RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HEG1 (Homo sapiens)

Ensembl gene IDs: ENSG00000173706

Ensembl transcript IDs: ENST00000311127.9, ENST00000477536.1, ENST00000482699.1, ENST00000487661.1, ENST00000488654.1, ENST00000650592.1

Found 808 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TCCTCCACTGTGGTCACGCCCCGCATGCCTGTCCCTCTTCCTGCTTaGCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCTG +
Preference number: 1 (lower is better)
Translates to: SSTVVTPRMPVPLPA*HSAWLPTNPGRSLL
Trigger: CAGGAGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGGAAGAGGGACAGGCATGCGGGGCGTGACCACAGTGGAGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 90 bp TGGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTaGTATCAGGTGTTTCCCCTCGGCCTAGGCGGGACCCTTCTGCAG +
Preference number: 1 (lower is better)
Translates to: WAESLGVPGVHPGLF*YQVFPLGLGGTLLQ
Trigger: CTGCAGAAGGGTCCCGCCTAGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 90 bp TGTCTCCTCCACTGTGGTCACGCCCCGCATGCCTGTCCCTCTTCCTaGTTGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCT +
Preference number: 1 (lower is better)
Translates to: CLLHCGHAPHACPSS*LPLSVAPDKSWAQP
Trigger: AGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGGAAGAGGGACAGGCATGCGGGGCGTGACCACAGTGGAGGAGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 90 bp GAATCACACACCCCAGGTGCAGGGGCTGACATGGAGCACTGTGTCTaGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTC +
Preference number: 1 (lower is better)
Translates to: ESHTPGAGADMEHCV*AESLGVPGVHPGLF
Trigger: GAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACACAGTGCTCCATGTCAGCCCCTGCACCTGGGGTGTGTGATTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 90 bp GCATCTGTGCACGTGAATCACACACCCCAGGTGCAGGGGCTGACATaGAGCACTGTGTCTGGGCGGAGAGCCTCGGCGTGCCAGGTGTGC +
Preference number: 1 (lower is better)
Translates to: ASVHVNHTPQVQGLT*STVSGRRASACQVC
Trigger: GCACACCTGGCACGCCGAGGCTCTCCGCCCAGACACAGTGCTCCATGTCAGCCCCTGCACCTGGGGTGTGTGATTCACGTGCACAGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 90 bp CAGGGGCTGACATGGAGCACTGTGTCTGGGCGGAGAGCCTCGGCGTaGCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCC +
Preference number: 1 (lower is better)
Translates to: QGLTWSTVSGRRASA*QVCIQASSAIRCFP
Trigger: GGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACACAGTGCTCCATGTCAGCCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 90 bp TGGTTCCACATCCACCTGTCTCCTCCACTGTGGTCACGCCCCGCATaGCTGTCCCTCTTCCTGCTTGCCACTCAGCGTGGCTCCCGACAA +
Preference number: 1 (lower is better)
Translates to: WFHIHLSPPLWSRPA*LSLFLLATQRGSRQ
Trigger: TTGTCGGGAGCCACGCTGAGTGGCAAGCAGGAAGAGGGACAGGCATGCGGGGCGTGACCACAGTGGAGGAGACAGGTGGATGTGGAACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 90 bp CGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTaGAGCTGGCCTCTCCCTTCCTCACTGGGTCACAGACATGCTTTA +
Preference number: 1 (lower is better)
Translates to: RPRRDPSAARNPVQE*SWPLPSSLGHRHAL
Trigger: TAAAGCATGTCTGTGACCCAGTGAGGAAGGGAGAGGCCAGCTGCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR TCA 90 bp GGCATGCTGCGGAAGGAGCCAAGAAGCCTAGTCTGTGGGCTCAGGTaGGCTGCAGGAGCTCAGAACTCTCCAGTTAGGTGCGAGGCCGTG +
Preference number: 1 (lower is better)
Translates to: GMLRKEPRSLVCGLR*AAGAQNSPVRCEAV
Trigger: CACGGCCTCGCACCTAACTGGAGAGTTCTGAGCTCCTGCAGCTCACCTGAGCCCACAGACTAGGCTTCTTGGCTCCTTCCGCAGCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 90 bp GAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCAAACGCCTCCTaGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGGTGCCTCC +
