Pregenerated sensors for HELT (Homo sapiens)
Ensembl gene IDs: ENSG00000187821Ensembl transcript IDs: ENST00000338875.5, ENST00000505610.5, ENST00000513599.1, ENST00000515777.5
Found 45 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | GCCCCTCGCAGCGGCCCAGCGCCTGCTGGTCGGGCACTGTGGCGCTaGAGAGGACCAGCGAGCGGACGCGGCTGCGGATCTGCGCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: APRSGPAPAGRALWR*RGPASGRGCGSAPE Trigger: CTCTGGCGCAGATCCGCAGCCGCGTCCGCTCGCTGGTCCTCTCCAGCGCCACAGTGCCCGACCAGCAGGCGCTGGGCCGCTGCGAGGGGC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338875.5 ENST00000513599.1 |
||
| CDS CCA 90 bp | GTCCAGGCCCTGCACCGGTGTCAGGAAGGGGCTGTGCTGCTGCGCTaGGCTAGCGAGCGGCACTGGCGCGCTGGGCAGGTAGGGCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: VQALHRCQEGAVLLR*ASERHWRAGQVGQR Trigger: GCGCTGCCCTACCTGCCCAGCGCGCCAGTGCCGCTCGCTAGCCCAGCGCAGCAGCACAGCCCCTTCCTGACACCGGTGCAGGGCCTGGAC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000338875.5 ENST00000505610.5 ENST00000513599.1 ENST00000515777.5 |
||
| CDS GCA 90 bp | GGTCGGGCACTGTGGCGCTGGAGAGGACCAGCGAGCGGACGCGGCTaGGGATCTGCGCCAGAGCCTCCTGAGGTTCGCCCTGCGCTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: GRALWRWRGPASGRG*GSAPEPPEVRPALR Trigger: CCTGAGCGCAGGGCGAACCTCAGGAGGCTCTGGCGCAGATCCGCAGCCGCGTCCGCTCGCTGGTCCTCTCCAGCGCCACAGTGCCCGACC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513599.1 |
||
| CDS CCA 90 bp | CTCTGCAAAAGGAGGAAGGGCCCCTCGCAGCGGCCCAGCGCCTGCTaGTCGGGCACTGTGGCGCTGGAGAGGACCAGCGAGCGGACGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LCKRRKGPSQRPSAC*SGTVALERTSERTR Trigger: CCGCGTCCGCTCGCTGGTCCTCTCCAGCGCCACAGTGCCCGACCAGCAGGCGCTGGGCCGCTGCGAGGGGCCCTTCCTCCTTTTGCAGAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000338875.5 ENST00000513599.1 |
||
| CDS CCA 90 bp | GGCTCGGGCGTCTCCGCAGAGTGGCCGCAGAGGCCTCCCAACGCCTaGCACCCGGCTCCGGGTCGCCAACGTTACCTGCTTCGCCAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSGVSAEWPQRPPNA*HPAPGRQRYLLRQG Trigger: GCCTTGGCGAAGCAGGTAACGTTGGCGACCCGGAGCCGGGTGCCAGGCGTTGGGAGGCCTCTGCGGCCACTCTGCGGAGACGCCCGAGCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513599.1 |
||
| CDS GCA 90 bp | GGTCGGGCACTGTGGCGCTGGAGAGGACCAGCGAGCGGACGCGGCTaGGGATCTGCGCCAGAGCCTCCTGAGGTTCGCCCTGCTTCGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GRALWRWRGPASGRG*GSAPEPPEVRPASP Trigger: TGGCGAAGCAGGGCGAACCTCAGGAGGCTCTGGCGCAGATCCGCAGCCGCGTCCGCTCGCTGGTCCTCTCCAGCGCCACAGTGCCCGACC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338875.5 |
||
| CDS GCA 90 bp | GAACTCTGCAAAAGGAGGAAGGGCCCCTCGCAGCGGCCCAGCGCCTaGTGGTCGGGCACTGTGGCGCTGGAGAGGACCAGCGAGCGGACG | + |
|
Preference number: 5 (lower is better) Translates to: ELCKRRKGPSQRPSA*WSGTVALERTSERT Trigger: CGTCCGCTCGCTGGTCCTCTCCAGCGCCACAGTGCCCGACCAGCAGGCGCTGGGCCGCTGCGAGGGGCCCTTCCTCCTTTTGCAGAGTTC 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000338875.5 ENST00000513599.1 |
