Preference number: 4 (lower is better)
Translates to: TRFKPSYLSQGSLQSGHIDDNHG*RQVPKY
Trigger: GTATTTGGGTACCTGTCTCCATCCATGATTGTCATC...GATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp AGGGCTCACTGCAGTCTGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAATCTGAAACTCCATTCTaGTCCACTCAAATTTATGAT +
Preference number: 4 (lower is better)
Translates to: RAHCSLAISQAGLSNGLESETPF*STQIYD
Trigger: ATCATAAATTTGAGTGGACCAGAATGGAGTTTCAGA...TTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp ACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCCGGAAGATTCCTATCTaGGTACAGTATCCAACATTC +
Preference number: 4 (lower is better)
Translates to: TRFKPSYLSQGSLQSGHIRKIPI*VQYPTF
Trigger: GAATGTTGGATACTGTACCCAGATAGGAATCTTCCG...GATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGATAAGCGGTTCAACTTaGGATACGCAAGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQISGST*DTQGVS
Trigger: AGAGACTCCTTGCGTATCCCAAGTTGAACCGCTTAT...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp TGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTATAAGCGGTTCAACTTaGGATACGCAAGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: WPYLKQVCPMAWNIDFCSISGST*DTQGVS
Trigger: AGAGACTCCTTGCGTATCCCAAGTTGAACCGCTTAT...ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp ACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCGTCTGTCCAATGGCTTaGAACATAGACTTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: TRFKPSYLSQGSLQSGHIVCPMA*NIDFCS
Trigger: ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGAC...GATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAATGGAAACAGGGGATTaGATTCAGAGTTTGGTGTGC +
Preference number: 4 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSEMETGD*IQSLVC
Trigger: GCACACCAAACTCTGAATTCAATCCCCTGTTTCCAT...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp ACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCTTAAAGAACCTTTCCTaGTGTAAGCTTGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: TRFKPSYLSQGSLQSGHILKNLS*CKLGYE
Trigger: CTCATACCCAAGCTTACAGCAGGAAAGGTTCTTTAA...GATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp CAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACCTGCAGAACCATCACTaGTCAGAGGAATTGAGTCAG +
Preference number: 4 (lower is better)
Translates to: QNQRKAPVLNPHIFLRAHLQNHH*SEELSQ
Trigger: CTGACTCAATTCCTCTGAGCAGTGATGGTTCTGCAG...GTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp CAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACCCACTTCAGGAAATCTaGCCAGATCACCTGAATCCA +
Preference number: 4 (lower is better)
Translates to: QNQRKAPVLNPHIFLRAHPLQEI*PDHLNP
Trigger: TGGATTCAGGTGATCTGGCCAGATTTCCTGAAGTGG...GTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGCGGAAGATTCCTATCTaGGTACAGTATCCAACATTC +
Preference number: 4 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQRKIPI*VQYPTF
Trigger: GAATGTTGGATACTGTACCCAGATAGGAATCTTCCG...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp TGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTAAGCTTTCCACTTGTTaGGACACCTCATTAACCAAC +
Preference number: 4 (lower is better)
Translates to: WPYLKQVCPMAWNIDFCSKLSTC*DTSLTN
Trigger: GTTGGTTAATGAGGTGTCCCAACAAGTGGAAAGCTT...ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp CAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTAAGCTTTCCACTTGTTaGGACACCTCATTAACCAAC +
Preference number: 4 (lower is better)
Translates to: QRKAPVLNPHIFLRAHCSKLSTC*DTSLTN
Trigger: GTTGGTTAATGAGGTGTCCCAACAAGTGGAAAGCTT...ACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp CAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACCAACACAGAAGGGTGTaGGAGAGTTCTCTATCTTGG +
Preference number: 4 (lower is better)
Translates to: QNQRKAPVLNPHIFLRAHQHRRV*ESSLSW
Trigger: CCAAGATAGAGAACTCTCCCACACCCTTCTGTGTTG...GTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAATAAGCGGTTCAACTTaGGATACGCAAGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSEISGST*DTQGVS
Trigger: AGAGACTCCTTGCGTATCCCAAGTTGAACCGCTTAT...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp CAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTGTCTGTCCAATGGCTTaGAACATAGACTTTTGCAGT +
Preference number: 4 (lower is better)
Translates to: QRKAPVLNPHIFLRAHCSVCPMA*NIDFCS
Trigger: ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGAC...ACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp TATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAACTTCCACAACGGAGCCATaGTACAATGTGATGGTCAAA +
Preference number: 4 (lower is better)
Translates to: YLKQVCPMAWNIDFCSETSTTEP*YNVMVK
Trigger: TTTGACCATCACATTGTATCATGGCTCCGTTGTGGA...AGTTTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp ACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCGTCCACTCAAATTTATaGTCTGAATCTCTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: TRFKPSYLSQGSLQSGHIVHSNL*SESLKV
Trigger: GACCTTAAGAGATTCAGATCATAAATTTGAGTGGAC...GATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp CAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTGAATTGAGTCAGCAATaGCTGATCTCATCATCTCTT +
Preference number: 4 (lower is better)
Translates to: QRKAPVLNPHIFLRAHCSELSQQ*LISSSL
Trigger: AAGAGATGATGAGATCAGTCATTGCTGACTCAATTC...ACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGGAATTGAGTCAGCAATaGCTGATCTCATCATCTCTT +
Preference number: 4 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQELSQQ*LISSSL
Trigger: AAGAGATGATGAGATCAGTCATTGCTGACTCAATTC...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp ACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCCGTCAACCACACTACTaGACTGTAGATTATTTTCTT +
Preference number: 4 (lower is better)
