RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HEMK1 (Homo sapiens)

Ensembl gene IDs: ENSG00000114735

Ensembl transcript IDs: ENST00000232854.9, ENST00000424388.1, ENST00000434410.5, ENST00000443894.1, ENST00000448997.5, ENST00000455834.5, ENST00000482974.1

Found 2084 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CCTGCCCCACACCTAGCGCTCTGCCTGGCCCCTTTGCTGTGGGCGTaGAAATCTGGCACCCGGGCCGACAGGGAGAGAGCTCAGTCTGCG +
Preference number: 1 (lower is better)
Translates to: PAPHLALCLAPLLWA*KSGTRADRERAQSA
Trigger: CGCAGACTGAGCTCTCTCCCTGTCGGCCCGGGTGCCAGATTTTCACGCCCACAGCAAAGGGGCCAGGCAGAGCGCTAGGTGTGGGGCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp GGCTGGGGGCTGGCTGAAGCCAAGAGCTCCAGGAAACCTGGCGCCTaGTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTG +
Preference number: 1 (lower is better)
Translates to: GWGLAEAKSSRKPGA*SYCRQGQPVLLVWL
Trigger: CAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGCAGGCGCCAGGTTTCCTGGAGCTCTTGGCTTCAGCCAGCCCCCAGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 90 bp CAGCTCCAGGGCCCACCCCACTGTGACTGGCAGAGTCTGAAGGGCTaGGCTGGCCTGGGTGTGGCCCCAGCTACGAAGATCCTCCATCCA +
Preference number: 1 (lower is better)
Translates to: QLQGPPHCDWQSLKG*AGLGVAPATKILHP
Trigger: TGGATGGAGGATCTTCGTAGCTGGGGCCACACCCAGGCCAGCCCAGCCCTTCAGACTCTGCCAGTCACAGTGGGGTGGGCCCTGGAGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp TCTGGTCAGGCTGGCGGCACTGACAAGGCATCCACAGGGCAGCCATaGTATGGCCCAGACCTCCGGATATGCAGGAACCGGGGCCTCCCA +
Preference number: 1 (lower is better)
Translates to: SGQAGGTDKASTGQP*YGPDLRICRNRGLP
Trigger: TGGGAGGCCCCGGTTCCTGCATATCCGGAGGTCTGGGCCATAGCATGGCTGCCCTGTGGATGCCTTGTCAGTGCCGCCAGCCTGACCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR CCA 90 bp ACACCTAGCGCTCTGCCTGGCCCCTTTGCTGTGGGCGTGAAAATCTaGCACCCGGGCCGACAGGGAGAGAGCTCAGTCTGCGTCTGCTGC +
Preference number: 1 (lower is better)
Translates to: TPSALPGPFAVGVKI*HPGRQGESSVCVCC
Trigger: GCAGCAGACGCAGACTGAGCTCTCTCCCTGTCGGCCCGGGTGCCAGATTTTCACGCCCACAGCAAAGGGGCCAGGCAGAGCGCTAGGTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp GGCAGAAAGTTGTGCCCGAGGCCGGCTCCTGCTTGTGGCCCCAGCTaGCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTGGTGC +
Preference number: 1 (lower is better)
Translates to: GRKLCPRPAPACGPS*PDSVTLQHCTLFWC
Trigger: GCACCAGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAGCAGGAGCCGGCCTCGGGCACAACTTTCTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 90 bp CTGGCTGAAGCCAAGAGCTCCAGGAAACCTGGCGCCTGCTCCTACTaGCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGG +
Preference number: 1 (lower is better)
Translates to: LAEAKSSRKPGACSY*RQGQPVLLVWLLRR
Trigger: CCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGCAGGCGCCAGGTTTCCTGGAGCTCTTGGCTTCAGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 90 bp GGCCCTGGGCTGCATTTGGCCTCGGCAGCCTGCTCACGCCTCTCCTaGCTGGGATGTCAGAGGACTAGGTTCAAACTCCAGCATGGCCAG +
Preference number: 1 (lower is better)
Translates to: GPGLHLASAACSRLS*LGCQRTRFKLQHGQ
Trigger: CTGGCCATGCTGGAGTTTGAACCTAGTCCTCTGACATCCCAGTCAGGAGAGGCGTGAGCAGGCTGCCGAGGCCAAATGCAGCCCAGGGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 90 bp CAGGTGCAGTGGCTCACGGGACCCGGTGCTCAAGGCCCACGCCCATaGACATACACGTACGTGTGGGTGCCTGTGCAAGGGTGTGTGAGT +
Preference number: 1 (lower is better)
Translates to: QVQWLTGPGAQGPRP*TYTYVWVPVQGCVS
Trigger: ACTCACACACCCTTGCACAGGCACCCACACGTACGTGTATGTTCATGGGCGTGGGCCTTGAGCACCGGGTCCCGTGAGCCACTGCACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 90 bp AGCCTGGAGCTCCCCCATCCAAGGGAGGCCCTGCGTGGACACCTATaGTTATGGACATGGACCCAGTTGGCCAGGTGCAGTGGCTCACGG +
Preference number: 1 (lower is better)
Translates to: SLELPHPREALRGHL*LWTWTQLARCSGSR
Trigger: CCGTGAGCCACTGCACCTGGCCAACTGGGTCCATGTCCATAATCATAGGTGTCCACGCAGGGCCTCCCTTGGATGGGGGAGCTCCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp TCCAACATCTGGGCTCAACGTCCAGGGCCCAATCAAGCCAGTGGCTaGAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGGCTTGGACCTT +
Preference number: 1 (lower is better)
Translates to: SNIWAQRPGPNQASG*RLEAPPASPLGLDL
Trigger: AAGGTCCAAGCCAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCCCTGGACGTTGAGCCCAGATGTTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 90 bp GCAGGCCTCCTGGTGGCCATGAGTCTGCACAGACCAGAGCTGGGGTaGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCTCC +
Preference number: 1 (lower is better)
Translates to: AGLLVAMSLHRPELG*RPQPCAQYLSFSLS
Trigger: GGAGAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGGTCTGTGCAGACTCATGGCCACCAGGAGGCCTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 90 bp GGCGCCTGCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTaGCTGTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGC +
Preference number: 1 (lower is better)
Translates to: GACSYCRQGQPVLLV*LLRRDQVHLSLRSG
Trigger: GCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGCAGGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 90 bp GTCATGAGGAGGAGATCAGGTCACTGTCCTAGCCAGGACTCTGGCTaGGGGCTGGCTGAAGCCAAGAGCTCCAGGAAACCTGGCGCCTGC +
Preference number: 1 (lower is better)
Translates to: VMRRRSGHCPSQDSG*GLAEAKSSRKPGAC
Trigger: GCAGGCGCCAGGTTTCCTGGAGCTCTTGGCTTCAGCCAGCCCCCAGCCAGAGTCCTGGCTAGGACAGTGACCTGATCTCCTCCTCATGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 90 bp ACCTTGTTGGGCCTTCGGAGGAGAAGTAGGGTTGGGGGCAGGTGGTaGCTCTGGCAGAGGCTCTGTTTCCTCTTCCAGCTCCAGGGCCCA +
Preference number: 1 (lower is better)
Translates to: TLLGLRRRSRVGGRW*LWQRLCFLFQLQGP
Trigger: TGGGCCCTGGAGCTGGAAGAGGAAACAGAGCCTCTGCCAGAGTCACCACCTGCCCCCAACCCTACTTCTCCTCCGAAGGCCCAACAAGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp GCAGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTaGCAGGCCCTGGGAAGTGCCAGGGTGGCAGGGGGCAGTCTAGTG +
Preference number: 1 (lower is better)
Translates to: AEDAAYWTILPIRPY*QALGSARVAGGSLV
Trigger: CACTAGACTGCCCCCTGCCACCCTGGCACTTCCCAGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 90 bp CAGCTCTCCCAGCTGCAGCAGAGGATGCTGCCTATTGGACCATACTaGCCATCAGACCATACTGCCAGGCCCTGGGAAGTGCCAGGGTGG +
Preference number: 1 (lower is better)
Translates to: QLSQLQQRMLPIGPY*PSDHTARPWEVPGW
Trigger: CCACCCTGGCACTTCCCAGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCTGCTGCAGCTGGGAGAGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 90 bp GAGGCTGCACGGGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTaGACAGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTG +
Preference number: 1 (lower is better)
Translates to: EAARAVGTSLKTSGA*TAWTPSAPCPPPIL
Trigger: CAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCCCGTGCAGCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 90 bp GTCCCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTaGCCTCCCAGTAGCTCTCCATGTGGCTCCTGGGTTAGGACTGGC +
Preference number: 1 (lower is better)
Translates to: VPQLLSSETQHEAHV*PPSSSPCGSWVRTG
Trigger: GCCAGTCCTAACCCAGGAGCCACATGGAGAGCTACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp CTGGGCTGCATTTGGCCTCGGCAGCCTGCTCACGCCTCTCCTGACTaGGATGTCAGAGGACTAGGTTCAAACTCCAGCATGGCCAGCTGC +
Preference number: 1 (lower is better)
Translates to: LGCIWPRQPAHASPD*DVRGLGSNSSMASC
Trigger: GCAGCTGGCCATGCTGGAGTTTGAACCTAGTCCTCTGACATCCCAGTCAGGAGAGGCGTGAGCAGGCTGCCGAGGCCAAATGCAGCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp AGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTaGCAGCCACTTTCGCTGCCCTCTCCTGCCCCACACCTAGCGCTC +
Preference number: 1 (lower is better)
Translates to: SPRHPYPEYIRVWVQ*QPLSLPSPAPHLAL
Trigger: GAGCGCTAGGTGTGGGGCAGGAGAGGGCAGCGAAAGTGGCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp GGCACCACCAAGGGCCTGGGTAAGTCCCTAGCCCATGTCTACTCATaGAGTACTTGGGGCAACCACACTGGAGCCTGGTGGGGCTCCCAA +
Preference number: 1 (lower is better)
Translates to: GTTKGLGKSLAHVYS*STWGNHTGAWWGSQ
Trigger: TTGGGAGCCCCACCAGGCTCCAGTGTGGTTGCCCCAAGTACTCCATGAGTAGACATGGGCTAGGGACTTACCCAGGCCCTTGGTGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 90 bp GGCTGTTGGCAGGAAAGGACTCGTCCCAGATGCTGTGTCCTCGCCTaGCCTTGTATTCTGCCCCACCTAGTGGCCCTAAGGGAGGCTGAG +
Preference number: 1 (lower is better)
Translates to: GCWQERTRPRCCVLA*PCILPHLVALREAE
Trigger: CTCAGCCTCCCTTAGGGCCACTAGGTGGGGCAGAATACAAGGTCAGGCGAGGACACAGCATCTGGGACGAGTCCTTTCCTGCCAACAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 90 bp TCCCTGCGCACAGCCACAAGATTAAGGTACAGGTCAGGCCGGCTCTaGAGCCAGCTGCTGACAAGCTCCGGGTGCCTTGGGTCCACTTCT +
Preference number: 1 (lower is better)
Translates to: SLRTATRLRYRSGRL*SQLLTSSGCLGSTS
Trigger: AGAAGTGGACCCAAGGCACCCGGAGCTTGTCAGCAGCTGGCTTCAGAGCCGGCCTGACCTGTACCTTAATCTTGTGGCTGTGCGCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR GCA 90 bp CCTGCTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTaGACTCTCTTCTGGTGCAACATCCACAAGCTCGCCAAGGCCCTT +
Preference number: 1 (lower is better)
Translates to: PACGPSCPDSVTLQH*TLFWCNIHKLAKAL
Trigger: AAGGGCCTTGGCGAGCTTGTGGATGTTGCACCAGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 90 bp CTGAGGCCCTGGCCCTATACCTCAGGAGATGCACCCAGGAGCAGCTaGAGGTCTTCTAGAAAGCCCTCTAGGGACAGCCCTGGAAACCCT +
Preference number: 1 (lower is better)
Translates to: LRPWPYTSGDAPRSS*RSSRKPSRDSPGNP
Trigger: AGGGTTTCCAGGGCTGTCCCTAGAGGGCTTTCTAGAAGACCTGCAGCTGCTCCTGGGTGCATCTCCTGAGGTATAGGGCCAGGGCCTCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp ATGAGGGGCCTGTCAGGAGGAGTCTATGTGCAAGTCCATGAGTTCTaGAAGGCCAGGGCCCCACCTGAACCATCCAACCTCCTGGGCCTG +
Preference number: 1 (lower is better)
Translates to: MRGLSGGVYVQVHEF*KARAPPEPSNLLGL
Trigger: CAGGCCCAGGAGGTTGGATGGTTCAGGTGGGGCCCTGGCCTTGCAGAACTCATGGACTTGCACATAGACTCCTCCTGACAGGCCCCTCAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp GGCTTGGTTTCCAGAGCCTGGAGCTCCCCCATCCAAGGGAGGCCCTaGGTGGACACCTATGATTATGGACATGGACCCAGTTGGCCAGGT +
Preference number: 1 (lower is better)
Translates to: GLVSRAWSSPIQGRP*VDTYDYGHGPSWPG
Trigger: ACCTGGCCAACTGGGTCCATGTCCATAATCATAGGTGTCCACGCAGGGCCTCCCTTGGATGGGGGAGCTCCAGGCTCTGGAAACCAAGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp CTGCCTTGTATCCCTGCCTGCCTTATGTTGGTCCCATGCATCAGATaGACGCCTGAGGGCACTGGGTCCTTCCTCCCTGTGTCTGCCCTC +
Preference number: 1 (lower is better)
Translates to: LPCIPACLMLVPCIR*TPEGTGSFLPVSAL
Trigger: GAGGGCAGACACAGGGAGGAAGGACCCAGTGCCCTCAGGCGTCCATCTGATGCATGGGACCAACATAAGGCAGGCAGGGATACAAGGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 90 bp CGGGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTaGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGT +
Preference number: 1 (lower is better)
Translates to: RAVGTSLKTSGACTA*TPSAPCPPPILPAS
Trigger: ACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 90 bp CCATGTGGCTCCTGGGTTAGGACTGGCTTCAGGAGCCCCAAGCCTTaGCTGGGTGGGATGGTGTCTCCAGAGTCCTTTAGTACCCCTGGA +
Preference number: 1 (lower is better)
Translates to: PCGSWVRTGFRSPKP*LGGMVSPESFSTPG
Trigger: TCCAGGGGTACTAAAGGACTCTGGAGACACCATCCCACCCAGCCAAGGCTTGGGGCTCCTGAAGCCAGTCCTAACCCAGGAGCCACATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp GTGTCTGTCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTaGGTTCAGTGGCAGCCACTTTCGCTGCCCTCTCCTGCCCCACAC +
Preference number: 1 (lower is better)
Translates to: VSVSPRHPYPEYIRV*VQWQPLSLPSPAPH
Trigger: GTGTGGGGCAGGAGAGGGCAGCGAAAGTGGCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGACAGACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp TGGTTTCCAGAGCCTGGAGCTCCCCCATCCAAGGGAGGCCCTGCGTaGACACCTATGATTATGGACATGGACCCAGTTGGCCAGGTGCAG +
Preference number: 1 (lower is better)
Translates to: WFPEPGAPPSKGGPA*TPMIMDMDPVGQVQ
Trigger: CTGCACCTGGCCAACTGGGTCCATGTCCATAATCATAGGTGTCCACGCAGGGCCTCCCTTGGATGGGGGAGCTCCAGGCTCTGGAAACCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp CACACACACGTGCATGCATGCAACCCTGGCTTGGTTTCCAGAGCCTaGAGCTCCCCCATCCAAGGGAGGCCCTGCGTGGACACCTATGAT +
Preference number: 1 (lower is better)
Translates to: HTHVHACNPGLVSRA*SSPIQGRPCVDTYD
Trigger: ATCATAGGTGTCCACGCAGGGCCTCCCTTGGATGGGGGAGCTCCAGGCTCTGGAAACCAAGCCAGGGTTGCATGCATGCACGTGTGTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp GGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCTGAGCCCCTaGAAGTCCCACTCTCCAAGGATGTACTGCACCGGCATCCTCTGC +
Preference number: 1 (lower is better)
Translates to: GRGINTGGTILRLSP*KSHSPRMYCTGILC
Trigger: GCAGAGGATGCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAGGGGCTCAGCCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
3UTR TCA 90 bp AGTGAGCTGCTCTATGCCAGGACCCATGGTATCCAAGGCCAGGAGTaGGGACTCACGTGCCTTCCTCCACACTGCACCCCCACACCACTA +
Preference number: 1 (lower is better)
Translates to: SELLYARTHGIQGQE*GLTCLPPHCTPTPL
Trigger: TAGTGGTGTGGGGGTGCAGTGTGGAGGAAGGCACGTGAGTCCTCACTCCTGGCCTTGGATACCATGGGTCCTGGCATAGAGCAGCTCACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 90 bp GACACAGCCCTGGAACTCAGCTCTCCCAGCTGCAGCAGAGGATGCTaGCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCT +
Preference number: 1 (lower is better)
Translates to: DTALELSSPSCSRGC*LLDHTAHQTILPGP
Trigger: AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCTGCTGCAGCTGGGAGAGCTGAGTTCCAGGGCTGTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 90 bp CAGGACACAGCCCTGGAACTCAGCTCTCCCAGCTGCAGCAGAGGATaGTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGC +
Preference number: 1 (lower is better)
Translates to: QDTALELSSPSCSRG*CLLDHTAHQTILPG
Trigger: GCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCTGCTGCAGCTGGGAGAGCTGAGTTCCAGGGCTGTGTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 90 bp GAAGAGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTaGAGGACACAGCCCTGGAACTCAGCTCTCCCAGCTGCAGCAGAG +
Preference number: 1 (lower is better)
Translates to: EEPASHRERSCPRSH*RTQPWNSALPAAAE
Trigger: CTCTGCTGCAGCTGGGAGAGCTGAGTTCCAGGGCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCTCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 90 bp AGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTGGTaGAACATCCACAAGCTCGCCAAGGCCCTTCCTCAGGAATGGGCC +
Preference number: 1 (lower is better)
Translates to: SCPDSVTLQHCTLFW*NIHKLAKALPQEWA
Trigger: GGCCCATTCCTGAGGAAGGGCCTTGGCGAGCTTGTGGATGTTGCACCAGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 90 bp GGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGAATGGCTaGCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCTTCCCATCCC +
Preference number: 1 (lower is better)
Translates to: GALESSKWPLLNLNG*LGRAEGQVLMASHP
Trigger: GGGATGGGAAGCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 90 bp AGCCTCTCTGGCCCCTCCTCAAGACCAAGTGGAAGGGAAGAGCTCTaGAAACTGGCAGAGAACTTGGTCTGGGGCCATGTAGTGGAGGGG +
Preference number: 1 (lower is better)
Translates to: SLSGPSSRPSGREEL*KLAENLVWGHVVEG
Trigger: CCCCTCCACTACATGGCCCCAGACCAAGTTCTCTGCCAGTTTGCAGAGCTCTTCCCTTCCACTTGGTCTTGAGGAGGGGCCAGAGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp CCCTGGAACTCAGCTCTCCCAGCTGCAGCAGAGGATGCTGCCTATTaGACCATACTGCCCATCAGACCATACTGCCAGGCCCTGGGAAGT +
Preference number: 1 (lower is better)
Translates to: PWNSALPAAAEDAAY*TILPIRPYCQALGS
Trigger: ACTTCCCAGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCTGCTGCAGCTGGGAGAGCTGAGTTCCAGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 90 bp CCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTaGTGCAACATCCACAAGCTCGCCAAGGCCCTTCCTCAGGAATGG +
Preference number: 1 (lower is better)
Translates to: PSCPDSVTLQHCTLF*CNIHKLAKALPQEW
Trigger: CCATTCCTGAGGAAGGGCCTTGGCGAGCTTGTGGATGTTGCACCAGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 90 bp GGTGTGGCTGTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTaGCCATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGC +
Preference number: 1 (lower is better)
Translates to: GVAVAQGSGALESSK*PLLNLNGCLGRAEG
Trigger: GCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAACAGCCACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 90 bp TGGCCCCATTTCCCCCAGGTCCCAATCAGATCCCTGGGCCCACTGTaGTCCTGGCCATCTCACATCCAAACCCTCAGCAATGGTTGTGAG +
Preference number: 1 (lower is better)
Translates to: WPHFPQVPIRSLGPL*SWPSHIQTLSNGCE
Trigger: CTCACAACCATTGCTGAGGGTTTGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGGGGGAAATGGGGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp AAGGGCCTGGGTAAGTCCCTAGCCCATGTCTACTCATGGAGTACTTaGGGCAACCACACTGGAGCCTGGTGGGGCTCCCAAGGACCTTTC +
Preference number: 1 (lower is better)
Translates to: KGLGKSLAHVYSWST*GNHTGAWWGSQGPF
Trigger: GAAAGGTCCTTGGGAGCCCCACCAGGCTCCAGTGTGGTTGCCCCAAGTACTCCATGAGTAGACATGGGCTAGGGACTTACCCAGGCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 90 bp TACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGAGTaGGCTGCTCTATGCCAGGACCCATGGTATCCAAGGCCAGGAGTG +
Preference number: 1 (lower is better)
Translates to: YACTQGSGGLINPWE*AALCQDPWYPRPGV
Trigger: CACTCCTGGCCTTGGATACCATGGGTCCTGGCATAGAGCAGCTCACTCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 90 bp CAAAGACCTCCAGACCCTCCCCTCCAGAAAGCAGGCAGTCATCCTTaGGCCAAAACGCAGATGAGCTTCCTGTGCTCGAGCCAGGCTTGG +
Preference number: 1 (lower is better)
Translates to: QRPPDPPLQKAGSHP*AKTQMSFLCSSQAW
Trigger: CCAAGCCTGGCTCGAGCACAGGAAGCTCATCTGCGTTTTGGCTCAAGGATGACTGCCTGCTTTCTGGAGGGGAGGGTCTGGAGGTCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 90 bp GGGCCGACAGGGAGAGAGCTCAGTCTGCGTCTGCTGCTTTCTGTTTaGTTCATCACTTTCCCCTTCACCCTGGAGCCCACGTTGGCTGTG +
Preference number: 1 (lower is better)
Translates to: GPTGRELSLRLLLSV*FITFPFTLEPTLAV
Trigger: CACAGCCAACGTGGGCTCCAGGGTGAAGGGGAAAGTGATGAATCAAACAGAAAGCAGCAGACGCAGACTGAGCTCTCTCCCTGTCGGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp CTTTCCAGACTGCCTTGTATCCCTGCCTGCCTTATGTTGGTCCCATaGATCAGATGGACGCCTGAGGGCACTGGGTCCTTCCTCCCTGTG +
Preference number: 1 (lower is better)
Translates to: LSRLPCIPACLMLVP*IRWTPEGTGSFLPV
Trigger: CACAGGGAGGAAGGACCCAGTGCCCTCAGGCGTCCATCTGATGCATGGGACCAACATAAGGCAGGCAGGGATACAAGGCAGTCTGGAAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 90 bp ACTCTCCCAGAGTACATCAAACAGGGACTCCTACACTCCTGTCTATaGTCTGGGCTCTGGCTGAAGGAGGCTGCACGGGCAGTGGGCACA +
Preference number: 1 (lower is better)
Translates to: TLPEYIKQGLLHSCL*SGLWLKEAARAVGT
Trigger: TGTGCCCACTGCCCGTGCAGCCTCCTTCAGCCAGAGCCCAGAGCATAGACAGGAGTGTAGGAGTCCCTGTTTGATGTACTCTGGGAGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 90 bp ATCTGGCACCCGGGCCGACAGGGAGAGAGCTCAGTCTGCGTCTGCTaGTTTCTGTTTGATTCATCACTTTCCCCTTCACCCTGGAGCCCA +
Preference number: 1 (lower is better)
Translates to: IWHPGRQGESSVCVC*FLFDSSLSPSPWSP
Trigger: TGGGCTCCAGGGTGAAGGGGAAAGTGATGAATCAAACAGAAAGCAGCAGACGCAGACTGAGCTCTCTCCCTGTCGGCCCGGGTGCCAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp AGGAGACCCATCCCATTCATACCCAGAGTCTTTCAGGAGCCGGGGTaGCAAGGCCAGAATGTGGGTAATGATGTCCATGCCCTCCTCCCC +
Preference number: 1 (lower is better)
Translates to: RRPIPFIPRVFQEPG*QGQNVGNDVHALLP
Trigger: GGGGAGGAGGGCATGGACATCATTACCCACATTCTGGCCTTGGCACCCCGGCTCCTGAAAGACTCTGGGTATGAATGGGATGGGTCTCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR CCA 90 bp AGCCAGGCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTaGAGGACTAATCAATCCCTGGGAGTGAGCTGCTCTATGCCAGGA +
Preference number: 1 (lower is better)
Translates to: SQAWPGNCVRMHPGQ*RTNQSLGVSCSMPG
Trigger: TCCTGGCATAGAGCAGCTCACTCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGCCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 90 bp CATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTaGCTCCAACATCTGGGCTCAACGTCCAGGGCCCAATCAAGCCAG +
Preference number: 1 (lower is better)
Translates to: HPREGQILGLKSRLV*LQHLGSTSRAQSSQ
Trigger: CTGGCTTGATTGGGCCCTGGACGTTGAGCCCAGATGTTGGAGCCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 90 bp CATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCTTGACATATGCTaGTGGTGGTGGGGAGGCTGTTCGAGTCTCTGGCTTTGGCCTCAG +
Preference number: 1 (lower is better)
Translates to: HVLLPFCLQVLLDIC*WWWGGCSSLWLWPQ
Trigger: CTGAGGCCAAAGCCAGAGACTCGAACAGCCTCCCCACCACCACCAGCATATGTCAAGGAGCACTTGCAGGCAGAATGGGAGGAGGACATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 90 bp CCCAGAGTACATCAAACAGGGACTCCTACACTCCTGTCTATGCTCTaGGCTCTGGCTGAAGGAGGCTGCACGGGCAGTGGGCACATCTCT +
Preference number: 1 (lower is better)
Translates to: PRVHQTGTPTLLSML*ALAEGGCTGSGHIS
Trigger: AGAGATGTGCCCACTGCCCGTGCAGCCTCCTTCAGCCAGAGCCCAGAGCATAGACAGGAGTGTAGGAGTCCCTGTTTGATGTACTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 90 bp GTGAAAGCTGGGAGGAGCCTGTGGTTAGTTCCCAGGCGGGTTTGCTaGGAGAATCACCAGCCTCCATTTCCCAGAGGTCAACGGAGTGTG +
Preference number: 1 (lower is better)
Translates to: VKAGRSLWLVPRRVC*ENHQPPFPRGQRSV
Trigger: CACACTCCGTTGACCTCTGGGAAATGGAGGCTGGTGATTCTCCCAGCAAACCCGCCTGGGAACTAACCACAGGCTCCTCCCAGCTTTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp CCAAGTGGAAGGGAAGAGCTCTGCAAACTGGCAGAGAACTTGGTCTaGGGCCATGTAGTGGAGGGGCAACACCCCAAAGACCTGAGGCTC +
Preference number: 1 (lower is better)
Translates to: PSGREELCKLAENLV*GHVVEGQHPKDLRL
Trigger: GAGCCTCAGGTCTTTGGGGTGTTGCCCCTCCACTACATGGCCCCAGACCAAGTTCTCTGCCAGTTTGCAGAGCTCTTCCCTTCCACTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp GCCTTGGGTCCACTTCTAAGAAGATACTACTACATGGGGGAGAAATaGGTGGGCTCAGCAGGACAGGTCTGGCGCCTGCCCTTCTGGGCT +
Preference number: 1 (lower is better)
Translates to: ALGPLLRRYYYMGEK*VGSAGQVWRLPFWA
Trigger: AGCCCAGAAGGGCAGGCGCCAGACCTGTCCTGCTGAGCCCACCCATTTCTCCCCCATGTAGTAGTATCTTCTTAGAAGTGGACCCAAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR TCA 90 bp CTCCCCTCCAGAAAGCAGGCAGTCATCCTTGAGCCAAAACGCAGATaGGCTTCCTGTGCTCGAGCCAGGCTTGGCCAGGGAATTGTGTAC +
Preference number: 1 (lower is better)
Translates to: LPSRKQAVILEPKRR*ASCARARLGQGIVY
Trigger: GTACACAATTCCCTGGCCAAGCCTGGCTCGAGCACAGGAAGCTCATCTGCGTTTTGGCTCAAGGATGACTGCCTGCTTTCTGGAGGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 90 bp AGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTaGATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCTT +
Preference number: 1 (lower is better)
Translates to: RDQVHLSLRSGHCST*MAAWVGQKARSSWL
Trigger: AAGCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 90 bp AGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGATCAGGTGCACTTaGGTCTTCGAAGTGGCCATTGCTCAACTTGAATGGCTGCCTGGG +
Preference number: 1 (lower is better)
Translates to: SLFSWCGCCAGIRCT*VFEVAIAQLEWLPG
Trigger: CCCAGGCAGCCATTCAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAACAGCCACACCAGGAGAACAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 90 bp GCAGGAATGATGGGCCTGCAGGTAAGACAGGTGAGACAGGCCAGATaGCAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGTGGTCTC +
Preference number: 1 (lower is better)
Translates to: AGMMGLQVRQVRQAR*QPQLPLPQLWEGGL
Trigger: GAGACCACCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACCTGTCTTACCTGCAGGCCCATCATTCCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 90 bp CATGGGCTCTGCGCTCCCATGACTTGGAGGCAGTGGTTGGGCCTCTaGGGCAGAGTAACACCACACACACACAAACACACACACACACAC +
Preference number: 1 (lower is better)
Translates to: HGLCAPMTWRQWLGL*GRVTPHTHKHTHTH
Trigger: GTGTGTGTGTGTGTGTTTGTGTGTGTGTGGTGTTACTCTGCCTCAGAGGCCCAACCACTGCCTCCAAGTCATGGGAGCGCAGAGCCCATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp CATTTCACAGATGCAGTACCTGCAACCCAGAGAGTACAGGGCCCCTaGTCATCCTCACACACCCAAGGGGTCCTGGGCCAGTCACATAAC +
Preference number: 1 (lower is better)
Translates to: HFTDAVPATQRVQGP*SSSHTQGVLGQSHN
Trigger: GTTATGTGACTGGCCCAGGACCCCTTGGGTGTGTGAGGATGAGCAGGGGCCCTGTACTCTCTGGGTTGCAGGTACTGCATCTGTGAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp GCTCAAAGTCAGGGGCTGCTGTGCTCATTTCACAGATGCAGTACCTaGAACCCAGAGAGTACAGGGCCCCTGCTCATCCTCACACACCCA +
Preference number: 1 (lower is better)
Translates to: AQSQGLLCSFHRCST*NPESTGPLLILTHP
Trigger: TGGGTGTGTGAGGATGAGCAGGGGCCCTGTACTCTCTGGGTTGCAGGTACTGCATCTGTGAAATGAGCACAGCAGCCCCTGACTTTGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp GGCCCATTAGCTCAAAGTCAGGGGCTGCTGTGCTCATTTCACAGATaGAGTACCTGCAACCCAGAGAGTACAGGGCCCCTGCTCATCCTC +
Preference number: 1 (lower is better)
Translates to: GPLAQSQGLLCSFHR*STCNPESTGPLLIL
Trigger: GAGGATGAGCAGGGGCCCTGTACTCTCTGGGTTGCAGGTACTGCATCTGTGAAATGAGCACAGCAGCCCCTGACTTTGAGCTAATGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp AAATGGACACCAATGGCAGCCTCATCCTCCCTTCCTGTCCAGCTATaGAACCTGACCTGCAACTGCACCCTGCTGAGCCTTGGTGTCCTC +
Preference number: 1 (lower is better)
Translates to: KWTPMAASSSLPVQL*NLTCNCTLLSLGVL
Trigger: GAGGACACCAAGGCTCAGCAGGGTGCAGTTGCAGGTCAGGTTGCATAGCTGGACAGGAAGGGAGGATGAGGCTGCCATTGGTGTCCATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp TGCAGGTCTTCTAGAAAGCCCTCTAGGGACAGCCCTGGAAACCCTTaGTCCTGCTCCAAGGGTCCACAAGCCCAGGTAACTTCTGCGCTA +
Preference number: 1 (lower is better)
Translates to: CRSSRKPSRDSPGNP*SCSKGPQAQVTSAL
Trigger: TAGCGCAGAAGTTACCTGGGCTTGTGGACCCTTGGAGCAGGAGCAAGGGTTTCCAGGGCTGTCCCTAGAGGGCTTTCTAGAAGACCTGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp CCGCATGTCTGCAGAACTCCAGGCTTTTGTCCAGACTGTCCCTACTaGCTGGTATATTCCTGTCCTATCCGCCCCTCCTCAAGCCTGGTG +
Preference number: 1 (lower is better)
Translates to: PHVCRTPGFCPDCPY*LVYSCPIRPSSSLV
Trigger: CACCAGGCTTGAGGAGGGGCGGATAGGACAGGAATATACCAGGCAGTAGGGACAGTCTGGACAAAAGCCTGGAGTTCTGCAGACATGCGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp ACCTCTCGGCACCACCTCACCCCTACATATCCCTACCCGCATGTCTaGAGAACTCCAGGCTTTTGTCCAGACTGTCCCTACTGCCTGGTA +
Preference number: 1 (lower is better)
Translates to: TSRHHLTPTYPYPHV*RTPGFCPDCPYCLV
Trigger: TACCAGGCAGTAGGGACAGTCTGGACAAAAGCCTGGAGTTCTGCAGACATGCGGGTAGGGATATGTAGGGGTGAGGTGGTGCCGAGAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp AGGTGCACAGTCAGGGTCCTAATGTCCTTCCCTAAACTAGCCCTCTaGACTAGGGGATGGACGCAAGCTGGCTGTCCCAGAGTGTGGAGT +
Preference number: 1 (lower is better)
Translates to: RCTVRVLMSFPKLAL*TRGWTQAGCPRVWS
Trigger: ACTCCACACTCTGGGACAGCCAGCTTGCGTCCATCCCCTAGTGCAGAGGGCTAGTTTAGGGAAGGACATTAGGACCCTGACTGTGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp AGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTaGGCTCTGGAAAGTGCCATCCACCTCCCCTCTGGTCAGGCTGGC +
Preference number: 1 (lower is better)
Translates to: RAWGNHRTLGNAIRT*ALESAIHLPSGQAG
Trigger: GCCAGCCTGACCAGAGGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
3UTR CCA 90 bp CTTCCCTTCTTTCCAGACTGCCTTGTATCCCTGCCTGCCTTATGTTaGTCCCATGCATCAGATGGACGCCTGAGGGCACTGGGTCCTTCC +
Preference number: 1 (lower is better)
Translates to: LPFFPDCLVSLPALC*SHASDGRLRALGPS
Trigger: GGAAGGACCCAGTGCCCTCAGGCGTCCATCTGATGCATGGGACCAACATAAGGCAGGCAGGGATACAAGGCAGTCTGGAAAGAAGGGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 90 bp ACAGAAAGGGCAATACTGGTGAGGACCTTAGCAGGCAAAGGTCTGTaGGCATGGGGGACTAAGGAAGTGGGGAGCCTTGCCCTGGTTGTG +
Preference number: 1 (lower is better)
Translates to: TERAILVRTLAGKGL*AWGTKEVGSLALVV
Trigger: CACAACCAGGGCAAGGCTCCCCACTTCCTTAGTCCCCCATGCTCACAGACCTTTGCCTGCTAAGGTCCTCACCAGTATTGCCCTTTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 90 bp AGGCTGCCAGGCTACCAGCCTGCTGGCTCCATCTCTAGACAACAGTaGGGAGTCAAGAGCCCAAGACTGAAACTCCTGCCTTCCCTTCTT +
Preference number: 1 (lower is better)
Translates to: RLPGYQPAGSISRQQ*GVKSPRLKLLPSLL
Trigger: AAGAAGGGAAGGCAGGAGTTTCAGTCTTGGGCTCTTGACTCCTCACTGTTGTCTAGAGATGGAGCCAGCAGGCTGGTAGCCTGGCAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 90 bp GGACTCAGATCTGTCTGCACACCCAGGGCTACAGTTGGCCTAATGTaGCTCTTACCTGCCCATAAACCTGGCCCAGAGGGCTTTATGGGC +
Preference number: 1 (lower is better)
Translates to: GLRSVCTPRATVGLM*LLPAHKPGPEGFMG
Trigger: GCCCATAAAGCCCTCTGGGCCAGGTTTATGGGCAGGTAAGAGTCACATTAGGCCAACTGTAGCCCTGGGTGTGCAGACAGATCTGAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 90 bp GTAGTCCTAGTTTGCTTTGCTTGGTCACGTAGCTCAGCCTCACACTaGCTTCCAGGAACAGCAGAGGGACTTGGACGCCTCTCCAGGCAG +
Preference number: 1 (lower is better)
Translates to: VVLVCFAWSRSSASH*LPGTAEGLGRLSRQ
Trigger: CTGCCTGGAGAGGCGTCCAAGTCCCTCTGCTGTTCCTGGAAGTCAGTGTGAGGCTGAGCTACGTGACCAAGCAAAGCAAACTAGGACTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 90 bp CTCCACTTGGTATCATCTCCCTGGTGCCTGACACAAAGTAGGTCTTaGGAGACTGAGGCCCTGGCCCTATACCTCAGGAGATGCACCCAG +
Preference number: 1 (lower is better)
Translates to: LHLVSSPWCLTQSRS*ETEALALYLRRCTQ
Trigger: CTGGGTGCATCTCCTGAGGTATAGGGCCAGGGCCTCAGTCTCTCAAGACCTACTTTGTGTCAGGCACCAGGGAGATGATACCAAGTGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 90 bp AAGGTCTGGTTCATTTCCCTCCCAGACCTGCCTCACCTTGCTGTGTaGCACTGGGCAAGTCATGGGCCCTCTCTGAGCTTTGGCTCTCTT +
Preference number: 1 (lower is better)
Translates to: KVWFISLPDLPHLAV*HWASHGPSLSFGSL
Trigger: AAGAGAGCCAAAGCTCAGAGAGGGCCCATGACTTGCCCAGTGTCACACAGCAAGGTGAGGCAGGTCTGGGAGGGAAATGAACCAGACCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 90 bp ATTCTCCTGCCCACCCTTAGCCCACCAAATCTTCTCCGGGGCCCCTaGGTCAGGTGCACAGTCAGGGTCCTAATGTCCTTCCCTAAACTA +
Preference number: 1 (lower is better)
Translates to: ILLPTLSPPNLLRGP*VRCTVRVLMSFPKL
Trigger: TAGTTTAGGGAAGGACATTAGGACCCTGACTGTGCACCTGACTCAGGGGCCCCGGAGAAGATTTGGTGGGCTAAGGGTGGGCAGGAGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp CCCTGTGTCTGCCCTCCGAGGAAGGCAAGGAAAAATGCCACAATGTaGCAAGCCAGGCACATCCCATGGGCTCCTCACATGCATCCTATA +
Preference number: 1 (lower is better)
Translates to: PCVCPPRKARKNATM*QARHIPWAPHMHPI
Trigger: TATAGGATGCATGTGAGGAGCCCATGGGATGTGCCTGGCTTGGCACATTGTGGCATTTTTCCTTGCCTTCCTCGGAGGGCAGACACAGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 90 bp TACATGGAGGGGCCAGGCCCATTAGCTCAAAGTCAGGGGCTGCTGTaGTCATTTCACAGATGCAGTACCTGCAACCCAGAGAGTACAGGG +
Preference number: 1 (lower is better)
Translates to: YMEGPGPLAQSQGLL*SFHRCSTCNPESTG
Trigger: CCCTGTACTCTCTGGGTTGCAGGTACTGCATCTGTGAAATGAGCACAGCAGCCCCTGACTTTGAGCTAATGGGCCTGGCCCCTCCATGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp TCTTCTAGAAAGCCCTCTAGGGACAGCCCTGGAAACCCTTGCTCCTaGTCCAAGGGTCCACAAGCCCAGGTAACTTCTGCGCTAAGCTCT +
Preference number: 1 (lower is better)
Translates to: SSRKPSRDSPGNPCS*SKGPQAQVTSALSS
Trigger: AGAGCTTAGCGCAGAAGTTACCTGGGCTTGTGGACCCTTGGAGCAGGAGCAAGGGTTTCCAGGGCTGTCCCTAGAGGGCTTTCTAGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp AAAATCTGGCACCCGGGCCGACAGGGAGAGAGCTCAGTCTGCGTCTaGTGCTTTCTGTTTGATTCATCACTTTCCCCTTCACCCTGGAGC +
Preference number: 1 (lower is better)
Translates to: KIWHPGRQGESSVCV*CFLFDSSLSPSPWS
Trigger: GCTCCAGGGTGAAGGGGAAAGTGATGAATCAAACAGAAAGCAGCAGACGCAGACTGAGCTCTCTCCCTGTCGGCCCGGGTGCCAGATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp TTAGTGAAAGCTGGGAGGAGCCTGTGGTTAGTTCCCAGGCGGGTTTaGTGGGAGAATCACCAGCCTCCATTTCCCAGAGGTCAACGGAGT +
Preference number: 1 (lower is better)
Translates to: LVKAGRSLWLVPRRV*WENHQPPFPRGQRS
Trigger: ACTCCGTTGACCTCTGGGAAATGGAGGCTGGTGATTCTCCCAGCAAACCCGCCTGGGAACTAACCACAGGCTCCTCCCAGCTTTCACTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp GTATCAATCCCAGGTGTGGAAACCTCTTCCTTTGCGTGGCTCCCCTaGGTTGTTTGCAGGAGAGGTCTGGAGGAAAGAGAGTCACCCCAG +
Preference number: 1 (lower is better)
Translates to: VSIPGVETSSFAWLP*VVCRRGLEERESPQ
Trigger: CTGGGGTGACTCTCTTTCCTCCAGACCTCTCCTGCAAACAACGCAGGGGAGCCACGCAAAGGAAGAGGTTTCCACACCTGGGATTGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp CTTGAGGCCCCAGAGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATaGCTCTTCCTCCAGCAATTGCATCACTCTGACCTCTGCTTCCAT +
Preference number: 1 (lower is better)
Translates to: LEAPEEKRLSAFLGS*LFLQQLHHSDLCFH
Trigger: ATGGAAGCAGAGGTCAGAGTGATGCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCTCTGGGGCCTCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 90 bp CAGAGTCCTTTAGTACCCCTGGAAAGGGAGGTCCTAGTCCCAGCTTaGACAGGGACAGGGCTGAGGGCACCAGTTGGCCAATTCAGTTTT +
Preference number: 1 (lower is better)
Translates to: QSPLVPLEREVLVPA*TGTGLRAPVGQFSF
Trigger: AAAACTGAATTGGCCAACTGGTGCCCTCAGCCCTGTCCCTGTCCAAGCTGGGACTAGGACCTCCCTTTCCAGGGGTACTAAAGGACTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp GCCCAGGACCTAGTTATGCTGGCCTCAGCGTCTCTGATAGTCAAATaGACACCAATGGCAGCCTCATCCTCCCTTCCTGTCCAGCTATGC +
Preference number: 1 (lower is better)
Translates to: AQDLVMLASASLIVK*TPMAASSSLPVQLC
Trigger: GCATAGCTGGACAGGAAGGGAGGATGAGGCTGCCATTGGTGTCCATTTGACTATCAGAGACGCTGAGGCCAGCATAACTAGGTCCTGGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp CATTTCCCCCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTaGCCATCTCACATCCAAACCCTCAGCAATGGTTGTGAGTCAGTT +
Preference number: 1 (lower is better)
Translates to: HFPQVPIRSLGPLWS*PSHIQTLSNGCESV
Trigger: AACTGACTCACAACCATTGCTGAGGGTTTGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGGGGGAAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp GCAGATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTaGTCTTCACAACTCTACCTCAAGGGTTGCCTTTGGACTGTGTCC +
Preference number: 1 (lower is better)
Translates to: ADARYCCRQHSGLGE*SSQLYLKGCLWTVS
Trigger: GGACACAGTCCAAAGGCAACCCTTGAGGTAGAGTTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp TTTAGAGCACCTGCCCTGGAGTCCCAGCAGTATCAATCCCAGGTGTaGAAACCTCTTCCTTTGCGTGGCTCCCCTGCGTTGTTTGCAGGA +
Preference number: 1 (lower is better)
Translates to: FRAPALESQQYQSQV*KPLPLRGSPALFAG
Trigger: TCCTGCAAACAACGCAGGGGAGCCACGCAAAGGAAGAGGTTTCCACACCTGGGATTGATACTGCTGGGACTCCAGGGCAGGTGCTCTAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp TCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTaGAGCAAAGACCTCCAGACCCTCCCCTCCAGAAAGCAGGCAGTC +
Preference number: 1 (lower is better)
Translates to: SSLQLNERGCATQEL*SKDLQTLPSRKQAV
Trigger: GACTGCCTGCTTTCTGGAGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 90 bp AAACTCCTGCCTTCCCTTCTTTCCAGACTGCCTTGTATCCCTGCCTaGCTTATGTTGGTCCCATGCATCAGATGGACGCCTGAGGGCACT +
Preference number: 1 (lower is better)
Translates to: KLLPSLLSRLPCIPA*LMLVPCIRWTPEGT
Trigger: AGTGCCCTCAGGCGTCCATCTGATGCATGGGACCAACATAAGGCAGGCAGGGATACAAGGCAGTCTGGAAAGAAGGGAAGGCAGGAGTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 90 bp CAGCCTCCATTTCCCAGAGGTCAACGGAGTGTGGTTCTCAGGGGGTaGCAAGCTCCAAGCATGAAGCCAAAAAGGTCAGGGATGTGGATA +
Preference number: 1 (lower is better)
Translates to: QPPFPRGQRSVVLRG*QAPSMKPKRSGMWI
Trigger: TATCCACATCCCTGACCTTTTTGGCTTCATGCTTGGAGCTTGGCACCCCCTGAGAACCACACTCCGTTGACCTCTGGGAAATGGAGGCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp GCCCATTCCTTGTGCCTGGCACAGTGCCAGCAGATGGTGACTGAATaGATGCCCCATGGCCTAAGGATAAGGATCTATTTGCCTGCCTGT +
Preference number: 1 (lower is better)
Translates to: AHSLCLAQCQQMVTE*MPHGLRIRIYLPAC
Trigger: ACAGGCAGGCAAATAGATCCTTATCCTTAGGCCATGGGGCATGCATTCAGTCACCATCTGCTGGCACTGTGCCAGGCACAAGGAATGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp CCAGGTGTGGAAACCTCTTCCTTTGCGTGGCTCCCCTGCGTTGTTTaGAGGAGAGGTCTGGAGGAAAGAGAGTCACCCCAGAAATACATC +
Preference number: 1 (lower is better)
Translates to: PGVETSSFAWLPCVV*RRGLEERESPQKYI
Trigger: GATGTATTTCTGGGGTGACTCTCTTTCCTCCAGACCTCTCCTGCAAACAACGCAGGGGAGCCACGCAAAGGAAGAGGTTTCCACACCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp GGTCTAGGAGAGTGGTCTTCACAACTCTACCTCAAGGGTTGCCTTTaGACTGTGTCCCCACATGGTCACATTTGCATCTCCAGACGCCCC +
Preference number: 1 (lower is better)
Translates to: GLGEWSSQLYLKGCL*TVSPHGHICISRRP
Trigger: GGGGCGTCTGGAGATGCAAATGTGACCATGTGGGGACACAGTCCAAAGGCAACCCTTGAGGTAGAGTTGTGAAGACCACTCTCCTAGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp TATTGGAAATCCTGGGGTTGGTTAGTGAAAGCTGGGAGGAGCCTGTaGTTAGTTCCCAGGCGGGTTTGCTGGGAGAATCACCAGCCTCCA +
Preference number: 1 (lower is better)
Translates to: YWKSWGWLVKAGRSL*LVPRRVCWENHQPP
Trigger: TGGAGGCTGGTGATTCTCCCAGCAAACCCGCCTGGGAACTAACCACAGGCTCCTCCCAGCTTTCACTAACCAACCCCAGGATTTCCAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp AGCAAAGCACCGGTATTGGAAATCCTGGGGTTGGTTAGTGAAAGCTaGGAGGAGCCTGTGGTTAGTTCCCAGGCGGGTTTGCTGGGAGAA +
Preference number: 1 (lower is better)
Translates to: SKAPVLEILGLVSES*EEPVVSSQAGLLGE
Trigger: TTCTCCCAGCAAACCCGCCTGGGAACTAACCACAGGCTCCTCCCAGCTTTCACTAACCAACCCCAGGATTTCCAATACCGGTGCTTTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 90 bp AGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTaGTGTGCCAACAGATGGATTTATGACCACGTGTGTGCAGCACCT +
Preference number: 1 (lower is better)
Translates to: SLSPFIHTVGQGRDP*CANRWIYDHVCAAP
Trigger: AGGTGCTGCACACACGTGGTCATAAATCCATCTGTTGGCACATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp TGTGTCCCCACATGGTCACATTTGCATCTCCAGACGCCCCAATGCTaGTTCTCGGATATTCTGAAGGCATCCTACACTGTCAAGCTCCCC +
Preference number: 1 (lower is better)
Translates to: CVPTWSHLHLQTPQC*FSDILKASYTVKLP
Trigger: GGGGAGCTTGACAGTGTAGGATGCCTTCAGAATATCCGAGAAGCAGCATTGGGGCGTCTGGAGATGCAAATGTGACCATGTGGGGACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp GCTGTGGAGTGCCTTCAACAAGGGTTTTTAGACACATCCATCTGGTaGCTCATCCCAGAACCTCACAGGCCTAGGGACCTGAAATGCTCC +
Preference number: 1 (lower is better)
Translates to: AVECLQQGFLDTSIW*LIPEPHRPRDLKCS
Trigger: GGAGCATTTCAGGTCCCTAGGCCTGTGAGGTTCTGGGATGAGGCACCAGATGGATGTGTCTAAAAACCCTTGTTGAAGGCACTCCACAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp ATGTCTGCAGAACTCCAGGCTTTTGTCCAGACTGTCCCTACTGCCTaGTATATTCCTGTCCTATCCGCCCCTCCTCAAGCCTGGTGTGAT +
Preference number: 1 (lower is better)
Translates to: MSAELQAFVQTVPTA*YIPVLSAPPQAWCD
Trigger: ATCACACCAGGCTTGAGGAGGGGCGGATAGGACAGGAATATACCAGGCAGTAGGGACAGTCTGGACAAAAGCCTGGAGTTCTGCAGACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp TCCTCACATGCTGAGACAGACTCAACTTTCAGTCTGGAACTGGGCTaGGTGTCTGTCAGTCCACGCCACCCATATCCGGAGTACATCAGA +
Preference number: 1 (lower is better)
Translates to: SSHAETDSTFSLELG*VSVSPRHPYPEYIR
Trigger: TCTGATGTACTCCGGATATGGGTGGCGTGGACTGACAGACACCCAGCCCAGTTCCAGACTGAAAGTTGAGTCTGTCTCAGCATGTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 90 bp ATGCCTGGCGAATGGACATTCAGATGCCAGCATGCACATTCCACTTaGCTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTC +
Preference number: 1 (lower is better)
Translates to: MPGEWTFRCQHAHST*LRVKRLPVGVGPGL
Trigger: GAGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTCCATTCGCCAGGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 90 bp CTGGCTCCATCTCTAGACAACAGTGAGGAGTCAAGAGCCCAAGACTaGAACTCCTGCCTTCCCTTCTTTCCAGACTGCCTTGTATCCCTG +
Preference number: 1 (lower is better)
Translates to: LAPSLDNSEESRAQD*NSCLPFFPDCLVSL
Trigger: CAGGGATACAAGGCAGTCTGGAAAGAAGGGAAGGCAGGAGTTTCAGTCTTGGGCTCTTGACTCCTCACTGTTGTCTAGAGATGGAGCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 90 bp CCATATTCTATAGGACCCTCCACTTGGTATCATCTCCCTGGTGCCTaGCACAAAGTAGGTCTTGAGAGACTGAGGCCCTGGCCCTATACC +
Preference number: 1 (lower is better)
Translates to: PYSIGPSTWYHLPGA*HKVGLERLRPWPYT
Trigger: GGTATAGGGCCAGGGCCTCAGTCTCTCAAGACCTACTTTGTGTCAGGCACCAGGGAGATGATACCAAGTGGAGGGTCCTATAGAATATGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 90 bp CAAACCCTCAGCAATGGTTGTGAGTCAGTTCTGTTCCAGAATATCTaGTGCCACTGCTACAGACCCCAGCCACCTCCAGACCCTGGACAA +
Preference number: 1 (lower is better)
Translates to: QTLSNGCESVLFQNI*CHCYRPQPPPDPGQ
Trigger: TTGTCCAGGGTCTGGAGGTGGCTGGGGTCTGTAGCAGTGGCATCAGATATTCTGGAACAGAACTGACTCACAACCATTGCTGAGGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 90 bp CATCCATCTGGTGCCTCATCCCAGAACCTCACAGGCCTAGGGACCTaGAATGCTCCCCATGACAAGGCAAACTTCATATCCTCACATGCT +
Preference number: 1 (lower is better)
Translates to: HPSGASSQNLTGLGT*NAPHDKANFISSHA
Trigger: AGCATGTGAGGATATGAAGTTTGCCTTGTCATGGGGAGCATTTCAGGTCCCTAGGCCTGTGAGGTTCTGGGATGAGGCACCAGATGGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp GGGATTAGCTCTCAGGCACTTTTGGTTACTTACCCACCTGGCCTCTaGAGCAGAGAAAACCTCAGCTCACCATTGCAACTACTCTGTGGG +
Preference number: 1 (lower is better)
Translates to: GISSQALLVTYPPGL*SRENLSSPLQLLCG
Trigger: CCCACAGAGTAGTTGCAATGGTGAGCTGAGGTTTTCTCTGCTGCAGAGGCCAGGTGGGTAAGTAACCAAAAGTGCCTGAGAGCTAATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp GGGGGCCTGGGCAGTTTAGGTCTGAAGGTTGAGGAAGAGTTCCCCTaGCCACATCACCTATCAGAAGAGAGGTGGTTAAGGCAATTTATC +
Preference number: 1 (lower is better)
Translates to: GGLGSLGLKVEEEFP*PHHLSEERWLRQFI
Trigger: GATAAATTGCCTTAACCACCTCTCTTCTGATAGGTGATGTGGCCAGGGGAACTCTTCCTCAACCTTCAGACCTAAACTGCCCAGGCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp TGCAACTGCACCCTGCTGAGCCTTGGTGTCCTCAACTTTGTAATGTaGGGACAACTAAAAACCCCATGTGCCAGCCCTGGCAACATAGCA +
Preference number: 1 (lower is better)
Translates to: CNCTLLSLGVLNFVM*GQLKTPCASPGNIA
Trigger: TGCTATGTTGCCAGGGCTGGCACATGGGGTTTTTAGTTGTCCCCACATTACAAAGTTGAGGACACCAAGGCTCAGCAGGGTGCAGTTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp TTCACAACTCTACCTCAAGGGTTGCCTTTGGACTGTGTCCCCACATaGTCACATTTGCATCTCCAGACGCCCCAATGCTGCTTCTCGGAT +
Preference number: 1 (lower is better)
Translates to: FTTLPQGLPLDCVPT*SHLHLQTPQCCFSD
Trigger: ATCCGAGAAGCAGCATTGGGGCGTCTGGAGATGCAAATGTGACCATGTGGGGACACAGTCCAAAGGCAACCCTTGAGGTAGAGTTGTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp TCATATCCTCACATGCTGAGACAGACTCAACTTTCAGTCTGGAACTaGGCTGGGTGTCTGTCAGTCCACGCCACCCATATCCGGAGTACA +
Preference number: 1 (lower is better)
Translates to: SYPHMLRQTQLSVWN*AGCLSVHATHIRST
Trigger: TGTACTCCGGATATGGGTGGCGTGGACTGACAGACACCCAGCCCAGTTCCAGACTGAAAGTTGAGTCTGTCTCAGCATGTGAGGATATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp CAAACTTCATATCCTCACATGCTGAGACAGACTCAACTTTCAGTCTaGAACTGGGCTGGGTGTCTGTCAGTCCACGCCACCCATATCCGG +
Preference number: 1 (lower is better)
Translates to: QTSYPHMLRQTQLSV*NWAGCLSVHATHIR
Trigger: CCGGATATGGGTGGCGTGGACTGACAGACACCCAGCCCAGTTCCAGACTGAAAGTTGAGTCTGTCTCAGCATGTGAGGATATGAAGTTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 90 bp AAAGGGAGGGATCTAACTTACTGTCTCCACTTGGTCACTGTCATGTaGCCTCAGGCAGTACATACCTTCTCTTGCTCTCCATGCCTGGCG +
Preference number: 1 (lower is better)
Translates to: KGRDLTYCLHLVTVM*PQAVHTFSCSPCLA
Trigger: CGCCAGGCATGGAGAGCAAGAGAAGGTATGTACTGCCTGAGGTCACATGACAGTGACCAAGTGGAGACAGTAAGTTAGATCCCTCCCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 90 bp TTCACAGGGCTTAAAATCAAGGTATTGGCAGGACTGCATTCTTCTTaGGGCCCCAGAGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATG +
Preference number: 1 (lower is better)
Translates to: FTGLKIKVLAGLHSS*GPRGEEAVCIPRLM
Trigger: CATGAGCCGAGGAATGCAGACAGCCTCTTCTCCTCTGGGGCCTCAAGAAGAATGCAGTCCTGCCAATACCTTGATTTTAAGCCCTGTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 90 bp CACTCAGGTCTAGGAGAGTGGTCTTCACAACTCTACCTCAAGGGTTaGCTTTGGACTGTGTCCCCACATGGTCACATTTGCATCTCCAGA +
Preference number: 1 (lower is better)
Translates to: HSGLGEWSSQLYLKG*LWTVSPHGHICISR
Trigger: TCTGGAGATGCAAATGTGACCATGTGGGGACACAGTCCAAAGGCAACCCTTGAGGTAGAGTTGTGAAGACCACTCTCCTAGACCTGAGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp TCCCCTAAATTCAGCATGCAGTTTCTCCACCGTAGTGCAACCCAATaGATATGCAGGCATCACCGGGCCATCATCACATCACTCTGTAGG +
Preference number: 1 (lower is better)
Translates to: SPKFSMQFLHRSATQ*ICRHHRAIITSLCR
Trigger: CCTACAGAGTGATGTGATGATGGCCCGGTGATGCCTGCATATGCATTGGGTTGCACTACGGTGGAGAAACTGCATGCTGAATTTAGGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp TTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTaGACTCAGAAGAGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAA +
Preference number: 1 (lower is better)
Translates to: FHLTKSKEVASWRWP*TQKSQLLIGKGVAQ
Trigger: TTGGGCAACTCCTTTCCCTATGAGAAGCTGGCTCTTCTGAGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 90 bp CCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTaGCGTTGGCCCTGGACTCAGAAGAGCCAGCTTCTCATAGGGAAA +
Preference number: 1 (lower is better)
Translates to: PACTFHLTKSKEVAS*RWPWTQKSQLLIGK
Trigger: TTTCCCTATGAGAAGCTGGCTCTTCTGAGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 90 bp ACTGTGGTCCTGGCCATCTCACATCCAAACCCTCAGCAATGGTTGTaGGTCAGTTCTGTTCCAGAATATCTGATGCCACTGCTACAGACC +
Preference number: 1 (lower is better)
Translates to: TVVLAISHPNPQQWL*VSSVPEYLMPLLQT
Trigger: GGTCTGTAGCAGTGGCATCAGATATTCTGGAACAGAACTGACTCACAACCATTGCTGAGGGTTTGGATGTGAGATGGCCAGGACCACAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 90 bp TCTCTTGCTCTCCATGCCTGGCGAATGGACATTCAGATGCCAGCATaGACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGT +
Preference number: 1 (lower is better)
Translates to: SLALHAWRMDIQMPA*TFHLTKSKEVASWR
Trigger: ACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTCCATTCGCCAGGCATGGAGAGCAAGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 90 bp AAATTCAGCATGCAGTTTCTCCACCGTAGTGCAACCCAATGCATATaGAGGCATCACCGGGCCATCATCACATCACTCTGTAGGAACTGC +
Preference number: 1 (lower is better)
Translates to: KFSMQFLHRSATQCI*RHHRAIITSLCRNC
Trigger: GCAGTTCCTACAGAGTGATGTGATGATGGCCCGGTGATGCCTGCATATGCATTGGGTTGCACTACGGTGGAGAAACTGCATGCTGAATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp TGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTaGCCCTGGACTCAGAAGAGCCAGCTTCTCATAGGGAAAGGAGTT +
Preference number: 1 (lower is better)
Translates to: CTFHLTKSKEVASWR*PWTQKSQLLIGKGV
Trigger: AACTCCTTTCCCTATGAGAAGCTGGCTCTTCTGAGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 90 bp TCATGTGACCTCAGGCAGTACATACCTTCTCTTGCTCTCCATGCCTaGCGAATGGACATTCAGATGCCAGCATGCACATTCCACTTGACT +
Preference number: 1 (lower is better)
Translates to: SCDLRQYIPSLALHA*RMDIQMPACTFHLT
Trigger: AGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTCCATTCGCCAGGCATGGAGAGCAAGAGAAGGTATGTACTGCCTGAGGTCACATGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 90 bp GCTTTCCATGAAGCTGAGGTAGGCTTCCCTGCCTTTCCCACTTTGTaGGCTGTAAAATTAGCCTTTCCTGACCATTTTCCTGCAGGACTG +
Preference number: 1 (lower is better)
Translates to: AFHEAEVGFPAFPTL*AVKLAFPDHFPAGL
Trigger: CAGTCCTGCAGGAAAATGGTCAGGAAAGGCTAATTTTACAGCTCACAAAGTGGGAAAGGCAGGGAAGCCTACCTCAGCTTCATGGAAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 90 bp AGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTaGTGGAGCCAATCCAGGTGTCCTAGAAATATCCTAGAAATGCAG +
Preference number: 1 (lower is better)
Translates to: SNFTNTEQLPSATLM*WSQSRCPRNILEMQ
Trigger: CTGCATTTCTAGGATATTTCTAGGACACCTGGATTGGCTCCATCACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
3UTR GCA 90 bp CTGAAATCAGTTTCACAGGGCTTAAAATCAAGGTATTGGCAGGACTaGATTCTTCTTGAGGCCCCAGAGGAGAAGAGGCTGTCTGCATTC +
Preference number: 1 (lower is better)
Translates to: LKSVSQGLKSRYWQD*ILLEAPEEKRLSAF
Trigger: GAATGCAGACAGCCTCTTCTCCTCTGGGGCCTCAAGAAGAATGCAGTCCTGCCAATACCTTGATTTTAAGCCCTGTGAAACTGATTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 90 bp ATATGCAGGCATCACCGGGCCATCATCACATCACTCTGTAGGAACTaGGGTTCAGGGAAGTGGTGCAAGAAAATGCTTTTACTCTGTCTA +
Preference number: 1 (lower is better)
Translates to: ICRHHRAIITSLCRN*GSGKWCKKMLLLCL
Trigger: TAGACAGAGTAAAAGCATTTTCTTGCACCACTTCCCTGAACCGCAGTTCCTACAGAGTGATGTGATGATGGCCCGGTGATGCCTGCATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 90 bp GTCAGCAATCTGAAATCAGTTTCACAGGGCTTAAAATCAAGGTATTaGCAGGACTGCATTCTTCTTGAGGCCCCAGAGGAGAAGAGGCTG +
Preference number: 1 (lower is better)
Translates to: VSNLKSVSQGLKSRY*QDCILLEAPEEKRL
Trigger: CAGCCTCTTCTCCTCTGGGGCCTCAAGAAGAATGCAGTCCTGCCAATACCTTGATTTTAAGCCCTGTGAAACTGATTTCAGATTGCTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 90 bp CCTATTTCAATAAGGCAGCTGTATGAGACCCATGGAGAAACCCACTaGCAACTGGGAAAAGCATCCAACTGTGAGACAAGGCCTCAGTTT +
Preference number: 1 (lower is better)
Translates to: PISIRQLYETHGETH*QLGKASNCETRPQF
Trigger: AAACTGAGGCCTTGTCTCACAGTTGGATGCTTTTCCCAGTTGTCAGTGGGTTTCTCCATGGGTCTCATACAGCTGCCTTATTGAAATAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 90 bp TCTGACCTCTGCTTCCATTGTTACATACATTTTCTTCCGTCACTCTaGCACTCCTGCCTCCTTTACAGAGGCCCTTGTGATTATACTCAG +
Preference number: 1 (lower is better)
Translates to: SDLCFHCYIHFLPSL*HSCLLYRGPCDYTQ
Trigger: CTGAGTATAATCACAAGGGCCTCTGTAAAGGAGGCAGGAGTGTCAGAGTGACGGAAGAAAATGTATGTAACAATGGAAGCAGAGGTCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 90 bp GTTGAGGAAGAGTTCCCCTGGCCACATCACCTATCAGAAGAGAGGTaGTTAAGGCAATTTATCATGACTCTCAAAATTCTTCCAGCCTCT +
Preference number: 1 (lower is better)
Translates to: VEEEFPWPHHLSEER*LRQFIMTLKILPAS
Trigger: AGAGGCTGGAAGAATTTTGAGAGTCATGATAAATTGCCTTAACCACCTCTCTTCTGATAGGTGATGTGGCCAGGGGAACTCTTCCTCAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGGCTCTGGGCTCTGGCTaGAGGAGGCTGCACGGGCAG +
Preference number: 2 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGALGSG*RRLHGQ
Trigger: CTGCCCGTGCAGCCTCCTTCAGCCAGAGCCCAGAGC...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGGACGGCCAGCCCTGCTaGGGCAGAAGGAAACCCTTG +
Preference number: 2 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLDGQPC*GRRKPL
Trigger: CAAGGGTTTCCTTCTGCCCCAGCAGGGCTGGCCGTC...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCTACCAAGCAGGGGACTaGCGGCCAGCCCTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLYQAGD*RPALLG
Trigger: CCCCAGCAGGGCTGGCCGTCAGTCCCCTGCTTGGTA...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGGAGCCAAAACGCAGATaGGCTTCCTGTGCTCGAGCC +
Preference number: 2 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLEPKRR*ASCARA
Trigger: GGCTCGAGCACAGGAAGCTCATCTGCGTTTTGGCTC...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGCAGATGAGCTTCCTGTaGTCGAGCCAGGCTTGGCCA +
Preference number: 2 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLQMSFL*SSQAWP
Trigger: TGGCCAAGCCTGGCTCGAGCACAGGAAGCTCATCTG...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGTTTCAGGAGCCGGGGTaGCAAGGCCAGAATGTGGGT +
Preference number: 2 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLFQEPG*QGQNVG
Trigger: ACCCACATTCTGGCCTTGGCACCCCGGCTCCTGAAA...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR-3UTR CCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGTGCTCGAGCCAGGCTTaGCCAGGGAATTGTGTACGC +
Preference number: 2 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLCSSQA*PGNCVR
Trigger: GCGTACACAATTCCCTGGCCAAGCCTGGCTCGAGCA...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 90 bp GGAGGGCGCACAGGACCTTGTTGGGCCTTCGGAGGAGAAGTAGGGTaGGGGGCAGGTGGTGACTCTGGCAGAGGCTCTGTTTCCTCTTCC +
Preference number: 2 (lower is better)
Translates to: GGRTGPCWAFGGEVG*GAGGDSGRGSVSSS
Trigger: GGAAGAGGAAACAGAGCCTCTGCCAGAGTCACCACCTGCCCCCAACCCTACTTCTCCTCCGAAGGCCCAACAAGGTCCTGTGCGCCCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTACTGACGGCCAGCCCTaGTGGGGCAGAAGGAAACCC +
Preference number: 2 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSTDGQP*WGRRKP
Trigger: GGGTTTCCTTCTGCCCCAGCAGGGCTGGCCGTCAGT...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCGGAAGTGGGGAGCCTTaGCCTGGTTGTGCACCCCCT +
Preference number: 2 (lower is better)
Translates to: GSGHISQDLRGLHSLDSIGSGEP*PGCAPP
Trigger: AGGGGGTGCACAACCAGGGCAAGGCTCCCCACTTCC...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCGCCGGCTCCTGCTTGTaGCCCCAGCTGCCCCGACAG +
Preference number: 2 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCAGSCL*PQLPRQ
Trigger: CTGTCGGGGCAGCTGGGGCCACAAGCAGGAGCCGGC...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGCTGCCAGGTCAGATGTaGGCCACATGGGAAGTCCCA +
Preference number: 2 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGLPGQM*ATWEVP
Trigger: TGGGACTTCCCATGTGGCCCACATCTGACCTGGCAG...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 90 bp GGAGGCTGCACGGGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTaGCACAGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCT +
Preference number: 2 (lower is better)
Translates to: GGCTGSGHISQDLRG*HSLDSISSMSSSHS
Trigger: AGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCCCGTGCAGCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCGCTCTGGGCTCTGGCTaGAGGAGGCTGCACGGGCAG +
Preference number: 2 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCALGSG*RRLHGQ
Trigger: CTGCCCGTGCAGCCTCCTTCAGCCAGAGCCCAGAGC...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCAGGCCATTGCTCAACTTaGATGGCTGCCTGGGTCGGG +
Preference number: 2 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPGHCST*MAAWVG
Trigger: CCCGACCCAGGCAGCCATTCAAGTTGAGCAATGGCC...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp CCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGGCCGCTGGGCTCTGGAAAGTaGCATCCACCTCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: PLGHLFQHPLNQFLCFWPLGSGK*HPPPLW
Trigger: CCAGAGGGGAGGTGGATGGCACTTTCCAGAGCCCAG...CGGCCAGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR-3UTR GCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCCTGGGCAGAAAGTTGTaGCCGAGGCCGGCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: SLDSISSMSSSHSACKCSLGRKL*PRPAPA
Trigger: AGCAGGAGCCGGCCTCGGGCACAACTTTCTGCCCAG...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGCCCTTCTTTCCAGACTaGCTTGTATCCCTGCCTGCC +
Preference number: 2 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGPFFPD*LVSLPA
Trigger: GGCAGGCAGGGATACAAGGCAGTCTGGAAAGAAGGG...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGGCTAGAGCCACTGGCTaGCCTGGCCTGGGCCTCAAG +
Preference number: 2 (lower is better)
Translates to: GETGQMTASVTPSPTLGRARATG*PGLGLK
Trigger: CTTGAGGCCCAGGCCAGGGCAGCCAGTGGCTCTAGC...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGAAGACCTCAGGGGCTTaGACAGCCTGGACTCCATCA +
Preference number: 2 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGKTSGA*TAWTPS
Trigger: TGATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTT...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGCCAGTCCTCTTGGCTTaGACCTTTTCCTCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLPVLLA*TFSSAE
Trigger: CTCTGCTGAGGAAAAGGTCCAAGCCAAGAGGACTGG...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 90 bp CCCCACCAGACTGTGATGGGGGCCTGCCTGAATAGTGCCCATTCCTaGTGCCTGGCACAGTGCCAGCAGATGGTGACTGAATGCATGCCC +
Preference number: 2 (lower is better)
Translates to: PHQTVMGACLNSAHS*CLAQCQQMVTECMP
Trigger: GGGCATGCATTCAGTCACCATCTGCTGGCACTGTGCCAGGCACAAGGAATGGGCACTATTCAGGCAGGCCCCCATCACAGTCTGGTGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCTCAGGCTGGCGGCACTaGCAAGGCATCCACAGGGCA +
Preference number: 2 (lower is better)
Translates to: TLGNAIRTWALESAIHLPSGWRH*QGIHRA
Trigger: TGCCCTGTGGATGCCTTGTCAGTGCCGCCAGCCTGA...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
3UTR-3UTR TCA 90 bp CTGGTGGAAGACGTAGGGAGGGTTGCTGACAATCAGGTCCATGGGGCCCCAGGGTGCCCTCAGCCACTCTaGTGTGATGGAGCCAATCCA +
Preference number: 2 (lower is better)
Translates to: LVEDVGRVADNQVHGAPGCPQPL*CDGANP
Trigger: TGGATTGGCTCCATCACATCAGAGTGGCTGAGGGCA...CCCTGGGGCCCCATGGACCTGATTGTCAGCAACCCTCCCTACGTCTTCCACCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR-3UTR TCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTCATCAGATGGACGCCTaGGGGCACTGGGTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSHQMDA*GHWVLP
Trigger: AGGAAGGACCCAGTGCCCTCAGGCGTCCATCTGATG...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCGCTTATCCACAGCAATaGCTCGGCTCTGGGGGAGCT +
Preference number: 2 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLAYPQQ*LGSGGA
Trigger: AGCTCCCCCAGAGCCGAGTCATTGCTGTGGATAAGC...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR-3UTR GCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTCTCAGCTCTCCCAGCTaGAGCAGAGGATGCTGCCTA +
Preference number: 2 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSLSSPS*SRGCCL
Trigger: TAGGCAGCATCCTCTGCTGCAGCTGGGAGAGCTGAG...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCGCTTGTGGCCCCAGCTaGCCCGACAGTGTCACTCTC +
Preference number: 2 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSACGPS*PDSVTL
Trigger: GAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAGC...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTAGGGGAGATGTAGGCTaGCAGGCTACCAGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSRGDVG*QATSLL
Trigger: CAGCAGGCTGGTAGCCTGGCAGCCTACATCTCCCCT...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGTGGGGAGCCTTGCCCTaGTTGTGCACCCCCTTCGCC +
Preference number: 2 (lower is better)
Translates to: RSHPREGQILGLKSRLVWWGALP*LCTPFA
Trigger: GGCGAAGGGGGTGCACAACCAGGGCAAGGCTCCCCA...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCGCCGGCTCCTGCTTGTaGCCCCAGCTGCCCCGACAG +
Preference number: 2 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFAGSCL*PQLPRQ
Trigger: CTGTCGGGGCAGCTGGGGCCACAAGCAGGAGCCGGC...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTCTGCCAGGTCAGATGTaGGCCACATGGGAAGTCCCA +
Preference number: 2 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSLPGQM*ATWEVP
Trigger: TGGGACTTCCCATGTGGCCCACATCTGACCTGGCAG...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCCTTAGGCTGAGCCCCTaGAAGTCCCACTCTCCAAGG +
Preference number: 2 (lower is better)
Translates to: GSGHISQDLRGLHSLDSILRLSP*KSHSPR
Trigger: CCTTGGAGAGTGGGACTTCCAGGGGCTCAGCCTAAG...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR-3UTR CCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGAATGAGGGGGCTGCCTaGGGATCCCACAGCATGGGA +
Preference number: 2 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWNEGAA*GSHSMG
Trigger: TCCCATGCTGTGGGATCCCCAGGCAGCCCCCTCATT...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR CAA 90 bp TCCTTGAGCCAAAACGCAGATGAGCTTCCTGTGCTCGAGCCAGGCTaGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGAC +
Preference number: 2 (lower is better)
Translates to: SLSQNADELPVLEPG*ARELCTHAPRAVED
Trigger: GTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGCCTGGCTCGAGCACAGGAAGCTCATCTGCGTTTTGGCTCAAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 90 bp GCTGTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATaGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTC +
Preference number: 2 (lower is better)
Translates to: AVAQGSGALESSKWP*LNLNGCLGRAEGQV
Trigger: GACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 90 bp TGCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTaGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGC +
Preference number: 2 (lower is better)
Translates to: CSYCRQGQPVLLVWL*RRDQVHLSLRSGHC
Trigger: GCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCTCAGGCTGGCGGCACTaGCAAGGCATCCACAGGGCA +
Preference number: 2 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPSGWRH*QGIHRA
Trigger: TGCCCTGTGGATGCCTTGTCAGTGCCGCCAGCCTGA...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
3UTR-3UTR TCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTTGCCCTCAGCCACTCTaGTGTGATGGAGCCAATCCA +
Preference number: 2 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSCPQPL*CDGANP
Trigger: TGGATTGGCTCCATCACATCAGAGTGGCTGAGGGCA...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGATCCAAGGCCAGGAGTaGGGACTCACGTGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWIQGQE*GLTCLP
Trigger: AGGAAGGCACGTGAGTCCTCACTCCTGGCCTTGGAT...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCACTGGGAGCTGCAGTGTaGCCTCTACCAAATGTGTCC +
Preference number: 2 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPLGAAV*PLPNVS
Trigger: GGACACATTTGGTAGAGGTCACACTGCAGCTCCCAG...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCCAGATGAGCTTCCTGTaGTCGAGCCAGGCTTGGCCA +
Preference number: 2 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGQMSFL*SSQAWP
Trigger: TGGCCAAGCCTGGCTCGAGCACAGGAAGCTCATCTG...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGGTACATACCTTCTCTTaGTCTCCATGCCTGGCGAAT +
Preference number: 2 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLVHTFS*SPCLAN
Trigger: ATTCGCCAGGCATGGAGAGCAAGAGAAGGTATGTAC...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTGCAGCTCAGAGTCCATaGAGCTGGGGCTGGGCACAG +
Preference number: 2 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPAAQSP*SWGWAQ
Trigger: CTGTGCCCAGCCCCAGCTGCATGGACTCTGAGCTGC...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTGCCTTGCCCTGGTTGTaGACCCCCTTCGCCCTCCCC +
Preference number: 2 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCALPWL*TPFALP
Trigger: GGGGAGGGCGAAGGGGGTGCACAACCAGGGCAAGGC...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAAAAGAGACCTGGCTCGTaGCCCAGCCCTGCTCCTGTC +
Preference number: 2 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQKRPGS*PSPAPV
Trigger: GACAGGAGCAGGGCTGGGGCACGAGCCAGGTCTCTT...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGCTCTCAATACTTTACTaGCCATATCCCCCGATACCC +
Preference number: 2 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLLSILY*PYPPIP
Trigger: GGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAG...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCGTCCCATGCATCAGATaGACGCCTGAGGGCACTGGG +
Preference number: 2 (lower is better)
Translates to: SVHATHIRSTSESGFSGSVPCIR*TPEGTG
Trigger: CCCAGTGCCCTCAGGCGTCCATCTGATGCATGGGAC...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCCTCCTTGACATATGCTaGTGGTGGTGGGGAGGCTGT +
Preference number: 2 (lower is better)
Translates to: GSGHISQDLRGLHSLDSILLDIC*WWWGGC
Trigger: ACAGCCTCCCCACCACCACCAGCATATGTCAAGGAG...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTAGGCTGCACGGGCAGTaGGCACATCTCTCAAGACCT +
Preference number: 2 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSRLHGQ*AHLSRP
Trigger: AGGTCTTGAGAGATGTGCCCACTGCCCGTGCAGCCT...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCCTCCTGTCTATGCTCTaGGCTCTGGCTGAAGGAGGC +
Preference number: 2 (lower is better)
Translates to: SLDSISSMSSSHSACKCSLLSML*ALAEGG
Trigger: GCCTCCTTCAGCCAGAGCCCAGAGCATAGACAGGAG...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 90 bp GCAAAGACCTCCAGACCCTCCCCTCCAGAAAGCAGGCAGTCATCCTaGAGCCAAAACGCAGATGAGCTTCCTGTGCTCGAGCCAGGCTTG +
Preference number: 2 (lower is better)
Translates to: AKTSRPSPPESRQSS*SQNADELPVLEPGL
Trigger: CAAGCCTGGCTCGAGCACAGGAAGCTCATCTGCGTTTTGGCTCAAGGATGACTGCCTGCTTTCTGGAGGGGAGGGTCTGGAGGTCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 90 bp TCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCTaGACATATGCTGGTGGTGGTGGGGAGGCTGTTCGAGTCTCTGGC +
Preference number: 2 (lower is better)
Translates to: SISSMSSSHSACKCS*TYAGGGGEAVRVSG
Trigger: GCCAGAGACTCGAACAGCCTCCCCACCACCACCAGCATATGTCAAGGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 90 bp CGGGCCGACAGGGAGAGAGCTCAGTCTGCGTCTGCTGCTTTCTGTTaGATTCATCACTTTCCCCTTCACCCTGGAGCCCACGTTGGCTGT +
Preference number: 2 (lower is better)
Translates to: RADRERAQSASAAFC*IHHFPLHPGAHVGC
Trigger: ACAGCCAACGTGGGCTCCAGGGTGAAGGGGAAAGTGATGAATCAAACAGAAAGCAGCAGACGCAGACTGAGCTCTCTCCCTGTCGGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 90 bp CATGGGGCAGTGTTTGAGCTTACATGGGCTCTGCGCTCCCATGACTaGGAGGCAGTGGTTGGGCCTCTGAGGCAGAGTAACACCACACAC +
Preference number: 2 (lower is better)
Translates to: HGAVFELTWALRSHD*EAVVGPLRQSNTTH
Trigger: GTGTGTGGTGTTACTCTGCCTCAGAGGCCCAACCACTGCCTCCAAGTCATGGGAGCGCAGAGCCCATGTAAGCTCAAACACTGCCCCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 90 bp AGGCTCAGTCTTCAGTTGGGAGCTGGCAGAAAACACAAGCCACGGTaGTCCCACCCAAGGGGTGAGGGAGCTGGGCATGTGTCTACCAAC +
Preference number: 2 (lower is better)
Translates to: RLSLQLGAGRKHKPR*SHPRGEGAGHVSTN
Trigger: GTTGGTAGACACATGCCCAGCTCCCTCACCCCTTGGGTGGGACAACCGTGGCTTGTGTTTTCTGCCAGCTCCCAACTGAAGACTGAGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTATAGGAACAGAATGGTaGCACAGCTCTGCTCAGGCC +
Preference number: 2 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSIGTEW*HSSAQA
Trigger: GGCCTGAGCAGAGCTGTGTCACCATTCTGTTCCTAT...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATGCCCAAGGTCCCACTaGAGGACACAGCCCTGGAAC +
Preference number: 2 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQCPRSH*RTQPWN
Trigger: GTTCCAGGGCTGTGTCCTGCAGTGGGACCTTGGGCA...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTGCAGCTCAGAGTCCATaGAGCTGGGGCTGGGCACAG +
Preference number: 2 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPAAQSP*SWGWAQ
Trigger: CTGTGCCCAGCCCCAGCTGCATGGACTCTGAGCTGC...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAAAGGGGAGATGTAGGCTaGCAGGCTACCAGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQRGDVG*QATSLL
Trigger: CAGCAGGCTGGTAGCCTGGCAGCCTACATCTCCCCT...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCCCGGAATACATGGGCTaGCAGGTCAGATGTGGGCCA +
Preference number: 2 (lower is better)
Translates to: SVHATHIRSTSESGFSGSPEYMG*QVRCGP
Trigger: TGGCCCACATCTGACCTGGCAGCCCATGTATTCCGG...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCAGGAAACCTGGCGCCTaGTCCTACTGCCGCCAAGGA +
Preference number: 2 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCRKPGA*SYCRQG
Trigger: TCCTTGGCGGCAGTAGGAGCAGGCGCCAGGTTTCCT...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp AACGTGGATGTGCGACCCAGGAACTGTGCAGCAAAGACCTCCAGACCCTCCCCTCTGACAAGCTCCGGGTaGCTTGGGTCCACTTCTAAG +
Preference number: 2 (lower is better)
Translates to: NVDVRPRNCAAKTSRPSPLTSSG*LGSTSK
Trigger: CTTAGAAGTGGACCCAAGGCACCCGGAGCTTGTCAG...AGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR-3UTR CCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGTGGAATGAGACAGCCTaGTTTGCCATGTTTCTTAGG +
Preference number: 2 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLWNETA*FAMFLR
Trigger: CCTAAGAAACATGGCAAACCAGGCTGTCTCATTCCA...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTAGTTGGCGTTGGCCCTaGACTCAGAAGAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSSWRWP*TQKSQL
Trigger: AAGCTGGCTCTTCTGAGTCCAGGGCCAACGCCAACT...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGGGGGGACTAAGGAAGTaGGGAGCCTTGCCCTGGTTG +
Preference number: 2 (lower is better)
Translates to: RSHPREGQILGLKSRLVWGGLRK*GALPWL
Trigger: CAACCAGGGCAAGGCTCCCCACTTCCTTAGTCCCCC...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
58% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGAGGCTGCACGGGCAGTaGGCACATCTCTCAAGACCT +
Preference number: 2 (lower is better)
Translates to: GETGQMTASVTPSPTLGRRLHGQ*AHLSRP
Trigger: AGGTCTTGAGAGATGTGCCCACTGCCCGTGCAGCCT...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 90 bp CCTTCCCTTCTTTCCAGACTGCCTTGTATCCCTGCCTGCCTTATGTaGGTCCCATGCATCAGATGGACGCCTGAGGGCACTGGGTCCTTC +
Preference number: 2 (lower is better)
Translates to: PSLLSRLPCIPACLM*VPCIRWTPEGTGSF
Trigger: GAAGGACCCAGTGCCCTCAGGCGTCCATCTGATGCATGGGACCAACATAAGGCAGGCAGGGATACAAGGCAGTCTGGAAAGAAGGGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 90 bp GTTAGTGAAAGCTGGGAGGAGCCTGTGGTTAGTTCCCAGGCGGGTTaGCTGGGAGAATCACCAGCCTCCATTTCCCAGAGGTCAACGGAG +
Preference number: 2 (lower is better)
Translates to: VSESWEEPVVSSQAG*LGESPASISQRSTE
Trigger: CTCCGTTGACCTCTGGGAAATGGAGGCTGGTGATTCTCCCAGCAAACCCGCCTGGGAACTAACCACAGGCTCCTCCCAGCTTTCACTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCATCAGGCTGGCGGCACTaGCAAGGCATCCACAGGGCA +
Preference number: 2 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRASGWRH*QGIHRA
Trigger: TGCCCTGTGGATGCCTTGTCAGTGCCGCCAGCCTGA...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
3UTR-3UTR TCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCTCAGCCACTCTGATGTaGTGGAGCCAATCCAGGTGT +
Preference number: 2 (lower is better)
Translates to: SLDSISSMSSSHSACKCSSATLM*WSQSRC
Trigger: ACACCTGGATTGGCTCCATCACATCAGAGTGGCTGA...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAAATCCAAGGCCAGGAGTaGGGACTCACGTGCCTTCCT +
Preference number: 2 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQIQGQE*GLTCLP
Trigger: AGGAAGGCACGTGAGTCCTCACTCCTGGCCTTGGAT...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCGCCTCCTGGTGGCCATaGGTCTGCACAGACCAGAGC +
Preference number: 2 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFASWWP*VCTDQS
Trigger: GCTCTGGTCTGTGCAGACTCATGGCCACCAGGAGGC...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCGCAGGCAAAGGTCTGTaGGCATGGGGGACTAAGGAA +