||
| CDS GCA 90 bp | CCCAGCGGCGGAAAGGCGGGCTCCGCGCCCAGGCGGGCCTTGGACTaGAAGAAGGCGAGGATGCGCGCGTACTTCGTGTCCTTGGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PSGGKAGSAPRRALD*KKARMRAYFVSLVS Trigger: GGAGACCAAGGACACGAAGTACGCGCGCATCCTCGCCTTCTTGCAGTCCAAGGCCCGCCTGGGCGCGGAGCCCGCCTTTCCGCCGCTGGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000338875.5 ENST00000505610.5 ENST00000513599.1 ENST00000515777.5 |
||
| CDS CCA 90 bp | GCGAACCCAGCGGCGGAAAGGCGGGCTCCGCGCCCAGGCGGGCCTTaGACTGCAAGAAGGCGAGGATGCGCGCGTACTTCGTGTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ANPAAERRAPRPGGP*TARRRGCARTSCPW Trigger: CCAAGGACACGAAGTACGCGCGCATCCTCGCCTTCTTGCAGTCCAAGGCCCGCCTGGGCGCGGAGCCCGCCTTTCCGCCGCTGGGTTCGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000338875.5 ENST00000505610.5 ENST00000513599.1 ENST00000515777.5 |
||
| CDS GCA 90 bp | CGGGCTCCGCGCCCAGGCGGGCCTTGGACTGCAAGAAGGCGAGGATaGGCGCGTACTTCGTGTCCTTGGTCTCCATCCGCTCCACCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RAPRPGGPWTARRRG*ARTSCPWSPSAPPW Trigger: CCACGGTGGAGCGGATGGAGACCAAGGACACGAAGTACGCGCGCATCCTCGCCTTCTTGCAGTCCAAGGCCCGCCTGGGCGCGGAGCCCG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000338875.5 ENST00000505610.5 ENST00000513599.1 ENST00000515777.5 |
||
| CDS CCA 90 bp | AGCTTGTCTGACATCCTGGTCAGTACGCGCCCTCGGGAGAGGCGGTaGCGCGGGGCACCCGTCCACTTTTCCGCCTCGTGTGCCTCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SLSDILVSTRPRERR*RGAPVHFSASCASS Trigger: CGAGGAGGCACACGAGGCGGAAAAGTGGACGGGTGCCCCGCGCCACCGCCTCTCCCGAGGGCGCGTACTGACCAGGATGTCAGACAAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000505610.5 ENST00000513599.1 ENST00000515777.5 |
||
| CDS GCA 90 bp | GGCCTCCCAACGCCTGGCACCCGGCTCCGGGTCGCCAACGTTACCTaGTTCGCCAAGGCCATGGGCACTGTCTTGCCCAGCTCGTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: GLPTPGTRLRVANVT*FAKAMGTVLPSSFK Trigger: CTTGAACGAGCTGGGCAAGACAGTGCCCATGGCCTTGGCGAAGCAGGTAACGTTGGCGACCCGGAGCCGGGTGCCAGGCGTTGGGAGGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513599.1 |
||
| CDS TCA 90 bp | GTGCGGGCACTTCCCTGCCATCGGTCCACCCAAGTGGCGGGTCGGTaGGTCAGATGCCTCCACCACCAGGGCGCAAGTGCCATTTGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VRALPCHRSTQVAGR*VRCLHHQGASAIWA Trigger: AGCCCAAATGGCACTTGCGCCCTGGTGGTGGAGGCATCTGACTCACCGACCCGCCACTTGGGTGGACCGATGGCAGGGAAGTGCCCGCAC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338875.5 |
||
| CDS CCA 90 bp | CTCAAAGTCCCGTGCGGGCACTTCCCTGCCATCGGTCCACCCAAGTaGCGGGTCGGTGAGTCAGATGCCTCCACCACCAGGGCGCAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LKVPCGHFPAIGPPK*RVGESDASTTRAQV Trigger: CACTTGCGCCCTGGTGGTGGAGGCATCTGACTCACCGACCCGCCACTTGGGTGGACCGATGGCAGGGAAGTGCCCGCACGGGACTTTGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338875.5 |