Translates to: TRFKPSYLSQGSLQSGHIRQPHY*TVDYFL
Trigger: AAGAAAATAATCTACAGTGCAGTAGTGTGGTTGACG...GATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTTAAAGAACCTTTCCTaGTGTAAGCTTGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQLKNLS*CKLGYE
Trigger: CTCATACCCAAGCTTACAGCAGGAAAGGTTCTTTAA...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp TGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTTACGCAAGGAGTCTCTaGAGAGGTACGAAAAATTTA +
Preference number: 4 (lower is better)
Translates to: WPYLKQVCPMAWNIDFCSYARSL*RGTKNL
Trigger: TAAATTTTTCGTACCTCTGCAGAGACTCCTTGCGTA...ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTACGCAAGGAGTCTCTaGAGAGGTACGAAAAATTTA +
Preference number: 4 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQYARSL*RGTKNL
Trigger: TAAATTTTTCGTACCTCTGCAGAGACTCCTTGCGTA...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAGATGACAATCATGGATaGAGACAGGTACCCAAATAC +
Preference number: 4 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSEDDNHG*RQVPKY
Trigger: GTATTTGGGTACCTGTCTCCATCCATGATTGTCATC...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAACGGAAGATTCCTATCTaGGTACAGTATCCAACATTC +
Preference number: 4 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSERKIPI*VQYPTF
Trigger: GAATGTTGGATACTGTACCCAGATAGGAATCTTCCG...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAAAGCTTTCCACTTGTTaGGACACCTCATTAACCAAC +
Preference number: 4 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSEKLSTC*DTSLTN
Trigger: GTTGGTTAATGAGGTGTCCCAACAAGTGGAAAGCTT...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp TATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAACTATAAGCGGTTCAACTTaGGATACGCAAGGAGTCTCT +
Preference number: 4 (lower is better)
Translates to: YLKQVCPMAWNIDFCSETISGST*DTQGVS
Trigger: AGAGACTCCTTGCGTATCCCAAGTTGAACCGCTTAT...AGTTTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp CAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTATTCAATGCATGGATTaGCTTTTAGCAGCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: QRKAPVLNPHIFLRAHCSIQCMD*LLAALR
Trigger: TCTTAAGGCTGCTAAAAGTCAATCCATGCATTGAAT...ACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGATTCAATGCATGGATTaGCTTTTAGCAGCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQIQCMD*LLAALR
Trigger: TCTTAAGGCTGCTAAAAGTCAATCCATGCATTGAAT...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp CAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACAGCCATGATACAATGTaGTGGTCAAATTCAGATCCC +
Preference number: 4 (lower is better)
Translates to: QNQRKAPVLNPHIFLRAHSHDTM*WSNSDP
Trigger: GGGATCTGAATTTGACCATCACATTGTATCATGGCT...GTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp GTCCAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTAGCCATGATACAATGTaGTGGTCAAATTCAGATCCC +
Preference number: 4 (lower is better)
Translates to: VQNQRKAPVLNPHIFLRASHDTM*WSNSDP
Trigger: GGGATCTGAATTTGACCATCACATTGTATCATGGCT...AGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGGTCCACTCAAATTTATaGTCTGAATCTCTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQVHSNL*SESLKV
Trigger: GACCTTAAGAGATTCAGATCATAAATTTGAGTGGAC...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp TGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTCGTCAACCACACTACTaGACTGTAGATTATTTTCTT +
Preference number: 4 (lower is better)
Translates to: WPYLKQVCPMAWNIDFCSRQPHY*TVDYFL
Trigger: AAGAAAATAATCTACAGTGCAGTAGTGTGGTTGACG...ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAATTAAAGAACCTTTCCTaGTGTAAGCTTGGGTATGAG +
Preference number: 4 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSELKNLS*CKLGYE
Trigger: CTCATACCCAAGCTTACAGCAGGAAAGGTTCTTTAA...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR GCA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAATACGCAAGGAGTCTCTaGAGAGGTACGAAAAATTTA +
Preference number: 4 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSEYARSL*RGTKNL
Trigger: TAAATTTTTCGTACCTCTGCAGAGACTCCTTGCGTA...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp ACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCAAATTTTTAACGAACTaGTACCGCTGTCTGTATAGT +
Preference number: 4 (lower is better)
Translates to: TRFKPSYLSQGSLQSGHIKFLTN*YRCLYS
Trigger: ACTATACAGACAGCGGTACCAGTTCGTTAAAAATTT...GATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp GTCCAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCGGAAGATTCCTATCTaGGTACAGTATCCAACATTC +
Preference number: 4 (lower is better)
Translates to: VQNQRKAPVLNPHIFLRARKIPI*VQYPTF
Trigger: GAATGTTGGATACTGTACCCAGATAGGAATCTTCCG...AGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp CAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACAAGCTTTCCACTTGTTaGGACACCTCATTAACCAAC +
Preference number: 4 (lower is better)
Translates to: QNQRKAPVLNPHIFLRAHKLSTC*DTSLTN
Trigger: GTTGGTTAATGAGGTGTCCCAACAAGTGGAAAGCTT...GTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp CAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACGAATTGAGTCAGCAATaGCTGATCTCATCATCTCTT +
Preference number: 4 (lower is better)
Translates to: QNQRKAPVLNPHIFLRAHELSQQ*LISSSL
Trigger: AAGAGATGATGAGATCAGTCATTGCTGACTCAATTC...GTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp TATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAACTGAATTGAGTCAGCAATaGCTGATCTCATCATCTCTT +
Preference number: 4 (lower is better)
Translates to: YLKQVCPMAWNIDFCSETELSQQ*LISSSL
Trigger: AAGAGATGATGAGATCAGTCATTGCTGACTCAATTC...AGTTTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAAAACTAAATTCTAAGTaGGCACAACTATCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSEKLNSK*AQLSLR
