RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HELZ (Homo sapiens)

Ensembl gene IDs: ENSG00000198265

Ensembl transcript IDs: ENST00000358691.10, ENST00000417253.7, ENST00000578783.1, ENST00000578938.1, ENST00000579861.1, ENST00000579953.5, ENST00000580168.5, ENST00000580662.5, ENST00000580963.1, ENST00000581159.5, ENST00000582864.1, ENST00000584641.5

Found 911 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp AGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGGGGCCTGGGCTTTaGAGGGGCCCGCAGAGCGCTGGCATAGGACATGGCGGGCTTGCC +
Preference number: 1 (lower is better)
Translates to: RVATLLGLLRRGPGL*RGPQSAGIGHGGLA
Trigger: GGCAAGCCCGCCATGTCCTATGCCAGCGCTCTGCGGGCCCCTCCAAAGCCCAGGCCCCCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR GCA 90 bp CTCAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTaGTCAGGAGGGGGCCTGGGCTTTGGAGGGGCCCGCAGAGCGCTG +
Preference number: 1 (lower is better)
Translates to: LSSWKRDRGSLLFLA*SGGGLGFGGARRAL
Trigger: CAGCGCTCTGCGGGCCCCTCCAAAGCCCAGGCCCCCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CCA 90 bp CTAGGCTCAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTaGCCTGCTCAGGAGGGGGCCTGGGCTTTGGAGGGGCCCGCAGAG +
Preference number: 1 (lower is better)
Translates to: LGSVPGRETEGRYSS*PAQEGAWALEGPAE
Trigger: CTCTGCGGGCCCCTCCAAAGCCCAGGCCCCCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTGAGCCTAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR TCA 90 bp GGAGGTGAGGATGGTGATGGTGTGGGTATGGAGCGCTGCCCTGACTaGGAAAGGCATGATGCTCGCTCCACTGCTGGAACCGTGCCTGCT +
Preference number: 1 (lower is better)
Translates to: GGEDGDGVGMERCPD*ERHDARSTAGTVPA
Trigger: AGCAGGCACGGTTCCAGCAGTGGAGCGAGCATCATGCCTTTCTCAGTCAGGGCAGCGCTCCATACCCACACCATCACCATCCTCACCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR GCA 90 bp ATGGGGCCGGGTTGTGCAATGGCTCTCAGAGGACTGTGGCCTTCTTaGAGCATGGGAGGGGGCTGCTGCTCCGGAATTACAGCTTCTGCA +
Preference number: 1 (lower is better)
Translates to: MGPGCAMALRGLWPS*SMGGGCCSGITASA
Trigger: TGCAGAAGCTGTAATTCCGGAGCAGCAGCCCCCTCCCATGCTGCAAGAAGGCCACAGTCCTCTGAGAGCCATTGCACAACCCGGCCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR GCA 90 bp CCCGCAGAGCTCTGGGGGCTACTGCTATTGGCCGACTCCGCGATCTaGTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGATGCTGCAGC +
Preference number: 1 (lower is better)
Translates to: PAELWGLLLLADSAI*LLGIRGGNWPRCCS
Trigger: GCTGCAGCATCTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCCCCAGAGCTCTGCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR TCA 90 bp GAAACCTTGAGTATGTGGTCTCCACTTCATCTTCGGCACTGCTGGTaGGCTTCCAGTCTGCCCTCACTGGCGGCTGATGTAATCCCAGGG +
Preference number: 1 (lower is better)
Translates to: ETLSMWSPLHLRHCW*ASSLPSLAADVIPG
Trigger: CCCTGGGATTACATCAGCCGCCAGTGAGGGCAGACTGGAAGCTCACCAGCAGTGCCGAAGATGAAGTGGAGACCACATACTCAAGGTTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR TCA 90 bp TTTCAAGGGAGGAGGGGCAAGGTGTTCAGATGGCAACGAGAAAGGTaGGTTGAATATCTGGGGTGGGAGGCGCTGTGGAAATGCTGGGTT +
Preference number: 1 (lower is better)
Translates to: FQGRRGKVFRWQRER*VEYLGWEALWKCWV
Trigger: AACCCAGCATTTCCACAGCGCCTCCCACCCCAGATATTCAACTCACCTTTCTCGTTGCCATCTGAACACCTTGCCCCTCCTCCCTTGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CCA 90 bp ACTGCTATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTaGAAACTGGCCAAGATGCTGCAGCACACTGTAGTTGAAGGAACT +
Preference number: 1 (lower is better)
Translates to: TAIGRLRDLLVRHKG*KLAKMLQHTVVEGT
Trigger: AGTTCCTTCAACTACAGTGTGCTGCAGCATCTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAATAGCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CCA 90 bp ATCCTTCTCCTGATGCTGATTTTGTGGCTGGCCTATGGTGACAGGTaGGTGATGTCCAAGGCCATAAGGAATAGGAGATCCTCGTCCATG +
Preference number: 1 (lower is better)
Translates to: ILLLMLILWLAYGDR*VMSKAIRNRRSSSM
Trigger: CATGGACGAGGATCTCCTATTCCTTATGGCCTTGGACATCACCCACCTGTCACCATAGGCCAGCCACAAAATCAGCATCAGGAGAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CCA 90 bp GGACTCCTGCACTTAGTGCCTCGATACATGCTAGGTGCACTCTCATaGCATTCTGATGGCTTCTTTCCAGGATTCTCACTTCCATGCATG +
Preference number: 1 (lower is better)
Translates to: GLLHLVPRYMLGALS*HSDGFFPGFSLPCM
Trigger: CATGCATGGAAGTGAGAATCCTGGAAAGAAGCCATCAGAATGCCATGAGAGTGCACCTAGCATGTATCGAGGCACTAAGTGCAGGAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 90 bp GTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTaGAAATGCAAATCATCAGGCTCCAGACCAAAATCAGAAATGCTG +
Preference number: 1 (lower is better)
Translates to: VWFLDWQHQHRLETC*KCKSSGSRPKSEML
Trigger: CAGCATTTCTGATTTTGGTCTGGAGCCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR TCA 90 bp GCACTTAGTGCCTCGATACATGCTAGGTGCACTCTCATGGCATTCTaGTGGCTTCTTTCCAGGATTCTCACTTCCATGCATGTGGATCAA +
Preference number: 1 (lower is better)
Translates to: ALSASIHARCTLMAF*WLLSRILTSMHVDQ
Trigger: TTGATCCACATGCATGGAAGTGAGAATCCTGGAAAGAAGCCATCAGAATGCCATGAGAGTGCACCTAGCATGTATCGAGGCACTAAGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR TCA 90 bp TGGATTTATGAAAATCCAGGACCCTTCCTCTGTAAAGGGGGAGGCTaGGAAACATTCTCAGCTGCACTGACACTTTGGGACTTCAACCAG +
Preference number: 1 (lower is better)
Translates to: WIYENPGPFLCKGGG*ETFSAALTLWDFNQ
Trigger: CTGGTTGAAGTCCCAAAGTGTCAGTGCAGCTGAGAATGTTTCTCAGCCTCCCCCTTTACAGAGGAAGGGTCCTGGATTTTCATAAATCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR GCA 90 bp TTCCATGCATGTGGATCAAGATTGACCCTAAGCACACCAAACAAATaGACAGCTTCCAGACTGATGTCCAGGCAGCAGCGTACACAAAAG +
Preference number: 1 (lower is better)
Translates to: FHACGSRLTLSTPNK*TASRLMSRQQRTQK
Trigger: CTTTTGTGTACGCTGCTGCCTGGACATCAGTCTGGAAGCTGTGCATTTGTTTGGTGTGCTTAGGGTCAATCTTGATCCACATGCATGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 90 bp AGCAGAAAGGTAGAGCTGAATACAAGAGGCACGCAGCGCTTATCCTaGAGCTTGCTAACCATTAACCAAAGGCACTCTTTTATCCCAAAC +
Preference number: 1 (lower is better)
Translates to: SRKVELNTRGTQRLS*SLLTINQRHSFIPN
Trigger: GTTTGGGATAAAAGAGTGCCTTTGGTTAATGGTTAGCAAGCTCCAGGATAAGCGCTGCGTGCCTCTTGTATTCAGCTCTACCTTTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 90 bp GTGAGGATCTATTCTTTGAACAGGGCTTGGAGATTTTCCCAAATTTaGGTGAGGTCCAAGAGGGGGTGGAGGAGTATATGCTCTAATAGG +
Preference number: 1 (lower is better)
Translates to: VRIYSLNRAWRFSQI*VRSKRGWRSICSNR
Trigger: CCTATTAGAGCATATACTCCTCCACCCCCTCTTGGACCTCACCCAAATTTGGGAAAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CCA 90 bp GTTATCATTAAAGTTAGAAAAGTGGCTACTGTGGTCTGTACTGGATaGGGGAGATGGGACTGCTGGTGGGCTTCTACTCTGTACTTGTCT +
Preference number: 1 (lower is better)
Translates to: VIIKVRKVATVVCTG*GRWDCWWASTLYLS
Trigger: AGACAAGTACAGAGTAGAAGCCCACCAGCAGTCCCATCTCCCCCATCCAGTACAGACCACAGTAGCCACTTTTCTAACTTTAATGATAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CCA 90 bp TCAATGTCTCTGCTGTTATCATTAAAGTTAGAAAAGTGGCTACTGTaGTCTGTACTGGATGGGGGAGATGGGACTGCTGGTGGGCTTCTA +
Preference number: 1 (lower is better)
Translates to: SMSLLLSLKLEKWLL*SVLDGGDGTAGGLL
Trigger: TAGAAGCCCACCAGCAGTCCCATCTCCCCCATCCAGTACAGACCACAGTAGCCACTTTTCTAACTTTAATGATAACAGCAGAGACATTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR TCA 90 bp AGCTGCACTGACACTTTGGGACTTCAACCAGGACAAAGAGCCCTCTaGCCTACTGAAAGATATAAAGAGGTCTTCGCATACAAGTTATCG +
Preference number: 1 (lower is better)
Translates to: SCTDTLGLQPGQRAL*PTERYKEVFAYKLS
Trigger: CGATAACTTGTATGCGAAGACCTCTTTATATCTTTCAGTAGGTCAGAGGGCTCTTTGTCCTGGTTGAAGTCCCAAAGTGTCAGTGCAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR GCA 90 bp CTCTCATGGCATTCTGATGGCTTCTTTCCAGGATTCTCACTTCCATaGATGTGGATCAAGATTGACCCTAAGCACACCAAACAAATGCAC +
Preference number: 1 (lower is better)
Translates to: LSWHSDGFFPGFSLP*MWIKIDPKHTKQMH
Trigger: GTGCATTTGTTTGGTGTGCTTAGGGTCAATCTTGATCCACATGCATGGAAGTGAGAATCCTGGAAAGAAGCCATCAGAATGCCATGAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 90 bp TGGCATTCTGATGGCTTCTTTCCAGGATTCTCACTTCCATGCATGTaGATCAAGATTGACCCTAAGCACACCAAACAAATGCACAGCTTC +
Preference number: 1 (lower is better)
Translates to: WHSDGFFPGFSLPCM*IKIDPKHTKQMHSF
Trigger: GAAGCTGTGCATTTGTTTGGTGTGCTTAGGGTCAATCTTGATCCACATGCATGGAAGTGAGAATCCTGGAAAGAAGCCATCAGAATGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 90 bp CTGAGGCTGCTGATTCAACTGACTTTGCTGCTGGACTACCTGATTTaGCTGAGGTGGTATCTGATTTGGTTGTTCAGGCAAATTATTCTG +
Preference number: 1 (lower is better)
Translates to: LRLLIQLTLLLDYLI*LRWYLIWLFRQIIL
Trigger: CAGAATAATTTGCCTGAACAACCAAATCAGATACCACCTCAGCCAAATCAGGTAGTCCAGCAGCAAAGTCAGTTGAATCAGCAGCCTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR TCA 90 bp ATGGAAGCAGCGTTAGAATCCTTGACTGGCTATGGAAATAAGGAATaGGAAGTACTCATATACTCACAGCAGAGCGGTGGGCCAATAAGT +
Preference number: 1 (lower is better)
Translates to: MEAALESLTGYGNKE*EVLIYSQQSGGPIS
Trigger: ACTTATTGGCCCACCGCTCTGCTGTGAGTATATGAGTACTTCTCATTCCTTATTTCCATAGCCAGTCAAGGATTCTAACGCTGCTTCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 90 bp CTGATTCAACTGACTTTGCTGCTGGACTACCTGATTTGGCTGAGGTaGTATCTGATTTGGTTGTTCAGGCAAATTATTCTGCTGCTGATT +
Preference number: 1 (lower is better)
Translates to: LIQLTLLLDYLIWLR*YLIWLFRQIILLLI
Trigger: AATCAGCAGCAGAATAATTTGCCTGAACAACCAAATCAGATACCACCTCAGCCAAATCAGGTAGTCCAGCAGCAAAGTCAGTTGAATCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CCA 90 bp AGATACAGTACAATGTCATATACATGGATTTATAGGAAGCAGGCATaGTCTGGATTTATGAAAATCCAGGACCCTTCCTCTGTAAAGGGG +
Preference number: 1 (lower is better)
Translates to: RYSTMSYTWIYRKQA*SGFMKIQDPSSVKG
Trigger: CCCCTTTACAGAGGAAGGGTCCTGGATTTTCATAAATCCAGACCATGCCTGCTTCCTATAAATCCATGTATATGACATTGTACTGTATCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR TCA 90 bp AACACCTGCTGGCATGGCAGAGAATCTAAAATAACTTTGTTAACCTaGGAAACACATAATTTGAAAAACAAATCCTTTGCCCTCACCACC +
Preference number: 1 (lower is better)
Translates to: NTCWHGRESKITLLT*ETHNLKNKSFALTT
Trigger: GGTGGTGAGGGCAAAGGATTTGTTTTTCAAATTATGTGTTTCTCAGGTTAACAAAGTTATTTTAGATTCTCTGCCATGCCAGCAGGTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 90 bp CAGATGACTGGCACAGAAATCAGATACAGTACAATGTCATATACATaGATTTATAGGAAGCAGGCATGGTCTGGATTTATGAAAATCCAG +
Preference number: 1 (lower is better)
Translates to: QMTGTEIRYSTMSYT*IYRKQAWSGFMKIQ
Trigger: CTGGATTTTCATAAATCCAGACCATGCCTGCTTCCTATAAATCCATGTATATGACATTGTACTGTATCTGATTTCTGTGCCAGTCATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR TCA 90 bp CAGCTGTACTCAGAAGACACGCCTCATTTTGATGGAAACTTGCAATaGTTCTTACACAAGACGTGTTCAAAATGTTATAAGATACTATGC +
Preference number: 1 (lower is better)
Translates to: QLYSEDTPHFDGNLQ*FLHKTCSKCYKILC
Trigger: GCATAGTATCTTATAACATTTTGAACACGTCTTGTGTAAGAATCATTGCAAGTTTCCATCAAAATGAGGCGTGTCTTCTGAGTACAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR GCA 90 bp AACATCAGCTGTACTCAGAAGACACGCCTCATTTTGATGGAAACTTaGAATGATTCTTACACAAGACGTGTTCAAAATGTTATAAGATAC +
Preference number: 1 (lower is better)
Translates to: NISCTQKTRLILMET*NDSYTRRVQNVIRY
Trigger: GTATCTTATAACATTTTGAACACGTCTTGTGTAAGAATCATTGCAAGTTTCCATCAAAATGAGGCGTGTCTTCTGAGTACAGCTGATGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 90 bp GAAGGACTGTGTCTTAAGAAAACTCCAAAGCTGTATATTCTACGATaGTCTTCACGTGTACTTTTACACCTAAGTCATTCTGTATTCTAT +
Preference number: 1 (lower is better)
Translates to: EGLCLKKTPKLYILR*SSRVLLHLSHSVFY
Trigger: ATAGAATACAGAATGACTTAGGTGTAAAAGTACACGTGAAGACCATCGTAGAATATACAGCTTTGGAGTTTTCTTAAGACACAGTCCTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR TCA 90 bp AATTCTCAAATCTTAAAACAGGACAGATCTGTAAATAGTACTATGTaGCTTCTACTCTGTGTTGCAACCTATGTAATTTGCCACCCTTTC +
Preference number: 1 (lower is better)
Translates to: NSQILKQDRSVNSTM*LLLCVATYVICHPF
Trigger: GAAAGGGTGGCAAATTACATAGGTTGCAACACAGAGTAGAAGTCACATAGTACTATTTACAGATCTGTCCTGTTTTAAGATTTGAGAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 90 bp AAATGTTATAAGATACTATGCGTAAAGAGCAGGTTCTTTAAAGCATaGTTGGAAAGATGGCATTATGTAATGCTGAGGAAGAGTAAGCTT +
Preference number: 1 (lower is better)
Translates to: KCYKILCVKSRFFKA*LERWHYVMLRKSKL
Trigger: AAGCTTACTCTTCCTCAGCATTACATAATGCCATCTTTCCAACCATGCTTTAAAGAACCTGCTCTTTACGCATAGTATCTTATAACATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp AGGAGGGGGCCTGGGCTTTGGAGGGGCCCGCAGAGCGCTGGCATAGGACATGGCACTGGATGGGGGAGATaGGACTGCTGGTGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: RRGPGLWRGPQSAGIGHGTGWGR*DCWWAS
Trigger: AGAAGCCCACCAGCAGTCCCATCTCCCCCATCCAGT...GCCATGTCCTATGCCAGCGCTCTGCGGGCCCCTCCAAAGCCCAGGCCCCCTCCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp AGGAGGGGGCCTGGGCTTTGGAGGGGCCCGCAGAGCGCTGGCATAGGACATGGCGCTCTCAGAGGACTGTaGCCTTCTTGCAGCATGGGA +
Preference number: 2 (lower is better)
Translates to: RRGPGLWRGPQSAGIGHGALRGL*PSCSMG
Trigger: TCCCATGCTGCAAGAAGGCCACAGTCCTCTGAGAGC...GCCATGTCCTATGCCAGCGCTCTGCGGGCCCCTCCAAAGCCCAGGCCCCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR GCA 90 bp GCTTCCAGTCTGCCCTCACTGGCGGCTGATGTAATCCCAGGGGCGGCTGAGGAAGGACTGTGGCCTTCTTaGAGCATGGGAGGGGGCTGC +
Preference number: 2 (lower is better)
Translates to: ASSLPSLAADVIPGAAEEGLWPS*SMGGGC
Trigger: GCAGCCCCCTCCCATGCTGCAAGAAGGCCACAGTCC...TTCCTCAGCCGCCCCTGGGATTACATCAGCCGCCAGTGAGGGCAGACTGGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp AGGAGGGGGCCTGGGCTTTGGAGGGGCCCGCAGAGCGCTGGCATAGGACATGGCGCGCTGTGGAAATGCTaGGTTGCTGGCTACTTCAAT +
Preference number: 2 (lower is better)
Translates to: RRGPGLWRGPQSAGIGHGALWKC*VAGYFN
Trigger: ATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGC...GCCATGTCCTATGCCAGCGCTCTGCGGGCCCCTCCAAAGCCCAGGCCCCCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp GGGCTACTGCTATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAGGGTGGGAGGCGCTGTaGAAATGCTGGGTTGCTGGC +
Preference number: 2 (lower is better)
Translates to: GLLLLADSAICLLGIRGGGWEAL*KCWVAG
Trigger: GCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCC...TCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp GGGCTACTGCTATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAGGCCGGGTTGTGCAATaGCTCTCAGAGGACTGTGGC +
Preference number: 2 (lower is better)
Translates to: GLLLLADSAICLLGIRGGGRVVQ*LSEDCG
Trigger: GCCACAGTCCTCTGAGAGCCATTGCACAACCCGGCC...TCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CAA 90 bp GCAGAGCTCTGGGGGCTACTGCTATTGGCCGACTCCGCGATCTGCTaGTTAGGCATAAGGGGTGGAAACTGGCCAAGATGCTGCAGCACA +
Preference number: 2 (lower is better)
Translates to: AELWGLLLLADSAIC*LGIRGGNWPRCCST
Trigger: TGTGCTGCAGCATCTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCCCCAGAGCTCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR GCA 90 bp GTGTGGGTATGGAGCGCTGCCCTGACTGAGAAAGGCATGATGCTCGCTCCACTGGTGGCGATTAGGGATTaGATACTGTGCGTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: VWVWSAALTEKGMMLAPLVAIRD*ILCVGS
Trigger: GCTCCCCACGCACAGTATGCAATCCCTAATCGCCAC...CAGTGGAGCGAGCATCATGCCTTTCTCAGTCAGGGCAGCGCTCCATACCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp GGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCTCTGCTGCAGGAGGAGACTGTaGCCGATGAGCAACTGCACT +
Preference number: 2 (lower is better)
Translates to: GVGGAVEMLGCWLLQCLCCRRRL*PMSNCT
Trigger: AGTGCAGTTGCTCATCGGCCACAGTCTCCTCCTGCA...GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR GCA 90 bp GTGTGGGTATGGAGCGCTGCCCTGACTGAGAAAGGCATGATGCTCGCTCCACTGAACCGTGCCTGCTGCTaGCTTAATGTTTCCAGAGCG +
Preference number: 2 (lower is better)
Translates to: VWVWSAALTEKGMMLAPLNRACC*LNVSRA
Trigger: CGCTCTGGAAACATTAAGGCAGCAGCAGGCACGGTT...CAGTGGAGCGAGCATCATGCCTTTCTCAGTCAGGGCAGCGCTCCATACCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR GCA 90 bp GGACACCTCGAGGTTCTCCGACTTCAGTTGATCCTCAGGGGGTTTGACAGTCTTGGTGAGCTTCCAGTCTaGCCTCACTGGCGGCTGATG +
Preference number: 2 (lower is better)
Translates to: GHLEVLRLQLILRGFDSLGELPV*PHWRLM
Trigger: CATCAGCCGCCAGTGAGGGCAGACTGGAAGCTCACC...AAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp GCTTCCAGTCTGCCCTCACTGGCGGCTGATGTAATCCCAGGGGCGGCTGAGGAAAGGTCCAAGAGGGGGTaGAGGAGTATATGCTCTAAT +
Preference number: 2 (lower is better)
Translates to: ASSLPSLAADVIPGAAEERSKRG*RSICSN
Trigger: ATTAGAGCATATACTCCTCCACCCCCTCTTGGACCT...TTCCTCAGCCGCCCCTGGGATTACATCAGCCGCCAGTGAGGGCAGACTGGAAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp GGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCTCTGCGCCTATGGTGACAGGTaGGTGATGTCCAAGGCCATA +
Preference number: 2 (lower is better)
Translates to: GVGGAVEMLGCWLLQCLCAYGDR*VMSKAI
Trigger: TATGGCCTTGGACATCACCCACCTGTCACCATAGGC...GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGGCGCTATCAACTCTCTaGGCTGAGCTGTCCTGCTGG +
Preference number: 2 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKALSTL*AELSCW
Trigger: CCAGCAGGACAGCTCAGCCCAGAGAGTTGATAGCGC...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR TCA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGGCAGCACACTGTAGTTaGAGGAACTGGACACCTCGA +
Preference number: 2 (lower is better)
Translates to: QFLEERQRVATLLGLLRRAAHCS*RNWTPR
Trigger: TCGAGGTGTCCAGTTCCTTCAACTACAGTGTGCTGC...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp GGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCTCTGCCAAGGTGTGCTGCTGTaGAATTGGAAAGGGTGGTCT +
Preference number: 2 (lower is better)
Translates to: GVGGAVEMLGCWLLQCLCQGVLL*NWKGWS
Trigger: AGACCACCCTTTCCAATTCCACAGCAGCACACCTTG...GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR TCA 90 bp GGGCTGCTGCTCCGGAATTACAGCTTCTGCAGGAGGAGACTGTGGCCGATGAGCACAGAAGGATTGGGCTaGACAATTCCATCATTCTGG +
Preference number: 2 (lower is better)
Translates to: GLLLRNYSFCRRRLWPMSTEGLG*TIPSFW
Trigger: CCAGAATGATGGAATTGTTCAGCCCAATCCTTCTGT...GCTCATCGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCGGAGCAGCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR TCA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGGAAGCTATTCAGATGTaGAGGAAGAATGGGGCCGGG +
Preference number: 2 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKEAIQM*RKNGAG
Trigger: CCCGGCCCCATTCTTCCTTCACATCTGAATAGCTTC...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR TCA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGTTCTCCGACTTCAGTTaGTCCTCAGGGGGTTTGACA +
Preference number: 2 (lower is better)
Translates to: QFLEERQRVATLLGLLRRFSDFS*SSGGLT
Trigger: TGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAA...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR GCA 90 bp ATATCTGGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCGGAATTACAGCTTCTaGAGGAGGAGACTGTGGCCG +
Preference number: 2 (lower is better)
Translates to: ISGVGGAVEMLGCWLLQCRNYSF*RRRLWP
Trigger: CGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCG...ACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCCAGATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGTACTGTGGTCTGTACTaGATGGGGGAGATGGGACTG +
Preference number: 2 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKYCGLY*MGEMGL
Trigger: CAGTCCCATCTCCCCCATCCAGTACAGACCACAGTA...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGGAAAAGTGGCTACTGTaGTCTGTACTGGATGGGGGA +
Preference number: 2 (lower is better)
Translates to: QFLEERQRVATLLGLLRREKWLL*SVLDGG
Trigger: TCCCCCATCCAGTACAGACCACAGTAGCCACTTTTC...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp GGACACCTCGAGGTTCTCCGACTTCAGTTGATCCTCAGGGGGTTTGACAGTCTTGGTGAGTTGAATATCTaGGGTGGGAGGCGCTGTGGA +
Preference number: 2 (lower is better)
Translates to: GHLEVLRLQLILRGFDSLGELNI*GGRRCG
Trigger: TCCACAGCGCCTCCCACCCCAGATATTCAACTCACC...AAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR TCA 90 bp GGGCTACTGCTATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAGGAGACTGTGGCCGATaGGCAACTGCACTATTAAAA +
Preference number: 2 (lower is better)
Translates to: GLLLLADSAICLLGIRGGGDCGR*ATALLK
Trigger: TTTTAATAGTGCAGTTGCTCATCGGCCACAGTCTCC...TCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR GCA 90 bp GTGTGGGTATGGAGCGCTGCCCTGACTGAGAAAGGCATGATGCTCGCTCCACTGAATTCGAGGATCAACTaGAAACCTACCCTGGTATCC +
Preference number: 2 (lower is better)
Translates to: VWVWSAALTEKGMMLAPLNSRIN*KPTLVS
Trigger: GGATACCAGGGTAGGTTTGCAGTTGATCCTCGAATT...CAGTGGAGCGAGCATCATGCCTTTCTCAGTCAGGGCAGCGCTCCATACCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR GCA 90 bp CTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGATGCTGCAGCACACTGTAAATGGGGCCGGGTTGTaGAATGGCTCTCAGAGGACT +
Preference number: 2 (lower is better)
Translates to: LLVRHKGWKLAKMLQHTVNGAGL*NGSQRT
Trigger: AGTCCTCTGAGAGCCATTGCACAACCCGGCCCCATT...TACAGTGTGCTGCAGCATCTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR GCA 90 bp ATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTGAGCGTGGAAATGCTGGGTTaGTGGCTACTTCAATGTCTC +
Preference number: 2 (lower is better)
Translates to: ILRGFDSLGWRYQLSGLSVEMLG*WLLQCL
Trigger: GAGACATTGAAGTAGCCAGCAACCCAGCATTTCCAC...GCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp GGGCTGCTGCTCCGGAATTACAGCTTCTGCAGGAGGAGACTGTGGCCGATGAGCCTGTTTTGGTTCTGTTaGCTTTTTCTCTGGTGTTCG +
Preference number: 2 (lower is better)
Translates to: GLLLRNYSFCRRRLWPMSLFWFC*LFLWCS
Trigger: CGAACACCAGAGAAAAAGCCAACAGAACCAAAACAG...GCTCATCGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCGGAGCAGCAGCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CAA 90 bp ACTGTAGTTGAAGGAACTGGACACCTCGAGGTTCTCCGACTTCAGTaGATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTC +
Preference number: 2 (lower is better)
Translates to: TVVEGTGHLEVLRLQ*ILRGFDSLGWRYQL
Trigger: GAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCCAGTTCCTTCAACTACAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR TCA 90 bp GTGTGGGTATGGAGCGCTGCCCTGACTGAGAAAGGCATGATGCTCGCTCCACTGAGGGGTTCTCATCAATaGAGCTATTCAGATGTGAAG +
Preference number: 2 (lower is better)
Translates to: VWVWSAALTEKGMMLAPLRGSHQ*SYSDVK
Trigger: CTTCACATCTGAATAGCTTCATTGATGAGAACCCCT...CAGTGGAGCGAGCATCATGCCTTTCTCAGTCAGGGCAGCGCTCCATACCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR GCA 90 bp ATATCTGGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTACTAAACAAGCTCCTTaGAGAAACCGCTTGCCGCCA +
Preference number: 2 (lower is better)
Translates to: ISGVGGAVEMLGCWLLQCTKQAP*RNRLPP
Trigger: TGGCGGCAAGCGGTTTCTGCAAGGAGCTTGTTTAGT...ACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCCAGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGACTGCAAACCTACCCTaGTATCCTGTCCATGGTACA +
Preference number: 2 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKTANLP*YPVHGT
Trigger: TGTACCATGGACAGGATACCAGGGTAGGTTTGCAGT...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp ATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTGAGCCTGGACTACCTGATTTaGCTGAGGTGGTATCTGATT +
Preference number: 2 (lower is better)
Translates to: ILRGFDSLGWRYQLSGLSLDYLI*LRWYLI
Trigger: AATCAGATACCACCTCAGCCAAATCAGGTAGTCCAG...GCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR TCA 90 bp GGACACCTCGAGGTTCTCCGACTTCAGTTGATCCTCAGGGGGTTTGACAGTCTTCCAGGACTCCGGGGATaGAAAGTTGAAAGAAGATTG +
Preference number: 2 (lower is better)
Translates to: GHLEVLRLQLILRGFDSLPGLRG*KVERRL
Trigger: CAATCTTCTTTCAACTTTTCATCCCCGGAGTCCTGG...AAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR GCA 90 bp GGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCTCTGCGTTATAGGCCATTGCTaGCTGATGTGTAATAATTCG +
Preference number: 2 (lower is better)
Translates to: GVGGAVEMLGCWLLQCLCVIGHC*LMCNNS
Trigger: CGAATTATTACACATCAGGCAGCAATGGCCTATAAC...GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp CTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGATGCTGCAGCACACTGTAAGATGGGACTGCTGGTaGGCTTCTACTCTGTACTTG +
Preference number: 2 (lower is better)
Translates to: LLVRHKGWKLAKMLQHTVRWDCW*ASTLYL
Trigger: CAAGTACAGAGTAGAAGCCCACCAGCAGTCCCATCT...TACAGTGTGCTGCAGCATCTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR TCA 90 bp GTGTGGGTATGGAGCGCTGCCCTGACTGAGAAAGGCATGATGCTCGCTCCACTGTCTGTTCTGTGGATTTaGTTCCAAATCAACCTGTTT +
Preference number: 2 (lower is better)
Translates to: VWVWSAALTEKGMMLAPLSVLWI*FQINLF
Trigger: AAACAGGTTGATTTGGAATCAAATCCACAGAACAGA...CAGTGGAGCGAGCATCATGCCTTTCTCAGTCAGGGCAGCGCTCCATACCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR TCA 90 bp GGTCCTGAAGCTCTTTACACTGAGCCAGACTGTCTTGAGGAGTGCTTACTTCTTAGCTGGGGAAGGGGATaGAAGTGGCGATTAGGGATT +
Preference number: 2 (lower is better)
Translates to: GPEALYTEPDCLEECLLLSWGRG*KWRLGI
Trigger: AATCCCTAATCGCCACTTTCATCCCCTTCCCCAGCT...AAGAAGTAAGCACTCCTCAAGACAGTCTGGCTCAGTGTAAAGAGCTTCAGGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR GCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGAGTGGTGCTGTAACTTaGCGGCTCAGTTTTCCAGCT +
Preference number: 2 (lower is better)
Translates to: GLAASASPGNLLEMQIIRSGAVT*RLSFPA
Trigger: AGCTGGAAAACTGAGCCGGCAAGTTACAGCACCACT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR GCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTGACCAAAATCAGAAATaGTGGGGGTGGGTCCAGCTA +
Preference number: 2 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETDQNQK*WGWVQL
Trigger: TAGCTGGACCCACCCCCAGCATTTCTGATTTTGGTC...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR GCA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGTTTAACAAGGTGTGCTaGTGTGGAATTGGAAAGGGT +
Preference number: 2 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKFNKVC*CGIGKG
Trigger: ACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAA...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR TCA 90 bp GGACACCTCGAGGTTCTCCGACTTCAGTTGATCCTCAGGGGGTTTGACAGTCTTCCGGGGATGAAAAGTTaGAAGAAGATTGGTTACTGT +
Preference number: 2 (lower is better)
Translates to: GHLEVLRLQLILRGFDSLPGMKS*KKIGYC
Trigger: ACAGTAACCAATCTTCTTTCAACTTTTCATCCCCGG...AAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR GCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTGCTTTAGACGACCACTaGGGAACTGGGTTTGGTATT +
Preference number: 2 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETALDDH*GTGFGI
Trigger: AATACCAAACCCAGTTCCGCAGTGGTCGTCTAAAGC...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTCATACAGAGAAAGAGTaGTGCTGTAACTTGCCGGCT +
Preference number: 2 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETHTEKE*CCNLPA
Trigger: AGCCGGCAAGTTACAGCACCACTCTTTCTCTGTATG...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGCGACCACTGCGGAACTaGGTTTGGTATTTAACCACA +
Preference number: 2 (lower is better)
Translates to: GLAASASPGNLLEMQIIRRPLRN*VWYLTT
Trigger: TGTGGTTAAATACCAAACCCAGTTCCGCAGTGGTCG...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp GGTCCTGAAGCTCTTTACACTGAGCCAGACTGTCTTGAGGAGTGCTTACTTCTTCTGATGCTGATTTTGTaGCTGGCCTATGGTGACAGG +
Preference number: 2 (lower is better)
Translates to: GPEALYTEPDCLEECLLLLMLIL*LAYGDR
Trigger: CCTGTCACCATAGGCCAGCCACAAAATCAGCATCAG...AAGAAGTAAGCACTCCTCAAGACAGTCTGGCTCAGTGTAAAGAGCTTCAGGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR TCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGTGGTGTCTTTGTAAGTaGTTGGCACCACTACGTGAT +
Preference number: 2 (lower is better)
Translates to: GLAASASPGNLLEMQIIRWCLCK*LAPLRD
Trigger: ATCACGTAGTGGTGCCAATCACTTACAAAGACACCA...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR TCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTATACTGGCTGAAGTTTaGGAACCATTGCTCCATCCT +
Preference number: 2 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETILAEV*EPLLHP
Trigger: AGGATGGAGCAATGGTTCTCAAACTTCAGCCAGTAT...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR TCA 90 bp GGACACCTCGAGGTTCTCCGACTTCAGTTGATCCTCAGGGGGTTTGACAGTCTTTTATGTGTCTTGGGTTaGGATTATCTTTGCGAGGAA +
Preference number: 2 (lower is better)
Translates to: GHLEVLRLQLILRGFDSLLCVLG*DYLCEE
Trigger: TTCCTCGCAAAGATAATCTCAACCCAAGACACATAA...AAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR TCA 90 bp ATATCTGGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTGATGAGACAGTTCTCTaGTTAAGTCTTGAAACCTTG +
Preference number: 2 (lower is better)
Translates to: ISGVGGAVEMLGCWLLQCDETVL*LSLETL
Trigger: CAAGGTTTCAAGACTTAATCAGAGAACTGTCTCATC...ACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCCAGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR GCA 90 bp CTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGATGCTGCAGCACACTGTAGACTGTCTTGAGGAGTaGTTACTTCTTCAGAACAAG +
Preference number: 2 (lower is better)
Translates to: LLVRHKGWKLAKMLQHTVDCLEE*LLLQNK
Trigger: CTTGTTCTGAAGAAGTAAGCACTCCTCAAGACAGTC...TACAGTGTGCTGCAGCATCTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp ATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTGAGCAGGTGGTATCTGATTTaGTTGTTCAGGCAAATTATT +
Preference number: 2 (lower is better)
Translates to: ILRGFDSLGWRYQLSGLSRWYLI*LFRQII
Trigger: AATAATTTGCCTGAACAACCAAATCAGATACCACCT...GCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CAA 90 bp AAGGTAGAGCTGAATACAAGAGGCACGCAGCGCTTATCCTGGAGCTaGCTAACCATTAACCAAAGGCACTCTTTTATCCCAAACTGTCTG +
Preference number: 2 (lower is better)
Translates to: KVELNTRGTQRLSWS*LTINQRHSFIPNCL
Trigger: CAGACAGTTTGGGATAAAAGAGTGCCTTTGGTTAATGGTTAGCAAGCTCCAGGATAAGCGCTGCGTGCCTCTTGTATTCAGCTCTACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CAA 90 bp GGTGAGTTGAATATCTGGGGTGGGAGGCGCTGTGGAAATGCTGGGTaGCTGGCTACTTCAATGTCTCTGCTGTTATCATTAAAGTTAGAA +
Preference number: 2 (lower is better)
Translates to: GELNIWGGRRCGNAG*LATSMSLLLSLKLE
Trigger: TTCTAACTTTAATGATAACAGCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCCAGATATTCAACTCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR TCA 90 bp TGGGTGAAATGGCTCTTGACCAATAGCATGTTGATGATTCTGTATTTGTACAAATTCTGCGGTGGCCTGTaGGGCAATGGAGGTAGGCCA +
Preference number: 2 (lower is better)
Translates to: WVKWLLTNSMLMILYLYKFCGGL*GNGGRP
Trigger: TGGCCTACCTCCATTGCCTCACAGGCCACCGCAGAA...TTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGAGCCATTTCACCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTGATCATCAGGAAGATTaGGTTCATTCGAAAGGTTCC +
Preference number: 2 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETDHQED*VHSKGS
Trigger: GGAACCTTTCGAATGAACCCAATCTTCCTGATGATC...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGCATGGTTGGAAAGATaGCATTATGTAATGCTGAGG +
Preference number: 2 (lower is better)
Translates to: GLAASASPGNLLEMQIIRAWLER*HYVMLR
Trigger: CCTCAGCATTACATAATGCCATCTTTCCAACCATGC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGTAATCCCAACACTTTaGGAGCCCGAGGCGGGCAGA +
Preference number: 2 (lower is better)
Translates to: LLHIASTFMGFKESGQMTVIPTL*EPEAGR
Trigger: TCTGCCCGCCTCGGGCTCCCAAAGTGTTGGGATTAC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp GCAAATTATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGATTGCATACTGTGCGTaGGGAGCAGGAAGGGGAAGA +
Preference number: 2 (lower is better)
Translates to: ANYSAADLTRCAAVELERIAYCA*GAGRGR
Trigger: TCTTCCCCTTCCTGCTCCCCACGCACAGTATGCAAT...CCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATAATTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CAA 90 bp GCTGAGGCTGCTGATTCAACTGACTTTGCTGCTGGACTACCTGATTaGGCTGAGGTGGTATCTGATTTGGTTGTTCAGGCAAATTATTCT +
Preference number: 2 (lower is better)
Translates to: AEAADSTDFAAGLPD*AEVVSDLVVQANYS
Trigger: AGAATAATTTGCCTGAACAACCAAATCAGATACCACCTCAGCCAAATCAGGTAGTCCAGCAGCAAAGTCAGTTGAATCAGCAGCCTCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR TCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTGCATACACGACCCCATaGCCCTTAACTAAATATAAA +
Preference number: 2 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETAYTTP*PLTKYK
Trigger: TTTATATTTAGTTAAGGGTCATGGGGTCGTGTATGC...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR TCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGATGGAAACTTGCAATaGTTCTTACACAAGACGTGT +
Preference number: 2 (lower is better)
Translates to: GLAASASPGNLLEMQIIRDGNLQ*FLHKTC
Trigger: ACACGTCTTGTGTAAGAATCATTGCAAGTTTCCATC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR GCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAATATAAGGTGATGGGGTaGATACACGACCCCATGACC +
Preference number: 2 (lower is better)
Translates to: PKVGKFISFLSSSNASIKYKVMG*IHDPMT
Trigger: GGTCATGGGGTCGTGTATGCACCCCATCACCTTATA...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR GCA 90 bp TGGGTGAAATGGCTCTTGACCAATAGCATGTTGATGATTCTGTATTTGTACAAAAGCATGGGAGGGGGCTaGTGCTCCGGAATTACAGCT +
Preference number: 2 (lower is better)
Translates to: WVKWLLTNSMLMILYLYKSMGGG*CSGITA