Preference number: 2 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSAGKGL*AWGTKE
Trigger: TTCCTTAGTCCCCCATGCTCACAGACCTTTGCCTGC...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCTCAGGGCAGCTACCCTaGGATGCTGCTGAAGACAGC +
Preference number: 2 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCSGQLP*DAAEDS
Trigger: GCTGTCTTCAGCAGCATCTCAGGGTAGCTGCCCTGA...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGGCCTACTCAGAGCACTaGTGGGGCCTTGGGAGGGGC +
Preference number: 2 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMAYSEH*WGLGRG
Trigger: GCCCCTCCCAAGGCCCCATCAGTGCTCTGAGTAGGC...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAAGCAGAAGGAAACCCTTaGCCCAGTGCTACCTGGGAG +
Preference number: 2 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQAEGNP*PSATWE
Trigger: CTCCCAGGTAGCACTGGGGCAAGGGTTTCCTTCTGC...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGAATCAAGCCAGTGGCTaGAGGCTTGAGGCCCCGCCT +
Preference number: 2 (lower is better)
Translates to: VAQGSGALESSKWPLLNLNQASG*RLEAPP
Trigger: AGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATT...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCACTGCCTTGTATCCCTaGCTGCCTTATGTTGGTCCC +
Preference number: 2 (lower is better)
Translates to: SLDSISSMSSSHSACKCSTALYP*LPYVGP
Trigger: GGGACCAACATAAGGCAGGCAGGGATACAAGGCAGT...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGGCATGGTACAGAAGGTaGCAGCAGAGGTATGGGCTA +
Preference number: 2 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWAWYRR*QQRYGL
Trigger: TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGC...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAAAAGCGGGGGAAATCCTaGTCTCCTCCCACAGCTACC +
Preference number: 2 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQKRGKS*SPPTAT
Trigger: GGTAGCTGTGGGAGGAGAGCAGGATTTCCCCCGCTT...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCTCTCCAAGGATGTACTaGACCGGCATCCTCTGCAAT +
Preference number: 2 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLSPRMY*TGILCN
Trigger: ATTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGA...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR-3UTR CCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTATGCACCCAGGGCAGTaGAGGACTAATCAATCCCTG +
Preference number: 2 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSMHPGQ*RTNQSL
Trigger: CAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCAT...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGTGCACAGACCAGAGCTaGGGTGGAGGCCACAACCCT +
Preference number: 2 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMCTDQS*GGGHNP
Trigger: AGGGTTGTGGCCTCCACCCCAGCTCTGGTCTGTGCA...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTCTTGCTCTCCATGCCTaGCGAATGGACATTCAGATG +
Preference number: 2 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSLALHA*RMDIQM
Trigger: CATCTGAATGTCCATTCGCCAGGCATGGAGAGCAAG...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCTCGAGTCTCTGGCTTTaGCCTCAGGAGCAAGGGAGG +
Preference number: 2 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCSSLWL*PQEQGR
Trigger: CCTCCCTTGCTCCTGAGGCCAAAGCCAGAGACTCGA...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGGACATATGCTGGTGGTaGTGGGGAGGCTGTTCGAGT +
Preference number: 2 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILDICWW*WGGCSS
Trigger: ACTCGAACAGCCTCCCCACCACCACCAGCATATGTC...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGGTTTGGGGCAAGGATTaGGAGCAGCCAATAGCCCAG +
Preference number: 2 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILVWGKD*EQPIAQ
Trigger: CTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAAC...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGATTGTTTGCACCGCCTaGGCAAAGGGAAGGTGTGTG +
Preference number: 2 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWIVCTA*AKGRCV
Trigger: CACACACCTTCCCTTTGCCCAGGCGGTGCAAACAAT...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCAAGGTTTCTGAAGGCATaGTACAGAAGGTGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPRFLKA*YRRCQQ
Trigger: CTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCT...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGTCTGGAGATGGGCCATaGAGGCCAGCCTTGCACTTT +
Preference number: 2 (lower is better)
Translates to: GETGQMTASVTPSPTLGRSGDGP*RPALHF
Trigger: AAAGTGCAAGGCTGGCCTCCATGGCCCATCTCCAGA...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGCATAGCTGGGGCAGGTaGAGGTCAGCCCAGTTCAGG +
Preference number: 2 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMHSWGR*RSAQFR
Trigger: CCTGAACTGGGCTGACCTCCACCTGCCCCAGCTATG...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp ATGGGTCAGAGAGATAGCAGCTTCCCGCTTATCCACAGCAATGACTCGGCTCTGACAGCATGGGACCTCTaGGCCACCTCTTCCAGCACC +
Preference number: 2 (lower is better)
Translates to: MGQRDSSFPLIHSNDSALTAWDL*ATSSST
Trigger: GGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGT...CAGAGCCGAGTCATTGCTGTGGATAAGCGGGAAGCTGCTATCTCTCTGACCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR CAA 90 bp GGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTTaGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGG +
Preference number: 2 (lower is better)
Translates to: GHKRTHLSHGEPAKC*GQGLGAANSPGSRW
Trigger: CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 90 bp CTGGAGTCCCAGCAGTATCAATCCCAGGTGTGGAAACCTCTTCCTTaGCGTGGCTCCCCTGCGTTGTTTGCAGGAGAGGTCTGGAGGAAA +
Preference number: 2 (lower is better)
Translates to: LESQQYQSQVWKPLP*RGSPALFAGEVWRK
Trigger: TTTCCTCCAGACCTCTCCTGCAAACAACGCAGGGGAGCCACGCAAAGGAAGAGGTTTCCACACCTGGGATTGATACTGCTGGGACTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTTACCAAGCAGGGGACTaGCGGCCAGCCCTGCTGGGG +
Preference number: 2 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCYQAGD*RPALLG
Trigger: CCCCAGCAGGGCTGGCCGTCAGTCCCCTGCTTGGTA...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCATTTCCTGTCGCTGTTaGCAGGAAGGCTGGATCTGC +
Preference number: 2 (lower is better)
Translates to: SVHATHIRSTSESGFSGSISCRC*QEGWIC
Trigger: GCAGATCCAGCCTTCCTGTCAACAGCGACAGGAAAT...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGGAAGCCAAGGCTGAGTaGGGTGAAGTCATCTGCCCA +
Preference number: 2 (lower is better)
Translates to: RSHPREGQILGLKSRLVWEAKAE*GEVICP
Trigger: TGGGCAGATGACTTCACCTCACTCAGCCTTGGCTTC...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATCTGGGCTCTGGAAAGTaGCATCCACCTCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: IPPQQFHQHRATALSHSDLGSGK*HPPPLW
Trigger: CCAGAGGGGAGGTGGATGGCACTTTCCAGAGCCCAG...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
3UTR-3UTR GCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCCTGGGCTCTGGAAAGTaGCATCCACCTCCCCTCTGG +
Preference number: 2 (lower is better)
Translates to: TLLAISPDTPTAISPTQSLGSGK*HPPPLW
Trigger: CCAGAGGGGAGGTGGATGGCACTTTCCAGAGCCCAG...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
3UTR-3UTR GCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTAAAAATGCCACAATGTaGCAAGCCAGGCACATCCCA +
Preference number: 2 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSKNATM*QARHIP
Trigger: TGGGATGTGCCTGGCTTGGCACATTGTGGCATTTTT...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCAAAAATGCCACAATGTaGCAAGCCAGGCACATCCCA +
Preference number: 2 (lower is better)
Translates to: GSGHISQDLRGLHSLDSIKNATM*QARHIP
Trigger: TGGGATGTGCCTGGCTTGGCACATTGTGGCATTTTT...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTGAAGGCAAGGAAAAATaGCACAATGTGCCAAGCCAG +
Preference number: 2 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSEGKEK*HNVPSQ
Trigger: CTGGCTTGGCACATTGTGGCATTTTTCCTTGCCTTC...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCCTACACTCCTGTCTATaGTCTGGGCTCTGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: SVHATHIRSTSESGFSGSLHSCL*SGLWLK
Trigger: CTTCAGCCAGAGCCCAGAGCATAGACAGGAGTGTAG...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTCCTGTGCTGACCTCTaGCAGGGCCTGCCCAGTACA +
Preference number: 2 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPSCADL*QGLPST
Trigger: TGTACTGGGCAGGCCCTGGCAGAGGTCAGCACAGGA...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR-3UTR CCA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTGTTGCCAGTTGGCGTTaGCCCTGGACTCAGAAGAGC +
Preference number: 2 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPVASWR*PWTQKS
Trigger: GCTCTTCTGAGTCCAGGGCCAACGCCAACTGGCAAC...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGTGGGTGGGAGTACAATaGCGTGATCTTGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: GETGQMTASVTPSPTLGRWVGVQ*RDLGSL
Trigger: CAGTGAGCCAAGATCACGCCATTGTACTCCCACCCA...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 90 bp TGCCCAGTACAGCTAAGCAAAGCACCGGTATTGGAAATCCTGGGGTaGGTTAGTGAAAGCTGGGAGGAGCCTGTGGTTAGTTCCCAGGCG +
Preference number: 2 (lower is better)
Translates to: CPVQLSKAPVLEILG*VSESWEEPVVSSQA
Trigger: CGCCTGGGAACTAACCACAGGCTCCTCCCAGCTTTCACTAACCAACCCCAGGATTTCCAATACCGGTGCTTTGCTTAGCTGTACTGGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 90 bp CCCAGGTGTGGAAACCTCTTCCTTTGCGTGGCTCCCCTGCGTTGTTaGCAGGAGAGGTCTGGAGGAAAGAGAGTCACCCCAGAAATACAT +
Preference number: 2 (lower is better)
Translates to: PRCGNLFLCVAPLRC*QERSGGKRVTPEIH
Trigger: ATGTATTTCTGGGGTGACTCTCTTTCCTCCAGACCTCTCCTGCAAACAACGCAGGGGAGCCACGCAAAGGAAGAGGTTTCCACACCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 90 bp CAATCCCAGGTGTGGAAACCTCTTCCTTTGCGTGGCTCCCCTGCGTaGTTTGCAGGAGAGGTCTGGAGGAAAGAGAGTCACCCCAGAAAT +
Preference number: 2 (lower is better)
Translates to: QSQVWKPLPLRGSPA*FAGEVWRKESHPRN
Trigger: ATTTCTGGGGTGACTCTCTTTCCTCCAGACCTCTCCTGCAAACAACGCAGGGGAGCCACGCAAAGGAAGAGGTTTCCACACCTGGGATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGAAGCCTTCAGTTAAATaGACGTGGATGTGCGACCCA +
Preference number: 2 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWKPSVK*TWMCDP
Trigger: TGGGTCGCACATCCACGTTCATTTAACTGAAGGCTT...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCATCTCTAGACAACAGTaGGGAGTCAAGAGCCCAAGA +
Preference number: 2 (lower is better)
Translates to: SLDSISSMSSSHSACKCSISRQQ*GVKSPR
Trigger: TCTTGGGCTCTTGACTCCTCACTGTTGTCTAGAGAT...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACACTTGGTCCCAGTCTCTaGGGTCCTCTCTGGACCCAG +
Preference number: 2 (lower is better)
Translates to: LLLLSLSIKETARWASDTLGPSL*GPLWTQ
Trigger: CTGGGTCCAGAGAGGACCTCAGAGACTGGGACCAAG...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp CTGCTCCATGTCCTGGTGGAAGACGTAGGGAGGGTTGCTGACAATCAGGTCCATTGTCCAGCTCCTTTCTaGGGTCATGTCGAGGTGGAT +
Preference number: 2 (lower is better)
Translates to: LLHVLVEDVGRVADNQVHCPAPF*GHVEVD
Trigger: ATCCACCTCGACATGACCTCAGAAAGGAGCTGGACA...ATGGACCTGATTGTCAGCAACCCTCCCTACGTCTTCCACCAGGACATGGAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR-3UTR GCA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTCAGATGAGCTTCCTGTaGTCGAGCCAGGCTTGGCCA +
Preference number: 2 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCQMSFL*SSQAWP
Trigger: TGGCCAAGCCTGGCTCGAGCACAGGAAGCTCATCTG...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCTGCAGCAGAGGATGCTaGCTATTGGACCATACTGCC +
Preference number: 2 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCCSRGC*LLDHTA
Trigger: GGCAGTATGGTCCAATAGGCAGCATCCTCTGCTGCA...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGCATAGGGAAAGGAGTTaGCCAAGGTCCCACTGCAGG +
Preference number: 2 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMHRERS*PRSHCR
Trigger: CCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATG...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCTTCTCTTGCTCTCCATaGCTGGCGAATGGACATTCA +
Preference number: 2 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGFSCSP*LANGHS
Trigger: TGAATGTCCATTCGCCAGGCATGGAGAGCAAGAGAA...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCATCAGCAGAGTCAAGCTaGACATTTTTCTGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPSAESS*TFFWAE
Trigger: TTCTGCCCAGAAAAATGTGCAGCTTGACTCTGCTGA...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCGAAGGCAAGGAAAAATaGCACAATGTGCCAAGCCAG +
Preference number: 2 (lower is better)
Translates to: SLDSISSMSSSHSACKCSEGKEK*HNVPSQ
Trigger: CTGGCTTGGCACATTGTGGCATTTTTCCTTGCCTTC...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGAACCTGACCTGCAACTaGACCCTGCTGAGCCTTGGT +
Preference number: 2 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMNLTCN*TLLSLG
Trigger: ACCAAGGCTCAGCAGGGTGCAGTTGCAGGTCAGGTT...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGCTATGCAACCTGACCTaGAACTGCACCCTGCTGAGC +
Preference number: 2 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMLCNLT*NCTLLS
Trigger: GCTCAGCAGGGTGCAGTTGCAGGTCAGGTTGCATAG...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGCCACATGGTCACATTTaGATCTCCAGACGCCCCAAT +
Preference number: 2 (lower is better)
Translates to: GETGQMTASVTPSPTLGRPHGHI*ISRRPN
Trigger: ATTGGGGCGTCTGGAGATGCAAATGTGACCATGTGG...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp GGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGAATTCTCCAAGGATGTACTaGACCGGCATCCTCTGCAAT +
Preference number: 2 (lower is better)
Translates to: GHLFQHPLNQFLCFWPRNSPRMY*TGILCN
Trigger: ATTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGA...ATTCCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
3UTR-3UTR CCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCTGCTCGAGCCAGGCTTaGCCAGGGAATTGTGTACGC +
Preference number: 2 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGCSSQA*PGNCVR
Trigger: GCGTACACAATTCCCTGGCCAAGCCTGGCTCGAGCA...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCTCCATGCCTGGCGAATaGACATTCAGATGCCAGCAT +
Preference number: 2 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSSMPGE*TFRCQH
Trigger: ATGCTGGCATCTGAATGTCCATTCGCCAGGCATGGA...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCCACTGCACTCTCTTCTaGTGCAACATCCACAAGCTC +
Preference number: 2 (lower is better)
Translates to: SVHATHIRSTSESGFSGSHCTLF*CNIHKL
Trigger: GAGCTTGTGGATGTTGCACCAGAAGAGAGTGCAGTG...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGAGCTCTTTAGGCCCCTaGTCCCCAGAAATGCATTCA +
Preference number: 2 (lower is better)
Translates to: GETGQMTASVTPSPTLGRSSLGP*SPEMHS
Trigger: TGAATGCATTTCTGGGGACCAGGGGCCTAAAGAGCT...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 90 bp AGGTCTAGGAGAGTGGTCTTCACAACTCTACCTCAAGGGTTGCCTTaGGACTGTGTCCCCACATGGTCACATTTGCATCTCCAGACGCCC +
Preference number: 2 (lower is better)
Translates to: RSRRVVFTTLPQGLP*DCVPTWSHLHLQTP
Trigger: GGGCGTCTGGAGATGCAAATGTGACCATGTGGGGACACAGTCCAAAGGCAACCCTTGAGGTAGAGTTGTGAAGACCACTCTCCTAGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 90 bp TTCCTTGGTTTCAGGCTGCTCCAGGGGATTAGCTCTCAGGCACTTTaGGTTACTTACCCACCTGGCCTCTGCAGCAGAGAAAACCTCAGC +
Preference number: 2 (lower is better)
Translates to: FLGFRLLQGISSQAL*VTYPPGLCSRENLS
Trigger: GCTGAGGTTTTCTCTGCTGCAGAGGCCAGGTGGGTAAGTAACCAAAAGTGCCTGAGAGCTAATCCCCTGGAGCAGCCTGAAACCAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCTCAGGCTGGCGGCACTaGCAAGGCATCCACAGGGCA +
Preference number: 2 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFSGWRH*QGIHRA
Trigger: TGCCCTGTGGATGCCTTGTCAGTGCCGCCAGCCTGA...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
3UTR-3UTR TCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAAGACACATGGGTTATTTaGAACCCCAGGGGGTCAACT +
Preference number: 2 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQDTWVI*NPRGST
Trigger: AGTTGACCCCCTGGGGTTTCAAATAACCCATGTGTC...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGATTTCCTGTCGCTGTTaGCAGGAAGGCTGGATCTGC +
Preference number: 2 (lower is better)
Translates to: VAQGSGALESSKWPLLNLISCRC*QEGWIC
Trigger: GCAGATCCAGCCTTCCTGTCAACAGCGACAGGAAAT...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAATTGGTCACTGTCATGTaGCCTCAGGCAGTACATACC +
Preference number: 2 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQLVTVM*PQAVHT
Trigger: GGTATGTACTGCCTGAGGTCACATGACAGTGACCAA...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTGCAGGCAAAGGTCTGTaGGCATGGGGGACTAAGGAA +
Preference number: 2 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCAGKGL*AWGTKE
Trigger: TTCCTTAGTCCCCCATGCTCACAGACCTTTGCCTGC...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCGCAGGCAAAGGTCTGTaGGCATGGGGGACTAAGGAA +
Preference number: 2 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFAGKGL*AWGTKE
Trigger: TTCCTTAGTCCCCCATGCTCACAGACCTTTGCCTGC...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGGGGATCAGGTGCACTTaGGTCTTCGAAGTGGCCATT +
Preference number: 2 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMGIRCT*VFEVAI
Trigger: AATGGCCACTTCGAAGACTCAAGTGCACCTGATCCC...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCAGCTGCAGCAGAGGATaGTGCCTATTGGACCATACT +
Preference number: 2 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCSCSRG*CLLDHT
Trigger: AGTATGGTCCAATAGGCAGCATCCTCTGCTGCAGCT...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCTGGGGCACTGGGAGCTaGAGTGTGACCTCTACCAAA +
Preference number: 2 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFWGTGS*SVTSTK
Trigger: TTTGGTAGAGGTCACACTGCAGCTCCCAGTGCCCCA...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCTCAGCAGAGTCAAGCTaGACATTTTTCTGGGCAGAA +
Preference number: 2 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGSAESS*TFFWAE
Trigger: TTCTGCCCAGAAAAATGTGCAGCTTGACTCTGCTGA...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGCTTATGTTGGTCCCATaGATCAGATGGACGCCTGAG +
Preference number: 2 (lower is better)
Translates to: RSHPREGQILGLKSRLVWLMLVP*IRWTPE
Trigger: CTCAGGCGTCCATCTGATGCATGGGACCAACATAAG...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTCTACACTCCTGTCTATaGTCTGGGCTCTGGCTGAAG +
Preference number: 2 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPLHSCL*SGLWLK
Trigger: CTTCAGCCAGAGCCCAGAGCATAGACAGGAGTGTAG...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCAAAAGAGCAGCCTCAATaGTTCTCTAACCCTGTAACT +
Preference number: 2 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPKEQPQ*FSNPVT
Trigger: AGTTACAGGGTTAGAGAAGCATTGAGGCTGCTCTTT...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCTGGAATGAGACAGCCTaGTTTGCCATGTTTCTTAGG +
Preference number: 2 (lower is better)
Translates to: SLDSISSMSSSHSACKCSWNETA*FAMFLR
Trigger: CCTAAGAAACATGGCAAACCAGGCTGTCTCATTCCA...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp AACGTGGATGTGCGACCCAGGAACTGTGCAGCAAAGACCTCCAGACCCTCCCCTTGGAATGAGACAGCCTaGTTTGCCATGTTTCTTAGG +
Preference number: 2 (lower is better)
Translates to: NVDVRPRNCAAKTSRPSPWNETA*FAMFLR
Trigger: CCTAAGAAACATGGCAAACCAGGCTGTCTCATTCCA...AGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGGCCAGGCACATCCCATaGGCTCCTCACATGCATCCT +
Preference number: 2 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMARHIP*APHMHP
Trigger: AGGATGCATGTGAGGAGCCCATGGGATGTGCCTGGC...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGCTGCCTGCCTTATGTTaGTCCCATGCATCAGATGGA +
Preference number: 2 (lower is better)
Translates to: RSHPREGQILGLKSRLVWLPALC*SHASDG
Trigger: TCCATCTGATGCATGGGACCAACATAAGGCAGGCAG...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGAAGGCCAGGTCCTCATaGCTTCCCATCCCTAATGAC +
Preference number: 2 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMKARSS*LPIPND
Trigger: GTCATTAGGGATGGGAAGCCATGAGGACCTGGCCTT...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGATGAGAGCATCATACTaGGAGTCAGGAGTCAAGTGC +
Preference number: 2 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILMRASY*ESGVKC
Trigger: GCACTTGACTCCTGACTCCCAGTATGATGCTCTCAT...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 90 bp CATGCCTGGCGAATGGACATTCAGATGCCAGCATGCACATTCCACTaGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACT +
Preference number: 2 (lower is better)
Translates to: HAWRMDIQMPACTFH*TKSKEVASWRWPWT
Trigger: AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTCCATTCGCCAGGCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 90 bp CTACCTCAAGGGTTGCCTTTGGACTGTGTCCCCACATGGTCACATTaGCATCTCCAGACGCCCCAATGCTGCTTCTCGGATATTCTGAAG +
Preference number: 2 (lower is better)
Translates to: LPQGLPLDCVPTWSH*HLQTPQCCFSDILK
Trigger: CTTCAGAATATCCGAGAAGCAGCATTGGGGCGTCTGGAGATGCAAATGTGACCATGTGGGGACACAGTCCAAAGGCAACCCTTGAGGTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 90 bp GCACTCAGGTCTAGGAGAGTGGTCTTCACAACTCTACCTCAAGGGTaGCCTTTGGACTGTGTCCCCACATGGTCACATTTGCATCTCCAG +
Preference number: 2 (lower is better)
Translates to: ALRSRRVVFTTLPQG*PLDCVPTWSHLHLQ
Trigger: CTGGAGATGCAAATGTGACCATGTGGGGACACAGTCCAAAGGCAACCCTTGAGGTAGAGTTGTGAAGACCACTCTCCTAGACCTGAGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 90 bp AGAATGAGTTCCAGGTGCCCAGTACAGCTAAGCAAAGCACCGGTATaGGAAATCCTGGGGTTGGTTAGTGAAAGCTGGGAGGAGCCTGTG +
Preference number: 2 (lower is better)
Translates to: RMSSRCPVQLSKAPV*EILGLVSESWEEPV
Trigger: CACAGGCTCCTCCCAGCTTTCACTAACCAACCCCAGGATTTCCAATACCGGTGCTTTGCTTAGCTGTACTGGGCACCTGGAACTCATTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGTGCCCTCAGCCACTCTaGTGTGATGGAGCCAATCCA +
Preference number: 2 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTECPQPL*CDGANP
Trigger: TGGATTGGCTCCATCACATCAGAGTGGCTGAGGGCA...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
3UTR-3UTR TCA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGAAAAGCATCCAACTGTaGGACAAGGCCTCAGTTTCC +
Preference number: 2 (lower is better)
Translates to: RSHPREGQILGLKSRLVWKSIQL*DKASVS
Trigger: GGAAACTGAGGCCTTGTCTCACAGTTGGATGCTTTT...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGTCTGATTTCTGGTTATaGGGCCAAAGATCCCAAAGG +
Preference number: 2 (lower is better)
Translates to: GETGQMTASVTPSPTLGRSDFWL*GQRSQR
Trigger: CCTTTGGGATCTTTGGCCTCATAACCAGAAATCAGA...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAAGGACTGCTGTATGTGTaGGAGGTAGTCTTTGGAAGA +
Preference number: 2 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQGLLYV*EVVFGR
Trigger: TCTTCCAAAGACTACCTCTCACACATACAGCAGTCC...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTCCCATCAGACCATACTaGCAGGCCCTGGGAAGTGCC +
Preference number: 2 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCPIRPY*QALGSA
Trigger: GGCACTTCCCAGGGCCTGGCAGTATGGTCTGATGGG...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTACCGGAATACATGGGCTaGCAGGTCAGATGTGGGCCA +
Preference number: 2 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLPEYMG*QVRCGP
Trigger: TGGCCCACATCTGACCTGGCAGCCCATGTATTCCGG...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCTGCTCATTTCACAGATaGAGTACCTGCAACCCAGAG +
Preference number: 2 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCCSFHR*STCNPE
Trigger: CTCTGGGTTGCAGGTACTGCATCTGTGAAATGAGCA...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACAACCTCTGCCAGGGCCTaGCCAGTACACATTAGGAGC +
Preference number: 2 (lower is better)
Translates to: LNTLLAISPDTPTAISPTTSARA*PVHIRS
Trigger: GCTCCTAATGTGTACTGGGCAGGCCCTGGCAGAGGT...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR-3UTR CCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCATGCACCCAGGGCAGTaGAGGACTAATCAATCCCTG +
Preference number: 2 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGMHPGQ*RTNQSL
Trigger: CAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCAT...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGCTGCCTGCCTTATGTTaGTCCCATGCATCAGATGGA +
Preference number: 2 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMLPALC*SHASDG
Trigger: TCCATCTGATGCATGGGACCAACATAAGGCAGGCAG...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGAGGTTTCTGAAGGCATaGTACAGAAGGTGCCAGCAG +
Preference number: 2 (lower is better)
Translates to: VAQGSGALESSKWPLLNLRFLKA*YRRCQQ
Trigger: CTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCT...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCCAGATGTGGGCCACATaGGAAGTCCCAGCTCTATTC +
Preference number: 2 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGQMWAT*EVPALF
Trigger: GAATAGAGCTGGGACTTCCCATGTGGCCCACATCTG...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGAATGACCGGAATACATaGGCTGCCAGGTCAGATGTG +
Preference number: 2 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMNDRNT*AARSDV
Trigger: CACATCTGACCTGGCAGCCCATGTATTCCGGTCATT...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGTCTCTGATAGTCAAATaGACACCAATGGCAGCCTCA +
Preference number: 2 (lower is better)
Translates to: GETGQMTASVTPSPTLGRSLIVK*TPMAAS
Trigger: TGAGGCTGCCATTGGTGTCCATTTGACTATCAGAGA...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACATGGGGGAGAAATGGGTaGGCTCAGCAGGACAGGTCT +
Preference number: 2 (lower is better)
Translates to: LNTLLAISPDTPTAISPTWGRNG*AQQDRS
Trigger: AGACCTGTCCTGCTGAGCCCACCCATTTCTCCCCCA...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR-3UTR TCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGATGCCCTCAGCCACTCTaGTGTGATGGAGCCAATCCA +
Preference number: 2 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRCPQPL*CDGANP
Trigger: TGGATTGGCTCCATCACATCAGAGTGGCTGAGGGCA...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
3UTR-3UTR TCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTTGGTCACTGTCATGTaGCCTCAGGCAGTACATACC +
Preference number: 2 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPLVTVM*PQAVHT
Trigger: GGTATGTACTGCCTGAGGTCACATGACAGTGACCAA...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCCACTTAGGCTGGGTATaGCTCCAGCAATATAGGCTC +
Preference number: 2 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPHLGWV*LQQYRL
Trigger: GAGCCTATATTGCTGGAGTCATACCCAGCCTAAGTG...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTCAAGGAAGGGATCCCTaGTGTGCCAACAGATGGATT +
Preference number: 2 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCQGRDP*CANRWI
Trigger: AATCCATCTGTTGGCACATCAGGGATCCCTTCCTTG...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCGCGACCCAGGAACTGTaGAGCAAAGACCTCCAGACC +
Preference number: 2 (lower is better)
Translates to: DIQMPACTFHLTKSKEVAATQEL*SKDLQT
Trigger: GGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGC...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTCCAGTCCTCTTGGCTTaGACCTTTTCCTCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTPVLLA*TFSSAE
Trigger: CTCTGCTGAGGAAAAGGTCCAAGCCAAGAGGACTGG...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGGAAAAGAATCGAAGGTaGATAGGGAAAGACATGCTG +
Preference number: 2 (lower is better)
Translates to: GETGQMTASVTPSPTLGREKNRR*IGKDML
Trigger: CAGCATGTCTTTCCCTATCCACCTTCGATTCTTTTC...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 90 bp TGCTCAGAGAACAGGGTTTGTGCTGAGCTTGAGATAAGGCTTCTCTaGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGAC +
Preference number: 2 (lower is better)
Translates to: CSENRVCAELEIRLL*LSLSIKETARWASD
Trigger: GTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAGCCTTATCTCAAGCTCAGCACAAACCCTGTTCTCTGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGCATGCACATTCCACTTaGCTAAGAGTAAAGAGGTTG +
Preference number: 2 (lower is better)
Translates to: RSHPREGQILGLKSRLVWHAHST*LRVKRL
Trigger: CAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATG...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTAACCCTGAGATGCTGCTaGAGACAGCAAGAGCCAAAG +
Preference number: 2 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLTLRCC*RQQEPK
Trigger: CTTTGGCTCTTGCTGTCTTCAGCAGCATCTCAGGGT...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTAGCTGCAGCAGAGGATaGTGCCTATTGGACCATACT +
Preference number: 2 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTSCSRG*CLLDHT
Trigger: AGTATGGTCCAATAGGCAGCATCCTCTGCTGCAGCT...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCCATAGGGAAAGGAGTTaGCCAAGGTCCCACTGCAGG +
Preference number: 2 (lower is better)
Translates to: DIQMPACTFHLTKSKEVAHRERS*PRSHCR
Trigger: CCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATG...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCGTACATACCTTCTCTTaGTCTCCATGCCTGGCGAAT +
Preference number: 2 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGVHTFS*SPCLAN
Trigger: ATTCGCCAGGCATGGAGAGCAAGAGAAGGTATGTAC...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGAATTCTTCCAGCCTCTaGCCATTTCCACGTTGCAAT +
Preference number: 2 (lower is better)
Translates to: VAQGSGALESSKWPLLNLNSSSL*PFPRCN
Trigger: ATTGCAACGTGGAAATGGGCAGAGGCTGGAAGAATT...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCAATGCCATAAGAACCTaGGCTCTGGAAAGTGCCATC +
Preference number: 2 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGNAIRT*ALESAI
Trigger: GATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATT...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAAATGCCATAAGAACCTaGGCTCTGGAAAGTGCCATC +
Preference number: 2 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRANAIRT*ALESAI
Trigger: GATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATT...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
3UTR-3UTR CCA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTAGTTGGCGTTGGCCCTaGACTCAGAAGAGCCAGCTT +
Preference number: 2 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCSWRWP*TQKSQL
Trigger: AAGCTGGCTCTTCTGAGTCCAGGGCCAACGCCAACT...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGCACTGCACTCTCTTCTaGTGCAACATCCACAAGCTC +
Preference number: 2 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMHCTLF*CNIHKL
Trigger: GAGCTTGTGGATGTTGCACCAGAAGAGAGTGCAGTG...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGTGGAGCTTGAAGAAGTaGATTGTTTGCACCGCCTGG +
Preference number: 2 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMWSLKK*IVCTAW
Trigger: CCAGGCGGTGCAAACAATCCACTTCTTCAAGCTCCA...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGAGCAGCACTCTAATTTaGGCACCACAATCTATATTC +
Preference number: 2 (lower is better)
Translates to: GETGQMTASVTPSPTLGRSSTLI*APQSIF
Trigger: GAATATAGATTGTGGTGCCCAAATTAGAGTGCTGCT...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGTGGAGGTCAGCAATCTaGAATCAGTTTCACAGGGCT +
Preference number: 2 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMWRSAI*NQFHRA
Trigger: AGCCCTGTGAAACTGATTTCAGATTGCTGACCTCCA...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTCTCTCAATACTTTACTaGCCATATCCCCCGATACCC +
Preference number: 2 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTLSILY*PYPPIP
Trigger: GGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAG...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACATCAGGTCTAGGAGAGTaGTCTTCACAACTCTACCTC +
Preference number: 2 (lower is better)
Translates to: LLLLSLSIKETARWASDTSGLGE*SSQLYL
Trigger: GAGGTAGAGTTGTGAAGACCACTCTCCTAGACCTGA...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACATTAGACACATCCATCTaGTGCCTCATCCCAGAACCT +
Preference number: 2 (lower is better)
Translates to: LLLLSLSIKETARWASDTLDTSI*CLIPEP
Trigger: AGGTTCTGGGATGAGGCACCAGATGGATGTGTCTAA...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGGAAGATACTACTACATaGGGGAGAAATGGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMEDTTT*GRNGWA
Trigger: AGCCCACCCATTTCTCCCCCATGTAGTAGTATCTTC...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR CAA 90 bp TGGCTTTCAGTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATaGAGCTGTGGAGTGCCTTCAACAAGGGTTTTTAGACACATCCAT +
Preference number: 2 (lower is better)
Translates to: WLSVRAKRVVSNGQL*SCGVPSTRVFRHIH
Trigger: ATGGATGTGTCTAAAAACCCTTGTTGAAGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCACTGAAAGCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGATTGAATATAAGTCTTaGCATGATCCACCCCTTCCA +
Preference number: 2 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMIEYKS*HDPPLP
Trigger: TGGAAGGGGTGGATCATGGCAAGACTTATATTCAAT...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTTTCGCTGCCCTCTCCTaGCCCACACCTAGCGCTCTG +
Preference number: 2 (lower is better)
Translates to: EALVALVLNNLYKGDYYSFAALS*PTPSAL
Trigger: CAGAGCGCTAGGTGTGGGGCAGGAGAGGGCAGCGAA...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAAATGCCATAAGAACCTaGGCTCTGGAAAGTGCCATC +
Preference number: 2 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRNAIRT*ALESAI
Trigger: GATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATT...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
3UTR CAA 90 bp AAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATaGCATCACTCTGACCTCTGCTTCCATTGTTACATACATTTTCTT +
Preference number: 2 (lower is better)
Translates to: KRLSAFLGSWLFLQQ*HHSDLCFHCYIHFL
Trigger: AAGAAAATGTATGTAACAATGGAAGCAGAGGTCAGAGTGATGCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR TCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTGGCCCTAAGGGAGGCTaGGGTACTGAGCTCTTGGCT +
Preference number: 2 (lower is better)
Translates to: EALVALVLNNLYKGDYYSGPKGG*GTELLA
Trigger: AGCCAAGAGCTCAGTACCTCAGCCTCCCTTAGGGCC...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGATTCAGATGCCAGCATaGACATTCCACTTGACTAAG +
Preference number: 2 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMIQMPA*TFHLTK
Trigger: CTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAAT...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTGGGAGATCGCGCCACTaGACTCCAGTCTGGGCAACA +
Preference number: 2 (lower is better)
Translates to: EALVALVLNNLYKGDYYSGRSRH*TPVWAT
Trigger: TGTTGCCCAGACTGGAGTGCAGTGGCGCGATCTCCC...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTTCCCTGGGCCCACTGTaGTCCTGGCCATCTCACATC +
Preference number: 2 (lower is better)
Translates to: EALVALVLNNLYKGDYYSSLGPL*SWPSHI
Trigger: GATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGA...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTGGGATGGACGCAAGCTaGCTGTCCCAGAGTGTGGAG +
Preference number: 2 (lower is better)
Translates to: EALVALVLNNLYKGDYYSGMDAS*LSQSVE
Trigger: CTCCACACTCTGGGACAGCCAGCTTGCGTCCATCCC...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 90 bp GACTACAACTACCATCCCAGCCCCCAGTTCAAACATTTGTGTTCATaGCTCTTCGCCCTGATGGACTGTATGCTAAGAAAGAATTTGCAC +
Preference number: 2 (lower is better)
Translates to: DYNYHPSPQFKHLCS*LFALMDCMLRKNLH
Trigger: GTGCAAATTCTTTCTTAGCATACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGGATGGTAGTTGTAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTCATGAGGCCCATGTCTaGCCTCCCAGTAGCTCTCCA +
Preference number: 2 (lower is better)
Translates to: EALVALVLNNLYKGDYYSHEAHV*PPSSSP
Trigger: TGGAGAGCTACTGGGAGGCCAGACATGGGCCTCATG...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 90 bp GAAGATAGAGGTAGTATCTCCCTCCAGAGCAAAAGGCAGATTTTATaGTCCCGTATACTAAAGATAACATCTCCCACCTGGGCAGGTTTG +
Preference number: 2 (lower is better)
Translates to: EDRGSISLQSKRQIL*SRILKITSPTWAGL
Trigger: CAAACCTGCCCAGGTGGGAGATGTTATCTTTAGTATACGGGACAATAAAATCTGCCTTTTGCTCTGGAGGGAGATACTACCTCTATCTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTCAGGGCAGAAGGTCATaGGGAGGAGATCAGGTCACT +
Preference number: 2 (lower is better)
Translates to: EALVALVLNNLYKGDYYSQGRRS*GGDQVT
Trigger: AGTGACCTGATCTCCTCCTCATGACCTTCTGCCCTG...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR GCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTAGCTTACATGGGCTCTaGGCTCCCATGACTTGGAGG +
Preference number: 2 (lower is better)
Translates to: EALVALVLNNLYKGDYYSSLHGL*APMTWR
Trigger: CCTCCAAGTCATGGGAGCGCAGAGCCCATGTAAGCT...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTCTTGAGTCTTCGAAGTaGCCATTGCTCAACTTGAAT +
Preference number: 2 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCLESSK*PLLNLN
Trigger: ATTCAAGTTGAGCAATGGCCACTTCGAAGACTCAAG...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CCA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTTTAAAATCAAGGTATTaGCAGGACTGCATTCTTCTT +
Preference number: 2 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCLKSRY*QDCILL
Trigger: AAGAAGAATGCAGTCCTGCCAATACCTTGATTTTAA...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 90 bp TTATTGTCCCGTATACTAAAGATAACATCTCCCACCTGGGCAGGTTaGCTTGCAGCTTATTATAAAAGACGTGGGTCCCCTAAATTCAGC +
Preference number: 2 (lower is better)
Translates to: LLSRILKITSPTWAG*LAAYYKRRGSPKFS
Trigger: GCTGAATTTAGGGGACCCACGTCTTTTATAATAAGCTGCAAGCAAACCTGCCCAGGTGGGAGATGTTATCTTTAGTATACGGGACAATAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 90 bp GTATTGAGAGACAATTCCCCATGGTTCTCTCCTATTTCTGCACACTaGCCAGTAGAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTAC +
Preference number: 2 (lower is better)
Translates to: VLRDNSPWFSPISAH*PVEALVALVLNNLY
Trigger: GTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTCTACTGGCAAGTGTGCAGAAATAGGAGAGAACCATGGGGAATTGTCTCTCAATAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTGGGATCAGGTGCACTTaGGTCTTCGAAGTGGCCATT +
Preference number: 2 (lower is better)
Translates to: EALVALVLNNLYKGDYYSGIRCT*VFEVAI
Trigger: AATGGCCACTTCGAAGACTCAAGTGCACCTGATCCC...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTCTGCGTGGACACCTATaGTTATGGACATGGACCCAG +
Preference number: 2 (lower is better)
Translates to: EALVALVLNNLYKGDYYSLRGHL*LWTWTQ
Trigger: CTGGGTCCATGTCCATAATCATAGGTGTCCACGCAG...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTACTCTCTGTCTTCCTTaGTTTCAGGCTGCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: EALVALVLNNLYKGDYYSTLCLP*FQAAPG
Trigger: CCCTGGAGCAGCCTGAAACCAAGGAAGACAGAGAGT...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR TCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTCTGTTCCAGAATATCTaGTGCCACTGCTACAGACCC +
Preference number: 2 (lower is better)
Translates to: EALVALVLNNLYKGDYYSLFQNI*CHCYRP
Trigger: GGGTCTGTAGCAGTGGCATCAGATATTCTGGAACAG...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTATTAAAATCAAGGTATTaGCAGGACTGCATTCTTCTT +
Preference number: 2 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLLKSRY*QDCILL
Trigger: AAGAAGAATGCAGTCCTGCCAATACCTTGATTTTAA...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR GCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTCATTCTGCCTGCAAGTaGTCCTTGACATATGCTGGT +
Preference number: 2 (lower is better)
Translates to: EALVALVLNNLYKGDYYSHSACK*SLTYAG
Trigger: ACCAGCATATGTCAAGGAGCACTTGCAGGCAGAATG...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTCGGTATTGGAAATCCTaGGGTTGGTTAGTGAAAGCT +
Preference number: 2 (lower is better)
Translates to: EALVALVLNNLYKGDYYSRYWKS*GWLVKA
Trigger: AGCTTTCACTAACCAACCCCAGGATTTCCAATACCG...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 72 bp GGGGAGCTGGCTCAGCAGGCTGAGGGAGATGGCTCCTaGTCCGCAGCCCACCTCCAGAATGAGGGGGCTGCC +
Preference number: 3 (lower is better)
Translates to: GELAQQAEGDGS*SAAHLQNEGAA
Trigger: GGCAGCCCCCTCATTCTGGAGGTGGGCTGCGGATCAGGAGCCATCTCCCTCAGCCTGCTGAGCCAGCTCCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR CCA 72 bp ACAGGTCTGGCGCCTGCCCTTCTGGGCTGCTTGGGCTaGCGAGGTGAGGGTCCTGTGCTGACCTCTGCCAGG +
Preference number: 3 (lower is better)
Translates to: TGLAPALLGCLG*RGEGPVLTSAR
Trigger: CCTGGCAGAGGTCAGCACAGGACCCTCACCTCGCCAGCCCAAGCAGCCCAGAAGGGCAGGCGCCAGACCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR GCA 72 bp TGGGCTCAACGTCCAGGGCCCAATCAAGCCAGTGGCTaGAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGGC +
Preference number: 3 (lower is better)
Translates to: WAQRPGPNQASG*RLEAPPASPLG
Trigger: GCCAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCCCTGGACGTTGAGCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp GGCCCACCCCACTGTGACTGGCAGAGTCTGAAGGGCTaGGCTGGCCTGGGTGTGGCCCCAGCTACGAAGATC +
Preference number: 3 (lower is better)
Translates to: GPPHCDWQSLKG*AGLGVAPATKI
Trigger: GATCTTCGTAGCTGGGGCCACACCCAGGCCAGCCCAGCCCTTCAGACTCTGCCAGTCACAGTGGGGTGGGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 72 bp ACGTCCAGGGCCCAATCAAGCCAGTGGCTGCAGGCTTaGGGCCCCGCCTGCCAGTCCTCTTGGCTTGGACCT +
Preference number: 3 (lower is better)
Translates to: TSRAQSSQWLQA*GPACQSSWLGP
Trigger: AGGTCCAAGCCAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCCCTGGACGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 72 bp TGCCATCCACCTCCCCTCTGGTCAGGCTGGCGGCACTaGCAAGGCATCCACAGGGCAGCCATGCTATGGCCC +
Preference number: 3 (lower is better)
Translates to: CHPPPLWSGWRH*QGIHRAAMLWP
Trigger: GGGCCATAGCATGGCTGCCCTGTGGATGCCTTGTCAGTGCCGCCAGCCTGACCAGAGGGGAGGTGGATGGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR GCA 72 bp TTGTGCCCGAGGCCGGCTCCTGCTTGTGGCCCCAGCTaGCCCGACAGTGTCACTCTCCAACACTGCACTCTC +
Preference number: 3 (lower is better)
Translates to: LCPRPAPACGPS*PDSVTLQHCTL
Trigger: GAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAGCAGGAGCCGGCCTCGGGCACAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp ACAGGGCAGCCATGCTATGGCCCAGACCTCCGGATATaGAGGAACCGGGGCCTCCCACAGAAGTCCCTGCGC +
Preference number: 3 (lower is better)
Translates to: TGQPCYGPDLRI*RNRGLPQKSLR
Trigger: GCGCAGGGACTTCTGTGGGAGGCCCCGGTTCCTGCATATCCGGAGGTCTGGGCCATAGCATGGCTGCCCTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR CCA 72 bp GCTCTGCCTGGCCCCTTTGCTGTGGGCGTGAAAATCTaGCACCCGGGCCGACAGGGAGAGAGCTCAGTCTGC +
Preference number: 3 (lower is better)
Translates to: ALPGPFAVGVKI*HPGRQGESSVC
Trigger: GCAGACTGAGCTCTCTCCCTGTCGGCCCGGGTGCCAGATTTTCACGCCCACAGCAAAGGGGCCAGGCAGAGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp GCCTCCTCTGCCCTTGGAGGGCGCACAGGACCTTGTTaGGCCTTCGGAGGAGAAGTAGGGTTGGGGGCAGGT +
Preference number: 3 (lower is better)
Translates to: ASSALGGRTGPC*AFGGEVGLGAG
Trigger: ACCTGCCCCCAACCCTACTTCTCCTCCGAAGGCCCAACAAGGTCCTGTGCGCCCTCCAAGGGCAGAGGAGGC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGGGCAGAAGGAAACCCTaGCCCCAGTGCTACCTGGGA +
Preference number: 3 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLGRRKP*PQCYLG
Trigger: TCCCAGGTAGCACTGGGGCAAGGGTTTCCTTCTGCC...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCAGGAGCCTTGCCCTGGTaGTGCACCCCCTTCGCCCTC +
Preference number: 3 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPGALPW*CTPFAL
Trigger: GAGGGCGAAGGGGGTGCACAACCAGGGCAAGGCTCC...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp GCTGCCTATTGGACCATACTGCCCATCAGACCATACTaGCAGGCCCTGGGAAGTGCCAGGGTGGCAGGGGGC +
Preference number: 3 (lower is better)
Translates to: AAYWTILPIRPY*QALGSARVAGG
Trigger: GCCCCCTGCCACCCTGGCACTTCCCAGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp CGAGGTGAGGGTCCTGTGCTGACCTCTGCCAGGGCCTaGCCAGTACACATTAGGAGCAGAGGAGCCTGCTGG +
Preference number: 3 (lower is better)
Translates to: RGEGPVLTSARA*PVHIRSRGACW
Trigger: CCAGCAGGCTCCTCTGCTCCTAATGTGTACTGGGCAGGCCCTGGCAGAGGTCAGCACAGGACCCTCACCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR GCA 72 bp GCTGGCGGCACTGACAAGGCATCCACAGGGCAGCCATaGTATGGCCCAGACCTCCGGATATGCAGGAACCGG +
Preference number: 3 (lower is better)
Translates to: AGGTDKASTGQP*YGPDLRICRNR
Trigger: CCGGTTCCTGCATATCCGGAGGTCTGGGCCATAGCATGGCTGCCCTGTGGATGCCTTGTCAGTGCCGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR-3UTR CAA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCACAGACCCTGGACAAGTaGCAGCCTCCTGCCCCAGCC +
Preference number: 3 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPQTLDK*QPPAPA
Trigger: GGCTGGGGCAGGAGGCTGCAACTTGTCCAGGGTCTG...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp CTGGCTGAAGCCAAGAGCTCCAGGAAACCTGGCGCCTaGTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTG +
Preference number: 3 (lower is better)
Translates to: LAEAKSSRKPGA*SYCRQGQPVLL
Trigger: CAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGCAGGCGCCAGGTTTCCTGGAGCTCTTGGCTTCAGCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp GATGCAGTACCTGCAACCCAGAGAGTACAGGGCCCCTaGTCATCCTCACACACCCAAGGGGTCCTGGGCCAG +
Preference number: 3 (lower is better)
Translates to: DAVPATQRVQGP*SSSHTQGVLGQ
Trigger: CTGGCCCAGGACCCCTTGGGTGTGTGAGGATGAGCAGGGGCCCTGTACTCTCTGGGTTGCAGGTACTGCATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp CAGGCAAAGGTCTGTGAGCATGGGGGACTAAGGAAGTaGGGAGCCTTGCCCTGGTTGTGCACCCCCTTCGCC +
Preference number: 3 (lower is better)
Translates to: QAKVCEHGGLRK*GALPWLCTPFA
Trigger: GGCGAAGGGGGTGCACAACCAGGGCAAGGCTCCCCACTTCCTTAGTCCCCCATGCTCACAGACCTTTGCCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp ATGATTATGGACATGGACCCAGTTGGCCAGGTGCAGTaGCTCACGGGACCCGGTGCTCAAGGCCCACGCCCA +
Preference number: 3 (lower is better)
Translates to: MIMDMDPVGQVQ*LTGPGAQGPRP
Trigger: TGGGCGTGGGCCTTGAGCACCGGGTCCCGTGAGCCACTGCACCTGGCCAACTGGGTCCATGTCCATAATCAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTCCAGTGGCTGCAGGCTaGAGGCCCCGCCTGCCAGTC +
Preference number: 3 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPPVAAG*RPRLPV
Trigger: GACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGG...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCACAAGACCTCAGGGGCTaGCACAGCCTGGACTCCATC +
Preference number: 3 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPQDLRG*HSLDSI
Trigger: GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTG...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGCTCCTGGTGTGGCTGTaGCGCAGGGATCAGGTGCAC +
Preference number: 3 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWLLVWL*RRDQVH
Trigger: GTGCACCTGATCCCTGCGCAACAGCCACACCAGGAG...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 72 bp CTCTATGCCAGGACCCATGGTATCCAAGGCCAGGAGTaGGGACTCACGTGCCTTCCTCCACACTGCACCCCC +
Preference number: 3 (lower is better)
Translates to: LYARTHGIQGQE*GLTCLPPHCTP
Trigger: GGGGGTGCAGTGTGGAGGAAGGCACGTGAGTCCTCACTCCTGGCCTTGGATACCATGGGTCCTGGCATAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 72 bp GGCCTTCGGAGGAGAAGTAGGGTTGGGGGCAGGTGGTaGCTCTGGCAGAGGCTCTGTTTCCTCTTCCAGCTC +
Preference number: 3 (lower is better)
Translates to: GLRRRSRVGGRW*LWQRLCFLFQL
Trigger: GAGCTGGAAGAGGAAACAGAGCCTCTGCCAGAGTCACCACCTGCCCCCAACCCTACTTCTCCTCCGAAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp GGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTaGACTCTCTTCTGGTGCAACATCCACAAGCTCGCC +
Preference number: 3 (lower is better)
Translates to: GPSCPDSVTLQH*TLFWCNIHKLA
Trigger: GGCGAGCTTGTGGATGTTGCACCAGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp GGCCATAGTGAGGAGAGGCTGAGGGGAGATGTAGGCTaGCAGGCTACCAGCCTGCTGGCTCCATCTCTAGAC +
Preference number: 3 (lower is better)
Translates to: GHSEERLRGDVG*QATSLLAPSLD
Trigger: GTCTAGAGATGGAGCCAGCAGGCTGGTAGCCTGGCAGCCTACATCTCCCCTCAGCCTCTCCTCACTATGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp AGCCTCACACTGACTTCCAGGAACAGCAGAGGGACTTaGACGCCTCTCCAGGCAGGCAGGCCTGTTCCTGGA +
Preference number: 3 (lower is better)
Translates to: SLTLTSRNSRGT*TPLQAGRPVPG
Trigger: TCCAGGAACAGGCCTGCCTGCCTGGAGAGGCGTCCAAGTCCCTCTGCTGTTCCTGGAAGTCAGTGTGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp AGCATGTGGCCCAGATTGATTTGCTGTGACAGATGCTaGGTGGGAGGTGCCGGGAGCCTCAGGCTATGGGGG +
Preference number: 3 (lower is better)
Translates to: SMWPRLICCDRC*VGGAGSLRLWG
Trigger: CCCCCATAGCCTGAGGCTCCCGGCACCTCCCACCCAGCATCTGTCACAGCAAATCAATCTGGGCCACATGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp GAGCCTGGAGCTCCCCCATCCAAGGGAGGCCCTGCGTaGACACCTATGATTATGGACATGGACCCAGTTGGC +
Preference number: 3 (lower is better)
Translates to: EPGAPPSKGGPA*TPMIMDMDPVG
Trigger: GCCAACTGGGTCCATGTCCATAATCATAGGTGTCCACGCAGGGCCTCCCTTGGATGGGGGAGCTCCAGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCGGCTTGGCCAGGGAATaGTGTACGCATGCACCCAGG +
Preference number: 3 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGGLARE*CTHAPR
Trigger: CCTGGGTGCATGCGTACACAATTCCCTGGCCAAGCC...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGATGAGACAGCCTGGTTaGCCATGTTTCTTAGGACCC +
Preference number: 3 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLMRQPG*PCFLGP
Trigger: GGGTCCTAAGAAACATGGCAAACCAGGCTGTCTCAT...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCTTTCTGGGCAGAAAGTaGTGCCCGAGGCCGGCTCCT +
Preference number: 3 (lower is better)
Translates to: SLDSISSMSSSHSACKCSFLGRK*CPRPAP
Trigger: AGGAGCCGGCCTCGGGCACAACTTTCTGCCCAGAAA...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCCAAGACCTCAGGGGCTaGCACAGCCTGGACTCCATC +
Preference number: 3 (lower is better)
Translates to: SLDSISSMSSSHSACKCSQDLRG*HSLDSI
Trigger: GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTG...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCATGGCCATTGCTCAACTaGAATGGCTGCCTGGGTCGG +
Preference number: 3 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPWPLLN*NGCLGR
Trigger: CCGACCCAGGCAGCCATTCAAGTTGAGCAATGGCCA...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 72 bp CTCCCCCATCCAAGGGAGGCCCTGCGTGGACACCTATaGTTATGGACATGGACCCAGTTGGCCAGGTGCAGT +
Preference number: 3 (lower is better)
Translates to: LPHPREALRGHL*LWTWTQLARCS
Trigger: ACTGCACCTGGCCAACTGGGTCCATGTCCATAATCATAGGTGTCCACGCAGGGCCTCCCTTGGATGGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 72 bp CCCACCCTTAGCCCACCAAATCTTCTCCGGGGCCCCTaGGTCAGGTGCACAGTCAGGGTCCTAATGTCCTTC +
Preference number: 3 (lower is better)
Translates to: PTLSPPNLLRGP*VRCTVRVLMSF
Trigger: GAAGGACATTAGGACCCTGACTGTGCACCTGACTCAGGGGCCCCGGAGAAGATTTGGTGGGCTAAGGGTGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp AGAGTCAAGCTGCACATTTTTCTGGGCAGAAAGTTGTaGCCGAGGCCGGCTCCTGCTTGTGGCCCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: RVKLHIFLGRKL*PRPAPACGPSC
Trigger: GCAGCTGGGGCCACAAGCAGGAGCCGGCCTCGGGCACAACTTTCTGCCCAGAAAAATGTGCAGCTTGACTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp TCCAGAGCCTGGAGCTCCCCCATCCAAGGGAGGCCCTaGGTGGACACCTATGATTATGGACATGGACCCAGT +
Preference number: 3 (lower is better)
Translates to: SRAWSSPIQGRP*VDTYDYGHGPS
Trigger: ACTGGGTCCATGTCCATAATCATAGGTGTCCACGCAGGGCCTCCCTTGGATGGGGGAGCTCCAGGCTCTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp GCTGGGAGGAGCCTGTGGTTAGTTCCCAGGCGGGTTTaGTGGGAGAATCACCAGCCTCCATTTCCCAGAGGT +
Preference number: 3 (lower is better)
Translates to: AGRSLWLVPRRV*WENHQPPFPRG
Trigger: ACCTCTGGGAAATGGAGGCTGGTGATTCTCCCAGCAAACCCGCCTGGGAACTAACCACAGGCTCCTCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp GAACTGCTTGGACCCCACCAGACTGTGATGGGGGCCTaGCTGAATAGTGCCCATTCCTTGTGCCTGGCACAG +
Preference number: 3 (lower is better)
Translates to: ELLGPHQTVMGA*LNSAHSLCLAQ
Trigger: CTGTGCCAGGCACAAGGAATGGGCACTATTCAGGCAGGCCCCCATCACAGTCTGGTGGGGTCCAAGCAGTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp ATCCCTGCCTGCCTTATGTTGGTCCCATGCATCAGATaGACGCCTGAGGGCACTGGGTCCTTCCTCCCTGTG +
Preference number: 3 (lower is better)
Translates to: IPACLMLVPCIR*TPEGTGSFLPV
Trigger: CACAGGGAGGAAGGACCCAGTGCCCTCAGGCGTCCATCTGATGCATGGGACCAACATAAGGCAGGCAGGGAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp CATCAAACAGGGACTCCTACACTCCTGTCTATGCTCTaGGCTCTGGCTGAAGGAGGCTGCACGGGCAGTGGG +
Preference number: 3 (lower is better)
Translates to: HQTGTPTLLSML*ALAEGGCTGSG
Trigger: CCCACTGCCCGTGCAGCCTCCTTCAGCCAGAGCCCAGAGCATAGACAGGAGTGTAGGAGTCCCTGTTTGATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp ATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATaGCTTCCCATCCCTAATGACCGGAATACATGGGCT +
Preference number: 3 (lower is better)
Translates to: MAAWVGQKARSS*LPIPNDRNTWA
Trigger: AGCCCATGTATTCCGGTCATTAGGGATGGGAAGCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp AGGAGATCAGGTCACTGTCCTAGCCAGGACTCTGGCTaGGGGCTGGCTGAAGCCAAGAGCTCCAGGAAACCT +
Preference number: 3 (lower is better)
Translates to: RRSGHCPSQDSG*GLAEAKSSRKP
Trigger: AGGTTTCCTGGAGCTCTTGGCTTCAGCCAGCCCCCAGCCAGAGTCCTGGCTAGGACAGTGACCTGATCTCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp CACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTaGCAGCCACTTTCGCTGCCCTCTCCTGCCCCACAC +
Preference number: 3 (lower is better)
Translates to: HPYPEYIRVWVQ*QPLSLPSPAPH
Trigger: GTGTGGGGCAGGAGAGGGCAGCGAAAGTGGCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp CCTGCCCTGGAGTCCCAGCAGTATCAATCCCAGGTGTaGAAACCTCTTCCTTTGCGTGGCTCCCCTGCGTTG +
Preference number: 3 (lower is better)
Translates to: PALESQQYQSQV*KPLPLRGSPAL
Trigger: CAACGCAGGGGAGCCACGCAAAGGAAGAGGTTTCCACACCTGGGATTGATACTGCTGGGACTCCAGGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAACAGCCCTGGAAACCCTaGCTCCTGCTCCAAGGGTCC +
Preference number: 3 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQQPWKP*LLLQGS
Trigger: GGACCCTTGGAGCAGGAGCAAGGGTTTCCAGGGCTG...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCAAGCAGGCAGTCATCCTaGAGCCAAAACGCAGATGAG +
Preference number: 3 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPSRQSS*SQNADE
Trigger: CTCATCTGCGTTTTGGCTCAAGGATGACTGCCTGCT...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTCTAAGAGTAAAGAGGTaGCCAGTTGGCGTTGGCCCT +
Preference number: 3 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSLRVKR*PVGVGP
Trigger: AGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAG...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTGCCTGCAAGTGCTCCTaGACATATGCTGGTGGTGGT +
Preference number: 3 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSACKCS*TYAGGG
Trigger: ACCACCACCAGCATATGTCAAGGAGCACTTGCAGGC...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCATATAGGACCCTCCACTaGGTATCATCTCCCTGGTGC +
Preference number: 3 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPYRTLH*VSSPWC
Trigger: GCACCAGGGAGATGATACCAAGTGGAGGGTCCTATA...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 72 bp GTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTaGATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCC +
Preference number: 3 (lower is better)
Translates to: VHLSLRSGHCST*MAAWVGQKARS
Trigger: GGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 72 bp CTGCATTTGGCCTCGGCAGCCTGCTCACGCCTCTCCTaGCTGGGATGTCAGAGGACTAGGTTCAAACTCCAG +
Preference number: 3 (lower is better)
Translates to: LHLASAACSRLS*LGCQRTRFKLQ
Trigger: CTGGAGTTTGAACCTAGTCCTCTGACATCCCAGTCAGGAGAGGCGTGAGCAGGCTGCCGAGGCCAAATGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 72 bp CAGGAAAGGACTCGTCCCAGATGCTGTGTCCTCGCCTaGCCTTGTATTCTGCCCCACCTAGTGGCCCTAAGG +
Preference number: 3 (lower is better)
Translates to: QERTRPRCCVLA*PCILPHLVALR
Trigger: CCTTAGGGCCACTAGGTGGGGCAGAATACAAGGTCAGGCGAGGACACAGCATCTGGGACGAGTCCTTTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp CAGCTGCAGCAGAGGATGCTGCCTATTGGACCATACTaGCCATCAGACCATACTGCCAGGCCCTGGGAAGTG +
Preference number: 3 (lower is better)
Translates to: QLQQRMLPIGPY*PSDHTARPWEV
Trigger: CACTTCCCAGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCTGCTGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp TCCCTGTGTCTGCCCTCCGAGGAAGGCAAGGAAAAATaGCACAATGTGCCAAGCCAGGCACATCCCATGGGC +
Preference number: 3 (lower is better)
Translates to: SLCLPSEEGKEK*HNVPSQAHPMG
Trigger: GCCCATGGGATGTGCCTGGCTTGGCACATTGTGGCATTTTTCCTTGCCTTCCTCGGAGGGCAGACACAGGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp CTGCCTTGTATCCCTGCCTGCCTTATGTTGGTCCCATaGATCAGATGGACGCCTGAGGGCACTGGGTCCTTC +
Preference number: 3 (lower is better)
Translates to: LPCIPACLMLVP*IRWTPEGTGSF
Trigger: GAAGGACCCAGTGCCCTCAGGCGTCCATCTGATGCATGGGACCAACATAAGGCAGGCAGGGATACAAGGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp GAGTCTTCGAAGTGGCCATTGCTCAACTTGAATGGCTaGCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCT +
Preference number: 3 (lower is better)
Translates to: ESSKWPLLNLNG*LGRAEGQVLMA
Trigger: AGCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAATGGCCACTTCGAAGACTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp CAGGGGCTGCTGTGCTCATTTCACAGATGCAGTACCTaGAACCCAGAGAGTACAGGGCCCCTGCTCATCCTC +
Preference number: 3 (lower is better)
Translates to: QGLLCSFHRCST*NPESTGPLLIL
Trigger: GAGGATGAGCAGGGGCCCTGTACTCTCTGGGTTGCAGGTACTGCATCTGTGAAATGAGCACAGCAGCCCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp TGGCCCTATACCTCAGGAGATGCACCCAGGAGCAGCTaGAGGTCTTCTAGAAAGCCCTCTAGGGACAGCCCT +
Preference number: 3 (lower is better)
Translates to: WPYTSGDAPRSS*RSSRKPSRDSP
Trigger: AGGGCTGTCCCTAGAGGGCTTTCTAGAAGACCTGCAGCTGCTCCTGGGTGCATCTCCTGAGGTATAGGGCCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp CCCACGCTAGAGGGTAGTGAGGTGATCTCAGCTCACTaGAACCTCCGCCTTCCGGGTTCAAGCGATTCTCCT +
Preference number: 3 (lower is better)
Translates to: PTLEGSEVISAH*NLRLPGSSDSP
Trigger: AGGAGAATCGCTTGAACCCGGAAGGCGGAGGTTGCAGTGAGCTGAGATCACCTCACTACCCTCTAGCGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp AAAACGCAGATGAGCTTCCTGTGCTCGAGCCAGGCTTaGCCAGGGAATTGTGTACGCATGCACCCAGGGCAG +
Preference number: 3 (lower is better)
Translates to: KTQMSFLCSSQA*PGNCVRMHPGQ
Trigger: CTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGCCTGGCTCGAGCACAGGAAGCTCATCTGCGTTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp TCAGCTCTCCCAGCTGCAGCAGAGGATGCTGCCTATTaGACCATACTGCCCATCAGACCATACTGCCAGGCC +
Preference number: 3 (lower is better)
Translates to: SALPAAAEDAAY*TILPIRPYCQA
Trigger: GGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCTGCTGCAGCTGGGAGAGCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp GAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTaGCTCCAACATCTGGGCTCAACGTCCAGGGCCCAA +
Preference number: 3 (lower is better)
Translates to: EGQILGLKSRLV*LQHLGSTSRAQ
Trigger: TTGGGCCCTGGACGTTGAGCCCAGATGTTGGAGCCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp TGCCTGCAAGTGCTCCTTGACATATGCTGGTGGTGGTaGGGAGGCTGTTCGAGTCTCTGGCTTTGGCCTCAG +
Preference number: 3 (lower is better)
Translates to: CLQVLLDICWWW*GGCSSLWLWPQ
Trigger: CTGAGGCCAAAGCCAGAGACTCGAACAGCCTCCCCACCACCACCAGCATATGTCAAGGAGCACTTGCAGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp TCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTaGCTGTTGCGCAGGGATCAGGTGCACTTGAGTCTT +
Preference number: 3 (lower is better)
Translates to: SYCRQGQPVLLV*LLRRDQVHLSL
Trigger: AAGACTCAAGTGCACCTGATCCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp CTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTaGCCTCCCAGTAGCTCTCCATGTGGCTCCTGGGTT +
Preference number: 3 (lower is better)
Translates to: LLSSETQHEAHV*PPSSSPCGSWV
Trigger: AACCCAGGAGCCACATGGAGAGCTACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp TTCCCCCAGGTCCCAATCAGATCCCTGGGCCCACTGTaGTCCTGGCCATCTCACATCCAAACCCTCAGCAAT +
Preference number: 3 (lower is better)
Translates to: FPQVPIRSLGPL*SWPSHIQTLSN
Trigger: ATTGCTGAGGGTTTGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGGGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp AGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTaGGTTCAGTGGCAGCCACTTTCGCTGCCCTCTCCT +
Preference number: 3 (lower is better)
Translates to: SPRHPYPEYIRV*VQWQPLSLPSP
Trigger: AGGAGAGGGCAGCGAAAGTGGCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp GCCTGGTGGGGCTCCCAAGGACCTTTCAGGAGCATGTaGCCCAGATTGATTTGCTGTGACAGATGCTGGGTG +
Preference number: 3 (lower is better)
Translates to: AWWGSQGPFRSM*PRLICCDRCWV
Trigger: CACCCAGCATCTGTCACAGCAAATCAATCTGGGCCACATGCTCCTGAAAGGTCCTTGGGAGCCCCACCAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp TACTCATGGAGTACTTGGGGCAACCACACTGGAGCCTaGTGGGGCTCCCAAGGACCTTTCAGGAGCATGTGG +
Preference number: 3 (lower is better)
Translates to: YSWSTWGNHTGA*WGSQGPFRSMW
Trigger: CCACATGCTCCTGAAAGGTCCTTGGGAGCCCCACCAGGCTCCAGTGTGGTTGCCCCAAGTACTCCATGAGTA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp GGTAAGTCCCTAGCCCATGTCTACTCATGGAGTACTTaGGGCAACCACACTGGAGCCTGGTGGGGCTCCCAA +
Preference number: 3 (lower is better)
Translates to: GKSLAHVYSWST*GNHTGAWWGSQ
Trigger: TTGGGAGCCCCACCAGGCTCCAGTGTGGTTGCCCCAAGTACTCCATGAGTAGACATGGGCTAGGGACTTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp AAGGGCCTGGGTAAGTCCCTAGCCCATGTCTACTCATaGAGTACTTGGGGCAACCACACTGGAGCCTGGTGG +
Preference number: 3 (lower is better)
Translates to: KGLGKSLAHVYS*STWGNHTGAWW
Trigger: CCACCAGGCTCCAGTGTGGTTGCCCCAAGTACTCCATGAGTAGACATGGGCTAGGGACTTACCCAGGCCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp GGGAGGAGCCTGTGGTTAGTTCCCAGGCGGGTTTGCTaGGAGAATCACCAGCCTCCATTTCCCAGAGGTCAA +
Preference number: 3 (lower is better)
Translates to: GRSLWLVPRRVC*ENHQPPFPRGQ
Trigger: TTGACCTCTGGGAAATGGAGGCTGGTGATTCTCCCAGCAAACCCGCCTGGGAACTAACCACAGGCTCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp ATAAACACTGGGGGCACCATCCTTAGGCTGAGCCCCTaGAAGTCCCACTCTCCAAGGATGTACTGCACCGGC +
Preference number: 3 (lower is better)
Translates to: INTGGTILRLSP*KSHSPRMYCTG
Trigger: GCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAGGGGCTCAGCCTAAGGATGGTGCCCCCAGTGTTTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
3UTR-3UTR CAA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGGTGCTCGAGCCAGGCTaGGCCAGGGAATTGTGTACG +
Preference number: 3 (lower is better)
Translates to: VAQGSGALESSKWPLLNLVLEPG*ARELCT
Trigger: CGTACACAATTCCCTGGCCAAGCCTGGCTCGAGCAC...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCGGACACATGGGTTATTaGAAACCCCAGGGGGTCAAC +
Preference number: 3 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGGHMGY*KPQGVN
Trigger: GTTGACCCCCTGGGGTTTCAAATAACCCATGTGTCC...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCGGACACATGGGTTATTaGAAACCCCAGGGGGTCAAC +
Preference number: 3 (lower is better)
Translates to: SLDSISSMSSSHSACKCSGHMGY*KPQGVN
Trigger: GTTGACCCCCTGGGGTTTCAAATAACCCATGTGTCC...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGAGGGATCAGGTGCACTaGAGTCTTCGAAGTGGCCAT +
Preference number: 3 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWRDQVH*SLRSGH
Trigger: ATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCT...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCCTCCTGGTGTGGCTGTaGCGCAGGGATCAGGTGCAC +
Preference number: 3 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGLLVWL*RRDQVH
Trigger: GTGCACCTGATCCCTGCGCAACAGCCACACCAGGAG...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 72 bp ACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGAGTaGGCTGCTCTATGCCAGGACCCATGGTATCCAAGG +
Preference number: 3 (lower is better)
Translates to: TQGSGGLINPWE*AALCQDPWYPR
Trigger: CCTTGGATACCATGGGTCCTGGCATAGAGCAGCTCACTCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 72 bp GCAATACTGGTGAGGACCTTAGCAGGCAAAGGTCTGTaGGCATGGGGGACTAAGGAAGTGGGGAGCCTTGCC +
Preference number: 3 (lower is better)
Translates to: AILVRTLAGKGL*AWGTKEVGSLA
Trigger: GGCAAGGCTCCCCACTTCCTTAGTCCCCCATGCTCACAGACCTTTGCCTGCTAAGGTCCTCACCAGTATTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 72 bp TCTGTCTGCACACCCAGGGCTACAGTTGGCCTAATGTaGCTCTTACCTGCCCATAAACCTGGCCCAGAGGGC +
Preference number: 3 (lower is better)
Translates to: SVCTPRATVGLM*LLPAHKPGPEG
Trigger: GCCCTCTGGGCCAGGTTTATGGGCAGGTAAGAGTCACATTAGGCCAACTGTAGCCCTGGGTGTGCAGACAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp GCCCTGGAACTCAGCTCTCCCAGCTGCAGCAGAGGATaGTGCCTATTGGACCATACTGCCCATCAGACCATA +
Preference number: 3 (lower is better)
Translates to: ALELSSPSCSRG*CLLDHTAHQTI
Trigger: TATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCTGCTGCAGCTGGGAGAGCTGAGTTCCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp GACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTaGAAGTGCTCCTTGACATATGCTGGTGGTGGTGGG +
Preference number: 3 (lower is better)
Translates to: DSISSMSSSHSA*KCSLTYAGGGG
Trigger: CCCACCACCACCAGCATATGTCAAGGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp CCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTaGCTGCAAGTGCTCCTTGACATATGCTGGTGGTGG +
Preference number: 3 (lower is better)
Translates to: PGLHQLHVLLPF*LQVLLDICWWW
Trigger: CCACCACCAGCATATGTCAAGGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp GAGTACATCAAACAGGGACTCCTACACTCCTGTCTATaGTCTGGGCTCTGGCTGAAGGAGGCTGCACGGGCA +
Preference number: 3 (lower is better)
Translates to: EYIKQGLLHSCL*SGLWLKEAARA
Trigger: TGCCCGTGCAGCCTCCTTCAGCCAGAGCCCAGAGCATAGACAGGAGTGTAGGAGTCCCTGTTTGATGTACTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp GGGCCAGGCCCATTAGCTCAAAGTCAGGGGCTGCTGTaGTCATTTCACAGATGCAGTACCTGCAACCCAGAG +
Preference number: 3 (lower is better)
Translates to: GPGPLAQSQGLL*SFHRCSTCNPE
Trigger: CTCTGGGTTGCAGGTACTGCATCTGTGAAATGAGCACAGCAGCCCCTGACTTTGAGCTAATGGGCCTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp TCTAGAAAGCCCTCTAGGGACAGCCCTGGAAACCCTTaGTCCTGCTCCAAGGGTCCACAAGCCCAGGTAACT +
Preference number: 3 (lower is better)
Translates to: SRKPSRDSPGNP*SCSKGPQAQVT
Trigger: AGTTACCTGGGCTTGTGGACCCTTGGAGCAGGAGCAAGGGTTTCCAGGGCTGTCCCTAGAGGGCTTTCTAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp CTGTCAGGAGGAGTCTATGTGCAAGTCCATGAGTTCTaGAAGGCCAGGGCCCCACCTGAACCATCCAACCTC +
Preference number: 3 (lower is better)
Translates to: LSGGVYVQVHEF*KARAPPEPSNL
Trigger: GAGGTTGGATGGTTCAGGTGGGGCCCTGGCCTTGCAGAACTCATGGACTTGCACATAGACTCCTCCTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp TATGACATGGGGCAGTGTTTGAGCTTACATGGGCTCTaGGCTCCCATGACTTGGAGGCAGTGGTTGGGCCTC +
Preference number: 3 (lower is better)
Translates to: YDMGQCLSLHGL*APMTWRQWLGL
Trigger: GAGGCCCAACCACTGCCTCCAAGTCATGGGAGCGCAGAGCCCATGTAAGCTCAAACACTGCCCCATGTCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp GGCCCCTCCTCAAGACCAAGTGGAAGGGAAGAGCTCTaGAAACTGGCAGAGAACTTGGTCTGGGGCCATGTA +
Preference number: 3 (lower is better)
Translates to: GPSSRPSGREEL*KLAENLVWGHV
Trigger: TACATGGCCCCAGACCAAGTTCTCTGCCAGTTTGCAGAGCTCTTCCCTTCCACTTGGTCTTGAGGAGGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp GAAACCTCTTCCTTTGCGTGGCTCCCCTGCGTTGTTTaGAGGAGAGGTCTGGAGGAAAGAGAGTCACCCCAG +
Preference number: 3 (lower is better)
Translates to: ETSSFAWLPCVV*RRGLEERESPQ
Trigger: CTGGGGTGACTCTCTTTCCTCCAGACCTCTCCTGCAAACAACGCAGGGGAGCCACGCAAAGGAAGAGGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp CCAGGTGTGGAAACCTCTTCCTTTGCGTGGCTCCCCTaGGTTGTTTGCAGGAGAGGTCTGGAGGAAAGAGAG +
Preference number: 3 (lower is better)
Translates to: PGVETSSFAWLP*VVCRRGLEERE
Trigger: CTCTCTTTCCTCCAGACCTCTCCTGCAAACAACGCAGGGGAGCCACGCAAAGGAAGAGGTTTCCACACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp TGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTaGAGGACTAATCAATCCCTGGGAGTGAGCTGCTCT +
Preference number: 3 (lower is better)
Translates to: WPGNCVRMHPGQ*RTNQSLGVSCS
Trigger: AGAGCAGCTCACTCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp CCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTaGTGCAACATCCACAAGCTCGCCAAGGCCCTTCCT +
Preference number: 3 (lower is better)
Translates to: PDSVTLQHCTLF*CNIHKLAKALP
Trigger: AGGAAGGGCCTTGGCGAGCTTGTGGATGTTGCACCAGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp TTCTGCCTGCAAGTGCTCCTTGACATATGCTGGTGGTaGTGGGGAGGCTGTTCGAGTCTCTGGCTTTGGCCT +
Preference number: 3 (lower is better)
Translates to: FCLQVLLDICWW*WGGCSSLWLWP
Trigger: AGGCCAAAGCCAGAGACTCGAACAGCCTCCCCACCACCACCAGCATATGTCAAGGAGCACTTGCAGGCAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp CCATTCTGCCTGCAAGTGCTCCTTGACATATGCTGGTaGTGGTGGGGAGGCTGTTCGAGTCTCTGGCTTTGG +
Preference number: 3 (lower is better)
Translates to: PFCLQVLLDICW*WWGGCSSLWLW
Trigger: CCAAAGCCAGAGACTCGAACAGCCTCCCCACCACCACCAGCATATGTCAAGGAGCACTTGCAGGCAGAATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTaGCCATTGCTCAACTTGAATGGCTGCCTGGGTCGG +
Preference number: 3 (lower is better)
Translates to: VAQGSGALESSK*PLLNLNGCLGR
Trigger: CCGACCCAGGCAGCCATTCAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp CAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTaGCCATCTCACATCCAAACCCTCAGCAATGGTTGT +
Preference number: 3 (lower is better)