Trigger: TCTCAGCGATAGTTGTGCTCACTTAGAATTTAGTTT...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGAAATTTTTAACGAACTaGTACCGCTGTCTGTATAGT +
Preference number: 4 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQKFLTN*YRCLYS
Trigger: ACTATACAGACAGCGGTACCAGTTCGTTAAAAATTT...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp TATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAACTATTCAATGCATGGATTaGCTTTTAGCAGCCTTAAGA +
Preference number: 4 (lower is better)
Translates to: YLKQVCPMAWNIDFCSETIQCMD*LLAALR
Trigger: TCTTAAGGCTGCTAAAAGTCAATCCATGCATTGAAT...AGTTTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp GTCCAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTGTCCACTCAAATTTATaGTCTGAATCTCTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: VQNQRKAPVLNPHIFLRAVHSNL*SESLKV
Trigger: GACCTTAAGAGATTCAGATCATAAATTTGAGTGGAC...AGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp TATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAACTGTCCACTCAAATTTATaGTCTGAATCTCTTAAGGTC +
Preference number: 4 (lower is better)
Translates to: YLKQVCPMAWNIDFCSETVHSNL*SESLKV
Trigger: GACCTTAAGAGATTCAGATCATAAATTTGAGTGGAC...AGTTTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR TCA 90 bp GTCCAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTAAACTAAATTCTAAGTaGGCACAACTATCGCTGAGA +
Preference number: 4 (lower is better)
Translates to: VQNQRKAPVLNPHIFLRAKLNSK*AQLSLR
Trigger: TCTCAGCGATAGTTGTGCTCACTTAGAATTTAGTTT...AGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTGGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAATCTGAAACTCCATTCTaGTCCACTCAAATTTATGAT +
Preference number: 4 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSESETPF*STQIYD
Trigger: ATCATAAATTTGAGTGGACCAGAATGGAGTTTCAGA...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp TATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAACTAAATTTTTAACGAACTaGTACCGCTGTCTGTATAGT +
Preference number: 4 (lower is better)
Translates to: YLKQVCPMAWNIDFCSETKFLTN*YRCLYS
Trigger: ACTATACAGACAGCGGTACCAGTTCGTTAAAAATTT...AGTTTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CCA 90 bp TATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAACTTCTGAAACTCCATTCTaGTCCACTCAAATTTATGAT +
Preference number: 4 (lower is better)
Translates to: YLKQVCPMAWNIDFCSETSETPF*STQIYD
Trigger: ATCATAAATTTGAGTGGACCAGAATGGAGTTTCAGA...AGTTTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS GCA 90 bp CCTCAACTCAGCGCCGCCCTGACGCCCGCGCACGCACGGCCTCGCTaGGTGACGCTACCGCCGCGGCTACGCCGGCGCCCGCACCCGCGC +
Preference number: 5 (lower is better)
Translates to: PQLSAALTPAHARPR*VTLPPRLRRRPHPR
Trigger: GCGCGGGTGCGGGCGCCGGCGTAGCCGCGGCGGTAGCGTCACGCAGCGAGGCCGTGCGTGCGCGGGCGTCAGGGCGGCGCTGAGTTGAGG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000420055.1
CDS GCA 90 bp TTGGCGAGGACCCCTGCGCCTGCCGCGCCGTTGACCCCGCTAGCGTaGGGCTGCGACGCGGCACGGTACGGCAGCTGTTGGCGAAGGCCC +
Preference number: 5 (lower is better)
Translates to: LARTPAPAAPLTPLA*GCDAARYGSCWRRP
Trigger: GGGCCTTCGCCAACAGCTGCCGTACCGTGCCGCGTCGCAGCCGCACGCTAGCGGGGTCAACGGCGCGGCAGGCGCAGGGGTCCTCGCCAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS CCA 90 bp ACCCCGCTAGCGTGCGGCTGCGACGCGGCACGGTACGGCAGCTGTTaGCGAAGGCCCCCAACTCCGAGCGCGTCCGCAGACCGCGAGCCG +
Preference number: 5 (lower is better)
Translates to: TPLACGCDAARYGSC*RRPPTPSASADREP
Trigger: CGGCTCGCGGTCTGCGGACGCGCTCGGAGTTGGGGGCCTTCGCCAACAGCTGCCGTACCGTGCCGCGTCGCAGCCGCACGCTAGCGGGGT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS CCA 90 bp CCCCAACTCCGAGCGCGTCCGCAGACCGCGAGCCGGAAGGCGGCTTaGGCGGCTGTTGAGTTCGTGGCGCTCCCGAGGCGTGGCAAAGGC +
Preference number: 5 (lower is better)
Translates to: PQLRARPQTASRKAA*AAVEFVALPRRGKG
Trigger: GCCTTTGCCACGCCTCGGGAGCGCCACGAACTCAACAGCCGCCCAAGCCGCCTTCCGGCTCGCGGTCTGCGGACGCGCTCGGAGTTGGGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS GCA 90 bp CTCGTGCGCTCTCACGGTCGGCCTTGGGCCCCGGGAGCCTCATGGTaGGCCGAGCTCCGTCCCTCTAGGCTCTCAGTTCCAAGGCGTCGG +
Preference number: 5 (lower is better)
Translates to: LVRSHGRPWAPGASW*AELRPSRLSVPRRR
Trigger: CCGACGCCTTGGAACTGAGAGCCTAGAGGGACGGAGCTCGGCGCACCATGAGGCTCCCGGGGCCCAAGGCCGACCGTGAGAGCGCACGAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS CCA 90 bp CAGCTCGTGCGCTCTCACGGTCGGCCTTGGGCCCCGGGAGCCTCATaGTGCGCCGAGCTCCGTCCCTCTAGGCTCTCAGTTCCAAGGCGT +
Preference number: 5 (lower is better)
Translates to: QLVRSHGRPWAPGAS*CAELRPSRLSVPRR
Trigger: ACGCCTTGGAACTGAGAGCCTAGAGGGACGGAGCTCGGCGCACCATGAGGCTCCCGGGGCCCAAGGCCGACCGTGAGAGCGCACGAGCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS CCA 90 bp AGAGAATCAGCACTGACTCAGCTCGTGCGCTCTCACGGTCGGCCTTaGGCCCCGGGAGCCTCATGGTGCGCCGAGCTCCGTCCCTCTAGG +
Preference number: 5 (lower is better)
Translates to: RESALTQLVRSHGRP*APGASWCAELRPSR
Trigger: CCTAGAGGGACGGAGCTCGGCGCACCATGAGGCTCCCGGGGCCCAAGGCCGACCGTGAGAGCGCACGAGCTGAGTCAGTGCTGATTCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS-3UTR CAA 90 bp AGGGCTCACTGCAGTCTGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACTCTCACGGTCGGCCTaGGGCCCCGGGAGCCTCATG +
Preference number: 5 (lower is better)
Translates to: RAHCSLAISQAGLSNGLELSRSA*GPGSLM
Trigger: CATGAGGCTCCCGGGGCCCAAGGCCGACCGTGAGAG...TTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS GCA 90 bp TTCCAAGGCGTCGGTTTTGCGTCTCGTAACGGCCGCTGTGGCGCATaGCCAGAAGCCATTTTCAAGGTCCTCTTCCGAACCTTGGCGAGG +
Preference number: 5 (lower is better)
Translates to: FQGVGFASRNGRCGA*PEAIFKVLFRTLAR
Trigger: CCTCGCCAAGGTTCGGAAGAGGACCTTGAAAATGGCTTCTGGGCATGCGCCACAGCGGCCGTTACGAGACGCAAAACCGACGCCTTGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS-3UTR CAA 90 bp ACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCGTCCTCTTCCGAACCTaGGCGAGGACCCCTGCGCCT +