Trigger: AGCTGTAATTCCGGAGCAGCAGCCCCCTCCCATGCT...TTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGAGCCATTTCACCCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTCAGAGACCCACAGCCTaGAACGCAAAGCCACACACA +
Preference number: 2 (lower is better)
Translates to: LLHIASTFMGFKESGQMTQRPTA*NAKPHT
Trigger: TGTGTGTGGCTTTGCGTTCCAGGCTGTGGGTCTCTG...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp GGACACCTCGAGGTTCTCCGACTTCAGTTGATCCTCAGGGGGTTTGACAGTCTTAAGATTTATGTGTCTTaGGTTGAGATTATCTTTGCG +
Preference number: 2 (lower is better)
Translates to: GHLEVLRLQLILRGFDSLKIYVS*VEIIFA
Trigger: CGCAAAGATAATCTCAACCCAAGACACATAAATCTT...AAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp GGTCCTGAAGCTCTTTACACTGAGCCAGACTGTCTTGAGGAGTGCTTACTTCTTCTGATTTGGCTGAGGTaGTATCTGATTTGGTTGTTC +
Preference number: 2 (lower is better)
Translates to: GPEALYTEPDCLEECLLLLIWLR*YLIWLF
Trigger: GAACAACCAAATCAGATACCACCTCAGCCAAATCAG...AAGAAGTAAGCACTCCTCAAGACAGTCTGGCTCAGTGTAAAGAGCTTCAGGACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp TGGGTGAAATGGCTCTTGACCAATAGCATGTTGATGATTCTGTATTTGTACAAAGTGGTCTGTACTGGATaGGGGAGATGGGACTGCTGG +
Preference number: 2 (lower is better)
Translates to: WVKWLLTNSMLMILYLYKVVCTG*GRWDCW
Trigger: CCAGCAGTCCCATCTCCCCCATCCAGTACAGACCAC...TTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGAGCCATTTCACCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR TCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTCTGTGCATCTATAGATaGAGTCCAACTACCTTAATT +
Preference number: 2 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETLCIYR*SPTTLI
Trigger: AATTAAGGTAGTTGGACTTCATCTATAGATGCACAG...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR TCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGATTGGCACCACTACGTaGTATTTTGAACAAGAAATC +
Preference number: 2 (lower is better)
Translates to: GLAASASPGNLLEMQIIRIGTTT*YFEQEI
Trigger: GATTTCTTGTTCAAAATATCACGTAGTGGTGCCAAT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR TCA 90 bp TTCTGTTGCAAGTTAGCAAAAGTCCATGCTCCATCAGGTGCCAGGTATTTCAAGTGCAAAAGTCTTGATTaGGGTGGTGGCATTTCAGCT +
Preference number: 2 (lower is better)
Translates to: FCCKLAKVHAPSGARYFKCKSLD*GGGISA
Trigger: AGCTGAAATGCCACCACCTCAATCAAGACTTTTGCA...CTTGAAATACCTGGCACCTGATGGAGCATGGACTTTTGCTAACTTGCAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR GCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTACTTCTACTCTGTGTTaGAACCTATGTAATTTGCCA +
Preference number: 2 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETTSTLC*NLCNLP
Trigger: TGGCAAATTACATAGGTTGCAACACAGAGTAGAAGT...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAACGCAGCGCTTATCCTaGAGCTTGCTAACCATTAAC +
Preference number: 2 (lower is better)
Translates to: PKVGKFISFLSSSNASIKTQRLS*SLLTIN
Trigger: GTTAATGGTTAGCAAGCTCCAGGATAAGCGCTGCGT...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGTTACTCTTTCAAGATaGAGATGGTGTCTTTGTAAG +
Preference number: 2 (lower is better)
Translates to: GLAASASPGNLLEMQIIRVTLSR*RWCLCK
Trigger: CTTACAAAGACACCATCTCCATCTTGAAAGAGTAAC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp TTCTGTTGCAAGTTAGCAAAAGTCCATGCTCCATCAGGTGCCAGGTATTTCAAGGAAACCTTGAGTATGTaGTCTCCACTTCATCTTCGG +
Preference number: 2 (lower is better)
Translates to: FCCKLAKVHAPSGARYFKETLSM*SPLHLR
Trigger: CCGAAGATGAAGTGGAGACCACATACTCAAGGTTTC...CTTGAAATACCTGGCACCTGATGGAGCATGGACTTTTGCTAACTTGCAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR GCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTACAGAGAAAGAGTGGTaGTGTAACTTGCCGGCTCAG +
Preference number: 2 (lower is better)
Translates to: LLHIASTFMGFKESGQMTTEKEW*CNLPAQ
Trigger: CTGAGCCGGCAAGTTACAGCACCACTCTTTCTCTGT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGAAGCACATAGCTACGTaGCAAAACTTTTTCTTCTTT +
Preference number: 2 (lower is better)
Translates to: GLAASASPGNLLEMQIIRKHIAT*QNFFFF
Trigger: AAAGAAGAAAAAGTTTTGCCACGTAGCTATGTGCTT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTAGGTTCTTTAAAGCATaGTTGGAAAGATGGCATTAT +
Preference number: 2 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETRFFKA*LERWHY
Trigger: ATAATGCCATCTTTCCAACCATGCTTTAAAGAACCT...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp TATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCTCTTTGAACAGGGCTTaGAGATTTTCCCAAATTTGG +
Preference number: 2 (lower is better)
Translates to: YSAADLTRCAAVELERVVSLNRA*RFSQIW
Trigger: CCAAATTTGGGAAAATCTCCAAGCCCTGTTCAAAGA...GACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp GGTCCTGAAGCTCTTTACACTGAGCCAGACTGTCTTGAGGAGTGCTTACTTCTTTTAAAGTTAGAAAAGTaGCTACTGTGGTCTGTACTG +
Preference number: 2 (lower is better)
Translates to: GPEALYTEPDCLEECLLLLKLEK*LLWSVL
Trigger: CAGTACAGACCACAGTAGCCACTTTTCTAACTTTAA...AAGAAGTAAGCACTCCTCAAGACAGTCTGGCTCAGTGTAAAGAGCTTCAGGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGCCGACCAGGTCCTCTaGGCTCATACTCTTCTAAGC +
Preference number: 2 (lower is better)
Translates to: FYSCTINLLAASLMQTYVADQVL*AHTLLS
Trigger: GCTTAGAAGAGTATGAGCCCAGAGGACCTGGTCGGC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR TCA 90 bp TATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCCTGTGCATCTATAGATaGAGTCCAACTACCTTAATT +
Preference number: 2 (lower is better)
Translates to: YSAADLTRCAAVELERVVLCIYR*SPTTLI
Trigger: AATTAAGGTAGTTGGACTTCATCTATAGATGCACAG...GACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAAATTCTTTATACCACTaGAGAAGAGGGAAGCCAGGT +
Preference number: 2 (lower is better)
Translates to: PKVGKFISFLSSSNASIKNSLYH*RRGKPG
Trigger: ACCTGGCTTCCCTCTTCTCCAGTGGTATAAAGAATT...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CAA 90 bp GATTATAGGATTGCCTATCGAAAGTGGTCTTCCAAAAACCTGTTTTaGAATGGATCATCAGGAAGATTGGGTTCATTCGAAAGGTTCCCC +
Preference number: 2 (lower is better)
Translates to: DYRIAYRKWSSKNLF*NGSSGRLGSFERFP
Trigger: GGGGAACCTTTCGAATGAACCCAATCTTCCTGATGATCCATTCAAAAACAGGTTTTTGGAAGACCACTTTCGATAGGCAATCCTATAATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATTGTTCTTCACACCCTaGCTCTTAACAAAGGTGGCT +
Preference number: 2 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPLFFTP*LLTKVA
Trigger: AGCCACCTTTGTTAAGAGTCAGGGTGTGAAGAACAA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGTGGGTCCAGCTATCTaGATTTTAACAAGACCTCGA +
Preference number: 2 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPVGPAI*ILTRPR
Trigger: TCGAGGTCTTGTTAAAATTCAGATAGCTGGACCCAC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR TCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGAGAATCAGACCCAGTaGTTTTCAAAGTGTGGTTCC +
Preference number: 2 (lower is better)
Translates to: LLHIASTFMGFKESGQMTENQTQ*FSKCGS
Trigger: GGAACCACACTTTGAAAATCACTGGGTCTGATTCTC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR TCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTCATGGTCTGGATTTATaGAAATCCAGGACCCTTCCT +
Preference number: 2 (lower is better)
Translates to: LLHIASTFMGFKESGQMTHGLDL*KSRTLP
Trigger: AGGAAGGGTCCTGGATTTTCATAAATCCAGACCATG...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATTACAAGTCTATGTCTaGCACCTTACACAGAGACCC +
Preference number: 2 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPLQVYV*HLTQRP
Trigger: GGGTCTCTGTGTAAGGTGGCAGACATAGACTTGTAA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTCTGCGGAACTGGGTTTaGTATTTAACCACAGTTCAC +
Preference number: 2 (lower is better)
Translates to: LLHIASTFMGFKESGQMTLRNWV*YLTTVH
Trigger: GTGAACTGTGGTTAAATACCAAACCCAGTTCCGCAG...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTAGCATCAGCATCGCCTaGAAACTTGTTGGAAATGCA +
Preference number: 2 (lower is better)
Translates to: LLHIASTFMGFKESGQMTSISIA*KLVGNA
Trigger: TGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAAGCATATGCCCAAATaGCAACCAAAACCCCCTTTA +
Preference number: 2 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPKHMPK*QPKPPL
Trigger: TAAAGGGGGTTTTGGTTGTCATTTGGGCATATGCTT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGCAACCTATGTAATTTaGCACCCTTTCCCCTTTACT +
Preference number: 2 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPATYVI*HPFPFT
Trigger: AGTAAAGGGGAAAGGGTGGCAAATTACATAGGTTGC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAACATTTGTACATCAACTaGCCATTTCTGGTACAGAAA +
Preference number: 2 (lower is better)
Translates to: PKVGKFISFLSSSNASIKHLYIN*PFLVQK
Trigger: TTTCTGTACCAGAAATGGCCAGTTGATGTACAAATG...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAAAAGCCACACACAAATaGACCGCACTCTTAGCAGAA +
Preference number: 2 (lower is better)
Translates to: FYSCTINLLAASLMQTYVKATHK*TALLAE
Trigger: TTCTGCTAAGAGTGCGGTTCATTTGTGTGTGGCTTT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR TCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTAGACACGCCTCATTTTaGTGGAAACTTGCAATGATT +
Preference number: 2 (lower is better)
Translates to: LLHIASTFMGFKESGQMTRHASF*WKLAMI
Trigger: AATCATTGCAAGTTTCCATCAAAATGAGGCGTGTCT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR TCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTAATTCTGATACTGGCTaGAGTTTGAGAACCATTGCT +
Preference number: 2 (lower is better)
Translates to: LLHIASTFMGFKESGQMTNSDTG*SLRTIA
Trigger: AGCAATGGTTCTCAAACTTCAGCCAGTATCAGAATT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR GCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTAACATCTTTTACGTCTaGAGCTTTGCTCTTGACATG +
Preference number: 2 (lower is better)
Translates to: LLHIASTFMGFKESGQMTNIFYV*SFALDM
Trigger: CATGTCAAGAGCAAAGCTGCAGACGTAAAAGATGTT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR GCA 90 bp TGGGTGAAATGGCTCTTGACCAATAGCATGTTGATGATTCTGTATTTGTACAAAGGGTGGAGGAGTATATaGTCTAATAGGATTGCCAAT +
Preference number: 2 (lower is better)
Translates to: WVKWLLTNSMLMILYLYKGWRSI*SNRIAN
Trigger: ATTGGCAATCCTATTAGAGCATATACTCCTCCACCC...TTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGAGCCATTTCACCCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATCAACTGGCCATTTCTaGTACAGAAACCCAGCATGT +
Preference number: 2 (lower is better)
Translates to: FYSCTINLLAASLMQTYVSTGHF*YRNPAC
Trigger: ACATGCTGGGTTTCTGTACCAGAAATGGCCAGTTGA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAATTTAACTCTATCCTATaGTGGATGGAGATTACAACA +
Preference number: 2 (lower is better)
Translates to: PKVGKFISFLSSSNASIKFNSIL*WMEITT
Trigger: TGTTGTAATCTCCATCCACCATAGGATAGAGTTAAA...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATCTGCTCTGAAGAAATaGAAGCTGGTAATACTTGGT +
Preference number: 2 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPSALKK*KLVILG
Trigger: ACCAAGTATTACCAGCTTCCATTTCTTCAGAGCAGA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAATCTGCTATAACAATTTaGCAAAGCATATGCCCAAAT +
Preference number: 2 (lower is better)
Translates to: PKVGKFISFLSSSNASIKSAITI*QSICPN
Trigger: ATTTGGGCATATGCTTTGCCAAATTGTTATAGCAGA...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CAA 90 bp GTAATGCTGAGGAAGAGTAAGCTTGTTGTAAGTCAAAATAAGCATTaGATGCAGAATCTAAGAAGAGTATCAGATGGAAGCAGCGTTAGA +
Preference number: 2 (lower is better)
Translates to: VMLRKSKLVVSQNKH*MQNLRRVSDGSSVR
Trigger: TCTAACGCTGCTTCCATCTGATACTCTTCTTAGATTCTGCATCAAATGCTTATTTTGACTTACAACAAGCTTACTCTTCCTCAGCATTAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTACATATTTATATAAGGTaGTGGGGTGCATACACGACC +
Preference number: 2 (lower is better)
Translates to: FYSCTINLLAASLMQTYVHIYIR*WGAYTT
Trigger: GGTCGTGTATGCACCCCATCACCTTATATAAATATG...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTAACTCTATCCTATGGTaGATGGAGATTACAACAACA +
Preference number: 2 (lower is better)
Translates to: LLHIASTFMGFKESGQMTNSILW*MEITTT
Trigger: TGTTGTTGTAATCTCCATCCACCATAGGATAGAGTT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAAACCTGTTTTTGAATaGATCATCAGGAAGATTGGG +
Preference number: 2 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPKPVFE*IIRKIG
Trigger: CCCAATCTTCCTGATGATCCATTCAAAAACAGGTTT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGTCTTTGTAAGTGATTaGCACCACTACGTGATATTT +
Preference number: 2 (lower is better)
Translates to: LLHIASTFMGFKESGQMTVFVSD*HHYVIF
Trigger: AAATATCACGTAGTGGTGCCAATCACTTACAAAGAC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTTTTAAGGATTATCTGTaGTTTTCGATGCTCCATGTC +
Preference number: 2 (lower is better)
Translates to: LLHIASTFMGFKESGQMTFKDYL*FSMLHV
Trigger: GACATGGAGCATCGAAAACCACAGATAATCCTTAAA...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTTATAGGAAGCAGGCATaGTCTGGATTTATGAAAATC +
Preference number: 2 (lower is better)
Translates to: LLHIASTFMGFKESGQMTYRKQA*SGFMKI
Trigger: GATTTTCATAAATCCAGACCATGCCTGCTTCCTATA...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTACTAAATGTGGTGATCTaGCATCATACAGAGAAAGAG +
Preference number: 2 (lower is better)
Translates to: FYSCTINLLAASLMQTYVLNVVI*HHTEKE
Trigger: CTCTTTCTCTGTATGATGTCAGATCACCACATTTAG...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTACTATCCTATGGTGGATaGAGATTACAACAACACATC +
Preference number: 2 (lower is better)
Translates to: FYSCTINLLAASLMQTYVLSYGG*RLQQHI
Trigger: GATGTGTTGTTGTAATCTCCATCCACCATAGGATAG...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTACCAAAAACCTGTTTTTaGATGGATCATCAGGAAGAT +
Preference number: 2 (lower is better)
Translates to: FYSCTINLLAASLMQTYVPKTCF*MDHQED
Trigger: ATCTTCCTGATGATCCATTCAAAAACAGGTTTTTGG...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATCAGTTTTCCAGCTGTaGTTTATGCTAACCATTAAC +
Preference number: 2 (lower is better)
Translates to: FYSCTINLLAASLMQTYVSVFQL*FMLTIN
Trigger: GTTAATGGTTAGCATAAATCACAGCTGGAAAACTGA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAATTGCCTATCGAAAGTaGTCTTCCAAAAACCTGTTT +
Preference number: 2 (lower is better)
Translates to: FYSCTINLLAASLMQTYVIAYRK*SSKNLF
Trigger: AAACAGGTTTTTGGAAGACCACTTTCGATAGGCAAT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR GCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAAACATTTATCTAGCTTaGGTTGTAGTCCTGTATATG +
Preference number: 2 (lower is better)
Translates to: FYSCTINLLAASLMQTYVNIYLA*VVVLYM
Trigger: CATATACAGGACTACAACGCAAGCTAGATAAATGTT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR GCA 72 bp GGGCCCGCAGAGCGCTGGCATAGGACATGGCGGGCTTaGCCCCCGCAGAGCTCTGGGGGCTACTGCTATTGG +
Preference number: 3 (lower is better)
Translates to: GPAERWHRTWRA*PPQSSGGYCYW
Trigger: CCAATAGCAGTAGCCCCCAGAGCTCTGCGGGGGGCAAGCCCGCCATGTCCTATGCCAGCGCTCTGCGGGCCC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CCA 72 bp ACTCTTCTTGGCCTGCTCAGGAGGGGGCCTGGGCTTTaGAGGGGCCCGCAGAGCGCTGGCATAGGACATGGC +
Preference number: 3 (lower is better)
Translates to: TLLGLLRRGPGL*RGPQSAGIGHG
Trigger: GCCATGTCCTATGCCAGCGCTCTGCGGGCCCCTCCAAAGCCCAGGCCCCCTCCTGAGCAGGCCAAGAAGAGT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CCA 72 bp GTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTaGCCTGCTCAGGAGGGGGCCTGGGCTTTGGAGGGG +
Preference number: 3 (lower is better)
Translates to: VPGRETEGRYSS*PAQEGAWALEG
Trigger: CCCCTCCAAAGCCCAGGCCCCCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp AGGAGGGGGCCTGGGCTTTGGAGGGGCCCGCAGAGCGCTGGCATAGGACATGGCTGCACAATTAACCTCTaGGCTGCTAGCTTGATGCAA +
Preference number: 3 (lower is better)
Translates to: RRGPGLWRGPQSAGIGHGCTINL*AASLMQ
Trigger: TTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCA...GCCATGTCCTATGCCAGCGCTCTGCGGGCCCCTCCAAAGCCCAGGCCCCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp GGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCTCTGCAAGAATGGGGCCGGGTaGTGCAATGGCTCTCAGAGG +
Preference number: 3 (lower is better)
Translates to: GVGGAVEMLGCWLLQCLCKNGAG*CNGSQR
Trigger: CCTCTGAGAGCCATTGCACAACCCGGCCCCATTCTT...GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp GGGCTGCTGCTCCGGAATTACAGCTTCTGCAGGAGGAGACTGTGGCCGATGAGCCTCCTGATGCTGATTTaGTGGCTGGCCTATGGTGAC +
Preference number: 3 (lower is better)
Translates to: GLLLRNYSFCRRRLWPMSLLMLI*WLAYGD
Trigger: GTCACCATAGGCCAGCCACAAAATCAGCATCAGGAG...GCTCATCGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCGGAGCAGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR GCA 72 bp GGTTGTGCAATGGCTCTCAGAGGACTGTGGCCTTCTTaGAGCATGGGAGGGGGCTGCTGCTCCGGAATTACA +
Preference number: 3 (lower is better)
Translates to: GCAMALRGLWPS*SMGGGCCSGIT
Trigger: TGTAATTCCGGAGCAGCAGCCCCCTCCCATGCTGCAAGAAGGCCACAGTCCTCTGAGAGCCATTGCACAACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR GCA 72 bp CTCTGGGGGCTACTGCTATTGGCCGACTCCGCGATCTaGTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGA +
Preference number: 3 (lower is better)
Translates to: LWGLLLLADSAI*LLGIRGGNWPR
Trigger: TCTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCCCCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CCA 72 bp CCATTGCTGCCAGATGAGCTCCCTAGGCTCAGTTCCTaGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCC +
Preference number: 3 (lower is better)
Translates to: PLLPDELPRLSS*KRDRGSLLFLA
Trigger: GGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTGAGCCTAGGGAGCTCATCTGGCAGCAATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp GTGTGGGTATGGAGCGCTGCCCTGACTGAGAAAGGCATGATGCTCGCTCCACTGGAGATTTTCCCAAATTaGGGTGAGGTCCAAGAGGGG +
Preference number: 3 (lower is better)
Translates to: VWVWSAALTEKGMMLAPLEIFPN*GEVQEG
Trigger: CCCCTCTTGGACCTCACCCAAATTTGGGAAAATCTC...CAGTGGAGCGAGCATCATGCCTTTCTCAGTCAGGGCAGCGCTCCATACCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR TCA 72 bp AGTATGTGGTCTCCACTTCATCTTCGGCACTGCTGGTaGGCTTCCAGTCTGCCCTCACTGGCGGCTGATGTA +
Preference number: 3 (lower is better)
Translates to: SMWSPLHLRHCW*ASSLPSLAADV
Trigger: TACATCAGCCGCCAGTGAGGGCAGACTGGAAGCTCACCAGCAGTGCCGAAGATGAAGTGGAGACCACATACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR TCA 72 bp CGAGGTTCTCCGACTTCAGTTGATCCTCAGGGGGTTTaGCAGTCTTGGGTGGCGCTATCAACTCTCTGGGCT +
Preference number: 3 (lower is better)
Translates to: RGSPTSVDPQGV*QSWVALSTLWA
Trigger: AGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR TCA 72 bp AAGGAACTGGACACCTCGAGGTTCTCCGACTTCAGTTaGTCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCT +
Preference number: 3 (lower is better)
Translates to: KELDTSRFSDFS*SSGGLTVLGGA
Trigger: AGCGCCACCCAAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCCAGTTCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp GGACACCTCGAGGTTCTCCGACTTCAGTTGATCCTCAGGGGGTTTGACAGTCTTTTGGAAAGGGTGGTCTaGGTAGCTGGGGAAGGGGAT +
Preference number: 3 (lower is better)
Translates to: GHLEVLRLQLILRGFDSLLERVV*VAGEGD
Trigger: ATCCCCTTCCCCAGCTACCAAGACCACCCTTTCCAA...AAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp GGTCCTGAAGCTCTTTACACTGAGCCAGACTGTCTTGAGGAGTGCTTACTTCTTAGGACTGTGGCCTTCTaGCAGCATGGGAGGGGGCTG +
Preference number: 3 (lower is better)
Translates to: GPEALYTEPDCLEECLLLRTVAF*QHGRGL
Trigger: CAGCCCCCTCCCATGCTGCAAGAAGGCCACAGTCCT...AAGAAGTAAGCACTCCTCAAGACAGTCTGGCTCAGTGTAAAGAGCTTCAGGACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp ATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTGAGCAACGAGAAAGGTGAGTaGAATATCTGGGGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: ILRGFDSLGWRYQLSGLSNEKGE*NIWGGR
Trigger: CCTCCCACCCCAGATATTCAACTCACCTTTCTCGTT...GCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR TCA 72 bp AGGAGGGGCAAGGTGTTCAGATGGCAACGAGAAAGGTaGGTTGAATATCTGGGGTGGGAGGCGCTGTGGAAA +
Preference number: 3 (lower is better)
Translates to: RRGKVFRWQRER*VEYLGWEALWK
Trigger: TTTCCACAGCGCCTCCCACCCCAGATATTCAACTCACCTTTCTCGTTGCCATCTGAACACCTTGCCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR TCA 72 bp TTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTaGGCTGTCCTGCTGGATCCATTGCACGGAATGTTC +
Preference number: 3 (lower is better)
Translates to: LTVLGGAINSLG*AVLLDPLHGMF
Trigger: GAACATTCCGTGCAATGGATCCAGCAGGACAGCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR GCA 72 bp TGGGTGGCGCTATCAACTCTCTGGGCTGAGCTGTCCTaGTGGATCCATTGCACGGAATGTTCTGATAAGGAG +
Preference number: 3 (lower is better)
Translates to: WVALSTLWAELS*WIHCTECSDKE
Trigger: CTCCTTATCAGAACATTCCGTGCAATGGATCCAGCAGGACAGCTCAGCCCAGAGAGTTGATAGCGCCACCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGGCTGGACTACCTGATTaGGCTGAGGTGGTATCTGAT +
Preference number: 3 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKAGLPD*AEVVSD
Trigger: ATCAGATACCACCTCAGCCAAATCAGGTAGTCCAGC...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR TCA 72 bp ATTGGAAAGGGTGGTCTTGGTAGCTGGGGAAGGGGATaGAAGTGGCGATTAGGGATTGCATACTGTGCGTGG +
Preference number: 3 (lower is better)
Translates to: IGKGGLGSWGRG*KWRLGIAYCAW
Trigger: CCACGCACAGTATGCAATCCCTAATCGCCACTTTCATCCCCTTCCCCAGCTACCAAGACCACCCTTTCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp GGGCTGCTGCTCCGGAATTACAGCTTCTGCAGGAGGAGACTGTGGCCGATGAGCCAGGTCCGGAATTATTaGTATCACTTTTACCATTTC +
Preference number: 3 (lower is better)
Translates to: GLLLRNYSFCRRRLWPMSQVRNY*YHFYHF
Trigger: GAAATGGTAAAAGTGATACAAATAATTCCGGACCTG...GCTCATCGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCGGAGCAGCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGGGGTTGAGATTATCTTaGCGAGGAAATTTGGTACTG +
Preference number: 3 (lower is better)
Translates to: QFLEERQRVATLLGLLRRGLRLS*RGNLVL
Trigger: CAGTACCAAATTTCCTCGCAAAGATAATCTCAACCC...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGCTGATTCAACTGACTTaGCTGCTGGACTACCTGATT +
Preference number: 3 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKLIQLT*LLDYLI
Trigger: AATCAGGTAGTCCAGCAGCAAAGTCAGTTGAATCAG...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR TCA 72 bp TCCCGAGGGGTTCTCATCAATGAAGCTATTCAGATGTaGAGGAAGAATGGGGCCGGGTTGTGCAATGGCTCT +
Preference number: 3 (lower is better)
Translates to: SRGVLINEAIQM*RKNGAGLCNGS
Trigger: AGAGCCATTGCACAACCCGGCCCCATTCTTCCTTCACATCTGAATAGCTTCATTGATGAGAACCCCTCGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR GCA 72 bp CTGTTGCAAGTTAGCAAAAGTCCATGCTCCATCAGGTaGCAGGTATTTCAAGGGAGGAGGGGCAAGGTGTTC +
Preference number: 3 (lower is better)
Translates to: LLQVSKSPCSIR*QVFQGRRGKVF
Trigger: GAACACCTTGCCCCTCCTCCCTTGAAATACCTGGCACCTGATGGAGCATGGACTTTTGCTAACTTGCAACAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CCA 72 bp CTGATGCTGATTTTGTGGCTGGCCTATGGTGACAGGTaGGTGATGTCCAAGGCCATAAGGAATAGGAGATCC +
Preference number: 3 (lower is better)
Translates to: LMLILWLAYGDR*VMSKAIRNRRS
Trigger: GGATCTCCTATTCCTTATGGCCTTGGACATCACCCACCTGTCACCATAGGCCAGCCACAAAATCAGCATCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CCA 72 bp AAAGTTAGAAAAGTGGCTACTGTGGTCTGTACTGGATaGGGGAGATGGGACTGCTGGTGGGCTTCTACTCTG +
Preference number: 3 (lower is better)
Translates to: KVRKVATVVCTG*GRWDCWWASTL
Trigger: CAGAGTAGAAGCCCACCAGCAGTCCCATCTCCCCCATCCAGTACAGACCACAGTAGCCACTTTTCTAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CCA 72 bp GTTGAATATCTGGGGTGGGAGGCGCTGTGGAAATGCTaGGTTGCTGGCTACTTCAATGTCTCTGCTGTTATC +
Preference number: 3 (lower is better)
Translates to: VEYLGWEALWKC*VAGYFNVSAVI
Trigger: GATAACAGCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCCAGATATTCAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGTTAAGTCTTGAAACCTaGAGTATGTGGTCTCCACTT +
Preference number: 3 (lower is better)
Translates to: QFLEERQRVATLLGLLRRLSLET*SMWSPL
Trigger: AAGTGGAGACCACATACTCAAGGTTTCAAGACTTAA...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR GCA 72 bp TGTGGATCAAGATTGACCCTAAGCACACCAAACAAATaGACAGCTTCCAGACTGATGTCCAGGCAGCAGCGT +
Preference number: 3 (lower is better)
Translates to: CGSRLTLSTPNK*TASRLMSRQQR
Trigger: ACGCTGCTGCCTGGACATCAGTCTGGAAGCTGTGCATTTGTTTGGTGTGCTTAGGGTCAATCTTGATCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 72 bp AAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTaGAAACTTGTTGGAAATGCAAATCATCAGGCTCCA +
Preference number: 3 (lower is better)
Translates to: KCGSWTGSISIA*KLVGNANHQAP
Trigger: TGGAGCCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CAA 90 bp GGACACCTCGAGGTTCTCCGACTTCAGTTGATCCTCAGGGGGTTTGACAGTCTTCTCTTGGCTGCTAGCTaGATGCAAACATATGTAACA +
Preference number: 3 (lower is better)
Translates to: GHLEVLRLQLILRGFDSLLLAAS*MQTYVT
Trigger: TGTTACATATGTTTGCATCAAGCTAGCAGCCAAGAG...AAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp AAGGGGATGAAAGTGGCGATTAGGGATTGCATACTGTGCGTGGGGAGCAGGAAGGTGAGGATCTATTCTTaGAACAGGGCTTGGAGATTT +
Preference number: 3 (lower is better)
Translates to: KGMKVAIRDCILCVGSRKVRIYS*NRAWRF
Trigger: AAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCAC...CTTCCTGCTCCCCACGCACAGTATGCAATCCCTAATCGCCACTTTCATCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR TCA 72 bp GCCTCGATACATGCTAGGTGCACTCTCATGGCATTCTaGTGGCTTCTTTCCAGGATTCTCACTTCCATGCAT +
Preference number: 3 (lower is better)
Translates to: ASIHARCTLMAF*WLLSRILTSMH
Trigger: ATGCATGGAAGTGAGAATCCTGGAAAGAAGCCATCAGAATGCCATGAGAGTGCACCTAGCATGTATCGAGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 72 bp CTGGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTaGAAATGCAAATCATCAGGCTCCAGACCAAAATCA +
Preference number: 3 (lower is better)
Translates to: LDWQHQHRLETC*KCKSSGSRPKS
Trigger: TGATTTTGGTCTGGAGCCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CAA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAGAGTGGTGCTGTAACTaGCCGGCTCAGTTTTCCAGC +
Preference number: 3 (lower is better)
Translates to: PKVGKFISFLSSSNASIKEWCCN*PAQFSS
Trigger: GCTGGAAAACTGAGCCGGCAAGTTACAGCACCACTC...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CAA 90 bp ATATCTGGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTTTTATGTGTCTTGGGTaGAGATTATCTTTGCGAGGA +
Preference number: 3 (lower is better)
Translates to: ISGVGGAVEMLGCWLLQCFMCLG*RLSLRG
Trigger: TCCTCGCAAAGATAATCTCAACCCAAGACACATAAA...ACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCCAGATAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR TCA 72 bp TCTCTGAGACTTTCAAACTGCGAGAATCAGACCCAGTaGTTTTCAAAGTGTGGTTCCTGGACTGGCAGCATC +
Preference number: 3 (lower is better)
Translates to: SLRLSNCENQTQ*FSKCGSWTGSI
Trigger: GATGCTGCCAGTCCAGGAACCACACTTTGAAAATCACTGGGTCTGATTCTCGCAGTTTGAAAGTCTCAGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 72 bp GTAGAGCTGAATACAAGAGGCACGCAGCGCTTATCCTaGAGCTTGCTAACCATTAACCAAAGGCACTCTTTT +
Preference number: 3 (lower is better)
Translates to: VELNTRGTQRLS*SLLTINQRHSF
Trigger: AAAAGAGTGCCTTTGGTTAATGGTTAGCAAGCTCCAGGATAAGCGCTGCGTGCCTCTTGTATTCAGCTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 72 bp TGTCCCAGTGTGAGGATCTATTCTTTGAACAGGGCTTaGAGATTTTCCCAAATTTGGGTGAGGTCCAAGAGG +
Preference number: 3 (lower is better)
Translates to: CPSVRIYSLNRA*RFSQIWVRSKR
Trigger: CCTCTTGGACCTCACCCAAATTTGGGAAAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCACACTGGGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CCA 72 bp TGTGTAATAATTCGAGGATCAACTGCAAACCTACCCTaGTATCCTGTCCATGGTACAGGTAAAGGCACCGAC +
Preference number: 3 (lower is better)
Translates to: CVIIRGSTANLP*YPVHGTGKGTD
Trigger: GTCGGTGCCTTTACCTGTACCATGGACAGGATACCAGGGTAGGTTTGCAGTTGATCCTCGAATTATTACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CCA 72 bp CTGCTGTTATCATTAAAGTTAGAAAAGTGGCTACTGTaGTCTGTACTGGATGGGGGAGATGGGACTGCTGGT +
Preference number: 3 (lower is better)
Translates to: LLLSLKLEKWLL*SVLDGGDGTAG
Trigger: ACCAGCAGTCCCATCTCCCCCATCCAGTACAGACCACAGTAGCCACTTTTCTAACTTTAATGATAACAGCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTACTGAAAGCCCTGACTaGACAATTCTGTCTTCATAT +
Preference number: 3 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETTESPD*TILSSY
Trigger: ATATGAAGACAGAATTGTCAAGTCAGGGCTTTCAGT...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR TCA 72 bp GCGTTAGAATCCTTGACTGGCTATGGAAATAAGGAATaGGAAGTACTCATATACTCACAGCAGAGCGGTGGG +
Preference number: 3 (lower is better)
Translates to: ALESLTGYGNKE*EVLIYSQQSGG
Trigger: CCCACCGCTCTGCTGTGAGTATATGAGTACTTCTCATTCCTTATTTCCATAGCCAGTCAAGGATTCTAACGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR TCA 72 bp GGGGAGCAGGAAGGGGAAGATTTATGTGTCTTGGGTTaGGATTATCTTTGCGAGGAAATTTGGTACTGGGAT +
Preference number: 3 (lower is better)
Translates to: GEQEGEDLCVLG*DYLCEEIWYWD
Trigger: ATCCCAGTACCAAATTTCCTCGCAAAGATAATCTCAACCCAAGACACATAAATCTTCCCCTTCCTGCTCCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CCA 72 bp TGCGTGGGGAGCAGGAAGGGGAAGATTTATGTGTCTTaGGTTGAGATTATCTTTGCGAGGAAATTTGGTACT +
Preference number: 3 (lower is better)
Translates to: CVGSRKGKIYVS*VEIIFARKFGT
Trigger: AGTACCAAATTTCCTCGCAAAGATAATCTCAACCCAAGACACATAAATCTTCCCCTTCCTGCTCCCCACGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGTCCAAAAACCTGTTTTaGAATGGATCATCAGGAAGA +
Preference number: 3 (lower is better)
Translates to: GLAASASPGNLLEMQIIRSKNLF*NGSSGR
Trigger: TCTTCCTGATGATCCATTCAAAAACAGGTTTTTGGA...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CAA 90 bp GGTCCTGAAGCTCTTTACACTGAGCCAGACTGTCTTGAGGAGTGCTTACTTCTTTTCTTTGAACAGGGCTaGGAGATTTTCCCAAATTTG +
Preference number: 3 (lower is better)
Translates to: GPEALYTEPDCLEECLLLFFEQG*EIFPNL
Trigger: CAAATTTGGGAAAATCTCCAAGCCCTGTTCAAAGAA...AAGAAGTAAGCACTCCTCAAGACAGTCTGGCTCAGTGTAAAGAGCTTCAGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp GGTCCTGAAGCTCTTTACACTGAGCCAGACTGTCTTGAGGAGTGCTTACTTCTTGAGGTGGTATCTGATTaGGTTGTTCAGGCAAATTAT +
Preference number: 3 (lower is better)
Translates to: GPEALYTEPDCLEECLLLEVVSD*VVQANY
Trigger: ATAATTTGCCTGAACAACCAAATCAGATACCACCTC...AAGAAGTAAGCACTCCTCAAGACAGTCTGGCTCAGTGTAAAGAGCTTCAGGACC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR TCA 72 bp CAAGACCTCGAGGCAATTCTGATACTGGCTGAAGTTTaGGAACCATTGCTCCATCCTGTTCACAATTCTCAA +
Preference number: 3 (lower is better)
Translates to: QDLEAILILAEV*EPLLHPVHNSQ
Trigger: TTGAGAATTGTGAACAGGATGGAGCAATGGTTCTCAAACTTCAGCCAGTATCAGAATTGCCTCGAGGTCTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR TCA 72 bp ACATGGTTGAAAAGACGTTCAGACTCTGAAGGTCTCTaGGACTTTCAAACTGCGAGAATCAGACCCAGTGAT +
Preference number: 3 (lower is better)
Translates to: TWLKRRSDSEGL*DFQTARIRPSD
Trigger: ATCACTGGGTCTGATTCTCGCAGTTTGAAAGTCTCAGAGACCTTCAGAGTCTGAACGTCTTTTCAACCATGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR GCA 72 bp TCTGACATCATACAGAGAAAGAGTGGTGCTGTAACTTaGCGGCTCAGTTTTCCAGCTGTGATTTATGCTAAC +
Preference number: 3 (lower is better)
Translates to: SDIIQRKSGAVT*RLSFPAVIYAN
Trigger: GTTAGCATAAATCACAGCTGGAAAACTGAGCCGGCAAGTTACAGCACCACTCTTTCTCTGTATGATGTCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR GCA 72 bp CATTCTGATGGCTTCTTTCCAGGATTCTCACTTCCATaGATGTGGATCAAGATTGACCCTAAGCACACCAAA +
Preference number: 3 (lower is better)
Translates to: HSDGFFPGFSLP*MWIKIDPKHTK
Trigger: TTTGGTGTGCTTAGGGTCAATCTTGATCCACATGCATGGAAGTGAGAATCCTGGAAAGAAGCCATCAGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 72 bp TCAATGTCTCTGCTGTTATCATTAAAGTTAGAAAAGTaGCTACTGTGGTCTGTACTGGATGGGGGAGATGGG +
Preference number: 3 (lower is better)
Translates to: SMSLLLSLKLEK*LLWSVLDGGDG
Trigger: CCCATCTCCCCCATCCAGTACAGACCACAGTAGCCACTTTTCTAACTTTAATGATAACAGCAGAGACATTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGTTCTCCGACTTCAGTaGATCCTCAGGGGGTTTGAC +
Preference number: 3 (lower is better)
Translates to: FYSCTINLLAASLMQTYVVLRLQ*ILRGFD
Trigger: GTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAAC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR TCA 72 bp ATTTTAACAAGACCTCGAGGCAATTCTGATACTGGCTaGAGTTTGAGAACCATTGCTCCATCCTGTTCACAA +
Preference number: 3 (lower is better)
Translates to: ILTRPRGNSDTG*SLRTIAPSCSQ
Trigger: TTGTGAACAGGATGGAGCAATGGTTCTCAAACTTCAGCCAGTATCAGAATTGCCTCGAGGTCTTGTTAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR TCA 72 bp AGCTATCTGAATTTTAACAAGACCTCGAGGCAATTCTaGTACTGGCTGAAGTTTGAGAACCATTGCTCCATC +
Preference number: 3 (lower is better)
Translates to: SYLNFNKTSRQF*YWLKFENHCSI
Trigger: GATGGAGCAATGGTTCTCAAACTTCAGCCAGTATCAGAATTGCCTCGAGGTCTTGTTAAAATTCAGATAGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR TCA 72 bp CTACTCTGTACTTGTCTATATTGCAAAAGTCTTGATTaGGGTGGTGGCATTTCAGCTAGTTCCCGTGTTTCA +
Preference number: 3 (lower is better)
Translates to: LLCTCLYCKSLD*GGGISASSRVS
Trigger: TGAAACACGGGAACTAGCTGAAATGCCACCACCTCAATCAAGACTTTTGCAATATAGACAAGTACAGAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR GCA 72 bp CTGCCATATGTAACACTTCAGGCTCTCTCTAACACCTaGTGGCATGGCAGAGAATCTAAAATAACTTTGTTA +