Translates to: QVPIRSLGPLWS*PSHIQTLSNGC
Trigger: ACAACCATTGCTGAGGGTTTGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp GCTGAGACAGACTCAACTTTCAGTCTGGAACTGGGCTaGGTGTCTGTCAGTCCACGCCACCCATATCCGGAG +
Preference number: 3 (lower is better)
Translates to: AETDSTFSLELG*VSVSPRHPYPE
Trigger: CTCCGGATATGGGTGGCGTGGACTGACAGACACCCAGCCCAGTTCCAGACTGAAAGTTGAGTCTGTCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp AGGGAAGAGCTCTGCAAACTGGCAGAGAACTTGGTCTaGGGCCATGTAGTGGAGGGGCAACACCCCAAAGAC +
Preference number: 3 (lower is better)
Translates to: REELCKLAENLV*GHVVEGQHPKD
Trigger: GTCTTTGGGGTGTTGCCCCTCCACTACATGGCCCCAGACCAAGTTCTCTGCCAGTTTGCAGAGCTCTTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp GGGATGGACGCAAGCTGGCTGTCCCAGAGTGTGGAGTaGCTGTGTTCTTTCCCTATAGCAAAGCCAAGGGCA +
Preference number: 3 (lower is better)
Translates to: GMDASWLSQSVE*LCSFPIAKPRA
Trigger: TGCCCTTGGCTTTGCTATAGGGAAAGAACACAGCCACTCCACACTCTGGGACAGCCAGCTTGCGTCCATCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp CCACTTCTAAGAAGATACTACTACATGGGGGAGAAATaGGTGGGCTCAGCAGGACAGGTCTGGCGCCTGCCC +
Preference number: 3 (lower is better)
Translates to: PLLRRYYYMGEK*VGSAGQVWRLP
Trigger: GGGCAGGCGCCAGACCTGTCCTGCTGAGCCCACCCATTTCTCCCCCATGTAGTAGTATCTTCTTAGAAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR-3UTR CAA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCGGCAGAAGGAAACCCTaGCCCCAGTGCTACCTGGGA +
Preference number: 3 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFGRRKP*PQCYLG
Trigger: TCCCAGGTAGCACTGGGGCAAGGGTTTCCTTCTGCC...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCGGTTGCCAGTTGGCGTaGGCCCTGGACTCAGAAGAG +
Preference number: 3 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFGCQLA*ALDSEE
Trigger: CTCTTCTGAGTCCAGGGCCAACGCCAACTGGCAACC...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCAGTACATACCTTCTCTaGCTCTCCATGCCTGGCGAA +
Preference number: 3 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGSTYLL*LSMPGE
Trigger: TTCGCCAGGCATGGAGAGCAAGAGAAGGTATGTACT...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCTTTCTGGGCAGAAAGTaGTGCCCGAGGCCGGCTCCT +
Preference number: 3 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFFLGRK*CPRPAP
Trigger: AGGAGCCGGCCTCGGGCACAACTTTCTGCCCAGAAA...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCTCTTTCCAGACTGCCTaGTATCCCTGCCTGCCTTAT +
Preference number: 3 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGSFQTA*YPCLPY
Trigger: ATAAGGCAGGCAGGGATACAAGGCAGTCTGGAAAGA...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 72 bp TCATCCAAAGCGTATCCAGGTGATTTGGGGCCAAGCTaGCCCTTGAACCCAGGTGTCCATGCTCTCTGTCCC +
Preference number: 3 (lower is better)
Translates to: SSKAYPGDLGPS*PLNPGVHALCP
Trigger: GGGACAGAGAGCATGGACACCTGGGTTCAAGGGTCAGCTTGGCCCCAAATCACCTGGATACGCTTTGGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 72 bp GTTTGCTTTGCTTGGTCACGTAGCTCAGCCTCACACTaGCTTCCAGGAACAGCAGAGGGACTTGGACGCCTC +
Preference number: 3 (lower is better)
Translates to: VCFAWSRSSASH*LPGTAEGLGRL
Trigger: GAGGCGTCCAAGTCCCTCTGCTGTTCCTGGAAGTCAGTGTGAGGCTGAGCTACGTGACCAAGCAAAGCAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp CTGGAACTCAGCTCTCCCAGCTGCAGCAGAGGATGCTaGCTATTGGACCATACTGCCCATCAGACCATACTG +
Preference number: 3 (lower is better)
Translates to: LELSSPSCSRGC*LLDHTAHQTIL
Trigger: CAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCTGCTGCAGCTGGGAGAGCTGAGTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp GTCAGAGGACTAGGTTCAAACTCCAGCATGGCCAGCTaGTGGCTGTGTGACCTTGGGCATGTTAAGCCTCAG +
Preference number: 3 (lower is better)
Translates to: VRGLGSNSSMAS*WLCDLGHVKPQ
Trigger: CTGAGGCTTAACATGCCCAAGGTCACACAGCCAGCAGCTGGCCATGCTGGAGTTTGAACCTAGTCCTCTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp CACCCGGGCCGACAGGGAGAGAGCTCAGTCTGCGTCTaGTGCTTTCTGTTTGATTCATCACTTTCCCCTTCA +
Preference number: 3 (lower is better)
Translates to: HPGRQGESSVCV*CFLFDSSLSPS
Trigger: TGAAGGGGAAAGTGATGAATCAAACAGAAAGCAGCAGACGCAGACTGAGCTCTCTCCCTGTCGGCCCGGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp ATCTGGCACCCGGGCCGACAGGGAGAGAGCTCAGTCTaGGTCTGCTGCTTTCTGTTTGATTCATCACTTTCC +
Preference number: 3 (lower is better)
Translates to: IWHPGRQGESSV*VCCFLFDSSLS
Trigger: GGAAAGTGATGAATCAAACAGAAAGCAGCAGACGCAGACTGAGCTCTCTCCCTGTCGGCCCGGGTGCCAGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp TTTCCCAGAGGTCAACGGAGTGTGGTTCTCAGGGGGTaGCAAGCTCCAAGCATGAAGCCAAAAAGGTCAGGG +
Preference number: 3 (lower is better)
Translates to: FPRGQRSVVLRG*QAPSMKPKRSG
Trigger: CCCTGACCTTTTTGGCTTCATGCTTGGAGCTTGGCACCCCCTGAGAACCACACTCCGTTGACCTCTGGGAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp TTTCCAGACTGCCTTGTATCCCTGCCTGCCTTATGTTaGTCCCATGCATCAGATGGACGCCTGAGGGCACTG +
Preference number: 3 (lower is better)
Translates to: FPDCLVSLPALC*SHASDGRLRAL
Trigger: CAGTGCCCTCAGGCGTCCATCTGATGCATGGGACCAACATAAGGCAGGCAGGGATACAAGGCAGTCTGGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp CCAGAGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATaGCTCTTCCTCCAGCAATTGCATCACTCTGACCTC +
Preference number: 3 (lower is better)
Translates to: PEEKRLSAFLGS*LFLQQLHHSDL
Trigger: GAGGTCAGAGTGATGCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCTCTGG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp GAACTCCAGGCTTTTGTCCAGACTGTCCCTACTGCCTaGTATATTCCTGTCCTATCCGCCCCTCCTCAAGCC +
Preference number: 3 (lower is better)
Translates to: ELQAFVQTVPTA*YIPVLSAPPQA
Trigger: GGCTTGAGGAGGGGCGGATAGGACAGGAATATACCAGGCAGTAGGGACAGTCTGGACAAAAGCCTGGAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp CTACCTCAAGGGTTGCCTTTGGACTGTGTCCCCACATaGTCACATTTGCATCTCCAGACGCCCCAATGCTGC +
Preference number: 3 (lower is better)
Translates to: LPQGLPLDCVPT*SHLHLQTPQCC
Trigger: GCAGCATTGGGGCGTCTGGAGATGCAAATGTGACCATGTGGGGACACAGTCCAAAGGCAACCCTTGAGGTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp AGAGGACTAGGTTCAAACTCCAGCATGGCCAGCTGCTaGCTGTGTGACCTTGGGCATGTTAAGCCTCAGTCC +
Preference number: 3 (lower is better)
Translates to: RGLGSNSSMASC*LCDLGHVKPQS
Trigger: GGACTGAGGCTTAACATGCCCAAGGTCACACAGCCAGCAGCTGGCCATGCTGGAGTTTGAACCTAGTCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp CCGGTATTGGAAATCCTGGGGTTGGTTAGTGAAAGCTaGGAGGAGCCTGTGGTTAGTTCCCAGGCGGGTTTG +
Preference number: 3 (lower is better)
Translates to: PVLEILGLVSES*EEPVVSSQAGL
Trigger: CAAACCCGCCTGGGAACTAACCACAGGCTCCTCCCAGCTTTCACTAACCAACCCCAGGATTTCCAATACCGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTGGTTGCCAGTTGGCGTaGGCCCTGGACTCAGAAGAG +
Preference number: 3 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTGCQLA*ALDSEE
Trigger: CTCTTCTGAGTCCAGGGCCAACGCCAACTGGCAACC...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACATTTCTGGGCAGAAAGTaGTGCCCGAGGCCGGCTCCT +
Preference number: 3 (lower is better)
Translates to: LLLLSLSIKETARWASDTFLGRK*CPRPAP
Trigger: AGGAGCCGGCCTCGGGCACAACTTTCTGCCCAGAAA...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGCAAGACCTCAGGGGCTaGCACAGCCTGGACTCCATC +
Preference number: 3 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMQDLRG*HSLDSI
Trigger: GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTG...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTGAAGAAGTGGATTGTTaGCACCGCCTGGGCAAAGGG +
Preference number: 3 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPEEVDC*HRLGKG
Trigger: CCCTTTGCCCAGGCGGTGCAAACAATCCACTTCTTC...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTTTAGGAACCAGGAGGTaGAGAACCCCAGGGATAGCC +
Preference number: 3 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPLGTRR*RTPGIA
Trigger: GGCTATCCCTGGGGTTCTCAACCTCCTGGTTCCTAA...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 72 bp TCCTGGTGTGGCTGTTGCGCAGGGATCAGGTGCACTTaGGTCTTCGAAGTGGCCATTGCTCAACTTGAATGG +
Preference number: 3 (lower is better)
Translates to: SWCGCCAGIRCT*VFEVAIAQLEW
Trigger: CCATTCAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAACAGCCACACCAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 72 bp ATAGGACCCTCCACTTGGTATCATCTCCCTGGTGCCTaGCACAAAGTAGGTCTTGAGAGACTGAGGCCCTGG +
Preference number: 3 (lower is better)
Translates to: IGPSTWYHLPGA*HKVGLERLRPW
Trigger: CCAGGGCCTCAGTCTCTCAAGACCTACTTTGTGTCAGGCACCAGGGAGATGATACCAAGTGGAGGGTCCTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 72 bp GGTGCCTCATCCCAGAACCTCACAGGCCTAGGGACCTaGAATGCTCCCCATGACAAGGCAAACTTCATATCC +
Preference number: 3 (lower is better)
Translates to: GASSQNLTGLGT*NAPHDKANFIS
Trigger: GGATATGAAGTTTGCCTTGTCATGGGGAGCATTTCAGGTCCCTAGGCCTGTGAGGTTCTGGGATGAGGCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 72 bp GTGTCCAGCTCCTTTCTGAGGTCATGTCGAGGTGGATaGTCCAAATCCTGTCCTGCAACCGAAGCCTCTGAG +
Preference number: 3 (lower is better)
Translates to: VSSSFLRSCRGG*SKSCPATEASE
Trigger: CTCAGAGGCTTCGGTTGCAGGACAGGATTTGGATCATCCACCTCGACATGACCTCAGAAAGGAGCTGGACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR GCA 72 bp CAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTaGAGCAAAGACCTCCAGACCCTCCCCTCCAGAAAG +
Preference number: 3 (lower is better)
Translates to: QLNERGCATQEL*SKDLQTLPSRK
Trigger: CTTTCTGGAGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp CCTGCCTTCCCTTCTTTCCAGACTGCCTTGTATCCCTaGCTGCCTTATGTTGGTCCCATGCATCAGATGGAC +
Preference number: 3 (lower is better)
Translates to: PAFPSFQTALYP*LPYVGPMHQMD
Trigger: GTCCATCTGATGCATGGGACCAACATAAGGCAGGCAGGGATACAAGGCAGTCTGGAAAGAAGGGAAGGCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp TGCAGAACTCCAGGCTTTTGTCCAGACTGTCCCTACTaGCTGGTATATTCCTGTCCTATCCGCCCCTCCTCA +
Preference number: 3 (lower is better)
Translates to: CRTPGFCPDCPY*LVYSCPIRPSS
Trigger: TGAGGAGGGGCGGATAGGACAGGAATATACCAGGCAGTAGGGACAGTCTGGACAAAAGCCTGGAGTTCTGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp GGTTGCCTTTGGACTGTGTCCCCACATGGTCACATTTaGATCTCCAGACGCCCCAATGCTGCTTCTCGGATA +
Preference number: 3 (lower is better)
Translates to: GCLWTVSPHGHI*ISRRPNAASRI
Trigger: TATCCGAGAAGCAGCATTGGGGCGTCTGGAGATGCAAATGTGACCATGTGGGGACACAGTCCAAAGGCAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp CCAGAGATGAGGGGGATAAGAAGGTTTCTGAAGGCATaGTACAGAAGGTGCCAGCAGAGGTATGGGCTAGGG +
Preference number: 3 (lower is better)
Translates to: PEMRGIRRFLKA*YRRCQQRYGLG
Trigger: CCCTAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTATCCCCCTCATCTCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp ACCCTGCTGAGCCTTGGTGTCCTCAACTTTGTAATGTaGGGACAACTAAAAACCCCATGTGCCAGCCCTGGC +
Preference number: 3 (lower is better)
Translates to: TLLSLGVLNFVM*GQLKTPCASPG
Trigger: GCCAGGGCTGGCACATGGGGTTTTTAGTTGTCCCCACATTACAAAGTTGAGGACACCAAGGCTCAGCAGGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp CGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTaGTCTTCACAACTCTACCTCAAGGGTTGCCTTTGG +
Preference number: 3 (lower is better)
Translates to: RYCCRQHSGLGE*SSQLYLKGCLW
Trigger: CCAAAGGCAACCCTTGAGGTAGAGTTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp CACATGCTGAGACAGACTCAACTTTCAGTCTGGAACTaGGCTGGGTGTCTGTCAGTCCACGCCACCCATATC +
Preference number: 3 (lower is better)
Translates to: HMLRQTQLSVWN*AGCLSVHATHI
Trigger: GATATGGGTGGCGTGGACTGACAGACACCCAGCCCAGTTCCAGACTGAAAGTTGAGTCTGTCTCAGCATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp TATCCTCACATGCTGAGACAGACTCAACTTTCAGTCTaGAACTGGGCTGGGTGTCTGTCAGTCCACGCCACC +
Preference number: 3 (lower is better)
Translates to: YPHMLRQTQLSV*NWAGCLSVHAT
Trigger: GGTGGCGTGGACTGACAGACACCCAGCCCAGTTCCAGACTGAAAGTTGAGTCTGTCTCAGCATGTGAGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp TCAGGCTGCTCCAGGGGATTAGCTCTCAGGCACTTTTaGTTACTTACCCACCTGGCCTCTGCAGCAGAGAAA +
Preference number: 3 (lower is better)
Translates to: SGCSRGLALRHF*LLTHLASAAEK
Trigger: TTTCTCTGCTGCAGAGGCCAGGTGGGTAAGTAACCAAAAGTGCCTGAGAGCTAATCCCCTGGAGCAGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp TTGCGTGGCTCCCCTGCGTTGTTTGCAGGAGAGGTCTaGAGGAAAGAGAGTCACCCCAGAAATACATCGATG +
Preference number: 3 (lower is better)
Translates to: LRGSPALFAGEV*RKESHPRNTSM
Trigger: CATCGATGTATTTCTGGGGTGACTCTCTTTCCTCCAGACCTCTCCTGCAAACAACGCAGGGGAGCCACGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAATCTTTCCAGACTGCCTaGTATCCCTGCCTGCCTTAT +
Preference number: 3 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQSFQTA*YPCLPY
Trigger: ATAAGGCAGGCAGGGATACAAGGCAGTCTGGAAAGA...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGTCCAGTTCAGGGGGCTaGTCCAGGGCAGAAGGTCAT +
Preference number: 3 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMSSSGG*SRAEGH
Trigger: ATGACCTTCTGCCCTGGACAAGCCCCCTGAACTGGA...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTACTCTACCTCAAGGGTaGCCTTTGGACTGTGTCCCC +
Preference number: 3 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCTLPQG*PLDCVP
Trigger: GGGGACACAGTCCAAAGGCAACCCTTGAGGTAGAGT...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 72 bp GGAAACACCCCTCACTGGCTCAAGCCTTCAGTTAAATaGACGTGGATGTGCGACCCAGGAACTGTGCAGCAA +
Preference number: 3 (lower is better)
Translates to: GNTPHWLKPSVK*TWMCDPGTVQQ
Trigger: TTGCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCCAGTGAGGGGTGTTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 72 bp ATCTCCAGACGCCCCAATGCTGCTTCTCGGATATTCTaGAGGCATCCTACACTGTCAAGCTCCCCGACTGTT +
Preference number: 3 (lower is better)
Translates to: ISRRPNAASRIF*RHPTLSSSPTV
Trigger: AACAGTCGGGGAGCTTGACAGTGTAGGATGCCTTCAGAATATCCGAGAAGCAGCATTGGGGCGTCTGGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 72 bp CCTCCTGGGCCTGGCTTACAGTTGGTGCCTAATAAATaGCTGTGCAGGAATGATGGGCCTGCAGGTAAGACA +
Preference number: 3 (lower is better)
Translates to: PPGPGLQLVPNK*LCRNDGPAGKT
Trigger: TGTCTTACCTGCAGGCCCATCATTCCTGCACAGTCATTTATTAGGCACCAACTGTAAGCCAGGCCCAGGAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 72 bp TTCCTTGTGCCTGGCACAGTGCCAGCAGATGGTGACTaGATGCATGCCCCATGGCCTAAGGATAAGGATCTA +
Preference number: 3 (lower is better)
Translates to: FLVPGTVPADGD*MHAPWPKDKDL
Trigger: TAGATCCTTATCCTTAGGCCATGGGGCATGCATTCAGTCACCATCTGCTGGCACTGTGCCAGGCACAAGGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp TGCCTTCAACAAGGGTTTTTAGACACATCCATCTGGTaGCTCATCCCAGAACCTCACAGGCCTAGGGACCTG +
Preference number: 3 (lower is better)
Translates to: CLQQGFLDTSIW*LIPEPHRPRDL
Trigger: CAGGTCCCTAGGCCTGTGAGGTTCTGGGATGAGGCACCAGATGGATGTGTCTAAAAACCCTTGTTGAAGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp GAACCATCCAACCTCCTGGGCCTGGCTTACAGTTGGTaGCTAATAAATGACTGTGCAGGAATGATGGGCCTG +
Preference number: 3 (lower is better)
Translates to: EPSNLLGLAYSW*LINDCAGMMGL
Trigger: CAGGCCCATCATTCCTGCACAGTCATTTATTAGGCACCAACTGTAAGCCAGGCCCAGGAGGTTGGATGGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp ATGTGGATAAGGTCTGGTTCATTTCCCTCCCAGACCTaGCTCACCTTGCTGTGTGACACTGGGCAAGTCATG +
Preference number: 3 (lower is better)
Translates to: MWIRSGSFPSQT*LTLLCDTGQVM
Trigger: CATGACTTGCCCAGTGTCACACAGCAAGGTGAGGCAGGTCTGGGAGGGAAATGAACCAGACCTTATCCACAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp CACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTaGCCCTGGACTCAGAAGAGCCAGCTTCTCATAGGG +
Preference number: 3 (lower is better)
Translates to: HLTKSKEVASWR*PWTQKSQLLIG
Trigger: CCCTATGAGAAGCTGGCTCTTCTGAGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp TCTTACCTGCCCATAAACCTGGCCCAGAGGGCTTTATaGGCCAGAATCCCTGGGTTTAGTAGCTACATGGAC +
Preference number: 3 (lower is better)
Translates to: SYLPINLAQRAL*ARIPGFSSYMD
Trigger: GTCCATGTAGCTACTAAACCCAGGGATTCTGGCCCATAAAGCCCTCTGGGCCAGGTTTATGGGCAGGTAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp CTAGTTATGCTGGCCTCAGCGTCTCTGATAGTCAAATaGACACCAATGGCAGCCTCATCCTCCCTTCCTGTC +
Preference number: 3 (lower is better)
Translates to: LVMLASASLIVK*TPMAASSSLPV
Trigger: GACAGGAAGGGAGGATGAGGCTGCCATTGGTGTCCATTTGACTATCAGAGACGCTGAGGCCAGCATAACTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp GAGTGCCTTCAACAAGGGTTTTTAGACACATCCATCTaGTGCCTCATCCCAGAACCTCACAGGCCTAGGGAC +
Preference number: 3 (lower is better)
Translates to: ECLQQGFLDTSI*CLIPEPHRPRD
Trigger: GTCCCTAGGCCTGTGAGGTTCTGGGATGAGGCACCAGATGGATGTGTCTAAAAACCCTTGTTGAAGGCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp CCTGAACCATCCAACCTCCTGGGCCTGGCTTACAGTTaGTGCCTAATAAATGACTGTGCAGGAATGATGGGC +
Preference number: 3 (lower is better)
Translates to: PEPSNLLGLAYS*CLINDCAGMMG
Trigger: GCCCATCATTCCTGCACAGTCATTTATTAGGCACCAACTGTAAGCCAGGCCCAGGAGGTTGGATGGTTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTAGGGCAGATTCTGGGATaGAAATCCAGGCTGGTGTGG +
Preference number: 3 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLGQILG*KSRLVW
Trigger: CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCC...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTAGCCTGCAAGTGCTCCTaGACATATGCTGGTGGTGGT +
Preference number: 3 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLACKCS*TYAGGG
Trigger: ACCACCACCAGCATATGTCAAGGAGCACTTGCAGGC...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 72 bp AGGGGGTTCGGGGCCTATTTCAATAAGGCAGCTGTATaGGACCCATGGAGAAACCCACTGACAACTGGGAAA +
Preference number: 3 (lower is better)
Translates to: RGFGAYFNKAAV*DPWRNPLTTGK
Trigger: TTTCCCAGTTGTCAGTGGGTTTCTCCATGGGTCTCATACAGCTGCCTTATTGAAATAGGCCCCGAACCCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 72 bp AGCAATGGTTGTGAGTCAGTTCTGTTCCAGAATATCTaGTGCCACTGCTACAGACCCCAGCCACCTCCAGAC +
Preference number: 3 (lower is better)
Translates to: SNGCESVLFQNI*CHCYRPQPPPD
Trigger: GTCTGGAGGTGGCTGGGGTCTGTAGCAGTGGCATCAGATATTCTGGAACAGAACTGACTCACAACCATTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 72 bp CCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTaGTGTGCCAACAGATGGATTTATGACCACGTGTGT +
Preference number: 3 (lower is better)
Translates to: PFIHTVGQGRDP*CANRWIYDHVC
Trigger: ACACACGTGGTCATAAATCCATCTGTTGGCACATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp ATGCAGTTTCTCCACCGTAGTGCAACCCAATGCATATaGAGGCATCACCGGGCCATCATCACATCACTCTGT +
Preference number: 3 (lower is better)
Translates to: MQFLHRSATQCI*RHHRAIITSLC
Trigger: ACAGAGTGATGTGATGATGGCCCGGTGATGCCTGCATATGCATTGGGTTGCACTACGGTGGAGAAACTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTaGCGTTGGCCCTGGACTCAGAAGAGCCAGCTTCTC +
Preference number: 3 (lower is better)
Translates to: TFHLTKSKEVAS*RWPWTQKSQLL
Trigger: GAGAAGCTGGCTCTTCTGAGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp CTCAGGCAGTACATACCTTCTCTTGCTCTCCATGCCTaGCGAATGGACATTCAGATGCCAGCATGCACATTC +
Preference number: 3 (lower is better)
Translates to: LRQYIPSLALHA*RMDIQMPACTF
Trigger: GAATGTGCATGCTGGCATCTGAATGTCCATTCGCCAGGCATGGAGAGCAAGAGAAGGTATGTACTGCCTGAG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp GTGGCTTTCAGTGCGGGCCAAGAGAGTAGTGAGCAATaGTCAGTTATTGAGCTGTGGAGTGCCTTCAACAAG +
Preference number: 3 (lower is better)
Translates to: VAFSAGQESSEQ*SVIELWSAFNK
Trigger: CTTGTTGAAGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCACTGAAAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp CATGAAGCCAAAAAGGTCAGGGATGTGGATAAGGTCTaGTTCATTTCCCTCCCAGACCTGCCTCACCTTGCT +
Preference number: 3 (lower is better)
Translates to: HEAKKVRDVDKV*FISLPDLPHLA
Trigger: AGCAAGGTGAGGCAGGTCTGGGAGGGAAATGAACCAGACCTTATCCACATCCCTGACCTTTTTGGCTTCATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGATGAGACAGCCTGGTTaGCCATGTTTCTTAGGACCC +
Preference number: 3 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMMRQPG*PCFLGP
Trigger: GGGTCCTAAGAAACATGGCAAACCAGGCTGTCTCAT...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 72 bp ACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTaGTGGAGCCAATCCAGGTGTCCTAGAAATATCCTA +
Preference number: 3 (lower is better)
Translates to: TNTEQLPSATLM*WSQSRCPRNIL
Trigger: TAGGATATTTCTAGGACACCTGGATTGGCTCCATCACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
3UTR TCA 72 bp CTCAGCCTATGCCAGAATCACAGCTCAGCCAGCCTATaGGCAAGTTTCTTAGCCCCAGTTTGTTTCTTCGTC +
Preference number: 3 (lower is better)
Translates to: LSLCQNHSSASL*ASFLAPVCFFV
Trigger: GACGAAGAAACAAACTGGGGCTAAGAAACTTGCTCATAGGCTGGCTGAGCTGTGATTCTGGCATAGGCTGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp CTCCATGCCTGGCGAATGGACATTCAGATGCCAGCATaGACATTCCACTTGACTAAGAGTAAAGAGGTTGCC +
Preference number: 3 (lower is better)
Translates to: LHAWRMDIQMPA*TFHLTKSKEVA
Trigger: GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTCCATTCGCCAGGCATGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp GTTTCACAGGGCTTAAAATCAAGGTATTGGCAGGACTaGATTCTTCTTGAGGCCCCAGAGGAGAAGAGGCTG +
Preference number: 3 (lower is better)
Translates to: VSQGLKSRYWQD*ILLEAPEEKRL
Trigger: CAGCCTCTTCTCCTCTGGGGCCTCAAGAAGAATGCAGTCCTGCCAATACCTTGATTTTAAGCCCTGTGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp GAGATGAGAGCATCATACTGGGAGTCAGGAGTCAAGTaGTGTGTTACTTCAAGTAAGCCCCATCCCTCTCTG +
Preference number: 3 (lower is better)
Translates to: EMRASYWESGVK*CVTSSKPHPSL
Trigger: CAGAGAGGGATGGGGCTTACTTGAAGTAACACAGCACTTGACTCCTGACTCCCAGTATGATGCTCTCATCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp ACATGGTCACATTTGCATCTCCAGACGCCCCAATGCTaGTTCTCGGATATTCTGAAGGCATCCTACACTGTC +
Preference number: 3 (lower is better)
Translates to: TWSHLHLQTPQC*FSDILKASYTV
Trigger: GACAGTGTAGGATGCCTTCAGAATATCCGAGAAGCAGCATTGGGGCGTCTGGAGATGCAAATGTGACCATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp TCTCAGGCACTTTTGGTTACTTACCCACCTGGCCTCTaGAGCAGAGAAAACCTCAGCTCACCATTGCAACTA +
Preference number: 3 (lower is better)
Translates to: SQALLVTYPPGL*SRENLSSPLQL
Trigger: TAGTTGCAATGGTGAGCTGAGGTTTTCTCTGCTGCAGAGGCCAGGTGGGTAAGTAACCAAAAGTGCCTGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp GTGTCTACCAACTCTCTGTCTTCCTTGGTTTCAGGCTaGTCCAGGGGATTAGCTCTCAGGCACTTTTGGTTA +
Preference number: 3 (lower is better)
Translates to: VSTNSLSSLVSG*SRGLALRHFWL
Trigger: TAACCAAAAGTGCCTGAGAGCTAATCCCCTGGAGCAGCCTGAAACCAAGGAAGACAGAGAGTTGGTAGACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp AGCTGTATGAGACCCATGGAGAAACCCACTGACAACTaGGAAAAGCATCCAACTGTGAGACAAGGCCTCAGT +
Preference number: 3 (lower is better)
Translates to: SCMRPMEKPTDN*EKHPTVRQGLS
Trigger: ACTGAGGCCTTGTCTCACAGTTGGATGCTTTTCCCAGTTGTCAGTGGGTTTCTCCATGGGTCTCATACAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CCA 72 bp ATGCAACCTGACCTGCAACTGCACCCTGCTGAGCCTTaGTGTCCTCAACTTTGTAATGTGGGGACAACTAAA +
Preference number: 3 (lower is better)
Translates to: MQPDLQLHPAEP*CPQLCNVGTTK
Trigger: TTTAGTTGTCCCCACATTACAAAGTTGAGGACACCAAGGCTCAGCAGGGTGCAGTTGCAGGTCAGGTTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCCTAAGAGTAAAGAGGTaGCCAGTTGGCGTTGGCCCT +
Preference number: 3 (lower is better)
Translates to: DIQMPACTFHLTKSKEVALRVKR*PVGVGP
Trigger: AGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAG...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTCAGACCCTGGACAAGTaGCAGCCTCCTGCCCCAGCC +
Preference number: 3 (lower is better)
Translates to: EALVALVLNNLYKGDYYSQTLDK*QPPAPA
Trigger: GGCTGGGGCAGGAGGCTGCAACTTGTCCAGGGTCTG...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 72 bp GAATGGACATTCAGATGCCAGCATGCACATTCCACTTaGCTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGC +
Preference number: 3 (lower is better)
Translates to: EWTFRCQHAHST*LRVKRLPVGVG
Trigger: GCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTCCATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 72 bp ATAAGGCAGCTGTATGAGACCCATGGAGAAACCCACTaGCAACTGGGAAAAGCATCCAACTGTGAGACAAGG +
Preference number: 3 (lower is better)
Translates to: IRQLYETHGETH*QLGKASNCETR
Trigger: CCTTGTCTCACAGTTGGATGCTTTTCCCAGTTGTCAGTGGGTTTCTCCATGGGTCTCATACAGCTGCCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 72 bp CTTAAAATCAAGGTATTGGCAGGACTGCATTCTTCTTaGGGCCCCAGAGGAGAAGAGGCTGTCTGCATTCCT +
Preference number: 3 (lower is better)
Translates to: LKIKVLAGLHSS*GPRGEEAVCIP
Trigger: AGGAATGCAGACAGCCTCTTCTCCTCTGGGGCCTCAAGAAGAATGCAGTCCTGCCAATACCTTGATTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 72 bp CTGGCCATCTCACATCCAAACCCTCAGCAATGGTTGTaGGTCAGTTCTGTTCCAGAATATCTGATGCCACTG +
Preference number: 3 (lower is better)
Translates to: LAISHPNPQQWL*VSSVPEYLMPL
Trigger: CAGTGGCATCAGATATTCTGGAACAGAACTGACTCACAACCATTGCTGAGGGTTTGGATGTGAGATGGCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp AAGGCTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTaGAAGGTGGGCTTCAGACACAGTGCTAGCATTTGT +
Preference number: 3 (lower is better)
Translates to: KASLAVPVNQRD*KVGFRHSASIC
Trigger: ACAAATGCTAGCACTGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAGCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp ATTGAGAGACAATTCCCCATGGTTCTCTCCTATTTCTaGACACTTGCCAGTAGAGGCACTGGTTGCCCTTGT +
Preference number: 3 (lower is better)
Translates to: IERQFPMVLSYF*TLASRGTGCPC
Trigger: ACAAGGGCAACCAGTGCCTCTACTGGCAAGTGTGCAGAAATAGGAGAGAACCATGGGGAATTGTCTCTCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp CAATCAGTAGGCGTGTGTTACAGCAGCACTCTAATTTaGGCACCACAATCTATATTCGTTTCCCGTGGCTGC +
Preference number: 3 (lower is better)
Translates to: QSVGVCYSSTLI*APQSIFVSRGC
Trigger: GCAGCCACGGGAAACGAATATAGATTGTGGTGCCCAAATTAGAGTGCTGCTGTAACACACGCCTACTGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTAGAGGCAGCATTTGTGTaGGAGCTTGAAGAAGTGGAT +
Preference number: 3 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLEAAFV*ELEEVD
Trigger: ATCCACTTCTTCAAGCTCCAACACAAATGCTGCCTC...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR-3UTR CAA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGGCATGCACATTCCACTaGACTAAGAGTAAAGAGGTT +
Preference number: 3 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMACTFH*TKSKEV
Trigger: AACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 72 bp GATCTAACTTACTGTCTCCACTTGGTCACTGTCATGTaGCCTCAGGCAGTACATACCTTCTCTTGCTCTCCA +
Preference number: 3 (lower is better)
Translates to: DLTYCLHLVTVM*PQAVHTFSCSP
Trigger: TGGAGAGCAAGAGAAGGTATGTACTGCCTGAGGTCACATGACAGTGACCAAGTGGAGACAGTAAGTTAGATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 72 bp GGGCCTCTAGAATTTGAAGCTTCTGATTTCTGGTTATaGGGCCAAAGATCCCAAAGGTCCTTCCAGACACCT +
Preference number: 3 (lower is better)
Translates to: GPLEFEASDFWL*GQRSQRSFQTP
Trigger: AGGTGTCTGGAAGGACCTTTGGGATCTTTGGCCTCATAACCAGAAATCAGAAGCTTCAAATTCTAGAGGCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp TCTCAAAATTCTTCCAGCCTCTGCCCATTTCCACGTTaGAATTCCAAAGCCACTTCAATCAGTAGGCGTGTG +
Preference number: 3 (lower is better)
Translates to: SQNSSSLCPFPR*NSKATSISRRV
Trigger: CACACGCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGGAAGAATTTTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp CTGAAATCAGTTTCACAGGGCTTAAAATCAAGGTATTaGCAGGACTGCATTCTTCTTGAGGCCCCAGAGGAG +
Preference number: 3 (lower is better)
Translates to: LKSVSQGLKSRY*QDCILLEAPEE
Trigger: CTCCTCTGGGGCCTCAAGAAGAATGCAGTCCTGCCAATACCTTGATTTTAAGCCCTGTGAAACTGATTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR TCA 72 bp TGCTTCCATTGTTACATACATTTTCTTCCGTCACTCTaGCACTCCTGCCTCCTTTACAGAGGCCCTTGTGAT +
Preference number: 3 (lower is better)
Translates to: CFHCYIHFLPSL*HSCLLYRGPCD
Trigger: ATCACAAGGGCCTCTGTAAAGGAGGCAGGAGTGTCAGAGTGACGGAAGAAAATGTATGTAACAATGGAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp TGGCTCTTCCTCCAGCAATTGCATCACTCTGACCTCTaGTTCCATTGTTACATACATTTTCTTCCGTCACTC +
Preference number: 3 (lower is better)
Translates to: WLFLQQLHHSDL*FHCYIHFLPSL
Trigger: GAGTGACGGAAGAAAATGTATGTAACAATGGAAGCAGAGGTCAGAGTGATGCAATTGCTGGAGGAAGAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp ACATCACTCTGTAGGAACTGCGGTTCAGGGAAGTGGTaGAAGAAAATGCTTTTACTCTGTCTACTGCCGTTA +
Preference number: 3 (lower is better)
Translates to: TSLCRNCGSGKW*KKMLLLCLLPL
Trigger: TAACGGCAGTAGACAGAGTAAAAGCATTTTCTTGCACCACTTCCCTGAACCGCAGTTCCTACAGAGTGATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp CTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTaGGCTTCAGACACAGTGCTAGCATTTGTAAACAAT +
Preference number: 3 (lower is better)
Translates to: LLLSLSIKETAR*ASDTVLAFVNN
Trigger: ATTGTTTACAAATGCTAGCACTGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp AGAAGCACCAGTAAGGTATTGAGAGACAATTCCCCATaGTTCTCTCCTATTTCTGCACACTTGCCAGTAGAG +
Preference number: 3 (lower is better)
Translates to: RSTSKVLRDNSP*FSPISAHLPVE
Trigger: CTCTACTGGCAAGTGTGCAGAAATAGGAGAGAACCATGGGGAATTGTCTCTCAATACCTTACTGGTGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 72 bp ACTCTGACACTCCTGCCTCCTTTACAGAGGCCCTTGTaGTTATACTCAGTTTACCTGAAAAATCCAGGATAC +
Preference number: 3 (lower is better)
Translates to: TLTLLPPLQRPL*LYSVYLKNPGY
Trigger: GTATCCTGGATTTTTCAGGTAAACTGAGTATAATCACAAGGGCCTCTGTAAAGGAGGCAGGAGTGTCAGAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp TTGAGTAAGATAATCCTGGAAGTACTTGGCGCAGGATaGACCATATTCTATAGGACCCTCCACTTGGTATCA +
Preference number: 3 (lower is better)
Translates to: LSKIILEVLGAG*TIFYRTLHLVS
Trigger: TGATACCAAGTGGAGGGTCCTATAGAATATGGTGCATCCTGCGCCAAGTACTTCCAGGATTATCTTACTCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp TCCAGTTATAAGATAAACCCCTGTAAATTAATGGCTTaGCCATGCAGCAGCAAGAACCAGTTAGGCCATCTC +
Preference number: 3 (lower is better)
Translates to: SSYKINPCKLMA*PCSSKNQLGHL
Trigger: GAGATGGCCTAACTGGTTCTTGCTGCTGCATGGGCAAGCCATTAATTTACAGGGGTTTATCTTATAACTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp GTAGGAACTGCGGTTCAGGGAAGTGGTGCAAGAAAATaGTTTTACTCTGTCTACTGCCGTTACTGTAAACAA +
Preference number: 3 (lower is better)
Translates to: VGTAVQGSGARK*FYSVYCRYCKQ
Trigger: TTGTTTACAGTAACGGCAGTAGACAGAGTAAAAGCATTTTCTTGCACCACTTCCCTGAACCGCAGTTCCTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CCA 72 bp ATTAGGTCACCATTTGTTAGTCTCTCAATACTTTACTaGCCATATCCCCCGATACCCCCACAGCAATTTCAC +
Preference number: 3 (lower is better)
Translates to: IRSPFVSLSILY*PYPPIPPQQFH
Trigger: GTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAATGGTGACCTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR GCA 72 bp GCAATTTATCATGACTCTCAAAATTCTTCCAGCCTCTaGCCATTTCCACGTTGCAATTCCAAAGCCACTTCA +
Preference number: 3 (lower is better)
Translates to: AIYHDSQNSSSL*PFPRCNSKATS
Trigger: TGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGGAAGAATTTTGAGAGTCATGATAAATTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp CTTATTATAAAAGACGTGGGTCCCCTAAATTCAGCATaGAGTTTCTCCACCGTAGTGCAACCCAATGCATAT +
Preference number: 3 (lower is better)
Translates to: LIIKDVGPLNSA*SFSTVVQPNAY
Trigger: ATATGCATTGGGTTGCACTACGGTGGAGAAACTGCATGCTGAATTTAGGGGACCCACGTCTTTTATAATAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR-3UTR CAA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTAACCTCAGCTCACCATaGCAACTACTCTGTGGGAAC +
Preference number: 3 (lower is better)
Translates to: EALVALVLNNLYKGDYYSNLSSP*QLLCGN
Trigger: GTTCCCACAGAGTAGTTGCAATGGTGAGCTGAGGTT...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR TCA 72 bp TCAGACACAGTGCTAGCATTTGTAAACAATTATCTGTaGGAATCAGCGGTCACTTTGTCCTGTGCTACCAAA +
Preference number: 3 (lower is better)
Translates to: SDTVLAFVNNYL*ESAVTLSCATK
Trigger: TTTGGTAGCACAGGACAAAGTGACCGCTGATTCTCACAGATAATTGTTTACAAATGCTAGCACTGTGTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR GCA 72 bp TCTGGAGGAAAGAGAGTCACCCCAGAAATACATCGATaGCTATATAGTGTTGTCTCTCTATCTTGGGTTTTT +
Preference number: 3 (lower is better)
Translates to: SGGKRVTPEIHR*LYSVVSLSWVF
Trigger: AAAAACCCAAGATAGAGAGACAACACTATATAGGCATCGATGTATTTCTGGGGTGACTCTCTTTCCTCCAGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTGGGGTTGCCATGAGCTaGAGGCCCAGCCCCGGGTAC +
Preference number: 4 (lower is better)
Translates to: PQHGTSGPPLPAPTQPVPGVAMS*RPSPGY
Trigger: GTACCCGGGGCTGGGCCTTCAGCTCATGGCAACCCC...AGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR TCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGCATCAGATGGACGCCTaGGGGCACTGGGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLHQMDA*GHWVLP
Trigger: AGGAAGGACCCAGTGCCCTCAGGCGTCCATCTGATG...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCGCCTTGCCCTGGTTGTaGACCCCCTTCGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLALPWL*TPFALP
Trigger: GGGGAGGGCGAAGGGGGTGCACAACCAGGGCAAGGC...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGGCAATGACTCGGCTCTaGGGGAGCTGGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGAMTRL*GSWLSR
Trigger: CCTGCTGAGCCAGCTCCCCCAGAGCCGAGTCATTGC...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGTGCTGTGACAGATGCTaGGTGGGAGGTGCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGCCDRC*VGGAGS
Trigger: GCTCCCGGCACCTCCCACCCAGCATCTGTCACAGCA...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp CTGGTGGTGGTGGGGAGGCTGTTCGAGTCTCTGGCTTaGGCCTCAGGAGCAAGGGAGGGGATAGGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LVVVGRLFESLA*ASGAREGIGQV
Trigger: CACCTGCCCTATCCCCTCCCTTGCTCCTGAGGCCAAAGCCAGAGACTCGAACAGCCTCCCCACCACCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTCCCTGCCTGAAAGGCTaGCCCACCCACCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSPCLKG*PTHPPA
Trigger: GGCTGGTGGGTGGGTGGGGCAGCCTTTCAGGCAGGG...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000448997.5
CDS-3UTR GCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCCCTGCCCTTCTGGGCTaGTTGGGCTGGCGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: GSGHISQDLRGLHSLDSIPALLG*LGWRGE
Trigger: CTCACCTCGCCAGCCCAAGCAGCCCAGAAGGGCAGG...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGCCACGATGTACTCACTaGATTCCCGGGCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLPRCTH*IPGPQG
Trigger: TCCCTGAGGCCCGGGAATCCAGTGAGTACATCGTGG...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGTGCACAGACCAGAGCTaGGGTGGAGGCCACAACCCT +
Preference number: 4 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGCTDQS*GGGHNP
Trigger: AGGGTTGTGGCCTCCACCCCAGCTCTGGTCTGTGCA...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTCAGAGTCCATGCAGCTaGGGCTGGGCACAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSQSPCS*GWAQGR
Trigger: CCTGCCCTGTGCCCAGCCCCAGCTGCATGGACTCTG...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCGTTGGCCAGGTGCAGTaGCTCACGGGACCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: GSGHISQDLRGLHSLDSIVGQVQ*LTGPGA
Trigger: AGCACCGGGTCCCGTGAGCCACTGCACCTGGCCAAC...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCGGGGTTGCCATGAGCTaGAGGCCCAGCCCCGGGTAC +
Preference number: 4 (lower is better)
Translates to: IPRYPHSNFTNTEQLPSAGVAMS*RPSPGY
Trigger: GTACCCGGGGCTGGGCCTTCAGCTCATGGCAACCCC...GGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCTGGTTGGGGTTGCCATaGGCTGAAGGCCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGWLGLP*AEGPAP
Trigger: CGGGGCTGGGCCTTCAGCTCATGGCAACCCCAACCA...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp ATCCCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTGAGGGAGATGGCTCCTaGTCCGCAGCCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: IPQHGTSGPPLPAPTQPVEGDGS*SAAHLQ
Trigger: CTGGAGGTGGGCTGCGGATCAGGAGCCATCTCCCTC...AACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGGGAT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR TCA 90 bp CACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCAGGTCAGGCCGGCTCTaGAGCCAGCTGCTGACAAGC +
Preference number: 4 (lower is better)
Translates to: HSMGPLGHLFQHPLNQFLRSGRL*SQLLTS
Trigger: GCTTGTCAGCAGCTGGCTTCAGAGCCGGCCTGACCT...GAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR TCA 90 bp ATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCTACCAAGCAGGGGACTaGCGGCCAGCCCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: IPRYPHSNFTNTEQLPSAYQAGD*RPALLG
Trigger: CCCCAGCAGGGCTGGCCGTCAGTCCCCTGCTTGGTA...GGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCTACCAAGCAGGGGACTaGCGGCCAGCCCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSYQAGD*RPALLG
Trigger: CCCCAGCAGGGCTGGCCGTCAGTCCCCTGCTTGGTA...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCGGCCAGGGCCCCACCTaGACCATCCAACCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPGQGPT*TIQPPG
Trigger: CCCAGGAGGTTGGATGGTTCAGGTGGGGCCCTGGCC...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCTTCCTAAGCCAGGCCTaGGGCTCCCATCGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: GSGHISQDLRGLHSLDSIFLSQA*GSHREW
Trigger: CCACTCCCGATGGGAGCCTCAGGCCTGGCTTAGGAA...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGCCAGCAGATGGTGACTaGATGCATGCCCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGPADGD*MHAPWP
Trigger: AGGCCATGGGGCATGCATTCAGTCACCATCTGCTGG...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp TCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCTGAGCCCCTGGAAGGCCGGCCTCAGGCTCTaGAATGGATTCCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: SGRGINTGGTILRLSPWKAGLRL*NGFPGL
Trigger: GAGGCCCGGGAATCCATTTCAGAGCCTGAGGCCGGC...CTTCCAGGGGCTCAGCCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR TCA 90 bp AACGTGGATGTGCGACCCAGGAACTGTGCAGCAAAGACCTCCAGACCCTCCCCTCTTGGGCTGGCGAGGTaGGGGTCCTGTGCTGACCTC +
Preference number: 4 (lower is better)
Translates to: NVDVRPRNCAAKTSRPSPLGLAR*GSCADL
Trigger: GAGGTCAGCACAGGACCCTCACCTCGCCAGCCCAAG...AGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCCCCTGCCTGAAAGGCTaGCCCACCCACCCACCAGCC +
Preference number: 4 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSPCLKG*PTHPPA
Trigger: GGCTGGTGGGTGGGTGGGGCAGCCTTTCAGGCAGGG...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000448997.5
CDS-3UTR GCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGCATAGGGAAAGGAGTTaGCCAAGGTCCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLHRERS*PRSHCR
Trigger: CCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATG...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCGCAGCTCAGAGTCCATaGAGCTGGGGCTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLAAQSP*SWGWAQ
Trigger: CTGTGCCCAGCCCCAGCTGCATGGACTCTGAGCTGC...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTGCTAGAGCCACTGGCTaGCCTGGCCTGGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSARATG*PGLGLK
Trigger: CTTGAGGCCCAGGCCAGGGCAGCCAGTGGCTCTAGC...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGCAAGTTGCAGCCTCCTaGCCCAGCCCCTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGQVAAS*PSPFFL
Trigger: CAGGAAAAAGGGGCTGGGGCAGGAGGCTGCAACTTG...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AACGTGGATGTGCGACCCAGGAACTGTGCAGCAAAGACCTCCAGACCCTCCCCTGGCAGCCACTTTCGCTaGCCTCTCCTGCCCCACACC +
Preference number: 4 (lower is better)
Translates to: NVDVRPRNCAAKTSRPSPGSHFR*PLLPHT
Trigger: GGTGTGGGGCAGGAGAGGGCAGCGAAAGTGGCTGCC...AGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGTCGTCCAGGCTGGAGTaGAGTGGTGCAATCTCCGCT +
Preference number: 4 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGSSRLE*SGAISA
Trigger: AGCGGAGATTGCACCACTGCACTCCAGCCTGGACGA...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGCTCCCCTGCGTTGTTTaGAGGAGAGGTCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLLPCVV*RRGLEE
Trigger: TTCCTCCAGACCTCTCCTGCAAACAACGCAGGGGAG...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGGGAAACCTCTTCCTTTaGGTGGCTCCCCTGCGTTGT +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLGNLFL*VAPLRC
Trigger: ACAACGCAGGGGAGCCACGCAAAGGAAGAGGTTTCC...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCCCCAGCCGGAGAAGCTaGCCCGAACTGGACGCCCGG +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALPSRRS*PELDAR
Trigger: CCGGGCGTCCAGTTCGGGGCAGCTTCTCCGGCTGGG...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000455834.5
CDS-3UTR CCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTGCCGGCTCCTGCTTGTaGCCCCAGCTGCCCCGACAG +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPAGSCL*PQLPRQ
Trigger: CTGTCGGGGCAGCTGGGGCCACAAGCAGGAGCCGGC...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGCTTGACATATGCTGGTaGTGGTGGGGAGGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLLDICW*WWGGCS
Trigger: CGAACAGCCTCCCCACCACCACCAGCATATGTCAAG...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGGCCCAGAGGGCTTTATaGGCCAGAATCCCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLAQRAL*ARIPGF
Trigger: AAACCCAGGGATTCTGGCCCATAAAGCCCTCTGGGC...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCATGTGGGGCACCTAACTaGCTCCTGAGGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPCGAPN*LLRPLW
Trigger: CCAGAGGGGCCTCAGGAGCCAGTTAGGTGCCCCACA...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGTCTGAAGGGCTGGGCTaGCCTGGGTGTGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRSEGLG*PGCGPS
Trigger: GCTGGGGCCACACCCAGGCCAGCCCAGCCCTTCAGA...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTGGAAGTCCCACTCTCCAAGGATGTACTGCACCGGCATCCTCTGCAATCGACGGAAGCTGCCCCGAACTaGACGCCCGGACGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: LEVPLSKDVLHRHPLQSTEAAPN*TPGRAW
Trigger: CCACGCACGTCCGGGCGTCCAGTTCGGGGCAGCTTC...CGTCGATTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR CAA 72 bp CAGCCTCACACTGACTTCCAGGAACAGCAGAGGGACTaGGACGCCTCTCCAGGCAGGCAGGCCTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QPHTDFQEQQRD*DASPGRQACSW
Trigger: CCAGGAACAGGCCTGCCTGCCTGGAGAGGCGTCCAAGTCCCTCTGCTGTTCCTGGAAGTCAGTGTGAGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCGGGGTTGCCATGAGCTaGAGGCCCAGCCCCGGGTAC +
Preference number: 4 (lower is better)
Translates to: THSTSSSVSGRGINTGGTGVAMS*RPSPGY
Trigger: GTACCCGGGGCTGGGCCTTCAGCTCATGGCAACCCC...GGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR TCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGTGGTTGGGGTTGCCATaGGCTGAAGGCCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRWLGLP*AEGPAP
Trigger: CGGGGCTGGGCCTTCAGCTCATGGCAACCCCAACCA...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCCTGGAAGTCCCACTCTCCAAGGATGTACTGCACCGGCATCCTCTGCAATCGATGGTTGGGGTTGCCATaGGCTGAAGGCCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: PWKSHSPRMYCTGILCNRWLGLP*AEGPAP
Trigger: CGGGGCTGGGCCTTCAGCTCATGGCAACCCCAACCA...TCGATTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR TCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCTGGTTGGGGTTGCCATaGGCTGAAGGCCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSWLGLP*AEGPAP
Trigger: CGGGGCTGGGCCTTCAGCTCATGGCAACCCCAACCA...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCCGTAGGGAGGGTTGCTaGCAATCAGGTCCATGGGGC +
Preference number: 4 (lower is better)
Translates to: GSGHISQDLRGLHSLDSIRREGC*QSGPWG
Trigger: GCCCCATGGACCTGATTGTCAGCAACCCTCCCTACG...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAATACCAAGCAGGGGACTaGCGGCCAGCCCTGCTGGGG +
Preference number: 4 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQYQAGD*RPALLG
Trigger: CCCCAGCAGGGCTGGCCGTCAGTCCCCTGCTTGGTA...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCGCCTACTCAGAGCACTaGTGGGGCCTTGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPAYSEH*WGLGRG
Trigger: GCCCCTCCCAAGGCCCCATCAGTGCTCTGAGTAGGC...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTGGCCATTGCTCAACTTaGATGGCTGCCTGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: PQHGTSGPPLPAPTQPVPGHCST*MAAWVG
Trigger: CCCGACCCAGGCAGCCATTCAAGTTGAGCAATGGCC...AGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR TCA 90 bp AACGTGGATGTGCGACCCAGGAACTGTGCAGCAAAGACCTCCAGACCCTCCCCTTGGCTGGGGGCTGGCTaGAGCCAAGAGCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: NVDVRPRNCAAKTSRPSPWLGAG*SQELQE
Trigger: TTCCTGGAGCTCTTGGCTTCAGCCAGCCCCCAGCCA...AGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCAGGCCAAGCTGACCCTTaGACCCAGGTGTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPGQADP*TQVSML
Trigger: GAGCATGGACACCTGGGTTCAAGGGTCAGCTTGGCC...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCGGGCCCACCCCACTGTaGCTGGCAGAGTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSGPTPL*LAESEG
Trigger: CCCTTCAGACTCTGCCAGTCACAGTGGGGTGGGCCC...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGGTCCCACCCAAGGGGTaGGGGAGCTGGGCATGTGTC +
Preference number: 4 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILVPPKG*GSWACV
Trigger: GACACATGCCCAGCTCCCTCACCCCTTGGGTGGGAC...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCTGAGCCCCTGGAAGTCCACAGGGCAGCCATaGTATGGCCCAGACCTCCGG +
Preference number: 4 (lower is better)
Translates to: SGRGINTGGTILRLSPWKSTGQP*YGPDLR
Trigger: CCGGAGGTCTGGGCCATAGCATGGCTGCCCTGTGGA...CTTCCAGGGGCTCAGCCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp AACGTGGATGTGCGACCCAGGAACTGTGCAGCAAAGACCTCCAGACCCTCCCCTCTGGGCAGAAAGTTGTaGCCGAGGCCGGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: NVDVRPRNCAAKTSRPSPLGRKL*PRPAPA
Trigger: AGCAGGAGCCGGCCTCGGGCACAACTTTCTGCCCAG...AGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCGCTAGAGCCACTGGCTaGCCTGGCCTGGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSARATG*PGLGLK
Trigger: CTTGAGGCCCAGGCCAGGGCAGCCAGTGGCTCTAGC...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGGGGCATCGAGAGTACTaGACAAAGGCTGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGGHREY*TKAEAQ
Trigger: CTGGGCTTCAGCCTTTGTGCAGTACTCTCGATGCCC...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGCCACACCTAGCGCTCTaGCTGGCCCCTTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWPHLAL*LAPLLW
Trigger: CCACAGCAAAGGGGCCAGGCAGAGCGCTAGGTGTGG...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTCCACACCTAGCGCTCTaGCTGGCCCCTTTGCTGTGG +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSPHLAL*LAPLLW
Trigger: CCACAGCAAAGGGGCCAGGCAGAGCGCTAGGTGTGG...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTGGGAGATCGCGCCACTaGACTCCAGTCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSGRSRH*TPVWAT
Trigger: TGTTGCCCAGACTGGAGTGCAGTGGCGCGATCTCCC...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTGCTGAGAGTGGCCCCTaGACCCAGCTGGGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: AWDLWATSSSTHSTSSSVAESGP*TQLGGD
Trigger: ATCTCCACCCAGCTGGGTCCAGGGGCCACTCTCAGC...AACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR CCA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCGCAATGACTCGGCTCTaGGGGAGCTGGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGAMTRL*GSWLSR
Trigger: CCTGCTGAGCCAGCTCCCCCAGAGCCGAGTCATTGC...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGGACGGCCAGCCCTGCTaGGGCAGAAGGAAACCCTTG +
Preference number: 4 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWDGQPC*GRRKPL
Trigger: CAAGGGTTTCCTTCTGCCCCAGCAGGGCTGGCCGTC...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ATCCCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTGACGGCCAGCCCTGCTaGGGCAGAAGGAAACCCTTG +
Preference number: 4 (lower is better)
Translates to: IPQHGTSGPPLPAPTQPVDGQPC*GRRKPL
Trigger: CAAGGGTTTCCTTCTGCCCCAGCAGGGCTGGCCGTC...AACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGGGAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGAGCCACTGGCTGCCCTaGCCTGGGCCTCAAGGCACT +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRSHWLP*PGPQGT
Trigger: AGTGCCTTGAGGCCCAGGCCAGGGCAGCCAGTGGCT...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGGACATATGCTGGTGGTaGTGGGGAGGCTGTTCGAGT +
Preference number: 4 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGDICWW*WGGCSS
Trigger: ACTCGAACAGCCTCCCCACCACCACCAGCATATGTC...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGGTTTGGGGCAAGGATTaGGAGCAGCCAATAGCCCAG +
Preference number: 4 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGVWGKD*EQPIAQ
Trigger: CTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAAC...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCGAGCTCCAGGAAACCTaGCGCCTGCTCCTACTGCCG +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSELQET*RLLLLP
Trigger: CGGCAGTAGGAGCAGGCGCCAGGTTTCCTGGAGCTC...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCGCCCCAAGCCTTGGCTaGGTGGGATGGTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSAPSLG*VGWCLQ
Trigger: CTGGAGACACCATCCCACCCAGCCAAGGCTTGGGGC...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCCTTTCCCCTTCACCCTaGAGCCCACGTTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLLSPSP*SPRWLW
Trigger: CCACAGCCAACGTGGGCTCCAGGGTGAAGGGGAAAG...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCTCAGGCTATGGGGGCTaGAGCAGTTGGGGCAGACCT +
Preference number: 4 (lower is better)
Translates to: GSGHISQDLRGLHSLDSISGYGG*SSWGRP
Trigger: AGGTCTGCCCCAACTGCTCCAGCCCCCATAGCCTGA...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGGCATTAGTACAGCTGTaGGCAGGGTTCCTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLALVQL*AGFLSQ
Trigger: CTGGCTTAGGAACCCTGCCCACAGCTGTACTAATGC...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGGTCCTCAGATATAGTTaGTTGCCACCCTGCCGGTCT +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLVLRYS*LPPCRS
Trigger: AGACCGGCAGGGTGGCAACCAACTATATCTGAGGAC...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434410.5
CDS-3UTR CCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCGAAGCTGCCCCGAACTaGACGCCCGGACGTGCGTGG +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALEAAPN*TPGRAW
Trigger: CCACGCACGTCCGGGCGTCCAGTTCGGGGCAGCTTC...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGGGGGTTGCCATGAGCTaGAGGCCCAGCCCCGGGTAC +
Preference number: 4 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMGVAMS*RPSPGY
Trigger: GTACCCGGGGCTGGGCCTTCAGCTCATGGCAACCCC...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTGGGGTTGCCATGAGCTaGAGGCCCAGCCCCGGGTAC +
Preference number: 4 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPGVAMS*RPSPGY
Trigger: GTACCCGGGGCTGGGCCTTCAGCTCATGGCAACCCC...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGAGGTCAGGCCGGCTCTaGAGCCAGCTGCTGACAAGC +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRRSGRL*SQLLTS
Trigger: GCTTGTCAGCAGCTGGCTTCAGAGCCGGCCTGACCT...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCCTGGAAGTCCCACTCTCCAAGGATGTACTGCACCGGCATCCTCTGCAATCGATCAGGCTGGCGGCACTaGCAAGGCATCCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: PWKSHSPRMYCTGILCNRSGWRH*QGIHRA
Trigger: TGCCCTGTGGATGCCTTGTCAGTGCCGCCAGCCTGA...TCGATTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR TCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCTCAGGGCAGCTACCCTaGGATGCTGCTGAAGACAGC +
Preference number: 4 (lower is better)
Translates to: GSGHISQDLRGLHSLDSISGQLP*DAAEDS
Trigger: GCTGTCTTCAGCAGCATCTCAGGGTAGCTGCCCTGA...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTGCTCTGGGCTCTGGCTaGAGGAGGCTGCACGGGCAG +
Preference number: 4 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPALGSG*RRLHGQ
Trigger: CTGCCCGTGCAGCCTCCTTCAGCCAGAGCCCAGAGC...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATGGGTCAGAGAGATAGCAGCTTCCCGCTTATCCACAGCAATGACTCGGCTCTGGCTCTGGGCTCTGGCTaGAGGAGGCTGCACGGGCAG +
Preference number: 4 (lower is better)
Translates to: MGQRDSSFPLIHSNDSALALGSG*RRLHGQ
Trigger: CTGCCCGTGCAGCCTCCTTCAGCCAGAGCCCAGAGC...CAGAGCCGAGTCATTGCTGTGGATAAGCGGGAAGCTGCTATCTCTCTGACCCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR TCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCTGGCTGGGGGCTGGCTaGAGCCAAGAGCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPWLGAG*SQELQE
Trigger: TTCCTGGAGCTCTTGGCTTCAGCCAGCCCCCAGCCA...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTTGCTCACGCCTCTCCTaGCTGGGATGTCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSCSRLS*LGCQRT
Trigger: AGTCCTCTGACATCCCAGTCAGGAGAGGCGTGAGCA...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTGGGGCCCACCCCACTGTaGCTGGCAGAGTCTGAAGGG +
Preference number: 4 (lower is better)
Translates to: PPQQFHQHRATALSHSDVGPTPL*LAESEG
Trigger: CCCTTCAGACTCTGCCAGTCACAGTGGGGTGGGCCC...CACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCCTTCTCCGGGGCCCCTaGGTCAGGTGCACAGTCAGG +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALLLRGP*VRCTVR
Trigger: CCTGACTGTGCACCTGACTCAGGGGCCCCGGAGAAG...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGCACCGGCATCCTCTaGAATCGACGGCTACTCAGC +
Preference number: 4 (lower is better)
Translates to: HSMGPLGHLFQHPLNQFLCTGIL*NRRLLS
Trigger: GCTGAGTAGCCGTCGATTGCAGAGGATGCCGGTGCA...GAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR GCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGTCTCCAAGGATGTACTaGACCGGCATCCTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLSPRMY*TGILCN
Trigger: ATTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGA...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTGCAGAAGGAAACCCTTaGCCCAGTGCTACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSAEGNP*PSATWE
Trigger: CTCCCAGGTAGCACTGGGGCAAGGGTTTCCTTCTGC...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCGCAGAAGGAAACCCTTaGCCCAGTGCTACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLAEGNP*PSATWE
Trigger: CTCCCAGGTAGCACTGGGGCAAGGGTTTCCTTCTGC...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTCAGATGAGCTTCCTGTaGTCGAGCCAGGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSQMSFL*SSQAWP
Trigger: TGGCCAAGCCTGGCTCGAGCACAGGAAGCTCATCTG...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCAATCAAGCCAGTGGCTaGAGGCTTGAGGCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSNQASG*RLEAPP
Trigger: AGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATT...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ATCCCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTAGGGGAGATGTAGGCTaGCAGGCTACCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: IPQHGTSGPPLPAPTQPVRGDVG*QATSLL
Trigger: CAGCAGGCTGGTAGCCTGGCAGCCTACATCTCCCCT...AACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCGGCGCCTGCTCCTACTaGCGCCAAGGACAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPGACSY*RQGQPV
Trigger: AACAGGCTGTCCTTGGCGGCAGTAGGAGCAGGCGCC...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGAGTCAGGGGCTGCTGTaGTCATTTCACAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLSQGLL*SFHRCS
Trigger: ACTGCATCTGTGAAATGAGCACAGCAGCCCCTGACT...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGCCACTTAGCCAGGCCTaGCTGCCACGGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: RSHPREGQILGLKSRLVWPLSQA*LPRGMA
Trigger: AGCCATGCCCCGTGGCAGGCAGGCCTGGCTAAGTGG...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTAGCCCTGGAAACCCTTaGTCCTGCTCCAAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSSPGNP*SCSKGP
Trigger: TGGACCCTTGGAGCAGGAGCAAGGGTTTCCAGGGCT...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCTCCAGCATGGCCAGCTaGTGGCTGTGTGACCTTGGG +
Preference number: 4 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGSSMAS*WLCDLG
Trigger: CCCAAGGTCACACAGCCAGCAGCTGGCCATGCTGGA...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGGTTGAGGCCCTGGGCTaGATTTGGCCTCGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILVEALG*IWPRQP
Trigger: AGGCTGCCGAGGCCAAATGCAGCCCAGGGCCTCAAC...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCTTCGCTGCCCTCTCCTaGCCCACACCTAGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPFAALS*PTPSAL
Trigger: CAGAGCGCTAGGTGTGGGGCAGGAGAGGGCAGCGAA...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCTTCGCTGCCCTCTCCTaGCCCACACCTAGCGCTCTG +
Preference number: 4 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSFAALS*PTPSAL
Trigger: CAGAGCGCTAGGTGTGGGGCAGGAGAGGGCAGCGAA...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCCAAGTCCATGAGTTCTaGAAGGCCAGGGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLQVHEF*KARAPP
Trigger: AGGTGGGGCCCTGGCCTTGCAGAACTCATGGACTTG...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCACCAGCCGGAGAAGCTaGCCCGAACTGGACGCCCGG +
Preference number: 4 (lower is better)
Translates to: GSSLQLNERGCATQELCSTSRRS*PELDAR
Trigger: CCGGGCGTCCAGTTCGGGGCAGCTTCTCCGGCTGGT...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp CCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTACCTCTGCCAGGGCCTaGCCAGTACACATTAGGAGC +
Preference number: 4 (lower is better)
Translates to: PQHGTSGPPLPAPTQPVPTSARA*PVHIRS
Trigger: GCTCCTAATGTGTACTGGGCAGGCCCTGGCAGAGGT...AGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp GAGCCCCTGGAAGTCCCACTCTCCAAGGATGTACTGCACCGGCATCCTCTGCAATCCTGTGCTGACCTCTaGCAGGGCCTGCCCAGTACA +
Preference number: 4 (lower is better)
Translates to: EPLEVPLSKDVLHRHPLQSCADL*QGLPST
Trigger: TGTACTGGGCAGGCCCTGGCAGAGGTCAGCACAGGA...TTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAGGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp GCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGAATAGACAGGTCTGGCGCCTaGCCTTCTGGGCTGCTTGGG +
Preference number: 4 (lower is better)
Translates to: ATSSSTHSTSSSVSGRGIDRSGA*PSGLLG
Trigger: CCCAAGCAGCCCAGAAGGGCAGGCGCCAGACCTGTC...TATTCCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTCCAGCCAGAGGTGGTTaGGGTTGCCATGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSPARGG*GCHELK
Trigger: CTTCAGCTCATGGCAACCCCAACCACCTCTGGCTGG...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCAGAGTCCATGCAGCTaGGGCTGGGCACAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPQSPCS*GWAQGR
Trigger: CCTGCCCTGTGCCCAGCCCCAGCTGCATGGACTCTG...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CTGCTCCATGTCCTGGTGGAAGACGTAGGGAGGGTTGCTGACAATCAGGTCCATTGGGGAGCCTTGCCCTaGTTGTGCACCCCCTTCGCC +
Preference number: 4 (lower is better)
Translates to: LLHVLVEDVGRVADNQVHWGALP*LCTPFA
Trigger: GGCGAAGGGGGTGCACAACCAGGGCAAGGCTCCCCA...ATGGACCTGATTGTCAGCAACCCTCCCTACGTCTTCCACCAGGACATGGAGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp ATCCCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTGGGGGACTAAGGAAGTaGGGAGCCTTGCCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: IPQHGTSGPPLPAPTQPVGGLRK*GALPWL
Trigger: CAACCAGGGCAAGGCTCCCCACTTCCTTAGTCCCCC...AACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCGCCGGCTCCTGCTTGTaGCCCCAGCTGCCCCGACAG +
Preference number: 4 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGAGSCL*PQLPRQ
Trigger: CTGTCGGGGCAGCTGGGGCCACAAGCAGGAGCCGGC...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCGCCGGCTCCTGCTTGTaGCCCCAGCTGCCCCGACAG +
Preference number: 4 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPAGSCL*PQLPRQ
Trigger: CTGTCGGGGCAGCTGGGGCCACAAGCAGGAGCCGGC...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCGCCAGGCACATCCCATaGGCTCCTCACATGCATCCT +
Preference number: 4 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLARHIP*APHMHP
Trigger: AGGATGCATGTGAGGAGCCCATGGGATGTGCCTGGC...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCAGCCACTGGCTGCCCTaGCCTGGGCCTCAAGGCACT +
Preference number: 4 (lower is better)
Translates to: THSTSSSVSGRGINTGGTSHWLP*PGPQGT
Trigger: AGTGCCTTGAGGCCCAGGCCAGGGCAGCCAGTGGCT...GGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTTCGAGTCTCTGGCTTTaGCCTCAGGAGCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSSSLWL*PQEQGR
Trigger: CCTCCCTTGCTCCTGAGGCCAAAGCCAGAGACTCGA...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCAGGCTGCACGGGCAGTaGGCACATCTCTCAAGACCT +
Preference number: 4 (lower is better)
Translates to: GSGHISQDLRGLHSLDSIRLHGQ*AHLSRP
Trigger: AGGTCTTGAGAGATGTGCCCACTGCCCGTGCAGCCT...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGAAGGCCAGGTCCTCATaGCTTCCCATCCCTAATGAC +
Preference number: 4 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGKARSS*LPIPND
Trigger: GTCATTAGGGATGGGAAGCCATGAGGACCTGGCCTT...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCTCTGGACCCAGTCTCTaGAGATGGGCCATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGSGPSL*RWAMEA
Trigger: GGCCTCCATGGCCCATCTCCAGAGACTGGGTCCAGA...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAAGCCAGAGAAGAGACCTaGCTCGTGCCCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQAREET*LVPQPC
Trigger: GCAGGGCTGGGGCACGAGCCAGGTCTCTTCTCTGGC...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTGCCACCTCCAGACCCTaGACAAGTTGCAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSATSRP*TSCSLL
Trigger: CAGGAGGCTGCAACTTGTCCAGGGTCTGGAGGTGGC...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGGACTGTGTCCCCACATaGTCACATTTGCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLDCVPT*SHLHLQ
Trigger: CTGGAGATGCAAATGTGACCATGTGGGGACACAGTC...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCGCCCTGGGCTGCATTTaGCCTCGGCAGCCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCALGCI*PRQPAH
Trigger: GTGAGCAGGCTGCCGAGGCCAAATGCAGCCCAGGGC...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGTGTGGGGCACCTAACTaGCTCCTGAGGCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRCGAPN*LLRPLW
Trigger: CCAGAGGGGCCTCAGGAGCCAGTTAGGTGCCCCACA...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCGTGGGCGTGAAAATCTaGCACCCGGGCCGACAGGGA +
Preference number: 4 (lower is better)
Translates to: IPRYPHSNFTNTEQLPSAVGVKI*HPGRQG
Trigger: TCCCTGTCGGCCCGGGTGCCAGATTTTCACGCCCAC...GGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCACCTCCGGGAAGGGAATaGTCACGTGGGGCATCAAGT +
Preference number: 4 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPPPGRE*SRGASS
Trigger: ACTTGATGCCCCACGTGACCATTCCCTTCCCGGAGG...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCGGGGGCTGGAGCAGTTaGGGCAGACCTCCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLGGWSS*GRPPGR
Trigger: CCTTCCCGGAGGTCTGCCCCAACTGCTCCAGCCCCC...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGGGGGAGAAATGGGTaGGCTCAGCAGGACAGGTCT +
Preference number: 4 (lower is better)
Translates to: HSMGPLGHLFQHPLNQFLWGRNG*AQQDRS
Trigger: AGACCTGTCCTGCTGAGCCCACCCATTTCTCCCCCA...GAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR CAA 72 bp AGCAGAGTCAAGCTGCACATTTTTCTGGGCAGAAAGTaGTGCCCGAGGCCGGCTCCTGCTTGTGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: SRVKLHIFLGRK*CPRPAPACGPS
Trigger: GCTGGGGCCACAAGCAGGAGCCGGCCTCGGGCACAACTTTCTGCCCAGAAAAATGTGCAGCTTGACTCTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 72 bp AAGGACTCGTCCCAGATGCTGTGTCCTCGCCTGACCTaGTATTCTGCCCCACCTAGTGGCCCTAAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: KDSSQMLCPRLT*YSAPPSGPKGG
Trigger: GCCTCCCTTAGGGCCACTAGGTGGGGCAGAATACAAGGTCAGGCGAGGACACAGCATCTGGGACGAGTCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp AGCTGGGAGGAGCCTGTGGTTAGTTCCCAGGCGGGTTaGCTGGGAGAATCACCAGCCTCCATTTCCCAGAGG +
Preference number: 4 (lower is better)
Translates to: SWEEPVVSSQAG*LGESPASISQR
Trigger: CCTCTGGGAAATGGAGGCTGGTGATTCTCCCAGCAAACCCGCCTGGGAACTAACCACAGGCTCCTCCCAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp ACAGGACCTTGTTGGGCCTTCGGAGGAGAAGTAGGGTaGGGGGCAGGTGGTGACTCTGGCAGAGGCTCTGTT +
Preference number: 4 (lower is better)
Translates to: TGPCWAFGGEVG*GAGGDSGRGSV
Trigger: AACAGAGCCTCTGCCAGAGTCACCACCTGCCCCCAACCCTACTTCTCCTCCGAAGGCCCAACAAGGTCCTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp TCCCAGCTACTCGGGAGGCTGAGCCAAGAGAATCGCTaGAACCTGGGAGATCGCGCCACTGCACTCCAGTCT +
Preference number: 4 (lower is better)
Translates to: SQLLGRLSQENR*NLGDRATALQS
Trigger: AGACTGGAGTGCAGTGGCGCGATCTCCCAGGTTCAAGCGATTCTCTTGGCTCAGCCTCCCGAGTAGCTGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp CTTCAGTTGGGAGCTGGCAGAAAACACAAGCCACGGTaGTCCCACCCAAGGGGTGAGGGAGCTGGGCATGTG +
Preference number: 4 (lower is better)
Translates to: LQLGAGRKHKPR*SHPRGEGAGHV
Trigger: CACATGCCCAGCTCCCTCACCCCTTGGGTGGGACAACCGTGGCTTGTGTTTTCTGCCAGCTCCCAACTGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTGAGGGAGATGGCTCCTaGTCCGCAGCCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPEGDGS*SAAHLQ
Trigger: CTGGAGGTGGGCTGCGGATCAGGAGCCATCTCCCTC...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACGAGGGAGATGGCTCCTaGTCCGCAGCCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHEGDGS*SAAHLQ
Trigger: CTGGAGGTGGGCTGCGGATCAGGAGCCATCTCCCTC...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp CCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTGAGGTCAGGCCGGCTCTaGAGCCAGCTGCTGACAAGC +
Preference number: 4 (lower is better)
Translates to: PPQQFHQHRATALSHSDVRSGRL*SQLLTS
Trigger: GCTTGTCAGCAGCTGGCTTCAGAGCCGGCCTGACCT...CACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGGTCAGGCCGGCTCTaGAGCCAGCTGCTGACAAGC +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALRSGRL*SQLLTS
Trigger: GCTTGTCAGCAGCTGGCTTCAGAGCCGGCCTGACCT...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTATCCAAGGCCAGGAGTaGGGACTCACGTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSIQGQE*GLTCLP
Trigger: AGGAAGGCACGTGAGTCCTCACTCCTGGCCTTGGAT...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCAGCAGGCAGTCATCCTTaGGCCAAAACGCAGATGAGC +
Preference number: 4 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPAGSHP*AKTQMS
Trigger: GCTCATCTGCGTTTTGGCTCAAGGATGACTGCCTGC...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCGAAGCCAAGGCTGAGTaGGGTGAAGTCATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: GSGHISQDLRGLHSLDSIEAKAE*GEVICP
Trigger: TGGGCAGATGACTTCACCTCACTCAGCCTTGGCTTC...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGGCTTCTCGGATATTCTaGAGGCATCCTACACTGTCA +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLASRIF*RHPTLS
Trigger: TGACAGTGTAGGATGCCTTCAGAATATCCGAGAAGC...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGCAAGGAAGGGATCCCTaGTGTGCCAACAGATGGATT +
Preference number: 4 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGQGRDP*CANRWI
Trigger: AATCCATCTGTTGGCACATCAGGGATCCCTTCCTTG...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGACCTTTGCTGTGGGCGTaGAAATCTGGCACCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGPLLWA*KSGTRA
Trigger: GGCCCGGGTGCCAGATTTTCACGCCCACAGCAAAGG...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCCTGAGCTCGGGTaGTCTGCCTGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: IPRYPHSNFTNTEQLPSATPELG*SACFSL
Trigger: GAGGCTGAAGCAGGCAGATCACCCGAGCTCAGGAGT...GGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCCTGGTCTTGAACTCCTaGGCTCGGGTGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSLVLNS*ARVICL
Trigger: CAGGCAGATCACCCGAGCTCAGGAGTTCAAGACCAG...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCGTGAGACAGGCCAGATaGCAGCCTCAGTTACCCCTT +
Preference number: 4 (lower is better)
Translates to: GSGHISQDLRGLHSLDSIVRQAR*QPQLPL
Trigger: AAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCAC...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAAGGACCCAGCTACTCATaGGGGGCCTGTCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQGPSYS*GACQEE
Trigger: CTCCTCCTGACAGGCCCCTCATGAGTAGCTGGGTCC...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTGGCTCTGCGCTCCCATaGCTTGGAGGCAGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPGSALP*LGGSGW
Trigger: CCAACCACTGCCTCCAAGTCATGGGAGCGCAGAGCC...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGTTGGGGGCAGGTGGTaGCTCTGGCAGAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: PIPPQQFHQHRATALSHSVGGRW*LWQRLC
Trigger: ACAGAGCCTCTGCCAGAGTCACCACCTGCCCCCAAC...AGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGGGCCTGGCACCCAGTTaGTGGTGCTCAGGGTACAGA +
Preference number: 4 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILGLAPS*WCSGYR
Trigger: TCTGTACCCTGAGCACCATCAACTGGGTGCCAGGCC...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGTTCCTAAGCCAGGCCTaGGGCTCCCATCGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: RSHPREGQILGLKSRLVWFLSQA*GSHREW