Preference number: 1 (lower is better)
Translates to: EPHALEVPSPPPNAS*KLWRLCDLNLVGAS
Trigger: GGAGGCACCCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR TCA 90 bp CTGGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTaGCTGGCTCAGAGCAATGAGTCCCTCTCTCTCCTGGACTTAAAA +
Preference number: 1 (lower is better)
Translates to: LGAASWCGPLSRGPR*LAQSNESLSLLDLK
Trigger: TTTTAAGTCCAGGAGAGAGAGGGACTCATTGCTCTGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482699.1
3UTR CCA 90 bp GTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTAGCTaGGGGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGG +
Preference number: 1 (lower is better)
Translates to: VCQDSKAGGYSGQSS*GSQADKGFSPASTG
Trigger: CCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCCCCCAGCTACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 90 bp GCAGGAGTGCAGCTGGCCTCTCCCTTCCTCACTGGGTCACAGACATaGTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCT +
Preference number: 1 (lower is better)
Translates to: AGVQLASPFLTGSQT*FTHVPLEPHALEVP
Trigger: AGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGTGAGGAAGGGAGAGGCCAGCTGCACTCCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 90 bp CTAGGAACCCCGTGCAGGAGTGCAGCTGGCCTCTCCCTTCCTCACTaGGTCACAGACATGCTTTACTCATGTCCCCTTAGAGCCTCATGC +
Preference number: 1 (lower is better)
Translates to: LGTPCRSAAGLSLPH*VTDMLYSCPLRASC
Trigger: GCATGAGGCTCTAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGTGAGGAAGGGAGAGGCCAGCTGCACTCCTGCACGGGGTTCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 90 bp ATGGGCACTTCCATGCCCACCTCTCAAGGATACTGTGAGGAGCCTTaGCCAGAGCCTGGTCATGGTAGGAGCATGTCAGTTCATCCGCCT +
Preference number: 1 (lower is better)
Translates to: MGTSMPTSQGYCEEP*PEPGHGRSMSVHPP
Trigger: AGGCGGATGAACTGACATGCTCCTACCATGACCAGGCTCTGGGCAAGGCTCCTCACAGTATCCTTGAGAGGTGGGCATGGAAGTGCCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 90 bp GATGATTTGTCAGCTGTGACGTCAGCTGAAGGCAGTGGAAGTGTATaGCTGGGAATAGCCTCCCTACATGGCTCTTCCCACAGCTGCGGG +
Preference number: 1 (lower is better)
Translates to: DDLSAVTSAEGSGSV*LGIASLHGSSHSCG
Trigger: CCCGCAGCTGTGGGAAGAGCCATGTAGGGAGGCTATTCCCAGGCATACACTTCCACTGCCTTCAGCTGACGTCACAGCTGACAAATCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 90 bp TGTGTGACGGGACACACAGATGCCCCTGCGCCCGGCTCCTCTCTATaGAGGTTTAAGCATCTCTTGAGCAGTTACACATCACTTGCCCCT +
Preference number: 1 (lower is better)
Translates to: CVTGHTDAPAPGSSL*RFKHLLSSYTSLAP
Trigger: AGGGGCAAGTGATGTGTAACTGCTCAAGAGATGCTTAAACCTCCATAGAGAGGAGCCGGGCGCAGGGGCATCTGTGTGTCCCGTCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR TCA 90 bp GTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGAGCAATaGGTCCCTCTCTCTCCTGGACTTAAAAGTAGTCTCTTCTTCTGC +
Preference number: 1 (lower is better)
Translates to: VRSSEQRSQVTGSEQ*VPLSPGLKSSLFFC
Trigger: GCAGAAGAAGAGACTACTTTTAAGTCCAGGAGAGAGAGGGACTCATTGCTCTGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482699.1
3UTR CCA 90 bp TTCTGGGTACAAAGTGCTGCAGTAGCCGGTGAGCAAACTCATGTGTaGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGC +
Preference number: 1 (lower is better)
Translates to: FWVQSAAVAGEQTHV*LHLGSLFFLRNPHS
Trigger: GCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACACATGAGTTTGCTCACCGGCTACTGCAGCACTTTGTACCCAGAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR TCA 90 bp GATGAAAGACGGGTTATACTGTCCGGGGAAAATGCAAGAATGCCGTaGTCCTGGCAGTCCAGTGTAGGCCGGGTAGAGTCCGTTTCGTTC +