Preference number: 3 (lower is better)
Translates to: LPYVTLQALSNT*WHGRESKITLL
Trigger: TAACAAAGTTATTTTAGATTCTCTGCCATGCCAGCAGGTGTTAGAGAGAGCCTGAAGTGTTACATATGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CAA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATGCACAATTAACCTCTaGGCTGCTAGCTTGATGCAA +
Preference number: 3 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPCTINL*AASLMQ
Trigger: TTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CAA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATGCAACCTATGTAATTaGCCACCCTTTCCCCTTTAC +
Preference number: 3 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPCNLCN*PPFPLY
Trigger: GTAAAGGGGAAAGGGTGGCAAATTACATAGGTTGCA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CAA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGCATCGCCTGGAAACTaGTTGGAAATGCAAATCATC +
Preference number: 3 (lower is better)
Translates to: LLHIASTFMGFKESGQMTASPGN*LEMQII
Trigger: GATGATTTGCATTTCCAACAAGTTTCCAGGCGATGC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CAA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTCTCTTGGCTGCTAGCTaGATGCAAACATATGTAACA +
Preference number: 3 (lower is better)
Translates to: LLHIASTFMGFKESGQMTLLAAS*MQTYVT
Trigger: TGTTACATATGTTTGCATCAAGCTAGCAGCCAAGAG...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTACGCTTATCCTGGAGCTaGCTAACCATTAACCAAAGG +
Preference number: 3 (lower is better)
Translates to: FYSCTINLLAASLMQTYVRLSWS*LTINQR
Trigger: CCTTTGGTTAATGGTTAGCAAGCTCCAGGATAAGCG...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CAA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAGAACATTTATCTAGCTaGCGTTGTAGTCCTGTATAT +
Preference number: 3 (lower is better)
Translates to: PKVGKFISFLSSSNASIKEHLSS*RCSPVY
Trigger: ATATACAGGACTACAACGCAAGCTAGATAAATGTTC...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATGTGGAAATGCTGGGTaGCTGGCTACTTCAATGTCT +
Preference number: 3 (lower is better)
Translates to: FYSCTINLLAASLMQTYVCGNAG*LATSMS
Trigger: AGACATTGAAGTAGCCAGCAACCCAGCATTTCCACA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR TCA 72 bp CCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATaGCTGGCACAGAAATCAGATACAGTACAATGTCAT +
Preference number: 3 (lower is better)
Translates to: PVPLWGLKNQVR*LAQKSDTVQCH
Trigger: ATGACATTGTACTGTATCTGATTTCTGTGCCAGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR TCA 72 bp TGTTACCATGAATCTTTGAAAACAAAAGAACTTCACTaGGACAATGAGCACACTGTAGGAACTGTAGACCCC +
Preference number: 3 (lower is better)
Translates to: CYHESLKTKELH*DNEHTVGTVDP
Trigger: GGGGTCTACAGTTCCTACAGTGTGCTCATTGTCTCAGTGAAGTTCTTTTGTTTTCAAAGATTCATGGTAACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 72 bp TCTAGGCGGTTTGAATGTGGATCAGATGGCAAAGAGTaGAGACAAATCAGATCCATTAAGACATTTATACCT +
Preference number: 3 (lower is better)
Translates to: SRRFECGSDGKE*RQIRSIKTFIP
Trigger: AGGTATAAATGTCTTAATGGATCTGATTTGTCTCCACTCTTTGCCATCTGATCCACATTCAAACCGCCTAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 72 bp TGCCATAAGTTATGCCTATTTAGATGGCTGTATAACTaGTACTTTGAAGAGATGAACCTGACCACCTCAGTT +
Preference number: 3 (lower is better)
Translates to: CHKLCLFRWLYN*YFEEMNLTTSV
Trigger: AACTGAGGTGGTCAGGTTCATCTCTTCAAAGTACCAGTTATACAGCCATCTAAATAGGCATAACTTATGGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGGATCATCAGGAAGATaGGGTTCATTCGAAAGGTTC +
Preference number: 3 (lower is better)
Translates to: FYSCTINLLAASLMQTYVGSSGR*GSFERF
Trigger: GAACCTTTCGAATGAACCCAATCTTCCTGATGATCC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CAA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTAAGACACGCCTCATTTaGATGGAAACTTGCAATGAT +
Preference number: 3 (lower is better)
Translates to: LLHIASTFMGFKESGQMTKTRLI*METCND
Trigger: ATCATTGCAAGTTTCCATCAAAATGAGGCGTGTCTT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR TCA 72 bp TTGCCTATCGAAAGTGGTCTTCCAAAAACCTGTTTTTaGATGGATCATCAGGAAGATTGGGTTCATTCGAAA +
Preference number: 3 (lower is better)
Translates to: LPIESGLPKTCF*MDHQEDWVHSK
Trigger: TTTCGAATGAACCCAATCTTCCTGATGATCCATTCAAAAACAGGTTTTTGGAAGACCACTTTCGATAGGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR TCA 72 bp GTAAATAAATACATGGTTGAAAAGACGTTCAGACTCTaGAGGTCTCTGAGACTTTCAAACTGCGAGAATCAG +
Preference number: 3 (lower is better)
Translates to: VNKYMVEKTFRL*RSLRLSNCENQ
Trigger: CTGATTCTCGCAGTTTGAAAGTCTCAGAGACCTTCAGAGTCTGAACGTCTTTTCAACCATGTATTTATTTAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 72 bp CTATCGAAAGTGGTCTTCCAAAAACCTGTTTTTGAATaGATCATCAGGAAGATTGGGTTCATTCGAAAGGTT +
Preference number: 3 (lower is better)
Translates to: LSKVVFQKPVFE*IIRKIGFIRKV
Trigger: AACCTTTCGAATGAACCCAATCTTCCTGATGATCCATTCAAAAACAGGTTTTTGGAAGACCACTTTCGATAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 72 bp AAGATACTATGCGTAAAGAGCAGGTTCTTTAAAGCATaGTTGGAAAGATGGCATTATGTAATGCTGAGGAAG +
Preference number: 3 (lower is better)
Translates to: KILCVKSRFFKA*LERWHYVMLRK
Trigger: CTTCCTCAGCATTACATAATGCCATCTTTCCAACCATGCTTTAAAGAACCTGCTCTTTACGCATAGTATCTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR-3UTR CAA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATCATTCGGATATGTCTaGAGTTTTGTCACAGACTTA +
Preference number: 3 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPSFGYV*SFVTDL
Trigger: TAAGTCTGTGACAAAACTCAAGACATATCCGAATGA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR TCA 72 bp GTTACTCTTTCAAGATGGAGATGGTGTCTTTGTAAGTaGTTGGCACCACTACGTGATATTTTGAACAAGAAA +
Preference number: 3 (lower is better)
Translates to: VTLSRWRWCLCK*LAPLRDILNKK
Trigger: TTTCTTGTTCAAAATATCACGTAGTGGTGCCAATCACTTACAAAGACACCATCTCCATCTTGAAAGAGTAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR GCA 72 bp TGTACTCAGAAGACACGCCTCATTTTGATGGAAACTTaGAATGATTCTTACACAAGACGTGTTCAAAATGTT +
Preference number: 3 (lower is better)
Translates to: CTQKTRLILMET*NDSYTRRVQNV
Trigger: AACATTTTGAACACGTCTTGTGTAAGAATCATTGCAAGTTTCCATCAAAATGAGGCGTGTCTTCTGAGTACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 72 bp CAAATCAACCTGTTTTGGTTCTGTTGGCTTTTTCTCTaGTGTTCGAATCTTATTAATTTCAGGTCCGGAATT +
Preference number: 3 (lower is better)
Translates to: QINLFWFCWLFL*CSNLINFRSGI
Trigger: AATTCCGGACCTGAAATTAATAAGATTCGAACACCAGAGAAAAAGCCAACAGAACCAAAACAGGTTGATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp TGGGTGAAATGGCTCTTGACCAATAGCATGTTGATGATTCTGTATTTGTACAAAGCTTCTACTCTGTACTaGTCTATATTGCAAAAGTCT +
Preference number: 3 (lower is better)
Translates to: WVKWLLTNSMLMILYLYKASTLY*SILQKS
Trigger: AGACTTTTGCAATATAGACAAGTACAGAGTAGAAGC...TTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGAGCCATTTCACCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAACTTTGATTATAGGATaGCCTATCGAAAGTGGTCTT +
Preference number: 3 (lower is better)
Translates to: FYSCTINLLAASLMQTYVTLIIG*PIESGL
Trigger: AAGACCACTTTCGATAGGCAATCCTATAATCAAAGT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR TCA 72 bp TCAGAAGACACGCCTCATTTTGATGGAAACTTGCAATaGTTCTTACACAAGACGTGTTCAAAATGTTATAAG +
Preference number: 3 (lower is better)
Translates to: SEDTPHFDGNLQ*FLHKTCSKCYK
Trigger: CTTATAACATTTTGAACACGTCTTGTGTAAGAATCATTGCAAGTTTCCATCAAAATGAGGCGTGTCTTCTGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 72 bp CTGCAAAGAATGCCTTTAACTCTATCCTATGGTGGATaGAGATTACAACAACACATCATACATAGTCTAAAA +
Preference number: 3 (lower is better)
Translates to: LQRMPLTLSYGG*RLQQHIIHSLK
Trigger: TTTTAGACTATGTATGATGTGTTGTTGTAATCTCCATCCACCATAGGATAGAGTTAAAGGCATTCTTTGCAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CCA 72 bp TGTCTTAAGAAAACTCCAAAGCTGTATATTCTACGATaGTCTTCACGTGTACTTTTACACCTAAGTCATTCT +
Preference number: 3 (lower is better)
Translates to: CLKKTPKLYILR*SSRVLLHLSHS
Trigger: AGAATGACTTAGGTGTAAAAGTACACGTGAAGACCATCGTAGAATATACAGCTTTGGAGTTTTCTTAAGACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR TCA 72 bp ATCTTAAAACAGGACAGATCTGTAAATAGTACTATGTaGCTTCTACTCTGTGTTGCAACCTATGTAATTTGC +
Preference number: 3 (lower is better)
Translates to: ILKQDRSVNSTM*LLLCVATYVIC
Trigger: GCAAATTACATAGGTTGCAACACAGAGTAGAAGTCACATAGTACTATTTACAGATCTGTCCTGTTTTAAGAT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR GCA 72 bp TTACACAAGACGTGTTCAAAATGTTATAAGATACTATaGGTAAAGAGCAGGTTCTTTAAAGCATGGTTGGAA +
Preference number: 3 (lower is better)
Translates to: LHKTCSKCYKIL*VKSRFFKAWLE
Trigger: TTCCAACCATGCTTTAAAGAACCTGCTCTTTACGCATAGTATCTTATAACATTTTGAACACGTCTTGTGTAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp AGGAGGGGGCCTGGGCTTTGGAGGGGCCCGCAGAGCGCTGGCATAGGACATGGCAGGCCCTGTGAAGTCTaGCATGGAGTACTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: RRGPGLWRGPQSAGIGHGRPCEV*HGVLAK
Trigger: CTTGGCCAGTACTCCATGGCAGACTTCACAGGGCCT...GCCATGTCCTATGCCAGCGCTCTGCGGGCCCCTCCAAAGCCCAGGCCCCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp AGGAGGGGGCCTGGGCTTTGGAGGGGCCCGCAGAGCGCTGGCATAGGACATGGCAATGGGGCCGGGTTGTaGAATGGCTCTCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: RRGPGLWRGPQSAGIGHGNGAGL*NGSQRT
Trigger: AGTCCTCTGAGAGCCATTGCACAACCCGGCCCCATT...GCCATGTCCTATGCCAGCGCTCTGCGGGCCCCTCCAAAGCCCAGGCCCCCTCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGGCTGCTGCTCCGGAATTACAGCTTCTGCAGGAGGAGACTGTGGCCGATGAGCGGACTGTGGCCTTCTTaGAGCATGGGAGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: GLLLRNYSFCRRRLWPMSGLWPS*SMGGGC
Trigger: GCAGCCCCCTCCCATGCTGCAAGAAGGCCACAGTCC...GCTCATCGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCGGAGCAGCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp AGGAGGGGGCCTGGGCTTTGGAGGGGCCCGCAGAGCGCTGGCATAGGACATGGCCTTTACCTTGGGTGGTaGTTGCTGCTGTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: RRGPGLWRGPQSAGIGHGLYLGW*LLLFVG
Trigger: ACCAACAAACAGCAGCAATCACCACCCAAGGTAAAG...GCCATGTCCTATGCCAGCGCTCTGCGGGCCCCTCCAAAGCCCAGGCCCCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGGCTGCTGCTCCGGAATTACAGCTTCTGCAGGAGGAGACTGTGGCCGATGAGCGGTGAGCTTCCAGTCTaGCCTCACTGGCGGCTGATG +
Preference number: 4 (lower is better)
Translates to: GLLLRNYSFCRRRLWPMSGELPV*PHWRLM
Trigger: CATCAGCCGCCAGTGAGGGCAGACTGGAAGCTCACC...GCTCATCGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCGGAGCAGCAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGGCTGCTGCTCCGGAATTACAGCTTCTGCAGGAGGAGACTGTGGCCGATGAGCAGCTCTGGGGGCTACTaGTATTGGCCGACTCCGCGA +
Preference number: 4 (lower is better)
Translates to: GLLLRNYSFCRRRLWPMSSSGGY*YWPTPR
Trigger: TCGCGGAGTCGGCCAATAGCAGTAGCCCCCAGAGCT...GCTCATCGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCGGAGCAGCAGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGAGGACATGGCGGGCTTaGCCCCCGCAGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKRTWRA*PPQSSG
Trigger: CCCAGAGCTCTGCGGGGGGCAAGCCCGCCATGTCCT...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp AGGAGGGGGCCTGGGCTTTGGAGGGGCCCGCAGAGCGCTGGCATAGGACATGGCAACAACACTAGGACGTaGTTCAGGACTTCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: RRGPGLWRGPQSAGIGHGNNTRT*FRTSVL
Trigger: CAGAACAGAAGTCCTGAATCACGTCCTAGTGTTGTT...GCCATGTCCTATGCCAGCGCTCTGCGGGCCCCTCCAAAGCCCAGGCCCCCTCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GCTTCCAGTCTGCCCTCACTGGCGGCTGATGTAATCCCAGGGGCGGCTGAGGAACTGGCTGCTTCCCACTaGCCATCAGTTTGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: ASSLPSLAADVIPGAAEELAASH*PSVCPH
Trigger: ATGAGGGCAAACTGATGGCCAGTGGGAAGCAGCCAG...TTCCTCAGCCGCCCCTGGGATTACATCAGCCGCCAGTGAGGGCAGACTGGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGGCTGCTGCTCCGGAATTACAGCTTCTGCAGGAGGAGACTGTGGCCGATGAGCGTGATGGTGTGGGTATaGAGCGCTGCCCTGACTGAG +
Preference number: 4 (lower is better)
Translates to: GLLLRNYSFCRRRLWPMSVMVWV*SAALTE
Trigger: CTCAGTCAGGGCAGCGCTCCATACCCACACCATCAC...GCTCATCGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCGGAGCAGCAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGGCTGCTGCTCCGGAATTACAGCTTCTGCAGGAGGAGACTGTGGCCGATGAGCACTGGATGGGGGAGATaGGACTGCTGGTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GLLLRNYSFCRRRLWPMSTGWGR*DCWWAS
Trigger: AGAAGCCCACCAGCAGTCCCATCTCCCCCATCCAGT...GCTCATCGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCGGAGCAGCAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp ATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTGAGCGGGTGGGAGGCGCTGTaGAAATGCTGGGTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: ILRGFDSLGWRYQLSGLSGWEAL*KCWVAG
Trigger: GCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCC...GCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GCTTCCAGTCTGCCCTCACTGGCGGCTGATGTAATCCCAGGGGCGGCTGAGGAAGGACTCTCCTGTGAGTaGCTTGGCAAGAATGGTGGA +
Preference number: 4 (lower is better)
Translates to: ASSLPSLAADVIPGAAEEGLSCE*LGKNGG
Trigger: TCCACCATTCTTGCCAAGTCACTCACAGGAGAGTCC...TTCCTCAGCCGCCCCTGGGATTACATCAGCCGCCAGTGAGGGCAGACTGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GCTTCCAGTCTGCCCTCACTGGCGGCTGATGTAATCCCAGGGGCGGCTGAGGAAGAAGCTATTCAGATGTaGAGGAAGAATGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: ASSLPSLAADVIPGAAEEEAIQM*RKNGAG
Trigger: CCCGGCCCCATTCTTCCTTCACATCTGAATAGCTTC...TTCCTCAGCCGCCCCTGGGATTACATCAGCCGCCAGTGAGGGCAGACTGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GTGTGGGTATGGAGCGCTGCCCTGACTGAGAAAGGCATGATGCTCGCTCCACTGTGGGGGAGATGGGACTaGTGGTGGGCTTCTACTCTG +
Preference number: 4 (lower is better)
Translates to: VWVWSAALTEKGMMLAPLWGRWD*WWASTL
Trigger: CAGAGTAGAAGCCCACCAGCAGTCCCATCTCCCCCA...CAGTGGAGCGAGCATCATGCCTTTCTCAGTCAGGGCAGCGCTCCATACCCACAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GCTTCCAGTCTGCCCTCACTGGCGGCTGATGTAATCCCAGGGGCGGCTGAGGAATCTGCCATGGAGTACTaGCCAAGAGAAAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: ASSLPSLAADVIPGAAEESAMEY*PRERRA
Trigger: GGCCCTTCTTTCTCTTGGCCAGTACTCCATGGCAGA...TTCCTCAGCCGCCCCTGGGATTACATCAGCCGCCAGTGAGGGCAGACTGGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGGCTGCTGCTCCGGAATTACAGCTTCTGCAGGAGGAGACTGTGGCCGATGAGCGGGAGATGGGACTGCTaGTGGGCTTCTACTCTGTAC +
Preference number: 4 (lower is better)
Translates to: GLLLRNYSFCRRRLWPMSGRWDC*WASTLY
Trigger: GTACAGAGTAGAAGCCCACCAGCAGTCCCATCTCCC...GCTCATCGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCGGAGCAGCAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GTGTGGGTATGGAGCGCTGCCCTGACTGAGAAAGGCATGATGCTCGCTCCACTGGTGGTCTGTACTGGATaGGGGAGATGGGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: VWVWSAALTEKGMMLAPLVVCTG*GRWDCW
Trigger: CCAGCAGTCCCATCTCCCCCATCCAGTACAGACCAC...CAGTGGAGCGAGCATCATGCCTTTCTCAGTCAGGGCAGCGCTCCATACCCACAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GGGCTGCTGCTCCGGAATTACAGCTTCTGCAGGAGGAGACTGTGGCCGATGAGCCAGCCTGAGCTAGAGTaGACGTTTTGCCTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: GLLLRNYSFCRRRLWPMSQPELE*TFCLSH
Trigger: ATGGGACAGGCAAAACGTTCACTCTAGCTCAGGCTG...GCTCATCGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCGGAGCAGCAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGCTTCGGCACTGCTGGTaGGCTTCCAGTCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKLRHCW*ASSLPS
Trigger: TGAGGGCAGACTGGAAGCTCACCAGCAGTGCCGAAG...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GTGTGGGTATGGAGCGCTGCCCTGACTGAGAAAGGCATGATGCTCGCTCCACTGTACCCTGAGAGGTCTTaGCTGGGGATTGCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: VWVWSAALTEKGMMLAPLYPERS*LGIACF
Trigger: GAAGCAGGCAATCCCCAGGCAAGACCTCTCAGGGTA...CAGTGGAGCGAGCATCATGCCTTTCTCAGTCAGGGCAGCGCTCCATACCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp AGGAGGGGGCCTGGGCTTTGGAGGGGCCCGCAGAGCGCTGGCATAGGACATGGCGTTATAGGCCATTGCTaGCTGATGTGTAATAATTCG +
Preference number: 4 (lower is better)
Translates to: RRGPGLWRGPQSAGIGHGVIGHC*LMCNNS
Trigger: CGAATTATTACACATCAGGCAGCAATGGCCTATAAC...GCCATGTCCTATGCCAGCGCTCTGCGGGCCCCTCCAAAGCCCAGGCCCCCTCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGAGGACATGGCGGGCTTaGCCCCCGCAGAGCTCTGGG +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRRTWRA*PPQSSG
Trigger: CCCAGAGCTCTGCGGGGGGCAAGCCCGCCATGTCCT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GGGCTGCTGCTCCGGAATTACAGCTTCTGCAGGAGGAGACTGTGGCCGATGAGCCTGAGAGGTCTTGCCTaGGGATTGCCTGCTTCTACA +
Preference number: 4 (lower is better)
Translates to: GLLLRNYSFCRRRLWPMSLRGLA*GLPAST
Trigger: TGTAGAAGCAGGCAATCCCCAGGCAAGACCTCTCAG...GCTCATCGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCGGAGCAGCAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GCTTCCAGTCTGCCCTCACTGGCGGCTGATGTAATCCCAGGGGCGGCTGAGGAAGGGGCATCTGAAAGGTaGAATGTGCGCTTGAGATCA +
Preference number: 4 (lower is better)
Translates to: ASSLPSLAADVIPGAAEEGASER*NVRLRS
Trigger: TGATCTCAAGCGCACATTCCACCTTTCAGATGCCCC...TTCCTCAGCCGCCCCTGGGATTACATCAGCCGCCAGTGAGGGCAGACTGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GCTTCCAGTCTGCCCTCACTGGCGGCTGATGTAATCCCAGGGGCGGCTGAGGAAGAAATCTTTGTGTGCTaGCTGCTTCCCACTGGCCAT +
Preference number: 4 (lower is better)
Translates to: ASSLPSLAADVIPGAAEEEIFVC*LLPTGH
Trigger: ATGGCCAGTGGGAAGCAGCCAGCACACAAAGATTTC...TTCCTCAGCCGCCCCTGGGATTACATCAGCCGCCAGTGAGGGCAGACTGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GCTTCCAGTCTGCCCTCACTGGCGGCTGATGTAATCCCAGGGGCGGCTGAGGAAAGATGGGACTGCTGGTaGGCTTCTACTCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: ASSLPSLAADVIPGAAEERWDCW*ASTLYL
Trigger: CAAGTACAGAGTAGAAGCCCACCAGCAGTCCCATCT...TTCCTCAGCCGCCCCTGGGATTACATCAGCCGCCAGTGAGGGCAGACTGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GCTTCCAGTCTGCCCTCACTGGCGGCTGATGTAATCCCAGGGGCGGCTGAGGAAATAAGGGGTGGAAACTaGCCAAGATGCTGCAGCACA +
Preference number: 4 (lower is better)
Translates to: ASSLPSLAADVIPGAAEEIRGGN*PRCCST
Trigger: TGTGCTGCAGCATCTTGGCCAGTTTCCACCCCTTAT...TTCCTCAGCCGCCCCTGGGATTACATCAGCCGCCAGTGAGGGCAGACTGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GGACACCTCGAGGTTCTCCGACTTCAGTTGATCCTCAGGGGGTTTGACAGTCTTTTCTGCGGTGGCCTGTaGGGCAATGGAGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: GHLEVLRLQLILRGFDSLFCGGL*GNGGRP
Trigger: TGGCCTACCTCCATTGCCTCACAGGCCACCGCAGAA...AAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGGGTGGTGGGCGGAAATaGCAACCATTACAAGACCCC +
Preference number: 4 (lower is better)
Translates to: QFLEERQRVATLLGLLRRGGGRK*QPLQDP
Trigger: GGGGTCTTGTAATGGTTGGCATTTCCGCCCACCACC...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGAGGCGGCAGCTGGATTaGAAGTGGAGTGGTAATGGC +
Preference number: 4 (lower is better)
Translates to: QFLEERQRVATLLGLLRRRRQLD*KWSGNG
Trigger: GCCATTACCACTCCACTTGCAATCCAGCTGCCGCCT...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp ATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTGAGCGTACTTCCTGAATGCTaGAGTCTTAGAGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: ILRGFDSLGWRYQLSGLSVLPEC*SLRARG
Trigger: CCCCCGGGCTCTAAGACTGCAGCATTCAGGAAGTAC...GCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp ATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTGAGCGTGGCGATTAGGGATTaGATACTGTGCGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: ILRGFDSLGWRYQLSGLSVAIRD*ILCVGS
Trigger: GCTCCCCACGCACAGTATGCAATCCCTAATCGCCAC...GCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGGCCGACTCCGCGATCTaGTTGTTAGGCATAAGGGGT +
Preference number: 4 (lower is better)
Translates to: QFLEERQRVATLLGLLRRADSAI*LLGIRG
Trigger: ACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGC...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGGCTACTGCTATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAGCCGACCAGGTCCTCTaGGCTCATACTCTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: GLLLLADSAICLLGIRGGADQVL*AHTLLS
Trigger: GCTTAGAAGAGTATGAGCCCAGAGGACCTGGTCGGC...TCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCTCTGCGCTGAGCTGTCCTGCTaGATCCATTGCACGGAATGT +
Preference number: 4 (lower is better)
Translates to: GVGGAVEMLGCWLLQCLCAELSC*IHCTEC
Trigger: ACATTCCGTGCAATGGATCCAGCAGGACAGCTCAGC...GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CAA 72 bp GAAGGAACTGGACACCTCGAGGTTCTCCGACTTCAGTaGATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: EGTGHLEVLRLQ*ILRGFDSLGWR
Trigger: GCGCCACCCAAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCCAGTTCCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CAA 72 bp TGGGGGCTACTGCTATTGGCCGACTCCGCGATCTGCTaGTTAGGCATAAGGGGTGGAAACTGGCCAAGATGC +
Preference number: 4 (lower is better)
Translates to: WGLLLLADSAIC*LGIRGGNWPRC
Trigger: GCATCTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCTCTGCTTCCTGGGAATGTGCTaGAGTACACTGGGCACCATA +
Preference number: 4 (lower is better)
Translates to: GVGGAVEMLGCWLLQCLCFLGMC*STLGTI
Trigger: TATGGTGCCCAGTGTACTTCAGCACATTCCCAGGAA...GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GCTTCCAGTCTGCCCTCACTGGCGGCTGATGTAATCCCAGGGGCGGCTGAGGAAAGATACTGTTCGAGATaGCAATGGGTGAAATGGCTC +
Preference number: 4 (lower is better)
Translates to: ASSLPSLAADVIPGAAEERYCSR*QWVKWL
Trigger: GAGCCATTTCACCCATTGTCATCTCGAACAGTATCT...TTCCTCAGCCGCCCCTGGGATTACATCAGCCGCCAGTGAGGGCAGACTGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp AAGGGGATGAAAGTGGCGATTAGGGATTGCATACTGTGCGTGGGGAGCAGGAAGAGCATGGGAGGGGGCTaGTGCTCCGGAATTACAGCT +
Preference number: 4 (lower is better)
Translates to: KGMKVAIRDCILCVGSRKSMGGG*CSGITA
Trigger: AGCTGTAATTCCGGAGCAGCAGCCCCCTCCCATGCT...CTTCCTGCTCCCCACGCACAGTATGCAATCCCTAATCGCCACTTTCATCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGTGTGATTCCCCTAGGTaGTGGGCGGAAATGCCAACC +
Preference number: 4 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKCDSPR*WAEMPT
Trigger: GGTTGGCATTTCCGCCCACCACCTAGGGGAATCACA...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GCTTCCAGTCTGCCCTCACTGGCGGCTGATGTAATCCCAGGGGCGGCTGAGGAAGCAGAGAGGGGAATTTaGTATCTGATAAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: ASSLPSLAADVIPGAAEEAERGI*YLIRRL
Trigger: GAGCCTTCTTATCAGATACCAAATTCCCCTCTCTGC...TTCCTCAGCCGCCCCTGGGATTACATCAGCCGCCAGTGAGGGCAGACTGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GCTTCCAGTCTGCCCTCACTGGCGGCTGATGTAATCCCAGGGGCGGCTGAGGAAGAAGGTTTCTCTCCCTaGCAAACTCGCTGTAAACAA +
Preference number: 4 (lower is better)
Translates to: ASSLPSLAADVIPGAAEEEGFSP*QTRCKQ
Trigger: TTGTTTACAGCGAGTTTGCCAGGGAGAGAAACCTTC...TTCCTCAGCCGCCCCTGGGATTACATCAGCCGCCAGTGAGGGCAGACTGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCTCTGCGAAAAGTGGCTACTGTaGTCTGTACTGGATGGGGGA +
Preference number: 4 (lower is better)
Translates to: GVGGAVEMLGCWLLQCLCEKWLL*SVLDGG
Trigger: TCCCCCATCCAGTACAGACCACAGTAGCCACTTTTC...GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGGGTGGGAGGCGCTGTaGAAATGCTGGGTTGCTGGC +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRGWEAL*KCWVAG
Trigger: GCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCGGGCCCGCAGAGCGCTaGCATAGGACATGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: YSAADLTRCAAVELERVVGPAER*HRTWRA
Trigger: AGCCCGCCATGTCCTATGCCAGCGCTCTGCGGGCCC...GACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GGGCTGCTGCTCCGGAATTACAGCTTCTGCAGGAGGAGACTGTGGCCGATGAGCTTCTGGGACTTCTTGTaGTACCTGGGTAGTACTATC +
Preference number: 4 (lower is better)
Translates to: GLLLRNYSFCRRRLWPMSFWDFL*YLGSTI
Trigger: GATAGTACTACCCAGGTATCACAAGAAGTCCCAGAA...GCTCATCGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCGGAGCAGCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGGCTGCTGCTCCGGAATTACAGCTTCTGCAGGAGGAGACTGTGGCCGATGAGCACGATACAGCATTCTTaGAGGCTTACAAGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: GLLLRNYSFCRRRLWPMSTIQHS*RLTSES
Trigger: GCTCTCACTTGTAAGCCTGCAAGAATGCTGTATCGT...GCTCATCGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCGGAGCAGCAGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGTCTTTGTGTGCTGGCTaGTTCCCACTGGCCATCAGT +
Preference number: 4 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKSLCAG*FPLAIS
Trigger: ACTGATGGCCAGTGGGAAGCAGCCAGCACACAAAGA...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp AAGGGGATGAAAGTGGCGATTAGGGATTGCATACTGTGCGTGGGGAGCAGGAAGGAGGCGCTGTGGAAATaGTGGGTTGCTGGCTACTTC +
Preference number: 4 (lower is better)
Translates to: KGMKVAIRDCILCVGSRKEALWK*WVAGYF
Trigger: GAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTC...CTTCCTGCTCCCCACGCACAGTATGCAATCCCTAATCGCCACTTTCATCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCTCTGCGTTAGCAAAAGTCCATaGTCCATCAGGTGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: GVGGAVEMLGCWLLQCLCVSKSP*SIRCQV
Trigger: TACCTGGCACCTGATGGAGCATGGACTTTTGCTAAC...GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGGCTACTGCTATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAACTAAACAAGCTCCTTaGAGAAACCGCTTGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GLLLLADSAICLLGIRGGTKQAP*RNRLPP
Trigger: TGGCGGCAAGCGGTTTCTGCAAGGAGCTTGTTTAGT...TCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGGCTACTGCTATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAATGGTGGATACAGGTTaGAGCTTCCCTTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLLLLADSAICLLGIRGGMVDTG*SFPFSC
Trigger: GCAGCTGAAAGGGAAGCTCCAACCTGTATCCACCAT...TCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGGCCGGGTTGTGCAATaGCTCTCAGAGGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRGRVVQ*LSEDCG
Trigger: GCCACAGTCCTCTGAGAGCCATTGCACAACCCGGCC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCTTGGTATGCTCGCTCCACTGCTaGAACCGTGCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: AADLTRCAAVELERVVLVCSLHC*NRACCC
Trigger: GCAGCAGCAGGCACGGTTCCAGCAGTGGAGCGAGCA...TACCAAGACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp CTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGATGCTGCAGCACACTGTAAGGATGGTGATGGTGTaGGTATGGAGCGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: LLVRHKGWKLAKMLQHTVRMVMV*VWSAAL
Trigger: CAGGGCAGCGCTCCATACCCACACCATCACCATCCT...TACAGTGTGCTGCAGCATCTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp AAGGGGATGAAAGTGGCGATTAGGGATTGCATACTGTGCGTGGGGAGCAGGAAGAAAAGGGTTCTGCGGTaGCCTGTGAGGCAATGGAGG +
Preference number: 4 (lower is better)
Translates to: KGMKVAIRDCILCVGSRKKRVLR*PVRQWR
Trigger: CCTCCATTGCCTCACAGGCCACCGCAGAACCCTTTT...CTTCCTGCTCCCCACGCACAGTATGCAATCCCTAATCGCCACTTTCATCCCCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp ATATCTGGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTTCAGGGACTCTCCTGTaGGTGACTTGGCAAGAATGG +
Preference number: 4 (lower is better)
Translates to: ISGVGGAVEMLGCWLLQCSGTLL*VTWQEW
Trigger: CCATTCTTGCCAAGTCACTCACAGGAGAGTCCCTGA...ACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCCAGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCTCTGCACAATCCGAGTGTTTTaGGTTGCTAATGCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: GVGGAVEMLGCWLLQCLCTIRVF*VANARG
Trigger: GCCTCTAGCATTAGCAACTCAAAACACTCGGATTGT...GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GTGTGGGTATGGAGCGCTGCCCTGACTGAGAAAGGCATGATGCTCGCTCCACTGACAGAAGGATTGGGCTaGACAATTCCATCATTCTGG +
Preference number: 4 (lower is better)
Translates to: VWVWSAALTEKGMMLAPLTEGLG*TIPSFW
Trigger: CCAGAATGATGGAATTGTTCAGCCCAATCCTTCTGT...CAGTGGAGCGAGCATCATGCCTTTCTCAGTCAGGGCAGCGCTCCATACCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp ATATCTGGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTTTTCCCAAATTTGGGTaGGGTCCAAGAGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: ISGVGGAVEMLGCWLLQCFPKFG*GPRGGG
Trigger: TCCACCCCCTCTTGGACCTCACCCAAATTTGGGAAA...ACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCCAGATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGCCAGGACTCCGGGGATaGAAAGTTGAAAGAAGATTG +
Preference number: 4 (lower is better)
Translates to: QFLEERQRVATLLGLLRRPGLRG*KVERRL
Trigger: CAATCTTCTTTCAACTTTTCATCCCCGGAGTCCTGG...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGCACAGCTTCCAGACTaGTGTCCAGGCAGCAGCGTA +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRAQLPD*CPGSSV
Trigger: TACGCTGCTGCCTGGACATCAGTCTGGAAGCTGTGC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ATATCTGGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTTCCCTTTCAGCTGCATaGAGCAAAGCACTGCCCGAA +
Preference number: 4 (lower is better)
Translates to: ISGVGGAVEMLGCWLLQCSLSAA*SKALPE
Trigger: TTCGGGCAGTGCTTTGCTGCATGCAGCTGAAAGGGA...ACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCCAGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGGCTACTGCTATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGACACTGGCCATCAGTTTaGCCTCATAGAAAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: GLLLLADSAICLLGIRGGHWPSV*PHRKAQ
Trigger: CTGAGCTTTTCTATGAGGGCAAACTGATGGCCAGTG...TCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp ATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTGAGCTCACCACACCAATACTaGCATCATCTAACTTCCCCC +
Preference number: 4 (lower is better)
Translates to: ILRGFDSLGWRYQLSGLSSPHQY*HHLTSP
Trigger: GGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGA...GCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGGCTGCTGCTCCGGAATTACAGCTTCTGCAGGAGGAGACTGTGGCCGATGAGCGGGTGGAGGAGTATATaGTCTAATAGGATTGCCAAT +
Preference number: 4 (lower is better)
Translates to: GLLLRNYSFCRRRLWPMSGWRSI*SNRIAN
Trigger: ATTGGCAATCCTATTAGAGCATATACTCCTCCACCC...GCTCATCGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCGGAGCAGCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGGTGGAAATGCTGGGTTaGTGGCTACTTCAATGTCTC +
Preference number: 4 (lower is better)
Translates to: QFLEERQRVATLLGLLRRVEMLG*WLLQCL
Trigger: GAGACATTGAAGTAGCCAGCAACCCAGCATTTCCAC...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGGCTGCTGCTCCGGAATTACAGCTTCTGCAGGAGGAGACTGTGGCCGATGAGCTTCTCTTTGGTTCCCTaGGTCTGTACTAACTTCTGT +
Preference number: 4 (lower is better)
Translates to: GLLLRNYSFCRRRLWPMSFSLVP*VCTNFC
Trigger: ACAGAAGTTAGTACAGACCCAGGGAACCAAAGAGAA...GCTCATCGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCGGAGCAGCAGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp ATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTGAGCTCACACTCCATGGCCTaGGCAGCTTCATCTAATAGA +
Preference number: 4 (lower is better)
Translates to: ILRGFDSLGWRYQLSGLSSHSMA*AASSNR
Trigger: TCTATTAGATGAAGCTGCCCAGGCCATGGAGTGTGA...GCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GCTTCCAGTCTGCCCTCACTGGCGGCTGATGTAATCCCAGGGGCGGCTGAGGAATCTTTGAACAGGGCTTaGAGATTTTCCCAAATTTGG +
Preference number: 4 (lower is better)
Translates to: ASSLPSLAADVIPGAAEESLNRA*RFSQIW
Trigger: CCAAATTTGGGAAAATCTCCAAGCCCTGTTCAAAGA...TTCCTCAGCCGCCCCTGGGATTACATCAGCCGCCAGTGAGGGCAGACTGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGCTGATGCTGATTTTGTaGCTGGCCTATGGTGACAGG +
Preference number: 4 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKLMLIL*LAYGDR
Trigger: CCTGTCACCATAGGCCAGCCACAAAATCAGCATCAG...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp ATATCTGGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTATTGCATACTGTGCGTaGGGAGCAGGAAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: ISGVGGAVEMLGCWLLQCIAYCA*GAGRGR
Trigger: TCTTCCCCTTCCTGCTCCCCACGCACAGTATGCAAT...ACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCCAGATAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCTTGGTAGGCCGGGTTGTGCAATaGCTCTCAGAGGACTGTGGC +
Preference number: 4 (lower is better)
Translates to: AADLTRCAAVELERVVLVGRVVQ*LSEDCG
Trigger: GCCACAGTCCTCTGAGAGCCATTGCACAACCCGGCC...TACCAAGACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGAGGATGGTGATGGTGTaGGTATGGAGCGCTGCCCTG +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRRMVMV*VWSAAL
Trigger: CAGGGCAGCGCTCCATACCCACACCATCACCATCCT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTGTGGTCTGTACTGGATaGGGGAGATGGGACTGCTGG +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETVVCTG*GRWDCW
Trigger: CCAGCAGTCCCATCTCCCCCATCCAGTACAGACCAC...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGGTTAGGCATAAGGGGTaGAAACTGGCCAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKVRHKG*KLAKML
Trigger: CAGCATCTTGGCCAGTTTCCACCCCTTATGCCTAAC...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGAGTGAGGAGGGGTGGTaGCCAATCCAAAGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRSEEGW*PIQRAC