Preference number: 5 (lower is better)
Translates to: TRFKPSYLSQGSLQSGHIVLFRT*ARTPAP
Trigger: AGGCGCAGGGGTCCTCGCCAAGGTTCGGAAGAGGAC...GATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS CCA 90 bp GGCTTATCACCCCGTTCCCCAGCCTGTTCTTTCCGCCTTGGCAGGTaGCTCACTCTTAAGCTTTCCACTTGTTGGGACACCTCATTAACC +
Preference number: 5 (lower is better)
Translates to: GLSPRSPACSFRLGR*LTLKLSTCWDTSLT
Trigger: GGTTAATGAGGTGTCCCAACAAGTGGAAAGCTTAAGAGTGAGCCACCTGCCAAGGCGGAAAGAACAGGCTGGGGAACGGGGTGATAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000651461.1
CDS TCA 90 bp AGAAGGGTGTGGGAGAGTTCTCTATCTTGGCCTTCTCAACCTCTGTaGAGACTGGTCCAAAGCATGGGACAGGGGCCTTTGAGCCACCAA +
Preference number: 5 (lower is better)
Translates to: RRVWESSLSWPSQPL*RLVQSMGQGPLSHQ
Trigger: TTGGTGGCTCAAAGGCCCCTGTCCCATGCTTTGGACCAGTCTTCACAGAGGTTGAGAAGGCCAAGATAGAGAACTCTCCCACACCCTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp TATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAACTCGGCTTGGGCGGCTGTaGAGTTCGTGGCGCTCCCGA +
Preference number: 5 (lower is better)
Translates to: YLKQVCPMAWNIDFCSETRLGRL*SSWRSR
Trigger: TCGGGAGCGCCACGAACTCAACAGCCGCCCAAGCCG...AGTTTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS-3UTR CAA 90 bp GCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATACCAACGCTTCTGTCTTaGTACGGGCCGTCGCTTCCA +
Preference number: 5 (lower is better)
Translates to: APVLNPHIFLRAHCSLAIPTLLS*YGPSLP
Trigger: TGGAAGCGACGGCCCGTACAAAGACAGAAGCGTTGG...TATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370031.5
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp GCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATAATGGGACAGGGGCCTTaGAGCCACCAATGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: APVLNPHIFLRAHCSLAIMGQGP*SHQCLW
Trigger: CCAAAGACATTGGTGGCTCAAAGGCCCCTGTCCCAT...TATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp AGGGCTCACTGCAGTCTGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAAGCGGTTCAACTaGGGATACGCAAGGAGTCTC +
Preference number: 5 (lower is better)
Translates to: RAHCSLAISQAGLSNGLEHKRFN*GYARSL
Trigger: GAGACTCCTTGCGTATCCCAAGTTGAACCGCTTATG...TTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp ACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCATGGGACAGGGGCCTTaGAGCCACCAATGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: TRFKPSYLSQGSLQSGHIMGQGP*SHQCLW
Trigger: CCAAAGACATTGGTGGCTCAAAGGCCCCTGTCCCAT...GATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp AGGGCTCACTGCAGTCTGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAAGGTCTGTCCAATGGCTaGGAACATAGACTTTTGCAG +
Preference number: 5 (lower is better)
Translates to: RAHCSLAISQAGLSNGLEGLSNG*EHRLLQ
Trigger: CTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACC...TTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp CAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTCCAAGGCGTCGGTTTaGCGTCTCGTAACGGCCGCT +
Preference number: 5 (lower is better)
Translates to: QNQRKAPVLNPHIFLRAHSKASV*RLVTAA
Trigger: AGCGGCCGTTACGAGACGCAAAACCGACGCCTTGGA...GTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS-3UTR CAA 90 bp TGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTCCTGTTCTTTCCGCCTaGGCAGGTGGCTCACTCTTA +
Preference number: 5 (lower is better)
Translates to: WPYLKQVCPMAWNIDFCSPVLSA*AGGSLL
Trigger: TAAGAGTGAGCCACCTGCCAAGGCGGAAAGAACAGG...ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS CCA 90 bp GAAGATTCCTATCTGGGTACAGTATCCAACATTCTCAGCTCCAGCTaGTGGTTCCCCGACACCAGTAAACTCCACAGAGTAATCATAGCG +
Preference number: 5 (lower is better)
Translates to: EDSYLGTVSNILSSS*WFPDTSKLHRVIIA
Trigger: CGCTATGATTACTCTGTGGAGTTTACTGGTGTCGGGGAACCACCAGCTGGAGCTGAGAATGTTGGATACTGTACCCAGATAGGAATCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000483729.1
ENST00000493676.1
ENST00000651461.1
CDS CCA 90 bp CATGATTCTGTTGCCTTTCCTCCATTTTTCCGGAAGATTCCTATCTaGGTACAGTATCCAACATTCTCAGCTCCAGCTGGTGGTTCCCCG +
Preference number: 5 (lower is better)
Translates to: HDSVAFPPFFRKIPI*VQYPTFSAPAGGSP
Trigger: CGGGGAACCACCAGCTGGAGCTGAGAATGTTGGATACTGTACCCAGATAGGAATCTTCCGGAAAAATGGAGGAAAGGCAACAGAATCATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000483729.1
ENST00000493676.1
ENST00000651461.1
CDS-3UTR CAA 90 bp AGGGCTCACTGCAGTCTGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAAAGTAATCATAGCGATTaGCCACATATAAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: RAHCSLAISQAGLSNGLESNHSD*PHIKPR
Trigger: CCTGGGCTTTATATGTGGCAAATCGCTATGATTACT...TTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCAGACTGCAGTGAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp ACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCGGAGAGTTCTCTATCTaGGCCTTCTCAACCTCTGTG +
Preference number: 5 (lower is better)
Translates to: TRFKPSYLSQGSLQSGHIGEFSI*AFSTSV
Trigger: CACAGAGGTTGAGAAGGCCAAGATAGAGAACTCTCC...GATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp ACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCTGGCCATATCCATAAGCGGTTCAACTaGGGATACGCAAGGAGTCTC +
Preference number: 5 (lower is better)
Translates to: TRFKPSYLSQGSLQSGHIHKRFN*GYARSL
Trigger: GAGACTCCTTGCGTATCCCAAGTTGAACCGCTTATG...GATATGGCCAGACTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp GTCCAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCCAACGCTTCTGTCTTaGTACGGGCCGTCGCTTCCA +
Preference number: 5 (lower is better)
Translates to: VQNQRKAPVLNPHIFLRAPTLLS*YGPSLP
Trigger: TGGAAGCGACGGCCCGTACAAAGACAGAAGCGTTGG...AGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000370031.5