Trigger: CCACTCCCGATGGGAGCCTCAGGCCTGGCTTAGGAA...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCCCTTCCGCTTGGCTGTaGGTTGTATTCTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLPSAWL*VVFSCP
Trigger: TGGGCAGGAGAATACAACTCACAGCCAAGCGGAAGG...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCAATAGCAAGTGCACTTaGCAGGGAGGGACCAGAGGC +
Preference number: 4 (lower is better)
Translates to: GSGHISQDLRGLHSLDSINSKCT*QGGTRG
Trigger: GCCTCTGGTCCCTCCCTGTCAAGTGCACTTGCTATT...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGAATCGGGGTCTTCATAGCTaGGGATCTCAGGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GHLFQHPLNQFLCFWPRNRGLHS*GSQGPA
Trigger: AGCTGGCCCCTGAGATCCGCAGCTATGAAGACCCCG...ATTCCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTTTTCAGGAGCCGGGGTaGCAAGGCCAGAATGTGGGT +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSFQEPG*QGQNVG
Trigger: ACCCACATTCTGGCCTTGGCACCCCGGCTCCTGAAA...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTTCCACAGGGCAGCCATaGTATGGCCCAGACCTCCGG +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPSTGQP*YGPDLR
Trigger: CCGGAGGTCTGGGCCATAGCATGGCTGCCCTGTGGA...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp CCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTTCCACAGGGCAGCCATaGTATGGCCCAGACCTCCGG +
Preference number: 4 (lower is better)
Translates to: PIPPQQFHQHRATALSHSSTGQP*YGPDLR
Trigger: CCGGAGGTCTGGGCCATAGCATGGCTGCCCTGTGGA...AGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp CCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTGTCCACAGGGCAGCCATaGTATGGCCCAGACCTCCGG +
Preference number: 4 (lower is better)
Translates to: PPQQFHQHRATALSHSDVSTGQP*YGPDLR
Trigger: CCGGAGGTCTGGGCCATAGCATGGCTGCCCTGTGGA...CACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCCTGGGCTCTGGAAAGTaGCATCCACCTCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPLGSGK*HPPPLW
Trigger: CCAGAGGGGAGGTGGATGGCACTTTCCAGAGCCCAG...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp GCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGAATAACTGACGGCCAGCCCTaGTGGGGCAGAAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: ATSSSTHSTSSSVSGRGITDGQP*WGRRKP
Trigger: GGGTTTCCTTCTGCCCCAGCAGGGCTGGCCGTCAGT...TATTCCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTCATAGGGAAAGGAGTTaGCCAAGGTCCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSHRERS*PRSHCR
Trigger: CCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATG...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCGCAGCTCAGAGTCCATaGAGCTGGGGCTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPAAQSP*SWGWAQ
Trigger: CTGTGCCCAGCCCCAGCTGCATGGACTCTGAGCTGC...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCGCTTGTGGCCCCAGCTaGCCCGACAGTGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALACGPS*PDSVTL
Trigger: GAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAGC...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp TCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCTGAGCCCCAATCAAGCCAGTGGCTaGAGGCTTGAGGCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: SVSGRGINTGGTILRLSPNQASG*RLEAPP
Trigger: AGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATT...GGGGCTCAGCCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCCCCTTCTTTCCAGACTaGCTTGTATCCCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLPFFPD*LVSLPA
Trigger: GGCAGGCAGGGATACAAGGCAGTCTGGAAAGAAGGG...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCAGGGGAGATGTAGGCTaGCAGGCTACCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: IPRYPHSNFTNTEQLPSARGDVG*QATSLL
Trigger: CAGCAGGCTGGTAGCCTGGCAGCCTACATCTCCCCT...GGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCCTGGCTGAAGGAGGCTaGACGGGCAGTGGGCACATC +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALLAEGG*TGSGHI
Trigger: GATGTGCCCACTGCCCGTGCAGCCTCCTTCAGCCAG...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTGGGCGCCTGCTCCTACTaGCGCCAAGGACAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: PPQQFHQHRATALSHSDVGACSY*RQGQPV
Trigger: AACAGGCTGTCCTTGGCGGCAGTAGGAGCAGGCGCC...CACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp TGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTAGGAAACCTGGCGCCTaGTCCTACTGCCGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: WDLWATSSSTHSTSSSVSRKPGA*SYCRQG
Trigger: TCCTTGGCGGCAGTAGGAGCAGGCGCCAGGTTTCCT...AGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCGTTGAGGCCCTGGGCTaGATTTGGCCTCGGCAGCCT +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCVEALG*IWPRQP
Trigger: AGGCTGCCGAGGCCAAATGCAGCCCAGGGCCTCAAC...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCGCCAGCAGCCTCCTCTaGCCTTGGAGGGCGCACAGG +
Preference number: 4 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPASSLL*PWRAHR
Trigger: CCTGTGCGCCCTCCAAGGGCAGAGGAGGCTGCTGGC...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCTTGCCTCGGGCACAGTaGTCCAGGTCTCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: SVHATHIRSTSESGFSGSLPRAQ*SRSPPT
Trigger: TGTGGGAGGAGACCTGGAGCACTGTGCCCGAGGCAA...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATCCCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCTGGACCCAGCTGGGTaGAGATGGAGAGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: IPQHGTSGPPLPAPTQPVLDPAG*RWRGHK
Trigger: CTTGTGACCTCTCCATCTCCACCCAGCTGGGTCCAG...AACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR CCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCCTGGACCCAGCTGGGTaGAGATGGAGAGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSLDPAG*RWRGHK
Trigger: CTTGTGACCTCTCCATCTCCACCCAGCTGGGTCCAG...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGGCTGAGAGTGGCCCCTaGACCCAGCTGGGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: RSHPREGQILGLKSRLVWAESGP*TQLGGD
Trigger: ATCTCCACCCAGCTGGGTCCAGGGGCCACTCTCAGC...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AACGTGGATGTGCGACCCAGGAACTGTGCAGCAAAGACCTCCAGACCCTCCCCTCCAGCCAGAGGTGGTTaGGGTTGCCATGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: NVDVRPRNCAAKTSRPSPPARGG*GCHELK
Trigger: CTTCAGCTCATGGCAACCCCAACCACCTCTGGCTGG...AGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CTGGGGATCCCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAAAAGACCCCAGTCCAGTaGCTGACCAGTTCTATGGCA +
Preference number: 4 (lower is better)
Translates to: LGIPQHGTSGPPLPAPTQKTPVQ*LTSSMA
Trigger: TGCCATAGAACTGGTCAGCCACTGGACTGGGGTCTT...TTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGGGATCCCCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR CCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGCCACGATGTACTCACTaGATTCCCGGGCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWPRCTH*IPGPQG
Trigger: TCCCTGAGGCCCGGGAATCCAGTGAGTACATCGTGG...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGCTTAGGCTGAGCCCCTaGAAGTCCCACTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWLRLSP*KSHSPR
Trigger: CCTTGGAGAGTGGGACTTCCAGGGGCTCAGCCTAAG...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp TCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCTGAGCCCCTGGAAGCTTAGGCTGAGCCCCTaGAAGTCCCACTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SGRGINTGGTILRLSPWKLRLSP*KSHSPR
Trigger: CCTTGGAGAGTGGGACTTCCAGGGGCTCAGCCTAAG...CTTCCAGGGGCTCAGCCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR CCA 90 bp AACGTGGATGTGCGACCCAGGAACTGTGCAGCAAAGACCTCCAGACCCTCCCCTAGGGCAGCCATGCTATaGCCCAGACCTCCGGATATG +
Preference number: 4 (lower is better)
Translates to: NVDVRPRNCAAKTSRPSPRAAML*PRPPDM
Trigger: CATATCCGGAGGTCTGGGCCATAGCATGGCTGCCCT...AGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGTGCACAGACCAGAGCTaGGGTGGAGGCCACAACCCT +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRCTDQS*GGGHNP
Trigger: AGGGTTGTGGCCTCCACCCCAGCTCTGGTCTGTGCA...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCGTTGCCAGTTGGCGTTaGCCCTGGACTCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGVASWR*PWTQKS
Trigger: GCTCTTCTGAGTCCAGGGCCAACGCCAACTGGCAAC...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCAGGACACTGGGGCACTaGGAGCTGCAGTGTGACCTC +
Preference number: 4 (lower is better)
Translates to: IPRYPHSNFTNTEQLPSARTLGH*ELQCDL
Trigger: GAGGTCACACTGCAGCTCCCAGTGCCCCAGTGTCCT...GGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCTGGGGAGCCTTGCCCTaGTTGTGCACCCCCTTCGCC +
Preference number: 4 (lower is better)
Translates to: GSSLQLNERGCATQELCSWGALP*LCTPFA
Trigger: GGCGAAGGGGGTGCACAACCAGGGCAAGGCTCCCCA...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGCACTGCACTCTCTTCTaGTGCAACATCCACAAGCTC +
Preference number: 4 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGHCTLF*CNIHKL
Trigger: GAGCTTGTGGATGTTGCACCAGAAGAGAGTGCAGTG...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTGTCCCATGCATCAGATaGACGCCTGAGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATVPCIR*TPEGTG
Trigger: CCCAGTGCCCTCAGGCGTCCATCTGATGCATGGGAC...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTTGGGCCTCAAGGCACTaGGGCCATAGTGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATWASRH*GHSEER
Trigger: CCTCTCCTCACTATGGCCCCAGTGCCTTGAGGCCCA...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTAGCCACTGGCTGCCCTaGCCTGGGCCTCAAGGCACT +
Preference number: 4 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPSHWLP*PGPQGT
Trigger: AGTGCCTTGAGGCCCAGGCCAGGGCAGCCAGTGGCT...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATCCCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTAGGCTGCACGGGCAGTaGGCACATCTCTCAAGACCT +
Preference number: 4 (lower is better)
Translates to: IPQHGTSGPPLPAPTQPVRLHGQ*AHLSRP
Trigger: AGGTCTTGAGAGATGTGCCCACTGCCCGTGCAGCCT...AACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGGGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTATGCTCTGGGCTCTaGCTGAAGGAGGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATLCSGL*LKEAAR
Trigger: CCGTGCAGCCTCCTTCAGCCAGAGCCCAGAGCATAG...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTCTCCTGTCTATGCTCTaGGCTCTGGCTGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: TAWDLWATSSSTHSTSSSLLSML*ALAEGG
Trigger: GCCTCCTTCAGCCAGAGCCCAGAGCATAGACAGGAG...AGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTCCTGTTCTCCTGGTGTaGCTGTTGCGCAGGGATCAG +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSPVLLV*LLRRDQ
Trigger: CTGATCCCTGCGCAACAGCCACACCAGGAGAACAGG...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCGACAGCCTGTTCTCCTaGTGTGGCTGTTGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPDSLFS*CGCCAG
Trigger: CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTC...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGCTCTGCTCAGGCCTATaGCTTACATGGAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWLCSGL*LTWRGQ
Trigger: CTGGCCCCTCCATGTAAGCCATAGGCCTGAGCAGAG...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGCCCCAAGCCTTGGCTaGGTGGGATGGTGTCTCCAG +
Preference number: 4 (lower is better)
Translates to: PIPPQQFHQHRATALSHSAPSLG*VGWCLQ
Trigger: CTGGAGACACCATCCCACCCAGCCAAGGCTTGGGGC...AGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGCATGAGGCCCATGTCTaGCCTCCCAGTAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWHEAHV*PPSSSP
Trigger: TGGAGAGCTACTGGGAGGCCAGACATGGGCCTCATG...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGATGAGAGCATCATACTaGGAGTCAGGAGTCAAGTGC +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLMRASY*ESGVKC
Trigger: GCACTTGACTCCTGACTCCCAGTATGATGCTCTCAT...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACGCCAGAGAAGAGACCTaGCTCGTGCCCCAGCCCTGC +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHAREET*LVPQPC
Trigger: GCAGGGCTGGGGCACGAGCCAGGTCTCTTCTCTGGC...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCGAGAGACTGAGGCCCTaGCCCTATACCTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: GSGHISQDLRGLHSLDSIERLRP*PYTSGD
Trigger: ATCTCCTGAGGTATAGGGCCAGGGCCTCAGTCTCTC...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCGGCCCACTGTGGTCCTaGCCATCTCACATCCAAACC +
Preference number: 4 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGGPLWS*PSHIQT
Trigger: GGTTTGGATGTGAGATGGCCAGGACCACAGTGGGCC...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AACGTGGATGTGCGACCCAGGAACTGTGCAGCAAAGACCTCCAGACCCTCCCCTGGCCCACTGTGGTCCTaGCCATCTCACATCCAAACC +
Preference number: 4 (lower is better)
Translates to: NVDVRPRNCAAKTSRPSPGPLWS*PSHIQT
Trigger: GGTTTGGATGTGAGATGGCCAGGACCACAGTGGGCC...AGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCAGCATGGCCAGCTGCTaGCTGTGTGACCTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSSMASC*LCDLGH
Trigger: ATGCCCAAGGTCACACAGCCAGCAGCTGGCCATGCT...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGGGGAGCCTCAGGCTATaGGGGCTGGAGCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMGSLRL*GLEQLG
Trigger: CCCCAACTGCTCCAGCCCCCATAGCCTGAGGCTCCC...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGTGCTGTGACAGATGCTaGGTGGGAGGTGCCGGGAGC +
Preference number: 4 (lower is better)
Translates to: RSHPREGQILGLKSRLVWCCDRC*VGGAGS
Trigger: GCTCCCGGCACCTCCCACCCAGCATCTGTCACAGCA...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCCAGTCTTTCCACCCTTaGAGGCACCACCAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSQSFHP*RHHQGP
Trigger: AGGCCCTTGGTGGTGCCTCCAAGGGTGGAAAGACTG...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCCCTCACGGAGGCTGTTaGCAGGAAAGGACTCGTCCC +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPPHGGC*QERTRP
Trigger: GGGACGAGTCCTTTCCTGCCAACAGCCTCCGTGAGG...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACGTTGGCCAGGTGCAGTaGCTCACGGGACCCGGTGCT +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHVGQVQ*LTGPGA
Trigger: AGCACCGGGTCCCGTGAGCCACTGCACCTGGCCAAC...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCCCAGGCGGGTTTGCTaGGAGAATCACCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATPRRVC*ENHQPP
Trigger: TGGAGGCTGGTGATTCTCCCAGCAAACCCGCCTGGG...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTGCTGGGAGGAGCCTGTaGTTAGTTCCCAGGCGGGTT +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATAGRSL*LVPRRV
Trigger: AACCCGCCTGGGAACTAACCACAGGCTCCTCCCAGC...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCTCTGAAGGGCTGGGCTaGCCTGGGTGTGGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: GNHRTLGNAIRTWALESASEGLG*PGCGPS
Trigger: GCTGGGGCCACACCCAGGCCAGCCCAGCCCTTCAGA...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCCCACCCCACTGTGACTaGCAGAGTCTGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: SVHATHIRSTSESGFSGSPPHCD*QSLKGW
Trigger: CCAGCCCTTCAGACTCTGCCAGTCACAGTGGGGTGG...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGCTCTGCACTAGGGGATaGACGCAAGCTGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILLCTRG*TQAGCP
Trigger: GGGACAGCCAGCTTGCGTCCATCCCCTAGTGCAGAG...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCATGGCGCCTGCCCTTCTaGGCTGCTTGGGCTGGCGAG +
Preference number: 4 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRAWRLPF*AAWAGE
Trigger: CTCGCCAGCCCAAGCAGCCCAGAAGGGCAGGCGCCA...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR TCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTGCCGGCCTCAGGCTCTaGAATGTTTTGGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATAGLRL*NVLAPR
Trigger: CCTTGGAGCCAAAACATTTCAGAGCCTGAGGCCGGC...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000455834.5
CDS-3UTR TCA 90 bp ATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCGCTTATCCACAGCAATaGCTCGGCTCTGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: IPRYPHSNFTNTEQLPSAAYPQQ*LGSGGA
Trigger: AGCTCCCCCAGAGCCGAGTCATTGCTGTGGATAAGC...GGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCATGTCCAGCTCCTTTCTaGGGTCATGTCGAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPCPAPF*GHVEVD
Trigger: ATCCACCTCGACATGACCTCAGAAAGGAGCTGGACA...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGAATACGTAGGGAGGGTTGCTaGCAATCAGGTCCATGGGGC +
Preference number: 4 (lower is better)
Translates to: ATSSSTHSTSSSVSGRGIRREGC*QSGPWG
Trigger: GCCCCATGGACCTGATTGTCAGCAACCCTCCCTACG...TATTCCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR TCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACAGGTCAGGCCGGCTCTaGAGCCAGCTGCTGACAAGC +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHRSGRL*SQLLTS
Trigger: GCTTGTCAGCAGCTGGCTTCAGAGCCGGCCTGACCT...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTATCAATCCCTGGGAGTaGGCTGCTCTATGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSINPWE*AALCQD
Trigger: GTCCTGGCATAGAGCAGCTCACTCCCAGGGATTGAT...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp ATCCCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTGCAGGCAGTCATCCTTaGGCCAAAACGCAGATGAGC +
Preference number: 4 (lower is better)
Translates to: IPQHGTSGPPLPAPTQPVAGSHP*AKTQMS
Trigger: GCTCATCTGCGTTTTGGCTCAAGGATGACTGCCTGC...AACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR TCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCATTTCCTGTCGCTGTTaGCAGGAAGGCTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: GSGHISQDLRGLHSLDSIISCRC*QEGWIC
Trigger: GCAGATCCAGCCTTCCTGTCAACAGCGACAGGAAAT...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGAATTCAGGGCAGCTACCCTaGGATGCTGCTGAAGACAGC +
Preference number: 4 (lower is better)
Translates to: GHLFQHPLNQFLCFWPRNSGQLP*DAAEDS
Trigger: GCTGTCTTCAGCAGCATCTCAGGGTAGCTGCCCTGA...ATTCCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR TCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCCCTGCAAGTGCTCCTTaGCATATGCTGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSPASAP*HMLVVV
Trigger: CACCACCACCAGCATATGTCAAGGAGCACTTGCAGG...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGGCAATTGCATCACTCTaGCCTCTGCTTCCATTGTTA +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLAIASL*PLLPLL
Trigger: TAACAATGGAAGCAGAGGTCAGAGTGATGCAATTGC...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTGGACTGCATTCTTCTTaGGGCCCCAGAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSGLHSS*GPRGEE
Trigger: CTCTTCTCCTCTGGGGCCTCAAGAAGAATGCAGTCC...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp AACGTGGATGTGCGACCCAGGAACTGTGCAGCAAAGACCTCCAGACCCTCCCCTGGACTGCATTCTTCTTaGGGCCCCAGAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: NVDVRPRNCAAKTSRPSPGLHSS*GPRGEE
Trigger: CTCTTCTCCTCTGGGGCCTCAAGAAGAATGCAGTCC...AGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTGATTTGGGGCCAAGCTaGCCCTTGAACCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATDLGPS*PLNPGV
Trigger: GACACCTGGGTTCAAGGGTCAGCTTGGCCCCAAATC...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGGCAACTGCACCCTGCTaGGCCTTGGTGTCCTCAACT +
Preference number: 4 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILATAPC*ALVSST
Trigger: AGTTGAGGACACCAAGGCTCAGCAGGGTGCAGTTGC...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCCCTTTGCTGTGGGCGTaGAAATCTGGCACCCGGGCC +
Preference number: 4 (lower is better)
Translates to: GSSLQLNERGCATQELCSPLLWA*KSGTRA
Trigger: GGCCCGGGTGCCAGATTTTCACGCCCACAGCAAAGG...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGGGACCCAGCTACTCATaGGGGGCCTGTCAGGAGGAG +
Preference number: 4 (lower is better)
Translates to: VAQGSGALESSKWPLLNLGPSYS*GACQEE
Trigger: CTCCTCCTGACAGGCCCCTCATGAGTAGCTGGGTCC...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCCAGTGGTTGGGCCTCTaGGGCAGAGTAACACCACAC +
Preference number: 4 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSQWLGL*GRVTPH
Trigger: GTGTGGTGTTACTCTGCCTCAGAGGCCCAACCACTG...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGGGCTCTGCGCTCCCATaGCTTGGAGGCAGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: VAQGSGALESSKWPLLNLGSALP*LGGSGW
Trigger: CCAACCACTGCCTCCAAGTCATGGGAGCGCAGAGCC...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCATGGTCTCGATCTCCTaGCCTCGTGATCCACCCGAC +
Preference number: 4 (lower is better)
Translates to: IPRYPHSNFTNTEQLPSAMVSIS*PRDPPD
Trigger: GTCGGGTGGATCACGAGGTCAGGAGATCGAGACCAT...GGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCGCCGGCCTCAGGCTCTaGAATGGATTCCCGGGCCTC +
Preference number: 4 (lower is better)
Translates to: TLLAISPDTPTAISPTQSAGLRL*NGFPGL
Trigger: GAGGCCCGGGAATCCATTTCAGAGCCTGAGGCCGGC...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp ATCCCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTGGTCACAAGCTCTGGTaGCCCAAAATGGCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: IPQHGTSGPPLPAPTQPVGHKLW*PKMALV
Trigger: GACCAGAGCCATTTTGGGGCACCAGAGCTTGTGACC...AACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR GCA 90 bp ATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCTGCACCGGCATCCTCTaGAATCGACGGCTACTCAGC +
Preference number: 4 (lower is better)
Translates to: IPRYPHSNFTNTEQLPSACTGIL*NRRLLS
Trigger: GCTGAGTAGCCGTCGATTGCAGAGGATGCCGGTGCA...GGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCGGGGTCTTCATAGCTaGGGATCTCAGGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPRGLHS*GSQGPA
Trigger: AGCTGGCCCCTGAGATCCGCAGCTATGAAGACCCCG...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCCTGACAAGCTCCGGGTaGCTTGGGTCCACTTCTAAG +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSLTSSG*LGSTSK
Trigger: CTTAGAAGTGGACCCAAGGCACCCGGAGCTTGTCAG...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCCAGACCTCCGGATATaGAGGAACCGGGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHPDLRI*RNRGLP
Trigger: TGGGAGGCCCCGGTTCCTGCATATCCGGAGGTCTGG...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp ATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCCAGATGAGCTTCCTGTaGTCGAGCCAGGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: IPRYPHSNFTNTEQLPSAQMSFL*SSQAWP
Trigger: TGGCCAAGCCTGGCTCGAGCACAGGAAGCTCATCTG...GGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CCCTGGAAGTCCCACTCTCCAAGGATGTACTGCACCGGCATCCTCTGCAATCGACAGATGAGCTTCCTGTaGTCGAGCCAGGCTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PWKSHSPRMYCTGILCNRQMSFL*SSQAWP
Trigger: TGGCCAAGCCTGGCTCGAGCACAGGAAGCTCATCTG...TCGATTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp TCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCTGAGCCCCGCGACCCAGGAACTGTaGAGCAAAGACCTCCAGACC +
Preference number: 4 (lower is better)
Translates to: SVSGRGINTGGTILRLSPATQEL*SKDLQT
Trigger: GGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGC...GGGGCTCAGCCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCCCATCAGACCATACTaGCAGGCCCTGGGAAGTGCC +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPPIRPY*QALGSA
Trigger: GGCACTTCCCAGGGCCTGGCAGTATGGTCTGATGGG...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTGCCTTGCCCTGGTTGTaGACCCCCTTCGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTALPWL*TPFALP
Trigger: GGGGAGGGCGAAGGGGGTGCACAACCAGGGCAAGGC...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ATGGGTCAGAGAGATAGCAGCTTCCCGCTTATCCACAGCAATGACTCGGCTCTGGGAAGTGGGGAGCCTTaGCCTGGTTGTGCACCCCCT +
Preference number: 4 (lower is better)
Translates to: MGQRDSSFPLIHSNDSALGSGEP*PGCAPP
Trigger: AGGGGGTGCACAACCAGGGCAAGGCTCCCCACTTCC...CAGAGCCGAGTCATTGCTGTGGATAAGCGGGAAGCTGCTATCTCTCTGACCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp CCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTGAATCAAGCCAGTGGCTaGAGGCTTGAGGCCCCGCCT +
Preference number: 4 (lower is better)
Translates to: PPQQFHQHRATALSHSDVNQASG*RLEAPP
Trigger: AGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATT...CACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGGAAGGCAAGGAAAAATaGCACAATGTGCCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGEGKEK*HNVPSQ
Trigger: CTGGCTTGGCACATTGTGGCATTTTTCCTTGCCTTC...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCAGCTAGAGCCACTGGCTaGCCTGGCCTGGGCCTCAAG +
Preference number: 4 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPARATG*PGLGLK
Trigger: CTTGAGGCCCAGGCCAGGGCAGCCAGTGGCTCTAGC...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTGGGCATCGAGAGTACTaGACAAAGGCTGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: AWDLWATSSSTHSTSSSVGHREY*TKAEAQ
Trigger: CTGGGCTTCAGCCTTTGTGCAGTACTCTCGATGCCC...AACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCCCCTTCTGGGACCCATaGTGGTCAGTCTTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: GSGHISQDLRGLHSLDSIPFWDP*WSVFQS
Trigger: AGACTGAAAGACTGACCAGCATGGGTCCCAGAAGGG...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCAAGCGGGGGAAATCCTaGTCTCCTCCCACAGCTACC +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPKRGKS*SPPTAT
Trigger: GGTAGCTGTGGGAGGAGAGCAGGATTTCCCCCGCTT...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGAAGAGACCTGGCTCGTaGCCCAGCCCTGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMKRPGS*PSPAPV
Trigger: GACAGGAGCAGGGCTGGGGCACGAGCCAGGTCTCTT...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTTTCTGCGCTAAGCTCTaGAGGGGACAGCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPFCAKL*RGQPRT
Trigger: GGTCCTGGGCTGTCCCCTGCAGAGCTTAGCGCAGAA...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTAGCCCAGGTAACTTCTaGGCTAAGCTCTGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSSPGNF*AKLCRG
Trigger: TCCCCTGCAGAGCTTAGCGCAGAAGTTACCTGGGCT...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGAGCCCAGGTAACTTCTaGGCTAAGCTCTGCAGGGGA +
Preference number: 4 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWSPGNF*AKLCRG
Trigger: TCCCCTGCAGAGCTTAGCGCAGAAGTTACCTGGGCT...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTGCACCCAGGAGCAGCTaGAGGTCTTCTAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATAPRSS*RSSRKP
Trigger: GGGCTTTCTAGAAGACCTGCAGCTGCTCCTGGGTGC...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCGGCAGCCACTTTCGCTaGCCTCTCCTGCCCCACACC +
Preference number: 4 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPGSHFR*PLLPHT
Trigger: GGTGTGGGGCAGGAGAGGGCAGCGAAAGTGGCTGCC...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGGCTCACGGGACCCGGTaGTCAAGGCCCACGCCCATG +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMAHGTR*SRPTPM
Trigger: CATGGGCGTGGGCCTTGAGCACCGGGTCCCGTGAGC...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCGCTCACGGGACCCGGTaGTCAAGGCCCACGCCCATG +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTAHGTR*SRPTPM
Trigger: CATGGGCGTGGGCCTTGAGCACCGGGTCCCGTGAGC...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTACCCAGTTGGCCAGGTaGAGTGGCTCACGGGACCCG +
Preference number: 4 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWATQLAR*SGSRDP
Trigger: CGGGTCCCGTGAGCCACTGCACCTGGCCAACTGGGT...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCACCCAGTTGGCCAGGTaGAGTGGCTCACGGGACCCG +
Preference number: 4 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPTQLAR*SGSRDP
Trigger: CGGGTCCCGTGAGCCACTGCACCTGGCCAACTGGGT...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTACACACACACACACGTaGATGCATGCAACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSTHTHT*MHATLA
Trigger: AGCCAGGGTTGCATGCATGCACGTGTGTGTGTGTGT...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCTTTCCCTCCCAGACCTaGCTCACCTTGCTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSFPSQT*LTLLCD
Trigger: GTCACACAGCAAGGTGAGGCAGGTCTGGGAGGGAAA...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCCTGGAAGTCCCACTCTCCAAGGATGTACTGCACCGGCATCCTCTGCAATCGACCAGCCAGAGGTGGTTaGGGTTGCCATGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: PWKSHSPRMYCTGILCNRPARGG*GCHELK
Trigger: CTTCAGCTCATGGCAACCCCAACCACCTCTGGCTGG...TCGATTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR CCA 90 bp ACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCACAGCATGGGACCTCTaGGCCACCTCTTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: THSTSSSVSGRGINTGGTTAWDL*ATSSST
Trigger: GGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGT...GGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR CCA 90 bp TCCTCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCTGAGCAATGAGGGGGCTGCCTaGGGATCCCACAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: SSVSGRGINTGGTILRLSNEGAA*GSHSMG
Trigger: TCCCATGCTGTGGGATCCCCAGGCAGCCCCCTCATT...GCTCAGCCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGAGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR CCA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTGCAATGACTCGGCTCTaGGGGAGCTGGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPAMTRL*GSWLSR
Trigger: CCTGCTGAGCCAGCTCCCCCAGAGCCGAGTCATTGC...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCTGCACAGACCAGAGCTaGGGTGGAGGCCACAACCCT +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCCTDQS*GGGHNP
Trigger: AGGGTTGTGGCCTCCACCCCAGCTCTGGTCTGTGCA...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GAGCCCCTGGAAGTCCCACTCTCCAAGGATGTACTGCACCGGCATCCTCTGCAAAAAGAGGTTGCCAGTTaGCGTTGGCCCTGGACTCAG +
Preference number: 4 (lower is better)
Translates to: EPLEVPLSKDVLHRHPLQKEVAS*RWPWTQ
Trigger: CTGAGTCCAGGGCCAACGCCAACTGGCAACCTCTTT...TTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAGGGGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCCAGAGTCCATGCAGCTaGGGCTGGGCACAGGGCAGG +
Preference number: 4 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGQSPCS*GWAQGR
Trigger: CCTGCCCTGTGCCCAGCCCCAGCTGCATGGACTCTG...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTTGGGGAGCCTTGCCCTaGTTGTGCACCCCCTTCGCC +
Preference number: 4 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCWGALP*LCTPFA
Trigger: GGCGAAGGGGGTGCACAACCAGGGCAAGGCTCCCCA...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTGGGGGACTAAGGAAGTaGGGAGCCTTGCCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPGGLRK*GALPWL
Trigger: CAACCAGGGCAAGGCTCCCCACTTCCTTAGTCCCCC...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCGCCAGGCACATCCCATaGGCTCCTCACATGCATCCT +
Preference number: 4 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSARHIP*APHMHP
Trigger: AGGATGCATGTGAGGAGCCCATGGGATGTGCCTGGC...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCTATGCTCTGGGCTCTaGCTGAAGGAGGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPLCSGL*LKEAAR
Trigger: CCGTGCAGCCTCCTTCAGCCAGAGCCCAGAGCATAG...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CTGGGGATCCCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAAAGGTTTCTGAAGGCATaGTACAGAAGGTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LGIPQHGTSGPPLPAPTQRFLKA*YRRCQQ
Trigger: CTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCT...TTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGGGATCCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCCTGCCAGGTCAGATGTaGGCCACATGGGAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSLPGQM*ATWEVP
Trigger: TGGGACTTCCCATGTGGCCCACATCTGACCTGGCAG...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CTGGAAGTCCCACTCTCCAAGGATGTACTGCACCGGCATCCTCTGCAATCGACGCTGCCAGGTCAGATGTaGGCCACATGGGAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: LEVPLSKDVLHRHPLQSTLPGQM*ATWEVP
Trigger: TGGGACTTCCCATGTGGCCCACATCTGACCTGGCAG...CGTCGATTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCCCTGTTCTCCTGGTGTaGCTGTTGCGCAGGGATCAG +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPPVLLV*LLRRDQ
Trigger: CTGATCCCTGCGCAACAGCCACACCAGGAGAACAGG...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTTCACCCACTCCCTTCTaGGACCCATGCTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATSPTPF*DPCWSV
Trigger: GACTGACCAGCATGGGTCCCAGAAGGGAGTGGGTGA...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCTCTGGACCCAGTCTCTaGAGATGGGCCATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCSGPSL*RWAMEA
Trigger: GGCCTCCATGGCCCATCTCCAGAGACTGGGTCCAGA...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCATAGCTGGGGCAGGTaGAGGTCAGCCCAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPHSWGR*RSAQFR
Trigger: CCTGAACTGGGCTGACCTCCACCTGCCCCAGCTATG...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGTCAGGTCTAGGAGAGTaGTCTTCACAACTCTACCTC +
Preference number: 4 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGSGLGE*SSQLYL
Trigger: GAGGTAGAGTTGTGAAGACCACTCTCCTAGACCTGA...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGTTAGACACATCCATCTaGTGCCTCATCCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGLDTSI*CLIPEP
Trigger: AGGTTCTGGGATGAGGCACCAGATGGATGTGTCTAA...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTGAGCCTCCCGAGTAGGTaGGACCACAGGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: PPQQFHQHRATALSHSDVSLPSR*DHRHVP
Trigger: TGGCACATGCCTGTGGTCCCACCTACTCGGGAGGCT...CACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTAGCCTCCCGAGTAGGTaGGACCACAGGCATGTGCCA +
Preference number: 4 (lower is better)
Translates to: PIPPQQFHQHRATALSHSSLPSR*DHRHVP
Trigger: TGGCACATGCCTGTGGTCCCACCTACTCGGGAGGCT...AGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCGGGGGCTGGAGCAGTTaGGGCAGACCTCCGGGAAGG +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTGGWSS*GRPPGR
Trigger: CCTTCCCGGAGGTCTGCCCCAACTGCTCCAGCCCCC...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCAAGGGAGGCCCTGCGTaGACACCTATGATTATGGAC +
Preference number: 4 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLKGGPA*TPMIMD
Trigger: GTCCATAATCATAGGTGTCCACGCAGGGCCTCCCTT...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGGAGGTCAACGGAGTGTaGTTCTCAGGGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGREVNGV*FSGGAK
Trigger: CTTGGCACCCCCTGAGAACCACACTCCGTTGACCTC...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTGGGCTGGCCTGGGTGTaGCCCCAGCTACGAAGATCC +
Preference number: 4 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWAGLAWV*PQLRRS
Trigger: GGATCTTCGTAGCTGGGGCCACACCCAGGCCAGCCC...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATCAGAGTCTGAAGGGCTaGGCTGGCCTGGGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDQSLKG*AGLGVA
Trigger: GGCCACACCCAGGCCAGCCCAGCCCTTCAGACTCTG...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGCCACCCCACTGTGACTaGCAGAGTCTGAAGGGCTGG +
Preference number: 4 (lower is better)
Translates to: RSHPREGQILGLKSRLVWPPHCD*QSLKGW
Trigger: CCAGCCCTTCAGACTCTGCCAGTCACAGTGGGGTGG...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTAGCCTCCTCTGCCCTTaGAGGGCGCACAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPSLLCP*RAHRTL
Trigger: CAAGGTCCTGTGCGCCCTCCAAGGGCAGAGGAGGCT...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCCCTCTACAATTTGTCTaGCCCCCACCCCTCACCCTG +
Preference number: 4 (lower is better)
Translates to: SVHATHIRSTSESGFSGSPLQFV*PPPLTL
Trigger: CAGGGTGAGGGGTGGGGGCCAGACAAATTGTAGAGG...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCGGCTGTCCCAGAGTGTaGAGTGGCTGTGTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGGCPRV*SGCVLS
Trigger: GGAAAGAACACAGCCACTCCACACTCTGGGACAGCC...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCGGGATGGACGCAAGCTaGCTGTCCCAGAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCGMDAS*LSQSVE
Trigger: CTCCACACTCTGGGACAGCCAGCTTGCGTCCATCCC...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCACTCTCTGTCTTCCTTaGTTTCAGGCTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: GSGHISQDLRGLHSLDSITLCLP*FQAAPG
Trigger: CCCTGGAGCAGCCTGAAACCAAGGAAGACAGAGAGT...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCTGAGCCCCCCTCAGGCTCTGAAATaGATTCCCGGGCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: SVSGRGINTGGTILRLSPPQALK*IPGPQG
Trigger: TCCCTGAGGCCCGGGAATCCATTTCAGAGCCTGAGG...GGGGCTCAGCCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGA
58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
3UTR CAA 72 bp CAAAACGCAGATGAGCTTCCTGTGCTCGAGCCAGGCTaGGCCAGGGAATTGTGTACGCATGCACCCAGGGCA +
Preference number: 4 (lower is better)
Translates to: QNADELPVLEPG*ARELCTHAPRA
Trigger: TGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGCCTGGCTCGAGCACAGGAAGCTCATCTGCGTTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 72 bp TGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTaGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGT +
Preference number: 4 (lower is better)
Translates to: CRQGQPVLLVWL*RRDQVHLSLRS
Trigger: ACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 72 bp AGTGGAAGGGAAGAGCTCTGCAAACTGGCAGAGAACTaGGTCTGGGGCCATGTAGTGGAGGGGCAACACCCC +
Preference number: 4 (lower is better)
Translates to: SGREELCKLAEN*VWGHVVEGQHP
Trigger: GGGGTGTTGCCCCTCCACTACATGGCCCCAGACCAAGTTCTCTGCCAGTTTGCAGAGCTCTTCCCTTCCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTGCCGGCCTCAGGCTCTaGAATGTTTTGGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPAGLRL*NVLAPR
Trigger: CCTTGGAGCCAAAACATTTCAGAGCCTGAGGCCGGC...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000455834.5
CDS-3UTR TCA 90 bp TGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGAGGGAGATGGCTCCTaGTCCGCAGCCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: WGNHRTLGNAIRTWALESEGDGS*SAAHLQ
Trigger: CTGGAGGTGGGCTGCGGATCAGGAGCCATCTCCCTC...ACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAAGCTTATCCACAGCAATaGCTCGGCTCTGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQAYPQQ*LGSGGA
Trigger: AGCTCCCCCAGAGCCGAGTCATTGCTGTGGATAAGC...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTGCTTATCCACAGCAATaGCTCGGCTCTGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPAYPQQ*LGSGGA
Trigger: AGCTCCCCCAGAGCCGAGTCATTGCTGTGGATAAGC...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGTGCAACCGAAGCCTCTaGGCATTCTCATGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWCNRSL*AFSWVR
Trigger: TCTGACCCATGAGAATGCTCAGAGGCTTCGGTTGCA...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCGTAGGGAGGGTTGCTaGCAATCAGGTCCATGGGGC +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLRREGC*QSGPWG
Trigger: GCCCCATGGACCTGATTGTCAGCAACCCTCCCTACG...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTTCAGGCTGGCGGCACTaGCAAGGCATCCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCSGWRH*QGIHRA
Trigger: TGCCCTGTGGATGCCTTGTCAGTGCCGCCAGCCTGA...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCATCAGGCTGGCGGCACTaGCAAGGCATCCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPSGWRH*QGIHRA
Trigger: TGCCCTGTGGATGCCTTGTCAGTGCCGCCAGCCTGA...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCGAGCCAAAACGCAGATaGGCTTCCTGTGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPEPKRR*ASCARA
Trigger: GGCTCGAGCACAGGAAGCTCATCTGCGTTTTGGCTC...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTGGAGCCAAAACGCAGATaGGCTTCCTGTGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: PPQQFHQHRATALSHSDVEPKRR*ASCARA
Trigger: GGCTCGAGCACAGGAAGCTCATCTGCGTTTTGGCTC...CACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGCCTCCTGGTGGCCATaGGTCTGCACAGACCAGAGC +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDASWWP*VCTDQS
Trigger: GCTCTGGTCTGTGCAGACTCATGGCCACCAGGAGGC...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCGGCAGTCTAGTGGAATaGGACAGCCTGGTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSGSLVE*DSLVCH
Trigger: ATGGCAAACCAGGCTGTCTCATTCCACTAGACTGCC...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGGGCAGTCTAGTGGAATaGGACAGCCTGGTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWGSLVE*DSLVCH
Trigger: ATGGCAAACCAGGCTGTCTCATTCCACTAGACTGCC...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCACCCTGAGATGCTGCTaGAGACAGCAAGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSTLRCC*RQQEPK
Trigger: CTTTGGCTCTTGCTGTCTTCAGCAGCATCTCAGGGT...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACAGCTCTGGGCTCTGGCTaGAGGAGGCTGCACGGGCAG +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTALGSG*RRLHGQ
Trigger: CTGCCCGTGCAGCCTCCTTCAGCCAGAGCCCAGAGC...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCCATGGAGAAACCCACTaGCAACTGGGAAAAGCATCC +
Preference number: 4 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLHGETH*QLGKAS
Trigger: GGATGCTTTTCCCAGTTGTCAGTGGGTTTCTCCATG...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCGATTTGGGGCCAAGCTaGCCCTTGAACCCAGGTGTC +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPDLGPS*PLNPGV
Trigger: GACACCTGGGTTCAAGGGTCAGCTTGGCCCCAAATC...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGAAAATTAGCCTTTCCTaGCCATTTTCCTGCAGGACT +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLKISLS*PFSCRT
Trigger: AGTCCTGCAGGAAAATGGTCAGGAAAGGCTAATTTT...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGAGCAACTGCACCCTGCTaGGCCTTGGTGTCCTCAACT +
Preference number: 4 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGATAPC*ALVSST
Trigger: AGTTGAGGACACCAAGGCTCAGCAGGGTGCAGTTGC...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGACACAAAGTAGGTCTTaGGAGACTGAGGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRTQSRS*ETEALA
Trigger: GGCCAGGGCCTCAGTCTCTCAAGACCTACTTTGTGT...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCTGCTGTGTCCTCGCCTaGCCTTGTATTCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPCCVLA*PCILPH
Trigger: GTGGGGCAGAATACAAGGTCAGGCGAGGACACAGCA...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGGGCCAGGGCCCCACCTaGACCATCCAACCTCCTGGG +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQGQGPT*TIQPPG
Trigger: CCCAGGAGGTTGGATGGTTCAGGTGGGGCCCTGGCC...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCCTATGTGCAAGTCCATaGGTTCTGCAAGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSLCASP*VLQGQG
Trigger: GCCCTGGCCTTGCAGAACTCATGGACTTGCACATAG...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCCAAGGCCCACGCCCATaGACATACACGTACGTGTGG +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALQGPRP*TYTYVW
Trigger: CCACACGTACGTGTATGTTCATGGGCGTGGGCCTTG...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCAGTGGTTGGGCCTCTaGGGCAGAGTAACACCACAC +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPQWLGL*GRVTPH
Trigger: GTGTGGTGTTACTCTGCCTCAGAGGCCCAACCACTG...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACACTTCTCCGGGGCCCCTaGGTCAGGTGCACAGTCAGG +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTLLRGP*VRCTVR
Trigger: CCTGACTGTGCACCTGACTCAGGGGCCCCGGAGAAG...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGGTCCCACCCAAGGGGTaGGGGAGCTGGGCATGTGTC +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMVPPKG*GSWACV
Trigger: GACACATGCCCAGCTCCCTCACCCCTTGGGTGGGAC...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCATCTCAGGGGCCAGCTaGTCCATGTCCTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: THSTSSSVSGRGINTGGTISGAS*SMSWWK
Trigger: CTTCCACCAGGACATGGAGCAGCTGGCCCCTGAGAT...GGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCGGGGTCTTCATAGCTaGGGATCTCAGGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPRGLHS*GSQGPA
Trigger: AGCTGGCCCCTGAGATCCGCAGCTATGAAGACCCCG...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp ATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCCTGACAAGCTCCGGGTaGCTTGGGTCCACTTCTAAG +
Preference number: 4 (lower is better)
Translates to: IPRYPHSNFTNTEQLPSALTSSG*LGSTSK
Trigger: CTTAGAAGTGGACCCAAGGCACCCGGAGCTTGTCAG...GGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCCCAGACCTCCGGATATaGAGGAACCGGGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGPDLRI*RNRGLP
Trigger: TGGGAGGCCCCGGTTCCTGCATATCCGGAGGTCTGG...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCCCAGACCTCCGGATATaGAGGAACCGGGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGPDLRI*RNRGLP
Trigger: TGGGAGGCCCCGGTTCCTGCATATCCGGAGGTCTGG...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTTCCACAGGGCAGCCATaGTATGGCCCAGACCTCCGG +
Preference number: 4 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCSTGQP*YGPDLR
Trigger: CCGGAGGTCTGGGCCATAGCATGGCTGCCCTGTGGA...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGCTCAGCTCTCCCAGCTaGAGCAGAGGATGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: RSHPREGQILGLKSRLVWLSSPS*SRGCCL
Trigger: TAGGCAGCATCCTCTGCTGCAGCTGGGAGAGCTGAG...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTAGCCTTGCCCTGGTTGTaGACCCCCTTCGCCCTCCCC +
Preference number: 4 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLALPWL*TPFALP
Trigger: GGGGAGGGCGAAGGGGGTGCACAACCAGGGCAAGGC...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCGGAAGTGGGGAGCCTTaGCCTGGTTGTGCACCCCCT +
Preference number: 4 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFGSGEP*PGCAPP
Trigger: AGGGGGTGCACAACCAGGGCAAGGCTCCCCACTTCC...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCCTGGGCAGAAAGTTGTaGCCGAGGCCGGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGLGRKL*PRPAPA
Trigger: AGCAGGAGCCGGCCTCGGGCACAACTTTCTGCCCAG...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCACTGCCTTGTATCCCTaGCTGCCTTATGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGTALYP*LPYVGP
Trigger: GGGACCAACATAAGGCAGGCAGGGATACAAGGCAGT...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp TCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCTGAGCCCCTGGAAGACTGCCTTGTATCCCTaGCTGCCTTATGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: SGRGINTGGTILRLSPWKTALYP*LPYVGP
Trigger: GGGACCAACATAAGGCAGGCAGGGATACAAGGCAGT...CTTCCAGGGGCTCAGCCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACAGGGGAGATGTAGGCTaGCAGGCTACCAGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHRGDVG*QATSLL
Trigger: CAGCAGGCTGGTAGCCTGGCAGCCTACATCTCCCCT...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGAAGACCTCAGGGGCTTaGACAGCCTGGACTCCATCA +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRKTSGA*TAWTPS
Trigger: TGATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTT...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATCTGGCTGAAGGAGGCTaGACGGGCAGTGGGCACATC +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDLAEGG*TGSGHI
Trigger: GATGTGCCCACTGCCCGTGCAGCCTCCTTCAGCCAG...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCAAGAAGTGGATTGTTTaGACCGCCTGGGCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLKKWIV*TAWAKG
Trigger: TCCCTTTGCCCAGGCGGTGCAAACAATCCACTTCTT...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCCCGGAATACATGGGCTaGCAGGTCAGATGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCPEYMG*QVRCGP
Trigger: TGGCCCACATCTGACCTGGCAGCCCATGTATTCCGG...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CTGCTCCATGTCCTGGTGGAAGACGTAGGGAGGGTTGCTGACAATCAGGTCCATCCGGAATACATGGGCTaGCAGGTCAGATGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLHVLVEDVGRVADNQVHPEYMG*QVRCGP
Trigger: TGGCCCACATCTGACCTGGCAGCCCATGTATTCCGG...ATGGACCTGATTGTCAGCAACCCTCCCTACGTCTTCCACCAGGACATGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCCTCAACTTGAATGGCTaGCTGGGTCGGGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALLNLNG*LGRAEG
Trigger: GCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAG...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAGGCGCCTGCTCCTACTaGCGCCAAGGACAGCCTGTT +
Preference number: 4 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRAGACSY*RQGQPV
Trigger: AACAGGCTGTCCTTGGCGGCAGTAGGAGCAGGCGCC...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTGAACCCAGGTGTCCATaGTCTCTGTCCCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPEPRCP*SLSPSF
Trigger: GAAGCTGGGGGACAGAGAGCATGGACACCTGGGTTC...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCAAGCGGGGGAAATCCTaGTCTCCTCCCACAGCTACC +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPKRGKS*SPPTAT
Trigger: GGTAGCTGTGGGAGGAGAGCAGGATTTCCCCCGCTT...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACACCACTTAGCCAGGCCTaGCTGCCACGGGGCATGGCT +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTPLSQA*LPRGMA
Trigger: AGCCATGCCCCGTGGCAGGCAGGCCTGGCTAAGTGG...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTTTCTGCGCTAAGCTCTaGAGGGGACAGCCCAGGACC +
Preference number: 4 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPFCAKL*RGQPRT
Trigger: GGTCCTGGGCTGTCCCCTGCAGAGCTTAGCGCAGAA...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAAGTTGCAGCCTCCTaGCCCAGCCCCTTTTTCCTG +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPQVAAS*PSPFFL
Trigger: CAGGAAAAAGGGGCTGGGGCAGGAGGCTGCAACTTG...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCTCCAGCATGGCCAGCTaGTGGCTGTGTGACCTTGGG +
Preference number: 4 (lower is better)
Translates to: GSSLQLNERGCATQELCSSSMAS*WLCDLG
Trigger: CCCAAGGTCACACAGCCAGCAGCTGGCCATGCTGGA...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGAGGCATGTGCCACCATaGCCAGCTCATATTTTTAAT +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLRHVPP*PAHIFN
Trigger: ATTAAAAATATGAGCTGGGCATGGTGGCACATGCCT...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCTTCAAGCAATTCTCCTaGTTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLFKQFS*FSLPSS
Trigger: GCTACTCGGGAGGCTGAAGCAGGAGAATTGCTTGAA...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAACAAGTCCATGAGTTCTaGAAGGCCAGGGCCCCACCT +
Preference number: 4 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQQVHEF*KARAPP
Trigger: AGGTGGGGCCCTGGCCTTGCAGAACTCATGGACTTG...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCAGCTTACATGGGCTCTaGGCTCCCATGACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPSLHGL*APMTWR
Trigger: CCTCCAAGTCATGGGAGCGCAGAGCCCATGTAAGCT...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCCAGCAGCCTCCTCTaGCCTTGGAGGGCGCACAGG +
Preference number: 4 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRASSLL*PWRAHR
Trigger: CCTGTGCGCCCTCCAAGGGCAGAGGAGGCTGCTGGC...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGCCACGGGGCCAGCTTTaGCTCGGGCACAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMPRGQL*LGHSAP
Trigger: TGGAGCACTGTGCCCGAGGCAAAGCTGGCCCCGTGG...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTAGTGCCCATTCCTTGTaGCTGGCACAGTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPSAHSL*LAQCQQ
Trigger: CTGCTGGCACTGTGCCAGGCACAAGGAATGGGCACT...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTCCAAGATCACGCCACTaGACTCCAGCCTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: PIPPQQFHQHRATALSHSPRSRH*TPAWQQ
Trigger: CTGTTGCCAGGCTGGAGTGCAGTGGCGTGATCTTGG...AGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGTTTGCGTGGCTCCCCTaGGTTGTTTGCAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRFAWLP*VVCRRG
Trigger: ACCTCTCCTGCAAACAACGCAGGGGAGCCACGCAAA...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TCCTCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCTGAGCAGGTCTCCAGGCGGTTaGAGTCGAAACACCCCGTTC +
Preference number: 4 (lower is better)
Translates to: SSVSGRGINTGGTILRLSRSPGG*SRNTPF
Trigger: GAACGGGGTGTTTCGACTGCAACCGCCTGGAGACCT...GCTCAGCCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000424388.1
CDS-3UTR GCA 90 bp CCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCCCTGTTTCCCCATCTaGACTATGGAGAATGGTACC +
Preference number: 4 (lower is better)
Translates to: PQHGTSGPPLPAPTQPVPPCFPI*TMENGT
Trigger: GGTACCATTCTCCATAGTGCAGATGGGGAAACAGGG...AGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424388.1
CDS-3UTR CCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCTGGACCCAGCTGGGTaGAGATGGAGAGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPLDPAG*RWRGHK
Trigger: CTTGTGACCTCTCCATCTCCACCCAGCTGGGTCCAG...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp ACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTCCAGTTCTATGGCACTaGATAACCCAGCCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: TAWDLWATSSSTHSTSSSPVLWH*ITQPEV
Trigger: CACCTCTGGCTGGGTTATCCAGTGCCATAGAACTGG...AGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR CCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCAAGACCCCAGTCCAGTaGCTGACCAGTTCTATGGCA +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSKTPVQ*LTSSMA
Trigger: TGCCATAGAACTGGTCAGCCACTGGACTGGGGTCTT...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCCACGATGTACTCACTaGATTCCCGGGCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPPRCTH*IPGPQG
Trigger: TCCCTGAGGCCCGGGAATCCAGTGAGTACATCGTGG...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000455834.5
CDS-3UTR CCA 90 bp TCCTCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCTGAGCCTTAGGCTGAGCCCCTaGAAGTCCCACTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: SSVSGRGINTGGTILRLSLRLSP*KSHSPR
Trigger: CCTTGGAGAGTGGGACTTCCAGGGGCTCAGCCTAAG...GCTCAGCCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGAGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR CCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGAATGAGGGGGCTGCCTaGGGATCCCACAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMNEGAA*GSHSMG
Trigger: TCCCATGCTGTGGGATCCCCAGGCAGCCCCCTCATT...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAAAGGGCAGCCATGCTATaGCCCAGACCTCCGGATATG +
Preference number: 4 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQRAAML*PRPPDM
Trigger: CATATCCGGAGGTCTGGGCCATAGCATGGCTGCCCT...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCAGGGCAGCCATGCTATaGCCCAGACCTCCGGATATG +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPRAAML*PRPPDM
Trigger: CATATCCGGAGGTCTGGGCCATAGCATGGCTGCCCT...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp CTGGGGATCCCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAAAATGCCATAAGAACCTaGGCTCTGGAAAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: LGIPQHGTSGPPLPAPTQNAIRT*ALESAI
Trigger: GATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATT...TTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGGGATCCCCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp GAGCCCCTGGAAGTCCCACTCTCCAAGGATGTACTGCACCGGCATCCTCTGCAAATGCACCCAGGGCAGTaGAGGACTAATCAATCCCTG +
Preference number: 4 (lower is better)
Translates to: EPLEVPLSKDVLHRHPLQMHPGQ*RTNQSL
Trigger: CAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCAT...TTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAGGGGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp ACCAGTTCCTCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGAGGACACTGGGGCACTaGGAGCTGCAGTGTGACCTC +
Preference number: 4 (lower is better)
Translates to: TSSSVSGRGINTGGTILRRTLGH*ELQCDL
Trigger: GAGGTCACACTGCAGCTCCCAGTGCCCCAGTGTCCT...CCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGAGGAACTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCCCAGTCCTCTTGGCTTaGACCTTTTCCTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGPVLLA*TFSSAE
Trigger: CTCTGCTGAGGAAAAGGTCCAAGCCAAGAGGACTGG...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTCCAGTCCTCTTGGCTTaGACCTTTTCCTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSPVLLA*TFSSAE
Trigger: CTCTGCTGAGGAAAAGGTCCAAGCCAAGAGGACTGG...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTGCCAGGCACATCCCATaGGCTCCTCACATGCATCCT +
Preference number: 4 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPARHIP*APHMHP
Trigger: AGGATGCATGTGAGGAGCCCATGGGATGTGCCTGGC...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACTGGGCCTCAAGGCACTaGGGCCATAGTGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHWASRH*GHSEER
Trigger: CCTCTCCTCACTATGGCCCCAGTGCCTTGAGGCCCA...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCGACATATGCTGGTGGTaGTGGGGAGGCTGTTCGAGT +
Preference number: 4 (lower is better)
Translates to: SVHATHIRSTSESGFSGSDICWW*WGGCSS
Trigger: ACTCGAACAGCCTCCCCACCACCACCAGCATATGTC...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAAAGGCTGCACGGGCAGTaGGCACATCTCTCAAGACCT +
Preference number: 4 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQRLHGQ*AHLSRP
Trigger: AGGTCTTGAGAGATGTGCCCACTGCCCGTGCAGCCT...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCTCCTGTCTATGCTCTaGGCTCTGGCTGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPLLSML*ALAEGG
Trigger: GCCTCCTTCAGCCAGAGCCCAGAGCATAGACAGGAG...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCAGGTTTCTGAAGGCATaGTACAGAAGGTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: GSGHISQDLRGLHSLDSIRFLKA*YRRCQQ
Trigger: CTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCT...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCTGCCAGGTCAGATGTaGGCCACATGGGAAGTCCCA +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPLPGQM*ATWEVP
Trigger: TGGGACTTCCCATGTGGCCCACATCTGACCTGGCAG...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGCTTGAGTCTTCGAAGTaGCCATTGCTCAACTTGAAT +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLLESSK*PLLNLN
Trigger: ATTCAAGTTGAGCAATGGCCACTTCGAAGACTCAAG...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACGACAGCCTGTTCTCCTaGTGTGGCTGTTGCGCAGGG +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHDSLFS*CGCCAG
Trigger: CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTC...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCGAGCTCCAGGAAACCTaGCGCCTGCTCCTACTGCCG +
Preference number: 4 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFELQET*RLLLLP
Trigger: CGGCAGTAGGAGCAGGCGCCAGGTTTCCTGGAGCTC...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCGAGCTCCAGGAAACCTaGCGCCTGCTCCTACTGCCG +
Preference number: 4 (lower is better)
Translates to: GNHRTLGNAIRTWALESAELQET*RLLLLP
Trigger: CGGCAGTAGGAGCAGGCGCCAGGTTTCCTGGAGCTC...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCTCTGGAGATGGGCCATaGAGGCCAGCCTTGCACTTT +
Preference number: 4 (lower is better)
Translates to: SVHATHIRSTSESGFSGSSGDGP*RPALHF
Trigger: AAAGTGCAAGGCTGGCCTCCATGGCCCATCTCCAGA...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGTCTGGAGATGGGCCATaGAGGCCAGCCTTGCACTTT +
Preference number: 4 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILSGDGP*RPALHF
Trigger: AAAGTGCAAGGCTGGCCTCCATGGCCCATCTCCAGA...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAAGAGCAGGAACAGGCTTaGTCCCAGTCTCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQEQEQA*SQSLRS
Trigger: GGACCTCAGAGACTGGGACCAAGCCTGTTCCTGCTC...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCCTTGGCTGGGTGGGATaGTGTCTCCAGAGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSLGWVG*CLQSPL
Trigger: TAAAGGACTCTGGAGACACCATCCCACCCAGCCAAG...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGGAAAGCCAGGTGGGGTaGGGGGTCTTCAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: VAQGSGALESSKWPLLNLESQVG*GVFRWQ
Trigger: TTGCCACCTGAAGACCCCCCACCCCACCTGGCTTTC...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCAGGCAGGCCTGTTCCTaGAAAGCCAGGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GNHRTLGNAIRTWALESARQACS*KARWGG
Trigger: CCCACCCCACCTGGCTTTCCAGGAACAGGCCTGCCT...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAGGCAGGCCTGTTCCTaGAAAGCCAGGTGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TLLAISPDTPTAISPTQSRQACS*KARWGG
Trigger: CCCACCCCACCTGGCTTTCCAGGAACAGGCCTGCCT...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAACCAGCCCCTTTTTCCTaGCAGCCAGAAAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQPAPFS*QPERAA
Trigger: GGCTGCTCTTTCTGGCTGCCAGGAAAAAGGGGCTGG...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCCTGGGCTGCATTTaGCCTCGGCAGCCTGCTCAC +
Preference number: 4 (lower is better)
Translates to: WGNHRTLGNAIRTWALESALGCI*PRQPAH
Trigger: GTGAGCAGGCTGCCGAGGCCAAATGCAGCCCAGGGC...ACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGAAGGGAATGGTCACGTaGGGCATCAAGTGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILKGMVT*GIKCPR
Trigger: TCTGGGGCACTTGATGCCCCACGTGACCATTCCCTT...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCGTGACAGATGCTGGGTaGGAGGTGCCGGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: TLLAISPDTPTAISPTQSVTDAG*EVPGAS
Trigger: TGAGGCTCCCGGCACCTCCCACCCAGCATCTGTCAC...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTTGGGGCAACCACACTaGAGCCTGGTGGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPLGQPH*SLVGLP
Trigger: TGGGAGCCCCACCAGGCTCCAGTGTGGTTGCCCCAA...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCCCCCTTCCCCAACTTTaGGAAGGTGGTCTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALPLPQL*EGGLSP
Trigger: AGGGCTGAGACCACCTTCCCAAAGTTGGGGAAGGGG...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCGGACATGGACCCAGTTaGCCAGGTGCAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLGHGPS*PGAVAH
Trigger: GTGAGCCACTGCACCTGGCCAACTGGGTCCATGTCC...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAATTGGTTTCCAGAGCCTaGAGCTCCCCCATCCAAGGG +
Preference number: 4 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQLVSRA*SSPIQG
Trigger: CCCTTGGATGGGGGAGCTCCAGGCTCTGGAAACCAA...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTTGCGCTCCCATGACTTaGAGGCAGTGGTTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPCAPMT*RQWLGL
Trigger: GAGGCCCAACCACTGCCTCCAAGTCATGGGAGCGCA...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCGCTGGGAGGAGCCTGTaGTTAGTTCCCAGGCGGGTT +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLAGRSL*LVPRRV
Trigger: AACCCGCCTGGGAACTAACCACAGGCTCCTCCCAGC...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTATGCTGGAGGGAGGCTaGCAACAGGGGAAAGTTCCA +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATMLEGG*QQGKVP
Trigger: TGGAACTTTCCCCTGTTGCCAGCCTCCCTCCAGCAT...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTCAGAGTCTGAAGGGCTaGGCTGGCCTGGGTGTGGCC +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTQSLKG*AGLGVA
Trigger: GGCCACACCCAGGCCAGCCCAGCCCTTCAGACTCTG...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCTCTTCAGTTGGGAGCTaGCAGAAAACACAAGCCACG +
Preference number: 4 (lower is better)
Translates to: GSGHISQDLRGLHSLDSISSVGS*QKTQAT
Trigger: CGTGGCTTGTGTTTTCTGCCAGCTCCCAACTGAAGA...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGTATCAATCCCAGGTGTaGAAACCTCTTCCTTTGCGT +
Preference number: 4 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGYQSQV*KPLPLR
Trigger: ACGCAAAGGAAGAGGTTTCCACACCTGGGATTGATA...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGGGGATTGCTCCGAGCTaGCGTTTAGGAACCAGGCCG +
Preference number: 4 (lower is better)
Translates to: VAQGSGALESSKWPLLNLGIAPS*RLGTRP
Trigger: CGGCCTGGTTCCTAAACGCCAGCTCGGAGCAATCCC...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434410.5
3UTR CAA 72 bp TCCAGACCCTCCCCTCCAGAAAGCAGGCAGTCATCCTaGAGCCAAAACGCAGATGAGCTTCCTGTGCTCGAG +
Preference number: 4 (lower is better)
Translates to: SRPSPPESRQSS*SQNADELPVLE
Trigger: CTCGAGCACAGGAAGCTCATCTGCGTTTTGGCTCAAGGATGACTGCCTGCTTTCTGGAGGGGAGGGTCTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 72 bp GTGTTTGAGCTTACATGGGCTCTGCGCTCCCATGACTaGGAGGCAGTGGTTGGGCCTCTGAGGCAGAGTAAC +
Preference number: 4 (lower is better)
Translates to: VFELTWALRSHD*EAVVGPLRQSN
Trigger: GTTACTCTGCCTCAGAGGCCCAACCACTGCCTCCAAGTCATGGGAGCGCAGAGCCCATGTAAGCTCAAACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGTGGTTGGGGTTGCCATaGGCTGAAGGCCCAGCCCCG +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQWLGLP*AEGPAP
Trigger: CGGGGCTGGGCCTTCAGCTCATGGCAACCCCAACCA...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCGCCGGCCTCAGGCTCTaGAATGTTTTGGCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: GSSLQLNERGCATQELCSAGLRL*NVLAPR
Trigger: CCTTGGAGCCAAAACATTTCAGAGCCTGAGGCCGGC...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCATACACTGTAGTTGCTaGGAGGTCAAGGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPIHCSC*EVKGWV
Trigger: GACCCAGCCCTTGACCTCTCAGCAACTACAGTGTAT...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp TGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTATACACTGTAGTTGCTaGGAGGTCAAGGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: WDLWATSSSTHSTSSSVSIHCSC*EVKGWV
Trigger: GACCCAGCCCTTGACCTCTCAGCAACTACAGTGTAT...AGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR TCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCACGTAGGGAGGGTTGCTaGCAATCAGGTCCATGGGGC +
Preference number: 4 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRARREGC*QSGPWG
Trigger: GCCCCATGGACCTGATTGTCAGCAACCCTCCCTACG...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTTCAGCCACTCTGATGTaGTGGAGCCAATCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATSATLM*WSQSRC
Trigger: ACACCTGGATTGGCTCCATCACATCAGAGTGGCTGA...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp CCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTTGCCCTCAGCCACTCTaGTGTGATGGAGCCAATCCA +
Preference number: 4 (lower is better)
Translates to: PIPPQQFHQHRATALSHSCPQPL*CDGANP
Trigger: TGGATTGGCTCCATCACATCAGAGTGGCTGAGGGCA...AGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCATCAATCCCTGGGAGTaGGCTGCTCTATGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALINPWE*AALCQD
Trigger: GTCCTGGCATAGAGCAGCTCACTCCCAGGGATTGAT...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCGCAGGCAGTCATCCTTaGGCCAAAACGCAGATGAGC +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALAGSHP*AKTQMS
Trigger: GCTCATCTGCGTTTTGGCTCAAGGATGACTGCCTGC...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTGCCTCCTGGTGGCCATaGGTCTGCACAGACCAGAGC +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTASWWP*VCTDQS
Trigger: GCTCTGGTCTGTGCAGACTCATGGCCACCAGGAGGC...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCGCCTCCTGGTGGCCATaGGTCTGCACAGACCAGAGC +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTASWWP*VCTDQS
Trigger: GCTCTGGTCTGTGCAGACTCATGGCCACCAGGAGGC...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTGCTGGGAGCTGCAGTGTaGCCTCTACCAAATGTGTCC +
Preference number: 4 (lower is better)
Translates to: PPQQFHQHRATALSHSDVLGAAV*PLPNVS
Trigger: GGACACATTTGGTAGAGGTCACACTGCAGCTCCCAG...CACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGTCAGGGCAGCTACCCTaGGATGCTGCTGAAGACAGC +
Preference number: 4 (lower is better)
Translates to: VAQGSGALESSKWPLLNLSGQLP*DAAEDS
Trigger: GCTGTCTTCAGCAGCATCTCAGGGTAGCTGCCCTGA...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCCATCAGATGGACGCCTaGGGGCACTGGGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFHQMDA*GHWVLP
Trigger: AGGAAGGACCCAGTGCCCTCAGGCGTCCATCTGATG...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCCTGCAAGTGCTCCTTaGCATATGCTGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPPASAP*HMLVVV
Trigger: CACCACCACCAGCATATGTCAAGGAGCACTTGCAGG...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTAGCCTACTCAGAGCACTaGTGGGGCCTTGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLAYSEH*WGLGRG
Trigger: GCCCCTCCCAAGGCCCCATCAGTGCTCTGAGTAGGC...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGGGGATCAGGTGCACTTaGGTCTTCGAAGTGGCCATT +
Preference number: 4 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILGIRCT*VFEVAI
Trigger: AATGGCCACTTCGAAGACTCAAGTGCACCTGATCCC...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTGGGATCAGGTGCACTTaGGTCTTCGAAGTGGCCATT +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATGIRCT*VFEVAI
Trigger: AATGGCCACTTCGAAGACTCAAGTGCACCTGATCCC...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACATGGCTGGGGGCTGGCTaGAGCCAAGAGCTCCAGGAA +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTWLGAG*SQELQE
Trigger: TTCCTGGAGCTCTTGGCTTCAGCCAGCCCCCAGCCA...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGAATACAGGGCAGAAGGTCATaGGGAGGAGATCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: ATSSSTHSTSSSVSGRGIQGRRS*GGDQVT
Trigger: AGTGACCTGATCTCCTCCTCATGACCTTCTGCCCTG...TATTCCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR TCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCGGACTGCATTCTTCTTaGGGCCCCAGAGGAGAAGAG +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALGLHSS*GPRGEE