||
| CDS GCA 90 bp | GAAACGGGGGTTCTCACTCGAGATTCCTCCACACTCAAAGTCCCGTaGGGGCACTTCCCTGCCATCGGTCCACCCAAGTGGCGGGTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: ETGVLTRDSSTLKVP*GHFPAIGPPKWRVG Trigger: ACCGACCCGCCACTTGGGTGGACCGATGGCAGGGAAGTGCCCGCACGGGACTTTGAGTGTGGAGGAATCTCGAGTGAGAACCCCCGTTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338875.5 |
||
| CDS TCA 90 bp | CACTTTATGAGAAACGGGGGTTCTTTTGCGTTCCTTGAGCTTGTCTaGCATCCTGGTCAGTACGCGCCCTCGGGAGAGGCGGTGGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: HFMRNGGSFAFLELV*HPGQYAPSGEAVAR Trigger: CCGCGCCACCGCCTCTCCCGAGGGCGCGTACTGACCAGGATGTCAGACAAGCTCAAGGAACGCAAAAGAACCCCCGTTTCTCATAAAGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000505610.5 ENST00000513599.1 ENST00000515777.5 |
||
| CDS TCA 90 bp | TGCGCGCGTACTTCGTGTCCTTGGTCTCCATCCGCTCCACCGTGGTaGGGTAATGCACCAGGTTCTTCATGCACTCGTGGTAGCCATAGT | + |
|
Preference number: 5 (lower is better) Translates to: CARTSCPWSPSAPPW*GNAPGSSCTRGSHS Trigger: ACTATGGCTACCACGAGTGCATGAAGAACCTGGTGCATTACCTCACCACGGTGGAGCGGATGGAGACCAAGGACACGAAGTACGCGCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000338875.5 ENST00000505610.5 ENST00000513599.1 ENST00000515777.5 |
||
| CDS TCA 90 bp | CCAAGGCCATGGGCACTGTCTTGCCCAGCTCGTTCAAGCAGCGGTTaGTCCTGTCCCTCCTCCGCTTTTCTATCACTTTATGAGAAACGG | + |
|
Preference number: 5 (lower is better) Translates to: PRPWALSCPARSSSG*SCPSSAFLSLYEKR Trigger: CCGTTTCTCATAAAGTGATAGAAAAGCGGAGGAGGGACAGGATCAACCGCTGCTTGAACGAGCTGGGCAAGACAGTGCCCATGGCCTTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000338875.5 ENST00000505610.5 ENST00000513599.1 ENST00000515777.5 |
||
| CDS CCA 72 bp | CCTCGCAGCGGCCCAGCGCCTGCTGGTCGGGCACTGTaGCGCTGGAGAGGACCAGCGAGCGGACGCGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: PRSGPAPAGRAL*RWRGPASGRGC Trigger: GCAGCCGCGTCCGCTCGCTGGTCCTCTCCAGCGCCACAGTGCCCGACCAGCAGGCGCTGGGCCGCTGCGAGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338875.5 ENST00000513599.1 |
||
| CDS CCA 72 bp | AGCGGCCCAGCGCCTGCTGGTCGGGCACTGTGGCGCTaGAGAGGACCAGCGAGCGGACGCGGCTGCGGATCT | + |
|
Preference number: 6 (lower is better) Translates to: SGPAPAGRALWR*RGPASGRGCGS Trigger: AGATCCGCAGCCGCGTCCGCTCGCTGGTCCTCTCCAGCGCCACAGTGCCCGACCAGCAGGCGCTGGGCCGCT 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338875.5 ENST00000513599.1 |
||
| CDS CCA 72 bp | AGGAGGAAGGGCCCCTCGCAGCGGCCCAGCGCCTGCTaGTCGGGCACTGTGGCGCTGGAGAGGACCAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RRKGPSQRPSAC*SGTVALERTSE Trigger: CTCGCTGGTCCTCTCCAGCGCCACAGTGCCCGACCAGCAGGCGCTGGGCCGCTGCGAGGGGCCCTTCCTCCT 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000338875.5 ENST00000513599.1 |
||