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp TATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAACTCCAACGCTTCTGTCTTaGTACGGGCCGTCGCTTCCA +
Preference number: 5 (lower is better)
Translates to: YLKQVCPMAWNIDFCSETPTLLS*YGPSLP
Trigger: TGGAAGCGACGGCCCGTACAAAGACAGAAGCGTTGG...AGTTTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000370031.5
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGGGGCAGGAGGATTGCTaGAGGATGGAAGTTCAAGAC +
Preference number: 5 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQGQEDC*RMEVQD
Trigger: GTCTTGAACTTCCATCCTCAAGCAATCCTCCTGCCC...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370031.5
CDS TCA 90 bp CAAGCAAACGAGAGTCTCTCTCCACAACGGAGCCATGATACAATGTaGTGGTCAAATTCAGATCCCGAGGTTTCAGAAAATCCCCCAGGA +
Preference number: 5 (lower is better)
Translates to: QANESLSPQRSHDTM*WSNSDPEVSENPPG
Trigger: TCCTGGGGGATTTTCTGAAACCTCGGGATCTGAATTTGACCATCACATTGTATCATGGCTCCGTTGTGGAGAGAGACTCTCGTTTGCTTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000493676.1
ENST00000651461.1
CDS CCA 90 bp GATTCCTATCTGGGTACAGTATCCAACATTCTCAGCTCCAGCTGGTaGTTCCCCGACACCAGTAAACTCCACAGAGTAATCATAGCGATT +
Preference number: 5 (lower is better)
Translates to: DSYLGTVSNILSSSW*FPDTSKLHRVIIAI
Trigger: AATCGCTATGATTACTCTGTGGAGTTTACTGGTGTCGGGGAACCACCAGCTGGAGCTGAGAATGTTGGATACTGTACCCAGATAGGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000483729.1
ENST00000493676.1
ENST00000651461.1
CDS-3UTR CAA 90 bp CAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACCCTGTTCTTTCCGCCTaGGCAGGTGGCTCACTCTTA +
Preference number: 5 (lower is better)
Translates to: QNQRKAPVLNPHIFLRAHPVLSA*AGGSLL
Trigger: TAAGAGTGAGCCACCTGCCAAGGCGGAAAGAACAGG...GTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp TATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAACTATGGGACAGGGGCCTTaGAGCCACCAATGTCTTTGG +
Preference number: 5 (lower is better)
Translates to: YLKQVCPMAWNIDFCSETMGQGP*SHQCLW
Trigger: CCAAAGACATTGGTGGCTCAAAGGCCCCTGTCCCAT...AGTTTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGGGAGAGTTCTCTATCTaGGCCTTCTCAACCTCTGTG +
Preference number: 5 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQGEFSI*AFSTSV
Trigger: CACAGAGGTTGAGAAGGCCAAGATAGAGAACTCTCC...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp TGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTCATAAGCGGTTCAACTaGGGATACGCAAGGAGTCTC +
Preference number: 5 (lower is better)
Translates to: WPYLKQVCPMAWNIDFCSHKRFN*GYARSL
Trigger: GAGACTCCTTGCGTATCCCAAGTTGAACCGCTTATG...ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGCATAAGCGGTTCAACTaGGGATACGCAAGGAGTCTC +
Preference number: 5 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQHKRFN*GYARSL
Trigger: GAGACTCCTTGCGTATCCCAAGTTGAACCGCTTATG...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS CCA 90 bp CAGGGGATTGAATTCAGAGTTTGGTGTGCTGATGACAATCATGGATaGAGACAGGTACCCAAATACCACTTCAGGAAATCTGGCCAGATC +
Preference number: 5 (lower is better)
Translates to: QGIEFRVWCADDNHG*RQVPKYHFRKSGQI
Trigger: GATCTGGCCAGATTTCCTGAAGTGGTATTTGGGTACCTGTCTCCATCCATGATTGTCATCAGCACACCAAACTCTGAATTCAATCCCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000483729.1
ENST00000493676.1
ENST00000651461.1
CDS-3UTR CAA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAGGAGAGTTCTCTATCTaGGCCTTCTCAACCTCTGTG +
Preference number: 5 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSEGEFSI*AFSTSV
Trigger: CACAGAGGTTGAGAAGGCCAAGATAGAGAACTCTCC...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGGGTCTGTCCAATGGCTaGGAACATAGACTTTTGCAG +
Preference number: 5 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQGLSNG*EHRLLQ
Trigger: CTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACC...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp GTCCAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTGATGGGGCAGGAGGATaGCTTGAGGATGGAAGTTCA +
Preference number: 5 (lower is better)
Translates to: VQNQRKAPVLNPHIFLRADGAGG*LEDGSS
Trigger: TGAACTTCCATCCTCAAGCAATCCTCCTGCCCCATC...AGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTGGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000370031.5
CDS GCA 90 bp TCATTAGCACATAAGCGGTTCAACTTGGGATACGCAAGGAGTCTCTaGAGAGGTACGAAAAATTTATCTCCAACACAGAAGGGTGTGGGA +
Preference number: 5 (lower is better)
Translates to: SLAHKRFNLGYARSL*RGTKNLSPTQKGVG
Trigger: TCCCACACCCTTCTGTGTTGGAGATAAATTTTTCGTACCTCTGCAGAGACTCCTTGCGTATCCCAAGTTGAACCGCTTATGTGCTAATGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp GTCCAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTGGAGAGTTCTCTATCTaGGCCTTCTCAACCTCTGTG +
Preference number: 5 (lower is better)
Translates to: VQNQRKAPVLNPHIFLRAGEFSI*AFSTSV
Trigger: CACAGAGGTTGAGAAGGCCAAGATAGAGAACTCTCC...AGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTGGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAGGTCTGTCCAATGGCTaGGAACATAGACTTTTGCAG +
Preference number: 5 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSEGLSNG*EHRLLQ
Trigger: CTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACC...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGTCCTTCAAGCTCTATTaGAGAGAATCAGCACTGACT +
Preference number: 5 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQSFKLY*RESALT
Trigger: AGTCAGTGCTGATTCTCTCAAATAGAGCTTGAAGGA...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS TCA 90 bp TTTTTAACGAACTGGTACCGCTGTCTGTATAGTGGAGGTTTAAACTaGATTGCCGTCTCCCTGGGAACTTCTTCAAAATTACCGTCAACC +
Preference number: 5 (lower is better)
Translates to: FLTNWYRCLYSGGLN*IAVSLGTSSKLPST