Preference number: 1 (lower is better)
Translates to: DERRVILSGENARMP*SWQSSVGRVESVSF
Trigger: GAACGAAACGGACTCTACCCGGCCTACACTGGACTGCCAGGATCACGGCATTCTTGCATTTTCCCCGGACAGTATAACCCGTCTTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482699.1
3UTR TCA 90 bp GTTTGTGGACATGAGATTCTGGGTACAAAGTGCTGCAGTAGCCGGTaGGCAAACTCATGTGTGGCTCCATCTCGGCTCCCTGTTCTTCCT +
Preference number: 1 (lower is better)
Translates to: VCGHEILGTKCCSSR*ANSCVAPSRLPVLP
Trigger: AGGAAGAACAGGGAGCCGAGATGGAGCCACACATGAGTTTGCTCACCGGCTACTGCAGCACTTTGTACCCAGAATCTCATGTCCACAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 90 bp CAGCCCATCCCTCTAACCACATCCAGCTGCAGGGGCTCAACAAGCTaGTTTCCTAGAGTGGTGAAACCTGCGTTCAGTTTGACATTTCTC +
Preference number: 1 (lower is better)
Translates to: QPIPLTTSSCRGSTS*FPRVVKPAFSLTFL
Trigger: GAGAAATGTCAAACTGAACGCAGGTTTCACCACTCTAGGAAAGCAGCTTGTTGAGCCCCTGCAGCTGGATGTGGTTAGAGGGATGGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 90 bp AAATCTAACCTGCCTATTCAGCCCATCCCTCTAACCACATCCAGCTaGAGGGGCTCAACAAGCTGCTTTCCTAGAGTGGTGAAACCTGCG +
Preference number: 1 (lower is better)
Translates to: KSNLPIQPIPLTTSS*RGSTSCFPRVVKPA
Trigger: CGCAGGTTTCACCACTCTAGGAAAGCAGCTTGTTGAGCCCCTGCAGCTGGATGTGGTTAGAGGGATGGGCTGAATAGGCAGGTTAGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR TCA 90 bp ATACTGGCCCACATTCACGTTCACAGTAACAACAAAGGTGCTGAATaGGCAGCCTGTGGTTCCACATCCACCTGTCTCCTCCACTGTGGT +
Preference number: 1 (lower is better)
Translates to: ILAHIHVHSNNKGAE*AACGSTSTCLLHCG
Trigger: ACCACAGTGGAGGAGACAGGTGGATGTGGAACCACAGGCTGCTCATTCAGCACCTTTGTTGTTACTGTGAACGTGAATGTGGGCCAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 90 bp ACGGGAACAAGGCAAGCAGCTCTCAGATGGATGTGTATGTCTGACTaGACTTGTCAGAAACCCAGGTCCTTGCCTTCCACTTCCTATACC +
Preference number: 1 (lower is better)
Translates to: TGTRQAALRWMCMSD*TCQKPRSLPSTSYT
Trigger: GGTATAGGAAGTGGAAGGCAAGGACCTGGGTTTCTGACAAGTGCAGTCAGACATACACATCCATCTGAGAGCTGCTTGCCTTGTTCCCGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR GCA 90 bp TTCATGCAGGCACCAAAAAGCCACACGTGGTGGGTGACCCAAAGGTaGCTGCTCTGGGAACTTTCACATCTGAATAGGTGTCATCCTTCA +
Preference number: 1 (lower is better)
Translates to: FMQAPKSHTWWVTQR*LLWELSHLNRCHPS
Trigger: TGAAGGATGACACCTATTCAGATGTGAAAGTTCCCAGAGCAGGCACCTTTGGGTCACCCACCACGTGTGGCTTTTTGGTGCCTGCATGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR TCA 90 bp TCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCAAAGCACTGTTaGTGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCTCTAACC +
Preference number: 1 (lower is better)
Translates to: SLFFLRNPHSFPKHC*CRKSNLPIQPIPLT
Trigger: GGTTAGAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 90 bp GCACCAAAAAGCCACACGTGGTGGGTGACCCAAAGGTGCCTGCTCTaGGAACTTTCACATCTGAATAGGTGTCATCCTTCAATGGCATAT +
Preference number: 1 (lower is better)
Translates to: APKSHTWWVTQRCLL*ELSHLNRCHPSMAY
Trigger: ATATGCCATTGAAGGATGACACCTATTCAGATGTGAAAGTTCCCAGAGCAGGCACCTTTGGGTCACCCACCACGTGTGGCTTTTTGGTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR TCA 90 bp AGGGCCAAGGATTATGTAAGAATAGGGATTATATTTAGAGGACCTTaGAGAAACAACCATGCCCGGGGCAGAACTGTCCCCAGTGGCTGC +
Preference number: 1 (lower is better)
Translates to: RAKDYVRIGIIFRGP*RNNHARGRTVPSGC
Trigger: GCAGCCACTGGGGACAGTTCTGCCCCGGGCATGGTTGTTTCTTCAAGGTCCTCTAAATATAATCCCTATTCTTACATAATCCTTGGCCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR TCA 90 bp AAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCCTCTCTaGAGGTTTCTGTACCTGAGAAATGGGCACTTCCATGCCCACCTC +