| CDS GCA 72 bp | CTGTGGCGCTGGAGAGGACCAGCGAGCGGACGCGGCTaGGGATCTGCGCCAGAGCCTCCTGAGGTTCGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: LWRWRGPASGRG*GSAPEPPEVRP Trigger: AGGGCGAACCTCAGGAGGCTCTGGCGCAGATCCGCAGCCGCGTCCGCTCGCTGGTCCTCTCCAGCGCCACAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000338875.5 ENST00000513599.1 |
||
| CDS GCA 72 bp | AAAAGGAGGAAGGGCCCCTCGCAGCGGCCCAGCGCCTaGTGGTCGGGCACTGTGGCGCTGGAGAGGACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KRRKGPSQRPSA*WSGTVALERTS Trigger: GCTGGTCCTCTCCAGCGCCACAGTGCCCGACCAGCAGGCGCTGGGCCGCTGCGAGGGGCCCTTCCTCCTTTT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000338875.5 ENST00000513599.1 |
||
| CDS CCA 72 bp | CTGCACCGGTGTCAGGAAGGGGCTGTGCTGCTGCGCTaGGCTAGCGAGCGGCACTGGCGCGCTGGGCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LHRCQEGAVLLR*ASERHWRAGQV Trigger: TACCTGCCCAGCGCGCCAGTGCCGCTCGCTAGCCCAGCGCAGCAGCACAGCCCCTTCCTGACACCGGTGCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000338875.5 ENST00000505610.5 ENST00000513599.1 ENST00000515777.5 |
||
| CDS CAA 90 bp | AGCGAACCCAGCGGCGGAAAGGCGGGCTCCGCGCCCAGGCGGGCCTaGGACTGCAAGAAGGCGAGGATGCGCGCGTACTTCGTGTCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SEPSGGKAGSAPRRA*DCKKARMRAYFVSL Trigger: CAAGGACACGAAGTACGCGCGCATCCTCGCCTTCTTGCAGTCCAAGGCCCGCCTGGGCGCGGAGCCCGCCTTTCCGCCGCTGGGTTCGCT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000338875.5 ENST00000505610.5 ENST00000513599.1 ENST00000515777.5 |
||
| CDS CCA 72 bp | GACATCCTGGTCAGTACGCGCCCTCGGGAGAGGCGGTaGCGCGGGGCACCCGTCCACTTTTCCGCCTCGTGT | + |
|
Preference number: 6 (lower is better) Translates to: DILVSTRPRERR*RGAPVHFSASC Trigger: ACACGAGGCGGAAAAGTGGACGGGTGCCCCGCGCCACCGCCTCTCCCGAGGGCGCGTACTGACCAGGATGTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000505610.5 ENST00000513599.1 ENST00000515777.5 |
||
| CDS CCA 72 bp | GTCTCCGCAGAGTGGCCGCAGAGGCCTCCCAACGCCTaGCACCCGGCTCCGGGTCGCCAACGTTACCTGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VSAEWPQRPPNA*HPAPGRQRYLL Trigger: AAGCAGGTAACGTTGGCGACCCGGAGCCGGGTGCCAGGCGTTGGGAGGCCTCTGCGGCCACTCTGCGGAGAC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513599.1 |
||
| CDS GCA 72 bp | ACGCCTGGCACCCGGCTCCGGGTCGCCAACGTTACCTaGTTCGCCAAGGCCATGGGCACTGTCTTGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TPGTRLRVANVT*FAKAMGTVLPS Trigger: GCTGGGCAAGACAGTGCCCATGGCCTTGGCGAAGCAGGTAACGTTGGCGACCCGGAGCCGGGTGCCAGGCGT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513599.1 |
||
| CDS CCA 72 bp | CCGTGCGGGCACTTCCCTGCCATCGGTCCACCCAAGTaGCGGGTCGGTGAGTCAGATGCCTCCACCACCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PCGHFPAIGPPK*RVGESDASTTR Trigger: CCTGGTGGTGGAGGCATCTGACTCACCGACCCGCCACTTGGGTGGACCGATGGCAGGGAAGTGCCCGCACGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338875.5 |
||