Trigger: GGTTGACGGTAATTTTGAAGAAGTTCCCAGGGAGACGGCAATTCAGTTTAAACCTCCACTATACAGACAGCGGTACCAGTTCGTTAAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000493676.1
ENST00000651461.1
CDS TCA 90 bp AAGTCAAATCCAAGCAAACGAGAGTCTCTCTCCACAACGGAGCCATaGTACAATGTGATGGTCAAATTCAGATCCCGAGGTTTCAGAAAA +
Preference number: 5 (lower is better)
Translates to: KSNPSKRESLSTTEP*YNVMVKFRSRGFRK
Trigger: TTTTCTGAAACCTCGGGATCTGAATTTGACCATCACATTGTATCATGGCTCCGTTGTGGAGAGAGACTCTCGTTTGCTTGGATTTGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000493676.1
ENST00000651461.1
CDS-3UTR CAA 90 bp CCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTGAAAGTAATCATAGCGATTaGCCACATATAAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: PYLKQVCPMAWNIDFCSESNHSD*PHIKPR
Trigger: CCTGGGCTTTATATGTGGCAAATCGCTATGATTACT...TTCACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS GCA 90 bp TGTTGGGACACCTCATTAACCAACACAAGTTTAAAGAACCTTTCCTaGTGTAAGCTTGGGTATGAGGTGGTAAAAACCTGTAATCTCAGC +
Preference number: 5 (lower is better)
Translates to: CWDTSLTNTSLKNLS*CKLGYEVVKTCNLS
Trigger: GCTGAGATTACAGGTTTTTACCACCTCATACCCAAGCTTACAGCAGGAAAGGTTCTTTAAACTTGTGTTGGTTAATGAGGTGTCCCAACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370031.5
CDS-3UTR CAA 90 bp TCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACTGCAGAATTCAATGCATGGATaGACTTTTAGCAGCCTTAAG +
Preference number: 5 (lower is better)
Translates to: SKESTRFKPSYLSQGSLQNSMHG*TFSSLK
Trigger: CTTAAGGCTGCTAAAAGTCAATCCATGCATTGAATT...CTGCAGTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp TGGCCATATCTCAAGCAGGTCTGTCCAATGGCTTGGAACATAGACTTTTGCAGTAATTCAATGCATGGATaGACTTTTAGCAGCCTTAAG +
Preference number: 5 (lower is better)
Translates to: WPYLKQVCPMAWNIDFCSNSMHG*TFSSLK
Trigger: CTTAAGGCTGCTAAAAGTCAATCCATGCATTGAATT...ACTGCAAAAGTCTATGTTCCAAGCCATTGGACAGACCTGCTTGAGATATGGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS-3UTR CAA 90 bp GTCCAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTAGTAATCATAGCGATTaGCCACATATAAAGCCCAGG +
Preference number: 5 (lower is better)
Translates to: VQNQRKAPVLNPHIFLRASNHSD*PHIKPR
Trigger: CCTGGGCTTTATATGTGGCAAATCGCTATGATTACT...AGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTGGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS CCA 90 bp CAATCATGGATGGAGACAGGTACCCAAATACCACTTCAGGAAATCTaGCCAGATCACCTGAATCCAAATGTTCTATTAATTCAATACACG +
Preference number: 5 (lower is better)
Translates to: QSWMETGTQIPLQEI*PDHLNPNVLLIQYT
Trigger: CGTGTATTGAATTAATAGAACATTTGGATTCAGGTGATCTGGCCAGATTTCCTGAAGTGGTATTTGGGTACCTGTCTCCATCCATGATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000493676.1
ENST00000651461.1
CDS-3UTR CAA 90 bp CAAAATCAAAGGAAAGCACCCGTTTTAAACCCTCATATCTTTCTCAGGGCTCACAATTCAATGCATGGATaGACTTTTAGCAGCCTTAAG +
Preference number: 5 (lower is better)
Translates to: QNQRKAPVLNPHIFLRAHNSMHG*TFSSLK
Trigger: CTTAAGGCTGCTAAAAGTCAATCCATGCATTGAATT...GTGAGCCCTGAGAAAGATATGAGGGTTTAAAACGGGTGCTTTCCTTTGATTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS CAA 72 bp CGAACCTTGGCGAGGACCCCTGCGCCTGCCGCGCCGTaGACCCCGCTAGCGTGCGGCTGCGACGCGGCACGG +
Preference number: 6 (lower is better)
Translates to: RTLARTPAPAAP*TPLACGCDAAR
Trigger: CCGTGCCGCGTCGCAGCCGCACGCTAGCGGGGTCAACGGCGCGGCAGGCGCAGGGGTCCTCGCCAAGGTTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS GCA 72 bp GCGCCTGCCGCGCCGTTGACCCCGCTAGCGTGCGGCTaGGACGCGGCACGGTACGGCAGCTGTTGGCGAAGG +
Preference number: 6 (lower is better)
Translates to: APAAPLTPLACG*DAARYGSCWRR
Trigger: CCTTCGCCAACAGCTGCCGTACCGTGCCGCGTCGCAGCCGCACGCTAGCGGGGTCAACGGCGCGGCAGGCGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS GCA 72 bp ACCCCTGCGCCTGCCGCGCCGTTGACCCCGCTAGCGTaGGGCTGCGACGCGGCACGGTACGGCAGCTGTTGG +
Preference number: 6 (lower is better)
Translates to: TPAPAAPLTPLA*GCDAARYGSCW
Trigger: CCAACAGCTGCCGTACCGTGCCGCGTCGCAGCCGCACGCTAGCGGGGTCAACGGCGCGGCAGGCGCAGGGGT
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS CAA 90 bp GACCCCGCTAGCGTGCGGCTGCGACGCGGCACGGTACGGCAGCTGTaGGCGAAGGCCCCCAACTCCGAGCGCGTCCGCAGACCGCGAGCC +
Preference number: 6 (lower is better)
Translates to: DPASVRLRRGTVRQL*AKAPNSERVRRPRA
Trigger: GGCTCGCGGTCTGCGGACGCGCTCGGAGTTGGGGGCCTTCGCCAACAGCTGCCGTACCGTGCCGCGTCGCAGCCGCACGCTAGCGGGGTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS CCA 72 bp CGAGCGCGTCCGCAGACCGCGAGCCGGAAGGCGGCTTaGGCGGCTGTTGAGTTCGTGGCGCTCCCGAGGCGT +
Preference number: 6 (lower is better)
Translates to: RARPQTASRKAA*AAVEFVALPRR
Trigger: ACGCCTCGGGAGCGCCACGAACTCAACAGCCGCCCAAGCCGCCTTCCGGCTCGCGGTCTGCGGACGCGCTCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS CCA 72 bp GCGTGCGGCTGCGACGCGGCACGGTACGGCAGCTGTTaGCGAAGGCCCCCAACTCCGAGCGCGTCCGCAGAC +
Preference number: 6 (lower is better)
Translates to: ACGCDAARYGSC*RRPPTPSASAD
Trigger: GTCTGCGGACGCGCTCGGAGTTGGGGGCCTTCGCCAACAGCTGCCGTACCGTGCCGCGTCGCAGCCGCACGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS CAA 90 bp GTCCTCTTCCGAACCTTGGCGAGGACCCCTGCGCCTGCCGCGCCGTaGACCCCGCTAGCGTGCGGCTGCGACGCGGCACGGTACGGCAGC +
Preference number: 6 (lower is better)
Translates to: VLFRTLARTPAPAAP*TPLACGCDAARYGS
Trigger: GCTGCCGTACCGTGCCGCGTCGCAGCCGCACGCTAGCGGGGTCAACGGCGCGGCAGGCGCAGGGGTCCTCGCCAAGGTTCGGAAGAGGAC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS GCA 72 bp GGTCCTCTTCCGAACCTTGGCGAGGACCCCTGCGCCTaGCGCGCCGTTGACCCCGCTAGCGTGCGGCTGCGA +
Preference number: 6 (lower is better)
Translates to: GPLPNLGEDPCA*RAVDPASVRLR
Trigger: TCGCAGCCGCACGCTAGCGGGGTCAACGGCGCGGCAGGCGCAGGGGTCCTCGCCAAGGTTCGGAAGAGGACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS CAA 72 bp CGCAGACCGCGAGCCGGAAGGCGGCTTGGGCGGCTGTaGAGTTCGTGGCGCTCCCGAGGCGTGGCAAAGGCC +