Preference number: 1 (lower is better)
Translates to: KGFSPASTGQAIYPL*RFLYLRNGHFHAHL
Trigger: GAGGTGGGCATGGAAGTGCCCATTTCTCAGGTACAGAAACCTTCAGAGAGGATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 90 bp TGGCAGTCCAGTGTAGGCCGGGTAGAGTCCGTTTCGTTCAAGTTCTaGATTCCTTACACTTGTAGGCTTTATAAGGTCCTACGACCATCT +
Preference number: 1 (lower is better)
Translates to: WQSSVGRVESVSFKF*IPYTCRLYKVLRPS
Trigger: AGATGGTCGTAGGACCTTATAAAGCCTACAAGTGTAAGGAATCCAGAACTTGAACGAAACGGACTCTACCCGGCCTACACTGGACTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482699.1
3UTR CCA 90 bp TCTGAAAACAGTTCACAAAAATATGCTTCCAGTATGTGGGAGCCATaGCCTTACCACGGGAACAAGGCAAGCAGCTCTCAGATGGATGTG +
Preference number: 1 (lower is better)
Translates to: SENSSQKYASSMWEP*PYHGNKASSSQMDV
Trigger: CACATCCATCTGAGAGCTGCTTGCCTTGTTCCCGTGGTAAGGCCATGGCTCCCACATACTGGAAGCATATTTTTGTGAACTGTTTTCAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR CCA 90 bp GTTCCCAATTCTGAAAACAGTTCACAAAAATATGCTTCCAGTATGTaGGAGCCATGGCCTTACCACGGGAACAAGGCAAGCAGCTCTCAG +
Preference number: 1 (lower is better)
Translates to: VPNSENSSQKYASSM*EPWPYHGNKASSSQ
Trigger: CTGAGAGCTGCTTGCCTTGTTCCCGTGGTAAGGCCATGGCTCCCACATACTGGAAGCATATTTTTGTGAACTGTTTTCAGAATTGGGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR CCA 90 bp GAACTTTCACATCTGAATAGGTGTCATCCTTCAATGGCATATTCTTaGGTAGCCATCCAGCCTAGGAGTCCAAAGATGCTGCCTTCTCCC +
Preference number: 1 (lower is better)
Translates to: ELSHLNRCHPSMAYS*VAIQPRSPKMLPSP
Trigger: GGGAGAAGGCAGCATCTTTGGACTCCTAGGCTGGATGGCTACCCAAGAATATGCCATTGAAGGATGACACCTATTCAGATGTGAAAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR TCA 90 bp CCTTCCACTTCCTATACCAAAGCCACGTGCCAGTGTGCTTCTTGCTaGGCACAAGCCAGCCACTATTTTCTTAATGACAAGTGTCTAAGA +
Preference number: 1 (lower is better)
Translates to: PSTSYTKATCQCASC*AQASHYFLNDKCLR
Trigger: TCTTAGACACTTGTCATTAAGAAAATAGTGGCTGGCTTGTGCTCAGCAAGAAGCACACTGGCACGTGGCTTTGGTATAGGAAGTGGAAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR CCA 90 bp AAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTaGAACAGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAAT +
Preference number: 1 (lower is better)
Translates to: KLLPMEVSRERKPSF*NSLKTDPKGNLPPN
Trigger: ATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACTGTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR TCA 90 bp GCGCTGGGCAGGAAAATAATTAACAAGCCAGTATTTTGCTGCAAATaGATCACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAG +
Preference number: 1 (lower is better)
Translates to: ALGRKIINKPVFCCK*ITKLLPMEVSRERK
Trigger: CTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGTGATTCATTTGCAGCAAAATACTGGCTTGTTAATTATTTTCCTGCCCAGCGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 90 bp ACAAGCCAGTATTTTGCTGCAAATGAATCACCAAATTGCTGCCTATaGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACAGTCTCA +
Preference number: 1 (lower is better)
Translates to: TSQYFAANESPNCCL*KCLGKGSLLSGTVS
Trigger: TGAGACTGTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGTGATTCATTTGCAGCAAAATACTGGCTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 90 bp TTAATCCACTCCATACGGAAGAAACCCATGAACAAGAAGCATTGTTaGAACTCACAGGACACCGTTTTCTCGATGTTGGGATTCTTCCCA +
Preference number: 1 (lower is better)
Translates to: LIHSIRKKPMNKKHC*NSQDTVFSMLGFFP