Trigger: ACAGGCCCTTTGGATTGGCCACCACCCCTCCTCACT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp ATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTGAGCACAGAGGCTTTACCTTaGGTGGTGATTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: ILRGFDSLGWRYQLSGLSTEALP*VVIAAV
Trigger: AACAGCAGCAATCACCACCCAAGGTAAAGCCTCTGT...GCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCTCTGCACATGCTTGTTCACATaGCTTTTCAGCTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: GVGGAVEMLGCWLLQCLCTCLFT*LFSSSV
Trigger: GACAGAAGAGCTGAAAAGTCATGTGAACAAGCATGT...GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp CTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGATGCTGCAGCACACTGTACCTCTGTGCAGTGCTTaGGGGCCATTTCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: LLVRHKGWKLAKMLQHTVPLCSA*GPFHSP
Trigger: AGGACTATGAAATGGCCCTCAAGCACTGCACAGAGG...TACAGTGTGCTGCAGCATCTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGAAACCCCATTGTCCTTaGTCCTGTCTAGTGCATAGT +
Preference number: 4 (lower is better)
Translates to: QFLEERQRVATLLGLLRRKPHCP*SCLVHS
Trigger: ACTATGCACTAGACAGGATCAAGGACAATGGGGTTT...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGGGAGACTGTGGCCGATaGGCAACTGCACTATTAAAA +
Preference number: 4 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKGDCGR*ATALLK
Trigger: TTTTAATAGTGCAGTTGCTCATCGGCCACAGTCTCC...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCTTGGTAGATCCTCAGGGGGTTTaGCAGTCTTGGGTGGCGCTA +
Preference number: 4 (lower is better)
Translates to: AADLTRCAAVELERVVLVDPQGV*QSWVAL
Trigger: TAGCGCCACCCAAGACTGTCAAACCCCCTGAGGATC...TACCAAGACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGAGGCGGCAGCTGGATTaGAAGTGGAGTGGTAATGGC +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRRRQLD*KWSGNG
Trigger: GCCATTACCACTCCACTTGCAATCCAGCTGCCGCCT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp GGACACCTCGAGGTTCTCCGACTTCAGTTGATCCTCAGGGGGTTTGACAGTCTTTTGGTACTTCCTGAATaGTGCAGTCTTAGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: GHLEVLRLQLILRGFDSLLVLPE*CSLRAR
Trigger: CCGGGCTCTAAGACTGCAGCATTCAGGAAGTACCAA...AAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGAGGCGCTGTGGAAATaGTGGGTTGCTGGCTACTTC +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIREALWK*WVAGYF
Trigger: GAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGTCCTGCTGGATCCATTaGACGGAATGTTCTGATAAG +
Preference number: 4 (lower is better)
Translates to: QFLEERQRVATLLGLLRRSCWIH*TECSDK
Trigger: CTTATCAGAACATTCCGTGCAATGGATCCAGCAGGA...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGCCGACTCCGCGATCTaGTTGTTAGGCATAAGGGGT +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRADSAI*LLGIRG
Trigger: ACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGAGTGAGCCGAGATCATaGCACTGTACTCCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRSEPRS*HCTPAR
Trigger: CCTGGCTGGAGTACAGTGGCATGATCTCGGCTCACT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGATGCTGCAGCACACTGTAGATTCCCCTAGGTGGTaGGCGGAAATGCCAACCATT +
Preference number: 4 (lower is better)
Translates to: LLVRHKGWKLAKMLQHTVDSPRW*AEMPTI
Trigger: AATGGTTGGCATTTCCGCCCACCACCTAGGGGAATC...TACAGTGTGCTGCAGCATCTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGGCTACTGCTATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGATCTGCTAGTTCTTCCTaGGAATGTGCTGAAGTACAC +
Preference number: 4 (lower is better)
Translates to: GLLLLADSAICLLGIRGGSASSS*ECAEVH
Trigger: GTGTACTTCAGCACATTCCCAGGAAGAACTAGCAGA...TCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGGCTACTGCTATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAACTTCTTGTGATACCTaGGTAGTACTATCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: GLLLLADSAICLLGIRGGTSCDT*VVLSPA
Trigger: TGCCGGAGATAGTACTACCCAGGTATCACAAGAAGT...TCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp ATATCTGGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCAAGGTGTGCTGCTGTaGAATTGGAAAGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: ISGVGGAVEMLGCWLLQCQGVLL*NWKGWS
Trigger: AGACCACCCTTTCCAATTCCACAGCAGCACACCTTG...ACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCCAGATAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTGCTCTCAGAGGACTGTaGCCTTCTTGCAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETALRGL*PSCSMG
Trigger: TCCCATGCTGCAAGAAGGCCACAGTCCTCTGAGAGC...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GGGCTACTGCTATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAGAAACCTTGAGTATGTaGTCTCCACTTCATCTTCGG +
Preference number: 4 (lower is better)
Translates to: GLLLLADSAICLLGIRGGETLSM*SPLHLR
Trigger: CCGAAGATGAAGTGGAGACCACATACTCAAGGTTTC...TCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGGGAGATGGGACTGCTaGTGGGCTTCTACTCTGTAC +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRGRWDC*WASTLY
Trigger: GTACAGAGTAGAAGCCCACCAGCAGTCCCATCTCCC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGCCGACCAGGTCCTCTaGGCTCATACTCTTCTAAGC +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRADQVL*AHTLLS
Trigger: GCTTAGAAGAGTATGAGCCCAGAGGACCTGGTCGGC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAGGGGGCCTGGGCTTTaGAGGGGCCCGCAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPRGPGL*RGPQSA
Trigger: AGCGCTCTGCGGGCCCCTCCAAAGCCCAGGCCCCCT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGCTCAGGAGGGGGCCTaGGCTTTGGAGGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPAQEGA*ALEGPA
Trigger: TGCGGGCCCCTCCAAAGCCCAGGCCCCCTCCTGAGC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGCCTAGGCTCAGTTCCTaGAAGAGAGACAGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRPRLSS*KRDRGS
Trigger: CGACCCTCTGTCTCTCTTCCAGGAACTGAGCCTAGG...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGGACTCTCCTGTGAGTaGCTTGGCAAGAATGGTGGA +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRGLSCE*LGKNGG
Trigger: TCCACCATTCTTGCCAAGTCACTCACAGGAGAGTCC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp ATATCTGGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTTCTAAGTCTTCCACGTaGTATCCAGAGAGGGCGTTA +
Preference number: 4 (lower is better)
Translates to: ISGVGGAVEMLGCWLLQCSKSST*YPERAL
Trigger: TAACGCCCTCTCTGGATATCACGTGGAAGACTTAGA...ACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCCAGATAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp AAGGGGATGAAAGTGGCGATTAGGGATTGCATACTGTGCGTGGGGAGCAGGAAGTTGCAGGCTTACAAGTaGGAGCAAAGGTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: KGMKVAIRDCILCVGSRKLQAYK*EQRSMS
Trigger: AGACATGGACCTTTGCTCTCACTTGTAAGCCTGCAA...CTTCCTGCTCCCCACGCACAGTATGCAATCCCTAATCGCCACTTTCATCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp ATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTGAGCTTGTCTAAAACGGACTaGGTAAATAGCTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: ILRGFDSLGWRYQLSGLSLSKTD*VNSWSA
Trigger: TGCTGACCAGCTATTTACTCAGTCCGTTTTAGACAA...GCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTCAGCCTGAGCTAGAGTaGACGTTTTGCCTGTCCCAT +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETQPELE*TFCLSH
Trigger: ATGGGACAGGCAAAACGTTCACTCTAGCTCAGGCTG...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGAAGCTATTCAGATGTaGAGGAAGAATGGGGCCGGG +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIREAIQM*RKNGAG
Trigger: CCCGGCCCCATTCTTCCTTCACATCTGAATAGCTTC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGCAGCACACTGTAGTTaGAGGAACTGGACACCTCGA +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRAAHCS*RNWTPR
Trigger: TCGAGGTGTCCAGTTCCTTCAACTACAGTGTGCTGC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp GGACACCTCGAGGTTCTCCGACTTCAGTTGATCCTCAGGGGGTTTGACAGTCTTCAGGGACAAAAATCCTaGAGTTCACTGCACTGGGTA +
Preference number: 4 (lower is better)
Translates to: GHLEVLRLQLILRGFDSLQGQKS*SSLHWV
Trigger: TACCCAGTGCAGTGAACTGCAGGATTTTTGTCCCTG...AAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTTCCCTTTCAGCTGCATaGAGCAAAGCACTGCCCGAA +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETSLSAA*SKALPE
Trigger: TTCGGGCAGTGCTTTGCTGCATGCAGCTGAAAGGGA...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp GGGCTGCTGCTCCGGAATTACAGCTTCTGCAGGAGGAGACTGTGGCCGATGAGCATCTCCGGCAGATATTaGAATGATACTAAAATGAGG +
Preference number: 4 (lower is better)
Translates to: GLLLRNYSFCRRRLWPMSISGRY*NDTKMR
Trigger: CCTCATTTTAGTATCATTGCAATATCTGCCGGAGAT...GCTCATCGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCGGAGCAGCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGGCTACTGCTATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAGCTGCTGTTTTGCATaGATCAGGTATTCGAGATCT +
Preference number: 4 (lower is better)
Translates to: GLLLLADSAICLLGIRGGSCCFA*IRYSRS
Trigger: AGATCTCGAATACCTGATGCATGCAAAACAGCAGCT...TCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp ATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTGAGCGACTGTCTTGAGGAGTaGTTACTTCTTCAGAACAAG +
Preference number: 4 (lower is better)
Translates to: ILRGFDSLGWRYQLSGLSDCLEE*LLLQNK
Trigger: CTTGTTCTGAAGAAGTAAGCACTCCTCAAGACAGTC...GCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGACACCTCGAGGTTCTCCGACTTCAGTTGATCCTCAGGGGGTTTGACAGTCTTGTACTGATGCACAACTaGGTGGACAGTCTTTACCCA +
Preference number: 4 (lower is better)
Translates to: GHLEVLRLQLILRGFDSLVLMHN*VDSLYP
Trigger: TGGGTAAAGACTGTCCACCCAGTTGTGCATCAGTAC...AAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp ATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTGAGCATTGCTGCTGTTTGTTaGTACTTCCTGAATGCTGCA +
Preference number: 4 (lower is better)
Translates to: ILRGFDSLGWRYQLSGLSIAAVC*YFLNAA
Trigger: TGCAGCATTCAGGAAGTACCAACAAACAGCAGCAAT...GCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTATTGCATACTGTGCGTaGGGAGCAGGAAGGGGAAGA +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETIAYCA*GAGRGR
Trigger: TCTTCCCCTTCCTGCTCCCCACGCACAGTATGCAAT...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTGCTGAGCTGTCCTGCTaGATCCATTGCACGGAATGT +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETAELSC*IHCTEC
Trigger: ACATTCCGTGCAATGGATCCAGCAGGACAGCTCAGC...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCGCGCTATCAACTCTCTaGGCTGAGCTGTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: YSAADLTRCAAVELERVVALSTL*AELSCW
Trigger: CCAGCAGGACAGCTCAGCCCAGAGAGTTGATAGCGC...GACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGGGCCCGCAGAGCGCTaGCATAGGACATGGCGGGCT +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTGPAER*HRTWRA
Trigger: AGCCCGCCATGTCCTATGCCAGCGCTCTGCGGGCCC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGGCAGCACTATTAGAATaGGTGCAAATGAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: QFLEERQRVATLLGLLRRAALLE*VQMRIL
Trigger: CAGGATTCTCATTTGCACCCATTCTAATAGTGCTGC...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GGTCCTGAAGCTCTTTACACTGAGCCAGACTGTCTTGAGGAGTGCTTACTTCTTGGTGCTGACAGTAACTaGCAGGTCAGGATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: GPEALYTEPDCLEECLLLGADSN*QVRIVL
Trigger: GAGCACAATCCTGACCTGTCAGTTACTGTCAGCACC...AAGAAGTAAGCACTCCTCAAGACAGTCTGGCTCAGTGTAAAGAGCTTCAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GTGTGGGTATGGAGCGCTGCCCTGACTGAGAAAGGCATGATGCTCGCTCCACTGATAAATAAACAGCATTaGCTTTGGTCATCACCAGTC +
Preference number: 4 (lower is better)
Translates to: VWVWSAALTEKGMMLAPLINKQH*LWSSPV
Trigger: GACTGGTGATGACCAAAGTCAATGCTGTTTATTTAT...CAGTGGAGCGAGCATCATGCCTTTCTCAGTCAGGGCAGCGCTCCATACCCACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GGACACCTCGAGGTTCTCCGACTTCAGTTGATCCTCAGGGGGTTTGACAGTCTTTCAAGTAATGAAACGTaGAGGTTTCTCTCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: GHLEVLRLQLILRGFDSLSSNET*RFLSLA
Trigger: TGCCAGGGAGAGAAACCTTCACGTTTCATTACTTGA...AAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGTTTCCCCTTGGGTGGTaGTTGCTGCTGTTTGTTGGT +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRFPLGW*LLLFVG
Trigger: ACCAACAAACAGCAGCAATCACCACCCAAGGGGAAA...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGGATGAGACAGTTCTCTaGTTAAGTCTTGAAACCTTG +
Preference number: 4 (lower is better)
Translates to: QFLEERQRVATLLGLLRRDETVL*LSLETL
Trigger: CAAGGTTTCAAGACTTAATCAGAGAACTGTCTCATC...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGACACCTCGAGGTTCTCCGACTTCAGTTGATCCTCAGGGGGTTTGACAGTCTTAGCAACCAGGGATTGTaGTCTTGTGATGGCAGTATT +
Preference number: 4 (lower is better)
Translates to: GHLEVLRLQLILRGFDSLSNQGL*SCDGSI
Trigger: AATACTGCCATCACAAGAGCACAATCCCTGGTTGCT...AAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGACACCTCGAGGTTCTCCGACTTCAGTTGATCCTCAGGGGGTTTGACAGTCTTGGGGATAAATTCAGGTaGCAGCGGATTCAACACATA +
Preference number: 4 (lower is better)
Translates to: GHLEVLRLQLILRGFDSLGDKFR*QRIQHI
Trigger: TATGTGTTGAATCCGCTGGCACCTGAATTTATCCCC...AAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTTATAAGGTGATGGGGTaGATACACGACCCCATGACC +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETYKVMG*IHDPMT
Trigger: GGTCATGGGGTCGTGTATGCACCCCATCACCTTATA...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGAAAAACAAATCCTTTaGCCTCACCACCCTCCCCCA +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIREKQIL*PHHPPP
Trigger: TGGGGGAGGGTGGTGAGGGCAAAGGATTTGTTTTTC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGATGGTGGATACAGGTTaGAGCTTCCCTTTCAGCTGC +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRMVDTG*SFPFSC
Trigger: GCAGCTGAAAGGGAAGCTCCAACCTGTATCCACCAT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp AAGGGGATGAAAGTGGCGATTAGGGATTGCATACTGTGCGTGGGGAGCAGGAAGTCTGTTAGGACTCCATaGTATGGTGGGAGTCATACT +
Preference number: 4 (lower is better)
Translates to: KGMKVAIRDCILCVGSRKSVRTP*YGGSHT
Trigger: AGTATGACTCCCACCATACCATGGAGTCCTAACAGA...CTTCCTGCTCCCCACGCACAGTATGCAATCCCTAATCGCCACTTTCATCCCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTGGGGCATCTGAAAGGTaGAATGTGCGCTTGAGATCA +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETGASER*NVRLRS
Trigger: TGATCTCAAGCGCACATTCCACCTTTCAGATGCCCC...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGAATCTAAGTCCTCTGTaGAATCTTCCAGAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: QFLEERQRVATLLGLLRRNLSPL*NLPEVA
Trigger: AGCAACTTCTGGAAGATTCCACAGAGGACTTAGATT...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGTCCTGAAGCTCTTTACACTGAGCCAGACTGTCTTGAGGAGTGCTTACTTCTTGCCTATGGTGACAGGTaGGTGATGTCCAAGGCCATA +
Preference number: 4 (lower is better)
Translates to: GPEALYTEPDCLEECLLLAYGDR*VMSKAI
Trigger: TATGGCCTTGGACATCACCCACCTGTCACCATAGGC...AAGAAGTAAGCACTCCTCAAGACAGTCTGGCTCAGTGTAAAGAGCTTCAGGACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGAGATGGGACTGCTGGTaGGCTTCTACTCTGTACTTG +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRRWDCW*ASTLYL
Trigger: CAAGTACAGAGTAGAAGCCCACCAGCAGTCCCATCT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGATGCTGCAGCACACTGTAGAAATGCTGGGTTGCTaGCTACTTCAATGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LLVRHKGWKLAKMLQHTVEMLGC*LLQCLC
Trigger: GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTC...TACAGTGTGCTGCAGCATCTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTTTTGACAGTCTTGGGTaGCGCTATCAACTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETFDSLG*RYQLSG
Trigger: CCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAA...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTATAAGGGGTGGAAACTaGCCAAGATGCTGCAGCACA +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETIRGGN*PRCCST
Trigger: TGTGCTGCAGCATCTTGGCCAGTTTCCACCCCTTAT...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTGTTAGGCATAAGGGGTaGAAACTGGCCAAGATGCTG +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETVRHKG*KLAKML
Trigger: CAGCATCTTGGCCAGTTTCCACCCCTTATGCCTAAC...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAGGGGGCTACTGCTATTaGCCGACTCCGCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKGGYCY*PTPRSA
Trigger: AGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCCCC...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAAGGGGGCCTGGGCTTTaGAGGGGCCCGCAGAGCGCT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVRGPGL*RGPQSA
Trigger: AGCGCTCTGCGGGCCCCTCCAAAGCCCAGGCCCCCT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGCTCAGGAGGGGGCCTaGGCTTTGGAGGGGCCCGCA +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVAQEGA*ALEGPA
Trigger: TGCGGGCCCCTCCAAAGCCCAGGCCCCCTCCTGAGC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGTCAAAGTGTGGTTCCTaGACTGGCAGCATCAGCATC +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRSKCGS*TGSISI
Trigger: GATGCTGATGCTGCCAGTCCAGGAACCACACTTTGA...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGAGCTCCCCTCTAAGTTaGGACTGCATAAAGGAACCC +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRSSPLS*DCIKEP
Trigger: GGGTTCCTTTATGCAGTCCCAACTTAGAGGGGAGCT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGATCCCAATAAACCTTTaGCACTTCTGCGAAGTTTTC +
Preference number: 4 (lower is better)
Translates to: QFLEERQRVATLLGLLRRIPINL*HFCEVF
Trigger: GAAAACTTCGCAGAAGTGCCAAAGGTTTATTGGGAT...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CAA 72 bp GTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTaGTTGGAAATGCAAATCATCAGGCTCCAGACCAAA +
Preference number: 4 (lower is better)
Translates to: VPGLAASASPGN*LEMQIIRLQTK
Trigger: TTTGGTCTGGAGCCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGCAATTTTATCAGCCGTaGAGCATATCTTTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKQFYQP*SISFLP
Trigger: TGGCAGAAAAGATATGCTTCACGGCTGATAAAATTG...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp AAGGGGATGAAAGTGGCGATTAGGGATTGCATACTGTGCGTGGGGAGCAGGAAGATATGTTTGACAGCCTaGGCTAGAGTGAACGTTTTG +
Preference number: 4 (lower is better)
Translates to: KGMKVAIRDCILCVGSRKICLTA*ARVNVL
Trigger: CAAAACGTTCACTCTAGCTCAGGCTGTCAAACATAT...CTTCCTGCTCCCCACGCACAGTATGCAATCCCTAATCGCCACTTTCATCCCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTGGTGGAATGTGCGCTTaGGATCAAACAGTACTGATG +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETGGMCA*DQTVLM
Trigger: CATCAGTACTGTTTGATCTCAAGCGCACATTCCACC...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGGAGACTGTGGCCGATaGGCAACTGCACTATTAAAA +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRGDCGR*ATALLK
Trigger: TTTTAATAGTGCAGTTGCTCATCGGCCACAGTCTCC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGTCTTCAGAACAAGGTTaGACTGAGCTAGATGAGATT +
Preference number: 4 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKSSEQG*TELDEI
Trigger: AATCTCATCTAGCTCAGTTCAACCTTGTTCTGAAGA...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTCCAGGACTCCGGGGATaGAAAGTTGAAAGAAGATTG +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETPGLRG*KVERRL
Trigger: CAATCTTCTTTCAACTTTTCATCCCCGGAGTCCTGG...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAGATCCTCAGGGGGTTTaGCAGTCTTGGGTGGCGCTA +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKDPQGV*QSWVAL
Trigger: TAGCGCCACCCAAGACTGTCAAACCCCCTGAGGATC...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCGCAGCACACTGTAGTTaGAGGAACTGGACACCTCGA +
Preference number: 4 (lower is better)
Translates to: YSAADLTRCAAVELERVVAAHCS*RNWTPR
Trigger: TCGAGGTGTCCAGTTCCTTCAACTACAGTGTGCTGC...GACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGAATCCTCTCCAAAGGTaGGCAAGCCTTTTCAGTAGG +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRNPLQR*ASLFSR
Trigger: CCTACTGAAAAGGCTTGCTCACCTTTGGAGAGGATT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTTCACCACACCAATACTaGCATCATCTAACTTCCCCC +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETSPHQY*HHLTSP
Trigger: GGGGGAAGTTAGATGATGGCAGTATTGGTGTGGTGA...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp TTCTGTTGCAAGTTAGCAAAAGTCCATGCTCCATCAGGTGCCAGGTATTTCAAGATGGGAGGGGGCTGCTaGTCCGGAATTACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FCCKLAKVHAPSGARYFKMGGGC*SGITAS
Trigger: AGAAGCTGTAATTCCGGAGCAGCAGCCCCCTCCCAT...CTTGAAATACCTGGCACCTGATGGAGCATGGACTTTTGCTAACTTGCAACAGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp TATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCAACCGTGCCTGCTGCTaGCTTAATGTTTCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: YSAADLTRCAAVELERVVNRACC*LNVSRA
Trigger: CGCTCTGGAAACATTAAGGCAGCAGCAGGCACGGTT...GACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp TATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCCCATGCTCCATCAGGTaGCAGGTATTTCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: YSAADLTRCAAVELERVVPCSIR*QVFQGR
Trigger: CCTCCCTTGAAATACCTGGCACCTGATGGAGCATGG...GACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGCTTTAGACGACCACTaGGGAACTGGGTTTGGTATT +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRALDDH*GTGFGI
Trigger: AATACCAAACCCAGTTCCGCAGTGGTCGTCTAAAGC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp GGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCTCTGCACACTTAAAGTAACTTaGATCCCAATAAACCTTTGG +
Preference number: 4 (lower is better)
Translates to: GVGGAVEMLGCWLLQCLCTLKVT*IPINLW
Trigger: CCAAAGGTTTATTGGGATGCAAGTTACTTTAAGTGT...GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTGCGTTCTATTTCCAATaGACAAGGCCCTGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETAFYFQ*TRPCEV
Trigger: GACTTCACAGGGCCTTGTCCATTGGAAATAGAACGC...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGACTTGGCAAGAATGGTaGATACAGGTTGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRTWQEW*IQVGAS
Trigger: GGAAGCTCCAACCTGTATCCACCATTCTTGCCAAGT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGATGCTGCAGCACACTGTACTGGACTACCTGATTTaGCTGAGGTGGTATCTGATT +
Preference number: 4 (lower is better)
Translates to: LLVRHKGWKLAKMLQHTVLDYLI*LRWYLI
Trigger: AATCAGATACCACCTCAGCCAAATCAGGTAGTCCAG...TACAGTGTGCTGCAGCATCTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATGCTCGCTCCACTGCTaGAACCGTGCCTGCTGCTGC +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPCSLHC*NRACCC
Trigger: GCAGCAGCAGGCACGGTTCCAGCAGTGGAGCGAGCA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCTACTGTGGTCTGTACTaGATGGGGGAGATGGGACTG +
Preference number: 4 (lower is better)
Translates to: YSAADLTRCAAVELERVVYCGLY*MGEMGL
Trigger: CAGTCCCATCTCCCCCATCCAGTACAGACCACAGTA...GACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp TTCTGTTGCAAGTTAGCAAAAGTCCATGCTCCATCAGGTGCCAGGTATTTCAAGGGTGAGTTGAATATCTaGGGTGGGAGGCGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: FCCKLAKVHAPSGARYFKGELNI*GGRRCG
Trigger: TCCACAGCGCCTCCCACCCCAGATATTCAACTCACC...CTTGAAATACCTGGCACCTGATGGAGCATGGACTTTTGCTAACTTGCAACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp AGTGATCATTCTGGGTATGATGAAGACTTTTCCCATGTCCACACTAAACAAGCTGGGGGCTACTGCTATTaGCCGACTCCGCGATCTGCT +
Preference number: 4 (lower is better)
Translates to: SDHSGYDEDFSHVHTKQAGGYCY*PTPRSA
Trigger: AGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCCCC...AGCTTGTTTAGTGTGGACATGGGAAAAGTCTTCATCATACCCAGAATGATCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTCAAAATCAGAAATGCTaGGGGTGGGTCCAGCTATCT +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETQNQKC*GWVQLS
Trigger: AGATAGCTGGACCCACCCCCAGCATTTCTGATTTTG...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAGTAATCCCAACACTTTaGGAGCCCGAGGCGGGCAGA +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKVIPTL*EPEAGR
Trigger: TCTGCCCGCCTCGGGCTCCCAAAGTGTTGGGATTAC...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGCTGCACTGACACTTTaGGACTTCAACCAGGACAAA +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRAALTL*DFNQDK
Trigger: TTTGTCCTGGTTGAAGTCCCAAAGTGTCAGTGCAGC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CAA 72 bp AATATCTGGGGTGGGAGGCGCTGTGGAAATGCTGGGTaGCTGGCTACTTCAATGTCTCTGCTGTTATCATTA +
Preference number: 4 (lower is better)
Translates to: NIWGGRRCGNAG*LATSMSLLLSL
Trigger: TAATGATAACAGCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCCAGATATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCTTGGTATGGTGGGAGTCATACTaGTGTCTGGAAACAAAACCC +
Preference number: 4 (lower is better)
Translates to: AADLTRCAAVELERVVLVWWESY*CLETKP
Trigger: GGGTTTTGTTTCCAGACATCAGTATGACTCCCACCA...TACCAAGACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTACAATCCGAGTGTTTTaGGTTGCTAATGCTAGAGGC +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETTIRVF*VANARG
Trigger: GCCTCTAGCATTAGCAACTCAAAACACTCGGATTGT...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTACAGAAGGATTGGGCTaGACAATTCCATCATTCTGG +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETTEGLG*TIPSFW
Trigger: CCAGAATGATGGAATTGTTCAGCCCAATCCTTCTGT...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGAACAACACTAGGACGTaGTTCAGGACTTCTGTTCTG +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRNNTRT*FRTSVL
Trigger: CAGAACAGAAGTCCTGAATCACGTCCTAGTGTTGTT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTCTTCGGCACTGCTGGTaGGCTTCCAGTCTGCCCTCA +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTLRHCW*ASSLPS
Trigger: TGAGGGCAGACTGGAAGCTCACCAGCAGTGCCGAAG...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGTGCAAAAGTCTTGATTaGGGTGGTGGCATTTCAGCT +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRCKSLD*GGGISA
Trigger: AGCTGAAATGCCACCACCTCAATCAAGACTTTTGCA...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATTCTGCGGTGGCCTGTaGGGCAATGGAGGTAGGCCA +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPFCGGL*GNGGRP
Trigger: TGGCCTACCTCCATTGCCTCACAGGCCACCGCAGAA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCTTCTCCGACTTCAGTTaGTCCTCAGGGGGTTTGACA +
Preference number: 4 (lower is better)
Translates to: YSAADLTRCAAVELERVVFSDFS*SSGGLT
Trigger: TGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAA...GACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGACTCTCATGGCATTCTaGTGGCTTCTTTCCAGGATT +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRTLMAF*WLLSRI
Trigger: AATCCTGGAAAGAAGCCATCAGAATGCCATGAGAGT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp TTCTGTTGCAAGTTAGCAAAAGTCCATGCTCCATCAGGTGCCAGGTATTTCAAGAGCTTCCCTTTCAGCTaGATGCAGCAAAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: FCCKLAKVHAPSGARYFKSFPFS*MQQSTA
Trigger: GGCAGTGCTTTGCTGCATGCAGCTGAAAGGGAAGCT...CTTGAAATACCTGGCACCTGATGGAGCATGGACTTTTGCTAACTTGCAACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGACGATACAGCATTCTTaGAGGCTTACAAGTGAGAGC +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRTIQHS*RLTSES
Trigger: GCTCTCACTTGTAAGCCTGCAAGAATGCTGTATCGT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGATCTTCTGTAGAAGCTaGATCAATCATTACTCTTTG +
Preference number: 4 (lower is better)
Translates to: QFLEERQRVATLLGLLRRIFCRS*INHYSL
Trigger: CAAAGAGTAATGATTGATGCAGCTTCTACAGAAGAT...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp TATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCGTAGAAATCTTTGTGTaGTGGCTGCTTCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: YSAADLTRCAAVELERVVVEIFV*WLLPTG
Trigger: GCCAGTGGGAAGCAGCCAGCACACAAAGATTTCTAC...GACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGAGCAACCAGGGATTGTaGTCTTGTGATGGCAGTATT +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRSNQGL*SCDGSI
Trigger: AATACTGCCATCACAAGAGCACAATCCCTGGTTGCT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTGGGGATAAATTCAGGTaGCAGCGGATTCAACACATA +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETGDKFR*QRIQHI
Trigger: TATGTGTTGAATCCGCTGGCACCTGAATTTATCCCC...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAACGGAATTACAGCTTCTaGAGGAGGAGACTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKRNYSF*RRRLWP
Trigger: CGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCG...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp AATACTTGTCCCAGTGTGAGGATCTATTCTTTGAACAGGGCTTGGAGATTTTCCCGGAATTACAGCTTCTaGAGGAGGAGACTGTGGCCG +
Preference number: 4 (lower is better)
Translates to: NTCPSVRIYSLNRAWRFSRNYSF*RRRLWP
Trigger: CGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCG...GGAAAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCACACTGGGACAAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGGTGAGCTTCCAGTCTaGCCTCACTGGCGGCTGATG +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTGELPV*PHWRLM
Trigger: CATCAGCCGCCAGTGAGGGCAGACTGGAAGCTCACC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp AATACTTGTCCCAGTGTGAGGATCTATTCTTTGAACAGGGCTTGGAGATTTTCCTGGGCTGAGCTGTCCTaGTGGATCCATTGCACGGAA +
Preference number: 4 (lower is better)
Translates to: NTCPSVRIYSLNRAWRFSWAELS*WIHCTE
Trigger: TTCCGTGCAATGGATCCAGCAGGACAGCTCAGCCCA...GGAAAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCACACTGGGACAAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAGCTCTGGGGGCTACTaGTATTGGCCGACTCCGCGA +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPSSGGY*YWPTPR
Trigger: TCGCGGAGTCGGCCAATAGCAGTAGCCCCCAGAGCT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTTTACAAGTCTATGTCTaGCACCTTACACAGAGACCC +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETLQVYV*HLTQRP
Trigger: GGGTCTCTGTGTAAGGTGGCAGACATAGACTTGTAA...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGAGCACACCAAACAAATaGACAGCTTCCAGACTGATG +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRSTPNK*TASRLM
Trigger: CATCAGTCTGGAAGCTGTGCATTTGTTTGGTGTGCT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp AAGGGGATGAAAGTGGCGATTAGGGATTGCATACTGTGCGTGGGGAGCAGGAAGTCTTTGCATGAGTACTaGTTCCAATCCAAAGTCGAA +
Preference number: 4 (lower is better)
Translates to: KGMKVAIRDCILCVGSRKSLHEY*FQSKVE
Trigger: TTCGACTTTGGATTGGAACCAGTACTCATGCAAAGA...CTTCCTGCTCCCCACGCACAGTATGCAATCCCTAATCGCCACTTTCATCCCCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGCAGAGAGGGGAATTTaGTATCTGATAAGAAGGCTC +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRAERGI*YLIRRL
Trigger: GAGCCTTCTTATCAGATACCAAATTCCCCTCTCTGC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGTCTAAAGCCTCTAACTaGGCTTTGATCTGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKSKASN*ALICSK
Trigger: TTTTGAACAGATCAAAGCCCAGTTAGAGGCTTTAGA...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCTTGGTAAGGTCCAAGAGGGGGTaGAGGAGTATATGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: AADLTRCAAVELERVVLVRSKRG*RSICSN
Trigger: ATTAGAGCATATACTCCTCCACCCCCTCTTGGACCT...TACCAAGACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAATGCAGGAGGAGACTGTaGCCGATGAGCAACTGCACT +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKCRRRL*PMSNCT
Trigger: AGTGCAGTTGCTCATCGGCCACAGTCTCCTCCTGCA...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp AATACTTGTCCCAGTGTGAGGATCTATTCTTTGAACAGGGCTTGGAGATTTTCCTGCAGGAGGAGACTGTaGCCGATGAGCAACTGCACT +
Preference number: 4 (lower is better)
Translates to: NTCPSVRIYSLNRAWRFSCRRRL*PMSNCT
Trigger: AGTGCAGTTGCTCATCGGCCACAGTCTCCTCCTGCA...GGAAAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCACACTGGGACAAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp AATACTTGTCCCAGTGTGAGGATCTATTCTTTGAACAGGGCTTGGAGATTTTCCGCTCTCAGAGGACTGTaGCCTTCTTGCAGCATGGGA +
Preference number: 4 (lower is better)
Translates to: NTCPSVRIYSLNRAWRFSALRGL*PSCSMG
Trigger: TCCCATGCTGCAAGAAGGCCACAGTCCTCTGAGAGC...GGAAAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCACACTGGGACAAGTATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTGAAACCTTGAGTATGTaGTCTCCACTTCATCTTCGG +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETETLSM*SPLHLR
Trigger: CCGAAGATGAAGTGGAGACCACATACTCAAGGTTTC...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAGGTGAGTTGAATATCTaGGGTGGGAGGCGCTGTGGA +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKGELNI*GGRRCG
Trigger: TCCACAGCGCCTCCCACCCCAGATATTCAACTCACC...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GGTCCTGAAGCTCTTTACACTGAGCCAGACTGTCTTGAGGAGTGCTTACTTCTTGATGAGATTCTTCTTTaGTACAAGGGCCGACCAGGT +
Preference number: 4 (lower is better)
Translates to: GPEALYTEPDCLEECLLLDEILL*YKGRPG
Trigger: ACCTGGTCGGCCCTTGTACCAAAGAAGAATCTCATC...AAGAAGTAAGCACTCCTCAAGACAGTCTGGCTCAGTGTAAAGAGCTTCAGGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GCAAATTATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGCCTAGGCTCAGTTCCTaGAAGAGAGACAGAGGGTCG +
Preference number: 4 (lower is better)
Translates to: ANYSAADLTRCAAVELERPRLSS*KRDRGS
Trigger: CGACCCTCTGTCTCTCTTCCAGGAACTGAGCCTAGG...CCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATAATTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTCTAGGTGCACTCTCATaGCATTCTGATGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETLGALS*HSDGFF