Preference number: 6 (lower is better)
Translates to: RRPRAGRRLGRL*SSWRSRGVAKA
Trigger: GGCCTTTGCCACGCCTCGGGAGCGCCACGAACTCAACAGCCGCCCAAGCCGCCTTCCGGCTCGCGGTCTGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS CAA 72 bp AGCGTGCGGCTGCGACGCGGCACGGTACGGCAGCTGTaGGCGAAGGCCCCCAACTCCGAGCGCGTCCGCAGA +
Preference number: 6 (lower is better)
Translates to: SVRLRRGTVRQL*AKAPNSERVRR
Trigger: TCTGCGGACGCGCTCGGAGTTGGGGGCCTTCGCCAACAGCTGCCGTACCGTGCCGCGTCGCAGCCGCACGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS TCA 72 bp GCAGACCGCGAGCCGGAAGGCGGCTTGGGCGGCTGTTaGGTTCGTGGCGCTCCCGAGGCGTGGCAAAGGCCT +
Preference number: 6 (lower is better)
Translates to: ADREPEGGLGGC*VRGAPEAWQRP
Trigger: AGGCCTTTGCCACGCCTCGGGAGCGCCACGAACTCAACAGCCGCCCAAGCCGCCTTCCGGCTCGCGGTCTGC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS CCA 72 bp GCACTGACTCAGCTCGTGCGCTCTCACGGTCGGCCTTaGGCCCCGGGAGCCTCATGGTGCGCCGAGCTCCGT +
Preference number: 6 (lower is better)
Translates to: ALTQLVRSHGRP*APGASWCAELR
Trigger: ACGGAGCTCGGCGCACCATGAGGCTCCCGGGGCCCAAGGCCGACCGTGAGAGCGCACGAGCTGAGTCAGTGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS CAA 72 bp AGCACTGACTCAGCTCGTGCGCTCTCACGGTCGGCCTaGGGCCCCGGGAGCCTCATGGTGCGCCGAGCTCCG +
Preference number: 6 (lower is better)
Translates to: STDSARALSRSA*GPGSLMVRRAP
Trigger: CGGAGCTCGGCGCACCATGAGGCTCCCGGGGCCCAAGGCCGACCGTGAGAGCGCACGAGCTGAGTCAGTGCT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS CCA 72 bp CGCTCTCACGGTCGGCCTTGGGCCCCGGGAGCCTCATaGTGCGCCGAGCTCCGTCCCTCTAGGCTCTCAGTT +
Preference number: 6 (lower is better)
Translates to: RSHGRPWAPGAS*CAELRPSRLSV
Trigger: AACTGAGAGCCTAGAGGGACGGAGCTCGGCGCACCATGAGGCTCCCGGGGCCCAAGGCCGACCGTGAGAGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS GCA 72 bp TTTCAAGGTCCTCTTCCGAACCTTGGCGAGGACCCCTaGGCCTGCCGCGCCGTTGACCCCGCTAGCGTGCGG +
Preference number: 6 (lower is better)
Translates to: FQGPLPNLGEDP*ACRAVDPASVR
Trigger: CCGCACGCTAGCGGGGTCAACGGCGCGGCAGGCGCAGGGGTCCTCGCCAAGGTTCGGAAGAGGACCTTGAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS GCA 72 bp TCTCACGGTCGGCCTTGGGCCCCGGGAGCCTCATGGTaGGCCGAGCTCCGTCCCTCTAGGCTCTCAGTTCCA +
Preference number: 6 (lower is better)
Translates to: SHGRPWAPGASW*AELRPSRLSVP
Trigger: TGGAACTGAGAGCCTAGAGGGACGGAGCTCGGCGCACCATGAGGCTCCCGGGGCCCAAGGCCGACCGTGAGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS CAA 72 bp TGCCCAGAAGCCATTTTCAAGGTCCTCTTCCGAACCTaGGCGAGGACCCCTGCGCCTGCCGCGCCGTTGACC +
Preference number: 6 (lower is better)
Translates to: CPEAIFKVLFRT*ARTPAPAAPLT
Trigger: GGTCAACGGCGCGGCAGGCGCAGGGGTCCTCGCCAAGGTTCGGAAGAGGACCTTGAAAATGGCTTCTGGGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000370032.9
CDS CCA 72 bp CCCCGTTCCCCAGCCTGTTCTTTCCGCCTTGGCAGGTaGCTCACTCTTAAGCTTTCCACTTGTTGGGACACC +
Preference number: 6 (lower is better)
Translates to: PRSPACSFRLGR*LTLKLSTCWDT
Trigger: GGTGTCCCAACAAGTGGAAAGCTTAAGAGTGAGCCACCTGCCAAGGCGGAAAGAACAGGCTGGGGAACGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000651461.1
CDS CAA 90 bp TGTCTTTGGGCTTATCACCCCGTTCCCCAGCCTGTTCTTTCCGCCTaGGCAGGTGGCTCACTCTTAAGCTTTCCACTTGTTGGGACACCT +
Preference number: 6 (lower is better)
Translates to: CLWAYHPVPQPVLSA*AGGSLLSFPLVGTP
Trigger: AGGTGTCCCAACAAGTGGAAAGCTTAAGAGTGAGCCACCTGCCAAGGCGGAAAGAACAGGCTGGGGAACGGGGTGATAAGCCCAAAGACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000651461.1
CDS CAA 72 bp GCTTATCACCCCGTTCCCCAGCCTGTTCTTTCCGCCTaGGCAGGTGGCTCACTCTTAAGCTTTCCACTTGTT +
Preference number: 6 (lower is better)
Translates to: AYHPVPQPVLSA*AGGSLLSFPLV
Trigger: AACAAGTGGAAAGCTTAAGAGTGAGCCACCTGCCAAGGCGGAAAGAACAGGCTGGGGAACGGGGTGATAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000651461.1
CDS TCA 72 bp TGGGAGAGTTCTCTATCTTGGCCTTCTCAACCTCTGTaGAGACTGGTCCAAAGCATGGGACAGGGGCCTTTG +
Preference number: 6 (lower is better)
Translates to: WESSLSWPSQPL*RLVQSMGQGPL
Trigger: CAAAGGCCCCTGTCCCATGCTTTGGACCAGTCTTCACAGAGGTTGAGAAGGCCAAGATAGAGAACTCTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS CAA 72 bp ATCAGCACTGACTCAGTGAAACCAACGCTTCTGTCTTaGTACGGGCCGTCGCTTCCATCATCCTGCGGTAAG +
Preference number: 6 (lower is better)
Translates to: ISTDSVKPTLLS*YGPSLPSSCGK
Trigger: CTTACCGCAGGATGATGGAAGCGACGGCCCGTACAAAGACAGAAGCGTTGGTTTCACTGAGTCAGTGCTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000402983.5
ENST00000420055.1
ENST00000651461.1
CDS CAA 72 bp CAACCACACTACTGCATGAAACCAACGCTTCTGTCTTaGTACGGGCCGTCGCTTCCATCATCCTGCGGTAAG +
Preference number: 6 (lower is better)
Translates to: QPHYCMKPTLLS*YGPSLPSSCGK
Trigger: CTTACCGCAGGATGATGGAAGCGACGGCCCGTACAAAGACAGAAGCGTTGGTTTCATGCAGTAGTGTGGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000493676.1
CDS CCA 72 bp CTGGGTACAGTATCCAACATTCTCAGCTCCAGCTGGTaGTTCCCCGACACCAGTAAACTCCACAGAGTAATC +
Preference number: 6 (lower is better)
Translates to: LGTVSNILSSSW*FPDTSKLHRVI
Trigger: GATTACTCTGTGGAGTTTACTGGTGTCGGGGAACCACCAGCTGGAGCTGAGAATGTTGGATACTGTACCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000483729.1
ENST00000493676.1
ENST00000651461.1
CDS CCA 72 bp TATCTGGGTACAGTATCCAACATTCTCAGCTCCAGCTaGTGGTTCCCCGACACCAGTAAACTCCACAGAGTA +
Preference number: 6 (lower is better)
Translates to: YLGTVSNILSSS*WFPDTSKLHRV
Trigger: TACTCTGTGGAGTTTACTGGTGTCGGGGAACCACCAGCTGGAGCTGAGAATGTTGGATACTGTACCCAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000483729.1
ENST00000493676.1
ENST00000651461.1
CDS CAA 72 bp TCTCCAACACAGAAGGGTGTGGGAGAGTTCTCTATCTaGGCCTTCTCAACCTCTGTGAAGACTGGTCCAAAG +
Preference number: 6 (lower is better)