Trigger: TGGGAAGAATCCCAACATCGAGAAAACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGTTCATGGGTTTCTTCCGTATGGAGTGGATTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR TCA 90 bp GAACCACCTATCAGCAATTTTGGCTCTAAATGTCTTAGCTGCTTCTaGAAATATACTTCCCCTCAAAGGAGGAAGATGTGTCAGCGTTTA +
Preference number: 1 (lower is better)
Translates to: EPPISNFGSKCLSCF*KYTSPQRRKMCQRL
Trigger: TAAACGCTGACACATCTTCCTCCTTTGAGGGGAAGTATATTTTCAGAAGCAGCTAAGACATTTAGAGCCAAAATTGCTGATAGGTGGTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR TCA 90 bp AATCGTCACATCTTAGTTTTTGACCTCAGATGCCATCAGCCAACTTaGCTGAACCACCTATCAGCAATTTTGGCTCTAAATGTCTTAGCT +
Preference number: 1 (lower is better)
Translates to: NRHILVFDLRCHQPT*LNHLSAILALNVLA
Trigger: AGCTAAGACATTTAGAGCCAAAATTGCTGATAGGTGGTTCAGTCAAGTTGGCTGATGGCATCTGAGGTCAAAAACTAAGATGTGACGATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR TCA 90 bp TTAAGAGTTACCTCTTTAAGAACTCAATCGTCACATCTTAGTTTTTaGCCTCAGATGCCATCAGCCAACTTGACTGAACCACCTATCAGC +
Preference number: 1 (lower is better)
Translates to: LRVTSLRTQSSHLSF*PQMPSANLTEPPIS
Trigger: GCTGATAGGTGGTTCAGTCAAGTTGGCTGATGGCATCTGAGGTCAAAAACTAAGATGTGACGATTGAGTTCTTAAAGAGGTAACTCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR CCA 90 bp ACAAGAAGCATTGTTGGAACTCACAGGACACCGTTTTCTCGATGTTaGGATTCTTCCCAAGAATGTTTTCAGGACAGAACACTTCATTTT +
Preference number: 1 (lower is better)
Translates to: TRSIVGTHRTPFSRC*DSSQECFQDRTLHF
Trigger: AAAATGAAGTGTTCTGTCCTGAAAACATTCTTGGGAAGAATCCCAACATCGAGAAAACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR TCA 90 bp AAACCAGTATCTCTATTTCCAAAAACACACATGAGAACCTCAGAATaGCACTTTGTTAAGGGAGGAAATGAAATGTCCCTTCTCATCCAC +
Preference number: 1 (lower is better)
Translates to: KPVSLFPKTHMRTSE*HFVKGGNEMSLLIH
Trigger: GTGGATGAGAAGGGACATTTCATTTCCTCCCTTAACAAAGTGTCATTCTGAGGTTCTCATGTGTGTTTTTGGAAATAGAGATACTGGTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR TCA 90 bp CCCTTTGGTTTCATAGGGTTTTCTGTGAGCAGTTTACACCAGATATaGTGGAGTATAACGCTAATGAAGATACTTTACTACAACAAATTA +
Preference number: 1 (lower is better)
Translates to: PFGFIGFSVSSLHQI*WSITLMKILYYNKL
Trigger: TAATTTGTTGTAGTAAAGTATCTTCATTAGCGTTATACTCCATCATATCTGGTGTAAACTGCTCACAGAAAACCCTATGAAACCAAAGGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR-3UTR CCA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCCTGTCTCCTCCACTGTaGTCACGCCCCGCATGCCTG +
Preference number: 2 (lower is better)
Translates to: SPRPRRDPSAARNPVQECLSPPL*SRPACL
Trigger: CAGGCATGCGGGGCGTGACCACAGTGGAGGAGACAG...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CAA 90 bp CTCCTCCACTGTGGTCACGCCCCGCATGCCTGTCCCTCTTCCTGCTaGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCT +
Preference number: 2 (lower is better)
Translates to: LLHCGHAPHACPSSC*PLSVAPDKSWAQPP
Trigger: AGGAGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGGAAGAGGGACAGGCATGCGGGGCGTGACCACAGTGGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCAGCAGAGGTCCCAGGTaGCTGGCTCAGAGCAATGAG +
Preference number: 2 (lower is better)
Translates to: SPRPRRDPSAARNPVQECSRGPR*LAQSNE
Trigger: CTCATTGCTCTGAGCCAGTCACCTGGGACCTCTGCT...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp AGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGAGCAACCTGGTGCGGTCCTCTaGGCAGAGGTCCCAGGTGAC +
Preference number: 2 (lower is better)
Translates to: SLLVRSSEQRSQVTGSEQPGAVL*AEVPGD
Trigger: GTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGG...TTGCTCTGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000482699.1
ENST00000487661.1
3UTR-3UTR GCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTAGACGGGACACACAGATaGCCCTGCGCCCGGCTCCTC +