Trigger: AAAGAAGCCATCAGAATGCCATGAGAGTGCACCTAG...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGACATGCTTGTTCACATaGCTTTTCAGCTCTTCTGTC +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRTCLFT*LFSSSV
Trigger: GACAGAAGAGCTGAAAAGTCATGTGAACAAGCATGT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAGGTGCTGACAGTAACTaGCAGGTCAGGATTGTGCTC +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKGADSN*QVRIVL
Trigger: GAGCACAATCCTGACCTGTCAGTTACTGTCAGCACC...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCGGTGGAATGTGCGCTTaGGATCAAACAGTACTGATG +
Preference number: 4 (lower is better)
Translates to: YSAADLTRCAAVELERVVGGMCA*DQTVLM
Trigger: CATCAGTACTGTTTGATCTCAAGCGCACATTCCACC...GACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAATTTCCCAAATTTGGGTaGGGTCCAAGAGGGGGTGGA +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKFPKFG*GPRGGG
Trigger: TCCACCCCCTCTTGGACCTCACCCAAATTTGGGAAA...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGAGGGGTTCTCATCAATaGAGCTATTCAGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRRGSHQ*SYSDVK
Trigger: CTTCACATCTGAATAGCTTCATTGATGAGAACCCCT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTAGCAGATGGGAAATGTaGGGAGCATATCATAATGAG +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETSRWEM*GAYHNE
Trigger: CTCATTATGATATGCTCCTCACATTTCCCATCTGCT...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGAGGCGGGCAGATCATaGGGTCAAGAGATGGAGACC +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPEAGRS*GQEMET
Trigger: GGTCTCCATCTCTTGACCTCATGATCTGCCCGCCTC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp GCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCTTGGTAAGTGAGCATGAAGCTTaGCAGAATCTGCAATTGCAC +
Preference number: 4 (lower is better)
Translates to: AADLTRCAAVELERVVLVSEHEA*QNLQLH
Trigger: GTGCAATTGCAGATTCTGGCAAGCTTCATGCTCACT...TACCAAGACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGATTCTGAGCATACTTTaGACCTCCAGAAACACCAGT +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRILSIL*TSRNTS
Trigger: ACTGGTGTTTCTGGAGGTGCAAAGTATGCTCAGAAT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAGCATGGGAGGGGGCTaGTGCTCCGGAATTACAGCT +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPSMGGG*CSGITA
Trigger: AGCTGTAATTCCGGAGCAGCAGCCCCCTCCCATGCT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGGACTGTGGCCTTCTTaGAGCATGGGAGGGGGCTGC +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVGLWPS*SMGGGC
Trigger: GCAGCCCCCTCCCATGCTGCAAGAAGGCCACAGTCC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATGGGGGAGATGGGACTaGTGGTGGGCTTCTACTCTG +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPWGRWD*WWASTL
Trigger: CAGAGTAGAAGCCCACCAGCAGTCCCATCTCCCCCA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGACTGTCTTGAGGAGTaGTTACTTCTTCAGAACAAG +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRDCLEE*LLLQNK
Trigger: CTTGTTCTGAAGAAGTAAGCACTCCTCAAGACAGTC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTGCAACCTATGTAATTTaGCACCCTTTCCCCTTTACT +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETATYVI*HPFPFT
Trigger: AGTAAAGGGGAAAGGGTGGCAAATTACATAGGTTGC...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAACTGAGAGGTCTTGCCTaGGGATTGCCTGCTTCTACA +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKLRGLA*GLPAST
Trigger: TGTAGAAGCAGGCAATCCCCAGGCAAGACCTCTCAG...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGCTGTTTTGGTTCTGTTaGCTTTTTCTCTGGTGTTCG +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRLFWFC*LFLWCS
Trigger: CGAACACCAGAGAAAAAGCCAACAGAACCAAAACAG...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGAATTCTTTATACCACTaGAGAAGAGGGAAGCCAGGT +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRNSLYH*RRGKPG
Trigger: ACCTGGCTTCCCTCTTCTCCAGTGGTATAAAGAATT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGTGTGGTTCCTGGACTaGCAGCATCAGCATCGCCTG +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTVWFLD*QHQHRL
Trigger: CAGGCGATGCTGATGCTGCCAGTCCAGGAACCACAC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTGAAGCAGGCATGGTCTaGATTTATGAAAATCCAGGA +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETEAGMV*IYENPG
Trigger: TCCTGGATTTTCATAAATCCAGACCATGCCTGCTTC...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CAA 72 bp CTGAATACAAGAGGCACGCAGCGCTTATCCTGGAGCTaGCTAACCATTAACCAAAGGCACTCTTTTATCCCA +
Preference number: 4 (lower is better)
Translates to: LNTRGTQRLSWS*LTINQRHSFIP
Trigger: TGGGATAAAAGAGTGCCTTTGGTTAATGGTTAGCAAGCTCCAGGATAAGCGCTGCGTGCCTCTTGTATTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CAA 72 bp CTATTCTTTGAACAGGGCTTGGAGATTTTCCCAAATTaGGGTGAGGTCCAAGAGGGGGTGGAGGAGTATATG +
Preference number: 4 (lower is better)
Translates to: LFFEQGLEIFPN*GEVQEGVEEYM
Trigger: CATATACTCCTCCACCCCCTCTTGGACCTCACCCAAATTTGGGAAAATCTCCAAGCCCTGTTCAAAGAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CAA 72 bp GCTGATTCAACTGACTTTGCTGCTGGACTACCTGATTaGGCTGAGGTGGTATCTGATTTGGTTGTTCAGGCA +
Preference number: 4 (lower is better)
Translates to: ADSTDFAAGLPD*AEVVSDLVVQA
Trigger: TGCCTGAACAACCAAATCAGATACCACCTCAGCCAAATCAGGTAGTCCAGCAGCAAAGTCAGTTGAATCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CAA 72 bp GTGGTCCTGAAGCTCTTTACACTGAGCCAGACTGTCTaGAGGAGTGCTTACTTCTTCAGAACAAGGTTGAAC +
Preference number: 4 (lower is better)
Translates to: VVLKLFTLSQTV*RSAYFFRTRLN
Trigger: GTTCAACCTTGTTCTGAAGAAGTAAGCACTCCTCAAGACAGTCTGGCTCAGTGTAAAGAGCTTCAGGACCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTCAATTTTATCAGCCGTaGAGCATATCTTTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETQFYQP*SISFLP
Trigger: TGGCAGAAAAGATATGCTTCACGGCTGATAAAATTG...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGTTCCATGTAACTGCCTaGGAGCTGTTTATTCTCATT +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRFHVTA*ELFILI
Trigger: AATGAGAATAAACAGCTCTCAGGCAGTTACATGGAA...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTCTGAATTGCTTTCCTTaGACATTTAGCACCCTTTCT +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETLNCFP*TFSTLS
Trigger: AGAAAGGGTGCTAAATGTTCAAGGAAAGCAATTCAG...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGAGCGCTGCCCTGACTaGGAAAGGCATGATGCTCGC +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVERCPD*ERHDAR
Trigger: GCGAGCATCATGCCTTTCTCAGTCAGGGCAGCGCTC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR TCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTGATGGAAACTTGCAATaGTTCTTACACAAGACGTGT +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETDGNLQ*FLHKTC
Trigger: ACACGTCTTGTGTAAGAATCATTGCAAGTTTCCATC...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTAGGCCCTGTGAAGTCTaGCATGGAGTACTGGCCAAG +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTRPCEV*HGVLAK
Trigger: CTTGGCCAGTACTCCATGGCAGACTTCACAGGGCCT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGGTGGTGGGCGGAAATaGCAACCATTACAAGACCCC +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPGGGRK*QPLQDP
Trigger: GGGGTCTTGTAATGGTTGGCATTTCCGCCCACCACC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATACCCTGAGAGGTCTTaGCTGGGGATTGCCTGCTTC +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPYPERS*LGIACF
Trigger: GAAGCAGGCAATCCCCAGGCAAGACCTCTCAGGGTA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAGTAGAAATCTTTGTGTaGTGGCTGCTTCCCACTGGC +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKVEIFV*WLLPTG
Trigger: GCCAGTGGGAAGCAGCCAGCACACAAAGATTTCTAC...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGTACTTCCTGAATGCTaGAGTCTTAGAGCCCGGGGG +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTVLPEC*SLRARG
Trigger: CCCCCGGGCTCTAAGACTGCAGCATTCAGGAAGTAC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAATTGGTACTTCCTGAATaGTGCAGTCTTAGAGCCCGG +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKLVLPE*CSLRAR
Trigger: CCGGGCTCTAAGACTGCAGCATTCAGGAAGTACCAA...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGTGGCGATTAGGGATTaGATACTGTGCGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPVAIRD*ILCVGS
Trigger: GCTCCCCACGCACAGTATGCAATCCCTAATCGCCAC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp GCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCTTGGTATTTAACAAGGTGTGCTaGTGTGGAATTGGAAAGGGT +
Preference number: 4 (lower is better)
Translates to: AADLTRCAAVELERVVLVFNKVC*CGIGKG
Trigger: ACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAA...TACCAAGACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTAATGGGGCCGGGTTGTaGAATGGCTCTCAGAGGACT +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTNGAGL*NGSQRT
Trigger: AGTCCTCTGAGAGCCATTGCACAACCCGGCCCCATT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATGGGCTGAGCTGTCCTaGTGGATCCATTGCACGGAA +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPWAELS*WIHCTE
Trigger: TTCCGTGCAATGGATCCAGCAGGACAGCTCAGCCCA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAGATGCTCCATGTCACTaGCATCTTAGGACAGGGACT +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKDAPCH*HLRTGT
Trigger: AGTCCCTGTCCTAAGATGGCAGTGACATGGAGCATC...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAACCTCTAAGTTGGGACTaGATAAAGGAACCCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKPLSWD*IKEPRL
Trigger: CAGCCTGGGTTCCTTTATGCAGTCCCAACTTAGAGG...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp GCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCTTGGTACTGCTAGTCTCCTGTTaGTGCAGAATATGTTTGACA +
Preference number: 4 (lower is better)
Translates to: AADLTRCAAVELERVVLVLLVSC*CRICLT
Trigger: TGTCAAACATATTCTGCAGCAACAGGAGACTAGCAG...TACCAAGACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp TTCTGTTGCAAGTTAGCAAAAGTCCATGCTCCATCAGGTGCCAGGTATTTCAAGACTTGGCAAGAATGGTaGATACAGGTTGGAGCTTCC +
Preference number: 4 (lower is better)
Translates to: FCCKLAKVHAPSGARYFKTWQEW*IQVGAS
Trigger: GGAAGCTCCAACCTGTATCCACCATTCTTGCCAAGT...CTTGAAATACCTGGCACCTGATGGAGCATGGACTTTTGCTAACTTGCAACAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTTGTGATTCCCCTAGGTaGTGGGCGGAAATGCCAACC +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTCDSPR*WAEMPT
Trigger: GGTTGGCATTTCCGCCCACCACCTAGGGGAATCACA...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCTGTGCTGAAGTACACTaGGCACCATACCTACAGATT +
Preference number: 4 (lower is better)
Translates to: YSAADLTRCAAVELERVVCAEVH*APYLQI
Trigger: AATCTGTAGGTATGGTGCCCAGTGTACTTCAGCACA...GACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAGCACAGGCGGCAGCTaGATTGCAAGTGGAGTGGTA +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPSTGGS*IASGVV
Trigger: TACCACTCCACTTGCAATCCAGCTGCCGCCTGTGCT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAATGGTTTCACACTCCATaGCCTGGGCAGCTTCATCTA +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKWFHTP*PGQLHL
Trigger: TAGATGAAGCTGCCCAGGCCATGGAGTGTGAAACCA...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp AATACTTGTCCCAGTGTGAGGATCTATTCTTTGAACAGGGCTTGGAGATTTTCCTGGTTTCACACTCCATaGCCTGGGCAGCTTCATCTA +
Preference number: 4 (lower is better)
Translates to: NTCPSVRIYSLNRAWRFSWFHTP*PGQLHL
Trigger: TAGATGAAGCTGCCCAGGCCATGGAGTGTGAAACCA...GGAAAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCACACTGGGACAAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTCTGGCTGCTTCCCACTaGCCATCAGTTTGCCCTCAT +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTLAASH*PSVCPH
Trigger: ATGAGGGCAAACTGATGGCCAGTGGGAAGCAGCCAG...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAGAAATCTTTGTGTGCTaGCTGCTTCCCACTGGCCAT +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKEIFVC*LLPTGH
Trigger: ATGGCCAGTGGGAAGCAGCCAGCACACAAAGATTTC...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp ATATCTGGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTAGGTGGTATCTGATTTaGTTGTTCAGGCAAATTATT +
Preference number: 4 (lower is better)
Translates to: ISGVGGAVEMLGCWLLQCRWYLI*LFRQII
Trigger: AATAATTTGCCTGAACAACCAAATCAGATACCACCT...ACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCCAGATAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAAAAGGGTTCTGCGGTaGCCTGTGAGGCAATGGAGG +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPKRVLR*PVRQWR
Trigger: CCTCCATTGCCTCACAGGCCACCGCAGAACCCTTTT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CAA 72 bp TTGTCCCAGTGTGAGGATCTATTCTTTGAACAGGGCTaGGAGATTTTCCCAAATTTGGGTGAGGTCCAAGAG +
Preference number: 4 (lower is better)
Translates to: LSQCEDLFFEQG*EIFPNLGEVQE
Trigger: CTCTTGGACCTCACCCAAATTTGGGAAAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCACACTGGGACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GGTCCTGAAGCTCTTTACACTGAGCCAGACTGTCTTGAGGAGTGCTTACTTCTTGAAGACTCTCGATTTTaGTGCGTTCTATTTCCAATG +
Preference number: 4 (lower is better)
Translates to: GPEALYTEPDCLEECLLLEDSRF*CVLFPM
Trigger: CATTGGAAATAGAACGCATCAAAATCGAGAGTCTTC...AAGAAGTAAGCACTCCTCAAGACAGTCTGGCTCAGTGTAAAGAGCTTCAGGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATCAGGGACTCTCCTGTaGGTGACTTGGCAAGAATGG +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPSGTLL*VTWQEW
Trigger: CCATTCTTGCCAAGTCACTCACAGGAGAGTCCCTGA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp AATACTTGTCCCAGTGTGAGGATCTATTCTTTGAACAGGGCTTGGAGATTTTCCGAGATCAAACAGTACTaGTGCACAACTGGGTGGACA +
Preference number: 4 (lower is better)
Translates to: NTCPSVRIYSLNRAWRFSEIKQY*CTTGWT
Trigger: TGTCCACCCAGTTGTGCATCAGTACTGTTTGATCTC...GGAAAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCACACTGGGACAAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp AGTGATCATTCTGGGTATGATGAAGACTTTTCCCATGTCCACACTAAACAAGCTTCTTTCTGGGGCATCTaGAAGGTGGAATGTGCGCTT +
Preference number: 4 (lower is better)
Translates to: SDHSGYDEDFSHVHTKQASFWGI*KVECAL
Trigger: AAGCGCACATTCCACCTTTCAGATGCCCCAGAAAGA...AGCTTGTTTAGTGTGGACATGGGAAAAGTCTTCATCATACCCAGAATGATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp AGTGATCATTCTGGGTATGATGAAGACTTTTCCCATGTCCACACTAAACAAGCTGGTTCAAGGTCCAACTaGCAGAGGTACTGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: SDHSGYDEDFSHVHTKQAGSRSN*QRYWEV
Trigger: TACTTCCCAGTACCTCTGTCAGTTGGACCTTGAACC...AGCTTGTTTAGTGTGGACATGGGAAAAGTCTTCATCATACCCAGAATGATCACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp TATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCCGTATTCTAAACACTTaGTCAGCATATGGAGTCACC +
Preference number: 4 (lower is better)
Translates to: YSAADLTRCAAVELERVVRILNT*SAYGVT
Trigger: GGTGACTCCATATGCTGATCAAGTGTTTAGAATACG...GACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp TTCTGTTGCAAGTTAGCAAAAGTCCATGCTCCATCAGGTGCCAGGTATTTCAAGAGGCTACTGTTTTCATaGCACAGGGCAATAAACCGT +
Preference number: 4 (lower is better)
Translates to: FCCKLAKVHAPSGARYFKRLLFS*HRAINR
Trigger: ACGGTTTATTGCCCTGTGTCATGAAAACAGTAGCCT...CTTGAAATACCTGGCACCTGATGGAGCATGGACTTTTGCTAACTTGCAACAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGCTGTGCATCTATAGATaGAGTCCAACTACCTTAATT +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRLCIYR*SPTTLI
Trigger: AATTAAGGTAGTTGGACTTCATCTATAGATGCACAG...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTCCAAAAACCTGTTTTTaGATGGATCATCAGGAAGAT +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETPKTCF*MDHQED
Trigger: ATCTTCCTGATGATCCATTCAAAAACAGGTTTTTGG...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTTCAGTTTTCCAGCTGTaGTTTATGCTAACCATTAAC +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETSVFQL*FMLTIN
Trigger: GTTAATGGTTAGCATAAATCACAGCTGGAAAACTGA...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGTAAATAGTACTATGTaGCTTCTACTCTGTGTTGCA +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRVNSTM*LLLCVA
Trigger: TGCAACACAGAGTAGAAGTCACATAGTACTATTTAC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCACATGCAGCAAAGCACTaGCCGAAAGGCATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPHAAKH*PKGIFS
Trigger: GGAGAAGATGCCTTTCGGGCAGTGCTTTGCTGCATG...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAGCTTCCCTTTCAGCTaGATGCAGCAAAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPSFPFS*MQQSTA
Trigger: GGCAGTGCTTTGCTGCATGCAGCTGAAAGGGAAGCT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp TATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCATTCTGAGCATACTTTaGACCTCCAGAAACACCAGT +
Preference number: 4 (lower is better)
Translates to: YSAADLTRCAAVELERVVILSIL*TSRNTS
Trigger: ACTGGTGTTTCTGGAGGTGCAAAGTATGCTCAGAAT...GACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp AATACTTGTCCCAGTGTGAGGATCTATTCTTTGAACAGGGCTTGGAGATTTTCCGTCTTGCCTGGGGATTaGCTGCTTCTACATATGGAT +
Preference number: 4 (lower is better)
Translates to: NTCPSVRIYSLNRAWRFSVLPGD*LLLHMD
Trigger: ATCCATATGTAGAAGCAGGCAATCCCCAGGCAAGAC...GGAAAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCACACTGGGACAAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTTGCTGGAACCGTGCCTaGTGCTGCCTTAATGTTTCC +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTCWNRA*CCLNVS
Trigger: GGAAACATTAAGGCAGCAGCAGGCACGGTTCCAGCA...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTCCATGCTCCATCAGGTaGCAGGTATTTCAAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTPCSIR*QVFQGR
Trigger: CCTCCCTTGAAATACCTGGCACCTGATGGAGCATGG...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAGTTAGCAAAAGTCCATaGTCCATCAGGTGCCAGGTA +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKVSKSP*SIRCQV
Trigger: TACCTGGCACCTGATGGAGCATGGACTTTTGCTAAC...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGCTCCTTCACCCTACTaGGGAAGAGCAGTGCAGACC +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVAPSPY*GRAVQT
Trigger: GGTCTGCACTGCTCTTCCGCAGTAGGGTGAAGGAGC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGCTTATGAATAATTCATaGTGTGTAGGTGGTAGATCC +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRLMNNS*CVGGRS
Trigger: GGATCTACCACCTACACAGCATGAATTATTCATAAG...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAACTTTCTACGCCATCTTaGATCCACTTGTCAACGTCC +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKLSTPS*IHLSTS
Trigger: GGACGTTGACAAGTGGATCCAAGATGGCGTAGAAAG...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATCTGCCATGGAGTACTaGCCAAGAGAAAGAAGGGCC +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPSAMEY*PRERRA
Trigger: GGCCCTTCTTTCTCTTGGCCAGTACTCCATGGCAGA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp AATACTTGTCCCAGTGTGAGGATCTATTCTTTGAACAGGGCTTGGAGATTTTCCGCGTTCTATTTCCAATaGACAAGGCCCTGTGAAGTC +
Preference number: 4 (lower is better)
Translates to: NTCPSVRIYSLNRAWRFSAFYFQ*TRPCEV
Trigger: GACTTCACAGGGCCTTGTCCATTGGAAATAGAACGC...GGAAAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCACACTGGGACAAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGATTCCCCTAGGTGGTaGGCGGAAATGCCAACCATT +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPDSPRW*AEMPTI
Trigger: AATGGTTGGCATTTCCGCCCACCACCTAGGGGAATC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTCAAAGTCGAAAACTATaGTTTGGCGAAAAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETQSRKL*FGEKFQ
Trigger: TTGGAACTTTTCGCCAAACCATAGTTTTCGACTTTG...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GCAAATTATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGCAGGAGAATCCTACATaGGAACTCAGCAGGGTAATG +
Preference number: 4 (lower is better)
Translates to: ANYSAADLTRCAAVELERQENPT*ELSRVM
Trigger: CATTACCCTGCTGAGTTCCCATGTAGGATTCTCCTG...CCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATAATTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAACTGCAAACCTACCCTaGTATCCTGTCCATGGTACA +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKTANLP*YPVHGT
Trigger: TGTACCATGGACAGGATACCAGGGTAGGTTTGCAGT...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp AATACTTGTCCCAGTGTGAGGATCTATTCTTTGAACAGGGCTTGGAGATTTTCCACTGCAAACCTACCCTaGTATCCTGTCCATGGTACA +
Preference number: 4 (lower is better)
Translates to: NTCPSVRIYSLNRAWRFSTANLP*YPVHGT
Trigger: TGTACCATGGACAGGATACCAGGGTAGGTTTGCAGT...GGAAAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCACACTGGGACAAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGCCTATGGTGACAGGTaGGTGATGTCCAAGGCCATA +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPAYGDR*VMSKAI
Trigger: TATGGCCTTGGACATCACCCACCTGTCACCATAGGC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGTGATGGTGTGGGTATaGAGCGCTGCCCTGACTGAG +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVVMVWV*SAALTE
Trigger: CTCAGTCAGGGCAGCGCTCCATACCCACACCATCAC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAACTGGATGGGGGAGATaGGACTGCTGGTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVTGWGR*DCWWAS
Trigger: AGAAGCCCACCAGCAGTCCCATCTCCCCCATCCAGT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTTTAAAGTTAGAAAAGTaGCTACTGTGGTCTGTACTG +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETLKLEK*LLWSVL
Trigger: CAGTACAGACCACAGTAGCCACTTTTCTAACTTTAA...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGCGCTATCAACTCTCTaGGCTGAGCTGTCCTGCTGG +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVALSTL*AELSCW
Trigger: CCAGCAGGACAGCTCAGCCCAGAGAGTTGATAGCGC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTATTGCCTATCGAAAGTaGTCTTCCAAAAACCTGTTT +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETIAYRK*SSKNLF
Trigger: AAACAGGTTTTTGGAAGACCACTTTCGATAGGCAAT...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGTCTTTGTAAGTGATTaGCACCACTACGTGATATTT +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRVFVSD*HHYVIF
Trigger: AAATATCACGTAGTGGTGCCAATCACTTACAAAGAC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CAA 72 bp CATTCCCTCCATAGACAGCAGGTACATAAAGAATACTaGTCCCAGTGTGAGGATCTATTCTTTGAACAGGGC +
Preference number: 4 (lower is better)
Translates to: HSLHRQQVHKEY*SQCEDLFFEQG
Trigger: GCCCTGTTCAAAGAATAGATCCTCACACTGGGACAAGTATTCTTTATGTACCTGCTGTCTATGGAGGGAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
3UTR CAA 72 bp GGCTTCTACTCTGTACTTGTCTATATTGCAAAAGTCTaGATTGAGGTGGTGGCATTTCAGCTAGTTCCCGTG +
Preference number: 4 (lower is better)
Translates to: GFYSVLVYIAKV*IEVVAFQLVPV
Trigger: CACGGGAACTAGCTGAAATGCCACCACCTCAATCAAGACTTTTGCAATATAGACAAGTACAGAGTAGAAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGGTTCAAGGTCCAACTaGCAGAGGTACTGGGAAGTA +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTGSRSN*QRYWEV
Trigger: TACTTCCCAGTACCTCTGTCAGTTGGACCTTGAACC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TGGGTGAAATGGCTCTTGACCAATAGCATGTTGATGATTCTGTATTTGTACAAAAGCTGGGGAAGGGGATaGAAGTGGCGATTAGGGATT +
Preference number: 4 (lower is better)
Translates to: WVKWLLTNSMLMILYLYKSWGRG*KWRLGI
Trigger: AATCCCTAATCGCCACTTTCATCCCCTTCCCCAGCT...TTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGAGCCATTTCACCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTTTCTCCGACTTCAGTTaGTCCTCAGGGGGTTTGACA +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTFSDFS*SSGGLT
Trigger: TGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAA...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAGTGGGTCCAGCTATCTaGATTTTAACAAGACCTCGA +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKVGPAI*ILTRPR
Trigger: TCGAGGTCTTGTTAAAATTCAGATAGCTGGACCCAC...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAGAGAATCAGACCCAGTaGTTTTCAAAGTGTGGTTCC +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKENQTQ*FSKCGS
Trigger: GGAACCACACTTTGAAAATCACTGGGTCTGATTCTC...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAATGGGAGGGGGCTGCTaGTCCGGAATTACAGCTTCT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVMGGGC*SGITAS
Trigger: AGAAGCTGTAATTCCGGAGCAGCAGCCCCCTCCCAT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR GCA 90 bp TGGGTGAAATGGCTCTTGACCAATAGCATGTTGATGATTCTGTATTTGTACAAATGCTGGAACCGTGCCTaGTGCTGCCTTAATGTTTCC +
Preference number: 4 (lower is better)
Translates to: WVKWLLTNSMLMILYLYKCWNRA*CCLNVS
Trigger: GGAAACATTAAGGCAGCAGCAGGCACGGTTCCAGCA...TTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGAGCCATTTCACCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAACAGAGAAAGAGTGGTaGTGTAACTTGCCGGCTCAG +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPTEKEW*CNLPAQ
Trigger: CTGAGCCGGCAAGTTACAGCACCACTCTTTCTCTGT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGACCAAAATCAGAAATaGTGGGGGTGGGTCCAGCTA +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPDQNQK*WGWVQL
Trigger: TAGCTGGACCCACCCCCAGCATTTCTGATTTTGGTC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCACAGCTGGATTGCAAGTaGAGTGGTAATGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPQLDCK*SGNGQN
Trigger: GTTCTGGCCATTACCACTCCACTTGCAATCCAGCTG...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAAGCACAGGCGGCAGCTaGATTGCAAGTGGAGTGGTA +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVSTGGS*IASGVV
Trigger: TACCACTCCACTTGCAATCCAGCTGCCGCCTGTGCT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTAAGATTTATGTGTCTTaGGTTGAGATTATCTTTGCG +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETKIYVS*VEIIFA
Trigger: CGCAAAGATAATCTCAACCCAAGACACATAAATCTT...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAACTGGACTACCTGATTTaGCTGAGGTGGTATCTGATT +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKLDYLI*LRWYLI
Trigger: AATCAGATACCACCTCAGCCAAATCAGGTAGTCCAG...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGAAAAGTGGCTACTGTaGTCTGTACTGGATGGGGGA +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPEKWLL*SVLDGG
Trigger: TCCCCCATCCAGTACAGACCACAGTAGCCACTTTTC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGTTTAACTCTATCCTATaGTGGATGGAGATTACAACA +
Preference number: 4 (lower is better)
Translates to: GLAASASPGNLLEMQIIRFNSIL*WMEITT
Trigger: TGTTGTAATCTCCATCCACCATAGGATAGAGTTAAA...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTACAGAGACCCACAGCCTaGAACGCAAAGCCACACACA +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVQRPTA*NAKPHT
Trigger: TGTGTGTGGCTTTGCGTTCCAGGCTGTGGGTCTCTG...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTTCTGCTATAACAATTTaGCAAAGCATATGCCCAAAT +
Preference number: 4 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETSAITI*QSICPN
Trigger: ATTTGGGCATATGCTTTGCCAAATTGTTATAGCAGA...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAACTGCGGAACTGGGTTTaGTATTTAACCACAGTTCAC +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKLRNWV*YLTTVH
Trigger: GTGAACTGTGGTTAAATACCAAACCCAGTTCCGCAG...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAACGCCTGGAAACTTGTTaGAAATGCAAATCATCAGGC +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKRLETC*KCKSSG
Trigger: GCCTGATGATTTGCATTTCCAACAAGTTTCCAGGCG...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAAGCATCAGCATCGCCTaGAAACTTGTTGGAAATGCA +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKSISIA*KLVGNA
Trigger: TGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCT...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp AGTGATCATTCTGGGTATGATGAAGACTTTTCCCATGTCCACACTAAACAAGCTCTCTTCTGTCTTCCATaGCTCAGGGACAAAAATCCT +
Preference number: 4 (lower is better)
Translates to: SDHSGYDEDFSHVHTKQALFCLP*LRDKNP
Trigger: AGGATTTTTGTCCCTGAGTCATGGAAGACAGAAGAG...AGCTTGTTTAGTGTGGACATGGGAAAAGTCTTCATCATACCCAGAATGATCACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTACCTCTGTGCAGTGCTTaGGGGCCATTTCATAGTCCT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVPLCSA*GPFHSP
Trigger: AGGACTATGAAATGGCCCTCAAGCACTGCACAGAGG...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR TCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTTCTAAGTCTTCCACGTaGTATCCAGAGAGGGCGTTA +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTSKSST*YPERAL
Trigger: TAACGCCCTCTCTGGATATCACGTGGAAGACTTAGA...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TTCTGTTGCAAGTTAGCAAAAGTCCATGCTCCATCAGGTGCCAGGTATTTCAAGTTCCATGTAACTGCCTaGGAGCTGTTTATTCTCATT +
Preference number: 4 (lower is better)
Translates to: FCCKLAKVHAPSGARYFKFHVTA*ELFILI
Trigger: AATGAGAATAAACAGCTCTCAGGCAGTTACATGGAA...CTTGAAATACCTGGCACCTGATGGAGCATGGACTTTTGCTAACTTGCAACAGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATTGCAGGCTTACAAGTaGGAGCAAAGGTCCATGTCT +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPLQAYK*EQRSMS
Trigger: AGACATGGACCTTTGCTCTCACTTGTAAGCCTGCAA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAAAAAGTTGTCCATTCTaGGCATACTTTGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKKSCPF*AYFAPP
Trigger: TGGAGGTGCAAAGTATGCTCAGAATGGACAACTTTT...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
42% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATGGTGGGAGTCATACTaGTGTCTGGAAACAAAACCC +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPWWESY*CLETKP
Trigger: GGGTTTTGTTTCCAGACATCAGTATGACTCCCACCA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAAGCTGGGGAAGGGGATaGAAGTGGCGATTAGGGATT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVSWGRG*KWRLGI
Trigger: AATCCCTAATCGCCACTTTCATCCCCTTCCCCAGCT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR TCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAACCATGTTACACGGAATaGGGTTCTTCAAATCGTAAC +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKPCYTE*GSSNRN
Trigger: GTTACGATTTGAAGAACCTCATTCCGTGTAACATGG...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGACTCTGAAGGTCTCTaGGACTTTCAAACTGCGAGA +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTDSEGL*DFQTAR
Trigger: TCTCGCAGTTTGAAAGTCTCAGAGACCTTCAGAGTC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCACAGGGACAAAAATCCTaGAGTTCACTGCACTGGGTA +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPQGQKS*SSLHWV
Trigger: TACCCAGTGCAGTGAACTGCAGGATTTTTGTCCCTG...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAAGCTGCTGTTTTGCATaGATCAGGTATTCGAGATCT +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKSCCFA*IRYSRS
Trigger: AGATCTCGAATACCTGATGCATGCAAAACAGCAGCT...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATCTTTGTGTGCTGGCTaGTTCCCACTGGCCATCAGT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVSLCAG*FPLAIS
Trigger: ACTGATGGCCAGTGGGAAGCAGCCAGCACACAAAGA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR GCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAAACCGTGCCTGCTGCTaGCTTAATGTTTCCAGAGCG +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVNRACC*LNVSRA
Trigger: CGCTCTGGAAACATTAAGGCAGCAGCAGGCACGGTT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGTGGAAATGCTGGGTTaGTGGCTACTTCAATGTCTC +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPVEMLG*WLLQCL
Trigger: GAGACATTGAAGTAGCCAGCAACCCAGCATTTCCAC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp AGTGATCATTCTGGGTATGATGAAGACTTTTCCCATGTCCACACTAAACAAGCTATGAGTAAAAGCCATTaGTGCCAGATGAGCTCCCTA +
Preference number: 4 (lower is better)
Translates to: SDHSGYDEDFSHVHTKQAMSKSH*CQMSSL
Trigger: TAGGGAGCTCATCTGGCAGCAATGGCTTTTACTCAT...AGCTTGTTTAGTGTGGACATGGGAAAAGTCTTCATCATACCCAGAATGATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAATTCTCTTTGGTTCCCTaGGTCTGTACTAACTTCTGT +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKFSLVP*VCTNFC
Trigger: ACAGAAGTTAGTACAGACCCAGGGAACCAAAGAGAA...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGTACTGATGCACAACTaGGTGGACAGTCTTTACCCA +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTVLMHN*VDSLYP
Trigger: TGGGTAAAGACTGTCCACCCAGTTGTGCATCAGTAC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTTCACACTCCATGGCCTaGGCAGCTTCATCTAATAGA +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTSHSMA*AASSNR
Trigger: TCTATTAGATGAAGCTGCCCAGGCCATGGAGTGTGA...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTCAGGAGAATCCTACATaGGAACTCAGCAGGGTAATG +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTQENPT*ELSRVM
Trigger: CATTACCCTGCTGAGTTCCCATGTAGGATTCTCCTG...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAATTGCTGCTGTTTGTTaGTACTTCCTGAATGCTGCA +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKIAAVC*YFLNAA
Trigger: TGCAGCATTCAGGAAGTACCAACAAACAGCAGCAAT...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGAAGACTTTTCCCCTTaGGTGGTGATTGCTGCTGTT +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPEDFSP*VVIAAV