| CDS TCA 72 bp | CTTCCCTGCCATCGGTCCACCCAAGTGGCGGGTCGGTaGGTCAGATGCCTCCACCACCAGGGCGCAAGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: LPCHRSTQVAGR*VRCLHHQGASA Trigger: GGCACTTGCGCCCTGGTGGTGGAGGCATCTGACTCACCGACCCGCCACTTGGGTGGACCGATGGCAGGGAAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338875.5 |
||
| CDS GCA 72 bp | CGCCCAGGCGGGCCTTGGACTGCAAGAAGGCGAGGATaGGCGCGTACTTCGTGTCCTTGGTCTCCATCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: RPGGPWTARRRG*ARTSCPWSPSA Trigger: AGCGGATGGAGACCAAGGACACGAAGTACGCGCGCATCCTCGCCTTCTTGCAGTCCAAGGCCCGCCTGGGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000338875.5 ENST00000505610.5 ENST00000513599.1 ENST00000515777.5 |
||
| CDS CCA 72 bp | GAGCCTCCTGAGGTTCGCCCTGCTTCGCCAAGGCCATaGGCACTGTCTTGCCCAGCTCGTTCAAGCAGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: EPPEVRPASPRP*ALSCPARSSSG Trigger: ACCGCTGCTTGAACGAGCTGGGCAAGACAGTGCCCATGGCCTTGGCGAAGCAGGGCGAACCTCAGGAGGCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338875.5 |
||
| CDS CAA 90 bp | TCCAGCTTCCCGGAACTCTGCTTCGCCAAGGCCATGGGCACTGTCTaGCCCAGCTCGTTCAAGCAGCGGTTGATCCTGTCCCTCCTCCGC | + |
|
Preference number: 6 (lower is better) Translates to: SSFPELCFAKAMGTV*PSSFKQRLILSLLR Trigger: GCGGAGGAGGGACAGGATCAACCGCTGCTTGAACGAGCTGGGCAAGACAGTGCCCATGGCCTTGGCGAAGCAGAGTTCCGGGAAGCTGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505610.5 ENST00000515777.5 |
||
| CDS CCA 72 bp | TCCGGGTCGCCAACGTTACCTGCTTCGCCAAGGCCATaGGCACTGTCTTGCCCAGCTCGTTCAAGCAGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: SGSPTLPASPRP*ALSCPARSSSG Trigger: ACCGCTGCTTGAACGAGCTGGGCAAGACAGTGCCCATGGCCTTGGCGAAGCAGGTAACGTTGGCGACCCGGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000513599.1 |
||
| CDS CCA 72 bp | TCTCCAGCTTCCCGGAACTCTGCTTCGCCAAGGCCATaGGCACTGTCTTGCCCAGCTCGTTCAAGCAGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: SPASRNSASPRP*ALSCPARSSSG Trigger: ACCGCTGCTTGAACGAGCTGGGCAAGACAGTGCCCATGGCCTTGGCGAAGCAGAGTTCCGGGAAGCTGGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000505610.5 ENST00000515777.5 |
||
| CDS GCA 72 bp | TCGGTGAGTCAGATGCCTCCACCACCAGGGCGCAAGTaGCATTTGGGCTCAGCCGACTCACTTTGCGTTCCT | + |
|
Preference number: 6 (lower is better) Translates to: SVSQMPPPPGRK*HLGSADSLCVP Trigger: AGGAACGCAAAGTGAGTCGGCTGAGCCCAAATGGCACTTGCGCCCTGGTGGTGGAGGCATCTGACTCACCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338875.5 |
||
| CDS GCA 72 bp | GTTCTCACTCGAGATTCCTCCACACTCAAAGTCCCGTaGGGGCACTTCCCTGCCATCGGTCCACCCAAGTGG | + |
|
Preference number: 6 (lower is better) Translates to: VLTRDSSTLKVP*GHFPAIGPPKW Trigger: CCACTTGGGTGGACCGATGGCAGGGAAGTGCCCGCACGGGACTTTGAGTGTGGAGGAATCTCGAGTGAGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000338875.5 |
||