Preference number: 2 (lower is better)
Translates to: DGEGCARTVRQGATVGRVDGTHR*PCARLL
Trigger: GAGGAGCCGGGCGCAGGGGCATCTGTGTGTCCCGTC...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp TGTCTGGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTAGCCTGTCCCTCTTCCTaGTTGCCACTCAGCGTGGCT +
Preference number: 2 (lower is better)
Translates to: CLGGEPRRARCASRPLLLACPSS*LPLSVA
Trigger: AGCCACGCTGAGTGGCAAGCAGGAAGAGGGACAGGC...TAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp TGTCTGGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTACCCCTTAGAGCCTCATaGTCTGGAGGTGCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: CLGGEPRRARCASRPLLLPLRAS*SGGAFP
Trigger: GGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGG...TAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCAGCTAGGAACCCCGTaGAGGAGTGCAGCTGGCCTC +
Preference number: 2 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGQLGTP*RSAAGL
Trigger: GAGGCCAGCTGCACTCCTGCACGGGGTTCCTAGCTG...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGGTCCCTCTTCCTGCTTaGCACTCAGCGTGGCTCCCG +
Preference number: 2 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGVPLPA*HSAWLP
Trigger: CGGGAGCCACGCTGAGTGGCAAGCAGGAAGAGGGAC...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGGTGCCAGTGCCATGGTaGAGTCACTCAGAGAGACTC +
Preference number: 2 (lower is better)
Translates to: GRRASACQVCIQASSAIRVPVPW*SHSERL
Trigger: GAGTCTCTCTGAGTGACTGCACCATGGCACTGGCAC...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTTGGTCACGCCCCGCATaGCTGTCCCTCTTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: RARCASRPLLLSGVSPRPWSRPA*LSLFLL
Trigger: AAGCAGGAAGAGGGACAGGCATGCGGGGCGTGACCA...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTACCCCTTAGAGCCTCATaGTCTGGAGGTGCCTTCCCC +
Preference number: 2 (lower is better)
Translates to: DGEGCARTVRQGATVGRVPLRAS*SGGAFP
Trigger: GGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGG...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCGAGGTCCCAGGTGACTaGCTCAGAGCAATGAGTCCC +
Preference number: 2 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGEVPGD*LRAMSP
Trigger: GGGACTCATTGCTCTGAGCCAGTCACCTGGGACCTC...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGGCTCCCGACAAATCCTaGGCGCAGCCTCCTGGTGCG +
Preference number: 2 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWAPDKS*AQPPGA
Trigger: CGCACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGC...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp TGTCTGGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTACCCCCAAACGCCTCCTaGAAACTGTGGAGACTGTGT +
Preference number: 2 (lower is better)
Translates to: CLGGEPRRARCASRPLLLPPNAS*KLWRLC
Trigger: ACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGG...TAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTAGTGCAGGAGTGCAGCTaGCCTCTCCCTTCCTCACTG +
Preference number: 2 (lower is better)
Translates to: DGEGCARTVRQGATVGRVVQECS*PLPSSL
Trigger: CAGTGAGGAAGGGAGAGGCCAGCTGCACTCCTGCAC...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTATCCAGGGCCTTAGGCTaGCTCAAGGGGCAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: DGEGCARTVRQGATVGRVSRALG*LKGQRK
Trigger: TTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGA...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTCTAACCACATCCAGCTaGAGGGGCTCAACAAGCTGC +
Preference number: 2 (lower is better)
Translates to: RARCASRPLLLSGVSPRPLTTSS*RGSTSC