Trigger: AACAGCAGCAATCACCACCCAAGGGGAAAAGTCTTC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTAGGTCCAAGAGGGGGTaGAGGAGTATATGCTCTAAT +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTRSKRG*RSICSN
Trigger: ATTAGAGCATATACTCCTCCACCCCCTCTTGGACCT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp AATACTTGTCCCAGTGTGAGGATCTATTCTTTGAACAGGGCTTGGAGATTTTCCCTGTTTTGGTTCTGTTaGCTTTTTCTCTGGTGTTCG +
Preference number: 4 (lower is better)
Translates to: NTCPSVRIYSLNRAWRFSLFWFC*LFLWCS
Trigger: CGAACACCAGAGAAAAAGCCAACAGAACCAAAACAG...GGAAAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCACACTGGGACAAGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp GCAAATTATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGCTGATTTGGCTGAGGTaGTATCTGATTTGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: ANYSAADLTRCAAVELERLIWLR*YLIWLF
Trigger: GAACAACCAAATCAGATACCACCTCAGCCAAATCAG...CCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATAATTTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATACTGTGGTCTGTACTaGATGGGGGAGATGGGACTG +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVYCGLY*MGEMGL
Trigger: CAGTCCCATCTCCCCCATCCAGTACAGACCACAGTA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CCA 90 bp TGGGTGAAATGGCTCTTGACCAATAGCATGTTGATGATTCTGTATTTGTACAAAGCGCTGTGGAAATGCTaGGTTGCTGGCTACTTCAAT +
Preference number: 4 (lower is better)
Translates to: WVKWLLTNSMLMILYLYKALWKC*VAGYFN
Trigger: ATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGC...TTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGAGCCATTTCACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGATGAGATTCTTCTTTaGTACAAGGGCCGACCAGGT +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPDEILL*YKGRPG
Trigger: ACCTGGTCGGCCCTTGTACCAAAGAAGAATCTCATC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TGGGTGAAATGGCTCTTGACCAATAGCATGTTGATGATTCTGTATTTGTACAAATTTGACAGTCTTGGGTaGCGCTATCAACTCTCTGGG +
Preference number: 4 (lower is better)
Translates to: WVKWLLTNSMLMILYLYKFDSLG*RYQLSG
Trigger: CCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAA...TTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGAGCCATTTCACCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAGATCATCAGGAAGATTaGGTTCATTCGAAAGGTTCC +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKDHQED*VHSKGS
Trigger: GGAACCTTTCGAATGAACCCAATCTTCCTGATGATC...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAACGCAGCGCTTATCCTaGAGCTTGCTAACCATTAAC +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPTQRLS*SLLTIN
Trigger: GTTAATGGTTAGCAAGCTCCAGGATAAGCGCTGCGT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTCATACAGAGAAAGAGTaGTGCTGTAACTTGCCGGCT +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTHTEKE*CCNLPA
Trigger: AGCCGGCAAGTTACAGCACCACTCTTTCTCTGTATG...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCACGACCACTGCGGAACTaGGTTTGGTATTTAACCACA +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPRPLRN*VWYLTT
Trigger: TGTGGTTAAATACCAAACCCAGTTCCGCAGTGGTCG...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGGGCCTGTCGCTCCATaGAGACCTTTCTCCACAAAT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVGPVAP*RPFSTN
Trigger: ATTTGTGGAGAAAGGTCTCCATGGAGCGACAGGCCC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTCTCTTCTGTCTTCCATaGCTCAGGGACAAAAATCCT +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTLFCLP*LRDKNP
Trigger: AGGATTTTTGTCCCTGAGTCATGGAAGACAGAAGAG...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGTCCTGCCTCTTAAGTaGTTCACATGCTTGTTCACA +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTVLPLK*FTCLFT
Trigger: TGTGAACAAGCATGTGAATCACTTAAGAGGCAGGAC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATTCCTGGGAATGTGCTaGAGTACACTGGGCACCATA +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVFLGMC*STLGTI
Trigger: TATGGTGCCCAGTGTACTTCAGCACATTCCCAGGAA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATTCTGGGACTTCTTGTaGTACCTGGGTAGTACTATC +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPFWDFL*YLGSTI
Trigger: GATAGTACTACCCAGGTATCACAAGAAGTCCCAGAA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTAAACCCCATTGTCCTTaGTCCTGTCTAGTGCATAGT +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTKPHCP*SCLVHS
Trigger: ACTATGCACTAGACAGGATCAAGGACAATGGGGTTT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATCTTTCTGGGGCATCTaGAAGGTGGAATGTGCGCTT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVSFWGI*KVECAL
Trigger: AAGCGCACATTCCACCTTTCAGATGCCCCAGAAAGA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATCAAGTAATGAAACGTaGAGGTTTCTCTCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPSSNET*RFLSLA
Trigger: TGCCAGGGAGAGAAACCTTCACGTTTCATTACTTGA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp AATACTTGTCCCAGTGTGAGGATCTATTCTTTGAACAGGGCTTGGAGATTTTCCCTGAATTGCTTTCCTTaGACATTTAGCACCCTTTCT +
Preference number: 4 (lower is better)
Translates to: NTCPSVRIYSLNRAWRFSLNCFP*TFSTLS
Trigger: AGAAAGGGTGCTAAATGTTCAAGGAAAGCAATTCAG...GGAAAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCACACTGGGACAAGTATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAGGCTACTGTTTTCATaGCACAGGGCAATAAACCGT +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPRLLFS*HRAINR
Trigger: ACGGTTTATTGCCCTGTGTCATGAAAACAGTAGCCT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TTCTGTTGCAAGTTAGCAAAAGTCCATGCTCCATCAGGTGCCAGGTATTTCAAGTCTGTTCTGTGGATTTaGTTCCAAATCAACCTGTTT +
Preference number: 4 (lower is better)
Translates to: FCCKLAKVHAPSGARYFKSVLWI*FQINLF
Trigger: AAACAGGTTGATTTGGAATCAAATCCACAGAACAGA...CTTGAAATACCTGGCACCTGATGGAGCATGGACTTTTGCTAACTTGCAACAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAATTATGTGTCTTGGGTTaGGATTATCTTTGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKLCVLG*DYLCEE
Trigger: TTCCTCGCAAAGATAATCTCAACCCAAGACACATAA...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp GCAAATTATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGTTATGTGTCTTGGGTTaGGATTATCTTTGCGAGGAA +
Preference number: 4 (lower is better)
Translates to: ANYSAADLTRCAAVELERLCVLG*DYLCEE
Trigger: TTCCTCGCAAAGATAATCTCAACCCAAGACACATAA...CCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATAATTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp AGTGATCATTCTGGGTATGATGAAGACTTTTCCCATGTCCACACTAAACAAGCTAGGGGTTCTCATCAATaGAGCTATTCAGATGTGAAG +
Preference number: 4 (lower is better)
Translates to: SDHSGYDEDFSHVHTKQARGSHQ*SYSDVK
Trigger: CTTCACATCTGAATAGCTTCATTGATGAGAACCCCT...AGCTTGTTTAGTGTGGACATGGGAAAAGTCTTCATCATACCCAGAATGATCACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTAGATACTGTTCGAGATaGCAATGGGTGAAATGGCTC +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTRYCSR*QWVKWL
Trigger: GAGCCATTTCACCCATTGTCATCTCGAACAGTATCT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAAAGCCACACACAAATaGACCGCACTCTTAGCAGAA +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPKATHK*TALLAE
Trigger: TTCTGCTAAGAGTGCGGTTCATTTGTGTGTGGCTTT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATGGTGTCTTTGTAAGTaGTTGGCACCACTACGTGAT +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPWCLCK*LAPLRD
Trigger: ATCACGTAGTGGTGCCAATCACTTACAAAGACACCA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTACATTCTCAGCTGCACTaGCACTTTGGGACTTCAACC +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVHSQLH*HFGTST
Trigger: GGTTGAAGTCCCAAAGTGTCAGTGCAGCTGAGAATG...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAACTTCACTGAGACAATaGGCACACTGTAGGAACTGT +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPTSLRQ*AHCRNC
Trigger: ACAGTTCCTACAGTGTGCTCATTGTCTCAGTGAAGT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAACAAAAGAACTTCACTaGGACAATGAGCACACTGTA +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKTKELH*DNEHTV
Trigger: TACAGTGTGCTCATTGTCTCAGTGAAGTTCTTTTGT...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp GCAAATTATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGACCGTGACTGATAGTTaGTCTTGGTCAATGATTTGT +
Preference number: 4 (lower is better)
Translates to: ANYSAADLTRCAAVELERTVTDS*SWSMIC
Trigger: ACAAATCATTGACCAAGAGCAACTATCAGTCACGGT...CCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATAATTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAAAGCTTGCCAGAATCTaGAATTGCACTTTAAGGTTG +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKKLARI*NCTLRL
Trigger: CAACCTTAAAGTGCAATTGCAGATTCTGGCAAGCTT...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAGTGAGCATGAAGCTTaGCAGAATCTGCAATTGCAC +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPSEHEA*QNLQLH
Trigger: GTGCAATTGCAGATTCTGGCAAGCTTCATGCTCACT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCACTAGTCTCCTGTTGCTaGAGAATATGTTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPLVSCC*RICLTA
Trigger: GGCTGTCAAACATATTCTGCAGCAACAGGAGACTAG...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAATTCGAGGATCAACTaGAAACCTACCCTGGTATCC +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPNSRIN*KPTLVS
Trigger: GGATACCAGGGTAGGTTTGCAGTTGATCCTCGAATT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTTCCTGCTGGATCCATTaGACGGAATGTTCTGATAAG +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTSCWIH*TECSDK
Trigger: CTTATCAGAACATTCCGTGCAATGGATCCAGCAGGA...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAATGAGTAAAAGCCATTaGTGCCAGATGAGCTCCCTA +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPMSKSH*CQMSSL
Trigger: TAGGGAGCTCATCTGGCAGCAATGGCTTTTACTCAT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAATCTGTGGTTTTCGATaGTCCATGTCACTGCCATCT +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPICGFR*SMSLPS
Trigger: AGATGGCAGTGACATGGAGCATCGAAAACCACAGAT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTTCTGCTAGTTCTTCCTaGGAATGTGCTGAAGTACAC +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTSASSS*ECAEVH
Trigger: GTGTACTTCAGCACATTCCCAGGAAGAACTAGCAGA...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAATCTTTGCATGAGTACTaGTTCCAATCCAAAGTCGAA +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKSLHEY*FQSKVE
Trigger: TTCGACTTTGGATTGGAACCAGTACTCATGCAAAGA...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTTCTGTTAGGACTCCATaGTATGGTGGGAGTCATACT +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTSVRTP*YGGSHT
Trigger: AGTATGACTCCCACCATACCATGGAGTCCTAACAGA...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTACAGCTGGATTGCAAGTaGAGTGGTAATGGCCAGAAC +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVQLDCK*SGNGQN
Trigger: GTTCTGGCCATTACCACTCCACTTGCAATCCAGCTG...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGAAGGTTTCTCTCCCTaGCAAACTCGCTGTAAACAA +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTEGFSP*QTRCKQ
Trigger: TTGTTTACAGCGAGTTTGCCAGGGAGAGAAACCTTC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTACTGATGCTGATTTTGTaGCTGGCCTATGGTGACAGG +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVLMLIL*LAYGDR
Trigger: CCTGTCACCATAGGCCAGCCACAAAATCAGCATCAG...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CCA 90 bp TATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCAAGATTTATGTGTCTTaGGTTGAGATTATCTTTGCG +
Preference number: 4 (lower is better)
Translates to: YSAADLTRCAAVELERVVKIYVS*VEIIFA
Trigger: CGCAAAGATAATCTCAACCCAAGACACATAAATCTT...GACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTACAAGGTGTGCTGCTGTaGAATTGGAAAGGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVQGVLL*NWKGWS
Trigger: AGACCACCCTTTCCAATTCCACAGCAGCACACCTTG...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGCGCTGTGGAAATGCTaGGTTGCTGGCTACTTCAAT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVALWKC*VAGYFN
Trigger: ATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTTCAACTGGCCATTTCTaGTACAGAAACCCAGCATGT +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTSTGHF*YRNPAC
Trigger: ACATGCTGGGTTTCTGTACCAGAAATGGCCAGTTGA...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAACTATCCTATGGTGGATaGAGATTACAACAACACATC +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKLSYGG*RLQQHI
Trigger: GATGTGTTGTTGTAATCTCCATCCACCATAGGATAG...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAATCTGCTCTGAAGAAATaGAAGCTGGTAATACTTGGT +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKSALKK*KLVILG
Trigger: ACCAAGTATTACCAGCTTCCATTTCTTCAGAGCAGA...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGTGATTTTCAAAGTGTaGTTCCTGGACTGGCAGCAT +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTVIFKV*FLDWQH
Trigger: ATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAATATGTTTGACAGCCTaGGCTAGAGTGAACGTTTTG +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPICLTA*ARVNVL
Trigger: CAAAACGTTCACTCTAGCTCAGGCTGTCAAACATAT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGAGATCAAACAGTACTaGTGCACAACTGGGTGGACA +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVEIKQY*CTTGWT
Trigger: TGTCCACCCAGTTGTGCATCAGTACTGTTTGATCTC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR TCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTCGTATTCTAAACACTTaGTCAGCATATGGAGTCACC +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTRILNT*SAYGVT
Trigger: GGTGACTCCATATGCTGATCAAGTGTTTAGAATACG...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAATCTGTTCTGTGGATTTaGTTCCAAATCAACCTGTTT +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKSVLWI*FQINLF
Trigger: AAACAGGTTGATTTGGAATCAAATCCACAGAACAGA...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TGGGTGAAATGGCTCTTGACCAATAGCATGTTGATGATTCTGTATTTGTACAAATGCAAAAGTCTTGATTaGGGTGGTGGCATTTCAGCT +
Preference number: 4 (lower is better)
Translates to: WVKWLLTNSMLMILYLYKCKSLD*GGGISA
Trigger: AGCTGAAATGCCACCACCTCAATCAAGACTTTTGCA...TTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGAGCCATTTCACCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAATGTTAAGGGGATGGTaGGCAAGAAATAATGTACGG +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPMLRGW*ARNNVR
Trigger: CCGTACATTATTTCTTGCTCACCATCCCCTTAACAT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAATTAGAGCCTCTTAGATaGGGTATCATTTACTGCAAA +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKLEPLR*GIIYCK
Trigger: TTTGCAGTAAATGATACCTCATCTAAGAGGCTCTAA...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp TGGGTGAAATGGCTCTTGACCAATAGCATGTTGATGATTCTGTATTTGTACAAACTAGTCTCCTGTTGCTaGAGAATATGTTTGACAGCC +
Preference number: 4 (lower is better)
Translates to: WVKWLLTNSMLMILYLYKLVSCC*RICLTA
Trigger: GGCTGTCAAACATATTCTGCAGCAACAGGAGACTAG...TTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGAGCCATTTCACCCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR GCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGTCTTGCCTGGGGATTaGCTGCTTCTACATATGGAT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVVLPGD*LLLHMD
Trigger: ATCCATATGTAGAAGCAGGCAATCCCCAGGCAAGAC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR GCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTACACTGGCCATCAGTTTaGCCTCATAGAAAAGCTCAG +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVHWPSV*PHRKAQ
Trigger: CTGAGCTTTTCTATGAGGGCAAACTGATGGCCAGTG...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGGATTCTCACTTCCATaGATGTGGATCAAGATTGAC +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPGFSLP*MWIKID
Trigger: GTCAATCTTGATCCACATGCATGGAAGTGAGAATCC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp AATACTTGTCCCAGTGTGAGGATCTATTCTTTGAACAGGGCTTGGAGATTTTCCCAAAGTCGAAAACTATaGTTTGGCGAAAAGTTCCAA +
Preference number: 4 (lower is better)
Translates to: NTCPSVRIYSLNRAWRFSQSRKL*FGEKFQ
Trigger: TTGGAACTTTTCGCCAAACCATAGTTTTCGACTTTG...GGAAAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCACACTGGGACAAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCACACTTGATCAGCATATaGAGTCACCACACCAATACT +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPHLISI*SHHTNT
Trigger: AGTATTGGTGTGGTGACTCCATATGCTGATCAAGTG...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTCTGATTTGGCTGAGGTaGTATCTGATTTGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTLIWLR*YLIWLF
Trigger: GAACAACCAAATCAGATACCACCTCAGCCAAATCAG...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGAAATGCTGGGTTGCTaGCTACTTCAATGTCTCTGC +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVEMLGC*LLQCLC
Trigger: GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAAACTCTATCCTATGGTaGATGGAGATTACAACAACA +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKNSILW*MEITTT
Trigger: TGTTGTTGTAATCTCCATCCACCATAGGATAGAGTT...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGCATGGTTGGAAAGATaGCATTATGTAATGCTGAGG +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTAWLER*HYVMLR
Trigger: CCTCAGCATTACATAATGCCATCTTTCCAACCATGC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAGTTACTCTTTCAAGATaGAGATGGTGTCTTTGTAAG +
Preference number: 4 (lower is better)
Translates to: PKVGKFISFLSSSNASIKVTLSR*RWCLCK
Trigger: CTTACAAAGACACCATCTCCATCTTGAAAGAGTAAC...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATCACTTCCATGCATGTaGATCAAGATTGACCCTAAG +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPSLPCM*IKIDPK
Trigger: CTTAGGGTCAATCTTGATCCACATGCATGGAAGTGA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CAA 72 bp AAGAACATCAGCTGTACTCAGAAGACACGCCTCATTTaGATGGAAACTTGCAATGATTCTTACACAAGACGT +
Preference number: 4 (lower is better)
Translates to: KNISCTQKTRLI*METCNDSYTRR
Trigger: ACGTCTTGTGTAAGAATCATTGCAAGTTTCCATCAAAATGAGGCGTGTCTTCTGAGTACAGCTGATGTTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTTCTCTGATTAAGTCTTaGAACCTTGAGTATGTGGTC +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTSLIKS*NLEYVV
Trigger: GACCACATACTCAAGGTTTCAAGACTTAATCAGAGA...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATCTTCAGAACAAGGTTaGACTGAGCTAGATGAGATT +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPSSEQG*TELDEI
Trigger: AATCTCATCTAGCTCAGTTCAACCTTGTTCTGAAGA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAGACACGCCTCATTTTaGTGGAAACTTGCAATGATT +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPRHASF*WKLAMI
Trigger: AATCATTGCAAGTTTCCATCAAAATGAGGCGTGTCT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATTGTTCTTCACACCCTaGCTCTTAACAAAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVLFFTP*LLTKVA
Trigger: AGCCACCTTTGTTAAGAGTCAGGGTGTGAAGAACAA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAATACTGGCTGAAGTTTaGGAACCATTGCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVILAEV*EPLLHP
Trigger: AGGATGGAGCAATGGTTCTCAAACTTCAGCCAGTAT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAAAGACGTTCAGACTCTaGAGGTCTCTGAGACTTTCA +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVKTFRL*RSLRLS
Trigger: TGAAAGTCTCAGAGACCTTCAGAGTCTGAACGTCTT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTACATGGTCTGGATTTATaGAAATCCAGGACCCTTCCT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVHGLDL*KSRTLP
Trigger: AGGAAGGGTCCTGGATTTTCATAAATCCAGACCATG...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAACCGTGACTGATAGTTaGTCTTGGTCAATGATTTGT +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPTVTDS*SWSMIC
Trigger: ACAAATCATTGACCAAGAGCAACTATCAGTCACGGT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAATCCTAGTCTCCTGTTaGTGCAGAATATGTTTGACA +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPILVSC*CRICLT
Trigger: TGTCAAACATATTCTGCAGCAACAGGAGACTAGGAT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAAATTCGAGGATCAACTaGAAACCTACCCTGGTATCC +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVNSRIN*KPTLVS
Trigger: GGATACCAGGGTAGGTTTGCAGTTGATCCTCGAATT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR GCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGTTATAGGCCATTGCTaGCTGATGTGTAATAATTCG +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTVIGHC*LMCNNS
Trigger: CGAATTATTACACATCAGGCAGCAATGGCCTATAAC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAACATCTTTTACGTCTaGAGCTTTGCTCTTGACATG +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPNIFYV*SFALDM
Trigger: CATGTCAAGAGCAAAGCTGCAGACGTAAAAGATGTT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGAAACTTGTTGGAAATaGAAATCATCAGGCTCCAGA +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTETCWK*KSSGSR
Trigger: TCTGGAGCCTGATGATTTGCATTTCCAACAAGTTTC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATGTGCTGAAGTACACTaGGCACCATACCTACAGATT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVCAEVH*APYLQI
Trigger: AATCTGTAGGTATGGTGCCCAGTGTACTTCAGCACA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAACTTCTTGTGATACCTaGGTAGTACTATCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVTSCDT*VVLSPA
Trigger: TGCCGGAGATAGTACTACCCAGGTATCACAAGAAGT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATCTTTGAACAGGGCTTaGAGATTTTCCCAAATTTGG +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPSLNRA*RFSQIW
Trigger: CCAAATTTGGGAAAATCTCCAAGCCCTGTTCAAAGA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATTGTCTAAAACGGACTaGGTAAATAGCTGGTCAGCA +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVLSKTD*VNSWSA
Trigger: TGCTGACCAGCTATTTACTCAGTCCGTTTTAGACAA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAAAAAGTTGTCCATTCTaGGCATACTTTGCACCTCCA +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVKSCPF*AYFAPP
Trigger: TGGAGGTGCAAAGTATGCTCAGAATGGACAACTTTT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR TCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAATAAATAAACAGCATTaGCTTTGGTCATCACCAGTC +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPINKQH*LWSSPV
Trigger: GACTGGTGATGACCAAAGTCAATGCTGTTTATTTAT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TGGGTGAAATGGCTCTTGACCAATAGCATGTTGATGATTCTGTATTTGTACAAATCTCTGATTAAGTCTTaGAACCTTGAGTATGTGGTC +
Preference number: 4 (lower is better)
Translates to: WVKWLLTNSMLMILYLYKSLIKS*NLEYVV
Trigger: GACCACATACTCAAGGTTTCAAGACTTAATCAGAGA...TTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGAGCCATTTCACCCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTACCGGGGATGAAAAGTTaGAAGAAGATTGGTTACTGT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVPGMKS*KKIGYC
Trigger: ACAGTAACCAATCTTCTTTCAACTTTTCATCCCCGG...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAAAGAATCAGGTCAGATaGCTGGCACAGAAATCAGAT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVKNQVR*LAQKSD
Trigger: ATCTGATTTCTGTGCCAGTCATCTGACCTGATTCTT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGGGTGGAGGAGTATATaGTCTAATAGGATTGCCAAT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVGWRSI*SNRIAN
Trigger: ATTGGCAATCCTATTAGAGCATATACTCCTCCACCC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR GCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATTTAACAAGGTGTGCTaGTGTGGAATTGGAAAGGGT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVFNKVC*CGIGKG
Trigger: ACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR GCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGTAAGATTCACTCCTTaGAACAATGGTCTTGACATT +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTVRFTP*NNGLDI
Trigger: AATGTCAAGACCATTGTTGCAAGGAGTGAATCTTAC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAACTTCTACTCTGTGTTaGAACCTATGTAATTTGCCA +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPTSTLC*NLCNLP
Trigger: TGGCAAATTACATAGGTTGCAACACAGAGTAGAAGT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTACACTTGATCAGCATATaGAGTCACCACACCAATACT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVHLISI*SHHTNT
Trigger: AGTATTGGTGTGGTGACTCCATATGCTGATCAAGTG...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTTCTAAAGCCTCTAACTaGGCTTTGATCTGTTCAAAA +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTSKASN*ALICSK
Trigger: TTTTGAACAGATCAAAGCCCAGTTAGAGGCTTTAGA...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTCATTTGTACATCAACTaGCCATTTCTGGTACAGAAA +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTHLYIN*PFLVQK
Trigger: TTTCTGTACCAGAAATGGCCAGTTGATGTACAAATG...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTAAACCTGTTTTTGAATaGATCATCAGGAAGATTGGG +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTKPVFE*IIRKIG
Trigger: CCCAATCTTCCTGATGATCCATTCAAAAACAGGTTT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCACTATATGAATGTCTCTaGGTTTTCTTAACACTCCAG +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPLYECL*VFLTLQ
Trigger: CTGGAGTGTTAAGAAAACCCAGAGACATTCATATAG...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAATCAGGTCAGATGACTaGCACAGAAATCAGATACAG +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVIRSDD*HRNQIQ
Trigger: CTGTATCTGATTTCTGTGCCAGTCATCTGACCTGAT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTAGATGGCTGTATAACTaGTACTTTGAAGAGATGAAC +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTRWLYN*YFEEMN
Trigger: GTTCATCTCTTCAAAGTACCAGTTATACAGCCATCT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGAAGACTCTCGATTTTaGTGCGTTCTATTTCCAATG +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVEDSRF*CVLFPM
Trigger: CATTGGAAATAGAACGCATCAAAATCGAGAGTCTTC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGATGAGACAGTTCTCTaGTTAAGTCTTGAAACCTTG +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVDETVL*LSLETL
Trigger: CAAGGTTTCAAGACTTAATCAGAGAACTGTCTCATC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGCATACACGACCCCATaGCCCTTAACTAAATATAAA +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVAYTTP*PLTKYK
Trigger: TTTATATTTAGTTAAGGGTCATGGGGTCGTGTATGC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAAATTCTGATACTGGCTaGAGTTTGAGAACCATTGCT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVNSDTG*SLRTIA
Trigger: AGCAATGGTTCTCAAACTTCAGCCAGTATCAGAATT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTATCTTCTGTAGAAGCTaGATCAATCATTACTCTTTG +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTIFCRS*INHYSL
Trigger: CAAAGAGTAATGATTGATGCAGCTTCTACAGAAGAT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAAAGCTTGCCAGAATCTaGAATTGCACTTTAAGGTTG +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVKLARI*NCTLRL
Trigger: CAACCTTAAAGTGCAATTGCAGATTCTGGCAAGCTT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR GCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAACATTTATCTAGCTTaGGTTGTAGTCCTGTATATG +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPNIYLA*VVVLYM
Trigger: CATATACAGGACTACAACGCAAGCTAGATAAATGTT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGCAGCACTATTAGAATaGGTGCAAATGAGAATCCTA +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVAALLE*VQMRIL
Trigger: TAGGATTCTCATTTGCACCCATTCTAATAGTGCTGC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAAATCTAAGTCCTCTGTaGAATCTTCCAGAAGTTGCT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVNLSPL*NLPEVA
Trigger: AGCAACTTCTGGAAGATTCCACAGAGGACTTAGATT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTAGGTGGTATCTGATTTaGTTGTTCAGGCAAATTATT +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTRWYLI*LFRQII
Trigger: AATAATTTGCCTGAACAACCAAATCAGATACCACCT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAAGCACATAGCTACGTaGCAAAACTTTTTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPKHIAT*QNFFFF
Trigger: AAAGAAGAAAAAGTTTTGCCACGTAGCTATGTGCTT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAGGTTCTTTAAAGCATaGTTGGAAAGATGGCATTAT +
Preference number: 4 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPRFFKA*LERWHY
Trigger: ATAATGCCATCTTTCCAACCATGCTTTAAAGAACCT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTCTGTATATTCTACGATaGTCTTCACGTGTACTTTTA +
Preference number: 4 (lower is better)
Translates to: LLHIASTFMGFKESGQMTLYILR*SSRVLL
Trigger: TAAAAGTACACGTGAAGACCATCGTAGAATATACAG...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTACTGTGCATCTATAGATaGAGTCCAACTACCTTAATT +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVLCIYR*SPTTLI
Trigger: AATTAAGGTAGTTGGACTTCATCTATAGATGCACAG...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR TCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAATTGGCACCACTACGTaGTATTTTGAACAAGAAATC +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVIGTTT*YFEQEI
Trigger: GATTTCTTGTTCAAAATATCACGTAGTGGTGCCAAT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR GCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAATCTCCGGCAGATATTaGAATGATACTAAAATGAGG +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVISGRY*NDTKMR
Trigger: CCTCATTTTAGTATCATTGCAATATCTGCCGGAGAT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATTAAAGTTAGAAAAGTaGCTACTGTGGTCTGTACTG +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVLKLEK*LLWSVL
Trigger: CAGTACAGACCACAGTAGCCACTTTTCTAACTTTAA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATTTAAGGATTATCTGTaGTTTTCGATGCTCCATGTC +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVFKDYL*FSMLHV
Trigger: GACATGGAGCATCGAAAACCACAGATAATCCTTAAA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CCA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATATAGGAAGCAGGCATaGTCTGGATTTATGAAAATC +
Preference number: 4 (lower is better)
Translates to: FYSCTINLLAASLMQTYVYRKQA*SGFMKI
Trigger: GATTTTCATAAATCCAGACCATGCCTGCTTCCTATA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
3UTR CAA 72 bp AGGAAGAGTAAGCTTGTTGTAAGTCAAAATAAGCATTaGATGCAGAATCTAAGAAGAGTATCAGATGGAAGC +
Preference number: 4 (lower is better)
Translates to: RKSKLVVSQNKH*MQNLRRVSDGS
Trigger: GCTTCCATCTGATACTCTTCTTAGATTCTGCATCAAATGCTTATTTTGACTTACAACAAGCTTACTCTTCCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GCTTCCAGTCTGCCCTCACTGGCGGCTGATGTAATCCCAGGGGCGGCTGAGGAATGGGGGCTACTGCTATaGGCCGACTCCGCGATCTGC +
Preference number: 5 (lower is better)
Translates to: ASSLPSLAADVIPGAAEEWGLLL*ADSAIC
Trigger: GCAGATCGCGGAGTCGGCCAATAGCAGTAGCCCCCA...TTCCTCAGCCGCCCCTGGGATTACATCAGCCGCCAGTGAGGGCAGACTGGAAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp AGGAGGGGGCCTGGGCTTTGGAGGGGCCCGCAGAGCGCTGGCATAGGACATGGCGTCTGGTGGGATTTTTaGGTGCTGACAGTAACTGAC +
Preference number: 5 (lower is better)
Translates to: RRGPGLWRGPQSAGIGHGVWWDF*VLTVTD
Trigger: GTCAGTTACTGTCAGCACCAAAAAATCCCACCAGAC...GCCATGTCCTATGCCAGCGCTCTGCGGGCCCCTCCAAAGCCCAGGCCCCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS CCA 90 bp CACAGAGGAGACATGTGGAGAAGCAGCATTCCCACGATGGGACTGTaGGTTATGGGGGTTACGAGGGAAGGCTGGCAGTCCCACTGCCCC +
Preference number: 5 (lower is better)
Translates to: HRGDMWRSSIPTMGL*VMGVTREGWQSHCP
Trigger: GGGGCAGTGGGACTGCCAGCCTTCCCTCGTAACCCCCATAACCCACAGTCCCATCGTGGGAATGCTGCTTCTCCACATGTCTCCTCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584641.5
CDS-3UTR CAA 90 bp ATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTGAGCAGGACTGTGGCCTTCTaGCAGCATGGGAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: ILRGFDSLGWRYQLSGLSRTVAF*QHGRGL
Trigger: CAGCCCCCTCCCATGCTGCAAGAAGGCCACAGTCCT...GCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS CCA 90 bp GAGACATGTGGAGAAGCAGCATTCCCACGATGGGACTGTGGGTTATaGGGGTTACGAGGGAAGGCTGGCAGTCCCACTGCCCCACCTTCA +
Preference number: 5 (lower is better)
Translates to: ETCGEAAFPRWDCGL*GLRGKAGSPTAPPS
Trigger: TGAAGGTGGGGCAGTGGGACTGCCAGCCTTCCCTCGTAACCCCCATAACCCACAGTCCCATCGTGGGAATGCTGCTTCTCCACATGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000584641.5
CDS-3UTR CAA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGAAGGCATCTTCTCCCTaGGCCAGTCCTTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: QFLEERQRVATLLGLLRRKASSP*ASPSPS
Trigger: GCTGGGAGAAGGACTGGCCAAGGGAGAAGATGCCTT...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp GGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCTCTGCTTGGAAAGGGTGGTCTaGGTAGCTGGGGAAGGGGAT +
Preference number: 5 (lower is better)
Translates to: GVGGAVEMLGCWLLQCLCLERVV*VAGEGD
Trigger: ATCCCCTTCCCCAGCTACCAAGACCACCCTTTCCAA...GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp GGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCTCTGCGGGGGTTTGACAGTCTaGGGTGGCGCTATCAACTCT +
Preference number: 5 (lower is better)
Translates to: GVGGAVEMLGCWLLQCLCGGLTV*GGAINS