| CDS TCA 72 bp | AGAAACGGGGGTTCTTTTGCGTTCCTTGAGCTTGTCTaGCATCCTGGTCAGTACGCGCCCTCGGGAGAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: RNGGSFAFLELV*HPGQYAPSGEA Trigger: CGCCTCTCCCGAGGGCGCGTACTGACCAGGATGTCAGACAAGCTCAAGGAACGCAAAAGAACCCCCGTTTCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENST00000505610.5 ENST00000513599.1 ENST00000515777.5 |
||
| CDS CCA 72 bp | GTCAGATGCCTCCACCACCAGGGCGCAAGTGCCATTTaGGCTCAGCCGACTCACTTTGCGTTCCTTGAGCTT | + |
|
Preference number: 6 (lower is better) Translates to: VRCLHHQGASAI*AQPTHFAFLEL Trigger: AAGCTCAAGGAACGCAAAGTGAGTCGGCTGAGCCCAAATGGCACTTGCGCCCTGGTGGTGGAGGCATCTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338875.5 |
||
| CDS TCA 72 bp | ACTTCGTGTCCTTGGTCTCCATCCGCTCCACCGTGGTaGGGTAATGCACCAGGTTCTTCATGCACTCGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TSCPWSPSAPPW*GNAPGSSCTRG Trigger: ACCACGAGTGCATGAAGAACCTGGTGCATTACCTCACCACGGTGGAGCGGATGGAGACCAAGGACACGAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENST00000338875.5 ENST00000505610.5 ENST00000513599.1 ENST00000515777.5 |
||
| CDS TCA 72 bp | TGGGCACTGTCTTGCCCAGCTCGTTCAAGCAGCGGTTaGTCCTGTCCCTCCTCCGCTTTTCTATCACTTTAT | + |
|
Preference number: 6 (lower is better) Translates to: WALSCPARSSSG*SCPSSAFLSLY Trigger: ATAAAGTGATAGAAAAGCGGAGGAGGGACAGGATCAACCGCTGCTTGAACGAGCTGGGCAAGACAGTGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000338875.5 ENST00000505610.5 ENST00000513599.1 ENST00000515777.5 |
||
| CDS CAA 72 bp | ATGGGCACTGTCTTGCCCAGCTCGTTCAAGCAGCGGTaGATCCTGTCCCTCCTCCGCTTTTCTATCACTTTA | + |
|
Preference number: 6 (lower is better) Translates to: MGTVLPSSFKQR*ILSLLRFSITL Trigger: TAAAGTGATAGAAAAGCGGAGGAGGGACAGGATCAACCGCTGCTTGAACGAGCTGGGCAAGACAGTGCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000338875.5 ENST00000505610.5 ENST00000513599.1 ENST00000515777.5 |
||
| CDS TCA 72 bp | TTGATCCTGTCCCTCCTCCGCTTTTCTATCACTTTATaGGAAACGGGGGTTCTCACTCGAGATTCCTCCACA | + |
|
Preference number: 6 (lower is better) Translates to: LILSLLRFSITL*ETGVLTRDSST Trigger: TGTGGAGGAATCTCGAGTGAGAACCCCCGTTTCTCATAAAGTGATAGAAAAGCGGAGGAGGGACAGGATCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000338875.5 |
||
| CDS CCA 72 bp | TCTTCATGCACTCGTGGTAGCCATAGTGGAAGTAGTTaGCAAACTCCGCTAGAAGTTCTTTTTCCCTTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: SSCTRGSHSGSS*QTPLEVLFPFP Trigger: GGGGAAGGGAAAAAGAACTTCTAGCGGAGTTTGCCAACTACTTCCACTATGGCTACCACGAGTGCATGAAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000505610.5 ENST00000513599.1 |
||
| CDS CCA 72 bp | TCTTCATGCACTCGTGGTAGCCATAGTGGAAGTAGTTaGCAAACTCCGCTAGAAGTTCTGCTTTTTCCCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSCTRGSHSGSS*QTPLEVLLFPF Trigger: GAAGGGAAAAAGCAGAACTTCTAGCGGAGTTTGCCAACTACTTCCACTATGGCTACCACGAGTGCATGAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000338875.5 ENST00000515777.5 |
||