Trigger: GCAGCTTGTTGAGCCCCTGCAGCTGGATGTGGTTAG...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGGGACACAGGAGTTCTTaGTTAAAACCATCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: GRRASACQVCIQASSAIRGHRSS*LKPSGP
Trigger: TGGCCCTGATGGTTTTAAGCAAGAACTCCTGTGTCC...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGGGTGAGCAGGCATGCTaGGGAAGGAGCCAAGAAGCC +
Preference number: 2 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWGEQAC*GRSQEA
Trigger: GGCTTCTTGGCTCCTTCCGCAGCATGCCTGCTCACC...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCAGCTTGCCACTCAGCGTaGCTCCCGACAAATCCTGGG +
Preference number: 2 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPACHSA*LPTNPG
Trigger: CCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGC...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGGCTTGCCACTCAGCGTaGCTCCCGACAAATCCTGGG +
Preference number: 2 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWACHSA*LPTNPG
Trigger: CCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGC...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCCTCACTGTGGGGGCTaGCTTGGAAACTGTAGCATA +
Preference number: 2 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGPHCGG*LGNCSI
Trigger: TATGCTACAGTTTCCAAGCCAGCCCCCACAGTGAGG...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCGCCTCCTGGAAACTGTaGAGACTGTGTGACCTCAAC +
Preference number: 2 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGASWKL*RLCDLN
Trigger: GTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGC...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCTCAGAGAGACTCTCTTaGTACTGGCCCACATTCACG +
Preference number: 2 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGSERLS*YWPTFT
Trigger: CGTGAATGTGGGCCAGTATCAAGAGAGTCTCTCTGA...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGACCCTGCTGCAGTGTGTaGCGGGACACACAGATGCCC +
Preference number: 2 (lower is better)
Translates to: PKETDSRALGWLKGQRKRPCCSV*RDTQMP
Trigger: GGGCATCTGTGTGTCCCGTCACACACTGCAGCAGGG...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCGGCGCAGCCTCCTGGTaGGGTCCTCTGAGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: SSDFSGTLILICCLARRRGAASW*GPLSRG
Trigger: ACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCC...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTTCGCCCTGGTGCCAGTaGCATGGTGCAGTCACTCAG +
Preference number: 2 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETSPWCQ*HGAVTQ
Trigger: CTGAGTGACTGCACCATGGCACTGGCACCAGGGCGA...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp CATCACTTGCCCCTTCCTCTCACCTTCCCCCATCTGTGGGATATTGGTGCAGGATCGCCCTGGTGCCAGTaGCATGGTGCAGTCACTCAG +
Preference number: 2 (lower is better)
Translates to: HHLPLPLTFPHLWDIGAGSPWCQ*HGAVTQ
Trigger: CTGAGTGACTGCACCATGGCACTGGCACCAGGGCGA...TCCTGCACCAATATCCCACAGATGGGGGAAGGTGAGAGGAAGGGGCAAGTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp TGTCTGGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTAGGACACAGGAGTTCTTaGTTAAAACCATCAGGGCCA +
Preference number: 2 (lower is better)
Translates to: CLGGEPRRARCASRPLLLGHRSS*LKPSGP
Trigger: TGGCCCTGATGGTTTTAAGCAAGAACTCCTGTGTCC...TAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTCACATTTCCTCACTGTaGGGGCTGGCTTGGAAACTG +
Preference number: 2 (lower is better)
Translates to: RARCASRPLLLSGVSPRPHISSL*GLAWKL
Trigger: CAGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTG...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGAATGGAGCACTGTGTCTaGGCGGAGAGCCTCGGCGTG +