Trigger: CTCTTCTCCTCTGGGGCCTCAAGAAGAATGCAGTCC...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCCTTGGTCCCAGTCTCTaGGGTCCTCTCTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGLGPSL*GPLWTQ
Trigger: CTGGGTCCAGAGAGGACCTCAGAGACTGGGACCAAG...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCCTTGGTCCCAGTCTCTaGGGTCCTCTCTGGACCCAG +
Preference number: 4 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFLGPSL*GPLWTQ
Trigger: CTGGGTCCAGAGAGGACCTCAGAGACTGGGACCAAG...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTGGCCAAGCTGACCCTTaGACCCAGGTGTCCATGCTC +
Preference number: 4 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWAGQADP*TQVSML
Trigger: GAGCATGGACACCTGGGTTCAAGGGTCAGCTTGGCC...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCGCAATGGTCAGTTATTaGGCTGTGGAGTGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLAMVSY*AVECLQ
Trigger: TTGAAGGCACTCCACAGCTCAATAACTGACCATTGC...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGGTAAACAATTATCTGTaGGAATCAGCGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLVNNYL*ESAVTL
Trigger: CAAAGTGACCGCTGATTCTCACAGATAATTGTTTAC...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTACTCCTGAGCTCGGGTaGTCTGCCTGCTTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCTPELG*SACFSL
Trigger: GAGGCTGAAGCAGGCAGATCACCCGAGCTCAGGAGT...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AACGTGGATGTGCGACCCAGGAACTGTGCAGCAAAGACCTCCAGACCCTCCCCTGCATGTGGCCCAGATTaGTTTGCTGTGACAGATGCT +
Preference number: 4 (lower is better)
Translates to: NVDVRPRNCAAKTSRPSPACGPD*FAVTDA
Trigger: AGCATCTGTCACAGCAAATCAATCTGGGCCACATGC...AGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGTGGCCCTCTTTTCTATaGCATGGGGCAGTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWWPSFL*HGAVFE
Trigger: CTCAAACACTGCCCCATGTCATAGAAAAGAGGGCCA...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGATCTCCTGACCTCGTaGTCCACCCGACTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDDLLTS*STRLSL
Trigger: GAGGCTGAGTCGGGTGGATCACGAGGTCAGGAGATC...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTCCTTCCGCTTGGCTGTaGGTTGTATTCTCCTGCCCA +
Preference number: 4 (lower is better)
Translates to: PIPPQQFHQHRATALSHSPSAWL*VVFSCP
Trigger: TGGGCAGGAGAATACAACTCACAGCCAAGCGGAAGG...AGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTGGGTCACAAGCTCTGGTaGCCCAAAATGGCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: PPQQFHQHRATALSHSDVGHKLW*PKMALV
Trigger: GACCAGAGCCATTTTGGGGCACCAGAGCTTGTGACC...CACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTTGCACCGGCATCCTCTaGAATCGACGGCTACTCAGC +
Preference number: 4 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPCTGIL*NRRLLS
Trigger: GCTGAGTAGCCGTCGATTGCAGAGGATGCCGGTGCA...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTATCTCAGGGGCCAGCTaGTCCATGTCCTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPISGAS*SMSWWK
Trigger: CTTCCACCAGGACATGGAGCAGCTGGCCCCTGAGAT...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACGGGGTCTTCATAGCTaGGGATCTCAGGGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPRGLHS*GSQGPA
Trigger: AGCTGGCCCCTGAGATCCGCAGCTATGAAGACCCCG...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCTGACAAGCTCCGGGTaGCTTGGGTCCACTTCTAAG +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPLTSSG*LGSTSK
Trigger: CTTAGAAGTGGACCCAAGGCACCCGGAGCTTGTCAG...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTCCAGACCTCCGGATATaGAGGAACCGGGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTPDLRI*RNRGLP
Trigger: TGGGAGGCCCCGGTTCCTGCATATCCGGAGGTCTGG...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCCCCATCAGACCATACTaGCAGGCCCTGGGAAGTGCC +
Preference number: 4 (lower is better)
Translates to: TLLAISPDTPTAISPTQSPIRPY*QALGSA
Trigger: GGCACTTCCCAGGGCCTGGCAGTATGGTCTGATGGG...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCTGCAGCAGAGGATGCTaGCTATTGGACCATACTGCC +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPCSRGC*LLDHTA
Trigger: GGCAGTATGGTCCAATAGGCAGCATCCTCTGCTGCA...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCTGCCCAAGGTCCCACTaGAGGACACAGCCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFCPRSH*RTQPWN
Trigger: GTTCCAGGGCTGTGTCCTGCAGTGGGACCTTGGGCA...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCCATAGGGAAAGGAGTTaGCCAAGGTCCCACTGCAGG +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALHRERS*PRSHCR
Trigger: CCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATG...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGATTCAGATGCCAGCATaGACATTCCACTTGACTAAG +
Preference number: 4 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGIQMPA*TFHLTK
Trigger: CTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAAT...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCGTACATACCTTCTCTTaGTCTCCATGCCTGGCGAAT +
Preference number: 4 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLVHTFS*SPCLAN
Trigger: ATTCGCCAGGCATGGAGAGCAAGAGAAGGTATGTAC...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCTGGGGCACTGGGAGCTaGAGTGTGACCTCTACCAAA +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALWGTGS*SVTSTK
Trigger: TTTGGTAGAGGTCACACTGCAGCTCCCAGTGCCCCA...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTTGGGGCACTGGGAGCTaGAGTGTGACCTCTACCAAA +
Preference number: 4 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPWGTGS*SVTSTK
Trigger: TTTGGTAGAGGTCACACTGCAGCTCCCAGTGCCCCA...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGGCTTGTGGCCCCAGCTaGCCCGACAGTGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKACGPS*PDSVTL
Trigger: GAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAGC...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CTGGTGGAAGACGTAGGGAGGGTTGCTGACAATCAGGTCCATGGGGCCCCAGGGTCAGCAGAGTCAAGCTaGACATTTTTCTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: LVEDVGRVADNQVHGAPGSAESS*TFFWAE
Trigger: TTCTGCCCAGAAAAATGTGCAGCTTGACTCTGCTGA...CCCTGGGGCCCCATGGACCTGATTGTCAGCAACCCTCCCTACGTCTTCCACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCGAAGGCAAGGAAAAATaGCACAATGTGCCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: GSGHISQDLRGLHSLDSIEGKEK*HNVPSQ
Trigger: CTGGCTTGGCACATTGTGGCATTTTTCCTTGCCTTC...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGACTGCCTTGTATCCCTaGCTGCCTTATGTTGGTCCC +
Preference number: 4 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILTALYP*LPYVGP
Trigger: GGGACCAACATAAGGCAGGCAGGGATACAAGGCAGT...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTCCCTTCTTTCCAGACTaGCTTGTATCCCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: PIPPQQFHQHRATALSHSPFFPD*LVSLPA
Trigger: GGCAGGCAGGGATACAAGGCAGTCTGGAAAGAAGGG...AGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTTCCTCCCATTCTGCCTaGAAGTGCTCCTTGACATAT +
Preference number: 4 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSSSHSA*KCSLTY
Trigger: ATATGTCAAGGAGCACTTGCAGGCAGAATGGGAGGA...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCAAGGAAACCTGGCGCCTaGTCCTACTGCCGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPRKPGA*SYCRQG
Trigger: TCCTTGGCGGCAGTAGGAGCAGGCGCCAGGTTTCCT...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCCCCTTCTGGGACCCATaGTGGTCAGTCTTTCAGTCT +
Preference number: 4 (lower is better)
Translates to: IPRYPHSNFTNTEQLPSAPFWDP*WSVFQS
Trigger: AGACTGAAAGACTGACCAGCATGGGTCCCAGAAGGG...GGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCGAACCCAGGTGTCCATaGTCTCTGTCCCCCAGCTTC +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLEPRCP*SLSPSF
Trigger: GAAGCTGGGGGACAGAGAGCATGGACACCTGGGTTC...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCTATGCAACCTGACCTaGAACTGCACCCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPLCNLT*NCTLLS
Trigger: GCTCAGCAGGGTGCAGTTGCAGGTCAGGTTGCATAG...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCCCTACCCGCATGTCTaGAGAACTCCAGGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATPYPHV*RTPGFC
Trigger: ACAAAAGCCTGGAGTTCTGCAGACATGCGGGTAGGG...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGCAGACGCCCCAATGCTaGTTCTCGGATATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWQTPQC*FSDILK
Trigger: CTTCAGAATATCCGAGAAGCAGCATTGGGGCGTCTG...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTCAGACGCCCCAATGCTaGTTCTCGGATATTCTGAAG +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSQTPQC*FSDILK
Trigger: CTTCAGAATATCCGAGAAGCAGCATTGGGGCGTCTG...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTTCTGCCTGGCCCCTTTaGTGTGGGCGTGAAAATCTG +
Preference number: 4 (lower is better)
Translates to: PIPPQQFHQHRATALSHSSAWPL*CGRENL
Trigger: CAGATTTTCACGCCCACAGCAAAGGGGCCAGGCAGA...AGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCGACACATCCATCTGGTaGCTCATCCCAGAACCTCAC +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPDTSIW*LIPEPH
Trigger: GTGAGGTTCTGGGATGAGGCACCAGATGGATGTGTC...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGGACACATCCATCTGGTaGCTCATCCCAGAACCTCAC +
Preference number: 4 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILDTSIW*LIPEPH
Trigger: GTGAGGTTCTGGGATGAGGCACCAGATGGATGTGTC...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAAAAGTGTGAGCCACCCTaGACGGCCCCTTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQKCEPP*TAPFFL
Trigger: CAGAAAGAAAGGGGCCGTGCAGGGTGGCTCACACTT...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTATCCAAGGGAGGCCCTaGGTGGACACCTATGATTAT +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSIQGRP*VDTYDY
Trigger: ATAATCATAGGTGTCCACGCAGGGCCTCCCTTGGAT...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCAGCTTACATGGGCTCTaGGCTCCCATGACTTGGAGG +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCSLHGL*APMTWR
Trigger: CCTCCAAGTCATGGGAGCGCAGAGCCCATGTAAGCT...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCGTGGTTCTCAGGGGGTaGCAAGCTCCAAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALVVLRG*QAPSMK
Trigger: CTTCATGCTTGGAGCTTGGCACCCCCTGAGAACCAC...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTTTGCCTCGGGCACAGTaGTCCAGGTCTCCTCCCACA +
Preference number: 4 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCLPRAQ*SRSPPT
Trigger: TGTGGGAGGAGACCTGGAGCACTGTGCCCGAGGCAA...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCCCTAAACTAGCCCTCTaGACTAGGGGATGGACGCAA +
Preference number: 4 (lower is better)
Translates to: IPRYPHSNFTNTEQLPSAPKLAL*TRGWTQ
Trigger: TTGCGTCCATCCCCTAGTGCAGAGGGCTAGTTTAGG...GGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTTACCCACCTGGCCTCTaGAGCAGAGAAAACCTCAGC +
Preference number: 4 (lower is better)
Translates to: PIPPQQFHQHRATALSHSYPPGL*SRENLS
Trigger: GCTGAGGTTTTCTCTGCTGCAGAGGCCAGGTGGGTA...AGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGATACCCACCTGGCCTCTaGAGCAGAGAAAACCTCAGC +
Preference number: 4 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGYPPGL*SRENLS
Trigger: GCTGAGGTTTTCTCTGCTGCAGAGGCCAGGTGGGTA...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGTCACTCTGTAGGAACTaGGGTTCAGGGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILSLCRN*GSGKWC
Trigger: GCACCACTTCCCTGAACCGCAGTTCCTACAGAGTGA...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCTCCCCTGCGTTGTTTaGAGGAGAGGTCTGGAGGAA +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPLPCVV*RRGLEE
Trigger: TTCCTCCAGACCTCTCCTGCAAACAACGCAGGGGAG...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCGGAAACCTCTTCCTTTaGGTGGCTCCCCTGCGTTGT +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCGNLFL*VAPLRC
Trigger: ACAACGCAGGGGAGCCACGCAAAGGAAGAGGTTTCC...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCCAGCCCAAGGGGATTaGTCCGAGCTGGCGTTTAGG +
Preference number: 4 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWAPAQGD*SELAFR
Trigger: CCTAAACGCCAGCTCGGAGCAATCCCCTTGGGCTGG...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434410.5
CDS-3UTR CCA 90 bp CCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTTCTGGTGCCCCAAAATaGCTCTGGTCCTCAGATATA +
Preference number: 4 (lower is better)
Translates to: PQHGTSGPPLPAPTQPVPSGAPK*LWSSDI
Trigger: TATATCTGAGGACCAGAGCCATTTTGGGGCACCAGA...AGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR CCA 90 bp TGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTAGAGGTCACAAGCTCTaGTGCCCCAAAATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: WDLWATSSSTHSTSSSVSRGHKL*CPKMAL
Trigger: CAGAGCCATTTTGGGGCACCAGAGCTTGTGACCTCT...AGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR CCA 90 bp CCCTGGAAGTCCCACTCTCCAAGGATGTACTGCACCGGCATCCTCTGCAATCGAAGAGGTCACAAGCTCTaGTGCCCCAAAATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: PWKSHSPRMYCTGILCNRRGHKL*CPKMAL
Trigger: CAGAGCCATTTTGGGGCACCAGAGCTTGTGACCTCT...TCGATTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR CCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCTGGACCCAGCTGGGTaGAGATGGAGAGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLLDPAG*RWRGHK
Trigger: CTTGTGACCTCTCCATCTCCACCCAGCTGGGTCCAG...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp TGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCTGAGAGTGGCCCCTaGACCCAGCTGGGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: WGNHRTLGNAIRTWALESAESGP*TQLGGD
Trigger: ATCTCCACCCAGCTGGGTCCAGGGGCCACTCTCAGC...ACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp ATGGGTCAGAGAGATAGCAGCTTCCCGCTTATCCACAGCAATGACTCGGCTCTGCCAGCCAGAGGTGGTTaGGGTTGCCATGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: MGQRDSSFPLIHSNDSALPARGG*GCHELK
Trigger: CTTCAGCTCATGGCAACCCCAACCACCTCTGGCTGG...CAGAGCCGAGTCATTGCTGTGGATAAGCGGGAAGCTGCTATCTCTCTGACCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCAGCCAGAGGTGGTTaGGGTTGCCATGAGCTGAAG +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLPARGG*GCHELK
Trigger: CTTCAGCTCATGGCAACCCCAACCACCTCTGGCTGG...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp CTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGCAGTTCCTCTGTTTCTaGCCGAGGAATAAACACTGG +
Preference number: 4 (lower is better)
Translates to: LGHLFQHPLNQFLCFWPRQFLCF*PRNKHW
Trigger: CCAGTGTTTATTCCTCGGCCAGAAACAGAGGAACTG...CCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR CCA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTACAGCATGGGACCTCTaGGCCACCTCTTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWATAWDL*ATSSST
Trigger: GGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGT...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTAATGAGGGGGCTGCCTaGGGATCCCACAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWANEGAA*GSHSMG
Trigger: TCCCATGCTGTGGGATCCCCAGGCAGCCCCCTCATT...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCGAGGTCATGTCGAGGTaGATGATCCAAATCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSEVMSR*MIQILS
Trigger: GGACAGGATTTGGATCATCCACCTCGACATGACCTC...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCAGGGCAGCCATGCTATaGCCCAGACCTCCGGATATG +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLRAAML*PRPPDM
Trigger: CATATCCGGAGGTCTGGGCCATAGCATGGCTGCCCT...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTGACGGCCAGCCCTGCTaGGGCAGAAGGAAACCCTTG +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTDGQPC*GRRKPL
Trigger: CAAGGGTTTCCTTCTGCCCCAGCAGGGCTGGCCGTC...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTCTATGCCAGGACCCATaGTATCCAAGGCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPLCQDP*YPRPGV
Trigger: CACTCCTGGCCTTGGATACCATGGGTCCTGGCATAG...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CTGCTCCATGTCCTGGTGGAAGACGTAGGGAGGGTTGCTGACAATCAGGTCCATAGTTGGCGTTGGCCCTaGACTCAGAAGAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: LLHVLVEDVGRVADNQVHSWRWP*TQKSQL
Trigger: AAGCTGGCTCTTCTGAGTCCAGGGCCAACGCCAACT...ATGGACCTGATTGTCAGCAACCCTCCCTACGTCTTCCACCAGGACATGGAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATTGGGCCTCAAGGCACTaGGGCCATAGTGAGGAGAGG +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDWASRH*GHSEER
Trigger: CCTCTCCTCACTATGGCCCCAGTGCCTTGAGGCCCA...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCTCGAGTCTCTGGCTTTaGCCTCAGGAGCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: GSSLQLNERGCATQELCSSSLWL*PQEQGR
Trigger: CCTCCCTTGCTCCTGAGGCCAAAGCCAGAGACTCGA...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGAATATGCTGGTGGTGGTaGGGAGGCTGTTCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGICWWW*GGCSSL
Trigger: GAGACTCGAACAGCCTCCCCACCACCACCAGCATAT...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAACTCCTTGACATATGCTaGTGGTGGTGGGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQLLDIC*WWWGGC
Trigger: ACAGCCTCCCCACCACCACCAGCATATGTCAAGGAG...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGACTCCTTGACATATGCTaGTGGTGGTGGGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGLLDIC*WWWGGC
Trigger: ACAGCCTCCCCACCACCACCAGCATATGTCAAGGAG...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCGTTTGGGGCAAGGATTaGGAGCAGCCAATAGCCCAG +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALVWGKD*EQPIAQ
Trigger: CTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAAC...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGGAAAAGAATCGAAGGTaGATAGGGAAAGACATGCTG +
Preference number: 4 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGEKNRR*IGKDML
Trigger: CAGCATGTCTTTCCCTATCCACCTTCGATTCTTTTC...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCATTGTTTGCACCGCCTaGGCAAAGGGAAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSIVCTA*AKGRCV
Trigger: CACACACCTTCCCTTTGCCCAGGCGGTGCAAACAAT...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTAGGTTTCTGAAGGCATaGTACAGAAGGTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSRFLKA*YRRCQQ
Trigger: CTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCT...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCCTGTTCTCCTGGTGTaGCTGTTGCGCAGGGATCAG +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHPVLLV*LLRRDQ
Trigger: CTGATCCCTGCGCAACAGCCACACCAGGAGAACAGG...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGGAGCAGGAACAGGCTTaGTCCCAGTCTCTGAGGTCC +
Preference number: 4 (lower is better)
Translates to: VAQGSGALESSKWPLLNLEQEQA*SQSLRS
Trigger: GGACCTCAGAGACTGGGACCAAGCCTGTTCCTGCTC...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCACACCCAAGGGGTCCTaGGCCAGTCACATAACTCCA +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCTPKGS*ASHITP
Trigger: TGGAGTTATGTGACTGGCCCAGGACCCCTTGGGTGT...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTCCTAGTCCCAGCTTaGACAGGGACAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDVLVPA*TGTGLR
Trigger: CCTCAGCCCTGTCCCTGTCCAAGCTGGGACTAGGAC...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAATCTCCATGTGGCTCCTaGGTTAGGACTGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQSPCGS*VRTGFR
Trigger: CCTGAAGCCAGTCCTAACCCAGGAGCCACATGGAGA...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGGCCCAGAGGGCTTTATaGGCCAGAATCCCTGGGTTT +
Preference number: 4 (lower is better)
Translates to: RSHPREGQILGLKSRLVWAQRAL*ARIPGF
Trigger: AAACCCAGGGATTCTGGCCCATAAAGCCCTCTGGGC...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGACCCAGGGCTACAGTTaGCCTAATGTGACTCTTACC +
Preference number: 4 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWTQGYS*PNVTLT
Trigger: GGTAAGAGTCACATTAGGCCAACTGTAGCCCTGGGT...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATCATAGCTGGGGCAGGTaGAGGTCAGCCCAGTTCAGG +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDHSWGR*RSAQFR
Trigger: CCTGAACTGGGCTGACCTCCACCTGCCCCAGCTATG...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCACTAGTTTGCTTTGCTTaGTCACGTAGCTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPLVCFA*SRSSAS
Trigger: TGAGGCTGAGCTACGTGACCAAGCAAAGCAAACTAG...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCGAGAGACTGAGGCCCTaGCCCTATACCTCAGGAGAT +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCERLRP*PYTSGD
Trigger: ATCTCCTGAGGTATAGGGCCAGGGCCTCAGTCTCTC...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATTCCCTGGGCCCACTGTaGTCCTGGCCATCTCACATC +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDSLGPL*SWPSHI
Trigger: GATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGA...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGCTCAAGGGTTGCCTTTaGACTGTGTCCCCACATGGT +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRLKGCL*TVSPHG
Trigger: ACCATGTGGGGACACAGTCCAAAGGCAACCCTTGAG...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTGTTCAAACTCCAGCATaGCCAGCTGCTGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPVQTPA*PAAGCV
Trigger: CACACAGCCAGCAGCTGGCCATGCTGGAGTTTGAAC...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCCTTTCCCCTTCACCCTaGAGCCCACGTTGGCTGTGG +
Preference number: 4 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFLSPSP*SPRWLW
Trigger: CCACAGCCAACGTGGGCTCCAGGGTGAAGGGGAAAG...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACAGTCTGGAACTGGGCTaGGTGTCTGTCAGTCCACGC +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHSLELG*VSVSPR
Trigger: GCGTGGACTGACAGACACCCAGCCCAGTTCCAGACT...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AACGTGGATGTGCGACCCAGGAACTGTGCAGCAAAGACCTCCAGACCCTCCCCTACTCAACTTTCAGTCTaGAACTGGGCTGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: NVDVRPRNCAAKTSRPSPTQLSV*NWAGCL
Trigger: CAGACACCCAGCCCAGTTCCAGACTGAAAGTTGAGT...AGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACAGGGAGCCTCAGGCTATaGGGGCTGGAGCAGTTGGGG +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTGSLRL*GLEQLG
Trigger: CCCCAACTGCTCCAGCCCCCATAGCCTGAGGCTCCC...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACAGTGACAGATGCTGGGTaGGAGGTGCCGGGAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTVTDAG*EVPGAS
Trigger: TGAGGCTCCCGGCACCTCCCACCCAGCATCTGTCAC...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGTTGGGGCAACCACACTaGAGCCTGGTGGGGCTCCCA +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTELGQPH*SLVGLP
Trigger: TGGGAGCCCCACCAGGCTCCAGTGTGGTTGCCCCAA...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGCCCCTTCCCCAACTTTaGGAAGGTGGTCTCAGCCCT +
Preference number: 4 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMPLPQL*EGGLSP
Trigger: AGGGCTGAGACCACCTTCCCAAAGTTGGGGAAGGGG...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGACATACACGTACGTGTaGGTGCCTGTGCAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILTYTYV*VPVQGC
Trigger: ACACCCTTGCACAGGCACCCACACGTACGTGTATGT...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCGGACATGGACCCAGTTaGCCAGGTGCAGTGGCTCAC +
Preference number: 4 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFGHGPS*PGAVAH
Trigger: GTGAGCCACTGCACCTGGCCAACTGGGTCCATGTCC...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACTTGGTTTCCAGAGCCTaGAGCTCCCCCATCCAAGGG +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHLVSRA*SSPIQG
Trigger: CCCTTGGATGGGGGAGCTCCAGGCTCTGGAAACCAA...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTCATGCAACCCTGGCTTaGTTTCCAGAGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPHATLA*FPEPGA
Trigger: AGCTCCAGGCTCTGGAAACCAAGCCAGGGTTGCATG...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCATGCGCTCCCATGACTTaGAGGCAGTGGTTGGGCCTC +
Preference number: 4 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRACAPMT*RQWLGL
Trigger: GAGGCCCAACCACTGCCTCCAAGTCATGGGAGCGCA...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCAGATGTGGATAAGGTCTaGTTCATTTCCCTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPDVDKV*FISLPD
Trigger: GTCTGGGAGGGAAATGAACCAGACCTTATCCACATC...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCCCAGGCGGGTTTGCTaGGAGAATCACCAGCCTCCA +
Preference number: 4 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWAPRRVC*ENHQPP
Trigger: TGGAGGCTGGTGATTCTCCCAGCAAACCCGCCTGGG...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTTGGAAATCCTGGGGTTaGTTAGTGAAAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSWKSWG*LVKAGR
Trigger: CCTCCCAGCTTTCACTAACCAACCCCAGGATTTCCA...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCATGCTGGAGGGAGGCTaGCAACAGGGGAAAGTTCCA +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCMLEGG*QQGKVP
Trigger: TGGAACTTTCCCCTGTTGCCAGCCTCCCTCCAGCAT...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGCGCACAGGACCTTGTTaGGCCTTCGGAGGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: RSHPREGQILGLKSRLVWRTGPC*AFGGEV
Trigger: TACTTCTCCTCCGAAGGCCCAACAAGGTCCTGTGCG...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCCCTCTACAATTTGTCTaGCCCCCACCCCTCACCCTG +
Preference number: 4 (lower is better)
Translates to: GSSLQLNERGCATQELCSPLQFV*PPPLTL
Trigger: CAGGGTGAGGGGTGGGGGCCAGACAAATTGTAGAGG...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCCTCCTCAAGACCAAGTaGAAGGGAAGAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGLLKTK*KGRALQ
Trigger: TTGCAGAGCTCTTCCCTTCCACTTGGTCTTGAGGAG...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCCTCTGCACTAGGGGATaGACGCAAGCTGGCTGTCCC +
Preference number: 4 (lower is better)
Translates to: TLLAISPDTPTAISPTQSLCTRG*TQAGCP
Trigger: GGGACAGCCAGCTTGCGTCCATCCCCTAGTGCAGAG...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAAACCTCTTCCTTTGCGTaGCTCCCCTGCGTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQTSSFA*LPCVVC
Trigger: GCAAACAACGCAGGGGAGCCACGCAAAGGAAGAGGT...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCTTAGAGCACCTGCCCTaGAGTCCCAGCAGTATCAAT +
Preference number: 4 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGLEHLP*SPSSIN
Trigger: ATTGATACTGCTGGGACTCCAGGGCAGGTGCTCTAA...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGTCCTCAGATATAGTTaGTTGCCACCCCGAGTCCAC +
Preference number: 4 (lower is better)
Translates to: WDLWATSSSTHSTSSSVSVLRYS*LPPRVH
Trigger: GTGGACTCGGGGTGGCAACCAACTATATCTGAGGAC...AGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424388.1
CDS-3UTR CCA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTAGGCCGGGAGGTGTGTaGGCGGAGCCCAGTAGCCTG +
Preference number: 4 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCRPGGV*AEPSSL
Trigger: CAGGCTACTGGGCTCCGCCCACACACCTCCCGGCCT...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434410.5
CDS-3UTR CCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGCCCTTCTGGGCTGCTTaGGCTGGCGAGGTGAGGGTC +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQPFWAA*AGEVRV
Trigger: GACCCTCACCTCGCCAGCCCAAGCAGCCCAGAAGGG...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGTACATGGGGGAGAAATaGGTGGGCTCAGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: RSHPREGQILGLKSRLVWYMGEK*VGSAGQ
Trigger: CTGTCCTGCTGAGCCCACCCATTTCTCCCCCATGTA...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448997.5
3UTR CAA 72 bp CAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATaGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: QGSGALESSKWP*LNLNGCLGRAE
Trigger: TTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 72 bp GGGTTGCCTTTGGACTGTGTCCCCACATGGTCACATTaGCATCTCCAGACGCCCCAATGCTGCTTCTCGGAT +
Preference number: 4 (lower is better)
Translates to: GLPLDCVPTWSH*HLQTPQCCFSD
Trigger: ATCCGAGAAGCAGCATTGGGGCGTCTGGAGATGCAAATGTGACCATGTGGGGACACAGTCCAAAGGCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp GTGTGGAAACCTCTTCCTTTGCGTGGCTCCCCTGCGTaGTTTGCAGGAGAGGTCTGGAGGAAAGAGAGTCAC +
Preference number: 4 (lower is better)
Translates to: VWKPLPLRGSPA*FAGEVWRKESH
Trigger: GTGACTCTCTTTCCTCCAGACCTCTCCTGCAAACAACGCAGGGGAGCCACGCAAAGGAAGAGGTTTCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp CAGCAGTATCAATCCCAGGTGTGGAAACCTCTTCCTTaGCGTGGCTCCCCTGCGTTGTTTGCAGGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: QQYQSQVWKPLP*RGSPALFAGEV
Trigger: GACCTCTCCTGCAAACAACGCAGGGGAGCCACGCAAAGGAAGAGGTTTCCACACCTGGGATTGATACTGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAAGAGGGAGATGGCTCCTaGTCCGCAGCCCACCTCCAG +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQEGDGS*SAAHLQ
Trigger: CTGGAGGTGGGCTGCGGATCAGGAGCCATCTCCCTC...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
CDS-3UTR TCA 90 bp GCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGAATATGCAACCGAAGCCTCTaGGCATTCTCATGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: ATSSSTHSTSSSVSGRGICNRSL*AFSWVR
Trigger: TCTGACCCATGAGAATGCTCAGAGGCTTCGGTTGCA...TATTCCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR TCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGATCAGGCTGGCGGCACTaGCAAGGCATCCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRSGWRH*QGIHRA
Trigger: TGCCCTGTGGATGCCTTGTCAGTGCCGCCAGCCTGA...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATTCAGGCTGGCGGCACTaGCAAGGCATCCACAGGGCA +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHSGWRH*QGIHRA
Trigger: TGCCCTGTGGATGCCTTGTCAGTGCCGCCAGCCTGA...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCAGCCACTCTGATGTaGTGGAGCCAATCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQSATLM*WSQSRC
Trigger: ACACCTGGATTGGCTCCATCACATCAGAGTGGCTGA...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTTGCCCTCAGCCACTCTaGTGTGATGGAGCCAATCCA +
Preference number: 4 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPCPQPL*CDGANP
Trigger: TGGATTGGCTCCATCACATCAGAGTGGCTGAGGGCA...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCTGCCCTCAGCCACTCTaGTGTGATGGAGCCAATCCA +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLCPQPL*CDGANP
Trigger: TGGATTGGCTCCATCACATCAGAGTGGCTGAGGGCA...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTATTTCCTGTCGCTGTTaGCAGGAAGGCTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPISCRC*QEGWIC
Trigger: GCAGATCCAGCCTTCCTGTCAACAGCGACAGGAAAT...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTTTGGTCACTGTCATGTaGCCTCAGGCAGTACATACC +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATLVTVM*PQAVHT
Trigger: GGTATGTACTGCCTGAGGTCACATGACAGTGACCAA...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCGGCAGATTCTGGGATTaGAATCCAGGCTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: GSSLQLNERGCATQELCSGRFWD*NPGWCG
Trigger: GCCACACCAGCCTGGATTTCAATCCCAGAATCTGCC...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCGAAGCCAAGGCTGAGTaGGGTGAAGTCATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLEAKAE*GEVICP
Trigger: TGGGCAGATGACTTCACCTCACTCAGCCTTGGCTTC...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCTTTCTTCCGTCACTCTaGCACTCCTGCCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: SVHATHIRSTSESGFSGSFLPSL*HSCLLY
Trigger: GTAAAGGAGGCAGGAGTGTCAGAGTGACGGAAGAAA...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCGACAGGCGGGCTGAGTaGAATGATGAAGAAACAGTG +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPDRRAE*NDEETV
Trigger: CACTGTTTCTTCATCATTTCACTCAGCCCGCCTGTC...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCGACAGAAAGGAGGGGTaGTACTGGGGCCCTAGGGTT +
Preference number: 4 (lower is better)
Translates to: TLLAISPDTPTAISPTQSDRKEG*YWGPRV
Trigger: AACCCTAGGGCCCCAGTATCACCCCTCCTTTCTGTC...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGTGCAAGGGTGTGTaGGTCTCTATGCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATLCKGV*VSMLCT
Trigger: TGTACACAGCATAGAGACTCACACACCCTTGCACAG...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATCAAGGCCCACGCCCATaGACATACACGTACGTGTGG +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDQGPRP*TYTYVW
Trigger: CCACACGTACGTGTATGTTCATGGGCGTGGGCCTTG...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTGCTGCGTGGACACCTATaGTTATGGACATGGACCCAG +
Preference number: 4 (lower is better)
Translates to: PPQQFHQHRATALSHSDVLRGHL*LWTWTQ
Trigger: CTGGGTCCATGTCCATAATCATAGGTGTCCACGCAG...CACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCGATCTCCTGACCTCGTaGTCCACCCGACTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTDLLTS*STRLSL
Trigger: GAGGCTGAGTCGGGTGGATCACGAGGTCAGGAGATC...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCGTCATGGGCCCTCTCTaGGCTTTGGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCVMGPL*ALALFS
Trigger: AGAAAAGAGAGCCAAAGCTCAGAGAGGGCCCATGAC...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCCCTCACCTTGCTGTGTaGCACTGGGCAAGTCATGGG +
Preference number: 4 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPPHLAV*HWASHG
Trigger: CCCATGACTTGCCCAGTGTCACACAGCAAGGTGAGG...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTGCCAAGCTCCAAGCATaGAGCCAAAAAGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPAKLQA*SQKGQG
Trigger: TCCCTGACCTTTTTGGCTTCATGCTTGGAGCTTGGC...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACAGGAGGTGGGAATaGGGGGACAGATGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: TLLAISPDTPTAISPTQSNRRWE*GDRCWR
Trigger: CCTCCAGCATCTGTCCCCTCATTCCCACCTCCTGTT...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGGGCCTGGCACCCAGTTaGTGGTGCTCAGGGTACAGA +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMGLAPS*WCSGYR
Trigger: TCTGTACCCTGAGCACCATCAACTGGGTGCCAGGCC...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTAAAGTGAACCTTCCATaGGGGGCACAGCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCKVNLP*GAQPWC
Trigger: GCACCAGGGCTGTGCCCCTCATGGAAGGTTCACTTT...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGGCCATGAACTCCTTATaGGTAGGGACCGTGTCAATT +
Preference number: 4 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWAMNSL*VGTVSI
Trigger: AATTGACACGGTCCCTACTCATAAGGAGTTCATGGC...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGATGAGGTCAAGAGATTaGGACCATCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWMRSRD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTCTTGACCTCAT...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGGGTCACAAGCTCTGGTaGCCCAAAATGGCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMGHKLW*PKMALV
Trigger: GACCAGAGCCATTTTGGGGCACCAGAGCTTGTGACC...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATCCCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCAGGTTCCCAAGTCTaGTTTATGATGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: IPQHGTSGPPLPAPTQPVPGSQV*FMMSAA
Trigger: AGCAGCTGACATCATAAAGCAGACTTGGGAACCTGG...AACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR GCA 90 bp ACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTAAAGGTTCTCCAGAGTaGTTCCAGGTTCCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: TAWDLWATSSSTHSTSSSKGSPE*FQVPKS
Trigger: AGACTTGGGAACCTGGAAGCACTCTGGAGAACCTTT...AGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR GCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATTGCACCGGCATCCTCTaGAATCGACGGCTACTCAGC +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDCTGIL*NRRLLS
Trigger: GCTGAGTAGCCGTCGATTGCAGAGGATGCCGGTGCA...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCTCTCCAAGGATGTACTaGACCGGCATCCTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: SVHATHIRSTSESGFSGSSPRMY*TGILCN
Trigger: ATTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGA...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCATCTCAGGGGCCAGCTaGTCCATGTCCTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGISGAS*SMSWWK
Trigger: CTTCCACCAGGACATGGAGCAGCTGGCCCCTGAGAT...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATTTTCAGGAGCCGGGGTaGCAAGGCCAGAATGTGGGT +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDFQEPG*QGQNVG
Trigger: ACCCACATTCTGGCCTTGGCACCCCGGCTCCTGAAA...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCATTTCAGGAGCCGGGGTaGCAAGGCCAGAATGTGGGT +
Preference number: 4 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRAFQEPG*QGQNVG
Trigger: ACCCACATTCTGGCCTTGGCACCCCGGCTCCTGAAA...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCATTTCAGGAGCCGGGGTaGCAAGGCCAGAATGTGGGT +
Preference number: 4 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPFQEPG*QGQNVG
Trigger: ACCCACATTCTGGCCTTGGCACCCCGGCTCCTGAAA...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTGACAAGCTCCGGGTaGCTTGGGTCCACTTCTAAG +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHLTSSG*LGSTSK
Trigger: CTTAGAAGTGGACCCAAGGCACCCGGAGCTTGTCAG...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGCCAGACCTCCGGATATaGAGGAACCGGGGCCTCCCA +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQPDLRI*RNRGLP
Trigger: TGGGAGGCCCCGGTTCCTGCATATCCGGAGGTCTGG...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGCTGGGCTCTGGAAAGTaGCATCCACCTCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMLGSGK*HPPPLW
Trigger: CCAGAGGGGAGGTGGATGGCACTTTCCAGAGCCCAG...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAGCGACCCAGGAACTGTaGAGCAAAGACCTCCAGACC +
Preference number: 4 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRAATQEL*SKDLQT
Trigger: GGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGC...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGCCCATCAGACCATACTaGCAGGCCCTGGGAAGTGCC +
Preference number: 4 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKPIRPY*QALGSA
Trigger: GGCACTTCCCAGGGCCTGGCAGTATGGTCTGATGGG...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGATGCAGCAGAGGATGCTaGCTATTGGACCATACTGCC +
Preference number: 4 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGCSRGC*LLDHTA
Trigger: GGCAGTATGGTCCAATAGGCAGCATCCTCTGCTGCA...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCCTCAGCTCTCCCAGCTaGAGCAGAGGATGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFLSSPS*SRGCCL
Trigger: TAGGCAGCATCCTCTGCTGCAGCTGGGAGAGCTGAG...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCCAAGGTCCCACTaGAGGACACAGCCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKCPRSH*RTQPWN
Trigger: GTTCCAGGGCTGTGTCCTGCAGTGGGACCTTGGGCA...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTTTCTCTTGCTCTCCATaGCTGGCGAATGGACATTCA +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSFSCSP*LANGHS
Trigger: TGAATGTCCATTCGCCAGGCATGGAGAGCAAGAGAA...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTAGCTTGTGGCCCCAGCTaGCCCGACAGTGTCACTCTC +
Preference number: 4 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLACGPS*PDSVTL
Trigger: GAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAGC...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGACTGGGCAGAAAGTTGTaGCCGAGGCCGGCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRLGRKL*PRPAPA
Trigger: AGCAGGAGCCGGCCTCGGGCACAACTTTCTGCCCAG...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCCTTATGTTGGTCCCATaGATCAGATGGACGCCTGAG +
Preference number: 4 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSLMLVP*IRWTPE
Trigger: CTCAGGCGTCCATCTGATGCATGGGACCAACATAAG...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCCATTCTGCCTGCAAGTaGTCCTTGACATATGCTGGT +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSHSACK*SLTYAG
Trigger: ACCAGCATATGTCAAGGAGCACTTGCAGGCAGAATG...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GAGCCCCTGGAAGTCCCACTCTCCAAGGATGTACTGCACCGGCATCCTCTGCAATCCTCCCATTCTGCCTaGAAGTGCTCCTTGACATAT +
Preference number: 4 (lower is better)
Translates to: EPLEVPLSKDVLHRHPLQSSHSA*KCSLTY
Trigger: ATATGTCAAGGAGCACTTGCAGGCAGAATGGGAGGA...TTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAGGGGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGCTGGCTGAAGGAGGCTaGACGGGCAGTGGGCACATC +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQLAEGG*TGSGHI
Trigger: GATGTGCCCACTGCCCGTGCAGCCTCCTTCAGCCAG...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTGGGCATCGAGAGTACTaGACAAAGGCTGAAGCCCAG +
Preference number: 4 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPGHREY*TKAEAQ
Trigger: CTGGGCTTCAGCCTTTGTGCAGTACTCTCGATGCCC...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTAAGAAGTGGATTGTTTaGACCGCCTGGGCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: WDLWATSSSTHSTSSSVSKKWIV*TAWAKG
Trigger: TCCCTTTGCCCAGGCGGTGCAAACAATCCACTTCTT...AGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCACTCAACTTGAATGGCTaGCTGGGTCGGGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRALNLNG*LGRAEG
Trigger: GCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAG...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCTCTTCCTCCAGCAATTaGATCACTCTGACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSSSSSN*ITLTSA
Trigger: AGCAGAGGTCAGAGTGATGCAATTGCTGGAGGAAGA...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCATGCCCATTTCCACGTTaGAATTCCAAAGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPCPFPR*NSKATS
Trigger: TGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCA...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCAGTCAGGGGCTGCTGTaGTCATTTCACAGATGCAGT +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPSQGLL*SFHRCS
Trigger: ACTGCATCTGTGAAATGAGCACAGCAGCCCCTGACT...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCGGACTCAGATCTGTCTaGACACCCAGGGCTACAGTT +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPGLRSV*TPRATV
Trigger: AACTGTAGCCCTGGGTGTGCAGACAGATCTGAGTCC...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCAGGAAACCCTTGCTCCTaGTCCAAGGGTCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPGNPCS*SKGPQA
Trigger: GGCTTGTGGACCCTTGGAGCAGGAGCAAGGGTTTCC...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAACTCTACCTCAAGGGTTaGCTTTGGACTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQLYLKG*LWTVSP
Trigger: TGGGGACACAGTCCAAAGGCAACCCTTGAGGTAGAG...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTGGAGAGAGCTCAGTCTaGGTCTGCTGCTTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATGESSV*VCCFLF
Trigger: AAACAGAAAGCAGCAGACGCAGACTGAGCTCTCTCC...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGGTGATCTTGGCTCACTaGAACATCTGCCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILVILAH*NICLSV
Trigger: AACCGAGAGGCAGATGTTGCAGTGAGCCAAGATCAC...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCGCTGGAGTGCAGTGGTaGAATCTCCGCTCACGGCAA +
Preference number: 4 (lower is better)
Translates to: TLLAISPDTPTAISPTQSAGVQW*NLRSRQ
Trigger: TTGCCGTGAGCGGAGATTGCACCACTGCACTCCAGC...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCGTTCCCAGGCGGGTTTaGTGGGAGAATCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPVPRRV*WENHQP
Trigger: AGGCTGGTGATTCTCCCAGCAAACCCGCCTGGGAAC...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTCCACGGGGCCAGCTTTaGCTCGGGCACAGTGCTCCA +
Preference number: 4 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCPRGQL*LGHSAP
Trigger: TGGAGCACTGTGCCCGAGGCAAAGCTGGCCCCGTGG...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCAAGGATCTATTTGCCTaGCTGTATCCTCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: SVHATHIRSTSESGFSGSKDLFA*LYPPPG
Trigger: GCCTGGTGGAGGATACAGGCAGGCAAATAGATCCTT...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGACTGTGATGGGGGCCTaGCTGAATAGTGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMTVMGA*LNSAHS
Trigger: GGAATGGGCACTATTCAGGCAGGCCCCCATCACAGT...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGACTGTGATGGGGGCCTaGCTGAATAGTGCCCATTCC +
Preference number: 4 (lower is better)
Translates to: VAQGSGALESSKWPLLNLTVMGA*LNSAHS
Trigger: GGAATGGGCACTATTCAGGCAGGCCCCCATCACAGT...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACAGAGGGGATGTGAACTaGTTGGACCCCACCAGACTG +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHRGDVN*LDPTRL
Trigger: CAGTCTGGTGGGGTCCAAGCAGTTCACATCCCCTCT...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AACGTGGATGTGCGACCCAGGAACTGTGCAGCAAAGACCTCCAGACCCTCCCCTGTTCTCTCCTATTTCTaGACACTTGCCAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: NVDVRPRNCAAKTSRPSPVLSYF*TLASRG
Trigger: GCCTCTACTGGCAAGTGTGCAGAAATAGGAGAGAAC...AGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTAGAGGTCACAAGCTCTaGTGCCCCAAAATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPRGHKL*CPKMAL
Trigger: CAGAGCCATTTTGGGGCACCAGAGCTTGTGACCTCT...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCTGAGAGTGGCCCCTaGACCCAGCTGGGTGGAGAT +
Preference number: 4 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRAESGP*TQLGGD
Trigger: ATCTCCACCCAGCTGGGTCCAGGGGCCACTCTCAGC...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGACCAGTTCTATGGCACTaGATAACCCAGCCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGPVLWH*ITQPEV
Trigger: CACCTCTGGCTGGGTTATCCAGTGCCATAGAACTGG...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAACCAGTTCTATGGCACTaGATAACCCAGCCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQPVLWH*ITQPEV
Trigger: CACCTCTGGCTGGGTTATCCAGTGCCATAGAACTGG...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCCAGTTCTATGGCACTaGATAACCCAGCCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPPVLWH*ITQPEV
Trigger: CACCTCTGGCTGGGTTATCCAGTGCCATAGAACTGG...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp GCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGAATAAAGACCCCAGTCCAGTaGCTGACCAGTTCTATGGCA +
Preference number: 4 (lower is better)
Translates to: ATSSSTHSTSSSVSGRGIKTPVQ*LTSSMA
Trigger: TGCCATAGAACTGGTCAGCCACTGGACTGGGGTCTT...TATTCCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR CCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCGGCTCTGAAATGTTTTaGCTCCAAGGACATGAGCCA +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSGSEMF*LQGHEP
Trigger: TGGCTCATGTCCTTGGAGCCAAAACATTTCAGAGCC...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCCTTAGGCTGAGCCCCTaGAAGTCCCACTCTCCAAGG +
Preference number: 4 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGLRLSP*KSHSPR
Trigger: CCTTGGAGAGTGGGACTTCCAGGGGCTCAGCCTAAG...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTACAGCATGGGACCTCTaGGCCACCTCTTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTTAWDL*ATSSST
Trigger: GGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGT...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACAACAGCATGGGACCTCTaGGCCACCTCTTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTTAWDL*ATSSST
Trigger: GGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGT...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACAGCAATGACTCGGCTCTaGGGGAGCTGGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTAMTRL*GSWLSR
Trigger: CCTGCTGAGCCAGCTCCCCCAGAGCCGAGTCATTGC...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATGCAATGACTCGGCTCTaGGGGAGCTGGCTCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHAMTRL*GSWLSR
Trigger: CCTGCTGAGCCAGCTCCCCCAGAGCCGAGTCATTGC...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp ATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCGAGGTCATGTCGAGGTaGATGATCCAAATCCTGTCC +
Preference number: 4 (lower is better)
Translates to: IPRYPHSNFTNTEQLPSAEVMSR*MIQILS
Trigger: GGACAGGATTTGGATCATCCACCTCGACATGACCTC...GGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTGGAAACACCCCTCACTaGCTCAAGCCTTCAGTTAAA +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSGNTPH*LKPSVK
Trigger: TTTAACTGAAGGCTTGAGCCAGTGAGGGGTGTTTCC...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTCCAGTCCTCTTGGCTTaGACCTTTTCCTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PIPPQQFHQHRATALSHSPVLLA*TFSSAE
Trigger: CTCTGCTGAGGAAAAGGTCCAAGCCAAGAGGACTGG...AGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGGTCCCATGCATCAGATaGACGCCTGAGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTEVPCIR*TPEGTG
Trigger: CCCAGTGCCCTCAGGCGTCCATCTGATGCATGGGAC...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCATATGCTGGTGGTGGTaGGGAGGCTGTTCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLICWWW*GGCSSL
Trigger: GAGACTCGAACAGCCTCCCCACCACCACCAGCATAT...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCTTGACATATGCTGGTaGTGGTGGGGAGGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLLDICW*WWGGCS
Trigger: CGAACAGCCTCCCCACCACCACCAGCATATGTCAAG...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTCAGATGTGGGCCACATaGGAAGTCCCAGCTCTATTC +
Preference number: 4 (lower is better)
Translates to: PIPPQQFHQHRATALSHSQMWAT*EVPALF
Trigger: GAATAGAGCTGGGACTTCCCATGTGGCCCACATCTG...AGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGAATACAGATGTGGGCCACATaGGAAGTCCCAGCTCTATTC +
Preference number: 4 (lower is better)
Translates to: ATSSSTHSTSSSVSGRGIQMWAT*EVPALF
Trigger: GAATAGAGCTGGGACTTCCCATGTGGCCCACATCTG...TATTCCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGAATGACCGGAATACATaGGCTGCCAGGTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILNDRNT*AARSDV
Trigger: CACATCTGACCTGGCAGCCCATGTATTCCGGTCATT...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCAAGACACTGCCATTTTaGGGGGTCACTGTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: SVHATHIRSTSESGFSGSKTLPF*GVTVQP
Trigger: AGGCTGAACAGTGACCCCCCAAAATGGCAGTGTCTT...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTACACCCAAGGGGTCCTaGGCCAGTCACATAACTCCA +
Preference number: 4 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPTPKGS*ASHITP
Trigger: TGGAGTTATGTGACTGGCCCAGGACCCCTTGGGTGT...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGGTCCTAGTCCCAGCTTaGACAGGGACAGGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTEVLVPA*TGTGLR
Trigger: CCTCAGCCCTGTCCCTGTCCAAGCTGGGACTAGGAC...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AACGTGGATGTGCGACCCAGGAACTGTGCAGCAAAGACCTCCAGACCCTCCCCTTACCAGAGCTTCAGATaGGACTCAGATCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: NVDVRPRNCAAKTSRPSPYQSFR*DSDLSA
Trigger: TGCAGACAGATCTGAGTCCCATCTGAAGCTCTGGTA...AGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACAGAAAGCCAGGTGGGGTaGGGGGTCTTCAGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTESQVG*GVFRWQ
Trigger: TTGCCACCTGAAGACCCCCCACCCCACCTGGCTTTC...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGAACAGCAGAGGGACTTaGACGCCTCTCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTENSRGT*TPLQAG
Trigger: GCCTGCCTGGAGAGGCGTCCAAGTCCCTCTGCTGTT...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTCTAGTTTGCTTTGCTTaGTCACGTAGCTCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSLVCFA*SRSSAS
Trigger: TGAGGCTGAGCTACGTGACCAAGCAAAGCAAACTAG...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AACGTGGATGTGCGACCCAGGAACTGTGCAGCAAAGACCTCCAGACCCTCCCCTTTGGTATCATCTCCCTaGTGCCTGACACAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: NVDVRPRNCAAKTSRPSPLVSSP*CLTQSR
Trigger: CCTACTTTGTGTCAGGCACCAGGGAGATGATACCAA...AGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTTCCCTGGGCCCACTGTaGTCCTGGCCATCTCACATC +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTSLGPL*SWPSHI
Trigger: GATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGA...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGACTCAAGGGTTGCCTTTaGACTGTGTCCCCACATGGT +
Preference number: 4 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGLKGCL*TVSPHG
Trigger: ACCATGTGGGGACACAGTCCAAAGGCAACCCTTGAG...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCGTTCAAACTCCAGCATaGCCAGCTGCTGGCTGTGTG +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLVQTPA*PAAGCV
Trigger: CACACAGCCAGCAGCTGGCCATGCTGGAGTTTGAAC...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCAGAGTCTGGGTTCAGTaGCAGCCACTTTCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGRVWVQ*QPLSLP
Trigger: GGGCAGCGAAAGTGGCTGCCACTGAACCCAGACTCT...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGACTCAACTTTCAGTCTaGAACTGGGCTGGGTGTCTG +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRTQLSV*NWAGCL
Trigger: CAGACACCCAGCCCAGTTCCAGACTGAAAGTTGAGT...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCTGGGTGGGAGTACAATaGCGTGATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPWVGVQ*RDLGSL
Trigger: CAGTGAGCCAAGATCACGCCATTGTACTCCCACCCA...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAACTCTTGTTGCCTGGGTaGGAGTACAATGGCGTGATC +
Preference number: 4 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQLLLPG*EYNGVI
Trigger: GATCACGCCATTGTACTCCCACCCAGGCAACAAGAG...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCTCTTGTTGCCTGGGTaGGAGTACAATGGCGTGATC +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPLLLPG*EYNGVI
Trigger: GATCACGCCATTGTACTCCCACCCAGGCAACAAGAG...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGCCTTTCAGGAGCATGTaGCCCAGATTGATTTGCTGT +
Preference number: 4 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWPFRSM*PRLICC
Trigger: ACAGCAAATCAATCTGGGCCACATGCTCCTGAAAGG...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGAACCACACTGGAGCCTaGTGGGGCTCCCAAGGACCT +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTENHTGA*WGSQGP
Trigger: AGGTCCTTGGGAGCCCCACCAGGCTCCAGTGTGGTT...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGAGCCCATGTCTACTCATaGAGTACTTGGGGCAACCAC +
Preference number: 4 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGAHVYS*STWGNH
Trigger: GTGGTTGCCCCAAGTACTCCATGAGTAGACATGGGC...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACACCTCACGGAGGCTGTTaGCAGGAAAGGACTCGTCCC +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTPHGGC*QERTRP
Trigger: GGGACGAGTCCTTTCCTGCCAACAGCCTCCGTGAGG...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAACCAACTTTGGGAAGGTaGTCTCAGCCCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQPTLGR*SQPSAI
Trigger: GATTGCTGAGGGCTGAGACCACCTTCCCAAAGTTGG...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTAACCATCCAACCTCCTaGGCCTGGCTTACAGTTGGT +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPNHPTS*AWLTVG
Trigger: ACCAACTGTAAGCCAGGCCCAGGAGGTTGGATGGTT...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAAGGGAGGCCCTGCGTaGACACCTATGATTATGGAC +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALKGGPA*TPMIMD
Trigger: GTCCATAATCATAGGTGTCCACGCAGGGCCTCCCTT...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCACACTGGGCAAGTCATaGGCCCTCTCTGAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLTLGKS*ALSELW
Trigger: CCAAAGCTCAGAGAGGGCCCATGACTTGCCCAGTGT...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCGAGGTCAACGGAGTGTaGTTCTCAGGGGGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGEVNGV*FSGGAK
Trigger: CTTGGCACCCCCTGAGAACCACACTCCGTTGACCTC...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCCTCCTCTGCCCTTaGAGGGCGCACAGGACCTTG +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQSLLCP*RAHRTL
Trigger: CAAGGTCCTGTGCGCCCTCCAAGGGCAGAGGAGGCT...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCGCAGAGAACTTGGTCTaGGGCCATGTAGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGAENLV*GHVVEG
Trigger: CCCCTCCACTACATGGCCCCAGACCAAGTTCTCTGC...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGAAGAGCTCTGCAAACTaGCAGAGAACTTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRKSSAN*QRTWSG
Trigger: CCCAGACCAAGTTCTCTGCCAGTTTGCAGAGCTCTT...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCATAACATCTCCCACCTaGGCAGGTTTGCTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSITSPT*AGLLAA
Trigger: AGCTGCAAGCAAACCTGCCCAGGTGGGAGATGTTAT...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp AGTTGCTTTGACAGTCCCAAATCCAGTTCAGGGGGCTaGTCCAGGGCAGAAGGTCATGAGGAGGAGATCAGG +
Preference number: 4 (lower is better)
Translates to: SCFDSPKSSSGG*SRAEGHEEEIR
Trigger: CCTGATCTCCTCCTCATGACCTTCTGCCCTGGACAAGCCCCCTGAACTGGATTTGGGACTGTCAAAGCAACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 72 bp CACTGTTCAGCCTACCAGAGCAGGGGTAGAGTTGCTTaGACAGTCCCAAATCCAGTTCAGGGGGCTTGTCCA +
Preference number: 4 (lower is better)
Translates to: HCSAYQSRGRVA*TVPNPVQGACP
Trigger: TGGACAAGCCCCCTGAACTGGATTTGGGACTGTCAAAGCAACTCTACCCCTGCTCTGGTAGGCTGAACAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 72 bp CAAACTCCAGCATGGCCAGCTGCTGGCTGTGTGACCTaGGGCATGTTAAGCCTCAGTCCCTTCATCCATACA +
Preference number: 4 (lower is better)
Translates to: QTPAWPAAGCVT*GMLSLSPFIHT
Trigger: TGTATGGATGAAGGGACTGAGGCTTAACATGCCCAAGGTCACACAGCCAGCAGCTGGCCATGCTGGAGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp TTCAGGCTGCTCCAGGGGATTAGCTCTCAGGCACTTTaGGTTACTTACCCACCTGGCCTCTGCAGCAGAGAA +
Preference number: 4 (lower is better)
Translates to: FRLLQGISSQAL*VTYPPGLCSRE
Trigger: TTCTCTGCTGCAGAGGCCAGGTGGGTAAGTAACCAAAAGTGCCTGAGAGCTAATCCCCTGGAGCAGCCTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCATACACTGTAGTTGCTaGGAGGTCAAGGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLIHCSC*EVKGWV
Trigger: GACCCAGCCCTTGACCTCTCAGCAACTACAGTGTAT...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGGCTTATCCACAGCAATaGCTCGGCTCTGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTEAYPQQ*LGSGGA
Trigger: AGCTCCCCCAGAGCCGAGTCATTGCTGTGGATAAGC...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTGCTTATCCACAGCAATaGCTCGGCTCTGGGGGAGCT +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTAYPQQ*LGSGGA
Trigger: AGCTCCCCCAGAGCCGAGTCATTGCTGTGGATAAGC...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCTGCCCTCAGCCACTCTaGTGTGATGGAGCCAATCCA +
Preference number: 4 (lower is better)
Translates to: GNHRTLGNAIRTWALESACPQPL*CDGANP
Trigger: TGGATTGGCTCCATCACATCAGAGTGGCTGAGGGCA...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTGCCCTCAGCCACTCTaGTGTGATGGAGCCAATCCA +
Preference number: 4 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGCPQPL*CDGANP
Trigger: TGGATTGGCTCCATCACATCAGAGTGGCTGAGGGCA...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp TGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTATCCAAGGCCAGGAGTaGGGACTCACGTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: WGNHRTLGNAIRTWALESIQGQE*GLTCLP
Trigger: AGGAAGGCACGTGAGTCCTCACTCCTGGCCTTGGAT...ACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGGAGCCAAAACGCAGATaGGCTTCCTGTGCTCGAGCC +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMEPKRR*ASCARA
Trigger: GGCTCGAGCACAGGAAGCTCATCTGCGTTTTGGCTC...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCGACACATGGGTTATTTaGAACCCCAGGGGGTCAACT +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCDTWVI*NPRGST
Trigger: AGTTGACCCCCTGGGGTTTCAAATAACCCATGTGTC...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CTGCTCCATGTCCTGGTGGAAGACGTAGGGAGGGTTGCTGACAATCAGGTCCATTTGGTCACTGTCATGTaGCCTCAGGCAGTACATACC +
Preference number: 4 (lower is better)
Translates to: LLHVLVEDVGRVADNQVHLVTVM*PQAVHT
Trigger: GGTATGTACTGCCTGAGGTCACATGACAGTGACCAA...ATGGACCTGATTGTCAGCAACCCTCCCTACGTCTTCCACCAGGACATGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR TCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCACTTAGGCTGGGTATaGCTCCAGCAATATAGGCTC +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPHLGWV*LQQYRL
Trigger: GAGCCTATATTGCTGGAGTCATACCCAGCCTAAGTG...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCCTGGGAGCTGCAGTGTaGCCTCTACCAAATGTGTCC +
Preference number: 4 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGLGAAV*PLPNVS
Trigger: GGACACATTTGGTAGAGGTCACACTGCAGCTCCCAG...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCCTGGGAGCTGCAGTGTaGCCTCTACCAAATGTGTCC +
Preference number: 4 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFLGAAV*PLPNVS
Trigger: GGACACATTTGGTAGAGGTCACACTGCAGCTCCCAG...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCAGCAGGCAAAGGTCTGTaGGCATGGGGGACTAAGGAA +
Preference number: 4 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPAGKGL*AWGTKE
Trigger: TTCCTTAGTCCCCCATGCTCACAGACCTTTGCCTGC...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCGCAGGCAAAGGTCTGTaGGCATGGGGGACTAAGGAA +
Preference number: 4 (lower is better)
Translates to: TLLAISPDTPTAISPTQSAGKGL*AWGTKE
Trigger: TTCCTTAGTCCCCCATGCTCACAGACCTTTGCCTGC...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCACCCTGAGATGCTGCTaGAGACAGCAAGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: GSSLQLNERGCATQELCSTLRCC*RQQEPK
Trigger: CTTTGGCTCTTGCTGTCTTCAGCAGCATCTCAGGGT...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTGGCAGATTCTGGGATTaGAATCCAGGCTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWAGRFWD*NPGWCG
Trigger: GCCACACCAGCCTGGATTTCAATCCCAGAATCTGCC...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACATCAGATGGACGCCTaGGGGCACTGGGTCCTTCCT +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTHQMDA*GHWVLP
Trigger: AGGAAGGACCCAGTGCCCTCAGGCGTCCATCTGATG...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTATCTCTAGACAACAGTaGGGAGTCAAGAGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATISRQQ*GVKSPR
Trigger: TCTTGGGCTCTTGACTCCTCACTGTTGTCTAGAGAT...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCCCTGCAAGTGCTCCTTaGCATATGCTGGTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPPASAP*HMLVVV
Trigger: CACCACCACCAGCATATGTCAAGGAGCACTTGCAGG...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCATGGAGAAACCCACTaGCAACTGGGAAAAGCATCC +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPHGETH*QLGKAS
Trigger: GGATGCTTTTCCCAGTTGTCAGTGGGTTTCTCCATG...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGACATGGAGAAACCCACTaGCAACTGGGAAAAGCATCC +
Preference number: 4 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGHGETH*QLGKAS
Trigger: GGATGCTTTTCCCAGTTGTCAGTGGGTTTCTCCATG...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCGGGATCAGGTGCACTTaGGTCTTCGAAGTGGCCATT +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLGIRCT*VFEVAI
Trigger: AATGGCCACTTCGAAGACTCAAGTGCACCTGATCCC...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCCAGGGCAGAAGGTCATaGGGAGGAGATCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: GNHRTLGNAIRTWALESAQGRRS*GGDQVT
Trigger: AGTGACCTGATCTCCTCCTCATGACCTTCTGCCCTG...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAAGGGGTAGAGTTGCTTTaGCAGTCCCAAATCCAGTTC +
Preference number: 4 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQGVELL*QSQIQF
Trigger: GAACTGGATTTGGGACTGTCAAAGCAACTCTACCCC...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCTTTCTTCCGTCACTCTaGCACTCCTGCCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALFLPSL*HSCLLY
Trigger: GTAAAGGAGGCAGGAGTGTCAGAGTGACGGAAGAAA...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCTGGAGGTCAGCAATCTaGAATCAGTTTCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: SVHATHIRSTSESGFSGSWRSAI*NQFHRA
Trigger: AGCCCTGTGAAACTGATTTCAGATTGCTGACCTCCA...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCGGAAGCAATAGGAGATaGGAGCATCATACTGGGAGT +
Preference number: 4 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSGSNRR*EHHTGS
Trigger: ACTCCCAGTATGATGCTCTCATCTCCTATTGCTTCC...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCGGACTGCTGTATGTGTaGGAGGTAGTCTTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPGLLYV*EVVFGR
Trigger: TCTTCCAAAGACTACCTCTCACACATACAGCAGTCC...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCCACAGGGATCTCTGTaGGCGCTTCAGGCACCAACA +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTEPQGSL*ALQAPT
Trigger: TGTTGGTGCCTGAAGCGCTCACAGAGATCCCTGTGG...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATACACAAAGTAGGTCTTaGGAGACTGAGGCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDTQSRS*ETEALA
Trigger: GGCCAGGGCCTCAGTCTCTCAAGACCTACTTTGTGT...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCACAGGCCTAGGGACCTaGAATGCTCCCCATGACAAG +
Preference number: 4 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGTGLGT*NAPHDK
Trigger: CTTGTCATGGGGAGCATTTCAGGTCCCTAGGCCTGT...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCCTGGTCTTGAACTCCTaGGCTCGGGTGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTLVLNS*ARVICL
Trigger: CAGGCAGATCACCCGAGCTCAGGAGTTCAAGACCAG...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCTGCTGTGTCCTCGCCTaGCCTTGTATTCTGCCCCAC +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTCCVLA*PCILPH
Trigger: GTGGGGCAGAATACAAGGTCAGGCGAGGACACAGCA...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCCTATGTGCAAGTCCATaGGTTCTGCAAGGCCAGGGC +
Preference number: 4 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFLCASP*VLQGQG
Trigger: GCCCTGGCCTTGCAGAACTCATGGACTTGCACATAG...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCTATGCTGTGTACATGTaGTGTTGCTTGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: SVHATHIRSTSESGFSGSYAVYM*CCLASP
Trigger: TGGGGAAGCCAAGCAACATCACATGTACACAGCATA...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACAAACAGGAGGTGGGAATaGGGGGACAGATGCTGGAGG +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTNRRWE*GDRCWR
Trigger: CCTCCAGCATCTGTCCCCTCATTCCCACCTCCTGTT...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTGTTGGGGGCAGGTGGTaGCTCTGGCAGAGGCTCTGT +
Preference number: 4 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCVGGRW*LWQRLC
Trigger: ACAGAGCCTCTGCCAGAGTCACCACCTGCCCCCAAC...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGAACACCCCAAAGACCTaGGGCTCCTCTACAATTTGT +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRNTPKT*GSSTIC
Trigger: ACAAATTGTAGAGGAGCCTCAGGTCTTTGGGGTGTT...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAAAGTGAACCTTCCATaGGGGGCACAGCCCTGGTGC +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTKVNLP*GAQPWC
Trigger: GCACCAGGGCTGTGCCCCTCATGGAAGGTTCACTTT...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGCCAGCAGATGGTGACTaGATGCATGCCCCATGGCCT +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMPADGD*MHAPWP
Trigger: AGGCCATGGGGCATGCATTCAGTCACCATCTGCTGG...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTTACTCTGTGGGAACTTaGGTGAGAGGGGATGTGAAC +
Preference number: 4 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPYSVGT*VRGDVN
Trigger: GTTCACATCCCCTCTCACTCAAGTTCCCACAGAGTA...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTTGCACCGGCATCCTCTaGAATCGACGGCTACTCAGC +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTCTGIL*NRRLLS
Trigger: GCTGAGTAGCCGTCGATTGCAGAGGATGCCGGTGCA...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGAATATCTCCAAGGATGTACTaGACCGGCATCCTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: ATSSSTHSTSSSVSGRGISPRMY*TGILCN
Trigger: ATTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGA...TATTCCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR GCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGTTTCAGGAGCCGGGGTaGCAAGGCCAGAATGTGGGT +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMFQEPG*QGQNVG
Trigger: ACCCACATTCTGGCCTTGGCACCCCGGCTCCTGAAA...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACTGACAAGCTCCGGGTaGCTTGGGTCCACTTCTAAG +
Preference number: 4 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPLTSSG*LGSTSK
Trigger: CTTAGAAGTGGACCCAAGGCACCCGGAGCTTGTCAG...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGACTGGGCTCTGGAAAGTaGCATCCACCTCCCCTCTGG +
Preference number: 4 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRLGSGK*HPPPLW
Trigger: CCAGAGGGGAGGTGGATGGCACTTTCCAGAGCCCAG...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAAACTGACGGCCAGCCCTaGTGGGGCAGAAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQTDGQP*WGRRKP
Trigger: GGGTTTCCTTCTGCCCCAGCAGGGCTGGCCGTCAGT...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGGCGACCCAGGAACTGTaGAGCAAAGACCTCCAGACC +
Preference number: 4 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKATQEL*SKDLQT
Trigger: GGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGC...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTTGCAGCAGAGGATGCTaGCTATTGGACCATACTGCC +
Preference number: 4 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPCSRGC*LLDHTA