Trigger: AGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCC...GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp GTGTGGGTATGGAGCGCTGCCCTGACTGAGAAAGGCATGATGCTCGCTCCACTGGACTCCGCGATCTGCTaGTTAGGCATAAGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: VWVWSAALTEKGMMLAPLDSAIC*LGIRGG
Trigger: TCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTC...CAGTGGAGCGAGCATCATGCCTTTCTCAGTCAGGGCAGCGCTCCATACCCACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS GCA 90 bp GGATACAGGTTGGAGCTTCCCTTTCAGCTGCATGCAGCAAAGCACTaGCCGAAAGGCATCTTCTCCCTTGGCCAGTCCTTCTCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: GYRLELPFQLHAAKH*PKGIFSLGQSFSQH
Trigger: GTGCTGGGAGAAGGACTGGCCAAGGGAGAAGATGCCTTTCGGGCAGTGCTTTGCTGCATGCAGCTGAAAGGGAAGCTCCAACCTGTATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
ENST00000580662.5
ENST00000584641.5
CDS-3UTR CAA 90 bp AGGAGGGGGCCTGGGCTTTGGAGGGGCCCGCAGAGCGCTGGCATAGGACATGGCCAGGTCCGGAATTATTaGTATCACTTTTACCATTTC +
Preference number: 5 (lower is better)
Translates to: RRGPGLWRGPQSAGIGHGQVRNY*YHFYHF
Trigger: GAAATGGTAAAAGTGATACAAATAATTCCGGACCTG...GCCATGTCCTATGCCAGCGCTCTGCGGGCCCCTCCAAAGCCCAGGCCCCCTCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp GGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCTCTGCAATGGTGGATACAGGTaGGAGCTTCCCTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: GVGGAVEMLGCWLLQCLCNGGYR*ELPFQL
Trigger: CAGCTGAAAGGGAAGCTCCAACCTGTATCCACCATT...GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp ATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTGAGCCACAGCAACCAGGGATaGTGCTCTTGTGATGGCAGT +
Preference number: 5 (lower is better)
Translates to: ILRGFDSLGWRYQLSGLSHSNQG*CSCDGS
Trigger: ACTGCCATCACAAGAGCACAATCCCTGGTTGCTGTG...GCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp GTGTGGGTATGGAGCGCTGCCCTGACTGAGAAAGGCATGATGCTCGCTCCACTGCTGAGCCAGACTGTCTaGAGGAGTGCTTACTTCTTC +
Preference number: 5 (lower is better)
Translates to: VWVWSAALTEKGMMLAPLLSQTV*RSAYFF
Trigger: GAAGAAGTAAGCACTCCTCAAGACAGTCTGGCTCAG...CAGTGGAGCGAGCATCATGCCTTTCTCAGTCAGGGCAGCGCTCCATACCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp ATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTGAGCGTTCTCCGACTTCAGTaGATCCTCAGGGGGTTTGAC +
Preference number: 5 (lower is better)
Translates to: ILRGFDSLGWRYQLSGLSVLRLQ*ILRGFD
Trigger: GTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAAC...GCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS GCA 90 bp TGGCAAGAATGGTGGATACAGGTTGGAGCTTCCCTTTCAGCTGCATaGAGCAAAGCACTGCCCGAAAGGCATCTTCTCCCTTGGCCAGTC +
Preference number: 5 (lower is better)
Translates to: WQEWWIQVGASLSAA*SKALPERHLLPWPV
Trigger: GACTGGCCAAGGGAGAAGATGCCTTTCGGGCAGTGCTTTGCTGCATGCAGCTGAAAGGGAAGCTCCAACCTGTATCCACCATTCTTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
ENST00000580662.5
ENST00000584641.5
CDS GCA 90 bp GACTTGGCAAGAATGGTGGATACAGGTTGGAGCTTCCCTTTCAGCTaGATGCAGCAAAGCACTGCCCGAAAGGCATCTTCTCCCTTGGCC +
Preference number: 5 (lower is better)
Translates to: DLARMVDTGWSFPFS*MQQSTARKASSPLA
Trigger: GGCCAAGGGAGAAGATGCCTTTCGGGCAGTGCTTTGCTGCATGCAGCTGAAAGGGAAGCTCCAACCTGTATCCACCATTCTTGCCAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
ENST00000580662.5
ENST00000584641.5
CDS GCA 90 bp GCCTGTCCCATAGGGTCCGATGATAAGCACAGGCGGCAGCTGGATTaGAAGTGGAGTGGTAATGGCCAGAACAGCCTCTTTCTGTTTTGC +
Preference number: 5 (lower is better)
Translates to: ACPIGSDDKHRRQLD*KWSGNGQNSLFLFC
Trigger: GCAAAACAGAAAGAGGCTGTTCTGGCCATTACCACTCCACTTGCAATCCAGCTGCCGCCTGTGCTTATCATCGGACCCTATGGGACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358691.10
ENST00000579953.5
ENST00000580168.5
CDS-3UTR CAA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGCTCCTGATGCTGATTTaGTGGCTGGCCTATGGTGAC +
Preference number: 5 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKLLMLI*WLAYGD
Trigger: GTCACCATAGGCCAGCCACAAAATCAGCATCAGGAG...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS GCA 90 bp CCCTTGGGTGGTGATTGCTGCTGTTTGTTGGTACTTCCTGAATGCTaGAGTCTTAGAGCCCGGGGGATAAATTCAGGTGCCAGCGGATTC +
Preference number: 5 (lower is better)
Translates to: PLGGDCCCLLVLPEC*SLRARGINSGASGF
Trigger: GAATCCGCTGGCACCTGAATTTATCCCCCGGGCTCTAAGACTGCAGCATTCAGGAAGTACCAACAAACAGCAGCAATCACCACCCAAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000580168.5
CDS GCA 90 bp TTCCCCTTGGGTGGTGATTGCTGCTGTTTGTTGGTACTTCCTGAATaGTGCAGTCTTAGAGCCCGGGGGATAAATTCAGGTGCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: FPLGGDCCCLLVLPE*CSLRARGINSGASG
Trigger: TCCGCTGGCACCTGAATTTATCCCCCGGGCTCTAAGACTGCAGCATTCAGGAAGTACCAACAAACAGCAGCAATCACCACCCAAGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000580168.5
CDS CCA 90 bp AGGGACTCTCCTGTGAGTGACTTGGCAAGAATGGTGGATACAGGTTaGAGCTTCCCTTTCAGCTGCATGCAGCAAAGCACTGCCCGAAAG +
Preference number: 5 (lower is better)
Translates to: RDSPVSDLARMVDTG*SFPFSCMQQSTARK
Trigger: CTTTCGGGCAGTGCTTTGCTGCATGCAGCTGAAAGGGAAGCTCCAACCTGTATCCACCATTCTTGCCAAGTCACTCACAGGAGAGTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
ENST00000580662.5
ENST00000584641.5
CDS GCA 90 bp ACCTTGGGTGGTGATTGCTGCTGTTTGTTGGTACTTCCTGAATGCTaGAGTCTTAGAGCCCGGGGGATAAATTCAGGTGCCAGCGGATTC +
Preference number: 5 (lower is better)
Translates to: TLGGDCCCLLVLPEC*SLRARGINSGASGF
Trigger: GAATCCGCTGGCACCTGAATTTATCCCCCGGGCTCTAAGACTGCAGCATTCAGGAAGTACCAACAAACAGCAGCAATCACCACCCAAGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS CCA 90 bp TCTATTTCCAATGGACAAGGCCCTGTGAAGTCTGCCATGGAGTACTaGCCAAGAGAAAGAAGGGCCTCTGTGCAGTGCTTGAGGGCCATT +
Preference number: 5 (lower is better)
Translates to: SISNGQGPVKSAMEY*PRERRASVQCLRAI
Trigger: AATGGCCCTCAAGCACTGCACAGAGGCCCTTCTTTCTCTTGGCCAGTACTCCATGGCAGACTTCACAGGGCCTTGTCCATTGGAAATAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579861.1
ENST00000579953.5
ENST00000580168.5
ENST00000580662.5
ENST00000580963.1
ENST00000581159.5
ENST00000584641.5
CDS-3UTR CAA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGCATTCTGAGCATACTTaGCACCTCCAGAAACACCAG +
Preference number: 5 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKHSEHT*HLQKHQ
Trigger: CTGGTGTTTCTGGAGGTGCAAAGTATGCTCAGAATG...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGGATTGCTGCTGTTTGTaGGTACTTCCTGAATGCTGC +
Preference number: 5 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKDCCCL*VLPECC
Trigger: GCAGCATTCAGGAAGTACCAACAAACAGCAGCAATC...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp GGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCTCTGCGGGTTGAGATTATCTTaGCGAGGAAATTTGGTACTG +
Preference number: 5 (lower is better)
Translates to: GVGGAVEMLGCWLLQCLCGLRLS*RGNLVL
Trigger: CAGTACCAAATTTCCTCGCAAAGATAATCTCAACCC...GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTTTGGAAAGGGTGGTCTaGGTAGCTGGGGAAGGGGAT +
Preference number: 5 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETLERVV*VAGEGD
Trigger: ATCCCCTTCCCCAGCTACCAAGACCACCCTTTCCAA...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCTTGGTAAAGAATGGGGCCGGGTaGTGCAATGGCTCTCAGAGG +
Preference number: 5 (lower is better)
Translates to: AADLTRCAAVELERVVLVKNGAG*CNGSQR
Trigger: CCTCTGAGAGCCATTGCACAACCCGGCCCCATTCTT...TACCAAGACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp GGGCTACTGCTATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGATTCCCGTGTTTCACTTaGATCACGATGAGACAGTTC +
Preference number: 5 (lower is better)
Translates to: GLLLLADSAICLLGIRGGFPCFT*ITMRQF
Trigger: GAACTGTCTCATCGTGATCAAAGTGAAACACGGGAA...TCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAATAGCAGTAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp ATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTGAGCTGGGTGAAATGGCTCTaGACCAATAGCATGTTGATG +
Preference number: 5 (lower is better)
Translates to: ILRGFDSLGWRYQLSGLSWVKWL*TNSMLM
Trigger: CATCAACATGCTATTGGTCAAGAGCCATTTCACCCA...GCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp GTGTGGGTATGGAGCGCTGCCCTGACTGAGAAAGGCATGATGCTCGCTCCACTGTCCGGGGATGAAAAGTaGAAAGAAGATTGGTTACTG +
Preference number: 5 (lower is better)
Translates to: VWVWSAALTEKGMMLAPLSGDEK*KEDWLL
Trigger: CAGTAACCAATCTTCTTTCAACTTTTCATCCCCGGA...CAGTGGAGCGAGCATCATGCCTTTCTCAGTCAGGGCAGCGCTCCATACCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp GGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTCTCTGCCTCTTGGCTGCTAGCTaGATGCAAACATATGTAACA +
Preference number: 5 (lower is better)
Translates to: GVGGAVEMLGCWLLQCLCLLAAS*MQTYVT
Trigger: TGTTACATATGTTTGCATCAAGCTAGCAGCCAAGAG...GCAGAGACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS GCA 90 bp TTTACCTTGGGTGGTGATTGCTGCTGTTTGTTGGTACTTCCTGAATaGTGCAGTCTTAGAGCCCGGGGGATAAATTCAGGTGCCAGCGGA +
Preference number: 5 (lower is better)
Translates to: FTLGGDCCCLLVLPE*CSLRARGINSGASG
Trigger: TCCGCTGGCACCTGAATTTATCCCCCGGGCTCTAAGACTGCAGCATTCAGGAAGTACCAACAAACAGCAGCAATCACCACCCAAGGTAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp GGGCTGCTGCTCCGGAATTACAGCTTCTGCAGGAGGAGACTGTGGCCGATGAGCGTCGAAAACTATGGTTaGGCGAAAAGTTCCAAATAT +
Preference number: 5 (lower is better)
Translates to: GLLLRNYSFCRRRLWPMSVENYG*AKSSKY
Trigger: ATATTTGGAACTTTTCGCCAAACCATAGTTTTCGAC...GCTCATCGGCCACAGTCTCCTCCTGCAGAAGCTGTAATTCCGGAGCAGCAGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTCTCCTGATGCTGATTTaGTGGCTGGCCTATGGTGAC +
Preference number: 5 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETLLMLI*WLAYGD
Trigger: GTCACCATAGGCCAGCCACAAAATCAGCATCAGGAG...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GTGTGGGTATGGAGCGCTGCCCTGACTGAGAAAGGCATGATGCTCGCTCCACTGGAGGTGGTATCTGATTaGGTTGTTCAGGCAAATTAT +
Preference number: 5 (lower is better)
Translates to: VWVWSAALTEKGMMLAPLEVVSD*VVQANY
Trigger: ATAATTTGCCTGAACAACCAAATCAGATACCACCTC...CAGTGGAGCGAGCATCATGCCTTTCTCAGTCAGGGCAGCGCTCCATACCCACAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp CTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGATGCTGCAGCACACTGTAGCTGGACTACCTGATTaGGCTGAGGTGGTATCTGAT +
Preference number: 5 (lower is better)
Translates to: LLVRHKGWKLAKMLQHTVAGLPD*AEVVSD
Trigger: ATCAGATACCACCTCAGCCAAATCAGGTAGTCCAGC...TACAGTGTGCTGCAGCATCTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp AAGGGGATGAAAGTGGCGATTAGGGATTGCATACTGTGCGTGGGGAGCAGGAAGTGTGGAAATGCTGGGTaGCTGGCTACTTCAATGTCT +
Preference number: 5 (lower is better)
Translates to: KGMKVAIRDCILCVGSRKCGNAG*LATSMS
Trigger: AGACATTGAAGTAGCCAGCAACCCAGCATTTCCACA...CTTCCTGCTCCCCACGCACAGTATGCAATCCCTAATCGCCACTTTCATCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp CTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGATGCTGCAGCACACTGTAAACGAGAAAGGTGAGTaGAATATCTGGGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: LLVRHKGWKLAKMLQHTVNEKGE*NIWGGR
Trigger: CCTCCCACCCCAGATATTCAACTCACCTTTCTCGTT...TACAGTGTGCTGCAGCATCTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGTTCTCCGACTTCAGTaGATCCTCAGGGGGTTTGAC +
Preference number: 5 (lower is better)
Translates to: GLAASASPGNLLEMQIIRVLRLQ*ILRGFD
Trigger: GTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAAC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp AGTGATCATTCTGGGTATGATGAAGACTTTTCCCATGTCCACACTAAACAAGCTGGGTCGCTACTCTTCTaGGCCTGCTCAGGAGGGGGC +
Preference number: 5 (lower is better)
Translates to: SDHSGYDEDFSHVHTKQAGSLLF*ACSGGG
Trigger: GCCCCCTCCTGAGCAGGCCAAGAAGAGTAGCGACCC...AGCTTGTTTAGTGTGGACATGGGAAAAGTCTTCATCATACCCAGAATGATCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS GCA 90 bp GATTTTGATGCGTTCTATTTCCAATGGACAAGGCCCTGTGAAGTCTaGCATGGAGTACTGGCCAAGAGAAAGAAGGGCCTCTGTGCAGTG +
Preference number: 5 (lower is better)
Translates to: DFDAFYFQWTRPCEV*HGVLAKRKKGLCAV
Trigger: CACTGCACAGAGGCCCTTCTTTCTCTTGGCCAGTACTCCATGGCAGACTTCACAGGGCCTTGTCCATTGGAAATAGAACGCATCAAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579861.1
ENST00000579953.5
ENST00000580168.5
ENST00000580662.5
ENST00000580963.1
ENST00000581159.5
ENST00000584641.5
CDS-3UTR CAA 90 bp CTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGATGCTGCAGCACACTGTAACTGACAGGTCAGGATaGTGCTCTACCTTTACTCCT +
Preference number: 5 (lower is better)
Translates to: LLVRHKGWKLAKMLQHTVTDRSG*CSTFTP
Trigger: AGGAGTAAAGGTAGAGCACAATCCTGACCTGTCAGT...TACAGTGTGCTGCAGCATCTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp ATCCTCAGGGGGTTTGACAGTCTTGGGTGGCGCTATCAACTCTCTGGGCTGAGCAAAGCGACCAAAAAGTaGTCCATTCTGAGCATACTT +
Preference number: 5 (lower is better)
Translates to: ILRGFDSLGWRYQLSGLSKATKK*SILSIL
Trigger: AAGTATGCTCAGAATGGACAACTTTTTGGTCGCTTT...GCTCAGCCCAGAGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCCTGAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGGCCTCTAACTGGGCTTaGATCTGTTCAAAAGTGATT +
Preference number: 5 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKASNWA*ICSKVI
Trigger: AATCACTTTTGAACAGATCAAAGCCCAGTTAGAGGC...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGGTGAGGATCTATTCTTaGAACAGGGCTTGGAGATTT +
Preference number: 5 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKVRIYS*NRAWRF
Trigger: AAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCAC...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGTTGATGATTCTGTATTaGTACAAAAGGGTTCTGCGG +
Preference number: 5 (lower is better)
Translates to: QFLEERQRVATLLGLLRRLMILY*YKRVLR
Trigger: CCGCAGAACCCTTTTGTACAAATACAGAATCATCAA...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTCTGAGCCAGACTGTCTaGAGGAGTGCTTACTTCTTC +
Preference number: 5 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETLSQTV*RSAYFF
Trigger: GAAGAAGTAAGCACTCCTCAAGACAGTCTGGCTCAG...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGGGTCGCTACTCTTCTaGGCCTGCTCAGGAGGGGGC +
Preference number: 5 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPGSLLF*ACSGGG
Trigger: GCCCCCTCCTGAGCAGGCCAAGAAGAGTAGCGACCC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAAAGGCATCTTCTCCCTaGGCCAGTCCTTCTCCCAGC +
Preference number: 5 (lower is better)
Translates to: PKVGKFISFLSSSNASIKKASSP*ASPSPS
Trigger: GCTGGGAGAAGGACTGGCCAAGGGAGAAGATGCCTT...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp CTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGATGCTGCAGCACACTGTAAGCAGAGAGGGGAATTaGGTATCTGATAAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: LLVRHKGWKLAKMLQHTVSREGN*VSDKKA
Trigger: AGCCTTCTTATCAGATACCAAATTCCCCTCTCTGCT...TACAGTGTGCTGCAGCATCTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp ATTGGCCGACTCCGCGATCTGCTTGTTAGGCATAAGGGGTGGAAACTGGCCAAGTGCCAGAATCTGCAATaGCACTTTAAGGTTGAACTT +
Preference number: 5 (lower is better)
Translates to: IGRLRDLLVRHKGWKLAKCQNLQ*HFKVEL
Trigger: AAGTTCAACCTTAAAGTGCAATTGCAGATTCTGGCA...CTTGGCCAGTTTCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTCGGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAGGACTGTGGCCTTCTaGCAGCATGGGAGGGGGCTG +
Preference number: 5 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPRTVAF*QHGRGL
Trigger: CAGCCCCCTCCCATGCTGCAAGAAGGCCACAGTCCT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp CAGTTCCTGGAAGAGAGACAGAGGGTCGCTACTCTTCTTGGCCTGCTCAGGAGGGCTTCTACTCTGTACTaGTCTATATTGCAAAAGTCT +
Preference number: 5 (lower is better)
Translates to: QFLEERQRVATLLGLLRRASTLY*SILQKS
Trigger: AGACTTTTGCAATATAGACAAGTACAGAGTAGAAGC...CCTCCTGAGCAGGCCAAGAAGAGTAGCGACCCTCTGTCTCTCTTCCAGGAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTTGGGGGCTACTGCTATaGGCCGACTCCGCGATCTGC +
Preference number: 5 (lower is better)
Translates to: LLHIASTFMGFKESGQMTWGLLL*ADSAIC
Trigger: GCAGATCGCGGAGTCGGCCAATAGCAGTAGCCCCCA...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGCATGTGGATCAAGATaGACCCTAAGCACACCAAAC +
Preference number: 5 (lower is better)
Translates to: GLAASASPGNLLEMQIIRACGSR*TLSTPN
Trigger: GTTTGGTGTGCTTAGGGTCAATCTTGATCCACATGC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGCTGATTCAACTGACTTaGCTGCTGGACTACCTGATT +
Preference number: 5 (lower is better)
Translates to: GLAASASPGNLLEMQIIRLIQLT*LLDYLI
Trigger: AATCAGGTAGTCCAGCAGCAAAGTCAGTTGAATCAG...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAGGGGGTTTGACAGTCTaGGGTGGCGCTATCAACTCT +
Preference number: 5 (lower is better)
Translates to: PKVGKFISFLSSSNASIKGGLTV*GGAINS
Trigger: AGAGTTGATAGCGCCACCCAAGACTGTCAAACCCCC...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGACTGCGGAACTGGGTTaGGTATTTAACCACAGTTCA +
Preference number: 5 (lower is better)
Translates to: GLAASASPGNLLEMQIIRTAELG*VFNHSS
Trigger: TGAACTGTGGTTAAATACCAAACCCAGTTCCGCAGT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCTTGGTACCTGCTAGTCTCCTGTaGCTGCAGAATATGTTTGAC +
Preference number: 5 (lower is better)
Translates to: AADLTRCAAVELERVVLVPASLL*LQNMFD
Trigger: GTCAAACATATTCTGCAGCAACAGGAGACTAGCAGG...TACCAAGACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGCCTCTAACTGGGCTTaGATCTGTTCAAAAGTGATT +
Preference number: 5 (lower is better)
Translates to: GLAASASPGNLLEMQIIRASNWA*ICSKVI
Trigger: AATCACTTTTGAACAGATCAAAGCCCAGTTAGAGGC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GGACACCTCGAGGTTCTCCGACTTCAGTTGATCCTCAGGGGGTTTGACAGTCTTTATGCTCTAATAGGATaGCCAATAAGTACAGAAGGA +
Preference number: 5 (lower is better)
Translates to: GHLEVLRLQLILRGFDSLYALIG*PISTEG
Trigger: TCCTTCTGTACTTATTGGCAATCCTATTAGAGCATA...AAGACTGTCAAACCCCCTGAGGATCAACTGAAGTCGGAGAACCTCGAGGTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTAAGAATGGGGCCGGGTaGTGCAATGGCTCTCAGAGG +
Preference number: 5 (lower is better)
Translates to: LLHIASTFMGFKESGQMTKNGAG*CNGSQR
Trigger: CCTCTGAGAGCCATTGCACAACCCGGCCCCATTCTT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp ATATCTGGGGTGGGAGGCGCTGTGGAAATGCTGGGTTGCTGGCTACTTCAATGTTATATTGCAAAAGTCTaGATTGAGGTGGTGGCATTT +
Preference number: 5 (lower is better)
Translates to: ISGVGGAVEMLGCWLLQCYIAKV*IEVVAF
Trigger: AAATGCCACCACCTCAATCAAGACTTTTGCAATATA...ACATTGAAGTAGCCAGCAACCCAGCATTTCCACAGCGCCTCCCACCCCAGATAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGTCCGGGGATGAAAAGTaGAAAGAAGATTGGTTACTG +
Preference number: 5 (lower is better)
Translates to: GLAASASPGNLLEMQIIRSGDEK*KEDWLL
Trigger: CAGTAACCAATCTTCTTTCAACTTTTCATCCCCGGA...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTCTCTTGGCTGCTAGCTaGATGCAAACATATGTAACA +
Preference number: 5 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETLLAAS*MQTYVT
Trigger: TGTTACATATGTTTGCATCAAGCTAGCAGCCAAGAG...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGGACAAATTACTACCATaGAGGAGCTGGAGGGAAAAA +
Preference number: 5 (lower is better)
Translates to: GLAASASPGNLLEMQIIRDKLLP*RSWREK
Trigger: TTTTTCCCTCCAGCTCCTCAATGGTAGTAATTTGTC...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS GCA 90 bp GGGTATGATGAAGACTTTTCCCATGTCCACACTAAACAAGCTCCTTaGAGAAACCGCTTGCCGCCAAATGTAACCTTCAATTCCAACACT +
Preference number: 5 (lower is better)
Translates to: GYDEDFSHVHTKQAP*RNRLPPNVTFNSNT
Trigger: AGTGTTGGAATTGAAGGTTACATTTGGCGGCAAGCGGTTTCTGCAAGGAGCTTGTTTAGTGTGGACATGGGAAAAGTCTTCATCATACCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS GCA 90 bp AATTTCCACACCAAAAGATTCAAACTTAAGGTCCTGGATACAAACTaGCAAACAGCTCTCCAGATAGATCACACAAACTGGGCCAGGGGC +
Preference number: 5 (lower is better)
Translates to: NFHTKRFKLKVLDTN*QTALQIDHTNWARG
Trigger: GCCCCTGGCCCAGTTTGTGTGATCTATCTGGAGAGCTGTTTGGCAGTTTGTATCCAGGACCTTAAGTTTGAATCTTTTGGTGTGGAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578938.1
CDS CCA 90 bp AATTCTGTAGAGAAGACTCTCGATTTTGATGCGTTCTATTTCCAATaGACAAGGCCCTGTGAAGTCTGCCATGGAGTACTGGCCAAGAGA +
Preference number: 5 (lower is better)
Translates to: NSVEKTLDFDAFYFQ*TRPCEVCHGVLAKR
Trigger: TCTCTTGGCCAGTACTCCATGGCAGACTTCACAGGGCCTTGTCCATTGGAAATAGAACGCATCAAAATCGAGAGTCTTCTCTACAGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579861.1
ENST00000579953.5
ENST00000580168.5
ENST00000580662.5
ENST00000580963.1
ENST00000581159.5
ENST00000584641.5
CDS-3UTR CAA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTTGCCAGAATCTGCAATaGCACTTTAAGGTTGAACTT +
Preference number: 5 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETCQNLQ*HFKVEL
Trigger: AAGTTCAACCTTAAAGTGCAATTGCAGATTCTGGCA...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGAAAGCGACCAAAAAGTaGTCCATTCTGAGCATACTT +
Preference number: 5 (lower is better)
Translates to: GLAASASPGNLLEMQIIRKATKK*SILSIL
Trigger: AAGTATGCTCAGAATGGACAACTTTTTGGTCGCTTT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGACGTATTCTAAACACTaGATCAGCATATGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: GLAASASPGNLLEMQIIRTYSKH*ISIWSH
Trigger: GTGACTCCATATGCTGATCAAGTGTTTAGAATACGT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTGAGGTGGTATCTGATTaGGTTGTTCAGGCAAATTAT +
Preference number: 5 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETEVVSD*VVQANY
Trigger: ATAATTTGCCTGAACAACCAAATCAGATACCACCTC...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTTTAAGTCTTGAAACCTaGAGTATGTGGTCTCCACTT +
Preference number: 5 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETLSLET*SMWSPL
Trigger: AAGTGGAGACCACATACTCAAGGTTTCAAGACTTAA...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGTTGATGATTCTGTATTaGTACAAAAGGGTTCTGCGG +
Preference number: 5 (lower is better)
Translates to: GLAASASPGNLLEMQIIRLMILY*YKRVLR
Trigger: CCGCAGAACCCTTTTGTACAAATACAGAATCATCAA...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGAGTGGTGCTGTAACTaGCCGGCTCAGTTTTCCAGC +
Preference number: 5 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPEWCCN*PAQFSS
Trigger: GCTGGAAAACTGAGCCGGCAAGTTACAGCACCACTC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGAAGACACGCCTCATTTaGATGGAAACTTGCAATGAT +
Preference number: 5 (lower is better)
Translates to: GLAASASPGNLLEMQIIRKTRLI*METCND
Trigger: ATCATTGCAAGTTTCCATCAAAATGAGGCGTGTCTT...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATGTAATCCCAACACTTaGGGAGCCCGAGGCGGGCAG +
Preference number: 5 (lower is better)
Translates to: FYSCTINLLAASLMQTYVCNPNT*GARGGQ
Trigger: CTGCCCGCCTCGGGCTCCCAAAGTGTTGGGATTACA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAAAGCTCCCCTCTAAGTaGGGACTGCATAAAGGAACC +
Preference number: 5 (lower is better)
Translates to: PKVGKFISFLSSSNASIKKLPSK*GLHKGT
Trigger: GGTTCCTTTATGCAGTCCCAACTTAGAGGGGAGCTT...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAACTGACCACCTCAGTTTaGTACAGCTTCCCTCAGGAA +
Preference number: 5 (lower is better)
Translates to: PKVGKFISFLSSSNASIKLTTSV*YSFPQE
Trigger: TTCCTGAGGGAAGCTGTACAAAACTGAGGTGGTCAG...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp AGTGATCATTCTGGGTATGATGAAGACTTTTCCCATGTCCACACTAAACAAGCTCCTTGCAGAAACCGCTaGCCGCCAAATGTAACCTTC +
Preference number: 5 (lower is better)
Translates to: SDHSGYDEDFSHVHTKQAPCRNR*PPNVTF
Trigger: GAAGGTTACATTTGGCGGCAAGCGGTTTCTGCAAGG...AGCTTGTTTAGTGTGGACATGGGAAAAGTCTTCATCATACCCAGAATGATCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS TCA 90 bp AAGAATATCTTCTTTCTGGGGCATCTGAAAGGTGGAATGTGCGCTTaGGATCAAACAGTACTGATGCACAACTGGGTGGACAGTCTTTAC +
Preference number: 5 (lower is better)
Translates to: KNIFFLGHLKGGMCA*DQTVLMHNWVDSLY
Trigger: GTAAAGACTGTCCACCCAGTTGTGCATCAGTACTGTTTGATCTCAAGCGCACATTCCACCTTTCAGATGCCCCAGAAAGAAGATATTCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358691.10
ENST00000579953.5
ENST00000580168.5
CDS GCA 90 bp CTGAGCATACTTTGCACCTCCAGAAACACCAGTGAGCATGAAGCTTaGCAGAATCTGCAATTGCACTTTAAGGTTGAACTTGCTGATTTC +
Preference number: 5 (lower is better)
Translates to: LSILCTSRNTSEHEA*QNLQLHFKVELADF
Trigger: GAAATCAGCAAGTTCAACCTTAAAGTGCAATTGCAGATTCTGGCAAGCTTCATGCTCACTGGTGTTTCTGGAGGTGCAAAGTATGCTCAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000578783.1
ENST00000579953.5
ENST00000580168.5
CDS GCA 90 bp AGTAAGCTTAAAGCGACCAAAAAGTTGTCCATTCTGAGCATACTTTaGACCTCCAGAAACACCAGTGAGCATGAAGCTTGCCAGAATCTG +
Preference number: 5 (lower is better)
Translates to: SKLKATKKLSILSIL*TSRNTSEHEACQNL
Trigger: CAGATTCTGGCAAGCTTCATGCTCACTGGTGTTTCTGGAGGTGCAAAGTATGCTCAGAATGGACAACTTTTTGGTCGCTTTAAGCTTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
CDS-3UTR CAA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAACTGACAGGTCAGGATaGTGCTCTACCTTTACTCCT +
Preference number: 5 (lower is better)
Translates to: PKVGKFISFLSSSNASIKTDRSG*CSTFTP
Trigger: AGGAGTAAAGGTAGAGCACAATCCTGACCTGTCAGT...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTATCAATCATTACTCTTaGCATGAGTACTGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETINHYS*HEYWFQ
Trigger: TTGGAACCAGTACTCATGCAAAGAGTAATGATTGAT...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTCACAGCAACCAGGGATaGTGCTCTTGTGATGGCAGT +
Preference number: 5 (lower is better)
Translates to: LLHIASTFMGFKESGQMTHSNQG*CSCDGS
Trigger: ACTGCCATCACAAGAGCACAATCCCTGGTTGCTGTG...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAGATTGCTGCTGTTTGTaGGTACTTCCTGAATGCTGC +
Preference number: 5 (lower is better)
Translates to: PKVGKFISFLSSSNASIKDCCCL*VLPECC
Trigger: GCAGCATTCAGGAAGTACCAACAAACAGCAGCAATC...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GTGATTTTCAAAGTGTGGTTCCTGGACTGGCAGCATCAGCATCGCCTGGAAACTCAGGTCCGGAATTATTaGTATCACTTTTACCATTTC +
Preference number: 5 (lower is better)
Translates to: VIFKVWFLDWQHQHRLETQVRNY*YHFYHF
Trigger: GAAATGGTAAAAGTGATACAAATAATTCCGGACCTG...AGTTTCCAGGCGATGCTGATGCTGCCAGTCCAGGAACCACACTTTGAAAATCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GGACTGGCAGCATCAGCATCGCCTGGAAACTTGTTGGAAATGCAAATCATCAGGTATATTGCAAAAGTCTaGATTGAGGTGGTGGCATTT +
Preference number: 5 (lower is better)
Translates to: GLAASASPGNLLEMQIIRYIAKV*IEVVAF
Trigger: AAATGCCACCACCTCAATCAAGACTTTTGCAATATA...CCTGATGATTTGCATTTCCAACAAGTTTCCAGGCGATGCTGATGCTGCCAGTCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp TTCTGTTGCAAGTTAGCAAAAGTCCATGCTCCATCAGGTGCCAGGTATTTCAAGTTACTAGCTGCTGTTTaGCATGCATCAGGTATTCGA +
Preference number: 5 (lower is better)
Translates to: FCCKLAKVHAPSGARYFKLLAAV*HASGIR
Trigger: TCGAATACCTGATGCATGCAAAACAGCAGCTAGTAA...CTTGAAATACCTGGCACCTGATGGAGCATGGACTTTTGCTAACTTGCAACAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAACAGCCTCTTTCTGTTTaGCATTTAGTCGAGGATCCA +
Preference number: 5 (lower is better)
Translates to: PKVGKFISFLSSSNASIKQPLSV*HLVEDP
Trigger: TGGATCCTCGACTAAATGCAAAACAGAAAGAGGCTG...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp AATACTTGTCCCAGTGTGAGGATCTATTCTTTGAACAGGGCTTGGAGATTTTCCCAGCCTCTTTCTGTTTaGCATTTAGTCGAGGATCCA +
Preference number: 5 (lower is better)
Translates to: NTCPSVRIYSLNRAWRFSQPLSV*HLVEDP
Trigger: TGGATCCTCGACTAAATGCAAAACAGAAAGAGGCTG...GGAAAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCACACTGGGACAAGTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGAGATTTTCCCAAATTaGGGTGAGGTCCAAGAGGGG +
Preference number: 5 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPEIFPN*GEVQEG
Trigger: CCCCTCTTGGACCTCACCCAAATTTGGGAAAATCTC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp TATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCTTCTTTGAACAGGGCTaGGAGATTTTCCCAAATTTG +
Preference number: 5 (lower is better)
Translates to: YSAADLTRCAAVELERVVFFEQG*EIFPNL
Trigger: CAAATTTGGGAAAATCTCCAAGCCCTGTTCAAAGAA...GACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp TATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGGTGGTCTTTATGTGTCTTGGGTaGAGATTATCTTTGCGAGGA +
Preference number: 5 (lower is better)
Translates to: YSAADLTRCAAVELERVVFMCLG*RLSLRG
Trigger: TCCTCGCAAAGATAATCTCAACCCAAGACACATAAA...GACCACCCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGCTGGACTACCTGATTaGGCTGAGGTGGTATCTGAT +
Preference number: 5 (lower is better)
Translates to: LLHIASTFMGFKESGQMTAGLPD*AEVVSD
Trigger: ATCAGATACCACCTCAGCCAAATCAGGTAGTCCAGC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTAACGAGAAAGGTGAGTaGAATATCTGGGGTGGGAGG +
Preference number: 5 (lower is better)
Translates to: LLHIASTFMGFKESGQMTNEKGE*NIWGGR
Trigger: CCTCCCACCCCAGATATTCAACTCACCTTTCTCGTT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGACTCCGCGATCTGCTaGTTAGGCATAAGGGGTGGA +
Preference number: 5 (lower is better)
Translates to: FYSCTINLLAASLMQTYVDSAIC*LGIRGG
Trigger: TCCACCCCTTATGCCTAACAAGCAGATCGCGGAGTC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS TCA 90 bp CATCTTTCCTCCTATCCATTCTTGACAGTTTTCTGGGACTTCTTGTaGTACCTGGGTAGTACTATCTCCGGCAGATATTGCAATGATACT +
Preference number: 5 (lower is better)
Translates to: HLSSYPFLTVFWDFL*YLGSTISGRYCNDT
Trigger: AGTATCATTGCAATATCTGCCGGAGATAGTACTACCCAGGTATCACAAGAAGTCCCAGAAAACTGTCAAGAATGGATAGGAGGAAAGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
ENST00000582864.1
CDS TCA 90 bp GAAAGTGTTTCAGTAAGCTTAAAGCGACCAAAAAGTTGTCCATTCTaGGCATACTTTGCACCTCCAGAAACACCAGTGAGCATGAAGCTT +
Preference number: 5 (lower is better)
Translates to: ESVSVSLKRPKSCPF*AYFAPPETPVSMKL
Trigger: AAGCTTCATGCTCACTGGTGTTTCTGGAGGTGCAAAGTATGCTCAGAATGGACAACTTTTTGGTCGCTTTAAGCTTACTGAAACACTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
CDS GCA 90 bp ATAGTCTTAGAGGAAGAATCCCAACGTTTAGCTGTGGTTACTAGCTaGTGTTTTGCATGCATCAGGTATTCGAGATCTTCTGTAGAAGCT +
Preference number: 5 (lower is better)
Translates to: IVLEEESQRLAVVTS*CFACIRYSRSSVEA
Trigger: AGCTTCTACAGAAGATCTCGAATACCTGATGCATGCAAAACAGCAGCTAGTAACCACAGCTAAACGTTGGGATTCTTCCTCTAAGACTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000578938.1
ENST00000579953.5
ENST00000580168.5
CDS GCA 90 bp TTTGCACCTCCAGAAACACCAGTGAGCATGAAGCTTGCCAGAATCTaGAATTGCACTTTAAGGTTGAACTTGCTGATTTCTTTATACTGG +
Preference number: 5 (lower is better)
Translates to: FAPPETPVSMKLARI*NCTLRLNLLISLYW
Trigger: CCAGTATAAAGAAATCAGCAAGTTCAACCTTAAAGTGCAATTGCAGATTCTGGCAAGCTTCATGCTCACTGGTGTTTCTGGAGGTGCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000578783.1
ENST00000579953.5
ENST00000580168.5
CDS-3UTR CAA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTACTTTCTACGCCATCTaGGATCCACTTGTCAACGTC +
Preference number: 5 (lower is better)
Translates to: LLHIASTFMGFKESGQMTTFYAI*DPLVNV
Trigger: GACGTTGACAAGTGGATCCAAGATGGCGTAGAAAGT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCACATTCTGAGCATACTTaGCACCTCCAGAAACACCAG +
Preference number: 5 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPHSEHT*HLQKHQ
Trigger: CTGGTGTTTCTGGAGGTGCAAAGTATGCTCAGAATG...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp TGGGTGAAATGGCTCTTGACCAATAGCATGTTGATGATTCTGTATTTGTACAAAGAGATTTTCCCAAATTaGGGTGAGGTCCAAGAGGGG +
Preference number: 5 (lower is better)
Translates to: WVKWLLTNSMLMILYLYKEIFPN*GEVQEG
Trigger: CCCCTCTTGGACCTCACCCAAATTTGGGAAAATCTC...TTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGAGCCATTTCACCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp AGTGATCATTCTGGGTATGATGAAGACTTTTCCCATGTCCACACTAAACAAGCTTGCACAATTAACCTCTaGGCTGCTAGCTTGATGCAA +
Preference number: 5 (lower is better)
Translates to: SDHSGYDEDFSHVHTKQACTINL*AASLMQ
Trigger: TTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCA...AGCTTGTTTAGTGTGGACATGGGAAAAGTCTTCATCATACCCAGAATGATCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTCGCTTATCCTGGAGCTaGCTAACCATTAACCAAAGG +
Preference number: 5 (lower is better)
Translates to: LLHIASTFMGFKESGQMTRLSWS*LTINQR
Trigger: CCTTTGGTTAATGGTTAGCAAGCTCCAGGATAAGCG...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp TGGGTGAAATGGCTCTTGACCAATAGCATGTTGATGATTCTGTATTTGTACAAAAACAGAGGCTTTACCTaGGGTGGTGATTGCTGCTGT +
Preference number: 5 (lower is better)
Translates to: WVKWLLTNSMLMILYLYKNRGFT*GGDCCC
Trigger: ACAGCAGCAATCACCACCCAAGGTAAAGCCTCTGTT...TTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGAGCCATTTCACCCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS CCA 90 bp ACCTTCTGTAGAAGCTGCATCAATCATTACTCTTTGCATGAGTACTaGTTCCAATCCAAAGTCGAAAACTATGGTTTGGCGAAAAGTTCC +
Preference number: 5 (lower is better)
Translates to: TFCRSCINHYSLHEY*FQSKVENYGLAKSS
Trigger: GGAACTTTTCGCCAAACCATAGTTTTCGACTTTGGATTGGAACCAGTACTCATGCAAAGAGTAATGATTGATGCAGCTTCTACAGAAGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582864.1
CDS-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAAATGGTGGATACAGGTaGGAGCTTCCCTTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: FYSCTINLLAASLMQTYVNGGYR*ELPFQL
Trigger: CAGCTGAAAGGGAAGCTCCAACCTGTATCCACCATT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CAA 90 bp GCAAATTATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGTTAAGTCTTGAAACCTaGAGTATGTGGTCTCCACTT +