Translates to: SPTQKGVGEFSI*AFSTSVKTGPK
Trigger: CTTTGGACCAGTCTTCACAGAGGTTGAGAAGGCCAAGATAGAGAACTCTCCCACACCCTTCTGTGTTGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS TCA 72 bp CCAAGCAAACGAGAGTCTCTCTCCACAACGGAGCCATaGTACAATGTGATGGTCAAATTCAGATCCCGAGGT +
Preference number: 6 (lower is better)
Translates to: PSKRESLSTTEP*YNVMVKFRSRG
Trigger: ACCTCGGGATCTGAATTTGACCATCACATTGTATCATGGCTCCGTTGTGGAGAGAGACTCTCGTTTGCTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000493676.1
ENST00000651461.1
CDS CCA 72 bp GTTGCCTTTCCTCCATTTTTCCGGAAGATTCCTATCTaGGTACAGTATCCAACATTCTCAGCTCCAGCTGGT +
Preference number: 6 (lower is better)
Translates to: VAFPPFFRKIPI*VQYPTFSAPAG
Trigger: ACCAGCTGGAGCTGAGAATGTTGGATACTGTACCCAGATAGGAATCTTCCGGAAAAATGGAGGAAAGGCAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000483729.1
ENST00000493676.1
ENST00000651461.1
CDS CAA 90 bp AAAAATTTATCTCCAACACAGAAGGGTGTGGGAGAGTTCTCTATCTaGGCCTTCTCAACCTCTGTGAAGACTGGTCCAAAGCATGGGACA +
Preference number: 6 (lower is better)
Translates to: KNLSPTQKGVGEFSI*AFSTSVKTGPKHGT
Trigger: TGTCCCATGCTTTGGACCAGTCTTCACAGAGGTTGAGAAGGCCAAGATAGAGAACTCTCCCACACCCTTCTGTGTTGGAGATAAATTTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS TCA 72 bp CCACATCCCAGGTCTGCAACCTTCTTAGGCTCATGTTaGTCCACTAAATTTTTAACGAACTGGTACCGCTGT +
Preference number: 6 (lower is better)
Translates to: PHPRSATFLGSC*STKFLTNWYRC
Trigger: ACAGCGGTACCAGTTCGTTAAAAATTTAGTGGATCAACATGAGCCTAAGAAGGTTGCAGACCTGGGATGTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000651461.1
CDS CCA 72 bp GAGGTACGAAAAATTTATCTCCAACACAGAAGGGTGTaGGAGAGTTCTCTATCTTGGCCTTCTCAACCTCTG +
Preference number: 6 (lower is better)
Translates to: EVRKIYLQHRRV*ESSLSWPSQPL
Trigger: CAGAGGTTGAGAAGGCCAAGATAGAGAACTCTCCCACACCCTTCTGTGTTGGAGATAAATTTTTCGTACCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS CAA 72 bp CTCATCATCTCTTCATTAGCACATAAGCGGTTCAACTaGGGATACGCAAGGAGTCTCTGCAGAGGTACGAAA +
Preference number: 6 (lower is better)
Translates to: LIISSLAHKRFN*GYARSLCRGTK
Trigger: TTTCGTACCTCTGCAGAGACTCCTTGCGTATCCCAAGTTGAACCGCTTATGTGCTAATGAAGAGATGATGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS TCA 72 bp GAGAGTCTCTCTCCACAACGGAGCCATGATACAATGTaGTGGTCAAATTCAGATCCCGAGGTTTCAGAAAAT +
Preference number: 6 (lower is better)
Translates to: ESLSPQRSHDTM*WSNSDPEVSEN
Trigger: ATTTTCTGAAACCTCGGGATCTGAATTTGACCATCACATTGTATCATGGCTCCGTTGTGGAGAGAGACTCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000493676.1
ENST00000651461.1
CDS GCA 72 bp CATAAGCGGTTCAACTTGGGATACGCAAGGAGTCTCTaGAGAGGTACGAAAAATTTATCTCCAACACAGAAG +
Preference number: 6 (lower is better)
Translates to: HKRFNLGYARSL*RGTKNLSPTQK
Trigger: CTTCTGTGTTGGAGATAAATTTTTCGTACCTCTGCAGAGACTCCTTGCGTATCCCAAGTTGAACCGCTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS CCA 72 bp CTTGGCAGGTGGCTCACTCTTAAGCTTTCCACTTGTTaGGACACCTCATTAACCAACACAAGTTTAAAGAAC +
Preference number: 6 (lower is better)
Translates to: LGRWLTLKLSTC*DTSLTNTSLKN
Trigger: GTTCTTTAAACTTGTGTTGGTTAATGAGGTGTCCCAACAAGTGGAAAGCTTAAGAGTGAGCCACCTGCCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000651461.1
CDS TCA 72 bp AACTGGTACCGCTGTCTGTATAGTGGAGGTTTAAACTaGATTGCCGTCTCCCTGGGAACTTCTTCAAAATTA +
Preference number: 6 (lower is better)
Translates to: NWYRCLYSGGLN*IAVSLGTSSKL
Trigger: TAATTTTGAAGAAGTTCCCAGGGAGACGGCAATTCAGTTTAAACCTCCACTATACAGACAGCGGTACCAGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000493676.1
ENST00000651461.1
CDS TCA 72 bp GGAAAGGAGCTAACGAATCCCTTCTTAGGCTCATGTTaGTCCACTAAATTTTTAACGAACTGGTACCGCTGT +
Preference number: 6 (lower is better)
Translates to: GKELTNPFLGSC*STKFLTNWYRC
Trigger: ACAGCGGTACCAGTTCGTTAAAAATTTAGTGGATCAACATGAGCCTAAGAAGGGATTCGTTAGCTCCTTTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000493676.1
CDS CCA 72 bp GAATTCAGAGTTTGGTGTGCTGATGACAATCATGGATaGAGACAGGTACCCAAATACCACTTCAGGAAATCT +
Preference number: 6 (lower is better)
Translates to: EFRVWCADDNHG*RQVPKYHFRKS
Trigger: AGATTTCCTGAAGTGGTATTTGGGTACCTGTCTCCATCCATGATTGTCATCAGCACACCAAACTCTGAATTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000483729.1
ENST00000493676.1
ENST00000651461.1
CDS CAA 90 bp ATGACTGATCTCATCATCTCTTCATTAGCACATAAGCGGTTCAACTaGGGATACGCAAGGAGTCTCTGCAGAGGTACGAAAAATTTATCT +
Preference number: 6 (lower is better)
Translates to: MTDLIISSLAHKRFN*GYARSLCRGTKNLS
Trigger: AGATAAATTTTTCGTACCTCTGCAGAGACTCCTTGCGTATCCCAAGTTGAACCGCTTATGTGCTAATGAAGAGATGATGAGATCAGTCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000651461.1
CDS GCA 72 bp ACCTCATTAACCAACACAAGTTTAAAGAACCTTTCCTaGTGTAAGCTTGGGTATGAGGTGGTAAAAACAGCT +
Preference number: 6 (lower is better)
Translates to: TSLTNTSLKNLS*CKLGYEVVKTA
Trigger: AGCTGTTTTTACCACCTCATACCCAAGCTTACAGCAGGAAAGGTTCTTTAAACTTGTGTTGGTTAATGAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000493676.1
ENST00000651461.1
CDS GCA 72 bp ACCTCATTAACCAACACAAGTTTAAAGAACCTTTCCTaGTGTAAGCTTGGGTATGAGGTGGTAAAAACCTGT +
Preference number: 6 (lower is better)
Translates to: TSLTNTSLKNLS*CKLGYEVVKTC
Trigger: ACAGGTTTTTACCACCTCATACCCAAGCTTACAGCAGGAAAGGTTCTTTAAACTTGTGTTGGTTAATGAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000370031.5
CDS CCA 72 bp ATGGAGACAGGTACCCAAATACCACTTCAGGAAATCTaGCCAGATCACCTGAATCCAAATGTTCTATTAATT +
Preference number: 6 (lower is better)
Translates to: METGTQIPLQEI*PDHLNPNVLLI
Trigger: AATTAATAGAACATTTGGATTCAGGTGATCTGGCCAGATTTCCTGAAGTGGTATTTGGGTACCTGTCTCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000370031.5
ENST00000370032.9
ENST00000402983.5
ENST00000420055.1
ENST00000493676.1
ENST00000651461.1