Trigger: GGCAGTATGGTCCAATAGGCAGCATCCTCTGCTGCA...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTACACTCCTGTCTATaGTCTGGGCTCTGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHLHSCL*SGLWLK
Trigger: CTTCAGCCAGAGCCCAGAGCATAGACAGGAGTGTAG...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCGCATGGTACAGAAGGTaGCAGCAGAGGTATGGGCTA +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLAWYRR*QQRYGL
Trigger: TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGC...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ACCAGTTCCTCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGGCATGGTACAGAAGGTaGCAGCAGAGGTATGGGCTA +
Preference number: 4 (lower is better)
Translates to: TSSSVSGRGINTGGTILRAWYRR*QQRYGL
Trigger: TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGC...CCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGAGGAACTGGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACACATGGAGGCCAGCCTTaGACTTTCTCCCCACATCCC +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTHGGQP*TFSPHP
Trigger: GGGATGTGGGGAGAAAGTGCAAGGCTGGCCTCCATG...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCTGCTCATTTCACAGATaGAGTACCTGCAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: SVHATHIRSTSESGFSGSCSFHR*STCNPE
Trigger: CTCTGGGTTGCAGGTACTGCATCTGTGAAATGAGCA...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACACAGGCACCAACAATCTaGTCCCTGGGCTCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTQAPTI*SLGSVG
Trigger: CCCTACTGAGCCCAGGGAGCAGATTGTTGGTGCCTG...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGCAGGCACCAACAATCTaGTCCCTGGGCTCAGTAGGG +
Preference number: 4 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKQAPTI*SLGSVG
Trigger: CCCTACTGAGCCCAGGGAGCAGATTGTTGGTGCCTG...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCAAGAGACCTGGCTCGTaGCCCAGCCCTGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFKRPGS*PSPAPV
Trigger: GACAGGAGCAGGGCTGGGGCACGAGCCAGGTCTCTT...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCAACCTGACCTGCAACTaGACCCTGCTGAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPNLTCN*TLLSLG
Trigger: ACCAAGGCTCAGCAGGGTGCAGTTGCAGGTCAGGTT...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCACTATGCAACCTGACCTaGAACTGCACCCTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRALCNLT*NCTLLS
Trigger: GCTCAGCAGGGTGCAGTTGCAGGTCAGGTTGCATAG...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCGGAAACCCTTGCTCCTaGTCCAAGGGTCCACAAGCC +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTGNPCS*SKGPQA
Trigger: GGCTTGTGGACCCTTGGAGCAGGAGCAAGGGTTTCC...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGAGCCCTGGAAACCCTTaGTCCTGCTCCAAGGGTCCA +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTESPGNP*SCSKGP
Trigger: TGGACCCTTGGAGCAGGAGCAAGGGTTTCCAGGGCT...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGGCACCCAGGAGCAGCTaGAGGTCTTCTAGAAAGCCC +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTEAPRSS*RSSRKP
Trigger: GGGCTTTCTAGAAGACCTGCAGCTGCTCCTGGGTGC...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCCCTGGTCCCCAGAAATaGATTCAGAGCTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: GSSLQLNERGCATQELCSPGPQK*IQSSAK
Trigger: CTTGGCTGAGCTCTGAATGCATTTCTGGGGACCAGG...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGATTTACACACTGCAGATaGCCGGTACTGTTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGFTHCR*PVLLSP
Trigger: TGGCGACAACAGTACCGGGCATCTGCAGTGTGTAAA...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCATCTGCCTGGCCCCTTTaGTGTGGGCGTGAAAATCTG +
Preference number: 4 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPSAWPL*CGRENL
Trigger: CAGATTTTCACGCCCACAGCAAAGGGGCCAGGCAGA...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCAAGAATCCTTCCTATGTaGTCAGAGAACAGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPRILPM*SENRVC
Trigger: ACAAACCCTGTTCTCTGAGCACATAGGAAGGATTCT...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCATGTCCAGGCTGGAGTaGAGTGGCGCTATTATAGCT +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCMSRLE*SGAIIA
Trigger: AGCTATAATAGCGCCACTGCACTCCAGCCTGGACAT...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTAAGTGTGAGCCACCCTaGACGGCCCCTTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCKCEPP*TAPFFL
Trigger: CAGAAAGAAAGGGGCCGTGCAGGGTGGCTCACACTT...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACACACACGTGCATGCATaGAACCCTGGCTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHTHVHA*NPGLVS
Trigger: GGAAACCAAGCCAGGGTTGCATGCATGCACGTGTGT...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCTCGTCCAGGCTGGAGTaGAGTGGTGCAATCTCCGCT +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTSSRLE*SGAISA
Trigger: AGCGGAGATTGCACCACTGCACTCCAGCCTGGACGA...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTTTCCCTCCCAGACCTaGCTCACCTTGCTGTGTGAC +
Preference number: 4 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPFPSQT*LTLLCD
Trigger: GTCACACAGCAAGGTGAGGCAGGTCTGGGAGGGAAA...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTGGAAGGGAAGAGCTCTaGAAACTGGCAGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPGREEL*KLAENL
Trigger: CAAGTTCTCTGCCAGTTTGCAGAGCTCTTCCCTTCC...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGGGAGATCGCGCCACTaGACTCCAGTCTGGGCAACA +
Preference number: 4 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRGRSRH*TPVWAT
Trigger: TGTTGCCCAGACTGGAGTGCAGTGGCGCGATCTCCC...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCAGAGGGGATGTGAACTaGTTGGACCCCACCAGACTG +
Preference number: 4 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGRGDVN*LDPTRL
Trigger: CAGTCTGGTGGGGTCCAAGCAGTTCACATCCCCTCT...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCCCCTAAATTCAGCATaGAGTTTCTCCACCGTAGTG +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATPLNSA*SFSTVV
Trigger: CACTACGGTGGAGAAACTGCATGCTGAATTTAGGGG...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTGGAAGTCCCACTCTCCAAGGATGTACTGCACCGGCATCCTCTGCAATCGACGGTCCTCAGATATAGTTaGTTGCCACCCTGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: LEVPLSKDVLHRHPLQSTVLRYS*LPPCLK
Trigger: TTTCAGGCAGGGTGGCAACCAACTATATCTGAGGAC...CGTCGATTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp CTGGAAGTCCCACTCTCCAAGGATGTACTGCACCGGCATCCTCTGCAATCGACGGCCCCAAAATGGCTCTaGTCCTCAGATATAGTTGGT +
Preference number: 4 (lower is better)
Translates to: LEVPLSKDVLHRHPLQSTAPKWL*SSDIVG
Trigger: ACCAACTATATCTGAGGACCAGAGCCATTTTGGGGC...CGTCGATTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGTCTGGTGCCCCAAAATaGCTCTGGTCCTCAGATATA +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRSGAPK*LWSSDI
Trigger: TATATCTGAGGACCAGAGCCATTTTGGGGCACCAGA...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCAGAGGTCACAAGCTCTaGTGCCCCAAAATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: GSSLQLNERGCATQELCSRGHKL*CPKMAL
Trigger: CAGAGCCATTTTGGGGCACCAGAGCTTGTGACCTCT...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGCTGGACCCAGCTGGGTaGAGATGGAGAGGTCACAAG +
Preference number: 4 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKLDPAG*RWRGHK
Trigger: CTTGTGACCTCTCCATCTCCACCCAGCTGGGTCCAG...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCAGTTCTATGGCACTaGATAACCCAGCCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLPVLWH*ITQPEV
Trigger: CACCTCTGGCTGGGTTATCCAGTGCCATAGAACTGG...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp ATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCGGCTCTGAAATGTTTTaGCTCCAAGGACATGAGCCA +
Preference number: 4 (lower is better)
Translates to: IPRYPHSNFTNTEQLPSAGSEMF*LQGHEP
Trigger: TGGCTCATGTCCTTGGAGCCAAAACATTTCAGAGCC...GGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000455834.5
CDS-3UTR CCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTAAATGAGGGGGCTGCCTaGGGATCCCACAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLNEGAA*GSHSMG
Trigger: TCCCATGCTGTGGGATCCCCAGGCAGCCCCCTCATT...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAATGAGGGGGCTGCCTaGGGATCCCACAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQNEGAA*GSHSMG
Trigger: TCCCATGCTGTGGGATCCCCAGGCAGCCCCCTCATT...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp TCCTCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCTGAGCGAGGTCATGTCGAGGTaGATGATCCAAATCCTGTCC +
Preference number: 4 (lower is better)
Translates to: SSVSGRGINTGGTILRLSEVMSR*MIQILS
Trigger: GGACAGGATTTGGATCATCCACCTCGACATGACCTC...GCTCAGCCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTAATGCCATAAGAACCTaGGCTCTGGAAAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATNAIRT*ALESAI
Trigger: GATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATT...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp ATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCAATGCCATAAGAACCTaGGCTCTGGAAAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: IPRYPHSNFTNTEQLPSANAIRT*ALESAI
Trigger: GATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATT...GGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp CTGGAAGTCCCACTCTCCAAGGATGTACTGCACCGGCATCCTCTGCAATCGACGCTCTCAATACTTTACTaGCCATATCCCCCGATACCC +
Preference number: 4 (lower is better)
Translates to: LEVPLSKDVLHRHPLQSTLSILY*PYPPIP
Trigger: GGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAG...CGTCGATTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCCTATGCCAGGACCCATaGTATCCAAGGCCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: GNHRTLGNAIRTWALESALCQDP*YPRPGV
Trigger: CACTCCTGGCCTTGGATACCATGGGTCCTGGCATAG...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp TGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTTGCTCGAGCCAGGCTTaGCCAGGGAATTGTGTACGC +
Preference number: 4 (lower is better)
Translates to: WGNHRTLGNAIRTWALESCSSQA*PGNCVR
Trigger: GCGTACACAATTCCCTGGCCAAGCCTGGCTCGAGCA...ACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGAATGGAATGAGACAGCCTaGTTTGCCATGTTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: GPPLPAPTQPVPLFLAEEWNETA*FAMFLR
Trigger: CCTAAGAAACATGGCAAACCAGGCTGTCTCATTCCA...TTCCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCAGTTGGCGTTGGCCCTaGACTCAGAAGAGCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GNHRTLGNAIRTWALESASWRWP*TQKSQL
Trigger: AAGCTGGCTCTTCTGAGTCCAGGGCCAACGCCAACT...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTGTTGCCAGTTGGCGTTaGCCCTGGACTCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTVASWR*PWTQKS
Trigger: GCTCTTCTGAGTCCAGGGCCAACGCCAACTGGCAAC...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCCTTGCTCTCCATGCCTaGCGAATGGACATTCAGATG +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALLALHA*RMDIQM
Trigger: CATCTGAATGTCCATTCGCCAGGCATGGAGAGCAAG...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTAAGGACACTGGGGCACTaGGAGCTGCAGTGTGACCTC +
Preference number: 4 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLRTLGH*ELQCDL
Trigger: GAGGTCACACTGCAGCTCCCAGTGCCCCAGTGTCCT...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCCTGCCTGCCTTATGTTaGTCCCATGCATCAGATGGA +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCLPALC*SHASDG
Trigger: TCCATCTGATGCATGGGACCAACATAAGGCAGGCAG...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCTGCCTGCCTTATGTTaGTCCCATGCATCAGATGGA +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPLPALC*SHASDG
Trigger: TCCATCTGATGCATGGGACCAACATAAGGCAGGCAG...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCGACATATGCTGGTGGTaGTGGGGAGGCTGTTCGAGT +
Preference number: 4 (lower is better)
Translates to: TLLAISPDTPTAISPTQSDICWW*WGGCSS
Trigger: ACTCGAACAGCCTCCCCACCACCACCAGCATATGTC...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTTGACATATGCTGGTaGTGGTGGGGAGGCTGTTCG +
Preference number: 4 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWALDICW*WWGGCS
Trigger: CGAACAGCCTCCCCACCACCACCAGCATATGTCAAG...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCAGCCAGCTAAGTGTTTaGGGCAAGGATTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLSQLSV*GKDWEQ
Trigger: CTGCTCCCAATCCTTGCCCCAAACACTTAGCTGGCT...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGATGGAGCTTGAAGAAGTaGATTGTTTGCACCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGWSLKK*IVCTAW
Trigger: CCAGGCGGTGCAAACAATCCACTTCTTCAAGCTCCA...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CTGCTCCATGTCCTGGTGGAAGACGTAGGGAGGGTTGCTGACAATCAGGTCCATAAGACACTGCCATTTTaGGGGGTCACTGTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LLHVLVEDVGRVADNQVHKTLPF*GVTVQP
Trigger: AGGCTGAACAGTGACCCCCCAAAATGGCAGTGTCTT...ATGGACCTGATTGTCAGCAACCCTCCCTACGTCTTCCACCAGGACATGGAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp TGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTTCACCCACTCCCTTCTaGGACCCATGCTGGTCAGTC +
Preference number: 4 (lower is better)
Translates to: WGNHRTLGNAIRTWALESSPTPF*DPCWSV
Trigger: GACTGACCAGCATGGGTCCCAGAAGGGAGTGGGTGA...ACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGCTCTGCTCAGGCCTATaGCTTACATGGAGGGGCCAG +
Preference number: 4 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKLCSGL*LTWRGQ
Trigger: CTGGCCCCTCCATGTAAGCCATAGGCCTGAGCAGAG...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCATGAGGCCCATGTCTaGCCTCCCAGTAGCTCTCCA +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTEHEAHV*PPSSSP
Trigger: TGGAGAGCTACTGGGAGGCCAGACATGGGCCTCATG...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGATAAACAGGCCCTCCTaGCTTCATCCAAAGCGTATC +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRINRPS*LHPKRI
Trigger: GATACGCTTTGGATGAAGCCAGGAGGGCCTGTTTAT...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGATGAGAGCATCATACTaGGAGTCAGGAGTCAAGTGC +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRMRASY*ESGVKC
Trigger: GCACTTGACTCCTGACTCCCAGTATGATGCTCTCAT...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGCCAGCCCCTTTTTCCTaGCAGCCAGAAAGAGCAGCC +
Preference number: 4 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKPAPFS*QPERAA
Trigger: GGCTGCTCTTTCTGGCTGCCAGGAAAAAGGGGCTGG...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGAGCATGGCCAGCTGCTaGCTGTGTGACCTTGGGCAT +
Preference number: 4 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKSMASC*LCDLGH
Trigger: ATGCCCAAGGTCACACAGCCAGCAGCTGGCCATGCT...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTAGAGTCTGGGTTCAGTaGCAGCCACTTTCGCTGCCC +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTRVWVQ*QPLSLP
Trigger: GGGCAGCGAAAGTGGCTGCCACTGAACCCAGACTCT...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCGAGTACATCAGAGTCTaGGTTCAGTGGCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCEYIRV*VQWQPL
Trigger: AAGTGGCTGCCACTGAACCCAGACTCTGATGTACTC...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCTCAGTTATTGAGCTGTaGAGTGCCTTCAACAAGGGT +
Preference number: 4 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGSVIEL*SAFNKG
Trigger: ACCCTTGTTGAAGGCACTCCACAGCTCAATAACTGA...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGGAGAGTAGTGAGCAATaGTCAGTTATTGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWESSEQ*SVIELW
Trigger: CCACAGCTCAATAACTGACCATTGCTCACTACTCTC...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCCTCCGGGAAGGGAATaGTCACGTGGGGCATCAAGT +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTEPPGRE*SRGASS
Trigger: ACTTGATGCCCCACGTGACCATTCCCTTCCCGGAGG...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCTTGGTTAGTGAAAGCTaGGAGGAGCCTGTGGTTAGT +
Preference number: 4 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSLVSES*EEPVVS
Trigger: ACTAACCACAGGCTCCTCCCAGCTTTCACTAACCAA...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGGCAGAGAACTTGGTCTaGGGCCATGTAGTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMAENLV*GHVVEG
Trigger: CCCCTCCACTACATGGCCCCAGACCAAGTTCTCTGC...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCGGCTGTCCCAGAGTGTaGAGTGGCTGTGTTCTTTCC +
Preference number: 4 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFGCPRV*SGCVLS
Trigger: GGAAAGAACACAGCCACTCCACACTCTGGGACAGCC...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCGGTTACTTACCCACCTaGCCTCTGCAGCAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCGYLPT*PLQQRK
Trigger: TTTTCTCTGCTGCAGAGGCCAGGTGGGTAAGTAACC...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAAATAACATCTCCCACCTaGGCAGGTTTGCTTGCAGCT +
Preference number: 4 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQITSPT*AGLLAA
Trigger: AGCTGCAAGCAAACCTGCCCAGGTGGGAGATGTTAT...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACTTTGCAGGAGAGGTCTaGAGGAAAGAGAGTCACCCC +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHFAGEV*RKESHP
Trigger: GGGGTGACTCTCTTTCCTCCAGACCTCTCCTGCAAA...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGCCTCAGGCTCTGAAATaGATTCCCGGGCCTCAGGGA +
Preference number: 4 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKPQALK*IPGPQG
Trigger: TCCCTGAGGCCCGGGAATCCATTTCAGAGCCTGAGG...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACGTCCTCAGATATAGTTaGTTGCCACCCAGCCGGAGA +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHVLRYS*LPPSRR
Trigger: TCTCCGGCTGGGTGGCAACCAACTATATCTGAGGAC...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455834.5
3UTR CAA 72 bp GGCGCAGGATGCACCATATTCTATAGGACCCTCCACTaGGTATCATCTCCCTGGTGCCTGACACAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: GAGCTIFYRTLH*VSSPWCLTQSR
Trigger: CCTACTTTGTGTCAGGCACCAGGGAGATGATACCAAGTGGAGGGTCCTATAGAATATGGTGCATCCTGCGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp GAATGCATGCCCCATGGCCTAAGGATAAGGATCTATTaGCCTGCCTGTATCCTCCACCAGGCCATGAACTCC +
Preference number: 4 (lower is better)
Translates to: ECMPHGLRIRIY*PACILHQAMNS
Trigger: GGAGTTCATGGCCTGGTGGAGGATACAGGCAGGCAAATAGATCCTTATCCTTAGGCCATGGGGCATGCATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCTTGGCTCCAAGGACATaGGCCACGATGTACTCACTG +
Preference number: 4 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGLAPRT*ATMYSL
Trigger: CAGTGAGTACATCGTGGCTCATGTCCTTGGAGCCAA...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCTTGGCTCCAAGGACATaGGCCACGATGTACTCACTG +
Preference number: 4 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFLAPRT*ATMYSL
Trigger: CAGTGAGTACATCGTGGCTCATGTCCTTGGAGCCAA...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCATTGGCTCCAAGGACATaGGCCACGATGTACTCACTG +
Preference number: 4 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPLAPRT*ATMYSL
Trigger: CAGTGAGTACATCGTGGCTCATGTCCTTGGAGCCAA...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000455834.5
CDS-3UTR TCA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTTGCAACCGAAGCCTCTaGGCATTCTCATGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWACNRSL*AFSWVR
Trigger: TCTGACCCATGAGAATGCTCAGAGGCTTCGGTTGCA...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCATGCAACCGAAGCCTCTaGGCATTCTCATGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRACNRSL*AFSWVR
Trigger: TCTGACCCATGAGAATGCTCAGAGGCTTCGGTTGCA...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTTCATGTCGAGGTGGATaGTCCAAATCCTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPSCRGG*SKSCPA
Trigger: TGCAGGACAGGATTTGGATCATCCACCTCGACATGA...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCATGTCCAGCTCCTTTCTaGGGTCATGTCGAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPCPAPF*GHVEVD
Trigger: ATCCACCTCGACATGACCTCAGAAAGGAGCTGGACA...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTCAGCCACTCTGATGTaGTGGAGCCAATCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPSATLM*WSQSRC
Trigger: ACACCTGGATTGGCTCCATCACATCAGAGTGGCTGA...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATTCAGCCACTCTGATGTaGTGGAGCCAATCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDSATLM*WSQSRC
Trigger: ACACCTGGATTGGCTCCATCACATCAGAGTGGCTGA...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGAAAGCCTTCAGTTAAATaGACGTGGATGTGCGACCCA +
Preference number: 4 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGKPSVK*TWMCDP
Trigger: TGGGTCGCACATCCACGTTCATTTAACTGAAGGCTT...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCGACACATGGGTTATTTaGAACCCCAGGGGGTCAACT +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLDTWVI*NPRGST
Trigger: AGTTGACCCCCTGGGGTTTCAAATAACCCATGTGTC...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCGGCAGTCTAGTGGAATaGGACAGCCTGGTTTGCCAT +
Preference number: 4 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGGSLVE*DSLVCH
Trigger: ATGGCAAACCAGGCTGTCTCATTCCACTAGACTGCC...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTCATGCACATTCCACTTaGCTAAGAGTAAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSHAHST*LRVKRL
Trigger: CAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATG...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTGCAGGCAAAGGTCTGTaGGCATGGGGGACTAAGGAA +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTAGKGL*AWGTKE
Trigger: TTCCTTAGTCCCCCATGCTCACAGACCTTTGCCTGC...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACAGAAGCCAAGGCTGAGTaGGGTGAAGTCATCTGCCCA +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTEAKAE*GEVICP
Trigger: TGGGCAGATGACTTCACCTCACTCAGCCTTGGCTTC...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCATCTCTAGACAACAGTaGGGAGTCAAGAGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPISRQQ*GVKSPR
Trigger: TCTTGGGCTCTTGACTCCTCACTGTTGTCTAGAGAT...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAAAAAAGCATCCAACTGTaGGACAAGGCCTCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQKSIQL*DKASVS
Trigger: GGAAACTGAGGCCTTGTCTCACAGTTGGATGCTTTT...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTCTGATAGACATTTACTaGACTTGGGTATGCCAGATC +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSLIDIY*TWVCQI
Trigger: GATCTGGCATACCCAAGTTCAGTAAATGTCTATCAG...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAAGGCCATTGCTCAACTTaGATGGCTGCCTGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQGHCST*MAAWVG
Trigger: CCCGACCCAGGCAGCCATTCAAGTTGAGCAATGGCC...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCGGCCATTGCTCAACTTaGATGGCTGCCTGGGTCGGG +
Preference number: 4 (lower is better)
Translates to: DIQMPACTFHLTKSKEVAGHCST*MAAWVG
Trigger: CCCGACCCAGGCAGCCATTCAAGTTGAGCAATGGCC...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGCAGGGCAGAAGGTCATaGGGAGGAGATCAGGTCACT +
Preference number: 4 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKQGRRS*GGDQVT
Trigger: AGTGACCTGATCTCCTCCTCATGACCTTCTGCCCTG...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCTTTAGGTCTGAAGGTTaGGGAAGAGTTCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFFRSEG*GRVPLA
Trigger: GGCCAGGGGAACTCTTCCTCAACCTTCAGACCTAAA...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCATAGGAACAGAATGGTaGCACAGCTCTGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGIGTEW*HSSAQA
Trigger: GGCCTGAGCAGAGCTGTGTCACCATTCTGTTCCTAT...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGGAAGCAATAGGAGATaGGAGCATCATACTGGGAGT +
Preference number: 4 (lower is better)
Translates to: PIPPQQFHQHRATALSHSGSNRR*EHHTGS
Trigger: ACTCCCAGTATGATGCTCTCATCTCCTATTGCTTCC...AGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCAAAATTAGCCTTTCCTaGCCATTTTCCTGCAGGACT +
Preference number: 4 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGKISLS*PFSCRT
Trigger: AGTCCTGCAGGAAAATGGTCAGGAAAGGCTAATTTT...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGGCCTTTCCCACTTTGTaGGCTGTAAAATTAGCCTTT +
Preference number: 4 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWAFPTL*AVKLAF
Trigger: AAAGGCTAATTTTACAGCTCACAAAGTGGGAAAGGC...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACAGGGATCTCTGTaGGCGCTTCAGGCACCAACA +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHPQGSL*ALQAPT
Trigger: TGTTGGTGCCTGAAGCGCTCACAGAGATCCCTGTGG...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAGCTCAGCCTCACACTaGCTTCCAGGAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTSSASH*LPGTAE
Trigger: CTCTGCTGTTCCTGGAAGTCAGTGTGAGGCTGAGCT...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCCATCTCCCTGGTGCCTaGCACAAAGTAGGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: GNHRTLGNAIRTWALESAHLPGA*HKVGLE
Trigger: CTCAAGACCTACTTTGTGTCAGGCACCAGGGAGATG...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGCTGTTCCAGAATATCTaGTGCCACTGCTACAGACCC +
Preference number: 4 (lower is better)
Translates to: VAQGSGALESSKWPLLNLLFQNI*CHCYRP
Trigger: GGGTCTGTAGCAGTGGCATCAGATATTCTGGAACAG...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAACCTCAGCAATGGTTGTaGGTCAGTTCTGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQPQQWL*VSSVPE
Trigger: TTCTGGAACAGAACTGACTCACAACCATTGCTGAGG...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGCAAGGAAGGGATCCCTaGTGTGCCAACAGATGGATT +
Preference number: 4 (lower is better)
Translates to: VAQGSGALESSKWPLLNLQGRDP*CANRWI
Trigger: AATCCATCTGTTGGCACATCAGGGATCCCTTCCTTG...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTATGCTCACGCCTCTCCTaGCTGGGATGTCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLCSRLS*LGCQRT
Trigger: AGTCCTCTGACATCCCAGTCAGGAGAGGCGTGAGCA...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCGGCCCTAAGGGAGGCTaGGGTACTGAGCTCTTGGCT +
Preference number: 4 (lower is better)
Translates to: DIQMPACTFHLTKSKEVAGPKGG*GTELLA
Trigger: AGCCAAGAGCTCAGTACCTCAGCCTCCCTTAGGGCC...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATATGGTCTCGATCTCCTaGCCTCGTGATCCACCCGAC +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHMVSIS*PRDPPD
Trigger: GTCGGGTGGATCACGAGGTCAGGAGATCGAGACCAT...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACCTCACCTTGCTGTGTaGCACTGGGCAAGTCATGGG +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTPHLAV*HWASHG
Trigger: CCCATGACTTGCCCAGTGTCACACAGCAAGGTGAGG...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCGCCAAGCTCCAAGCATaGAGCCAAAAAGGTCAGGGA +
Preference number: 4 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGAKLQA*SQKGQG
Trigger: TCCCTGACCTTTTTGGCTTCATGCTTGGAGCTTGGC...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGAATAGCAAGTGCACTTaGCAGGGAGGGACCAGAGGC +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMNSKCT*QGGTRG
Trigger: GCCTCTGGTCCCTCCCTGTCAAGTGCACTTGCTATT...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGAATGAGGTCAAGAGATTaGGACCATCCTGGCCAACAT +
Preference number: 4 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGMRSRD*DHPGQH
Trigger: ATGTTGGCCAGGATGGTCTCAATCTCTTGACCTCAT...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCTGCAGAAACCACTCTaGGACAAGCATCCAAATGCA +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPLQKPL*DKHPNA
Trigger: TGCATTTGGATGCTTGTCTCAGAGTGGTTTCTGCAG...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATATCTCAGGGGCCAGCTaGTCCATGTCCTGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHISGAS*SMSWWK
Trigger: CTTCCACCAGGACATGGAGCAGCTGGCCCCTGAGAT...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTAGCTGCAGCAGAGGATaGTGCCTATTGGACCATACT +
Preference number: 4 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPSCSRG*CLLDHT
Trigger: AGTATGGTCCAATAGGCAGCATCCTCTGCTGCAGCT...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCTCAGCTCTCCCAGCTaGAGCAGAGGATGCTGCCTA +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHLSSPS*SRGCCL
Trigger: TAGGCAGCATCCTCTGCTGCAGCTGGGAGAGCTGAG...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGGAATGGACATTCAGATaGCAGCATGCACATTCCACT +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGREWTFR*QHAHST
Trigger: AGTGGAATGTGCATGCTGGCATCTGAATGTCCATTC...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCGAATGGACATTCAGATaGCAGCATGCACATTCCACT +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPEWTFR*QHAHST
Trigger: AGTGGAATGTGCATGCTGGCATCTGAATGTCCATTC...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAAGTACATACCTTCTCTTaGTCTCCATGCCTGGCGAAT +
Preference number: 4 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQVHTFS*SPCLAN
Trigger: ATTCGCCAGGCATGGAGAGCAAGAGAAGGTATGTAC...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGAAAAAATGCCACAATGTaGCAAGCCAGGCACATCCCA +
Preference number: 4 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGKNATM*QARHIP
Trigger: TGGGATGTGCCTGGCTTGGCACATTGTGGCATTTTT...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCCTACACTCCTGTCTATaGTCTGGGCTCTGGCTGAAG +
Preference number: 4 (lower is better)
Translates to: GNHRTLGNAIRTWALESALHSCL*SGLWLK
Trigger: CTTCAGCCAGAGCCCAGAGCATAGACAGGAGTGTAG...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGCCGGAATACATGGGCTaGCAGGTCAGATGTGGGCCA +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQPEYMG*QVRCGP
Trigger: TGGCCCACATCTGACCTGGCAGCCCATGTATTCCGG...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCAGGAAACCTGGCGCCTaGTCCTACTGCCGCCAAGGA +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFRKPGA*SYCRQG
Trigger: TCCTTGGCGGCAGTAGGAGCAGGCGCCAGGTTTCCT...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp TCCTCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCTGAGCTCTTCCTCCAGCAATTaGATCACTCTGACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SSVSGRGINTGGTILRLSSSSSN*ITLTSA
Trigger: AGCAGAGGTCAGAGTGATGCAATTGCTGGAGGAAGA...GCTCAGCCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGAGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR GCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGCATGGAGGCCAGCCTTaGACTTTCTCCCCACATCCC +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQHGGQP*TFSPHP
Trigger: GGGATGTGGGGAGAAAGTGCAAGGCTGGCCTCCATG...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCTGCTCATTTCACAGATaGAGTACCTGCAACCCAGAG +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPCSFHR*STCNPE
Trigger: CTCTGGGTTGCAGGTACTGCATCTGTGAAATGAGCA...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGACTCAAAGTCAGGGGCTaGTGTGCTCATTTCACAGAT +
Preference number: 4 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGLKVRG*CAHFTD
Trigger: ATCTGTGAAATGAGCACAGCAGCCCCTGACTTTGAG...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCACCCTACCCGCATGTCTaGAGAACTCCAGGCTTTTGT +
Preference number: 4 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRAPYPHV*RTPGFC
Trigger: ACAAAAGCCTGGAGTTCTGCAGACATGCGGGTAGGG...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATCTCCAGACGCCCCAATaGTGCTTCTCGGATATTCTG +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDLQTPQ*CFSDIL
Trigger: CAGAATATCCGAGAAGCAGCATTGGGGCGTCTGGAG...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTCCAGACGCCCCAATaGTGCTTCTCGGATATTCTG +
Preference number: 4 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWALQTPQ*CFSDIL
Trigger: CAGAATATCCGAGAAGCAGCATTGGGGCGTCTGGAG...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTTTTACACACTGCAGATaGCCGGTACTGTTGTCGCCA +
Preference number: 4 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPFTHCR*PVLLSP
Trigger: TGGCGACAACAGTACCGGGCATCTGCAGTGTGTAAA...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCACAAACGTGAGCTACTaGGCCTGGCCTATTATTATT +
Preference number: 4 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGTNVSY*AWPIII
Trigger: AATAATAATAGGCCAGGCGCAGTAGCTCACGTTTGT...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCCTGGCTTACAGTTGGTaGCTAATAAATGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSLAYSW*LINDCA
Trigger: TGCACAGTCATTTATTAGGCACCAACTGTAAGCCAG...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCACACACACACGTGCATaGATGCAACCCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFTHTRA*MQPWLG
Trigger: ACCAAGCCAGGGTTGCATGCATGCACGTGTGTGTGT...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATCCTAAACTAGCCCTCTaGACTAGGGGATGGACGCAA +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDPKLAL*TRGWTQ
Trigger: TTGCGTCCATCCCCTAGTGCAGAGGGCTAGTTTAGG...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCATCACTCTGTAGGAACTaGGGTTCAGGGAAGTGGTGC +
Preference number: 4 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPSLCRN*GSGKWC
Trigger: GCACCACTTCCCTGAACCGCAGTTCCTACAGAGTGA...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGTTTGCGTGGCTCCCCTaGGTTGTTTGCAGGAGAGGT +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMFAWLP*VVCRRG
Trigger: ACCTCTCCTGCAAACAACGCAGGGGAGCCACGCAAA...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAAGAGGTCACAAGCTCTaGTGCCCCAAAATGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRARGHKL*CPKMAL
Trigger: CAGAGCCATTTTGGGGCACCAGAGCTTGTGACCTCT...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAAGACCCCAGTCCAGTaGCTGACCAGTTCTATGGCA +
Preference number: 4 (lower is better)
Translates to: TLLAISPDTPTAISPTQSKTPVQ*LTSSMA
Trigger: TGCCATAGAACTGGTCAGCCACTGGACTGGGGTCTT...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp CCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGGCTCTGAAATGTTTTaGCTCCAAGGACATGAGCCA +
Preference number: 4 (lower is better)
Translates to: PIPPQQFHQHRATALSHSGSEMF*LQGHEP
Trigger: TGGCTCATGTCCTTGGAGCCAAAACATTTCAGAGCC...AGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000455834.5
CDS-3UTR CCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCAGTTCCTCTGTTTCTaGCCGAGGAATAAACACTGG +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPQFLCF*PRNKHW
Trigger: CCAGTGTTTATTCCTCGGCCAGAAACAGAGGAACTG...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAAACAGCATGGGACCTCTaGGCCACCTCTTCCAGCACC +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQTAWDL*ATSSST
Trigger: GGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGT...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACAAGGGCAGCCATGCTATaGCCCAGACCTCCGGATATG +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTRAAML*PRPPDM
Trigger: CATATCCGGAGGTCTGGGCCATAGCATGGCTGCCCT...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGGTTGCCAGTTGGCGTTaGCCCTGGACTCAGAAGAGC +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQVASWR*PWTQKS
Trigger: GCTCTTCTGAGTCCAGGGCCAACGCCAACTGGCAAC...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGAAAGAGGTTGCCAGTTaGCGTTGGCCCTGGACTCAG +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMKEVAS*RWPWTQ
Trigger: CTGAGTCCAGGGCCAACGCCAACTGGCAACCTCTTT...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTCTTACTGTCTCCACTTaGTCACTGTCATGTGACCTC +
Preference number: 4 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPLTVST*SLSCDL
Trigger: GAGGTCACATGACAGTGACCAAGTGGAGACAGTAAG...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCCACTGCACTCTCTTCTaGTGCAACATCCACAAGCTC +
Preference number: 4 (lower is better)
Translates to: GSSLQLNERGCATQELCSHCTLF*CNIHKL
Trigger: GAGCTTGTGGATGTTGCACCAGAAGAGAGTGCAGTG...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAAGTCCCATGCATCAGATaGACGCCTGAGGGCACTGGG +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQVPCIR*TPEGTG
Trigger: CCCAGTGCCCTCAGGCGTCCATCTGATGCATGGGAC...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATTCGAGTCTCTGGCTTTaGCCTCAGGAGCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHSSLWL*PQEQGR
Trigger: CCTCCCTTGCTCCTGAGGCCAAAGCCAGAGACTCGA...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCATATGCTGGTGGTGGTaGGGAGGCTGTTCGAGTCTC +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTICWWW*GGCSSL
Trigger: GAGACTCGAACAGCCTCCCCACCACCACCAGCATAT...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAACTATGCTCTGGGCTCTaGCTGAAGGAGGCTGCACGG +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQLCSGL*LKEAAR
Trigger: CCGTGCAGCCTCCTTCAGCCAGAGCCCAGAGCATAG...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGAAAAGAATCGAAGGTaGATAGGGAAAGACATGCTG +
Preference number: 4 (lower is better)
Translates to: TAWDLWATSSSTHSTSSSEKNRR*IGKDML
Trigger: CAGCATGTCTTTCCCTATCCACCTTCGATTCTTTTC...AGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATATTGTTTGCACCGCCTaGGCAAAGGGAAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDIVCTA*AKGRCV
Trigger: CACACACCTTCCCTTTGCCCAGGCGGTGCAAACAAT...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCTGGAGCTTGAAGAAGTaGATTGTTTGCACCGCCTGG +
Preference number: 4 (lower is better)
Translates to: GSSLQLNERGCATQELCSWSLKK*IVCTAW
Trigger: CCAGGCGGTGCAAACAATCCACTTCTTCAAGCTCCA...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCCAGATGTGGGCCACATaGGAAGTCCCAGCTCTATTC +
Preference number: 4 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGQMWAT*EVPALF
Trigger: GAATAGAGCTGGGACTTCCCATGTGGCCCACATCTG...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCAGTCTTCTCACTCTaGGAAAGGGCCACCTCTCTC +
Preference number: 4 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGSVFSL*ERATSL
Trigger: GAGAGAGGTGGCCCTTTCCCAGAGTGAGAAGACTGA...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAATTCTGGGACCCATGCTaGTCAGTCTTTCAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQFWDPC*SVFQSS
Trigger: AGAAGACTGAAAGACTGACCAGCATGGGTCCCAGAA...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCTTCTGGGACCCATGCTaGTCAGTCTTTCAGTCTTCT +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCFWDPC*SVFQSS
Trigger: AGAAGACTGAAAGACTGACCAGCATGGGTCCCAGAA...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCCTTGGCTGGGTGGGATaGTGTCTCCAGAGTCCTTTA +
Preference number: 4 (lower is better)
Translates to: TLLAISPDTPTAISPTQSLGWVG*CLQSPL
Trigger: TAAAGGACTCTGGAGACACCATCCCACCCAGCCAAG...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACACCCAGGGCTACAGTTaGCCTAATGTGACTCTTACC +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHTQGYS*PNVTLT
Trigger: GGTAAGAGTCACATTAGGCCAACTGTAGCCCTGGGT...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTGTACCAGAGCTTCAGATaGGACTCAGATCTGTCTGCA +
Preference number: 4 (lower is better)
Translates to: PPQQFHQHRATALSHSDVYQSFR*DSDLSA
Trigger: TGCAGACAGATCTGAGTCCCATCTGAAGCTCTGGTA...CACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAAAACAGCAGAGGGACTTaGACGCCTCTCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQNSRGT*TPLQAG
Trigger: GCCTGCCTGGAGAGGCGTCCAAGTCCCTCTGCTGTT...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTTCAAATGGACACCAATaGCAGCCTCATCCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPSNGHQ*QPHPPF
Trigger: GAAGGGAGGATGAGGCTGCCATTGGTGTCCATTTGA...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCACTGTCCCTACTGCCTaGTATATTCCTGTCCTATCC +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCTVPTA*YIPVLS
Trigger: GGATAGGACAGGAATATACCAGGCAGTAGGGACAGT...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCGCCACCTCCAGACCCTaGACAAGTTGCAGCCTCCTG +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFATSRP*TSCSLL
Trigger: CAGGAGGCTGCAACTTGTCCAGGGTCTGGAGGTGGC...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTCCTTCATCCATACAGTaGGCCAAGGAAGGGATCCCT +
Preference number: 4 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCPSSIQ*AKEGIP
Trigger: AGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGG...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAAGTCTGGAACTGGGCTaGGTGTCTGTCAGTCCACGC +
Preference number: 4 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRSLELG*VSVSPR
Trigger: GCGTGGACTGACAGACACCCAGCCCAGTTCCAGACT...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCCTTTCAGTCTGGAACTaGGCTGGGTGTCTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPLSVWN*AGCLSV
Trigger: GACTGACAGACACCCAGCCCAGTTCCAGACTGAAAG...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCTGGGTGGGAGTACAATaGCGTGATCTTGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGWVGVQ*RDLGSL
Trigger: CAGTGAGCCAAGATCACGCCATTGTACTCCCACCCA...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCTCAGGCTATGGGGGCTaGAGCAGTTGGGGCAGACCT +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFSGYGG*SSWGRP
Trigger: AGGTCTGCCCCAACTGCTCCAGCCCCCATAGCCTGA...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTCCTTTCAGGAGCATGTaGCCCAGATTGATTTGCTGT +
Preference number: 4 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPPFRSM*PRLICC
Trigger: ACAGCAAATCAATCTGGGCCACATGCTCCTGAAAGG...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAACCACACTGGAGCCTaGTGGGGCTCCCAAGGACCT +
Preference number: 4 (lower is better)
Translates to: DIQMPACTFHLTKSKEVANHTGA*WGSQGP
Trigger: AGGTCCTTGGGAGCCCCACCAGGCTCCAGTGTGGTT...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGACAGTCTTTCCACCCTTaGAGGCACCACCAAGGGCCT +
Preference number: 4 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRQSFHP*RHHQGP
Trigger: AGGCCCTTGGTGGTGCCTCCAAGGGTGGAAAGACTG...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCGAAACAGTGAAACTCTaGGCTTTCAGGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: TLLAISPDTPTAISPTQSETVKL*AFRGTG
Trigger: CCCTGTGCCCCTGAAAGCCCAGAGTTTCACTGTTTC...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCGAAACAGTGAAACTCTaGGCTTTCAGGGGCACAGGG +
Preference number: 4 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGETVKL*AFRGTG
Trigger: CCCTGTGCCCCTGAAAGCCCAGAGTTTCACTGTTTC...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACAGCATGCATGCAACCCTaGCTTGGTTTCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTACMQP*LGFQSL
Trigger: CAGGCTCTGGAAACCAAGCCAGGGTTGCATGCATGC...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGCGGTATTGGAAATCCTaGGGTTGGTTAGTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRRYWKS*GWLVKA
Trigger: AGCTTTCACTAACCAACCCCAGGATTTCCAATACCG...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTCGCACAGGACCTTGTTaGGCCTTCGGAGGAGAAGTA +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTRTGPC*AFGGEV
Trigger: TACTTCTCCTCCGAAGGCCCAACAAGGTCCTGTGCG...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCGGGATGGACGCAAGCTaGCTGTCCCAGAGTGTGGAG +
Preference number: 4 (lower is better)
Translates to: DIQMPACTFHLTKSKEVAGMDAS*LSQSVE
Trigger: CTCCACACTCTGGGACAGCCAGCTTGCGTCCATCCC...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTGCTCTCAGGCACTTTTaGTTACTTACCCACCTGGCC +
Preference number: 4 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCALRHF*LLTHLA
Trigger: GGCCAGGTGGGTAAGTAACCAAAAGTGCCTGAGAGC...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTACTCTCTGTCTTCCTTaGTTTCAGGCTGCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWATLCLP*FQAAPG
Trigger: CCCTGGAGCAGCCTGAAACCAAGGAAGACAGAGAGT...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACAACCTCTTCCTTTGCGTaGCTCCCCTGCGTTGTTTGC +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTTSSFA*LPCVVC
Trigger: GCAAACAACGCAGGGGAGCCACGCAAAGGAAGAGGT...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAAGAAGATACTACTACATaGGGGAGAAATGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQEDTTT*GRNGWA
Trigger: AGCCCACCCATTTCTCCCCCATGTAGTAGTATCTTC...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR TCA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCTCATGTCGAGGTGGATaGTCCAAATCCTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: GNHRTLGNAIRTWALESASCRGG*SKSCPA
Trigger: TGCAGGACAGGATTTGGATCATCCACCTCGACATGA...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp TGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTTGTCCAGCTCCTTTCTaGGGTCATGTCGAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: WGNHRTLGNAIRTWALESCPAPF*GHVEVD
Trigger: ATCCACCTCGACATGACCTCAGAAAGGAGCTGGACA...ACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTTCAGCCACTCTGATGTaGTGGAGCCAATCCAGGTGT +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTSATLM*WSQSRC
Trigger: ACACCTGGATTGGCTCCATCACATCAGAGTGGCTGA...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTAATCAATCCCTGGGAGTaGGCTGCTCTATGCCAGGAC +
Preference number: 4 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLINPWE*AALCQD
Trigger: GTCCTGGCATAGAGCAGCTCACTCCCAGGGATTGAT...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCGACACATGGGTTATTTaGAACCCCAGGGGGTCAACT +
Preference number: 4 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGDTWVI*NPRGST
Trigger: AGTTGACCCCCTGGGGTTTCAAATAACCCATGTGTC...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTCACTTAGGCTGGGTATaGCTCCAGCAATATAGGCTC +
Preference number: 4 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCHLGWV*LQQYRL
Trigger: GAGCCTATATTGCTGGAGTCATACCCAGCCTAAGTG...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGGCAGATTCTGGGATTaGAATCCAGGCTGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRGRFWD*NPGWCG
Trigger: GCCACACCAGCCTGGATTTCAATCCCAGAATCTGCC...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACATCTCTAGACAACAGTaGGGAGTCAAGAGCCCAAGA +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHISRQQ*GVKSPR
Trigger: TCTTGGGCTCTTGACTCCTCACTGTTGTCTAGAGAT...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTAATAAGGCAGCTGTATaGGACCCATGGAGAAACCCA +
Preference number: 4 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPNKAAV*DPWRNP
Trigger: TGGGTTTCTCCATGGGTCTCATACAGCTGCCTTATT...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACAATAAGGCAGCTGTATaGGACCCATGGAGAAACCCA +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHNKAAV*DPWRNP
Trigger: TGGGTTTCTCCATGGGTCTCATACAGCTGCCTTATT...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGCTGATAGACATTTACTaGACTTGGGTATGCCAGATC +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRLIDIY*TWVCQI
Trigger: GATCTGGCATACCCAAGTTCAGTAAATGTCTATCAG...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCGGGGTAGAGTTGCTTTaGCAGTCCCAAATCCAGTTC +
Preference number: 4 (lower is better)
Translates to: TLLAISPDTPTAISPTQSGVELL*QSQIQF
Trigger: GAACTGGATTTGGGACTGTCAAAGCAACTCTACCCC...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGGCCTTTCCCACTTTGTaGGCTGTAAAATTAGCCTTT +
Preference number: 4 (lower is better)
Translates to: GETGQMTASVTPSPTLGRAFPTL*AVKLAF
Trigger: AAAGGCTAATTTTACAGCTCACAAAGTGGGAAAGGC...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGCATCTCCCTGGTGCCTaGCACAAAGTAGGTCTTGAG +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMHLPGA*HKVGLE
Trigger: CTCAAGACCTACTTTGTGTCAGGCACCAGGGAGATG...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCGCAATGGTCAGTTATTaGGCTGTGGAGTGCCTTCAA +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLAMVSY*AVECLQ
Trigger: TTGAAGGCACTCCACAGCTCAATAACTGACCATTGC...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCCACAGCACCAAATTATaGCACATTAGAATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSHSTKL*HIRILP
Trigger: AGGAAGGATTCTAATGTGTCATAATTTGGTGCTGTG...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCGACAGAAAGGAGGGGTaGTACTGGGGCCCTAGGGTT +
Preference number: 4 (lower is better)
Translates to: DIQMPACTFHLTKSKEVADRKEG*YWGPRV
Trigger: AACCCTAGGGCCCCAGTATCACCCCTCCTTTCTGTC...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACAGTGAGACAGGCCAGATaGCAGCCTCAGTTACCCCTT +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTVRQAR*QPQLPL
Trigger: AAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCAC...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCCTGCGTGGACACCTATaGTTATGGACATGGACCCAG +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTLRGHL*LWTWTQ
Trigger: CTGGGTCCATGTCCATAATCATAGGTGTCCACGCAG...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCTGGCCCTCTTTTCTATaGCATGGGGCAGTGTTTGAG +
Preference number: 4 (lower is better)
Translates to: TLLAISPDTPTAISPTQSWPSFL*HGAVFE
Trigger: CTCAAACACTGCCCCATGTCATAGAAAAGAGGGCCA...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGGTCATGGGCCCTCTCTaGGCTTTGGCTCTCTTTTCT +
Preference number: 4 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKVMGPL*ALALFS
Trigger: AGAAAAGAGAGCCAAAGCTCAGAGAGGGCCCATGAC...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCAACACCCCAAAGACCTaGGGCTCCTCTACAATTTGT +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLNTPKT*GSSTIC
Trigger: ACAAATTGTAGAGGAGCCTCAGGTCTTTGGGGTGTT...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGAGGCACCCCAAGTaGGAAACAATATACAAATGC +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPQRHPK*ETIYKC
Trigger: GCATTTGTATATTGTTTCTCACTTGGGGTGCCTCTG...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCCAGAGGCACCCCAAGTaGGAAACAATATACAAATGC +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCQRHPK*ETIYKC
Trigger: GCATTTGTATATTGTTTCTCACTTGGGGTGCCTCTG...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTTACTCTGTGGGAACTTaGGTGAGAGGGGATGTGAAC +
Preference number: 4 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWAYSVGT*VRGDVN
Trigger: GTTCACATCCCCTCTCACTCAAGTTCCCACAGAGTA...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ACCAGTTCCTCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCCAGGTTCCCAAGTCTaGTTTATGATGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TSSSVSGRGINTGGTILRPGSQV*FMMSAA
Trigger: AGCAGCTGACATCATAAAGCAGACTTGGGAACCTGG...CCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGAGGAACTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000448997.5
CDS-3UTR GCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGCCAGGTTCCCAAGTCTaGTTTATGATGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMPGSQV*FMMSAA
Trigger: AGCAGCTGACATCATAAAGCAGACTTGGGAACCTGG...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTCTCCAAGGATGTACTaGACCGGCATCCTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPSPRMY*TGILCN
Trigger: ATTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGA...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTGCAGAAGGAAACCCTTaGCCCAGTGCTACCTGGGAG +
Preference number: 4 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCAEGNP*PSATWE
Trigger: CTCCCAGGTAGCACTGGGGCAAGGGTTTCCTTCTGC...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTAGCTGCAGCAGAGGATaGTGCCTATTGGACCATACT +
Preference number: 4 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWASCSRG*CLLDHT
Trigger: AGTATGGTCCAATAGGCAGCATCCTCTGCTGCAGCT...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGGAATGGACATTCAGATaGCAGCATGCACATTCCACT +
Preference number: 4 (lower is better)
Translates to: RSHPREGQILGLKSRLVWEWTFR*QHAHST
Trigger: AGTGGAATGTGCATGCTGGCATCTGAATGTCCATTC...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATTGGGGCACTGGGAGCTaGAGTGTGACCTCTACCAAA +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHWGTGS*SVTSTK
Trigger: TTTGGTAGAGGTCACACTGCAGCTCCCAGTGCCCCA...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTGTCACTCTCCAACACTaGACTCTCTTCTGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWAVTLQH*TLFWCN
Trigger: GTTGCACCAGAAGAGAGTGCAGTGTTGGAGAGTGAC...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCCTTATGTTGGTCCCATaGATCAGATGGACGCCTGAG +
Preference number: 4 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFLMLVP*IRWTPE
Trigger: CTCAGGCGTCCATCTGATGCATGGGACCAACATAAG...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCAAGAAGTGGATTGTTTaGACCGCCTGGGCAAAGGGA +
Preference number: 4 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGKKWIV*TAWAKG
Trigger: TCCCTTTGCCCAGGCGGTGCAAACAATCCACTTCTT...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCTCAAAGTCAGGGGCTaGTGTGCTCATTTCACAGAT +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLLKVRG*CAHFTD
Trigger: ATCTGTGAAATGAGCACAGCAGCCCCTGACTTTGAG...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTATTGAATATAAGTCTTaGCATGATCCACCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSIEYKS*HDPPLP
Trigger: TGGAAGGGGTGGATCATGGCAAGACTTATATTCAAT...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCCCAGACTGTCCCTACTaGCTGGTATATTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: TLLAISPDTPTAISPTQSPDCPY*LVYSCP
Trigger: AGGACAGGAATATACCAGGCAGTAGGGACAGTCTGG...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCCTCTACCTCAAGGGTTaGCTTTGGACTGTGTCCCCA +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTLYLKG*LWTVSP
Trigger: TGGGGACACAGTCCAAAGGCAACCCTTGAGGTAGAG...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCAGCTCAGTCTGCGTCTaGTGCTTTCTGTTTGATTCA +
Preference number: 4 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPSSVCV*CFLFDS
Trigger: TGAATCAAACAGAAAGCAGCAGACGCAGACTGAGCT...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAATGTCCAGGCTGGAGTaGAGTGGCGCTATTATAGCT +
Preference number: 4 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRAMSRLE*SGAIIA
Trigger: AGCTATAATAGCGCCACTGCACTCCAGCCTGGACAT...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTTTCAAGCAATTCTCCTaGTTCAGCCTCCCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCFKQFS*FSLPSS
Trigger: GCTACTCGGGAGGCTGAAGCAGGAGAATTGCTTGAA...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCATTTGCTGTGACAGATaGTGGGTGGGAGGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFICCDR*WVGGAG
Trigger: CCCGGCACCTCCCACCCAGCATCTGTCACAGCAAAT...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAAATTTGCTGTGACAGATaGTGGGTGGGAGGTGCCGGG +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQICCDR*WVGGAG
Trigger: CCCGGCACCTCCCACCCAGCATCTGTCACAGCAAAT...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGCAGGAGGAGTCTATGTaGAAGTCCATGAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMQEESM*KSMSSA
Trigger: TGCAGAACTCATGGACTTGCACATAGACTCCTCCTG...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCCAGGAGGAGTCTATGTaGAAGTCCATGAGTTCTGCA +
Preference number: 4 (lower is better)
Translates to: GSSLQLNERGCATQELCSQEESM*KSMSSA
Trigger: TGCAGAACTCATGGACTTGCACATAGACTCCTCCTG...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACAACACACGTGCATGCATaGAACCCTGGCTTGGTTTCC +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTTHVHA*NPGLVS
Trigger: GGAAACCAAGCCAGGGTTGCATGCATGCACGTGTGT...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGACACACACACACACGTaGATGCATGCAACCCTGGCT +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTETHTHT*MHATLA
Trigger: AGCCAGGGTTGCATGCATGCACGTGTGTGTGTGTGT...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGACCTGCCTCACCTTaGTGTGTGACACTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQRPASP*CVTLGK
Trigger: CTTGCCCAGTGTCACACAGCAAGGTGAGGCAGGTCT...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACAAGACCTGCCTCACCTTaGTGTGTGACACTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTRPASP*CVTLGK
Trigger: CTTGCCCAGTGTCACACAGCAAGGTGAGGCAGGTCT...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGGTGGTTCTCAGGGGGTaGCAAGCTCCAAGCATGAAG +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQVVLRG*QAPSMK
Trigger: CTTCATGCTTGGAGCTTGGCACCCCCTGAGAACCAC...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAAGTTCCCAGGCGGGTTTaGTGGGAGAATCACCAGCCT +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQVPRRV*WENHQP
Trigger: AGGCTGGTGATTCTCCCAGCAAACCCGCCTGGGAAC...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAAAGAATGAGTTCCAGGTaGCCAGTACAGCTAAGCAAA +
Preference number: 4 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQRMSSR*PVQLSK
Trigger: TTTGCTTAGCTGTACTGGGCACCTGGAACTCATTCT...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTGCCCATTCCTTGTaGCTGGCACAGTGCCAGCAG +
Preference number: 4 (lower is better)
Translates to: DIQMPACTFHLTKSKEVASAHSL*LAQCQQ
Trigger: CTGCTGGCACTGTGCCAGGCACAAGGAATGGGCACT...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCACCTCAGCTCACCATTaGAACTACTCTGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: GSSLQLNERGCATQELCSTSAHH*NYSVGT
Trigger: AGTTCCCACAGAGTAGTTGCAATGGTGAGCTGAGGT...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAACCAAGATCACGCCACTaGACTCCAGCCTGGCAACAG +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQPRSRH*TPAWQQ
Trigger: CTGTTGCCAGGCTGGAGTGCAGTGGCGTGATCTTGG...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCAGTGGTGCAAGAAAATaGTTTTACTCTGTCTACTGC +
Preference number: 4 (lower is better)
Translates to: SLDSISSMSSSHSACKCSSGARK*FYSVYC
Trigger: GCAGTAGACAGAGTAAAAGCATTTTCTTGCACCACT...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCAGTTCCTCTGTTTCTaGCCGAGGAATAAACACTGG +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLQFLCF*PRNKHW
Trigger: CCAGTGTTTATTCCTCGGCCAGAAACAGAGGAACTG...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCTCAATACTTTACTaGCCATATCCCCCGATACCC +
Preference number: 4 (lower is better)
Translates to: HRTLGNAIRTWALESAIHLSILY*PYPPIP
Trigger: GGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAG...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACAATGCACCCAGGGCAGTaGAGGACTAATCAATCCCTG +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTMHPGQ*RTNQSL
Trigger: CAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCAT...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTATGCACCCAGGGCAGTaGAGGACTAATCAATCCCTG +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTMHPGQ*RTNQSL
Trigger: CAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCAT...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATGCTCGAGCCAGGCTTaGCCAGGGAATTGTGTACGC +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQCSSQA*PGNCVR
Trigger: GCGTACACAATTCCCTGGCCAAGCCTGGCTCGAGCA...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTTGGAATGAGACAGCCTaGTTTGCCATGTTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPWNETA*FAMFLR
Trigger: CCTAAGAAACATGGCAAACCAGGCTGTCTCATTCCA...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTCCATGCCTGGCGAATaGACATTCAGATGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPSMPGE*TFRCQH
Trigger: ATGCTGGCATCTGAATGTCCATTCGCCAGGCATGGA...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ACCAGTTCCTCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCTTACTGTCTCCACTTaGTCACTGTCATGTGACCTC +
Preference number: 4 (lower is better)
Translates to: TSSSVSGRGINTGGTILRLTVST*SLSCDL
Trigger: GAGGTCACATGACAGTGACCAAGTGGAGACAGTAAG...CCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGAGGAACTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTCACCCAGGTTCCTTCTaGAGCAGCCTCCTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTHPGSF*SSLLKG
Trigger: TCCTTTAAGGAGGCTGCTCCAGAAGGAACCTGGGTG...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATCTGCCTGCCTTATGTTaGTCCCATGCATCAGATGGA +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDLPALC*SHASDG
Trigger: TCCATCTGATGCATGGGACCAACATAAGGCAGGCAG...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCCTCCTGTCTATGCTCTaGGCTCTGGCTGAAGGAGGC +
Preference number: 4 (lower is better)
Translates to: DIQMPACTFHLTKSKEVALLSML*ALAEGG
Trigger: GCCTCCTTCAGCCAGAGCCCAGAGCATAGACAGGAG...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGGTTTGGGGCAAGGATTaGGAGCAGCCAATAGCCCAG +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQVWGKD*EQPIAQ
Trigger: CTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAAC...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGAGCCAGCTAAGTGTTTaGGGCAAGGATTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKSQLSV*GKDWEQ
Trigger: CTGCTCCCAATCCTTGCCCCAAACACTTAGCTGGCT...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCCTTGAGTCTTCGAAGTaGCCATTGCTCAACTTGAAT +
Preference number: 4 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSLESSK*PLLNLN
Trigger: ATTCAAGTTGAGCAATGGCCACTTCGAAGACTCAAG...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATTCTCCATGTGGCTCCTaGGTTAGGACTGGCTTCAGG +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHSPCGS*VRTGFR
Trigger: CCTGAAGCCAGTCCTAACCCAGGAGCCACATGGAGA...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GTTAAGCCTCAGTCCCTTCATCCATACAGTGGGCCAAGGAAGGGATCCCTGATGCACCCTGCTGAGCCTTaGTGTCCTCAACTTTGTAAT +
Preference number: 4 (lower is better)
Translates to: VKPQSLHPYSGPRKGSLMHPAEP*CPQLCN
Trigger: ATTACAAAGTTGAGGACACCAAGGCTCAGCAGGGTG...CATCAGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGGGACTGAGGCTTAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTTCAAATGGACACCAATaGCAGCCTCATCCTCCCTTC +
Preference number: 4 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWASNGHQ*QPHPPF
Trigger: GAAGGGAGGATGAGGCTGCCATTGGTGTCCATTTGA...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCTCTCTGATAGTCAAATaGACACCAATGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCSLIVK*TPMAAS
Trigger: TGAGGCTGCCATTGGTGTCCATTTGACTATCAGAGA...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCAGCTCTTTAGGCCCCTaGTCCCCAGAAATGCATTCA +
Preference number: 4 (lower is better)
Translates to: GNHRTLGNAIRTWALESASSLGP*SPEMHS
Trigger: TGAATGCATTTCTGGGGACCAGGGGCCTAAAGAGCT...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCAGACTGTGTCCCCACATaGTCACATTTGCATCTCCAG +
Preference number: 4 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPDCVPT*SHLHLQ
Trigger: CTGGAGATGCAAATGTGACCATGTGGGGACACAGTC...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTTCAGGTCTAGGAGAGTaGTCTTCACAACTCTACCTC +
Preference number: 4 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPSGLGE*SSQLYL
Trigger: GAGGTAGAGTTGTGAAGACCACTCTCCTAGACCTGA...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTCCTTCATCCATACAGTaGGCCAAGGAAGGGATCCCT +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTPSSIQ*AKEGIP
Trigger: AGGGATCCCTTCCTTGGCCCACTGTATGGATGAAGG...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCTTTCAGTCTGGAACTaGGCTGGGTGTCTGTCAGTC +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTELSVWN*AGCLSV
Trigger: GACTGACAGACACCCAGCCCAGTTCCAGACTGAAAG...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGGAGAGTAGTGAGCAATaGTCAGTTATTGAGCTGTGG +
Preference number: 4 (lower is better)
Translates to: RSHPREGQILGLKSRLVWESSEQ*SVIELW
Trigger: CCACAGCTCAATAACTGACCATTGCTCACTACTCTC...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTATGATGAAGAAACAGTaGCTTTCAGTGCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPMMKKQ*LSVRAK
Trigger: CTTGGCCCGCACTGAAAGCCACTGTTTCTTCATCAT...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGAGCCTCTCAAGTAGCTaGGATTACAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMSLSSS*DYRREP
Trigger: TGGCTCACGCCTGTAATCCCAGCTACTTGAGAGGCT...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAGCCTCTCAAGTAGCTaGGATTACAGGCGTGAGCCA +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTSLSSS*DYRREP
Trigger: TGGCTCACGCCTGTAATCCCAGCTACTTGAGAGGCT...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTACTCATGGAGTACTTaGGGCAACCACACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKYSWST*GNHTGA
Trigger: GGCTCCAGTGTGGTTGCCCCAAGTACTCCATGAGTA...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGGCCCATGTCTACTCATaGAGTACTTGGGGCAACCAC +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMAHVYS*STWGNH
Trigger: GTGGTTGCCCCAAGTACTCCATGAGTAGACATGGGC...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTCCAACTTTGGGAAGGTaGTCTCAGCCCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: WGNHRTLGNAIRTWALESPTLGR*SQPSAI
Trigger: GATTGCTGAGGGCTGAGACCACCTTCCCAAAGTTGG...ACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTGGCCTGGCTTACAGTTaGTGCCTAATAAATGACTGT +
Preference number: 4 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPGLAYS*CLINDC
Trigger: ACAGTCATTTATTAGGCACCAACTGTAAGCCAGGCC...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCATGCATGCAACCCTaGCTTGGTTTCCAGAGCCTG +
Preference number: 4 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRACMQP*LGFQSL
Trigger: CAGGCTCTGGAAACCAAGCCAGGGTTGCATGCATGC...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAACACTGGGCAAGTCATaGGCCCTCTCTGAGCTTTGG +
Preference number: 4 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRTLGKS*ALSELW
Trigger: CCAAAGCTCAGAGAGGGCCCATGACTTGCCCAGTGT...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCATGGAAATCCTGGGGTTaGTTAGTGAAAGCTGGGAGG +
Preference number: 4 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPWKSWG*LVKAGR
Trigger: CCTCCCAGCTTTCACTAACCAACCCCAGGATTTCCA...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTGCAAAGCACCGGTATTaGAAATCCTGGGGTTGGTTA +
Preference number: 4 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPAKHRY*KSWGWL
Trigger: TAACCAACCCCAGGATTTCCAATACCGGTGCTTTGC...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCACTCCTCAAGACCAAGTaGAAGGGAAGAGCTCTGCAA +
Preference number: 4 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRALLKTK*KGRALQ
Trigger: TTGCAGAGCTCTTCCCTTCCACTTGGTCTTGAGGAG...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGGCATTAGTACAGCTGTaGGCAGGGTTCCTAAGCCAG +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTEALVQL*AGFLSQ
Trigger: CTGGCTTAGGAACCCTGCCCACAGCTGTACTAATGC...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGGCTCTCAGGCACTTTTaGTTACTTACCCACCTGGCC +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMALRHF*LLTHLA
Trigger: GGCCAGGTGGGTAAGTAACCAAAAGTGCCTGAGAGC...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTGTATCAATCCCAGGTGTaGAAACCTCTTCCTTTGCGT +
Preference number: 4 (lower is better)
Translates to: PPQQFHQHRATALSHSDVYQSQV*KPLPLR
Trigger: ACGCAAAGGAAGAGGTTTCCACACCTGGGATTGATA...CACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGATCACAGCAGGGATTTaGCTCCAGCCCAAGGGGATT +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTEITAGI*LQPKGI
Trigger: AATCCCCTTGGGCTGGAGCCAAATCCCTGCTGTGAT...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000434410.5
3UTR CAA 72 bp GCAGCATTTGTGTTGGAGCTTGAAGAAGTGGATTGTTaGCACCGCCTGGGCAAAGGGAAGGTGTGTGTTCAG +
Preference number: 4 (lower is better)
Translates to: AAFVLELEEVDC*HRLGKGKVCVQ
Trigger: CTGAACACACACCTTCCCTTTGCCCAGGCGGTGCAAACAATCCACTTCTTCAAGCTCCAACACAAATGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 72 bp CAGCTAAGCAAAGCACCGGTATTGGAAATCCTGGGGTaGGTTAGTGAAAGCTGGGAGGAGCCTGTGGTTAGT +
Preference number: 4 (lower is better)
Translates to: QLSKAPVLEILG*VSESWEEPVVS
Trigger: ACTAACCACAGGCTCCTCCCAGCTTTCACTAACCAACCCCAGGATTTCCAATACCGGTGCTTTGCTTAGCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGTCATGTCGAGGTGGATaGTCCAAATCCTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMSCRGG*SKSCPA
Trigger: TGCAGGACAGGATTTGGATCATCCACCTCGACATGA...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTTCATGTCGAGGTGGATaGTCCAAATCCTGTCCTGCA +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTSCRGG*SKSCPA
Trigger: TGCAGGACAGGATTTGGATCATCCACCTCGACATGA...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATTGTCCAGCTCCTTTCTaGGGTCATGTCGAGGTGGAT +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHCPAPF*GHVEVD
Trigger: ATCCACCTCGACATGACCTCAGAAAGGAGCTGGACA...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR TCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCAAGCCTTCAGTTAAATaGACGTGGATGTGCGACCCA +
Preference number: 4 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPKPSVK*TWMCDP
Trigger: TGGGTCGCACATCCACGTTCATTTAACTGAAGGCTT...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACAATTTCCTGTCGCTGTTaGCAGGAAGGCTGGATCTGC +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTISCRC*QEGWIC
Trigger: GCAGATCCAGCCTTCCTGTCAACAGCGACAGGAAAT...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTCACTTAGGCTGGGTATaGCTCCAGCAATATAGGCTC +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTHLGWV*LQQYRL
Trigger: GAGCCTATATTGCTGGAGTCATACCCAGCCTAAGTG...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCGGGGTAGAGTTGCTTTaGCAGTCCCAAATCCAGTTC +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTGVELL*QSQIQF
Trigger: GAACTGGATTTGGGACTGTCAAAGCAACTCTACCCC...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTGTTACAGAGGCCCTTGTaGTTATACTCAGTTTACCTG +