Preference number: 5 (lower is better)
Translates to: ANYSAADLTRCAAVELERLSLET*SMWSPL
Trigger: AAGTGGAGACCACATACTCAAGGTTTCAAGACTTAA...CCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATAATTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGGATCATCAGGAAGATaGGGTTCATTCGAAAGGTTC +
Preference number: 5 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPGSSGR*GSFERF
Trigger: GAACCTTTCGAATGAACCCAATCTTCCTGATGATCC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS TCA 90 bp ATGCTTACTAGACAGATTGAGTCAAACTCTTCCAAACGGATCCACTaGAATGGCCTTACCTCTGTTTCTGAGAGAAGTGTTTTTAGTCTT +
Preference number: 5 (lower is better)
Translates to: MLTRQIESNSSKRIH*NGLTSVSERSVFSL
Trigger: AAGACTAAAAACACTTCTCTCAGAAACAGAGGTAAGGCCATTTCAGTGGATCCGTTTGGAAGAGTTTGACTCAATCTGTCTAGTAAGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584641.5
CDS GCA 90 bp AGGTATTCGAGATCTTCTGTAGAAGCTGCATCAATCATTACTCTTTaGATGAGTACTGGTTCCAATCCAAAGTCGAAAACTATGGTTTGG +
Preference number: 5 (lower is better)
Translates to: RYSRSSVEAASIITL*MSTGSNPKSKTMVW
Trigger: CCAAACCATAGTTTTCGACTTTGGATTGGAACCAGTACTCATGCAAAGAGTAATGATTGATGCAGCTTCTACAGAAGATCTCGAATACCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
CDS CCA 90 bp ATCTTCTGTAGAAGCTGCATCAATCATTACTCTTTGCATGAGTACTaGTTCCAATCCAAAGTCGAAAACTATGGTTTGGCGAAAAGTTCC +
Preference number: 5 (lower is better)
Translates to: IFCRSCINHYSLHEY*FQSKVENYGLAKSS
Trigger: GGAACTTTTCGCCAAACCATAGTTTTCGACTTTGGATTGGAACCAGTACTCATGCAAAGAGTAATGATTGATGCAGCTTCTACAGAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
CDS-3UTR CAA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAAAGAAGACTCTCGATTTaGATGCGTTCTATTTCCAAT +
Preference number: 5 (lower is better)
Translates to: PKVGKFISFLSSSNASIKRRLSI*MRSISN
Trigger: ATTGGAAATAGAACGCATCAAAATCGAGAGTCTTCT...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp AATACTTGTCCCAGTGTGAGGATCTATTCTTTGAACAGGGCTTGGAGATTTTCCAGAAGACTCTCGATTTaGATGCGTTCTATTTCCAAT +
Preference number: 5 (lower is better)
Translates to: NTCPSVRIYSLNRAWRFSRRLSI*MRSISN
Trigger: ATTGGAAATAGAACGCATCAAAATCGAGAGTCTTCT...GGAAAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCACACTGGGACAAGTATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGTCTGGTGGGATTTTTaGGTGCTGACAGTAACTGAC +
Preference number: 5 (lower is better)
Translates to: FYSCTINLLAASLMQTYVVWWDF*VLTVTD
Trigger: GTCAGTTACTGTCAGCACCAAAAAATCCCACCAGAC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CAA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTTTACTAGCTGCTGTTTaGCATGCATCAGGTATTCGA +
Preference number: 5 (lower is better)
Translates to: LLHIASTFMGFKESGQMTLLAAV*HASGIR
Trigger: TCGAATACCTGATGCATGCAAAACAGCAGCTAGTAA...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTAATCCTAGTCTCCTGTaGCTGCAGAATATGTTTGAC +
Preference number: 5 (lower is better)
Translates to: LLHIASTFMGFKESGQMTNPSLL*LQNMFD
Trigger: GTCAAACATATTCTGCAGCAACAGGAGACTAGGATT...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGTGAGGATCTATTCTTaGAACAGGGCTTGGAGATTT +
Preference number: 5 (lower is better)
Translates to: LLHIASTFMGFKESGQMTVRIYS*NRAWRF
Trigger: AAATCTCCAAGCCCTGTTCAAAGAATAGATCCTCAC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAATTCTGTTCTGTGGATTaGATTCCAAATCAACCTGTT +
Preference number: 5 (lower is better)
Translates to: PKVGKFISFLSSSNASIKFCSVD*IPNQPV
Trigger: AACAGGTTGATTTGGAATCAAATCCACAGAACAGAA...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp GCAAATTATTCTGCTGCTGATTTAACAAGGTGTGCTGCTGTGGAATTGGAAAGGTTCTGTTCTGTGGATTaGATTCCAAATCAACCTGTT +
Preference number: 5 (lower is better)
Translates to: ANYSAADLTRCAAVELERFCSVD*IPNQPV
Trigger: AACAGGTTGATTTGGAATCAAATCCACAGAACAGAA...CCTTTCCAATTCCACAGCAGCACACCTTGTTAAATCAGCAGCAGAATAATTTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp CCCAAAGTTGGGAAATTCATTAGCTTTCTCAGCAGCTCCAATGCCTCCATAAAATCCAAAAACCTGTTTTaGAATGGATCATCAGGAAGA +
Preference number: 5 (lower is better)
Translates to: PKVGKFISFLSSSNASIKSKNLF*NGSSGR
Trigger: TCTTCCTGATGATCCATTCAAAAACAGGTTTTTGGA...TTTTATGGAGGCATTGGAGCTGCTGAGAAAGCTAATGAATTTCCCAACTTTGGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS GCA 90 bp TATTGCAATGATACTAAAATGAGGACGATGAGCATCATAAAGCAATaGTACACGATACAGCATTCTTGCAGGCTTACAAGTGAGAGCAAA +
Preference number: 5 (lower is better)
Translates to: YCNDTKMRTMSIIKQ*YTIQHSCRLTSESK
Trigger: TTTGCTCTCACTTGTAAGCCTGCAAGAATGCTGTATCGTGTAGCATTGCTTTATGATGCTCATCGTCCTCATTTTAGTATCATTGCAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
ENST00000582864.1
CDS CCA 90 bp AGCGGATTCAACACATATGTCTTCTTTAGTTCTAAAGCCTCTAACTaGGCTTTGATCTGTTCAAAAGTGATTCCATGTAGGCTACTGTTT +
Preference number: 5 (lower is better)
Translates to: SGFNTYVFFSSKASN*ALICSKVIPCRLLF
Trigger: AAACAGTAGCCTACATGGAATCACTTTTGAACAGATCAAAGCCCAGTTAGAGGCTTTAGAACTAAAGAAGACATATGTGTTGAATCCGCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358691.10
ENST00000579953.5
ENST00000580168.5
CDS-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAAGCAGAGAGGGGAATTaGGTATCTGATAAGAAGGCT +
Preference number: 5 (lower is better)
Translates to: FYSCTINLLAASLMQTYVSREGN*VSDKKA
Trigger: AGCCTTCTTATCAGATACCAAATTCCCCTCTCTGCT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAAGGTGGAATGTGCGCTaGAGATCAAACAGTACTGAT +
Preference number: 5 (lower is better)
Translates to: FYSCTINLLAASLMQTYVRWNVR*RSNSTD
Trigger: ATCAGTACTGTTTGATCTCAAGCGCACATTCCACCT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CAA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCATTTATGTGTCTTGGGTaGAGATTATCTTTGCGAGGA +
Preference number: 5 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPFMCLG*RLSLRG
Trigger: TCCTCGCAAAGATAATCTCAACCCAAGACACATAAA...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATTCCCGTGTTTCACTTaGATCACGATGAGACAGTTC +
Preference number: 5 (lower is better)
Translates to: FYSCTINLLAASLMQTYVFPCFT*ITMRQF
Trigger: GAACTGTCTCATCGTGATCAAAGTGAAACACGGGAA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATGGGTGAAATGGCTCTaGACCAATAGCATGTTGATG +
Preference number: 5 (lower is better)
Translates to: FYSCTINLLAASLMQTYVWVKWL*TNSMLM
Trigger: CATCAACATGCTATTGGTCAAGAGCCATTTCACCCA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CAA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAAAAGTTGAAAGAAGATaGGTTACTGTGGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPKVERR*VTVVLK
Trigger: CTTCAGGACCACAGTAACCAATCTTCTTTCAACTTT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATGCACAATTAACCTCTaGGCTGCTAGCTTGATGCAA +
Preference number: 5 (lower is better)
Translates to: FYSCTINLLAASLMQTYVCTINL*AASLMQ
Trigger: TTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGCATCGCCTGGAAACTaGTTGGAAATGCAAATCATC +
Preference number: 5 (lower is better)
Translates to: FYSCTINLLAASLMQTYVASPGN*LEMQII
Trigger: GATGATTTGCATTTCCAACAAGTTTCCAGGCGATGC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAACTGTAGACCCCAAGTaGAAAACTTGTTCTATGGAA +
Preference number: 5 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPTVDPK*KTCSME
Trigger: TTCCATAGAACAAGTTTTCAACTTGGGGTCTACAGT...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp TGGGTGAAATGGCTCTTGACCAATAGCATGTTGATGATTCTGTATTTGTACAAACATCCCAATAAACCTTaGGCACTTCTGCGAAGTTTT +
Preference number: 5 (lower is better)
Translates to: WVKWLLTNSMLMILYLYKHPNKP*ALLRSF
Trigger: AAAACTTCGCAGAAGTGCCAAAGGTTTATTGGGATG...TTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGAGCCATTTCACCCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS TCA 90 bp TTGCAAGACATGTGTCCAGACATCTTTGACTCTGATTATTGCTTATaGTCCCCCATATGTGGAATTTCCACACCAAAAGATTCAAACTTA +
Preference number: 5 (lower is better)
Translates to: LQDMCPDIFDSDYCL*SPICGISTPKDSNL
Trigger: TAAGTTTGAATCTTTTGGTGTGGAAATTCCACATATGGGGGATCATAAGCAATAATCAGAGTCAAAGATGTCTGGACACATGTCTTGCAA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578938.1
CDS-3UTR CAA 90 bp ACCTTTCTCCACAAATGTTCCAGTCATGGCACCAGATTTATAAAAATGTCTCCAGTCGAAAACTATGGTTaGGCGAAAAGTTCCAAATAT +
Preference number: 5 (lower is better)
Translates to: TFLHKCSSHGTRFIKMSPVENYG*AKSSKY
Trigger: ATATTTGGAACTTTTCGCCAAACCATAGTTTTCGAC...TGGAGACATTTTTATAAATCTGGTGCCATGACTGGAACATTTGTGGAGAAAGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp TGGGTGAAATGGCTCTTGACCAATAGCATGTTGATGATTCTGTATTTGTACAAAACGTATTCTAAACACTaGATCAGCATATGGAGTCAC +
Preference number: 5 (lower is better)
Translates to: WVKWLLTNSMLMILYLYKTYSKH*ISIWSH
Trigger: GTGACTCCATATGCTGATCAAGTGTTTAGAATACGT...TTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGAGCCATTTCACCCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGGGTTGAGATTATCTTaGCGAGGAAATTTGGTACTG +
Preference number: 5 (lower is better)
Translates to: FYSCTINLLAASLMQTYVGLRLS*RGNLVL
Trigger: CAGTACCAAATTTCCTCGCAAAGATAATCTCAACCC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CAA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTGCTTCTACTCTGTACTaGTCTATATTGCAAAAGTCT +
Preference number: 5 (lower is better)
Translates to: LLHIASTFMGFKESGQMTASTLY*SILQKS
Trigger: AGACTTTTGCAATATAGACAAGTACAGAGTAGAAGC...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp TGGGTGAAATGGCTCTTGACCAATAGCATGTTGATGATTCTGTATTTGTACAAAAAAGTTGAAAGAAGATaGGTTACTGTGGTCCTGAAG +
Preference number: 5 (lower is better)
Translates to: WVKWLLTNSMLMILYLYKKVERR*VTVVLK
Trigger: CTTCAGGACCACAGTAACCAATCTTCTTTCAACTTT...TTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGAGCCATTTCACCCA
38% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp CTACTACATATAGCCAGTACCTTTATGGGGTTTAAAGAATCAGGTCAGATGACTTTCTGCTATAACAATTaGGCAAAGCATATGCCCAAA +
Preference number: 5 (lower is better)
Translates to: LLHIASTFMGFKESGQMTFCYNN*AKHMPK
Trigger: TTTGGGCATATGCTTTGCCAAATTGTTATAGCAGAA...AGTCATCTGACCTGATTCTTTAAACCCCATAAAGGTACTGGCTATATGTAGTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp TGGGTGAAATGGCTCTTGACCAATAGCATGTTGATGATTCTGTATTTGTACAAAATCAATCATTACTCTTaGCATGAGTACTGGTTCCAA +
Preference number: 5 (lower is better)
Translates to: WVKWLLTNSMLMILYLYKINHYS*HEYWFQ
Trigger: TTGGAACCAGTACTCATGCAAAGAGTAATGATTGAT...TTTGTACAAATACAGAATCATCAACATGCTATTGGTCAAGAGCCATTTCACCCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATTCTTTGAACAGGGCTaGGAGATTTTCCCAAATTTG +
Preference number: 5 (lower is better)
Translates to: FYSCTINLLAASLMQTYVFFEQG*EIFPNL
Trigger: CAAATTTGGGAAAATCTCCAAGCCCTGTTCAAAGAA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAACTGAAAGCCCTGACTaGACAATTCTGTCTTCATAT +
Preference number: 5 (lower is better)
Translates to: FYSCTINLLAASLMQTYVTESPD*TILSSY
Trigger: ATATGAAGACAGAATTGTCAAGTCAGGGCTTTCAGT...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTATATGCTCTAATAGGATaGCCAATAAGTACAGAAGGA +
Preference number: 5 (lower is better)
Translates to: FYSCTINLLAASLMQTYVYALIG*PISTEG
Trigger: TCCTTCTGTACTTATTGGCAATCCTATTAGAGCATA...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000579953.5
CDS-3UTR CAA 90 bp TTTTATAGTTGCACAATTAACCTCTTGGCTGCTAGCTTGATGCAAACATATGTAGAACATTTATCTAGCTaGCGTTGTAGTCCTGTATAT +
Preference number: 5 (lower is better)
Translates to: FYSCTINLLAASLMQTYVEHLSS*RCSPVY
Trigger: ATATACAGGACTACAACGCAAGCTAGATAAATGTTC...TACATATGTTTGCATCAAGCTAGCAGCCAAGAGGTTAATTGTGCAACTATAAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000358691.10
CDS CCA 72 bp GGAGAAGCAGCATTCCCACGATGGGACTGTGGGTTATaGGGGTTACGAGGGAAGGCTGGCAGTCCCACTGCC +
Preference number: 6 (lower is better)
Translates to: GEAAFPRWDCGL*GLRGKAGSPTA
Trigger: GGCAGTGGGACTGCCAGCCTTCCCTCGTAACCCCCATAACCCACAGTCCCATCGTGGGAATGCTGCTTCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584641.5
CDS CCA 72 bp GACATGTGGAGAAGCAGCATTCCCACGATGGGACTGTaGGTTATGGGGGTTACGAGGGAAGGCTGGCAGTCC +
Preference number: 6 (lower is better)
Translates to: DMWRSSIPTMGL*VMGVTREGWQS
Trigger: GGACTGCCAGCCTTCCCTCGTAACCCCCATAACCCACAGTCCCATCGTGGGAATGCTGCTTCTCCACATGTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584641.5
CDS GCA 72 bp TTGGAGCTTCCCTTTCAGCTGCATGCAGCAAAGCACTaGCCGAAAGGCATCTTCTCCCTTGGCCAGTCCTTC +
Preference number: 6 (lower is better)
Translates to: LELPFQLHAAKH*PKGIFSLGQSF
Trigger: GAAGGACTGGCCAAGGGAGAAGATGCCTTTCGGGCAGTGCTTTGCTGCATGCAGCTGAAAGGGAAGCTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
ENST00000580662.5
ENST00000584641.5
CDS CCA 72 bp ACAGAGGAGACATGTGGAGAAGCAGCATTCCCACGATaGGACTGTGGGTTATGGGGGTTACGAGGGAAGGCT +
Preference number: 6 (lower is better)
Translates to: TEETCGEAAFPR*DCGLWGLRGKA
Trigger: AGCCTTCCCTCGTAACCCCCATAACCCACAGTCCCATCGTGGGAATGCTGCTTCTCCACATGTCTCCTCTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584641.5
CDS GCA 72 bp TGGTGGATACAGGTTGGAGCTTCCCTTTCAGCTGCATaGAGCAAAGCACTGCCCGAAAGGCATCTTCTCCCT +
Preference number: 6 (lower is better)
Translates to: WWIQVGASLSAA*SKALPERHLLP
Trigger: AGGGAGAAGATGCCTTTCGGGCAGTGCTTTGCTGCATGCAGCTGAAAGGGAAGCTCCAACCTGTATCCACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
ENST00000580662.5
ENST00000584641.5
CDS CCA 72 bp AATGGACAAGGCCCTGTGAAGTCTGCCATGGAGTACTaGCCAAGAGAAAGAAGGGCCTCTGTGCAGTGCTTG +
Preference number: 6 (lower is better)
Translates to: NGQGPVKSAMEY*PRERRASVQCL
Trigger: CAAGCACTGCACAGAGGCCCTTCTTTCTCTTGGCCAGTACTCCATGGCAGACTTCACAGGGCCTTGTCCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579861.1
ENST00000579953.5
ENST00000580168.5
ENST00000580662.5
ENST00000580963.1
ENST00000581159.5
ENST00000584641.5
CDS GCA 72 bp GCGTTCTATTTCCAATGGACAAGGCCCTGTGAAGTCTaGCATGGAGTACTGGCCAAGAGAAAGAAGGGCCTC +
Preference number: 6 (lower is better)
Translates to: AFYFQWTRPCEV*HGVLAKRKKGL
Trigger: GAGGCCCTTCTTTCTCTTGGCCAGTACTCCATGGCAGACTTCACAGGGCCTTGTCCATTGGAAATAGAACGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579861.1
ENST00000579953.5
ENST00000580168.5
ENST00000580662.5
ENST00000580963.1
ENST00000581159.5
ENST00000584641.5
CDS GCA 72 bp TCGCTGCTTGTGATTCCCCTAGGTGGTGGGCGGAAATaGCAACCATTACAAGACCCCTCATCTAAGTCTTCC +
Preference number: 6 (lower is better)
Translates to: SLLVIPLGGGRK*QPLQDPSSKSS
Trigger: GGAAGACTTAGATGAGGGGTCTTGTAATGGTTGGCATTTCCGCCCACCACCTAGGGGAATCACAAGCAGCGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
CDS GCA 72 bp ATAGGGTCCGATGATAAGCACAGGCGGCAGCTGGATTaGAAGTGGAGTGGTAATGGCCAGAACAGCCTCTTT +
Preference number: 6 (lower is better)
Translates to: IGSDDKHRRQLD*KWSGNGQNSLF
Trigger: AAAGAGGCTGTTCTGGCCATTACCACTCCACTTGCAATCCAGCTGCCGCCTGTGCTTATCATCGGACCCTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358691.10
ENST00000579953.5
ENST00000580168.5
CDS CCA 72 bp GACTTTTCCCCTTGGGTGGTGATTGCTGCTGTTTGTTaGTACTTCCTGAATGCTGCAGTCTTAGAGCCCGGG +
Preference number: 6 (lower is better)
Translates to: DFSPWVVIAAVC*YFLNAAVLEPG
Trigger: CCCGGGCTCTAAGACTGCAGCATTCAGGAAGTACCAACAAACAGCAGCAATCACCACCCAAGGGGAAAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000580168.5
CDS GCA 72 bp GGTGATTGCTGCTGTTTGTTGGTACTTCCTGAATGCTaGAGTCTTAGAGCCCGGGGGATAAATTCAGGTGCC +
Preference number: 6 (lower is better)
Translates to: GDCCCLLVLPEC*SLRARGINSGA
Trigger: GGCACCTGAATTTATCCCCCGGGCTCTAAGACTGCAGCATTCAGGAAGTACCAACAAACAGCAGCAATCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358691.10
ENST00000579953.5
ENST00000580168.5
CDS CCA 72 bp CCTGTGAGTGACTTGGCAAGAATGGTGGATACAGGTTaGAGCTTCCCTTTCAGCTGCATGCAGCAAAGCACT +
Preference number: 6 (lower is better)
Translates to: PVSDLARMVDTG*SFPFSCMQQST
Trigger: AGTGCTTTGCTGCATGCAGCTGAAAGGGAAGCTCCAACCTGTATCCACCATTCTTGCCAAGTCACTCACAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
ENST00000580662.5
ENST00000584641.5
CDS CCA 72 bp AGTATATTCCTCGCTGCTTGTGATTCCCCTAGGTGGTaGGCGGAAATGCCAACCATTACAAGACCCCTCATC +
Preference number: 6 (lower is better)
Translates to: SIFLAACDSPRW*AEMPTITRPLI
Trigger: GATGAGGGGTCTTGTAATGGTTGGCATTTCCGCCCACCACCTAGGGGAATCACAAGCAGCGAGGAATATACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
CDS CCA 72 bp CAAAGTATATTCCTCGCTGCTTGTGATTCCCCTAGGTaGTGGGCGGAAATGCCAACCATTACAAGACCCCTC +
Preference number: 6 (lower is better)
Translates to: QSIFLAACDSPR*WAEMPTITRPL
Trigger: GAGGGGTCTTGTAATGGTTGGCATTTCCGCCCACCACCTAGGGGAATCACAAGCAGCGAGGAATATACTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
CDS CCA 72 bp ATGGGAGCGGTAGTTCTCACACAGGAGAATCCTACATaGGAACTCAGCAGGGTAATGCTCATAGAGTCGGTC +
Preference number: 6 (lower is better)
Translates to: MGAVVLTQENPT*ELSRVMLIESV
Trigger: GACCGACTCTATGAGCATTACCCTGCTGAGTTCCCATGTAGGATTCTCCTGTGTGAGAACTACCGCTCCCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358691.10
ENST00000579953.5
ENST00000580168.5
CDS CCA 72 bp GTGGGTAGAAATCTTTGTGTGCTGGCTGCTTCCCACTaGCCATCAGTTTGCCCTCATAGAAAAGCTCAGAGG +
Preference number: 6 (lower is better)
Translates to: VGRNLCVLAASH*PSVCPHRKAQR
Trigger: CCTCTGAGCTTTTCTATGAGGGCAAACTGATGGCCAGTGGGAAGCAGCCAGCACACAAAGATTTCTACCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358691.10
ENST00000579953.5
ENST00000580168.5
CDS CAA 72 bp AGACTTTTCCCCTTGGGTGGTGATTGCTGCTGTTTGTaGGTACTTCCTGAATGCTGCAGTCTTAGAGCCCGG +
Preference number: 6 (lower is better)
Translates to: RLFPLGGDCCCL*VLPECCSLRAR
Trigger: CCGGGCTCTAAGACTGCAGCATTCAGGAAGTACCAACAAACAGCAGCAATCACCACCCAAGGGGAAAAGTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000358691.10
ENST00000580168.5
CDS CAA 72 bp AGAGGCTTTACCTTGGGTGGTGATTGCTGCTGTTTGTaGGTACTTCCTGAATGCTGCAGTCTTAGAGCCCGG +
Preference number: 6 (lower is better)
Translates to: RGFTLGGDCCCL*VLPECCSLRAR
Trigger: CCGGGCTCTAAGACTGCAGCATTCAGGAAGTACCAACAAACAGCAGCAATCACCACCCAAGGTAAAGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS GCA 72 bp GGTGGTGATTGCTGCTGTTTGTTGGTACTTCCTGAATaGTGCAGTCTTAGAGCCCGGGGGATAAATTCAGGT +
Preference number: 6 (lower is better)
Translates to: GGDCCCLLVLPE*CSLRARGINSG
Trigger: ACCTGAATTTATCCCCCGGGCTCTAAGACTGCAGCATTCAGGAAGTACCAACAAACAGCAGCAATCACCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000358691.10
ENST00000579953.5
ENST00000580168.5
CDS CAA 90 bp AAATCCTTTGTTACCATCCCATTCAGGGACTCTCCTGTGAGTGACTaGGCAAGAATGGTGGATACAGGTTGGAGCTTCCCTTTCAGCTGC +
Preference number: 6 (lower is better)
Translates to: KSFVTIPFRDSPVSD*ARMVDTGWSFPFSC
Trigger: GCAGCTGAAAGGGAAGCTCCAACCTGTATCCACCATTCTTGCCAAGTCACTCACAGGAGAGTCCCTGAATGGGATGGTAACAAAGGATTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
ENST00000580662.5
ENST00000584641.5
CDS TCA 72 bp CTTTGTTACCATCCCATTCAGGGACTCTCCTGTGAGTaGCTTGGCAAGAATGGTGGATACAGGTTGGAGCTT +
Preference number: 6 (lower is better)
Translates to: LCYHPIQGLSCE*LGKNGGYRLEL
Trigger: AAGCTCCAACCTGTATCCACCATTCTTGCCAAGTCACTCACAGGAGAGTCCCTGAATGGGATGGTAACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
ENST00000580662.5
ENST00000584641.5
CDS TCA 72 bp TTCTTTCTGGGGCATCTGAAAGGTGGAATGTGCGCTTaGGATCAAACAGTACTGATGCACAACTGGGTGGAC +
Preference number: 6 (lower is better)
Translates to: FFLGHLKGGMCA*DQTVLMHNWVD
Trigger: GTCCACCCAGTTGTGCATCAGTACTGTTTGATCTCAAGCGCACATTCCACCTTTCAGATGCCCCAGAAAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358691.10
ENST00000579953.5
ENST00000580168.5
CDS CAA 72 bp CTTCTTTCTGGGGCATCTGAAAGGTGGAATGTGCGCTaGAGATCAAACAGTACTGATGCACAACTGGGTGGA +
Preference number: 6 (lower is better)
Translates to: LLSGASERWNVR*RSNSTDAQLGG
Trigger: TCCACCCAGTTGTGCATCAGTACTGTTTGATCTCAAGCGCACATTCCACCTTTCAGATGCCCCAGAAAGAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358691.10
ENST00000579953.5
ENST00000580168.5
CDS CAA 72 bp AACAGAGGCTTTACCTTGGGTGGTGATTGCTGCTGTTaGTTGGTACTTCCTGAATGCTGCAGTCTTAGAGCC +
Preference number: 6 (lower is better)
Translates to: NRGFTLGGDCCC*LVLPECCSLRA
Trigger: GGCTCTAAGACTGCAGCATTCAGGAAGTACCAACAAACAGCAGCAATCACCACCCAAGGTAAAGCCTCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS CAA 90 bp TTCATTAACAGAGGCTTTACCTTGGGTGGTGATTGCTGCTGTTTGTaGGTACTTCCTGAATGCTGCAGTCTTAGAGCCCGGGGGATAAAT +
Preference number: 6 (lower is better)
Translates to: FINRGFTLGGDCCCL*VLPECCSLRARGIN
Trigger: ATTTATCCCCCGGGCTCTAAGACTGCAGCATTCAGGAAGTACCAACAAACAGCAGCAATCACCACCCAAGGTAAAGCCTCTGTTAATGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS CAA 90 bp AATTTCATTAACAGAGGCTTTACCTTGGGTGGTGATTGCTGCTGTTaGTTGGTACTTCCTGAATGCTGCAGTCTTAGAGCCCGGGGGATA +
Preference number: 6 (lower is better)
Translates to: NFINRGFTLGGDCCC*LVLPECCSLRARGI
Trigger: TATCCCCCGGGCTCTAAGACTGCAGCATTCAGGAAGTACCAACAAACAGCAGCAATCACCACCCAAGGTAAAGCCTCTGTTAATGAAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS TCA 72 bp AATCCTTTGTTACCATCCCATTCAGGGACTCTCCTGTaGGTGACTTGGCAAGAATGGTGGATACAGGTTGGA +
Preference number: 6 (lower is better)
Translates to: NPLLPSHSGTLL*VTWQEWWIQVG
Trigger: TCCAACCTGTATCCACCATTCTTGCCAAGTCACTCACAGGAGAGTCCCTGAATGGGATGGTAACAAAGGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
ENST00000580662.5
ENST00000584641.5
CDS TCA 72 bp CAACCATTACAAGACCCCTCATCTAAGTCTTCCACGTaGTATCCAGAGAGGGCGTTACTAGTTGCTGTCTCT +
Preference number: 6 (lower is better)
Translates to: QPLQDPSSKSST*YPERALLVAVS
Trigger: AGAGACAGCAACTAGTAACGCCCTCTCTGGATATCACGTGGAAGACTTAGATGAGGGGTCTTGTAATGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
CDS GCA 72 bp GAGGAAGAATCCCAACGTTTAGCTGTGGTTACTAGCTaGTGTTTTGCATGCATCAGGTATTCGAGATCAGGG +
Preference number: 6 (lower is better)
Translates to: EEESQRLAVVTS*CFACIRYSRSG
Trigger: CCCTGATCTCGAATACCTGATGCATGCAAAACAGCAGCTAGTAACCACAGCTAAACGTTGGGATTCTTCCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578783.1
CDS CCA 72 bp GAGAAGACTCTCGATTTTGATGCGTTCTATTTCCAATaGACAAGGCCCTGTGAAGTCTGCCATGGAGTACTG +
Preference number: 6 (lower is better)
Translates to: EKTLDFDAFYFQ*TRPCEVCHGVL
Trigger: CAGTACTCCATGGCAGACTTCACAGGGCCTTGTCCATTGGAAATAGAACGCATCAAAATCGAGAGTCTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579861.1
ENST00000579953.5
ENST00000580168.5
ENST00000580662.5
ENST00000580963.1
ENST00000581159.5
ENST00000584641.5
CDS GCA 72 bp AAAGCGACCAAAAAGTTGTCCATTCTGAGCATACTTTaGACCTCCAGAAACACCAGTGAGCATGAAGCTTGC +
Preference number: 6 (lower is better)
Translates to: KATKKLSILSIL*TSRNTSEHEAC
Trigger: GCAAGCTTCATGCTCACTGGTGTTTCTGGAGGTGCAAAGTATGCTCAGAATGGACAACTTTTTGGTCGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
CDS GCA 72 bp GAAGACTTTTCCCATGTCCACACTAAACAAGCTCCTTaGAGAAACCGCTTGCCGCCAAATGTAACCTTCAAT +
Preference number: 6 (lower is better)
Translates to: EDFSHVHTKQAP*RNRLPPNVTFN
Trigger: ATTGAAGGTTACATTTGGCGGCAAGCGGTTTCTGCAAGGAGCTTGTTTAGTGTGGACATGGGAAAAGTCTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS TCA 72 bp TCCTATCCATTCTTGACAGTTTTCTGGGACTTCTTGTaGTACCTGGGTAGTACTATCTCCGGCAGATATTGC +
Preference number: 6 (lower is better)
Translates to: SYPFLTVFWDFL*YLGSTISGRYC
Trigger: GCAATATCTGCCGGAGATAGTACTACCCAGGTATCACAAGAAGTCCCAGAAAACTGTCAAGAATGGATAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
ENST00000582864.1
CDS TCA 72 bp TCAGTAAGCTTAAAGCGACCAAAAAGTTGTCCATTCTaGGCATACTTTGCACCTCCAGAAACACCAGTGAGC +
Preference number: 6 (lower is better)
Translates to: SVSLKRPKSCPF*AYFAPPETPVS
Trigger: GCTCACTGGTGTTTCTGGAGGTGCAAAGTATGCTCAGAATGGACAACTTTTTGGTCGCTTTAAGCTTACTGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
CDS GCA 72 bp CAACGTTTAGCTGTGGTTACTAGCTGCTGTTTTGCATaGATCAGGTATTCGAGATCTTCTGTAGAAGCTGCA +
Preference number: 6 (lower is better)
Translates to: QRLAVVTSCCFA*IRYSRSSVEAA
Trigger: TGCAGCTTCTACAGAAGATCTCGAATACCTGATGCATGCAAAACAGCAGCTAGTAACCACAGCTAAACGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000578938.1
ENST00000579953.5
ENST00000580168.5
CDS GCA 72 bp GAGGAAGAATCCCAACGTTTAGCTGTGGTTACTAGCTaGTGTTTTGCATGCATCAGGTATTCGAGATCTTCT +
Preference number: 6 (lower is better)
Translates to: EEESQRLAVVTS*CFACIRYSRSS
Trigger: AGAAGATCTCGAATACCTGATGCATGCAAAACAGCAGCTAGTAACCACAGCTAAACGTTGGGATTCTTCCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000578938.1
ENST00000579953.5
ENST00000580168.5
CDS GCA 72 bp CTTTGCACCTCCAGAAACACCAGTGAGCATGAAGCTTaGCAGAATCTGCAATTGCACTTTAAGGTTGAACTT +
Preference number: 6 (lower is better)
Translates to: LCTSRNTSEHEA*QNLQLHFKVEL
Trigger: AAGTTCAACCTTAAAGTGCAATTGCAGATTCTGGCAAGCTTCATGCTCACTGGTGTTTCTGGAGGTGCAAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000578783.1
ENST00000579953.5
ENST00000580168.5
CDS CCA 72 bp ATCCAACTGTTCATCCCATTGTCTGTTAGGACTCCATaGTATGGTGGGAGTCATACTGATGTCTGGAAACAA +
Preference number: 6 (lower is better)
Translates to: IQLFIPLSVRTP*YGGSHTDVWKQ
Trigger: TTGTTTCCAGACATCAGTATGACTCCCACCATACCATGGAGTCCTAACAGACAATGGGATGAACAGTTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000358691.10
ENST00000579953.5
ENST00000580168.5
CDS TCA 72 bp AGACAGATTGAGTCAAACTCTTCCAAACGGATCCACTaGAATGGCCTTACCTCTGTTTCTGAGAGAAGTGTT +
Preference number: 6 (lower is better)
Translates to: RQIESNSSKRIH*NGLTSVSERSV
Trigger: AACACTTCTCTCAGAAACAGAGGTAAGGCCATTTCAGTGGATCCGTTTGGAAGAGTTTGACTCAATCTGTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584641.5
CDS CCA 72 bp TCTGCTAGTTCTTCCTGGGAATGTGCTGAAGTACACTaGGCACCATACCTACAGATTCCTTGTTCTAAAAAT +
Preference number: 6 (lower is better)
Translates to: SASSSWECAEVH*APYLQIPCSKN
Trigger: ATTTTTAGAACAAGGAATCTGTAGGTATGGTGCCCAGTGTACTTCAGCACATTCCCAGGAAGAACTAGCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
ENST00000580662.5
CDS CAA 90 bp TTTTCTCCCTTTAACCTCTTCAATTTCATTAACAGAGGCTTTACCTaGGGTGGTGATTGCTGCTGTTTGTTGGTACTTCCTGAATGCTGC +
Preference number: 6 (lower is better)
Translates to: FSPFNLFNFINRGFT*GGDCCCLLVLPECC
Trigger: GCAGCATTCAGGAAGTACCAACAAACAGCAGCAATCACCACCCAAGGTAAAGCCTCTGTTAATGAAATTGAAGAGGTTAAAGGGAGAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579953.5
CDS GCA 72 bp TTTTTGGTGCTGACAGTAACTGACAGGTCAGGATTGTaGTCTACCTTTACTCCTTCTATACATTCACTAAGC +
Preference number: 6 (lower is better)
Translates to: FLVLTVTDRSGL*STFTPSIHSLS
Trigger: GCTTAGTGAATGTATAGAAGGAGTAAAGGTAGAGCACAATCCTGACCTGTCAGTTACTGTCAGCACCAAAAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
CDS GCA 72 bp ACCAAAAGATTCAAACTTAAGGTCCTGGATACAAACTaGCAAACAGCTCTCCAGATAGATCACACAAACTGG +
Preference number: 6 (lower is better)
Translates to: TKRFKLKVLDTN*QTALQIDHTNW
Trigger: CCAGTTTGTGTGATCTATCTGGAGAGCTGTTTGGCAGTTTGTATCCAGGACCTTAAGTTTGAATCTTTTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000578938.1
CDS CAA 90 bp AGTATCTTCAGAAAGTGTTTCAGTAAGCTTAAAGCGACCAAAAAGTaGTCCATTCTGAGCATACTTTGCACCTCCAGAAACACCAGTGAG +
Preference number: 6 (lower is better)
Translates to: SIFRKCFSKLKATKK*SILSILCTSRNTSE
Trigger: CTCACTGGTGTTTCTGGAGGTGCAAAGTATGCTCAGAATGGACAACTTTTTGGTCGCTTTAAGCTTACTGAAACACTTTCTGAAGATACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
CDS CAA 90 bp CAGGTATTCGAGATCTTCTGTAGAAGCTGCATCAATCATTACTCTTaGCATGAGTACTGGTTCCAATCCAAAGTCGAAAACTATGGTTTG +
Preference number: 6 (lower is better)
Translates to: QVFEIFCRSCINHYS*HEYWFQSKVENYGL
Trigger: CAAACCATAGTTTTCGACTTTGGATTGGAACCAGTACTCATGCAAAGAGTAATGATTGATGCAGCTTCTACAGAAGATCTCGAATACCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
CDS GCA 72 bp GATACTAAAATGAGGACGATGAGCATCATAAAGCAATaGTACACGATACAGCATTCTTGCAGGCTTACAAGT +
Preference number: 6 (lower is better)
Translates to: DTKMRTMSIIKQ*YTIQHSCRLTS
Trigger: ACTTGTAAGCCTGCAAGAATGCTGTATCGTGTAGCATTGCTTTATGATGCTCATCGTCCTCATTTTAGTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
ENST00000582864.1
CDS CAA 72 bp GAGATCTTCTGTAGAAGCTGCATCAATCATTACTCTTaGCATGAGTACTGGTTCCAATCCAAAGTCGAAAAC +
Preference number: 6 (lower is better)
Translates to: EIFCRSCINHYS*HEYWFQSKVEN
Trigger: GTTTTCGACTTTGGATTGGAACCAGTACTCATGCAAAGAGTAATGATTGATGCAGCTTCTACAGAAGATCTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
CDS CAA 72 bp AGAAAGTGTTTCAGTAAGCTTAAAGCGACCAAAAAGTaGTCCATTCTGAGCATACTTTGCACCTCCAGAAAC +
Preference number: 6 (lower is better)
Translates to: RKCFSKLKATKK*SILSILCTSRN
Trigger: GTTTCTGGAGGTGCAAAGTATGCTCAGAATGGACAACTTTTTGGTCGCTTTAAGCTTACTGAAACACTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
CDS CAA 90 bp TCAGTTCCAAAGCATTTGTATCCAATATTCCCAGCATATGGTCTTTaGGTCCACACTAGTTCAATAAAATGTAGCATGACCAGCACTAGA +
Preference number: 6 (lower is better)
Translates to: SVPKHLYPIFPAYGL*VHTSSIKCSMTSTR
Trigger: TCTAGTGCTGGTCATGCTACATTTTATTGAACTAGTGTGGACCAAAAGACCATATGCTGGGAATATTGGATACAAATGCTTTGGAACTGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579861.1
CDS TCA 72 bp ATGTGTCCAGACATCTTTGACTCTGATTATTGCTTATaGTCCCCCATATGTGGAATTTCCACACCAAAAGAT +
Preference number: 6 (lower is better)
Translates to: MCPDIFDSDYCL*SPICGISTPKD
Trigger: ATCTTTTGGTGTGGAAATTCCACATATGGGGGATCATAAGCAATAATCAGAGTCAAAGATGTCTGGACACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578938.1
CDS GCA 72 bp AGATCTTCTGTAGAAGCTGCATCAATCATTACTCTTTaGATGAGTACTGGTTCCAATCCAAAGTCGAAAACT +
Preference number: 6 (lower is better)
Translates to: RSSVEAASIITL*MSTGSNPKSKT
Trigger: AGTTTTCGACTTTGGATTGGAACCAGTACTCATGCAAAGAGTAATGATTGATGCAGCTTCTACAGAAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5
CDS GCA 72 bp CAATATAAAGAAGGTCATGTAACCGTGACTGATAGTTaGTCTTGGTCAATGATTTGTCTAAAACGGACTGAG +
Preference number: 6 (lower is better)
Translates to: QYKEGHVTVTDS*SWSMICLKRTE
Trigger: CTCAGTCCGTTTTAGACAAATCATTGACCAAGAGCAACTATCAGTCACGGTTACATGACCTTCTTTATATTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000578783.1
ENST00000578938.1
ENST00000579953.5
ENST00000580168.5
CDS CAA 72 bp AACACCAGTGAGCATGAAGCTTGCCAGAATCTGCAATaGCACTTTAAGGTTGAACTTGCTGATTTCTTTATA +
Preference number: 6 (lower is better)
Translates to: NTSEHEACQNLQ*HFKVELADFFI
Trigger: TATAAAGAAATCAGCAAGTTCAACCTTAAAGTGCAATTGCAGATTCTGGCAAGCTTCATGCTCACTGGTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000578783.1
ENST00000579953.5
ENST00000580168.5
CDS CAA 72 bp TATGTCTTCTTTAGTTCTAAAGCCTCTAACTGGGCTTaGATCTGTTCAAAAGTGATTCCATGTAGGCTACTG +
Preference number: 6 (lower is better)
Translates to: YVFFSSKASNWA*ICSKVIPCRLL
Trigger: CAGTAGCCTACATGGAATCACTTTTGAACAGATCAAAGCCCAGTTAGAGGCTTTAGAACTAAAGAAGACATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358691.10
ENST00000579953.5
ENST00000580168.5
CDS CAA 72 bp GAAAACTTCTGTAGAAGCTGCATCAATCATTACTCTTaGCATGAGTACTGGTTCCAATCCAAAGTCGAAAAC +
Preference number: 6 (lower is better)
Translates to: ENFCRSCINHYS*HEYWFQSKVEN
Trigger: GTTTTCGACTTTGGATTGGAACCAGTACTCATGCAAAGAGTAATGATTGATGCAGCTTCTACAGAAGTTTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578783.1
CDS GCA 72 bp AAAACTTCTGTAGAAGCTGCATCAATCATTACTCTTTaGATGAGTACTGGTTCCAATCCAAAGTCGAAAACT +
Preference number: 6 (lower is better)
Translates to: KTSVEAASIITL*MSTGSNPKSKT
Trigger: AGTTTTCGACTTTGGATTGGAACCAGTACTCATGCAAAGAGTAATGATTGATGCAGCTTCTACAGAAGTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000578783.1
CDS CCA 72 bp AACACATATGTCTTCTTTAGTTCTAAAGCCTCTAACTaGGCTTTGATCTGTTCAAAAGTGATTCCATGTAGG +
Preference number: 6 (lower is better)
Translates to: NTYVFFSSKASN*ALICSKVIPCR
Trigger: CCTACATGGAATCACTTTTGAACAGATCAAAGCCCAGTTAGAGGCTTTAGAACTAAAGAAGACATATGTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000358691.10
ENST00000579953.5
ENST00000580168.5
CDS CAA 72 bp AAGCATTTGTATCCAATATTCCCAGCATATGGTCTTTaGGTCCACACTAGTTCAATAAAATGTAGCATGACC +
Preference number: 6 (lower is better)
Translates to: KHLYPIFPAYGL*VHTSSIKCSMT
Trigger: GGTCATGCTACATTTTATTGAACTAGTGTGGACCAAAAGACCATATGCTGGGAATATTGGATACAAATGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579861.1
CDS CAA 90 bp AGTCTAAATATTACCTTCTGTAGAAGCTGCATCAATCATTACTCTTaGCATGAGTACTGGTTCCAATCCAAAGTCGAAAACTATGGTTTG +
Preference number: 6 (lower is better)
Translates to: SLNITFCRSCINHYS*HEYWFQSKVENYGL
Trigger: CAAACCATAGTTTTCGACTTTGGATTGGAACCAGTACTCATGCAAAGAGTAATGATTGATGCAGCTTCTACAGAAGGTAATATTTAGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582864.1
CDS TCA 72 bp TTCTATACATTCACTAAGCACTTTCTCAGGAGACAATaGATTCATCCACTTTTCTATCAAGGTTTCCATGTA +
Preference number: 6 (lower is better)
Translates to: FYTFTKHFLRRQ*IHPLFYQGFHV
Trigger: TACATGGAAACCTTGATAGAAAAGTGGATGAATTCATTGTCTCCTGAGAAAGTGCTTAGTGAATGTATAGAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000358691.10
ENST00000417253.7
ENST00000579953.5
ENST00000580168.5