Preference number: 4 (lower is better)
Translates to: PPQQFHQHRATALSHSDVLQRPL*LYSVYL
Trigger: CAGGTAAACTGAGTATAATCACAAGGGCCTCTGTAA...CACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGGCAATTGCATCACTCTaGCCTCTGCTTCCATTGTTA +
Preference number: 4 (lower is better)
Translates to: VAQGSGALESSKWPLLNLAIASL*PLLPLL
Trigger: TAACAATGGAAGCAGAGGTCAGAGTGATGCAATTGC...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGTTTAGGTCTGAAGGTTaGGGAAGAGTTCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQFRSEG*GRVPLA
Trigger: GGCCAGGGGAACTCTTCCTCAACCTTCAGACCTAAA...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTTCTGATTTCTGGTTATaGGGCCAAAGATCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPSDFWL*GQRSQR
Trigger: CCTTTGGGATCTTTGGCCTCATAACCAGAAATCAGA...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCAGCTCAGCCTCACACTaGCTTCCAGGAACAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFSSASH*LPGTAE
Trigger: CTCTGCTGTTCCTGGAAGTCAGTGTGAGGCTGAGCT...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCTCTCTGAGGATGTCATaGAGGTTGAGTAAGATAATC +
Preference number: 4 (lower is better)
Translates to: IPRYPHSNFTNTEQLPSASLRMS*RLSKII
Trigger: GATTATCTTACTCAACCTTCATGACATCCTCAGAGA...GGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCTGAAATGCTCCCCATaGCAAGGCAAACTTCATATC +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLLKCSP*QGKLHI
Trigger: GATATGAAGTTTGCCTTGTCATGGGGAGCATTTCAG...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCACAGGCCTAGGGACCTaGAATGCTCCCCATGACAAG +
Preference number: 4 (lower is better)
Translates to: DIQMPACTFHLTKSKEVATGLGT*NAPHDK
Trigger: CTTGTCATGGGGAGCATTTCAGGTCCCTAGGCCTGT...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGGACAGGCGGGCTGAGTaGAATGATGAAGAAACAGTG +
Preference number: 4 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKDRRAE*NDEETV
Trigger: CACTGTTTCTTCATCATTTCACTCAGCCCGCCTGTC...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCACAGCACCAAATTATaGCACATTAGAATCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATHSTKL*HIRILP
Trigger: AGGAAGGATTCTAATGTGTCATAATTTGGTGCTGTG...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGTTGGTGCCTAATAAATaGCTGTGCAGGAATGATGGG +
Preference number: 4 (lower is better)
Translates to: VAQGSGALESSKWPLLNLLVPNK*LCRNDG
Trigger: CCCATCATTCCTGCACAGTCATTTATTAGGCACCAA...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTCTGTGCAAGGGTGTGTaGGTCTCTATGCTGTGTACA +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTLCKGV*VSMLCT
Trigger: TGTACACAGCATAGAGACTCACACACCCTTGCACAG...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTGCCATGAACTCCTTATaGGTAGGGACCGTGTCAATT +
Preference number: 4 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWAAMNSL*VGTVSI
Trigger: AATTGACACGGTCCCTACTCATAAGGAGTTCATGGC...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAAAGTGCCAGCAGATGGTaGCTGAATGCATGCCCCATG +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQSASRW*LNACPM
Trigger: CATGGGGCATGCATTCAGTCACCATCTGCTGGCACT...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCAAAGGTTCTCCAGAGTaGTTCCAGGTTCCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGKGSPE*FQVPKS
Trigger: AGACTTGGGAACCTGGAAGCACTCTGGAGAACCTTT...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTAAAGGTTCTCCAGAGTaGTTCCAGGTTCCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWAKGSPE*FQVPKS
Trigger: AGACTTGGGAACCTGGAAGCACTCTGGAGAACCTTT...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCTCTCCAAGGATGTACTaGACCGGCATCCTCTGCAAT +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTSPRMY*TGILCN
Trigger: ATTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGA...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTTTCTCTTGCTCTCCATaGCTGGCGAATGGACATTCA +
Preference number: 4 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCFSCSP*LANGHS
Trigger: TGAATGTCCATTCGCCAGGCATGGAGAGCAAGAGAA...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTTCTCTTGCTCTCCATaGCTGGCGAATGGACATTCA +
Preference number: 4 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGFSCSP*LANGHS
Trigger: TGAATGTCCATTCGCCAGGCATGGAGAGCAAGAGAA...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCTCAGCAGAGTCAAGCTaGACATTTTTCTGGGCAGAA +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLSAESS*TFFWAE
Trigger: TTCTGCCCAGAAAAATGTGCAGCTTGACTCTGCTGA...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGCTTATGTTGGTCCCATaGATCAGATGGACGCCTGAG +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMLMLVP*IRWTPE
Trigger: CTCAGGCGTCCATCTGATGCATGGGACCAACATAAG...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTCCCTTCTTTCCAGACTaGCTTGTATCCCTGCCTGCC +
Preference number: 4 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCPFFPD*LVSLPA
Trigger: GGCAGGCAGGGATACAAGGCAGTCTGGAAAGAAGGG...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATCATTCTGCCTGCAAGTaGTCCTTGACATATGCTGGT +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDHSACK*SLTYAG
Trigger: ACCAGCATATGTCAAGGAGCACTTGCAGGCAGAATG...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCATCCTCCCATTCTGCCTaGAAGTGCTCCTTGACATAT +
Preference number: 4 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRASSHSA*KCSLTY
Trigger: ATATGTCAAGGAGCACTTGCAGGCAGAATGGGAGGA...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTAAGACCTCAGGGGCTTaGACAGCCTGGACTCCATCA +
Preference number: 4 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCKTSGA*TAWTPS
Trigger: TGATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTT...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAAAAGACCTCAGGGGCTTaGACAGCCTGGACTCCATCA +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQKTSGA*TAWTPS
Trigger: TGATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTT...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTGGAGTCAGGAGTCAAGTaGTGTGTTACTTCAAGTAAG +
Preference number: 4 (lower is better)
Translates to: PPQQFHQHRATALSHSDVESGVK*CVTSSK
Trigger: CTTACTTGAAGTAACACAGCACTTGACTCCTGACTC...CACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTAGGACTCAGATCTGTCTaGACACCCAGGGCTACAGTT +
Preference number: 4 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLGLRSV*TPRATV
Trigger: AACTGTAGCCCTGGGTGTGCAGACAGATCTGAGTCC...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCAACCTGACCTGCAACTaGACCCTGCTGAGCCTTGGT +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFNLTCN*TLLSLG
Trigger: ACCAAGGCTCAGCAGGGTGCAGTTGCAGGTCAGGTT...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAAAAAGAGCAGCCTCAATaGTTCTCTAACCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQKEQPQ*FSNPVT
Trigger: AGTTACAGGGTTAGAGAAGCATTGAGGCTGCTCTTT...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGGGAGAGAGCTCAGTCTaGGTCTGCTGCTTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTEGESSV*VCCFLF
Trigger: AAACAGAAAGCAGCAGACGCAGACTGAGCTCTCTCC...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGGTGATCTTGGCTCACTaGAACATCTGCCTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMVILAH*NICLSV
Trigger: AACCGAGAGGCAGATGTTGCAGTGAGCCAAGATCAC...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACATGGCCCAGATTGATTTaGTGTGACAGATGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTWPRLI*CDRCWV
Trigger: CACCCAGCATCTGTCACAGCAAATCAATCTGGGCCA...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTCTGGCTTACAGTTGGTaGCTAATAAATGACTGTGCA +
Preference number: 4 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPLAYSW*LINDCA
Trigger: TGCACAGTCATTTATTAGGCACCAACTGTAAGCCAG...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAACACACACACGTGCATaGATGCAACCCTGGCTTGGT +
Preference number: 4 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRTHTRA*MQPWLG
Trigger: ACCAAGCCAGGGTTGCATGCATGCACGTGTGTGTGT...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTGGAAGGGAAGAGCTCTaGAAACTGGCAGAGAACTTG +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTGREEL*KLAENL
Trigger: CAAGTTCTCTGCCAGTTTGCAGAGCTCTTCCCTTCC...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCACCTCAGCTCACCATTaGAACTACTCTGTGGGAACT +
Preference number: 4 (lower is better)
Translates to: TLLAISPDTPTAISPTQSTSAHH*NYSVGT
Trigger: AGTTCCCACAGAGTAGTTGCAATGGTGAGCTGAGGT...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCCCCCTAAATTCAGCATaGAGTTTCTCCACCGTAGTG +
Preference number: 4 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGPLNSA*SFSTVV
Trigger: CACTACGGTGGAGAAACTGCATGCTGAATTTAGGGG...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCGTTCTCTCCTATTTCTaGACACTTGCCAGTAGAGGC +
Preference number: 4 (lower is better)
Translates to: GNHRTLGNAIRTWALESAVLSYF*TLASRG
Trigger: GCCTCTACTGGCAAGTGTGCAGAAATAGGAGAGAAC...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCTCTGGTGCCCCAAAATaGCTCTGGTCCTCAGATATA +
Preference number: 4 (lower is better)
Translates to: GNHRTLGNAIRTWALESASGAPK*LWSSDI
Trigger: TATATCTGAGGACCAGAGCCATTTTGGGGCACCAGA...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATTCTGGTGCCCCAAAATaGCTCTGGTCCTCAGATATA +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDSGAPK*LWSSDI
Trigger: TATATCTGAGGACCAGAGCCATTTTGGGGCACCAGA...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCCAGTTCCTCTGTTTCTaGCCGAGGAATAAACACTGG +
Preference number: 4 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPQFLCF*PRNKHW
Trigger: CCAGTGTTTATTCCTCGGCCAGAAACAGAGGAACTG...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACAGAGGTCATGTCGAGGTaGATGATCCAAATCCTGTCC +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTEVMSR*MIQILS
Trigger: GGACAGGATTTGGATCATCCACCTCGACATGACCTC...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTGGAAACACCCCTCACTaGCTCAAGCCTTCAGTTAAA +
Preference number: 4 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCGNTPH*LKPSVK
Trigger: TTTAACTGAAGGCTTGAGCCAGTGAGGGGTGTTTCC...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAGGAAACACCCCTCACTaGCTCAAGCCTTCAGTTAAA +
Preference number: 4 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRAGNTPH*LKPSVK
Trigger: TTTAACTGAAGGCTTGAGCCAGTGAGGGGTGTTTCC...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCTGGAATGAGACAGCCTaGTTTGCCATGTTTCTTAGG +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLWNETA*FAMFLR
Trigger: CCTAAGAAACATGGCAAACCAGGCTGTCTCATTCCA...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAAAGAGGTTGCCAGTTaGCGTTGGCCCTGGACTCAG +
Preference number: 4 (lower is better)
Translates to: DIQMPACTFHLTKSKEVAKEVAS*RWPWTQ
Trigger: CTGAGTCCAGGGCCAACGCCAACTGGCAACCTCTTT...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTACACCCAGGTTCCTTCTaGAGCAGCCTCCTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLHPGSF*SSLLKG
Trigger: TCCTTTAAGGAGGCTGCTCCAGAAGGAACCTGGGTG...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTCTCCTTGACATATGCTaGTGGTGGTGGGGAGGCTGT +
Preference number: 4 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCLLDIC*WWWGGC
Trigger: ACAGCCTCCCCACCACCACCAGCATATGTCAAGGAG...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTAATTGTTTGCACCGCCTaGGCAAAGGGAAGGTGTGTG +
Preference number: 4 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLIVCTA*AKGRCV
Trigger: CACACACCTTCCCTTTGCCCAGGCGGTGCAAACAAT...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACAAATGACCGGAATACATaGGCTGCCAGGTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTNDRNT*AARSDV
Trigger: CACATCTGACCTGGCAGCCCATGTATTCCGGTCATT...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAAGGCCAGGTCCTCATaGCTTCCCATCCCTAATGAC +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQKARSS*LPIPND
Trigger: GTCATTAGGGATGGGAAGCCATGAGGACCTGGCCTT...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAAAGGCCAGGTCCTCATaGCTTCCCATCCCTAATGAC +
Preference number: 4 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRKARSS*LPIPND
Trigger: GTCATTAGGGATGGGAAGCCATGAGGACCTGGCCTT...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACAGAGGAAGAGTTCCCCTaGCCACATCACCTATCAGAA +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTEEEFP*PHHLSE
Trigger: TTCTGATAGGTGATGTGGCCAGGGGAACTCTTCCTC...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGGAGTACATCAGAGTCTaGGTTCAGTGGCAGCCACTT +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMEYIRV*VQWQPL
Trigger: AAGTGGCTGCCACTGAACCCAGACTCTGATGTACTC...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCATTAGACACATCCATCTaGTGCCTCATCCCAGAACCT +
Preference number: 4 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRALDTSI*CLIPEP
Trigger: AGGTTCTGGGATGAGGCACCAGATGGATGTGTCTAA...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGAACACACAGACTCAAATaGGCACAGCACCAAATTATG +
Preference number: 4 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGTHRLK*AQHQIM
Trigger: CATAATTTGGTGCTGTGCCCATTTGAGTCTGTGTGT...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTAAGGGAATGGTCACGTaGGGCATCAAGTGCCCCAGA +
Preference number: 4 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCKGMVT*GIKCPR
Trigger: TCTGGGGCACTTGATGCCCCACGTGACCATTCCCTT...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACATACTCATGGAGTACTTaGGGCAACCACACTGGAGCC +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTYSWST*GNHTGA
Trigger: GGCTCCAGTGTGGTTGCCCCAAGTACTCCATGAGTA...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAACCATCCAACCTCCTaGGCCTGGCTTACAGTTGGT +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQNHPTS*AWLTVG
Trigger: ACCAACTGTAAGCCAGGCCCAGGAGGTTGGATGGTT...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAACATGCAACCCTGGCTTaGTTTCCAGAGCCTGGAGCT +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQHATLA*FPEPGA
Trigger: AGCTCCAGGCTCTGGAAACCAAGCCAGGGTTGCATG...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCTCCCAGAGTGTGGAGTaGCTGTGTTCTTTCCCTATA +
Preference number: 4 (lower is better)
Translates to: GNHRTLGNAIRTWALESASQSVE*LCSFPI
Trigger: TATAGGGAAAGAACACAGCCACTCCACACTCTGGGA...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AACGTGGATGTGCGACCCAGGAACTGTGCAGCAAAGACCTCCAGACCCTCCCCTGTGTCAATTTTTCTTTaGTACCACAGTATGACAGTG +
Preference number: 4 (lower is better)
Translates to: NVDVRPRNCAAKTSRPSPVSIFL*YHSMTV
Trigger: CACTGTCATACTGTGGTACCAAAGAAAAATTGACAC...AGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGGGTTACTTACCCACCTaGCCTCTGCAGCAGAGAAAA +
Preference number: 4 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKGYLPT*PLQQRK
Trigger: TTTTCTCTGCTGCAGAGGCCAGGTGGGTAAGTAACC...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGGGCTCAGTCTTCAGTTaGGAGCTGGCAGAAAACACA +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMGSVFS*ELAENT
Trigger: TGTGTTTTCTGCCAGCTCCCAACTGAAGACTGAGCC...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACATTTGCAGGAGAGGTCTaGAGGAAAGAGAGTCACCCC +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTFAGEV*RKESHP
Trigger: GGGGTGACTCTCTTTCCTCCAGACCTCTCCTGCAAA...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp AGAGTGGTCTTCACAACTCTACCTCAAGGGTTGCCTTaGGACTGTGTCCCCACATGGTCACATTTGCATCTC +
Preference number: 4 (lower is better)
Translates to: RVVFTTLPQGLP*DCVPTWSHLHL
Trigger: GAGATGCAAATGTGACCATGTGGGGACACAGTCCAAAGGCAACCCTTGAGGTAGAGTTGTGAAGACCACTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp TCTAGGAGAGTGGTCTTCACAACTCTACCTCAAGGGTaGCCTTTGGACTGTGTCCCCACATGGTCACATTTG +
Preference number: 4 (lower is better)
Translates to: SRRVVFTTLPQG*PLDCVPTWSHL
Trigger: CAAATGTGACCATGTGGGGACACAGTCCAAAGGCAACCCTTGAGGTAGAGTTGTGAAGACCACTCTCCTAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGAAGCCTTCAGTTAAATaGACGTGGATGTGCGACCCA +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMKPSVK*TWMCDP
Trigger: TGGGTCGCACATCCACGTTCATTTAACTGAAGGCTT...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACAAAAAGCATCCAACTGTaGGACAAGGCCTCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: LLLLSLSIKETARWASDTKSIQL*DKASVS
Trigger: GGAAACTGAGGCCTTGTCTCACAGTTGGATGCTTTT...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTGCCTACTCAGAGCACTaGTGGGGCCTTGGGAGGGGC +
Preference number: 4 (lower is better)
Translates to: EALVALVLNNLYKGDYYSAYSEH*WGLGRG
Trigger: GCCCCTCCCAAGGCCCCATCAGTGCTCTGAGTAGGC...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTTTACAGAGGCCCTTGTaGTTATACTCAGTTTACCTG +
Preference number: 4 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPLQRPL*LYSVYL
Trigger: CAGGTAAACTGAGTATAATCACAAGGGCCTCTGTAA...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATTTTCTTCCGTCACTCTaGCACTCCTGCCTCCTTTAC +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHFLPSL*HSCLLY
Trigger: GTAAAGGAGGCAGGAGTGTCAGAGTGACGGAAGAAA...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGTGGAGGTCAGCAATCTaGAATCAGTTTCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTEWRSAI*NQFHRA
Trigger: AGCCCTGTGAAACTGATTTCAGATTGCTGACCTCCA...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAAATAGGAACAGAATGGTaGCACAGCTCTGCTCAGGCC +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQIGTEW*HSSAQA
Trigger: GGCCTGAGCAGAGCTGTGTCACCATTCTGTTCCTAT...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCACAGTTGGCCTAATGTaGCTCTTACCTGCCCATAAA +
Preference number: 4 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFTVGLM*LLPAHK
Trigger: TTTATGGGCAGGTAAGAGTCACATTAGGCCAACTGT...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTACTGTTCCAGAATATCTaGTGCCACTGCTACAGACCC +
Preference number: 4 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLLFQNI*CHCYRP
Trigger: GGGTCTGTAGCAGTGGCATCAGATATTCTGGAACAG...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGGCTTCTCGGATATTCTaGAGGCATCCTACACTGTCA +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMASRIF*RHPTLS
Trigger: TGACAGTGTAGGATGCCTTCAGAATATCCGAGAAGC...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTAGCATGTGGCCCAGATTaGTTTGCTGTGACAGATGCT +
Preference number: 4 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLACGPD*FAVTDA
Trigger: AGCATCTGTCACAGCAAATCAATCTGGGCCACATGC...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGTATGCTGTGTACATGTaGTGTTGCTTGGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTEYAVYM*CCLASP
Trigger: TGGGGAAGCCAAGCAACATCACATGTACACAGCATA...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCCCAGGTTCCCAAGTCTaGTTTATGATGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTPGSQV*FMMSAA
Trigger: AGCAGCTGACATCATAAAGCAGACTTGGGAACCTGG...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGGTCACTCTCCAACACTaGACTCTCTTCTGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQVTLQH*TLFWCN
Trigger: GTTGCACCAGAAGAGAGTGCAGTGTTGGAGAGTGAC...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp TGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTAAAAATGCCACAATGTaGCAAGCCAGGCACATCCCA +
Preference number: 4 (lower is better)
Translates to: WGNHRTLGNAIRTWALESKNATM*QARHIP
Trigger: TGGGATGTGCCTGGCTTGGCACATTGTGGCATTTTT...ACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCGAAGGCAAGGAAAAATaGCACAATGTGCCAAGCCAG +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTEGKEK*HNVPSQ
Trigger: CTGGCTTGGCACATTGTGGCATTTTTCCTTGCCTTC...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCGCATGGTACAGAAGGTaGCAGCAGAGGTATGGGCTA +
Preference number: 4 (lower is better)
Translates to: DIQMPACTFHLTKSKEVAAWYRR*QQRYGL
Trigger: TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGC...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTCTTCCTCCAGCAATTaGATCACTCTGACCTCTGCT +
Preference number: 4 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKSSSSN*ITLTSA
Trigger: AGCAGAGGTCAGAGTGATGCAATTGCTGGAGGAAGA...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCATGCCCATTTCCACGTTaGAATTCCAAAGCCACTTCA +
Preference number: 4 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRACPFPR*NSKATS
Trigger: TGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCA...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTGAGTCAGGAGTCAAGTaGTGTGTTACTTCAAGTAAG +
Preference number: 4 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPESGVK*CVTSSK
Trigger: CTTACTTGAAGTAACACAGCACTTGACTCCTGACTC...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACCAGACTGTCCCTACTaGCTGGTATATTCCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTPDCPY*LVYSCP
Trigger: AGGACAGGAATATACCAGGCAGTAGGGACAGTCTGG...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTCCTGGTCCCCAGAAATaGATTCAGAGCTCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCPGPQK*IQSSAK
Trigger: CTTGGCTGAGCTCTGAATGCATTTCTGGGGACCAGG...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTAAAGAGCAGCCTCAATaGTTCTCTAACCCTGTAACT +
Preference number: 4 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPKEQPQ*FSNPVT
Trigger: AGTTACAGGGTTAGAGAAGCATTGAGGCTGCTCTTT...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGACCACATGGTCACATTTaGATCTCCAGACGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRPHGHI*ISRRPN
Trigger: ATTGGGGCGTCTGGAGATGCAAATGTGACCATGTGG...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCAGAATCCTTCCTATGTaGTCAGAGAACAGGGTTTGT +
Preference number: 4 (lower is better)
Translates to: GSSLQLNERGCATQELCSRILPM*SENRVC
Trigger: ACAAACCCTGTTCTCTGAGCACATAGGAAGGATTCT...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGATGGCCCAGATTGATTTaGTGTGACAGATGCTGGGTG +
Preference number: 4 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRWPRLI*CDRCWV
Trigger: CACCCAGCATCTGTCACAGCAAATCAATCTGGGCCA...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTGTGTGTGAGTCTCTATaGTGTGTACATGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPVCESL*CVHVML
Trigger: CAACATCACATGTACACAGCATAGAGACTCACACAC...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACATCAGATATAGTTGGTTaGCACCCTGCCGGTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTSDIVG*HPAGLP
Trigger: AGGAAGACCGGCAGGGTGGCAACCAACTATATCTGA...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000434410.5
CDS-3UTR CCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTGCCCCAAAATGGCTCTaGTCCTCAGATATAGTTGGT +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTAPKWL*SSDIVG
Trigger: ACCAACTATATCTGAGGACCAGAGCCATTTTGGGGC...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp TGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTTCTGGTGCCCCAAAATaGCTCTGGTCCTCAGATATA +
Preference number: 4 (lower is better)
Translates to: WGNHRTLGNAIRTWALESSGAPK*LWSSDI
Trigger: TATATCTGAGGACCAGAGCCATTTTGGGGCACCAGA...ACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAAGACCCCAGTCCAGTaGCTGACCAGTTCTATGGCA +
Preference number: 4 (lower is better)
Translates to: DIQMPACTFHLTKSKEVAKTPVQ*LTSSMA
Trigger: TGCCATAGAACTGGTCAGCCACTGGACTGGGGTCTT...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCCAGTTCCTCTGTTTCTaGCCGAGGAATAAACACTGG +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTQFLCF*PRNKHW
Trigger: CCAGTGTTTATTCCTCGGCCAGAAACAGAGGAACTG...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGCTCTCAATACTTTACTaGCCATATCCCCCGATACCC +
Preference number: 4 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKLSILY*PYPPIP
Trigger: GGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAG...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGTCCATGCCTGGCGAATaGACATTCAGATGCCAGCAT +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQSMPGE*TFRCQH
Trigger: ATGCTGGCATCTGAATGTCCATTCGCCAGGCATGGA...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCTTGCTCTCCATGCCTaGCGAATGGACATTCAGATG +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHLALHA*RMDIQM
Trigger: CATCTGAATGTCCATTCGCCAGGCATGGAGAGCAAG...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTCACCCAGGTTCCTTCTaGAGCAGCCTCCTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCHPGSF*SSLLKG
Trigger: TCCTTTAAGGAGGCTGCTCCAGAAGGAACCTGGGTG...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCACTGCACTCTCTTCTaGTGCAACATCCACAAGCTC +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHHCTLF*CNIHKL
Trigger: GAGCTTGTGGATGTTGCACCAGAAGAGAGTGCAGTG...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGCCAGCTAAGTGTTTaGGGCAAGGATTGGGAGCAG +
Preference number: 4 (lower is better)
Translates to: DIQMPACTFHLTKSKEVASQLSV*GKDWEQ
Trigger: CTGCTCCCAATCCTTGCCCCAAACACTTAGCTGGCT...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTTTAAAATCAAGGTATTaGCAGGACTGCATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSLKSRY*QDCILL
Trigger: AAGAAGAATGCAGTCCTGCCAATACCTTGATTTTAA...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATGAGGAAGAGTTCCCCTaGCCACATCACCTATCAGAA +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHEEEFP*PHHLSE
Trigger: TTCTGATAGGTGATGTGGCCAGGGGAACTCTTCCTC...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATCAGTCTTCTCACTCTaGGAAAGGGCCACCTCTCTC +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQSVFSL*ERATSL
Trigger: GAGAGAGGTGGCCCTTTCCCAGAGTGAGAAGACTGA...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTAAGCTCTTTAGGCCCCTaGTCCCCAGAAATGCATTCA +
Preference number: 4 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLSSLGP*SPEMHS
Trigger: TGAATGCATTTCTGGGGACCAGGGGCCTAAAGAGCT...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGATGATGAAGAAACAGTaGCTTTCAGTGCGGGCCAAG +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMMMKKQ*LSVRAK
Trigger: CTTGGCCCGCACTGAAAGCCACTGTTTCTTCATCAT...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACATACACGTACGTGTaGGTGCCTGTGCAAGGGTGT +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFTYTYV*VPVQGC
Trigger: ACACCCTTGCACAGGCACCCACACGTACGTGTATGT...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCAAAGCACCGGTATTaGAAATCCTGGGGTTGGTTA +
Preference number: 4 (lower is better)
Translates to: WGNHRTLGNAIRTWALESAKHRY*KSWGWL
Trigger: TAACCAACCCCAGGATTTCCAATACCGGTGCTTTGC...ACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTGGGCTGGCCTGGGTGTaGCCCCAGCTACGAAGATCC +
Preference number: 4 (lower is better)
Translates to: EALVALVLNNLYKGDYYSGLAWV*PQLRRS
Trigger: GGATCTTCGTAGCTGGGGCCACACCCAGGCCAGCCC...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCGTGTCAATTTTTCTTTaGTACCACAGTATGACAGTG +
Preference number: 4 (lower is better)
Translates to: TLGNAIRTWALESAIHLPVSIFL*YHSMTV
Trigger: CACTGTCATACTGTGGTACCAAAGAAAAATTGACAC...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATTTAGAGCACCTGCCCTaGAGTCCCAGCAGTATCAAT +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHLEHLP*SPSSIN
Trigger: ATTGATACTGCTGGGACTCCAGGGCAGGTGCTCTAA...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp CGAATGGACATTCAGATGCCAGCATGCACATTCCACTaGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGG +
Preference number: 4 (lower is better)
Translates to: RMDIQMPACTFH*TKSKEVASWRW
Trigger: CCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTCCATTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 72 bp TCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATaGCATCACTCTGACCTCTGCTTCCATTGTTACATA +
Preference number: 4 (lower is better)
Translates to: SAFLGSWLFLQQ*HHSDLCFHCYI
Trigger: TATGTAACAATGGAAGCAGAGGTCAGAGTGATGCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 72 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATaGAGCTGTGGAGTGCCTTCAACAAGGGTTTTTAGA +
Preference number: 4 (lower is better)
Translates to: VRAKRVVSNGQL*SCGVPSTRVFR
Trigger: TCTAAAAACCCTTGTTGAAGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp GACTACAACTACCATCCCAGCCCCCAGTTCAAACATTaGTGTTCATTGCTCTTCGCCCTGATGGACTGTATG +
Preference number: 4 (lower is better)
Translates to: DYNYHPSPQFKH*CSLLFALMDCM
Trigger: CATACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGGATGGTAGTTGTAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp AACAGGGTTTGTGCTGAGCTTGAGATAAGGCTTCTCTaGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGG +
Preference number: 4 (lower is better)
Translates to: NRVCAELEIRLL*LSLSIKETARW
Trigger: CCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAGCCTTATCTCAAGCTCAGCACAAACCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATCATGCACATTCCACTTaGCTAAGAGTAAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDHAHST*LRVKRL
Trigger: CAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATG...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTGGTCACTGTCATGTaGCCTCAGGCAGTACATACC +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQLVTVM*PQAVHT
Trigger: GGTATGTACTGCCTGAGGTCACATGACAGTGACCAA...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCCTGATAGACATTTACTaGACTTGGGTATGCCAGATC +
Preference number: 4 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFLIDIY*TWVCQI
Trigger: GATCTGGCATACCCAAGTTCAGTAAATGTCTATCAG...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCTTACAGAGGCCCTTGTaGTTATACTCAGTTTACCTG +
Preference number: 4 (lower is better)
Translates to: GNHRTLGNAIRTWALESALQRPL*LYSVYL
Trigger: CAGGTAAACTGAGTATAATCACAAGGGCCTCTGTAA...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGTGGAGGTCAGCAATCTaGAATCAGTTTCACAGGGCT +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQWRSAI*NQFHRA
Trigger: AGCCCTGTGAAACTGATTTCAGATTGCTGACCTCCA...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATGGACTGCTGTATGTGTaGGAGGTAGTCTTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHGLLYV*EVVFGR
Trigger: TCTTCCAAAGACTACCTCTCACACATACAGCAGTCC...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCTCTCTGAGGATGTCATaGAGGTTGAGTAAGATAATC +
Preference number: 4 (lower is better)
Translates to: RTLGNAIRTWALESAIHLSLRMS*RLSKII
Trigger: GATTATCTTACTCAACCTTCATGACATCCTCAGAGA...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATAGCCTTCACACTTATTaGTATAAAATGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: IPPQQFHQHRATALSHSDSLHTY*YKMGEG
Trigger: CCCCTCTCCCATTTTATATCAATAAGTGTGAAGGCT...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCAAGCCTTCACACTTATTaGTATAAAATGGGAGAGGGG +
Preference number: 4 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPSLHTY*YKMGEG
Trigger: CCCCTCTCCCATTTTATATCAATAAGTGTGAAGGCT...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACAGCACCAGTAAGGTATTaGGAGACAATTCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTAPVRY*ETIPHG
Trigger: ACCATGGGGAATTGTCTCTCAATACCTTACTGGTGC...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTTCACTTGTATGTTTGTaGTACACTCTAAGGAACAGG +
Preference number: 4 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPSLVCL*YTLRNR
Trigger: CCTGTTCCTTAGAGTGTATCACAAACATACAAGTGA...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCTCACTTGTATGTTTGTaGTACACTCTAAGGAACAGG +
Preference number: 4 (lower is better)
Translates to: GSSLQLNERGCATQELCSSLVCL*YTLRNR
Trigger: CCTGTTCCTTAGAGTGTATCACAAACATACAAGTGA...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACCAGGTTCCCAAGTCTaGTTTATGATGTCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTPGSQV*FMMSAA
Trigger: AGCAGCTGACATCATAAAGCAGACTTGGGAACCTGG...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACAAAAGGTTCTCCAGAGTaGTTCCAGGTTCCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTKGSPE*FQVPKS
Trigger: AGACTTGGGAACCTGGAAGCACTCTGGAGAACCTTT...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAAAGGTTCTCCAGAGTaGTTCCAGGTTCCCAAGTCT +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQKGSPE*FQVPKS
Trigger: AGACTTGGGAACCTGGAAGCACTCTGGAGAACCTTT...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR GCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTACTGACGGCCAGCCCTaGTGGGGCAGAAGGAAACCC +
Preference number: 4 (lower is better)
Translates to: EALVALVLNNLYKGDYYSTDGQP*WGRRKP
Trigger: GGGTTTCCTTCTGCCCCAGCAGGGCTGGCCGTCAGT...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCATTCAGATGCCAGCATaGACATTCCACTTGACTAAG +
Preference number: 4 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGIQMPA*TFHLTK
Trigger: CTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAAT...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTGCAGCTCAGAGTCCATaGAGCTGGGGCTGGGCACAG +
Preference number: 4 (lower is better)
Translates to: EALVALVLNNLYKGDYYSAAQSP*SWGWAQ
Trigger: CTGTGCCCAGCCCCAGCTGCATGGACTCTGAGCTGC...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAAGTCACTCTCCAACACTaGACTCTCTTCTGGTGCAAC +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQVTLQH*TLFWCN
Trigger: GTTGCACCAGAAGAGAGTGCAGTGTTGGAGAGTGAC...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGCATTCTGCCTGCAAGTaGTCCTTGACATATGCTGGT +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQHSACK*SLTYAG
Trigger: ACCAGCATATGTCAAGGAGCACTTGCAGGCAGAATG...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTAATTCTTCCAGCCTCTaGCCATTTCCACGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTNSSSL*PFPRCN
Trigger: ATTGCAACGTGGAAATGGGCAGAGGCTGGAAGAATT...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAAAAGGATCTATTTGCCTaGCTGTATCCTCCACCAGGC +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQKDLFA*LYPPPG
Trigger: GCCTGGTGGAGGATACAGGCAGGCAAATAGATCCTT...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCCAGAAATACATCGATaGCTATATAGTGTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: AISPDTPTAISPTQSNCPPEIHR*LYSVVS
Trigger: AGAGACAACACTATATAGGCATCGATGTATTTCTGG...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTAGTCCTCAGATATAGTTaGTTGCCACCCTGCCTGAAA +
Preference number: 4 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLVLRYS*LPPCLK
Trigger: TTTCAGGCAGGGTGGCAACCAACTATATCTGAGGAC...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000448997.5
CDS-3UTR CCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGGCCCCAAAATGGCTCTaGTCCTCAGATATAGTTGGT +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQAPKWL*SSDIVG
Trigger: ACCAACTATATCTGAGGACCAGAGCCATTTTGGGGC...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACAAATGCCATAAGAACCTaGGCTCTGGAAAGTGCCATC +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTNAIRT*ALESAI
Trigger: GATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATT...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCTCTCAATACTTTACTaGCCATATCCCCCGATACCC +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHLSILY*PYPPIP
Trigger: GGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAG...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCCTTGCTCTCCATGCCTaGCGAATGGACATTCAGATG +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFLALHA*RMDIQM
Trigger: CATCTGAATGTCCATTCGCCAGGCATGGAGAGCAAG...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCAATGACCGGAATACATaGGCTGCCAGGTCAGATGTG +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFNDRNT*AARSDV
Trigger: CACATCTGACCTGGCAGCCCATGTATTCCGGTCATT...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCAAGACACTGCCATTTTaGGGGGTCACTGTTCAGCCT +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFKTLPF*GVTVQP
Trigger: AGGCTGAACAGTGACCCCCCAAAATGGCAGTGTCTT...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAACTATCAGAAGAGAGGTaGTTAAGGCAATTTATCATG +
Preference number: 4 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQLSEER*LRQFIM
Trigger: CATGATAAATTGCCTTAACCACCTCTCTTCTGATAG...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGTTGGTATCATCTCCCTaGTGCCTGACACAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: NTLLAISPDTPTAISPTQLVSSP*CLTQSR
Trigger: CCTACTTTGTGTCAGGCACCAGGGAGATGATACCAA...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACAACTGTCCCTACTGCCTaGTATATTCCTGTCCTATCC +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTTVPTA*YIPVLS
Trigger: GGATAGGACAGGAATATACCAGGCAGTAGGGACAGT...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTGTGGGCGTGAAAATCTaGCACCCGGGCCGACAGGGA +
Preference number: 4 (lower is better)
Translates to: EALVALVLNNLYKGDYYSVGVKI*HPGRQG
Trigger: TCCCTGTCGGCCCGGGTGCCAGATTTTCACGCCCAC...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCACACACAGACTCAAATaGGCACAGCACCAAATTATG +
Preference number: 4 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPTHRLK*AQHQIM
Trigger: CATAATTTGGTGCTGTGCCCATTTGAGTCTGTGTGT...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCGTGAGCTACTGCGCCTaGCCTATTATTATTATTTTT +
Preference number: 4 (lower is better)
Translates to: PYPPIPPQQFHQHRATALVSYCA*PIIIIF
Trigger: AAAAATAATAATAATAGGCCAGGCGCAGTAGCTCAC...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTATTGGTTAGTGAAAGCTaGGAGGAGCCTGTGGTTAGT +
Preference number: 4 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLLVSES*EEPVVS
Trigger: ACTAACCACAGGCTCCTCCCAGCTTTCACTAACCAA...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTAAGAGCTCTGCAAACTaGCAGAGAACTTGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCKSSAN*QRTWSG
Trigger: CCCAGACCAAGTTCTCTGCCAGTTTGCAGAGCTCTT...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATTCCCAGAGTGTGGAGTaGCTGTGTTCTTTCCCTATA +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHSQSVE*LCSFPI
Trigger: TATAGGGAAAGAACACAGCCACTCCACACTCTGGGA...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCTCTTCAGTTGGGAGCTaGCAGAAAACACAAGCCACG +
Preference number: 4 (lower is better)
Translates to: DIQMPACTFHLTKSKEVASSVGS*QKTQAT
Trigger: CGTGGCTTGTGTTTTCTGCCAGCTCCCAACTGAAGA...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCTGCGGTTCAGGGAAGTaGTGCAAGAAAATGCTTTTA +
Preference number: 4 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGCGSGK*CKKMLL
Trigger: TAAAAGCATTTTCTTGCACCACTTCCCTGAACCGCA...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAAAAAAGCATCCAACTGTaGGACAAGGCCTCAGTTTCC +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQKSIQL*DKASVS
Trigger: GGAAACTGAGGCCTTGTCTCACAGTTGGATGCTTTT...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
47% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTAATAAGGCAGCTGTATaGGACCCATGGAGAAACCCA +
Preference number: 4 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCNKAAV*DPWRNP
Trigger: TGGGTTTCTCCATGGGTCTCATACAGCTGCCTTATT...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR TCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGATCTGATTTCTGGTTATaGGGCCAAAGATCCCAAAGG +
Preference number: 4 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRSDFWL*GQRSQR
Trigger: CCTTTGGGATCTTTGGCCTCATAACCAGAAATCAGA...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCCCTCAGCAATGGTTGTaGGTCAGTTCTGTTCCAGAA +
Preference number: 4 (lower is better)
Translates to: DIQMPACTFHLTKSKEVAPQQWL*VSSVPE
Trigger: TTCTGGAACAGAACTGACTCACAACCATTGCTGAGG...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCGTAAACAATTATCTGTaGGAATCAGCGGTCACTTTG +
Preference number: 4 (lower is better)
Translates to: TLLAISPDTPTAISPTQSVNNYL*ESAVTL
Trigger: CAAAGTGACCGCTGATTCTCACAGATAATTGTTTAC...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATTTGGTGCCTAATAAATaGCTGTGCAGGAATGATGGG +
Preference number: 4 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHLVPNK*LCRNDG
Trigger: CCCATCATTCCTGCACAGTCATTTATTAGGCACCAA...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCGCACCAGTAAGGTATTaGGAGACAATTCCCCATGGT +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFAPVRY*ETIPHG
Trigger: ACCATGGGGAATTGTCTCTCAATACCTTACTGGTGC...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTGTACATACCTTCTCTTaGTCTCCATGCCTGGCGAAT +
Preference number: 4 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCVHTFS*SPCLAN
Trigger: ATTCGCCAGGCATGGAGAGCAAGAGAAGGTATGTAC...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACAAATTCTTCCAGCCTCTaGCCATTTCCACGTTGCAAT +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTNSSSL*PFPRCN
Trigger: ATTGCAACGTGGAAATGGGCAGAGGCTGGAAGAATT...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCATTGAATATAAGTCTTaGCATGATCCACCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGIEYKS*HDPPLP
Trigger: TGGAAGGGGTGGATCATGGCAAGACTTATATTCAAT...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAAGCTCAGTCTGCGTCTaGTGCTTTCTGTTTGATTCA +
Preference number: 4 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRSSVCV*CFLFDS
Trigger: TGAATCAAACAGAAAGCAGCAGACGCAGACTGAGCT...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAGGCATGTGCCACCATaGCCAGCTCATATTTTTAAT +
Preference number: 4 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTRHVPP*PAHIFN
Trigger: ATTAAAAATATGAGCTGGGCATGGTGGCACATGCCT...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGACAAACGTGAGCTACTaGGCCTGGCCTATTATTATT +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMTNVSY*AWPIII
Trigger: AATAATAATAGGCCAGGCGCAGTAGCTCACGTTTGT...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGGTGTGTGAGTCTCTATaGTGTGTACATGTGATGTTG +
Preference number: 4 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTEVCESL*CVHVML
Trigger: CAACATCACATGTACACAGCATAGAGACTCACACAC...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACAAGAATGAGTTCCAGGTaGCCAGTACAGCTAAGCAAA +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTRMSSR*PVQLSK
Trigger: TTTGCTTAGCTGTACTGGGCACCTGGAACTCATTCT...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGCCACCTGGGCAGGTTTaGTTGCAGCTTATTATAAAA +
Preference number: 4 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMPPGQV*LQLIIK
Trigger: TTTTATAATAAGCTGCAAGCAAACCTGCCCAGGTGG...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAACTCTCAATACTTTACTaGCCATATCCCCCGATACCC +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQLSILY*PYPPIP
Trigger: GGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAG...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
CDS-3UTR CCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCCTTACTGTCTCCACTTaGTCACTGTCATGTGACCTC +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFLTVST*SLSCDL
Trigger: GAGGTCACATGACAGTGACCAAGTGGAGACAGTAAG...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAATTAAAATCAAGGTATTaGCAGGACTGCATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQLKSRY*QDCILL
Trigger: AAGAAGAATGCAGTCCTGCCAATACCTTGATTTTAA...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTTTAAAATCAAGGTATTaGCAGGACTGCATTCTTCTT +
Preference number: 4 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPLKSRY*QDCILL
Trigger: AAGAAGAATGCAGTCCTGCCAATACCTTGATTTTAA...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCAGCAGCACTCTAATTTaGGCACCACAATCTATATTC +
Preference number: 4 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGSSTLI*APQSIF
Trigger: GAATATAGATTGTGGTGCCCAAATTAGAGTGCTGCT...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCCACCCTGCTGAGCCTTaGTGTCCTCAACTTTGTAAT +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFHPAEP*CPQLCN
Trigger: ATTACAAAGTTGAGGACACCAAGGCTCAGCAGGGTG...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTATCAGTTATTGAGCTGTaGAGTGCCTTCAACAAGGGT +
Preference number: 4 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLSVIEL*SAFNKG
Trigger: ACCCTTGTTGAAGGCACTCCACAGCTCAATAACTGA...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCGATGTGGATAAGGTCTaGTTCATTTCCCTCCCAGAC +
Preference number: 4 (lower is better)
Translates to: DIQMPACTFHLTKSKEVADVDKV*FISLPD
Trigger: GTCTGGGAGGGAAATGAACCAGACCTTATCCACATC...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTACGGTATTGGAAATCCTaGGGTTGGTTAGTGAAAGCT +
Preference number: 4 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLRYWKS*GWLVKA
Trigger: AGCTTTCACTAACCAACCCCAGGATTTCCAATACCG...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp TACCATCCCAGCCCCCAGTTCAAACATTTGTGTTCATaGCTCTTCGCCCTGATGGACTGTATGCTAAGAAAG +
Preference number: 4 (lower is better)
Translates to: YHPSPQFKHLCS*LFALMDCMLRK
Trigger: CTTTCTTAGCATACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGGATGGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp GACAATTCCCCATGGTTCTCTCCTATTTCTGCACACTaGCCAGTAGAGGCACTGGTTGCCCTTGTTCTAAAT +
Preference number: 4 (lower is better)
Translates to: DNSPWFSPISAH*PVEALVALVLN
Trigger: ATTTAGAACAAGGGCAACCAGTGCCTCTACTGGCAAGTGTGCAGAAATAGGAGAGAACCATGGGGAATTGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACAGTTGGCCTAATGTaGCTCTTACCTGCCCATAAA +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFTVGLM*LLPAHK
Trigger: TTTATGGGCAGGTAAGAGTCACATTAGGCCAACTGT...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAACTGAAATGCTCCCCATaGCAAGGCAAACTTCATATC +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQLKCSP*QGKLHI
Trigger: GATATGAAGTTTGCCTTGTCATGGGGAGCATTTCAG...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTCTCAACTTGAATGGCTaGCTGGGTCGGGCAGAAGGC +
Preference number: 4 (lower is better)
Translates to: EALVALVLNNLYKGDYYSLNLNG*LGRAEG
Trigger: GCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAG...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTGCTGGAGTGCAGTGGTaGAATCTCCGCTCACGGCAA +
Preference number: 4 (lower is better)
Translates to: EALVALVLNNLYKGDYYSAGVQW*NLRSRQ
Trigger: TTGCCGTGAGCGGAGATTGCACCACTGCACTCCAGC...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTTGCTCGAGCCAGGCTTaGCCAGGGAATTGTGTACGC +
Preference number: 4 (lower is better)
Translates to: EALVALVLNNLYKGDYYSCSSQA*PGNCVR
Trigger: GCGTACACAATTCCCTGGCCAAGCCTGGCTCGAGCA...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGACTTGAGTCTTCGAAGTaGCCATTGCTCAACTTGAAT +
Preference number: 4 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRLESSK*PLLNLN
Trigger: ATTCAAGTTGAGCAATGGCCACTTCGAAGACTCAAG...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp TGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTAGCAGCACTCTAATTTaGGCACCACAATCTATATTC +
Preference number: 4 (lower is better)
Translates to: WGNHRTLGNAIRTWALESSSTLI*APQSIF
Trigger: GAATATAGATTGTGGTGCCCAAATTAGAGTGCTGCT...ACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCCTATCAGAAGAGAGGTaGTTAAGGCAATTTATCATG +
Preference number: 4 (lower is better)
Translates to: GNHRTLGNAIRTWALESALSEER*LRQFIM
Trigger: CATGATAAATTGCCTTAACCACCTCTCTTCTGATAG...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCTCTCTGATAGTCAAATaGACACCAATGGCAGCCTCA +
Preference number: 4 (lower is better)
Translates to: DIQMPACTFHLTKSKEVASLIVK*TPMAAS
Trigger: TGAGGCTGCCATTGGTGTCCATTTGACTATCAGAGA...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCGGCCTGGCTTACAGTTaGTGCCTAATAAATGACTGT +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFGLAYS*CLINDC
Trigger: ACAGTCATTTATTAGGCACCAACTGTAAGCCAGGCC...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACATGCGGTTCAGGGAAGTaGTGCAAGAAAATGCTTTTA +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTCGSGK*CKKMLL
Trigger: TAAAAGCATTTTCTTGCACCACTTCCCTGAACCGCA...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp CTTGAGAATATGATAGACTATGATAGACTAACTTGTTaGCTTCAAAGTCGGATAAGCCGGGCGCGGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LENMIDYDRLTC*LQSRISRARWL
Trigger: GAGCCACCGCGCCCGGCTTATCCGACTTTGAAGCAAACAAGTTAGTCTATCATAGTCTATCATATTCTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp CGTATACTAAAGATAACATCTCCCACCTGGGCAGGTTaGCTTGCAGCTTATTATAAAAGACGTGGGTCCCCT +
Preference number: 4 (lower is better)
Translates to: RILKITSPTWAG*LAAYYKRRGSP
Trigger: AGGGGACCCACGTCTTTTATAATAAGCTGCAAGCAAACCTGCCCAGGTGGGAGATGTTATCTTTAGTATACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCCATGCACATTCCACTTaGCTAAGAGTAAAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: DIQMPACTFHLTKSKEVAHAHST*LRVKRL
Trigger: CAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATG...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCATTCAGATGCCAGCATaGACATTCCACTTGACTAAG +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFIQMPA*TFHLTK
Trigger: CTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAAT...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR GCA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTAAGTGGTGCAAGAAAATaGTTTTACTCTGTCTACTGC +
Preference number: 4 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLSGARK*FYSVYC
Trigger: GCAGTAGACAGAGTAAAAGCATTTTCTTGCACCACT...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAAGAAAAGAATCGAAGGTaGATAGGGAAAGACATGCTG +
Preference number: 4 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQEKNRR*IGKDML
Trigger: CAGCATGTCTTTCCCTATCCACCTTCGATTCTTTTC...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CCA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACTCAACTTTGTAATGTaGGGACAACTAAAAACCCCA +
Preference number: 4 (lower is better)
Translates to: LNTLLAISPDTPTAISPTLNFVM*GQLKTP
Trigger: TGGGGTTTTTAGTTGTCCCCACATTACAAAGTTGAG...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp GAACTCCTTATGAGTAGGGACCGTGTCAATTTTTCTTaGGTACCACAGTATGACAGTGTAGTCCTGGCAATC +
Preference number: 4 (lower is better)
Translates to: ELLMSRDRVNFS*VPQYDSVVLAI
Trigger: GATTGCCAGGACTACACTGTCATACTGTGGTACCAAAGAAAAATTGACACGGTCCCTACTCATAAGGAGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp GGTAGTATCTCCCTCCAGAGCAAAAGGCAGATTTTATaGTCCCGTATACTAAAGATAACATCTCCCACCTGG +
Preference number: 4 (lower is better)
Translates to: GSISLQSKRQIL*SRILKITSPTW
Trigger: CCAGGTGGGAGATGTTATCTTTAGTATACGGGACAATAAAATCTGCCTTTTGCTCTGGAGGGAGATACTACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTATACACTGTAGTTGCTaGGAGGTCAAGGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: EALVALVLNNLYKGDYYSIHCSC*EVKGWV
Trigger: GACCCAGCCCTTGACCTCTCAGCAACTACAGTGTAT...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTACCCTGAGATGCTGCTaGAGACAGCAAGAGCCAAAG +
Preference number: 4 (lower is better)
Translates to: EALVALVLNNLYKGDYYSTLRCC*RQQEPK
Trigger: CTTTGGCTCTTGCTGTCTTCAGCAGCATCTCAGGGT...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCCTCAACTTTGTAATGTaGGGACAACTAAAAACCCCA +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFLNFVM*GQLKTP
Trigger: TGGGGTTTTTAGTTGTCCCCACATTACAAAGTTGAG...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp GACCTGCAAGTCATGGACAAAACATTAGGTCACCATTaGTTAGTCTCTCAATACTTTACTGGCCATATCCCC +
Preference number: 4 (lower is better)
Translates to: DLQVMDKTLGHH*LVSQYFTGHIP
Trigger: GGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAATGGTGACCTAATGTTTTGTCCATGACTTGCAGGTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
3UTR CAA 72 bp ACTCTGTCTACTGCCGTTACTGTAAACAATAATCTGTaGTCTGTTTCTGAACCCAGAGTTCTGTGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: TLSTAVTVNNNL*SVSEPRVLCLL
Trigger: CAGAAGGCACAGAACTCTGGGTTCAGAAACAGACAACAGATTATTGTTTACAGTAACGGCAGTAGACAGAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTCCACATGGTCACATTTaGATCTCCAGACGCCCCAAT +
Preference number: 4 (lower is better)
Translates to: EALVALVLNNLYKGDYYSPHGHI*ISRRPN
Trigger: ATTGGGGCGTCTGGAGATGCAAATGTGACCATGTGG...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTATCCAAGGGAGGCCCTaGGTGGACACCTATGATTAT +
Preference number: 4 (lower is better)
Translates to: EALVALVLNNLYKGDYYSIQGRP*VDTYDY
Trigger: ATAATCATAGGTGTCCACGCAGGGCCTCCCTTGGAT...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCCCAGAAATACATCGATaGCTATATAGTGTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFPEIHR*LYSVVS
Trigger: AGAGACAACACTATATAGGCATCGATGTATTTCTGG...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTTGGAGCTTGAAGAAGTaGATTGTTTGCACCGCCTGG +
Preference number: 4 (lower is better)
Translates to: EALVALVLNNLYKGDYYSWSLKK*IVCTAW
Trigger: CCAGGCGGTGCAAACAATCCACTTCTTCAAGCTCCA...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTGTGAGCTACTGCGCCTaGCCTATTATTATTATTTTT +
Preference number: 4 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCVSYCA*PIIIIF
Trigger: AAAAATAATAATAATAGGCCAGGCGCAGTAGCTCAC...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTGGCTCAGTCTTCAGTTaGGAGCTGGCAGAAAACACA +
Preference number: 4 (lower is better)
Translates to: EALVALVLNNLYKGDYYSGSVFS*ELAENT
Trigger: TGTGTTTTCTGCCAGCTCCCAACTGAAGACTGAGCC...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
3UTR CAA 72 bp ATTTGGGAAGTAATGCCAAGAAGCACCAGTAAGGTATaGAGAGACAATTCCCCATGGTTCTCTCCTATTTCT +
Preference number: 4 (lower is better)
Translates to: IWEVMPRSTSKV*RDNSPWFSPIS
Trigger: AGAAATAGGAGAGAACCATGGGGAATTGTCTCTCAATACCTTACTGGTGCTTCTTGGCATTACTTCCCAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR TCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTCTGCAGAAACCACTCTaGGACAAGCATCCAAATGCA +
Preference number: 4 (lower is better)
Translates to: EALVALVLNNLYKGDYYSLQKPL*DKHPNA
Trigger: TGCATTTGGATGCTTGTCTCAGAGTGGTTTCTGCAG...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTAAAAATGCCACAATGTaGCAAGCCAGGCACATCCCA +
Preference number: 4 (lower is better)
Translates to: EALVALVLNNLYKGDYYSKNATM*QARHIP
Trigger: TGGGATGTGCCTGGCTTGGCACATTGTGGCATTTTT...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR GCA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTCCACCTGGGCAGGTTTaGTTGCAGCTTATTATAAAA +
Preference number: 4 (lower is better)
Translates to: EALVALVLNNLYKGDYYSPPGQV*LQLIIK
Trigger: TTTTATAATAAGCTGCAAGCAAACCTGCCCAGGTGG...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS CCA 90 bp AAAGGCTGCCCCACCCACCCACCAGCCGGAGAAGCTGCCCCGAACTaGACGCCCGGACGTGCGTGGCCCGTCGCGCGCTCCCTCGGACGC +
Preference number: 5 (lower is better)
Translates to: KGCPTHPPAGEAAPN*TPGRAWPVARSLGR
Trigger: GCGTCCGAGGGAGCGCGCGACGGGCCACGCACGTCCGGGCGTCCAGTTCGGGGCAGCTTCTCCGGCTGGTGGGTGGGTGGGGCAGCCTTT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CAA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCCCAGTGGCTGCAGGCTaGAGGCCCCGCCTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLPVAAG*RPRLPV
Trigger: GACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGG...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGCAGCCCTGGAAACCCTaGCTCCTGCTCCAAGGGTCC +
Preference number: 5 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLQPWKP*LLLQGS
Trigger: GGACCCTTGGAGCAGGAGCAAGGGTTTCCAGGGCTG...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS TCA 90 bp AGCCATGCTATGGCCCAGACCTCCGGATATGCAGGAACCGGGGCCTaGGGAGACAGGGACAGGGGCTGGTTACCACCTGGGCCTCAGGGA +
Preference number: 5 (lower is better)
Translates to: SHAMAQTSGYAGTGA*GDRDRGWLPPGPQG
Trigger: TCCCTGAGGCCCAGGTGGTAACCAGCCCCTGTCCCTGTCTCCTCAGGCCCCGGTTCCTGCATATCCGGAGGTCTGGGCCATAGCATGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS GCA 90 bp TCTGGTCAGGCTGGCGGCACTGACAAGGCATCCACAGGGCAGCCATaGTATGGCCCAGACCTCCGGATATGCAGGAACCGGGGCCTGAGG +
Preference number: 5 (lower is better)
Translates to: SGQAGGTDKASTGQP*YGPDLRICRNRGLR
Trigger: CCTCAGGCCCCGGTTCCTGCATATCCGGAGGTCTGGGCCATAGCATGGCTGCCCTGTGGATGCCTTGTCAGTGCCGCCAGCCTGACCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS-3UTR CAA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGCGTGGCTCCCCTGCGTaGTTTGCAGGAGAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGRGSPA*FAGEVW
Trigger: CCAGACCTCTCCTGCAAACAACGCAGGGGAGCCACG...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS CCA 90 bp ATCACAGCAGGGATTTGGCTCCAGCCCAAGGGGATTGCTCCGAGCTaGCGTTTAGGAACCAGGCCGGGAGGTGTGTGGGCGGAGCCCAGT +
Preference number: 5 (lower is better)
Translates to: ITAGIWLQPKGIAPS*RLGTRPGGVWAEPS
Trigger: ACTGGGCTCCGCCCACACACCTCCCGGCCTGGTTCCTAAACGCCAGCTCGGAGCAATCCCCTTGGGCTGGAGCCAAATCCCTGCTGTGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434410.5
CDS-3UTR CAA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGGGTTGCCAGTTGGCGTaGGCCCTGGACTCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGGCQLA*ALDSEE
Trigger: CTCTTCTGAGTCCAGGGCCAACGCCAACTGGCAACC...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGGGAGCCTTGCCCTGGTaGTGCACCCCCTTCGCCCTC +
Preference number: 5 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWGALPW*CTPFAL
Trigger: GAGGGCGAAGGGGGTGCACAACCAGGGCAAGGCTCC...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCCCAGTGGCTGCAGGCTaGAGGCCCCGCCTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: TLGNAIRTWALESAIHLPPVAAG*RPRLPV
Trigger: GACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGG...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGTCCAGTTCAGGGGGCTaGTCCAGGGCAGAAGGTCAT +
Preference number: 5 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLSSSGG*SRAEGH
Trigger: ATGACCTTCTGCCCTGGACAAGCCCCCTGAACTGGA...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GAGCCCCTGGAAGTCCCACTCTCCAAGGATGTACTGCACCGGCATCCTCTGCAAGCCCTTCTGGGCTGCTaGGGCTGGCGAGGTGAGGGT +
Preference number: 5 (lower is better)
Translates to: EPLEVPLSKDVLHRHPLQALLGC*GWRGEG
Trigger: ACCCTCACCTCGCCAGCCCAAGCAGCCCAGAAGGGC...TTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAGGGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS GCA 90 bp TGCCACCCCGAGTCCACCAGACTCCAGAAGCGGCTCTTGCACCAGTaGGCCGTCCCAGGAGCCAAGGCCCGAAGTCAGAAGTGTAAACTC +
Preference number: 5 (lower is better)
Translates to: CHPESTRLQKRLLHQ*AVPGAKARSQKCKL
Trigger: GAGTTTACACTTCTGACTTCGGGCCTTGGCTCCTGGGACGGCGCACTGGTGCAAGAGCCGCTTCTGGAGTCTGGTGGACTCGGGGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424388.1
CDS GCA 90 bp AGGCAAGACACGAACCCGAGTCCACCAGACTCCAGAAGCGGCTCTTaGACCAGTGCGCCGTCCCAGGAGCCAAGGCCCGAAGTCAGAAGT +
Preference number: 5 (lower is better)
Translates to: RQDTNPSPPDSRSGS*TSAPSQEPRPEVRS
Trigger: ACTTCTGACTTCGGGCCTTGGCTCCTGGGACGGCGCACTGGTGCAAGAGCCGCTTCTGGAGTCTGGTGGACTCGGGTTCGTGTCTTGCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS GCA 90 bp CTGGGCCCAAGGCCCCCAACCCAGGTGTCTTATGTGGATAATGCCTaGCCAGCACTGGTCTGGAGGCCCAACCCTCTCATCATCTGGGCC +
Preference number: 5 (lower is better)
Translates to: LGPRPPTQVSYVDNA*PALVWRPNPLIIWA
Trigger: GGCCCAGATGATGAGAGGGTTGGGCCTCCAGACCAGTGCTGGGCAGGCATTATCCACATAAGACACCTGGGTTGGGGGCCTTGGGCCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS CCA 90 bp TGGCTGGCTCACTGGGCCCAAGGCCCCCAACCCAGGTGTCTTATGTaGATAATGCCTGCCCAGCACTGGTCTGGAGGCCCAACCCTCTCA +
Preference number: 5 (lower is better)
Translates to: WLAHWAQGPQPRCLM*IMPAQHWSGGPTLS
Trigger: TGAGAGGGTTGGGCCTCCAGACCAGTGCTGGGCAGGCATTATCCACATAAGACACCTGGGTTGGGGGCCTTGGGCCCAGTGAGCCAGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS-3UTR CAA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCAACCCTGGAGCCCACGTaGGCTGTGGGGCACCTAACT +
Preference number: 5 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPTLEPT*AVGHLT
Trigger: AGTTAGGTGCCCCACAGCCAACGTGGGCTCCAGGGT...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp ATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCTCCACGGGGCCAGCTTaGCCTCGGGCACAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: IPRYPHSNFTNTEQLPSASTGPA*PRAQCS
Trigger: GGAGCACTGTGCCCGAGGCAAAGCTGGCCCCGTGGA...GGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS GCA 90 bp CACGAACCCGAGTCCACCAGACTCCAGAAGCGGCTCTTGCACCAGTaGGCCGTCCCAGGAGCCAAGGCCCGAAGTCAGAAGTGTAAACTC +
Preference number: 5 (lower is better)
Translates to: HEPESTRLQKRLLHQ*AVPGAKARSQKCKL
Trigger: GAGTTTACACTTCTGACTTCGGGCCTTGGCTCCTGGGACGGCGCACTGGTGCAAGAGCCGCTTCTGGAGTCTGGTGGACTCGGGTTCGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS-3UTR CAA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTGGAGCCTTGCCCTGGTaGTGCACCCCCTTCGCCCTC +
Preference number: 5 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPGALPW*CTPFAL
Trigger: GAGGGCGAAGGGGGTGCACAACCAGGGCAAGGCTCC...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp ATGGGTCAGAGAGATAGCAGCTTCCCGCTTATCCACAGCAATGACTCGGCTCTGCCAGTGGCTGCAGGCTaGAGGCCCCGCCTGCCAGTC +
Preference number: 5 (lower is better)
Translates to: MGQRDSSFPLIHSNDSALPVAAG*RPRLPV
Trigger: GACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGG...CAGAGCCGAGTCATTGCTGTGGATAAGCGGGAAGCTGCTATCTCTCTGACCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CAA 90 bp GGCCCAATCAAGCCAGTGGCTGCAGGCTTGAGGCCCCGCCTGCCAGTCCTCTTGCTCTTCCTCCAGCAATaGCATCACTCTGACCTCTGC +
Preference number: 5 (lower is better)
Translates to: GPIKPVAAGLRPRLPVLLLFLQQ*HHSDLC
Trigger: GCAGAGGTCAGAGTGATGCAATTGCTGGAGGAAGAG...CAAGAGGACTGGCAGGCGGGGCCTCAAGCCTGCAGCCACTGGCTTGATTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCACCCTGGAGCCCACGTaGGCTGTGGGGCACCTAACT +
Preference number: 5 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGTLEPT*AVGHLT
Trigger: AGTTAGGTGCCCCACAGCCAACGTGGGCTCCAGGGT...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTAGTTCCCAGGCGGGTTaGCTGGGAGAATCACCAGCC +
Preference number: 5 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSSSQAG*LGESPA
Trigger: GGCTGGTGATTCTCCCAGCAAACCCGCCTGGGAACT...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS GCA 90 bp CCATCTGCACTATGGAGAATGGTACCGGCCAGGTCTCCAGGCGGTTaGAGTCGAAACACCCCGTTCCGATCCCCACCTCCCATGCATACC +
Preference number: 5 (lower is better)
Translates to: PSALWRMVPARSPGG*SRNTPFRSPPPMHT
Trigger: GGTATGCATGGGAGGTGGGGATCGGAACGGGGTGTTTCGACTGCAACCGCCTGGAGACCTGGCCGGTACCATTCTCCATAGTGCAGATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000482974.1
CDS-3UTR CAA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCGGCAGAAGGAAACCCTaGCCCCAGTGCTACCTGGGA +
Preference number: 5 (lower is better)
Translates to: SLDSISSMSSSHSACKCSGRRKP*PQCYLG
Trigger: TCCCAGGTAGCACTGGGGCAAGGGTTTCCTTCTGCC...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGAGAGGATGCTGCCTATaGGACCATACTGCCCATCAG +
Preference number: 5 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGRGCCL*DHTAHQ
Trigger: CTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GAGCCCCTGGAAGTCCCACTCTCCAAGGATGTACTGCACCGGCATCCTCTGCAAGGTTGCCAGTTGGCGTaGGCCCTGGACTCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: EPLEVPLSKDVLHRHPLQGCQLA*ALDSEE
Trigger: CTCTTCTGAGTCCAGGGCCAACGCCAACTGGCAACC...TTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAGGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CAA 90 bp CCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCGCCTGCCAGTCCTCTaGGCTTGGACCTTTTCCTCA +
Preference number: 5 (lower is better)
Translates to: PQHGTSGPPLPAPTQPVPRLPVL*AWTFSS
Trigger: TGAGGAAAAGGTCCAAGCCAAGAGGACTGGCAGGCG...AGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CAA 90 bp CCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTTGGCCATTGCTCAACTaGAATGGCTGCCTGGGTCGG +
Preference number: 5 (lower is better)
Translates to: PQHGTSGPPLPAPTQPVPWPLLN*NGCLGR
Trigger: CCGACCCAGGCAGCCATTCAAGTTGAGCAATGGCCA...AGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CAA 90 bp CTGGAAGTCCCACTCTCCAAGGATGTACTGCACCGGCATCCTCTGCAATCGACGCTCCTGGTGTGGCTGTaGCGCAGGGATCAGGTGCAC +
Preference number: 5 (lower is better)
Translates to: LEVPLSKDVLHRHPLQSTLLVWL*RRDQVH
Trigger: GTGCACCTGATCCCTGCGCAACAGCCACACCAGGAG...CGTCGATTGCAGAGGATGCCGGTGCAGTACATCCTTGGAGAGTGGGACTTCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CAA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCACAGACCTGCCTCACCTaGCTGTGTGACACTGGGCAA +
Preference number: 5 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPQTCLT*LCDTGQ
Trigger: TTGCCCAGTGTCACACAGCAAGGTGAGGCAGGTCTG...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTGGAGGAGAAGTAGGGTaGGGGGCAGGTGGTGACTCT +
Preference number: 5 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSGGEVG*GAGGDS
Trigger: AGAGTCACCACCTGCCCCCAACCCTACTTCTCCTCC...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp AACGTGGATGTGCGACCCAGGAACTGTGCAGCAAAGACCTCCAGACCCTCCCCTGCGCACAGGACCTTGTaGGGCCTTCGGAGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: NVDVRPRNCAAKTSRPSPAHRTL*GLRRRS
Trigger: ACTTCTCCTCCGAAGGCCCAACAAGGTCCTGTGCGC...AGGGGAGGGTCTGGAGGTCTTTGCTGCACAGTTCCTGGGTCGCACATCCACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTCAGCCTCCTCTGCCCTaGGAGGGCGCACAGGACCTT +
Preference number: 5 (lower is better)
Translates to: PIPPQQFHQHRATALSHSQPPLP*EGAQDL
Trigger: AAGGTCCTGTGCGCCCTCCAAGGGCAGAGGAGGCTG...AGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTCAGCCTCCTCTGCCCTaGGAGGGCGCACAGGACCTT +
Preference number: 5 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPQPPLP*EGAQDL
Trigger: AAGGTCCTGTGCGCCCTCCAAGGGCAGAGGAGGCTG...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCGCTCCCCTGCGTTGTTaGCAGGAGAGGTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: SLDSISSMSSSHSACKCSAPLRC*QERSGG
Trigger: TCCTCCAGACCTCTCCTGCAAACAACGCAGGGGAGC...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp ACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTCAGGTCTCCAGGCGGTaGCAGTCGAAACACCCCGTT +
Preference number: 5 (lower is better)
Translates to: TAWDLWATSSSTHSTSSSQVSRR*QSKHPV
Trigger: AACGGGGTGTTTCGACTGCAACCGCCTGGAGACCTG...AGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424388.1
CDS GCA 90 bp CCCCTGGACCCAGCTGGGTGGAGATGGAGAGGTCACAAGCTCTGGTaGCCCAAAATGGCTCTGGTCCTCAGATATAGTTGGTTGCCACCC +
Preference number: 5 (lower is better)
Translates to: PLDPAGWRWRGHKLW*PKMALVLRYSWLPP
Trigger: GGGTGGCAACCAACTATATCTGAGGACCAGAGCCATTTTGGGGCACCAGAGCTTGTGACCTCTCCATCTCCACCCAGCTGGGTCCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000232854.9
ENST00000424388.1
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
ENST00000482974.1
CDS CCA 90 bp TGCTTTATGATGTCAGCTGCTGAGGTGAGTGCTGAGAGTGGCCCCTaGACCCAGCTGGGTGGAGATGGAGAGGTCACAAGCTCTGGTGCC +
Preference number: 5 (lower is better)
Translates to: CFMMSAAEVSAESGP*TQLGGDGEVTSSGA
Trigger: GGCACCAGAGCTTGTGACCTCTCCATCTCCACCCAGCTGGGTCCAGGGGCCACTCTCAGCACTCACCTCAGCAGCTGACATCATAAAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000232854.9
ENST00000424388.1
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
ENST00000482974.1
CDS CCA 90 bp TCCCGGGCCTCAGGGATACCCCTCTTCTCAAAGACCCCAGTCCAGTaGCTGACCAGTTCTATGGCACTGGATAACCCAGCCAGAGGTGGT +
Preference number: 5 (lower is better)
Translates to: SRASGIPLFSKTPVQ*LTSSMALDNPARGG
Trigger: ACCACCTCTGGCTGGGTTATCCAGTGCCATAGAACTGGTCAGCCACTGGACTGGGGTCTTTGAGAAGAGGGGTATCCCTGAGGCCCGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000232854.9
ENST00000424388.1
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
ENST00000482974.1
CDS-3UTR CAA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTCAAGCTCCGGGTGCCTaGGGTCCACTTCTAAGAAGA +
Preference number: 5 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSQAPGA*GPLLRR
Trigger: TCTTCTTAGAAGTGGACCCAAGGCACCCGGAGCTTG...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCTTTCTGGGCAGAAAGTaGTGCCCGAGGCCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSFLGRK*CPRPAP
Trigger: AGGAGCCGGCCTCGGGCACAACTTTCTGCCCAGAAA...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp TCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCTGAGCCCCTTTCTGGGCAGAAAGTaGTGCCCGAGGCCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: SVSGRGINTGGTILRLSPFLGRK*CPRPAP
Trigger: AGGAGCCGGCCTCGGGCACAACTTTCTGCCCAGAAA...GGGGCTCAGCCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CAA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTGGGCAGATTCTGGGATaGAAATCCAGGCTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSGQILG*KSRLVW
Trigger: CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCC...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGGCCTGCAAGTGCTCCTaGACATATGCTGGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: LGHLFQHPLNQFLCFWPRACKCS*TYAGGG
Trigger: ACCACCACCAGCATATGTCAAGGAGCACTTGCAGGC...CCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CAA 90 bp CCACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTGAAGAAGTGGATTGTTaGCACCGCCTGGGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: PQHGTSGPPLPAPTQPVPEEVDC*HRLGKG
Trigger: CCCTTTGCCCAGGCGGTGCAAACAATCCACTTCTTC...AGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CAA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCCAGCCCTGGAAACCCTaGCTCCTGCTCCAAGGGTCC +
Preference number: 5 (lower is better)
Translates to: PYPPIPPQQFHQHRATALQPWKP*LLLQGS
Trigger: GGACCCTTGGAGCAGGAGCAAGGGTTTCCAGGGCTG...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCCCCACATGGTCACATTaGCATCTCCAGACGCCCCAA +
Preference number: 5 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLPTWSH*HLQTPQ
Trigger: TTGGGGCGTCTGGAGATGCAAATGTGACCATGTGGG...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCATGTCCTCGCCTGACCTaGTATTCTGCCCCACCTAGT +
Preference number: 5 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPCPRLT*YSAPPS
Trigger: ACTAGGTGGGGCAGAATACAAGGTCAGGCGAGGACA...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCTGGACATGGACCCAGTaGGCCAGGTGCAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: SVHATHIRSTSESGFSGSWTWTQ*ARCSGS
Trigger: TGAGCCACTGCACCTGGCCAACTGGGTCCATGTCCA...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTCTGCGCTCCCATGACTaGGAGGCAGTGGTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: PIPPQQFHQHRATALSHSLRSHD*EAVVGP
Trigger: AGGCCCAACCACTGCCTCCAAGTCATGGGAGCGCAG...AGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp TCAGTCCACGCCACCCATATCCGGAGTACATCAGAGTCTGGGTTCAGTGGCAGCAGTTCCCAGGCGGGTTaGCTGGGAGAATCACCAGCC +
Preference number: 5 (lower is better)
Translates to: SVHATHIRSTSESGFSGSSSQAG*LGESPA
Trigger: GGCTGGTGATTCTCCCAGCAAACCCGCCTGGGAACT...GCTGCCACTGAACCCAGACTCTGATGTACTCCGGATATGGGTGGCGTGGACTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTGAGGGCGCACAGGACCTaGTTGGGCCTTCGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: PPQQFHQHRATALSHSDVRAHRT*LGLRRR
Trigger: TCTCCTCCGAAGGCCCAACAAGGTCCTGTGCGCCCT...CACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGAAGGGCGCACAGGACCTaGTTGGGCCTTCGGAGGAGA +
Preference number: 5 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGRAHRT*LGLRRR
Trigger: TCTCCTCCGAAGGCCCAACAAGGTCCTGTGCGCCCT...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCTCCACGGGGCCAGCTTaGCCTCGGGCACAGTGCTCC +
Preference number: 5 (lower is better)
Translates to: TLLAISPDTPTAISPTQSSTGPA*PRAQCS
Trigger: GGAGCACTGTGCCCGAGGCAAAGCTGGCCCCGTGGA...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCAGGCCTGGCACCCAGTaGATGGTGCTCAGGGTACAG +
Preference number: 5 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSRPGTQ*MVLRVQ
Trigger: CTGTACCCTGAGCACCATCAACTGGGTGCCAGGCCT...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCGAGGTGGCAGATCACTaGAGGTCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLEVADH*RSGVRD
Trigger: GTCTCGAACTCCTGACCTCAAGTGATCTGCCACCTC...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGGCCGCTCAGATATAGTTGGTaGCCACCCCGAGTCCACCAG +
Preference number: 5 (lower is better)
Translates to: PLGHLFQHPLNQFLCFWPLRYSW*PPRVHQ
Trigger: CTGGTGGACTCGGGGTGGCAACCAACTATATCTGAG...CGGCCAGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424388.1
CDS CCA 90 bp GGTGGAGATGGAGAGGTCACAAGCTCTGGTGCCCCAAAATGGCTCTaGTCCTCAGATATAGTTGGTTGCCACCCAGCCGGAGAAGCTGCC +
Preference number: 5 (lower is better)
Translates to: GGDGEVTSSGAPKWL*SSDIVGCHPAGEAA
Trigger: GGCAGCTTCTCCGGCTGGGTGGCAACCAACTATATCTGAGGACCAGAGCCATTTTGGGGCACCAGAGCTTGTGACCTCTCCATCTCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455834.5
CDS-3UTR CAA 90 bp CCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGGCAGAAGGAAACCCTaGCCCCAGTGCTACCTGGGA +
Preference number: 5 (lower is better)
Translates to: PIPPQQFHQHRATALSHSGRRKP*PQCYLG
Trigger: TCCCAGGTAGCACTGGGGCAAGGGTTTCCTTCTGCC...AGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGAGGCTTGGCCAGGGAATaGTGTACGCATGCACCCAGG +
Preference number: 5 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGGLARE*CTHAPR
Trigger: CCTGGGTGCATGCGTACACAATTCCCTGGCCAAGCC...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAAGTGCTCGAGCCAGGCTaGGCCAGGGAATTGTGTACG +
Preference number: 5 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQVLEPG*ARELCT
Trigger: CGTACACAATTCCCTGGCCAAGCCTGGCTCGAGCAC...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCGAAGAAGTGGATTGTTaGCACCGCCTGGGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: SLDSISSMSSSHSACKCSEEVDC*HRLGKG
Trigger: CCCTTTGCCCAGGCGGTGCAAACAATCCACTTCTTC...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCTATAGGACCCTCCACTaGGTATCATCTCCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLYRTLH*VSSPWC
Trigger: GCACCAGGGAGATGATACCAAGTGGAGGGTCCTATA...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCACAGAACTCCAGGCTTTaGTCCAGACTGTCCCTACTG +
Preference number: 5 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPQNSRL*SRLSLL
Trigger: CAGTAGGGACAGTCTGGACAAAAGCCTGGAGTTCTG...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTACTCTACCTCAAGGGTaGCCTTTGGACTGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSTLPQG*PLDCVP
Trigger: GGGGACACAGTCCAAAGGCAACCCTTGAGGTAGAGT...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGAGATGCCCGGTACTGTaGTCGCCAGCACTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: GETGQMTASVTPSPTLGRRCPVL*SPALRS
Trigger: AGACCTGAGTGCTGGCGACAACAGTACCGGGCATCT...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAATCCCTGGGATGGACATGGACCCAGTaGGCCAGGTGCAGTGGCTCA +
Preference number: 5 (lower is better)
Translates to: GNCVRMHPGQWRTNQSLGWTWTQ*ARCSGS
Trigger: TGAGCCACTGCACCTGGCCAACTGGGTCCATGTCCA...TCCCAGGGATTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAAGGAGGAGAAGTAGGGTaGGGGGCAGGTGGTGACTCT +
Preference number: 5 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQGGEVG*GAGGDS
Trigger: AGAGTCACCACCTGCCCCCAACCCTACTTCTCCTCC...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTGCTCCCCTGCGTTGTTaGCAGGAGAGGTCTGGAGGA +
Preference number: 5 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPAPLRC*QERSGG
Trigger: TCCTCCAGACCTCTCCTGCAAACAACGCAGGGGAGC...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTCAGCTACGCACCGCATaGTTAACGACCCAGATGAGG +
Preference number: 5 (lower is better)
Translates to: AWDLWATSSSTHSTSSSVQLRTA*LTTQMR
Trigger: CCTCATCTGGGTCGTTAACAATGCGGTGCGTAGCTG...AACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000424388.1
CDS CCA 90 bp TTGGTTGCCACCCTGCCGGTCTTCCTTAAAATCACAGCAGGGATTTaGCTCCAGCCCAAGGGGATTGCTCCGAGCTGGCGTTTAGGAACC +
Preference number: 5 (lower is better)
Translates to: LVATLPVFLKITAGI*LQPKGIAPSWRLGT
Trigger: GGTTCCTAAACGCCAGCTCGGAGCAATCCCCTTGGGCTGGAGCCAAATCCCTGCTGTGATTTTAAGGAAGACCGGCAGGGTGGCAACCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434410.5
CDS CCA 90 bp CAGCTGGGTGGAGATGGAGAGGTCACAAGCTCTGGTGCCCCAAAATaGCTCTGGTCCTCAGATATAGTTGGTTGCCACCCTGCCGGTCTT +
Preference number: 5 (lower is better)
Translates to: QLGGDGEVTSSGAPK*LWSSDIVGCHPAGL
Trigger: AAGACCGGCAGGGTGGCAACCAACTATATCTGAGGACCAGAGCCATTTTGGGGCACCAGAGCTTGTGACCTCTCCATCTCCACCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434410.5
CDS CCA 90 bp CAGCTGGGTGGAGATGGAGAGGTCACAAGCTCTGGTGCCCCAAAATaGCTCTGGTCCTCAGATATAGTTGGTTGCCACCCAGCCGGAGAA +
Preference number: 5 (lower is better)
Translates to: QLGGDGEVTSSGAPK*LWSSDIVGCHPAGE
Trigger: TTCTCCGGCTGGGTGGCAACCAACTATATCTGAGGACCAGAGCCATTTTGGGGCACCAGAGCTTGTGACCTCTCCATCTCCACCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455834.5
CDS CCA 90 bp CAGCTGGGTGGAGATGGAGAGGTCACAAGCTCTGGTGCCCCAAAATaGCTCTGGTCCTCAGATATAGTTGGTTGCCACCCTGGGAGTGAG +
Preference number: 5 (lower is better)
Translates to: QLGGDGEVTSSGAPK*LWSSDIVGCHPGSE
Trigger: CTCACTCCCAGGGTGGCAACCAACTATATCTGAGGACCAGAGCCATTTTGGGGCACCAGAGCTTGTGACCTCTCCATCTCCACCCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS-3UTR CAA 90 bp ACCAGTTCCTCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGGTGCTCGAGCCAGGCTaGGCCAGGGAATTGTGTACG +
Preference number: 5 (lower is better)
Translates to: TSSSVSGRGINTGGTILRVLEPG*ARELCT
Trigger: CGTACACAATTCCCTGGCCAAGCCTGGCTCGAGCAC...CCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGAGGAACTGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CAA 90 bp GCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTGGACACATGGGTTATTaGAAACCCCAGGGGGTCAAC +
Preference number: 5 (lower is better)
Translates to: AWDLWATSSSTHSTSSSVGHMGY*KPQGVN
Trigger: GTTGACCCCCTGGGGTTTCAAATAACCCATGTGTCC...AACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CAA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTCTAAGAGTAAAGAGGTaGCCAGTTGGCGTTGGCCCT +
Preference number: 5 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSLRVKR*PVGVGP
Trigger: AGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAG...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTGGGCAGATTCTGGGATaGAAATCCAGGCTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATGQILG*KSRLVW
Trigger: CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCC...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp AGAGGATGCTGCCTATTGGACCATACTGCCCATCAGACCATACTGCCAGGCCCTTTCGAGTCTCTGGCTTaGGCCTCAGGAGCAAGGGAG +
Preference number: 5 (lower is better)
Translates to: RGCCLLDHTAHQTILPGPFESLA*ASGARE
Trigger: CTCCCTTGCTCCTGAGGCCAAAGCCAGAGACTCGAA...AGGGCCTGGCAGTATGGTCTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCCAAGACCTCAGGGGCTaGCACAGCCTGGACTCCATC +
Preference number: 5 (lower is better)
Translates to: GSSLQLNERGCATQELCSQDLRG*HSLDSI
Trigger: GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTG...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGAGACATTTACTGAACTaGGGTATGCCAGATCCACAG +
Preference number: 5 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGRHLLN*GMPDPQ
Trigger: CTGTGGATCTGGCATACCCAAGTTCAGTAAATGTCT...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGAAAGGACTGCATTCTTCTaGAGGCCCCAGAGGAGAAGA +
Preference number: 5 (lower is better)
Translates to: GPPLPAPTQPVPLFLAEERTAFF*RPQRRR
Trigger: TCTTCTCCTCTGGGGCCTCAAGAAGAATGCAGTCCT...TTCCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CAA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGTTAGGAACCAGGAGGTaGAGAACCCCAGGGATAGCC +
Preference number: 5 (lower is better)
Translates to: GETGQMTASVTPSPTLGRLGTRR*RTPGIA
Trigger: GGCTATCCCTGGGGTTCTCAACCTCCTGGTTCCTAA...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACACAGACCCTGGACAAGTaGCAGCCTCCTGCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: LLLLSLSIKETARWASDTQTLDK*QPPAPA
Trigger: GGCTGGGGCAGGAGGCTGCAACTTGTCCAGGGTCTG...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp TGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTCAGACCCTGGACAAGTaGCAGCCTCCTGCCCCAGCC +
Preference number: 5 (lower is better)
Translates to: WGNHRTLGNAIRTWALESQTLDK*QPPAPA
Trigger: GGCTGGGGCAGGAGGCTGCAACTTGTCCAGGGTCTG...ACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCCCCACATGGTCACATTaGCATCTCCAGACGCCCCAA +
Preference number: 5 (lower is better)
Translates to: TLGNAIRTWALESAIHLPPTWSH*HLQTPQ
Trigger: TTGGGGCGTCTGGAGATGCAAATGTGACCATGTGGG...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
57% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGGCTGGCTGTGTGACCTaGGGCATGTTAAGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: GETGQMTASVTPSPTLGRAGCVT*GMLSLS
Trigger: ACTGAGGCTTAACATGCCCAAGGTCACACAGCCAGC...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACGCGCACAGGACCTTGTaGGGCCTTCGGAGGAGAAGT +
Preference number: 5 (lower is better)
Translates to: HRTLGNAIRTWALESAIHAHRTL*GLRRRS
Trigger: ACTTCTCCTCCGAAGGCCCAACAAGGTCCTGTGCGC...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCAGGCTCCTCTACAATTaGTCTGGCCCCCACCCCTCA +
Preference number: 5 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCRLLYN*SGPHPS
Trigger: TGAGGGGTGGGGGCCAGACAAATTGTAGAGGAGCCT...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCCGTGGCTCCCCTGCGTaGTTTGCAGGAGAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGRGSPA*FAGEVW
Trigger: CCAGACCTCTCCTGCAAACAACGCAGGGGAGCCACG...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTGTGGAAACCTCTTCCTTaGCGTGGCTCCCCTGCGTTG +
Preference number: 5 (lower is better)
Translates to: PPQQFHQHRATALSHSDVWKPLP*RGSPAL
Trigger: CAACGCAGGGGAGCCACGCAAAGGAAGAGGTTTCCA...CACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTCAGATATAGTTGGTaGCCACCCAGCCGGAGAAGC +
Preference number: 5 (lower is better)
Translates to: PRYPHSNFTNTEQLPSATLRYSW*PPSRRS
Trigger: GCTTCTCCGGCTGGGTGGCAACCAACTATATCTGAG...AGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000455834.5
CDS CCA 90 bp GGTGGAGATGGAGAGGTCACAAGCTCTGGTGCCCCAAAATGGCTCTaGTCCTCAGATATAGTTGGTTGCCACCCTGGGAGTGAGAGGAAC +
Preference number: 5 (lower is better)
Translates to: GGDGEVTSSGAPKWL*SSDIVGCHPGSERN
Trigger: GTTCCTCTCACTCCCAGGGTGGCAACCAACTATATCTGAGGACCAGAGCCATTTTGGGGCACCAGAGCTTGTGACCTCTCCATCTCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS-3UTR CAA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCCTCAGATATAGTTGGTaGCCACCCTGCCTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: TLGNAIRTWALESAIHLPLRYSW*PPCLKG
Trigger: GCCTTTCAGGCAGGGTGGCAACCAACTATATCTGAG...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000448997.5
CDS-3UTR CAA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCCAAGCTCCGGGTGCCTaGGGTCCACTTCTAAGAAGA +
Preference number: 5 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCQAPGA*GPLLRR
Trigger: TCTTCTTAGAAGTGGACCCAAGGCACCCGGAGCTTG...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCAGGCAGAAGGAAACCCTaGCCCCAGTGCTACCTGGGA +
Preference number: 5 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPGRRKP*PQCYLG
Trigger: TCCCAGGTAGCACTGGGGCAAGGGTTTCCTTCTGCC...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGGCTTGGCCAGGGAATaGTGTACGCATGCACCCAGG +
Preference number: 5 (lower is better)
Translates to: IPPQQFHQHRATALSHSDGLARE*CTHAPR
Trigger: CCTGGGTGCATGCGTACACAATTCCCTGGCCAAGCC...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGGGACACATGGGTTATTaGAAACCCCAGGGGGTCAAC +
Preference number: 5 (lower is better)
Translates to: GETGQMTASVTPSPTLGRGHMGY*KPQGVN
Trigger: GTTGACCCCCTGGGGTTTCAAATAACCCATGTGTCC...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGAGAGGATGCTGCCTATaGGACCATACTGCCCATCAG +
Preference number: 5 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILRGCCL*DHTAHQ
Trigger: CTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGGTTGCCAGTTGGCGTaGGCCCTGGACTCAGAAGAG +
Preference number: 5 (lower is better)
Translates to: IPPQQFHQHRATALSHSDGCQLA*ALDSEE
Trigger: CTCTTCTGAGTCCAGGGCCAACGCCAACTGGCAACC...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGCTAAGAGTAAAGAGGTaGCCAGTTGGCGTTGGCCCT +
Preference number: 5 (lower is better)
Translates to: GETGQMTASVTPSPTLGRLRVKR*PVGVGP
Trigger: AGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAG...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GCTCCTACTGCCGCCAAGGACAGCCTGTTCTCCTGGTGTGGCTGTTGCGCAGGGGCATGCACATTCCACTaGACTAAGAGTAAAGAGGTT +
Preference number: 5 (lower is better)
Translates to: APTAAKDSLFSWCGCCAGACTFH*TKSKEV
Trigger: AACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC...CCCTGCGCAACAGCCACACCAGGAGAACAGGCTGTCCTTGGCGGCAGTAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCGGAGCCTTGCCCTGGTaGTGCACCCCCTTCGCCCTC +
Preference number: 5 (lower is better)
Translates to: DIQMPACTFHLTKSKEVAGALPW*CTPFAL
Trigger: GAGGGCGAAGGGGGTGCACAACCAGGGCAAGGCTCC...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp CACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCGCCTGCCAGTCCTCTaGGCTTGGACCTTTTCCTCA +
Preference number: 5 (lower is better)
Translates to: HRTLGNAIRTWALESAIHRLPVL*AWTFSS
Trigger: TGAGGAAAAGGTCCAAGCCAAGAGGACTGGCAGGCG...GTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp CCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGGGCAGATTCTGGGATaGAAATCCAGGCTGGTGTGG +
Preference number: 5 (lower is better)
Translates to: PIPPQQFHQHRATALSHSGQILG*KSRLVW
Trigger: CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCC...AGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAACCTGCCTGCCTTATGTaGGTCCCATGCATCAGATGG +
Preference number: 5 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQPACLM*VPCIRW
Trigger: CCATCTGATGCATGGGACCAACATAAGGCAGGCAGG...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATCAAGACCTCAGGGGCTaGCACAGCCTGGACTCCATC +
Preference number: 5 (lower is better)
Translates to: IPPQQFHQHRATALSHSDQDLRG*HSLDSI
Trigger: GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTG...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCTGTTTGGGGCAAGGATaGGGAGCAGCCAATAGCCCA +
Preference number: 5 (lower is better)
Translates to: PYPPIPPQQFHQHRATALCLGQG*GAANSP
Trigger: TGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACA...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp CACAGCATGGGACCTCTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCGAGGCAGCATTTGTGTaGGAGCTTGAAGAAGTGGAT +
Preference number: 5 (lower is better)
Translates to: HSMGPLGHLFQHPLNQFLEAAFV*ELEEVD
Trigger: ATCCACTTCTTCAAGCTCCAACACAAATGCTGCCTC...GAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAGAGGTCCCATGCTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CAA 90 bp AGCCAGCTTCTCATAGGGAAAGGAGTTGCCCAAGGTCCCACTGCAGGACACAGCAGGGATCAGGTGCACTaGAGTCTTCGAAGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: SQLLIGKGVAQGPTAGHSRDQVH*SLRSGH
Trigger: ATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCT...GCTGTGTCCTGCAGTGGGACCTTGGGCAACTCCTTTCCCTATGAGAAGCTGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACACTCCTGGTGTGGCTGTaGCGCAGGGATCAGGTGCAC +
Preference number: 5 (lower is better)
Translates to: LLLLSLSIKETARWASDTLLVWL*RRDQVH
Trigger: GTGCACCTGATCCCTGCGCAACAGCCACACCAGGAG...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GGTGAGACAGGCCAGATGACAGCCTCAGTTACCCCTTCCCCAACTTTGGGAAGGCTCTTCCTCCAGCAATaGCATCACTCTGACCTCTGC +
Preference number: 5 (lower is better)
Translates to: GETGQMTASVTPSPTLGRLFLQQ*HHSDLC
Trigger: GCAGAGGTCAGAGTGATGCAATTGCTGGAGGAAGAG...CCTTCCCAAAGTTGGGGAAGGGGTAACTGAGGCTGTCATCTGGCCTGTCTCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTGGTCCTAGTCCCAGCTaGGACAGGGACAGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTGPSPS*DRDRAE
Trigger: CTCAGCCCTGTCCCTGTCCAAGCTGGGACTAGGACC...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCGAACAGCAGAGGGACTaGGACGCCTCTCCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTEQQRD*DASPGR
Trigger: CCTGCCTGGAGAGGCGTCCAAGTCCCTCTGCTGTTC...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGCCTCAAGGGTTGCCTTaGGACTGTGTCCCCACATGG +
Preference number: 5 (lower is better)
Translates to: VAQGSGALESSKWPLLNLPQGLP*DCVPTW
Trigger: CCATGTGGGGACACAGTCCAAAGGCAACCCTTGAGG...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCAGAGCTGGGGTGGAGGCCACAACCCTGTGCCCAGTATCTCAGCTTCTCACTCAGCAATGGTCAGTTATaGAGCTGTGGAGTGCCTTCA +
Preference number: 5 (lower is better)
Translates to: PELGWRPQPCAQYLSFSLSNGQL*SCGVPS
Trigger: TGAAGGCACTCCACAGCTCAATAACTGACCATTGCT...GAGTGAGAAGCTGAGATACTGGGCACAGGGTTGTGGCCTCCACCCCAGCTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCATGGGGCCCTAGGGTTTaGCTTCTCATTTCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPWGPRV*LLISLF
Trigger: AAAGAGAGAAATGAGAAGCAAAACCCTAGGGCCCCA...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCCAGCCCCCAGTTCAAACATTTGTGTTCATTGCTCTTCGCCCTGATGGACTGTACCCCTTCCCCAACTTaGGGAAGGTGGTCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: PSPQFKHLCSLLFALMDCTPSPT*GRWSQP
Trigger: GGGCTGAGACCACCTTCCCAAAGTTGGGGAAGGGGT...ACAGTCCATCAGGGCGAAGAGCAATGAACACAAATGTTTGAACTGGGGGCTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp ACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCGCATGCAACCCTGGCTaGGTTTCCAGAGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: TLLAISPDTPTAISPTQSACNPG*VSRAWS
Trigger: GCTCCAGGCTCTGGAAACCAAGCCAGGGTTGCATGC...GCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp TGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTCTGCGCTCCCATGACTaGGAGGCAGTGGTTGGGCCT +
Preference number: 5 (lower is better)
Translates to: WGNHRTLGNAIRTWALESLRSHD*EAVVGP
Trigger: AGGCCCAACCACTGCCTCCAAGTCATGGGAGCGCAG...ACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GCTAAGTGTTTGGGGCAAGGATTGGGAGCAGCCAATAGCCCAGGGTCCAGGTGGAGCAAAGCACCGGTATaGGAAATCCTGGGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: AKCLGQGLGAANSPGSRWSKAPV*EILGLV
Trigger: AACCAACCCCAGGATTTCCAATACCGGTGCTTTGCT...CCACCTGGACCCTGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACACTTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCGCTTGGCTGTGAGTaGTATTCTCCTGCCCACCCT +
Preference number: 5 (lower is better)
Translates to: RTLGNAIRTWALESAIHLPLGCE*YSPAHP
Trigger: AGGGTGGGCAGGAGAATACAACTCACAGCCAAGCGG...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp AGCCTGGACTCCATCAGCTCCATGTCCTCCTCCCATTCTGCCTGCAAGTGCTCCAAAGCCACCTTCCGCTaGGCTGTGAGTTGTATTCTC +
Preference number: 5 (lower is better)
Translates to: SLDSISSMSSSHSACKCSKATFR*AVSCIL
Trigger: GAGAATACAACTCACAGCCAAGCGGAAGGTGGCTTT...GGAGCACTTGCAGGCAGAATGGGAGGAGGACATGGAGCTGATGGAGTCCAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GCTTGGCCAGGGAATTGTGTACGCATGCACCCAGGGCAGTGGAGGACTAATCAAGAGGTGGCAGATCACTaGAGGTCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: AWPGNCVRMHPGQWRTNQEVADH*RSGVRD
Trigger: GTCTCGAACTCCTGACCTCAAGTGATCTGCCACCTC...TTGATTAGTCCTCCACTGCCCTGGGTGCATGCGTACACAATTCCCTGGCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCCCAGCTTCTCAGCTCTGAAACCCAGCATGAGGCCCATGTCTGGCCTCCCAGTAGGATAAGGATCTATTaGCCTGCCTGTATCCTCCAC +
Preference number: 5 (lower is better)
Translates to: PQLLSSETQHEAHVWPPSRIRIY*PACILH
Trigger: GTGGAGGATACAGGCAGGCAAATAGATCCTTATCCT...ACTGGGAGGCCAGACATGGGCCTCATGCTGGGTTTCAGAGCTGAGAAGCTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAATCACAGCAGGGATTaGGCTCCAGCCCAAGGGGAT +
Preference number: 5 (lower is better)
Translates to: PYPPIPPQQFHQHRATALNHSRD*APAQGD
Trigger: ATCCCCTTGGGCTGGAGCCAAATCCCTGCTGTGATT...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000434410.5
CDS-3UTR CAA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCTCAGATATAGTTGGTaGCCACCCTGCCGGTCTTCC +
Preference number: 5 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPLRYSW*PPCRSS
Trigger: GGAAGACCGGCAGGGTGGCAACCAACTATATCTGAG...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434410.5
CDS-3UTR CAA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTGGACACATGGGTTATTaGAAACCCCAGGGGGTCAAC +
Preference number: 5 (lower is better)
Translates to: AISPDTPTAISPTQSNCPGHMGY*KPQGVN
Trigger: GTTGACCCCCTGGGGTTTCAAATAACCCATGTGTCC...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp TCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCTGAGCCCCATGAGACAGCCTGGTTaGCCATGTTTCTTAGGACCC +
Preference number: 5 (lower is better)
Translates to: SVSGRGINTGGTILRLSPMRQPG*PCFLGP
Trigger: GGGTCCTAAGAAACATGGCAAACCAGGCTGTCTCAT...GGGGCTCAGCCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CAA 90 bp ACCAGTTCCTCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCCTGCCTGCCTTATGTaGGTCCCATGCATCAGATGG +
Preference number: 5 (lower is better)
Translates to: TSSSVSGRGINTGGTILRPACLM*VPCIRW
Trigger: CCATCTGATGCATGGGACCAACATAAGGCAGGCAGG...CCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGAGGAACTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CAA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCATTCGAGTCTCTGGCTTaGGCCTCAGGAGCAAGGGAG +
Preference number: 5 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPFESLA*ASGARE
Trigger: CTCCCTTGCTCCTGAGGCCAAAGCCAGAGACTCGAA...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTCAAGACCTCAGGGGCTaGCACAGCCTGGACTCCATC +
Preference number: 5 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTQDLRG*HSLDSI
Trigger: GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTG...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGTGTTTGGGGCAAGGATaGGGAGCAGCCAATAGCCCA +
Preference number: 5 (lower is better)
Translates to: VAQGSGALESSKWPLLNLCLGQG*GAANSP
Trigger: TGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACA...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCGAAGAAGTGGATTGTTaGCACCGCCTGGGCAAAGGG +
Preference number: 5 (lower is better)
Translates to: GSSLQLNERGCATQELCSEEVDC*HRLGKG
Trigger: CCCTTTGCCCAGGCGGTGCAAACAATCCACTTCTTC...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATTGGCCATTGCTCAACTaGAATGGCTGCCTGGGTCGG +
Preference number: 5 (lower is better)
Translates to: IPPQQFHQHRATALSHSDWPLLN*NGCLGR
Trigger: CCGACCCAGGCAGCCATTCAAGTTGAGCAATGGCCA...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGGGATCAGGTGCACTaGAGTCTTCGAAGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: PYPPIPPQQFHQHRATALRDQVH*SLRSGH
Trigger: ATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCT...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTCCAGTTCAGGGGGCTaGTCCAGGGCAGAAGGTCAT +
Preference number: 5 (lower is better)
Translates to: ACTFHLTKSKEVASWRWPSSSGG*SRAEGH
Trigger: ATGACCTTCTGCCCTGGACAAGCCCCCTGAACTGGA...GGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATGGTCCTAGTCCCAGCTaGGACAGGGACAGGGCTGAG +
Preference number: 5 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHGPSPS*DRDRAE
Trigger: CTCAGCCCTGTCCCTGTCCAAGCTGGGACTAGGACC...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCACCTCAAGGGTTGCCTTaGGACTGTGTCCCCACATGG +
Preference number: 5 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRAPQGLP*DCVPTW
Trigger: CCATGTGGGGACACAGTCCAAAGGCAACCCTTGAGG...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCAGAGATAAGGCTTCTCTaGCTGTCCCTGTCAATCAAA +
Preference number: 5 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPEIRLL*LSLSIK
Trigger: TTTGATTGACAGGGACAGCAAGAGAAGCCTTATCTC...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACCAGTCTTTCCACCCTaGGAGGCACCACCAAGGGCC +
Preference number: 5 (lower is better)
Translates to: LNTLLAISPDTPTAISPTPVFPP*EAPPRA
Trigger: GGCCCTTGGTGGTGCCTCCAAGGGTGGAAAGACTGG...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGCCAGTCTTTCCACCCTaGGAGGCACCACCAAGGGCC +
Preference number: 5 (lower is better)
Translates to: NTLLAISPDTPTAISPTQPVFPP*EAPPRA
Trigger: GGCCCTTGGTGGTGCCTCCAAGGGTGGAAAGACTGG...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTAGGCCTGGCACCCAGTaGATGGTGCTCAGGGTACAG +
Preference number: 5 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTRPGTQ*MVLRVQ
Trigger: CTGTACCCTGAGCACCATCAACTGGGTGCCAGGCCT...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAAGGCTCCTCTACAATTaGTCTGGCCCCCACCCCTCA +
Preference number: 5 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRARLLYN*SGPHPS
Trigger: TGAGGGGTGGGGGCCAGACAAATTGTAGAGGAGCCT...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CAATTACCTCAGAGGGGAAGGCACCCACTCATTCCGCAAGCGGGGGAAATCCTGCTACTCTGTGGGAACTaGAGTGAGAGGGGATGTGAA +
Preference number: 5 (lower is better)
Translates to: QLPQRGRHPLIPQAGEILLLCGN*SERGCE
Trigger: TTCACATCCCCTCTCACTCAAGTTCCCACAGAGTAG...CAGGATTTCCCCCGCTTGCGGAATGAGTGGGTGCCTTCCCCTCTGAGGTAATTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCAACTCTCTGTCTTCCTaGGTTTCAGGCTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPNSLSS*VSGCSR
Trigger: CCTGGAGCAGCCTGAAACCAAGGAAGACAGAGAGTT...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTAACTCTCTGTCTTCCTaGGTTTCAGGCTGCTCCAGG +
Preference number: 5 (lower is better)
Translates to: AISPDTPTAISPTQSNCPNSLSS*VSGCSR
Trigger: CCTGGAGCAGCCTGAAACCAAGGAAGACAGAGAGTT...AGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GATGCCCGGTACTGTTGTCGCCAGCACTCAGGTCTAGGAGAGTGGTCTTCACAAAGGCTCAGTCTTCAGTaGGGAGCTGGCAGAAAACAC +
Preference number: 5 (lower is better)
Translates to: DARYCCRQHSGLGEWSSQRLSLQ*GAGRKH
Trigger: GTGTTTTCTGCCAGCTCCCAACTGAAGACTGAGCCT...TTGTGAAGACCACTCTCCTAGACCTGAGTGCTGGCGACAACAGTACCGGGCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGGCTTGGCCAGGGAATaGTGTACGCATGCACCCAGG +
Preference number: 5 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRGLARE*CTHAPR
Trigger: CCTGGGTGCATGCGTACACAATTCCCTGGCCAAGCC...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp ATAAGAAGGTTTCTGAAGGCATGGTACAGAAGGTGCCAGCAGAGGTATGGGCTAGTGCTCGAGCCAGGCTaGGCCAGGGAATTGTGTACG +
Preference number: 5 (lower is better)
Translates to: IRRFLKAWYRRCQQRYGLVLEPG*ARELCT
Trigger: CGTACACAATTCCCTGGCCAAGCCTGGCTCGAGCAC...TAGCCCATACCTCTGCTGGCACCTTCTGTACCATGCCTTCAGAAACCTTCTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCGCATGCACATTCCACTaGACTAAGAGTAAAGAGGTT +
Preference number: 5 (lower is better)
Translates to: GSGHISQDLRGLHSLDSIACTFH*TKSKEV
Trigger: AACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp CTGGGCCACCTCTTCCAGCACCCACTCAACCAGTTCCTCTGTTTCTGGCCGAGGGCATGCACATTCCACTaGACTAAGAGTAAAGAGGTT +
Preference number: 5 (lower is better)
Translates to: LGHLFQHPLNQFLCFWPRACTFH*TKSKEV
Trigger: AACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGC...CCTCGGCCAGAAACAGAGGAACTGGTTGAGTGGGTGCTGGAAGAGGTGGCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CAA 90 bp CCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATGTGAGTACATACCTTCTCTaGCTCTCCATGCCTGGCGAA +
Preference number: 5 (lower is better)
Translates to: PPQQFHQHRATALSHSDVSTYLL*LSMPGE
Trigger: TTCGCCAGGCATGGAGAGCAAGAGAAGGTATGTACT...CACATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACACGCCTGCCAGTCCTCTaGGCTTGGACCTTTTCCTCA +
Preference number: 5 (lower is better)
Translates to: LLLLSLSIKETARWASDTRLPVL*AWTFSS
Trigger: TGAGGAAAAGGTCCAAGCCAAGAGGACTGGCAGGCG...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCCTGCCTGCCTTATGTaGGTCCCATGCATCAGATGG +
Preference number: 5 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWAPACLM*VPCIRW
Trigger: CCATCTGATGCATGGGACCAACATAAGGCAGGCAGG...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCGCCTGCAAGTGCTCCTaGACATATGCTGGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFACKCS*TYAGGG
Trigger: ACCACCACCAGCATATGTCAAGGAGCACTTGCAGGC...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTGCCTGCAAGTGCTCCTaGACATATGCTGGTGGTGGT +
Preference number: 5 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWAACKCS*TYAGGG
Trigger: ACCACCACCAGCATATGTCAAGGAGCACTTGCAGGC...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCATGTTTGGGGCAAGGATaGGGAGCAGCCAATAGCCCA +
Preference number: 5 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPCLGQG*GAANSP
Trigger: TGGGCTATTGGCTGCTCCCAATCCTTGCCCCAAACA...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp ACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCCGAGGCAGCATTTGTGTaGGAGCTTGAAGAAGTGGAT +
Preference number: 5 (lower is better)
Translates to: TLGNAIRTWALESAIHLPEAAFV*ELEEVD
Trigger: ATCCACTTCTTCAAGCTCCAACACAAATGCTGCCTC...GGGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp AGGAGAAGAGGCTGTCTGCATTCCTCGGCTCATGGCTCTTCCTCCAGCAATTGCTCTTCGAAGTGGCCATaGCTCAACTTGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: RRRGCLHSSAHGSSSSNCSSKWP*LNLNGC
Trigger: GCAGCCATTCAAGTTGAGCAATGGCCACTTCGAAGA...GCAATTGCTGGAGGAAGAGCCATGAGCCGAGGAATGCAGACAGCCTCTTCTCCT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp CTGCTCCATGTCCTGGTGGAAGACGTAGGGAGGGTTGCTGACAATCAGGTCCATTCTTCGAAGTGGCCATaGCTCAACTTGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: LLHVLVEDVGRVADNQVHSSKWP*LNLNGC
Trigger: GCAGCCATTCAAGTTGAGCAATGGCCACTTCGAAGA...ATGGACCTGATTGTCAGCAACCCTCCCTACGTCTTCCACCAGGACATGGAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CAA 90 bp TGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTTCCAGTTCAGGGGGCTaGTCCAGGGCAGAAGGTCAT +
Preference number: 5 (lower is better)
Translates to: WGNHRTLGNAIRTWALESSSSGG*SRAEGH
Trigger: ATGACCTTCTGCCCTGGACAAGCCCCCTGAACTGGA...ACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTAGGACTGCATTCTTCTaGAGGCCCCAGAGGAGAAGA +
Preference number: 5 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPRTAFF*RPQRRR
Trigger: TCTTCTCCTCTGGGGCCTCAAGAAGAATGCAGTCCT...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp TGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTTTAGGAACCAGGAGGTaGAGAACCCCAGGGATAGCC +
Preference number: 5 (lower is better)
Translates to: CRAWGNHRTLGNAIRTWALGTRR*RTPGIA
Trigger: GGCTATCCCTGGGGTTCTCAACCTCCTGGTTCCTAA...AGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCGAACAGCAGAGGGACTaGGACGCCTCTCCAGGCAGG +
Preference number: 5 (lower is better)
Translates to: DIQMPACTFHLTKSKEVAEQQRD*DASPGR
Trigger: CCTGCCTGGAGAGGCGTCCAAGTCCCTCTGCTGTTC...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCAGAACTCCAGGCTTTaGTCCAGACTGTCCCTACTG +
Preference number: 5 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPQNSRL*SRLSLL
Trigger: CAGTAGGGACAGTCTGGACAAAAGCCTGGAGTTCTG...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTGTCCTCGCCTGACCTaGTATTCTGCCCCACCTAGT +
Preference number: 5 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGCPRLT*YSAPPS
Trigger: ACTAGGTGGGGCAGAATACAAGGTCAGGCGAGGACA...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGGCATGCAACCCTGGCTaGGTTTCCAGAGCCTGGAGC +
Preference number: 5 (lower is better)
Translates to: NTLLAISPDTPTAISPTQACNPG*VSRAWS
Trigger: GCTCCAGGCTCTGGAAACCAAGCCAGGGTTGCATGC...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCAATAGTGCCCATTCCTaGTGCCTGGCACAGTGCCAG +
Preference number: 5 (lower is better)
Translates to: GNHRTLGNAIRTWALESANSAHS*CLAQCQ
Trigger: CTGGCACTGTGCCAGGCACAAGGAATGGGCACTATT...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGAGGCTCAGTCTTCAGTaGGGAGCTGGCAGAAAACAC +
Preference number: 5 (lower is better)
Translates to: VAQGSGALESSKWPLLNLRLSLQ*GAGRKH
Trigger: GTGTTTTCTGCCAGCTCCCAACTGAAGACTGAGCCT...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCTGGAAACCTCTTCCTTaGCGTGGCTCCCCTGCGTTG +
Preference number: 5 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTWKPLP*RGSPAL
Trigger: CAACGCAGGGGAGCCACGCAAAGGAAGAGGTTTCCA...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS TCA 90 bp GGGGGAAAATCACACCAAACCCATGGCAAGCAATGCATTAGTCTATaGATATCCAAGGCCTGGGAGGCAGCTCAACACACAGCAGGGACC +
Preference number: 5 (lower is better)
Translates to: GGKSHQTHGKQCISL*ISKAWEAAQHTAGT
Trigger: GGTCCCTGCTGTGTGTTGAGCTGCCTCCCAGGCCTTGGATATTCATAGACTAATGCATTGCTTGCCATGGGTTTGGTGTGATTTTCCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS-3UTR CAA 90 bp GTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCCAAGCTCCGGGTGCCTaGGGTCCACTTCTAAGAAGA +
Preference number: 5 (lower is better)
Translates to: VSQYFTGHIPRYPHSNFTQAPGA*GPLLRR
Trigger: TCTTCTTAGAAGTGGACCCAAGGCACCCGGAGCTTG...GGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000443894.1
ENST00000448997.5
ENST00000455834.5
CDS-3UTR CAA 90 bp CTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAAGCAGGCAGTCATCCTaGAGCCAAAACGCAGATGAG +
Preference number: 5 (lower is better)
Translates to: LYWPYPPIPPQQFHQHRASRQSS*SQNADE
Trigger: CTCATCTGCGTTTTGGCTCAAGGATGACTGCCTGCT...TGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCAGCAGGCAGTCATCCTaGAGCCAAAACGCAGATGAG +
Preference number: 5 (lower is better)
Translates to: GNHRTLGNAIRTWALESASRQSS*SQNADE
Trigger: CTCATCTGCGTTTTGGCTCAAGGATGACTGCCTGCT...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCAAGAGGATGCTGCCTATaGGACCATACTGCCCATCAG +
Preference number: 5 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPRGCCL*DHTAHQ
Trigger: CTGATGGGCAGTATGGTCCAATAGGCAGCATCCTCT...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp CCAGCCTCTGCCCATTTCCACGTTGCAATTCCAAAGCCACTTCAATCAGTAGGCCTAAGAGTAAAGAGGTaGCCAGTTGGCGTTGGCCCT +
Preference number: 5 (lower is better)
Translates to: PASAHFHVAIPKPLQSVGLRVKR*PVGVGP
Trigger: AGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAG...GCCTACTGATTGAAGTGGCTTTGGAATTGCAACGTGGAAATGGGCAGAGGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCTCTTTCCAGACTGCCTaGTATCCCTGCCTGCCTTAT +
Preference number: 5 (lower is better)
Translates to: RTLGNAIRTWALESAIHLSFQTA*YPCLPY
Trigger: ATAAGGCAGGCAGGGATACAAGGCAGTCTGGAAAGA...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp AAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATTGGCCATTGCTCAACTaGAATGGCTGCCTGGGTCGG +
Preference number: 5 (lower is better)
Translates to: KSQNPGKCHKNLGSGKCHWPLLN*NGCLGR
Trigger: CCGACCCAGGCAGCCATTCAAGTTGAGCAATGGCCA...ATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp TCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCAAGGGATCAGGTGCACTaGAGTCTTCGAAGTGGCCAT +
Preference number: 5 (lower is better)
Translates to: SQNPGKCHKNLGSGKCHPRDQVH*SLRSGH
Trigger: ATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCT...TGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp AACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCCCAGGGGTAGAGTTGCTTaGACAGTCCCAAATCCAGTT +
Preference number: 5 (lower is better)
Translates to: NPGKCHKNLGSGKCHPPPRGRVA*TVPNPV
Trigger: AACTGGATTTGGGACTGTCAAAGCAACTCTACCCCT...GGGAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp CCAGGTCCCAATCAGATCCCTGGGCCCACTGTGGTCCTGGCCATCTCACATCCATTTCTTAGCCCCAGTTaGTTTCTTCGTCAGTATAAC +
Preference number: 5 (lower is better)
Translates to: PGPNQIPGPTVVLAISHPFLSPS*FLRQYN
Trigger: GTTATACTGACGAAGAAACAAACTGGGGCTAAGAAA...TGGATGTGAGATGGCCAGGACCACAGTGGGCCCAGGGATCTGATTGGGACCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp ATTGCTCAACTTGAATGGCTGCCTGGGTCGGGCAGAAGGCCAGGTCCTCATGGCTGCTGTCTTAAACTCTaGTGCTCAAGTAATCCTCCT +
Preference number: 5 (lower is better)
Translates to: IAQLEWLPGSGRRPGPHGCCLKL*CSSNPP
Trigger: AGGAGGATTACTTGAGCACAAGAGTTTAAGACAGCA...GCCATGAGGACCTGGCCTTCTGCCCGACCCAGGCAGCCATTCAAGTTGAGCAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAAACCCCTTCCCCAACTTaGGGAAGGTGGTCTCAGCCC +
Preference number: 5 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQTPSPT*GRWSQP
Trigger: GGGCTGAGACCACCTTCCCAAAGTTGGGGAAGGGGT...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GTGCGGGCCAAGAGAGTAGTGAGCAATGGTCAGTTATTGAGCTGTGGAGTGCCTAGCAAAGCACCGGTATaGGAAATCCTGGGGTTGGTT +
Preference number: 5 (lower is better)
Translates to: VRAKRVVSNGQLLSCGVPSKAPV*EILGLV
Trigger: AACCAACCCCAGGATTTCCAATACCGGTGCTTTGCT...AGGCACTCCACAGCTCAATAACTGACCATTGCTCACTACTCTCTTGGCCCGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GGCAGTGGGCACATCTCTCAAGACCTCAGGGGCTTGCACAGCCTGGACTCCATCCGTGTCAATTTTTCTTaGGTACCACAGTATGACAGT +
Preference number: 5 (lower is better)
Translates to: GSGHISQDLRGLHSLDSIRVNFS*VPQYDS
Trigger: ACTGTCATACTGTGGTACCAAAGAAAAATTGACACG...GATGGAGTCCAGGCTGTGCAAGCCCCTGAGGTCTTGAGAGATGTGCCCACTGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGAATAGTGCCCATTCCTaGTGCCTGGCACAGTGCCAG +
Preference number: 5 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKNSAHS*CLAQCQ
Trigger: CTGGCACTGTGCCAGGCACAAGGAATGGGCACTATT...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGCTACTCTGTGGGAACTaGAGTGAGAGGGGATGTGAA +
Preference number: 5 (lower is better)
Translates to: VAQGSGALESSKWPLLNLLLCGN*SERGCE
Trigger: TTCACATCCCCTCTCACTCAAGTTCCCACAGAGTAG...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GTTGCGCAGGGATCAGGTGCACTTGAGTCTTCGAAGTGGCCATTGCTCAACTTGAACCTCAGCTCACCATaGCAACTACTCTGTGGGAAC +
Preference number: 5 (lower is better)
Translates to: VAQGSGALESSKWPLLNLNLSSP*QLLCGN
Trigger: GTTCCCACAGAGTAGTTGCAATGGTGAGCTGAGGTT...CAAGTTGAGCAATGGCCACTTCGAAGACTCAAGTGCACCTGATCCCTGCGCAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GGCTCAAGCCTTCAGTTAAATGAACGTGGATGTGCGACCCAGGAACTGTGCAGCCCTATTTCTGCACACTaGCCAGTAGAGGCACTGGTT +
Preference number: 5 (lower is better)
Translates to: GSSLQLNERGCATQELCSPISAH*PVEALV
Trigger: AACCAGTGCCTCTACTGGCAAGTGTGCAGAAATAGG...GCTGCACAGTTCCTGGGTCGCACATCCACGTTCATTTAACTGAAGGCTTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS TCA 90 bp GTCCTCTTGACAACACTAAACTTAACTGTTTTGGCTCCAAGGACATaGGCCACGATGTACTCACTGGATTCCCGGGCCTCAGGGATACCC +
Preference number: 5 (lower is better)
Translates to: VLLTTLNLTVLAPRT*ATMYSLDSRASGIP
Trigger: GGGTATCCCTGAGGCCCGGGAATCCAGTGAGTACATCGTGGCTCATGTCCTTGGAGCCAAAACAGTTAAGTTTAGTGTTGTCAAGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS-3UTR CAA 90 bp TGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTCTCAGATATAGTTGGTaGCCACCCTGCCTGAAAGGC +
Preference number: 5 (lower is better)
Translates to: WGNHRTLGNAIRTWALESLRYSW*PPCLKG
Trigger: GCCTTTCAGGCAGGGTGGCAACCAACTATATCTGAG...ACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000448997.5
CDS-3UTR CAA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGAGCAGGCAGTCATCCTaGAGCCAAAACGCAGATGAG +
Preference number: 5 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKSRQSS*SQNADE
Trigger: CTCATCTGCGTTTTGGCTCAAGGATGACTGCCTGCT...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCAGTACATACCTTCTCTaGCTCTCCATGCCTGGCGAA +
Preference number: 5 (lower is better)
Translates to: GNHRTLGNAIRTWALESASTYLL*LSMPGE
Trigger: TTCGCCAGGCATGGAGAGCAAGAGAAGGTATGTACT...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCTTCGAGTCTCTGGCTTaGGCCTCAGGAGCAAGGGAG +
Preference number: 5 (lower is better)
Translates to: DIQMPACTFHLTKSKEVAFESLA*ASGARE
Trigger: CTCCCTTGCTCCTGAGGCCAAAGCCAGAGACTCGAA...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTGAGGCAGCATTTGTGTaGGAGCTTGAAGAAGTGGAT +
Preference number: 5 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPEAAFV*ELEEVD
Trigger: ATCCACTTCTTCAAGCTCCAACACAAATGCTGCCTC...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCTCTTCGAAGTGGCCATaGCTCAACTTGAATGGCTGC +
Preference number: 5 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFSSKWP*LNLNGC
Trigger: GCAGCCATTCAAGTTGAGCAATGGCCACTTCGAAGA...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACACTCTTCCTCCAGCAATaGCATCACTCTGACCTCTGC +
Preference number: 5 (lower is better)
Translates to: LLLLSLSIKETARWASDTLFLQQ*HHSDLC
Trigger: GCAGAGGTCAGAGTGATGCAATTGCTGGAGGAAGAG...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp TGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTAGGACTGCATTCTTCTaGAGGCCCCAGAGGAGAAGA +
Preference number: 5 (lower is better)
Translates to: WGNHRTLGNAIRTWALESRTAFF*RPQRRR
Trigger: TCTTCTCCTCTGGGGCCTCAAGAAGAATGCAGTCCT...ACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTATAGGACCCTCCACTaGGTATCATCTCCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKYRTLH*VSSPWC
Trigger: GCACCAGGGAGATGATACCAAGTGGAGGGTCCTATA...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTTTTCTTAGCCCCAGTTaGTTTCTTCGTCAGTATAAC +
Preference number: 5 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSFLSPS*FLRQYN
Trigger: GTTATACTGACGAAGAAACAAACTGGGGCTAAGAAA...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp AATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGGCTGGCTGTGTGACCTaGGGCATGTTAAGCCTCAGT +
Preference number: 5 (lower is better)
Translates to: NTLLAISPDTPTAISPTQAGCVT*GMLSLS
Trigger: ACTGAGGCTTAACATGCCCAAGGTCACACAGCCAGC...CTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CTTCTCTTGCTGTCCCTGTCAATCAAAGAGACTGCAAGGTGGGCTTCAGACACATGTGTACATGTGATGTaGCTTGGCTTCCCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: LLLLSLSIKETARWASDTCVHVM*LGFPRA
Trigger: GGCTCTGGGGAAGCCAAGCAACATCACATGTACACA...TGTGTCTGAAGCCCACCTTGCAGTCTCTTTGATTGACAGGGACAGCAAGAGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTCAGACCTGCCTCACCTaGCTGTGTGACACTGGGCAA +
Preference number: 5 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCQTCLT*LCDTGQ
Trigger: TTGCCCAGTGTCACACAGCAAGGTGAGGCAGGTCTG...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCCCTATTTCTGCACACTaGCCAGTAGAGGCACTGGTT +
Preference number: 5 (lower is better)
Translates to: GNHRTLGNAIRTWALESAPISAH*PVEALV
Trigger: AACCAGTGCCTCTACTGGCAAGTGTGCAGAAATAGG...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CTTGTGGCCCCAGCTGCCCCGACAGTGTCACTCTCCAACACTGCACTCTCTTCTGATGCCTATATAGTGTaGTCTCTCTATCTTGGGTTT +
Preference number: 5 (lower is better)
Translates to: LVAPAAPTVSLSNTALSSDAYIV*SLYLGF
Trigger: AAACCCAAGATAGAGAGACAACACTATATAGGCATC...AGAAGAGAGTGCAGTGTTGGAGAGTGACACTGTCGGGGCAGCTGGGGCCACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTATGAGACAGCCTGGTTaGCCATGTTTCTTAGGACCC +
Preference number: 5 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTMRQPG*PCFLGP
Trigger: GGGTCCTAAGAAACATGGCAAACCAGGCTGTCTCAT...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp TACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGAGTACATACCTTCTCTaGCTCTCCATGCCTGGCGAA +
Preference number: 5 (lower is better)
Translates to: YFTGHIPRYPHSNFTNTESTYLL*LSMPGE
Trigger: TTCGCCAGGCATGGAGAGCAAGAGAAGGTATGTACT...CTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTCTTTCCAGACTGCCTaGTATCCCTGCCTGCCTTAT +
Preference number: 5 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKSFQTA*YPCLPY
Trigger: ATAAGGCAGGCAGGGATACAAGGCAGTCTGGAAAGA...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCAGGGGTAGAGTTGCTTaGACAGTCCCAAATCCAGTT +
Preference number: 5 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFRGRVA*TVPNPV
Trigger: AACTGGATTTGGGACTGTCAAAGCAACTCTACCCCT...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTACTCTACCTCAAGGGTaGCCTTTGGACTGTGTCCCC +
Preference number: 5 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCTLPQG*PLDCVP
Trigger: GGGGACACAGTCCAAAGGCAACCCTTGAGGTAGAGT...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp AGGTCACATCCTCGTGAGGGGCAGATTCTGGGATTGAAATCCAGGCTGGTGTGGTCTGCTGCTTTCTGTTaGATTCATCACTTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: RSHPREGQILGLKSRLVWSAAFC*IHHFPL
Trigger: AAGGGGAAAGTGATGAATCAAACAGAAAGCAGCAGA...CCACACCAGCCTGGATTTCAATCCCAGAATCTGCCCCTCACGAGGATGTGACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCAGCAATGGTCAGTTATaGAGCTGTGGAGTGCCTTCA +
Preference number: 5 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGSNGQL*SCGVPS
Trigger: TGAAGGCACTCCACAGCTCAATAACTGACCATTGCT...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCCCCCAGTTCAAACATTaGTGTTCATTGCTCTTCGCC +
Preference number: 5 (lower is better)
Translates to: GNHRTLGNAIRTWALESAPQFKH*CSLLFA
Trigger: GGCGAAGAGCAATGAACACAAATGTTTGAACTGGGG...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp ATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTTGGAAATCCTGGGGTaGGTTAGTGAAAGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: MGKSQNPGKCHKNLGSGKLEILG*VSESWE
Trigger: CTCCCAGCTTTCACTAACCAACCCCAGGATTTCCAA...CTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS TCA 90 bp GTCTTGGCCACTTACGTTTTCTTCACATTTTTAGCTGGAGTGGGCTaGGCCCATAGCTCAGTCTCTGCTAATAAACGGGTTGGTGGTAGG +
Preference number: 5 (lower is better)
Translates to: VLATYVFFTFLAGVG*AHSSVSANKRVGGR
Trigger: CCTACCACCAACCCGTTTATTAGCAGAGACTGAGCTATGGGCTCAGCCCACTCCAGCTAAAAATGTGAAGAAAACGTAAGTGGCCAAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS-3UTR CAA 90 bp TCCTCTGTTTCTGGCCGAGGAATAAACACTGGGGGCACCATCCTTAGGCTGAGCCTTAAAATCAAGGTATaGGCAGGACTGCATTCTTCT +
Preference number: 5 (lower is better)
Translates to: SSVSGRGINTGGTILRLSLKIKV*AGLHSS
Trigger: AGAAGAATGCAGTCCTGCCAATACCTTGATTTTAAG...GCTCAGCCTAAGGATGGTGCCCCCAGTGTTTATTCCTCGGCCAGAAACAGAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS-3UTR CAA 90 bp CAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTTCTGCTGCTTTCTGTTaGATTCATCACTTTCCCCTT +
Preference number: 5 (lower is better)
Translates to: QNPGKCHKNLGSGKCHPPSAAFC*IHHFPL
Trigger: AAGGGGAAAGTGATGAATCAAACAGAAAGCAGCAGA...AGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp ATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCAGCCACTCTGATAAACATTTGTGTTCATaGCTCTTCGCCCTGATGGAC +
Preference number: 5 (lower is better)
Translates to: IPPQQFHQHRATALSHSDKHLCS*LFALMD
Trigger: GTCCATCAGGGCGAAGAGCAATGAACACAAATGTTT...ATCAGAGTGGCTGAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp ATGCAGAGCATGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCAAACATTTGTGTTCATaGCTCTTCGCCCTGATGGAC +
Preference number: 5 (lower is better)
Translates to: MQSMGKSQNPGKCHKNLGKHLCS*LFALMD
Trigger: GTCCATCAGGGCGAAGAGCAATGAACACAAATGTTT...GCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCATGCTCTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCTGTGTACATGTGATGTaGCTTGGCTTCCCCAGAGCC +
Preference number: 5 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFCVHVM*LGFPRA
Trigger: GGCTCTGGGGAAGCCAAGCAACATCACATGTACACA...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTAAACTGGCAGAGAACTaGGTCTGGGGCCATGTAGTG +
Preference number: 5 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCKLAEN*VWGHVV
Trigger: CACTACATGGCCCCAGACCAAGTTCTCTGCCAGTTT...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAGCAACTGCCCTCGATGCCTATATAGTGTaGTCTCTCTATCTTGGGTTT +
Preference number: 5 (lower is better)
Translates to: PYPPIPPQQFHQHRATALDAYIV*SLYLGF
Trigger: AAACCCAAGATAGAGAGACAACACTATATAGGCATC...GAGGGCAGTTGCTCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTATGAGACAGCCTGGTTaGCCATGTTTCTTAGGACCC +
Preference number: 5 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCMRQPG*PCFLGP
Trigger: GGGTCCTAAGAAACATGGCAAACCAGGCTGTCTCAT...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp ACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGTTGGCGTTGGCCCTGGACTAGACATTTACTGAACTaGGGTATGCCAGATCCACAG +
Preference number: 5 (lower is better)
Translates to: TFHLTKSKEVASWRWPWTRHLLN*GMPDPQ
Trigger: CTGTGGATCTGGCATACCCAAGTTCAGTAAATGTCT...AGTCCAGGGCCAACGCCAACTGGCAACCTCTTTACTCTTAGTCAAGTGGAATGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACAAGGGGTAGAGTTGCTTaGACAGTCCCAAATCCAGTT +
Preference number: 5 (lower is better)
Translates to: LNTLLAISPDTPTAISPTRGRVA*TVPNPV
Trigger: AACTGGATTTGGGACTGTCAAAGCAACTCTACCCCT...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGACCCCAGTTCAAACATTaGTGTTCATTGCTCTTCGCC +
Preference number: 5 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRPQFKH*CSLLFA
Trigger: GGCGAAGAGCAATGAACACAAATGTTTGAACTGGGG...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp TGGGGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGAGATAAGGCTTCTCTaGCTGTCCCTGTCAATCAAA +
Preference number: 5 (lower is better)
Translates to: WGNHRTLGNAIRTWALESEIRLL*LSLSIK
Trigger: TTTGATTGACAGGGACAGCAAGAGAAGCCTTATCTC...ACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACATGGGGCCCTAGGGTTTaGCTTCTCATTTCTCTCTTT +
Preference number: 5 (lower is better)
Translates to: LNTLLAISPDTPTAISPTWGPRV*LLISLF
Trigger: AAAGAGAGAAATGAGAAGCAAAACCCTAGGGCCCCA...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GATTCCATAGGACACAAGAGAACACACTTAAGTCATGGGGAGCCAGCTAAGTGTAAAGCCACCTTCCGCTaGGCTGTGAGTTGTATTCTC +
Preference number: 5 (lower is better)
Translates to: DSIGHKRTHLSHGEPAKCKATFR*AVSCIL
Trigger: GAGAATACAACTCACAGCCAAGCGGAAGGTGGCTTT...ACACTTAGCTGGCTCCCCATGACTTAAGTGTGTTCTCTTGTGTCCTATGGAATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp ATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACACAGAAGGATAAGGATCTATTaGCCTGCCTGTATCCTCCAC +
Preference number: 5 (lower is better)
Translates to: ILYWPYPPIPPQQFHQHRRIRIY*PACILH
Trigger: GTGGAGGATACAGGCAGGCAAATAGATCCTTATCCT...TCTGTGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp AGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCATCCACCTCGATAGACTAACTTGTTaGCTTCAAAGTCGGATAAGC +
Preference number: 5 (lower is better)
Translates to: RTLGNAIRTWALESAIHLDRLTC*LQSRIS
Trigger: GCTTATCCGACTTTGAAGCAAACAAGTTAGTCTATC...GAGGTGGATGGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTTTTCTGGGCAGAAAGTaGTGCCCGAGGCCGGCTCCT +
Preference number: 5 (lower is better)
Translates to: EALVALVLNNLYKGDYYSFLGRK*CPRPAP
Trigger: AGGAGCCGGCCTCGGGCACAACTTTCTGCCCAGAAA...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GAATCGAAGGTGGATAGGGAAAGACATGCTGTCCCGCAGAGGTTAAAGGGGTTCCTTAAAATCAAGGTATaGGCAGGACTGCATTCTTCT +
Preference number: 5 (lower is better)
Translates to: ESKVDRERHAVPQRLKGFLKIKV*AGLHSS
Trigger: AGAAGAATGCAGTCCTGCCAATACCTTGATTTTAAG...GAACCCCTTTAACCTCTGCGGGACAGCATGTCTTTCCCTATCCACCTTCGATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GGAAATCACAGAACCCTGGGAAATGCCATAAGAACCTGGGCTCTGGAAAGTGCCCGTGTCAATTTTTCTTaGGTACCACAGTATGACAGT +
Preference number: 5 (lower is better)
Translates to: GNHRTLGNAIRTWALESARVNFS*VPQYDS
Trigger: ACTGTCATACTGTGGTACCAAAGAAAAATTGACACG...GGCACTTTCCAGAGCCCAGGTTCTTATGGCATTTCCCAGGGTTCTGTGATTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GACATTCAGATGCCAGCATGCACATTCCACTTGACTAAGAGTAAAGAGGTTGCCAGACATTTACTGAACTaGGGTATGCCAGATCCACAG +
Preference number: 5 (lower is better)
Translates to: DIQMPACTFHLTKSKEVARHLLN*GMPDPQ
Trigger: CTGTGGATCTGGCATACCCAAGTTCAGTAAATGTCT...GGCAACCTCTTTACTCTTAGTCAAGTGGAATGTGCATGCTGGCATCTGAATGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp CAGGTCAGATGTGGGCCACATGGGAAGTCCCAGCTCTATTCTAGAAAATGCATGCTTAAAATCAAGGTATaGGCAGGACTGCATTCTTCT +
Preference number: 5 (lower is better)
Translates to: QVRCGPHGKSQLYSRKCMLKIKV*AGLHSS
Trigger: AGAAGAATGCAGTCCTGCCAATACCTTGATTTTAAG...CATGCATTTTCTAGAATAGAGCTGGGACTTCCCATGTGGCCCACATCTGACCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
CDS-3UTR CAA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTAGATGCCCGGTACTGTaGTCGCCAGCACTCAGGTCT +
Preference number: 5 (lower is better)
Translates to: EALVALVLNNLYKGDYYSRCPVL*SPALRS
Trigger: AGACCTGAGTGCTGGCGACAACAGTACCGGGCATCT...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp CTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCACCAACATGCTGTCTTAAACTCTaGTGCTCAAGTAATCCTCCT +
Preference number: 5 (lower is better)
Translates to: LNTLLAISPDTPTAISPTCCLKL*CSSNPP
Trigger: AGGAGGATTACTTGAGCACAAGAGTTTAAGACAGCA...TGTTGGTGAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTAAACTGGCAGAGAACTaGGTCTGGGGCCATGTAGTG +
Preference number: 5 (lower is better)
Translates to: EALVALVLNNLYKGDYYSKLAEN*VWGHVV
Trigger: CACTACATGGCCCCAGACCAAGTTCTCTGCCAGTTT...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTTTGGAAATCCTGGGGTaGGTTAGTGAAAGCTGGGAG +
Preference number: 5 (lower is better)
Translates to: EALVALVLNNLYKGDYYSLEILG*VSESWE
Trigger: CTCCCAGCTTTCACTAACCAACCCCAGGATTTCCAA...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp TTTGTTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAAGTAAACAATAATCTGTaGTCTGTTTCTGAACCCAGA +
Preference number: 5 (lower is better)
Translates to: FVSLSILYWPYPPIPPQQVNNNL*SVSEPR
Trigger: TCTGGGTTCAGAAACAGACAACAGATTATTGTTTAC...TTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAACAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp TTAGTCTCTCAATACTTTACTGGCCATATCCCCCGATACCCCCACAGCAATTTCGTAAACAATAATCTGTaGTCTGTTTCTGAACCCAGA +
Preference number: 5 (lower is better)
Translates to: LVSQYFTGHIPRYPHSNFVNNNL*SVSEPR
Trigger: TCTGGGTTCAGAAACAGACAACAGATTATTGTTTAC...GAAATTGCTGTGGGGGTATCGGGGGATATGGCCAGTAAAGTATTGAGAGACTAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS-3UTR CAA 90 bp GAGGCACTGGTTGCCCTTGTTCTAAATAATCTTTACAAGGGTGATTATTATAGTGATAGACTAACTTGTTaGCTTCAAAGTCGGATAAGC +
Preference number: 5 (lower is better)
Translates to: EALVALVLNNLYKGDYYSDRLTC*LQSRIS
Trigger: GCTTATCCGACTTTGAAGCAAACAAGTTAGTCTATC...ACTATAATAATCACCCTTGTAAAGATTATTTAGAACAAGGGCAACCAGTGCCTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000232854.9
ENST00000434410.5
CDS CCA 72 bp CCCACCCACCCACCAGCCGGAGAAGCTGCCCCGAACTaGACGCCCGGACGTGCGTGGCCCGTCGCGCGCTCC +
Preference number: 6 (lower is better)
Translates to: PTHPPAGEAAPN*TPGRAWPVARS
Trigger: GGAGCGCGCGACGGGCCACGCACGTCCGGGCGTCCAGTTCGGGGCAGCTTCTCCGGCTGGTGGGTGGGTGGG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS GCA 72 bp GAAAGGCTGCCCCACCCACCCACCAGCCGGAGAAGCTaGCCCGAACTGGACGCCCGGACGTGCGTGGCCCGT +
Preference number: 6 (lower is better)
Translates to: ERLPHPPTSRRS*PELDARTCVAR
Trigger: ACGGGCCACGCACGTCCGGGCGTCCAGTTCGGGGCAGCTTCTCCGGCTGGTGGGTGGGTGGGGCAGCCTTTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000448997.5
CDS GCA 72 bp CTCAGATATAGTTGGTTGCCACCCAGCCGGAGAAGCTaGCCCGAACTGGACGCCCGGACGTGCGTGGCCCGT +
Preference number: 6 (lower is better)
Translates to: LRYSWLPPSRRS*PELDARTCVAR
Trigger: ACGGGCCACGCACGTCCGGGCGTCCAGTTCGGGGCAGCTTCTCCGGCTGGGTGGCAACCAACTATATCTGAG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000455834.5
CDS CCA 72 bp GGGATTTGGCTCCAGCCCAAGGGGATTGCTCCGAGCTaGCGTTTAGGAACCAGGCCGGGAGGTGTGTGGGCG +
Preference number: 6 (lower is better)
Translates to: GIWLQPKGIAPS*RLGTRPGGVWA
Trigger: CGCCCACACACCTCCCGGCCTGGTTCCTAAACGCCAGCTCGGAGCAATCCCCTTGGGCTGGAGCCAAATCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434410.5
CDS GCA 72 bp GAGTCCACCAGACTCCAGAAGCGGCTCTTGCACCAGTaGGCCGTCCCAGGAGCCAAGGCCCGAAGTCAGAAG +
Preference number: 6 (lower is better)
Translates to: ESTRLQKRLLHQ*AVPGAKARSQK
Trigger: CTTCTGACTTCGGGCCTTGGCTCCTGGGACGGCGCACTGGTGCAAGAGCCGCTTCTGGAGTCTGGTGGACTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000482974.1
CDS CAA 90 bp CAGGCAAGACACGAACCCGAGTCCACCAGACTCCAGAAGCGGCTCTaGCACCAGTGCGCCGTCCCAGGAGCCAAGGCCCGAAGTCAGAAG +
Preference number: 6 (lower is better)
Translates to: QARHEPESTRLQKRL*HQCAVPGAKARSQK
Trigger: CTTCTGACTTCGGGCCTTGGCTCCTGGGACGGCGCACTGGTGCAAGAGCCGCTTCTGGAGTCTGGTGGACTCGGGTTCGTGTCTTGCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS CAA 90 bp ATAGTTGGTTGCCACCCCGAGTCCACCAGACTCCAGAAGCGGCTCTaGCACCAGTGCGCCGTCCCAGGAGCCAAGGCCCGAAGTCAGAAG +
Preference number: 6 (lower is better)
Translates to: IVGCHPESTRLQKRL*HQCAVPGAKARSQK
Trigger: CTTCTGACTTCGGGCCTTGGCTCCTGGGACGGCGCACTGGTGCAAGAGCCGCTTCTGGAGTCTGGTGGACTCGGGGTGGCAACCAACTAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000424388.1
CDS GCA 72 bp CTATGGAGAATGGTACCGGCCAGGTCTCCAGGCGGTTaGAGTCGAAACACCCCGTTCCGATCCCCACCTCCC +
Preference number: 6 (lower is better)
Translates to: LWRMVPARSPGG*SRNTPFRSPPP
Trigger: GGGAGGTGGGGATCGGAACGGGGTGTTTCGACTGCAACCGCCTGGAGACCTGGCCGGTACCATTCTCCATAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000482974.1
CDS TCA 72 bp CGACGGCTACTCAGCTCCCGGATACACTGTAGTTGCTaGGAGGTCAAGGGCTGGGTCCAAAGTGCCGGCCTC +
Preference number: 6 (lower is better)
Translates to: RRLLSSRIHCSC*EVKGWVQSAGL
Trigger: GAGGCCGGCACTTTGGACCCAGCCCTTGACCTCTCAGCAACTACAGTGTATCCGGGAGCTGAGTAGCCGTCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000232854.9
ENST00000424388.1
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
ENST00000482974.1
CDS GCA 72 bp AATCACAGCAGGGATTTGGCTCCAGCCCAAGGGGATTaGTCCGAGCTGGCGTTTAGGAACCAGGCCGGGAGG +
Preference number: 6 (lower is better)
Translates to: NHSRDLAPAQGD*SELAFRNQAGR
Trigger: CCTCCCGGCCTGGTTCCTAAACGCCAGCTCGGAGCAATCCCCTTGGGCTGGAGCCAAATCCCTGCTGTGATT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000434410.5
CDS GCA 72 bp GAGAACTGCTTGAACCCAGTTCAAGCAGGCGGAAGTTaGAGCGAGCCGCGGTCATGCCACTGCACTCCAGCC +
Preference number: 6 (lower is better)
Translates to: ENCLNPVQAGGS*SEPRSCHCTPA
Trigger: GGCTGGAGTGCAGTGGCATGACCGCGGCTCGCTGCAACTTCCGCCTGCTTGAACTGGGTTCAAGCAGTTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS CCA 72 bp ATGTCAGCTGCTGAGGTGAGTGCTGAGAGTGGCCCCTaGACCCAGCTGGGTGGAGATGGAGAGGTCACAAGC +
Preference number: 6 (lower is better)
Translates to: MSAAEVSAESGP*TQLGGDGEVTS
Trigger: GCTTGTGACCTCTCCATCTCCACCCAGCTGGGTCCAGGGGCCACTCTCAGCACTCACCTCAGCAGCTGACAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000232854.9
ENST00000424388.1
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
ENST00000482974.1
CDS CAA 72 bp ACTATGGAGAATGGTACCGGCCAGGTCTCCAGGCGGTaGCAGTCGAAACACCCCGTTCCGATCCCCACCTCC +
Preference number: 6 (lower is better)
Translates to: TMENGTGQVSRR*QSKHPVPIPTS
Trigger: GGAGGTGGGGATCGGAACGGGGTGTTTCGACTGCAACCGCCTGGAGACCTGGCCGGTACCATTCTCCATAGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000482974.1
CDS CAA 90 bp CCCATCTGCACTATGGAGAATGGTACCGGCCAGGTCTCCAGGCGGTaGCAGTCGAAACACCCCGTTCCGATCCCCACCTCCCATGCATAC +
Preference number: 6 (lower is better)
Translates to: PICTMENGTGQVSRR*QSKHPVPIPTSHAY
Trigger: GTATGCATGGGAGGTGGGGATCGGAACGGGGTGTTTCGACTGCAACCGCCTGGAGACCTGGCCGGTACCATTCTCCATAGTGCAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000482974.1
CDS GCA 72 bp GATGAGGCCCCCTCTCTCCAACCCTGTTTCCCCATCTaGACTATGGAGAATGGTACCGGCCAGGTCTCCAGG +
Preference number: 6 (lower is better)
Translates to: DEAPSLQPCFPI*TMENGTGQVSR
Trigger: CCTGGAGACCTGGCCGGTACCATTCTCCATAGTGCAGATGGGGAAACAGGGTTGGAGAGAGGGGGCCTCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000424388.1
ENST00000482974.1
CDS GCA 72 bp AGGCCCCCAACCCAGGTGTCTTATGTGGATAATGCCTaGCCAGCACTGGTCTGGAGGCCCAACCCTCTCATC +
Preference number: 6 (lower is better)
Translates to: RPPTQVSYVDNA*PALVWRPNPLI
Trigger: GATGAGAGGGTTGGGCCTCCAGACCAGTGCTGGGCAGGCATTATCCACATAAGACACCTGGGTTGGGGGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS CCA 72 bp CCCAGGTGTCTTATGTGGATAATGCCTGCCCAGCACTaGTCTGGAGGCCCAACCCTCTCATCATCTGGGCCC +
Preference number: 6 (lower is better)
Translates to: PRCLMWIMPAQH*SGGPTLSSSGP
Trigger: GGGCCCAGATGATGAGAGGGTTGGGCCTCCAGACCAGTGCTGGGCAGGCATTATCCACATAAGACACCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS CCA 72 bp GTGTCTTATGTGGATAATGCCTGCCCAGCACTGGTCTaGAGGCCCAACCCTCTCATCATCTGGGCCCAGAGG +
Preference number: 6 (lower is better)
Translates to: VSYVDNACPALV*RPNPLIIWAQR
Trigger: CCTCTGGGCCCAGATGATGAGAGGGTTGGGCCTCCAGACCAGTGCTGGGCAGGCATTATCCACATAAGACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS CCA 72 bp TGGTTACCACCTGGGCCTCAGGGAATGAACAGGAAGTaGGAACAGCACACTCTCCTGACAGCCAGGGCTGAG +
Preference number: 6 (lower is better)
Translates to: WLPPGPQGMNRK*EQHTLLTARAE
Trigger: CTCAGCCCTGGCTGTCAGGAGAGTGTGCTGTTCCCACTTCCTGTTCATTCCCTGAGGCCCAGGTGGTAACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS TCA 72 bp GTCAAGGGCTGGGTCCAAAGTGCCGGCCTCAGGCTCTaGAACTGTCCCCACAGAGAATATAAGTGGCTGGCT +
Preference number: 6 (lower is better)
Translates to: VKGWVQSAGLRL*NCPHREYKWLA
Trigger: AGCCAGCCACTTATATTCTCTGTGGGGACAGTTTCAGAGCCTGAGGCCGGCACTTTGGACCCAGCCCTTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS CCA 72 bp GGAGAGGTCACAAGCTCTGGTGCCCCAAAATGGCTCTaGTCCTCAGATATAGTTGGTTGCCACCCTGCCGGT +
Preference number: 6 (lower is better)
Translates to: GEVTSSGAPKWL*SSDIVGCHPAG
Trigger: ACCGGCAGGGTGGCAACCAACTATATCTGAGGACCAGAGCCATTTTGGGGCACCAGAGCTTGTGACCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000434410.5
CDS CCA 72 bp GGAGAGGTCACAAGCTCTGGTGCCCCAAAATGGCTCTaGTCCTCAGATATAGTTGGTTGCCACCCAGCCGGA +
Preference number: 6 (lower is better)
Translates to: GEVTSSGAPKWL*SSDIVGCHPAG
Trigger: TCCGGCTGGGTGGCAACCAACTATATCTGAGGACCAGAGCCATTTTGGGGCACCAGAGCTTGTGACCTCTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455834.5
CDS CAA 90 bp GTGCCACATCTTCAGATACAAGTAGGGTCAGAGAAGGGAAGCGACTaGCCCAGCGTCACTCAGGTAGAAACTGTCCCAGGCAAGCTGGGC +
Preference number: 6 (lower is better)
Translates to: VPHLQIQVGSEKGSD*PSVTQVETVPGKLG
Trigger: GCCCAGCTTGCCTGGGACAGTTTCTACCTGAGTGACGCTGGGCAAGTCGCTTCCCTTCTCTGACCCTACTTGTATCTGAAGATGTGGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS TCA 72 bp GGATACCCCTCTTCTCAAAGACCCCAGTCCAGTGGCTaGCCAGTTCTATGGCACTGGATAACCCAGCCAGAG +
Preference number: 6 (lower is better)
Translates to: GYPSSQRPQSSG*PVLWHWITQPE
Trigger: CTCTGGCTGGGTTATCCAGTGCCATAGAACTGGTCAGCCACTGGACTGGGGTCTTTGAGAAGAGGGGTATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000232854.9
ENST00000424388.1
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
ENST00000482974.1
CDS CCA 72 bp TCAGGGATACCCCTCTTCTCAAAGACCCCAGTCCAGTaGCTGACCAGTTCTATGGCACTGGATAACCCAGCC +
Preference number: 6 (lower is better)
Translates to: SGIPLFSKTPVQ*LTSSMALDNPA
Trigger: GGCTGGGTTATCCAGTGCCATAGAACTGGTCAGCCACTGGACTGGGGTCTTTGAGAAGAGGGGTATCCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000232854.9
ENST00000424388.1
ENST00000434410.5
ENST00000448997.5
ENST00000455834.5
ENST00000482974.1
CDS CCA 72 bp GGAGATGGAGAGGTCACAAGCTCTGGTGCCCCAAAATaGCTCTGGTCCTCAGATATAGTTGGTTGCCACCCC +
Preference number: 6 (lower is better)
Translates to: GDGEVTSSGAPK*LWSSDIVGCHP
Trigger: GGGGTGGCAACCAACTATATCTGAGGACCAGAGCCATTTTGGGGCACCAGAGCTTGTGACCTCTCCATCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000424388.1
CDS CCA 72 bp GGAGAGGTCACAAGCTCTGGTGCCCCAAAATGGCTCTaGTCCTCAGATATAGTTGGTTGCCACCCTGGGAGT +
Preference number: 6 (lower is better)
Translates to: GEVTSSGAPKWL*SSDIVGCHPGS
Trigger: ACTCCCAGGGTGGCAACCAACTATATCTGAGGACCAGAGCCATTTTGGGGCACCAGAGCTTGTGACCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS CCA 72 bp GGAGATGGAGAGGTCACAAGCTCTGGTGCCCCAAAATaGCTCTGGTCCTCAGATATAGTTGGTTGCCACCCT +
Preference number: 6 (lower is better)
Translates to: GDGEVTSSGAPK*LWSSDIVGCHP
Trigger: AGGGTGGCAACCAACTATATCTGAGGACCAGAGCCATTTTGGGGCACCAGAGCTTGTGACCTCTCCATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000448997.5
ENST00000482974.1
CDS CCA 72 bp TTTTGGCTCCAAGGACATGAGCCACGATGTACTCACTaGATTCCCGGGCCTCAGGGATACCCCTCTTCTCAA +
Preference number: 6 (lower is better)
Translates to: FWLQGHEPRCTH*IPGPQGYPSSQ
Trigger: TTGAGAAGAGGGGTATCCCTGAGGCCCGGGAATCCAGTGAGTACATCGTGGCTCATGTCCTTGGAGCCAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000232854.9
ENST00000434410.5
ENST00000455834.5
ENST00000482974.1
CDS CCA 72 bp GGAGATGGAGAGGTCACAAGCTCTGGTGCCCCAAAATaGCTCTGGTCCTCAGATATAGTTGGTTGCCACCCA +
Preference number: 6 (lower is better)
Translates to: GDGEVTSSGAPK*LWSSDIVGCHP
Trigger: TGGGTGGCAACCAACTATATCTGAGGACCAGAGCCATTTTGGGGCACCAGAGCTTGTGACCTCTCCATCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000455834.5
CDS CAA 72 bp CTTCAGATACAAGTAGGGTCAGAGAAGGGAAGCGACTaGCCCAGCGTCACTCAGGTAGAAACTGTCCCAGGC +
Preference number: 6 (lower is better)
Translates to: LQIQVGSEKGSD*PSVTQVETVPG
Trigger: GCCTGGGACAGTTTCTACCTGAGTGACGCTGGGCAAGTCGCTTCCCTTCTCTGACCCTACTTGTATCTGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS TCA 72 bp ACAACACTAAACTTAACTGTTTTGGCTCCAAGGACATaGGCCACGATGTACTCACTGGATTCCCGGGCCTCA +
Preference number: 6 (lower is better)
Translates to: TTLNLTVLAPRT*ATMYSLDSRAS
Trigger: TGAGGCCCGGGAATCCAGTGAGTACATCGTGGCTCATGTCCTTGGAGCCAAAACAGTTAAGTTTAGTGTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS TCA 72 bp ACTTACGTTTTCTTCACATTTTTAGCTGGAGTGGGCTaGGCCCATAGCTCAGTCTCTGCTAATAAACGGGTT +
Preference number: 6 (lower is better)
Translates to: TYVFFTFLAGVG*AHSSVSANKRV
Trigger: AACCCGTTTATTAGCAGAGACTGAGCTATGGGCTCAGCCCACTCCAGCTAAAAATGTGAAGAAAACGTAAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000482974.1
CDS TCA 72 bp AATTGTATATTTAAAGAGGTCACAAGCAAGTTTAACTaGAGGTTTAAAATCAGCGGTCCCCTTTGCTTCCAG +
Preference number: 6 (lower is better)
Translates to: NCIFKEVTSKFN*RFKISGPLCFQ
Trigger: CTGGAAGCAAAGGGGACCGCTGATTTTAAACCTTCAGTTAAACTTGCTTGTGACCTCTTTAAATATACAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482974.1