Preference number: 2 (lower is better)
Translates to: PKETDSRALGWLKGQRKRMEHCV*AESLGV
Trigger: CACGCCGAGGCTCTCCGCCCAGACACAGTGCTCCAT...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACACTGGCTCAGAGCAATaGGTCCCTCTCTCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHTGSEQ*VPLSPG
Trigger: TCCAGGAGAGAGAGGGACTCATTGCTCTGAGCCAGT...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTAACAAAGGTGCTGAATaGGCAGCCTGTGGTTCCACA +
Preference number: 2 (lower is better)
Translates to: RARCASRPLLLSGVSPRPNKGAE*AACGST
Trigger: TGTGGAACCACAGGCTGCTCATTCAGCACCTTTGTT...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp TGTCTGGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATTCATTTTGTGGAGCTaGAGTCTTCTGGCTCCGATA +
Preference number: 2 (lower is better)
Translates to: CLGGEPRRARCASRPLLLFILWS*SLLAPI
Trigger: TATCGGAGCCAGAAGACTTCAGCTCCACAAAATGAA...TAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTTGCAGTTGTGTGCGGTaGCTCACACATTTCCTCACT +
Preference number: 2 (lower is better)
Translates to: RARCASRPLLLSGVSPRPCSCVR*LTHFLT
Trigger: AGTGAGGAAATGTGTGAGGCACCGCACACAACTGCA...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCCTCATGGATGAAAAGTaGCCCCCTGCCTGCAATCTG +
Preference number: 2 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPLMDEK*PPACNL
Trigger: CAGATTGCAGGCAGGGGGGCACTTTTCATCCATGAG...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp GTTCCCCAGGTGGCAATTAAAGACACCGAGTACTGGATGTCTCCCTGGCAGGACTCCTCCATACGCAGCTaGCTCTGGCCTCCACAATGG +
Preference number: 2 (lower is better)
Translates to: VPQVAIKDTEYWMSPWQDSSIRS*LWPPQW
Trigger: CCATTGTGGAGGCCAGAGGCAGCTGCGTATGGAGGA...GTCCTGCCAGGGAGACATCCAGTACTCGGTGTCTTTAATTGCCACCTGGGGAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGATCGGCGTGCCAGGTGTaGATCCAGGCCTCTTCTGCT +
Preference number: 2 (lower is better)
Translates to: PKETDSRALGWLKGQRKRSACQV*IQASSA
Trigger: AGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGA...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCCTGGGCGCAGCCTCCTaGTGCGGTCCTCTGAGCAGA +
Preference number: 2 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFILGAAS*CGPLSR
Trigger: TCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCCAG...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCCTGTCTCCTCCACTGTaGTCACGCCCCGCATGCCTG +
Preference number: 2 (lower is better)
Translates to: SSDFSGTLILICCLARRRLSPPL*SRPACL
Trigger: CAGGCATGCGGGGCGTGACCACAGTGGAGGAGACAG...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCATCTAGTGGTCTGCCCTaGCTAATAGTCGCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPSSGLP*LIVALV
Trigger: CACCAGGGCGACTATTAGCCAGGGCAGACCACTAGA...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGTACTGGATGTCTCCCTaGCAGGACCCACATCACAGG +
Preference number: 2 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWYWMSP*QDPHHR
Trigger: CCTGTGATGTGGGTCCTGCCAGGGAGACATCCAGTA...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGCAGGGTGATGGTGAGTaGTGGAGACCATGGGACACA +
Preference number: 2 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWQGDGE*WRPWDT
Trigger: TGTGTCCCATGGTCTCCACCACTCACCATCACCCTG...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGAACAAGAAGCATTGTTaGAACTCACAGGACACCGTT +
Preference number: 2 (lower is better)
Translates to: GRRASACQVCIQASSAIRNKKHC*NSQDTV
Trigger: AACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGTT...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTGTGCCAGTGCCATGGTaGAGTCACTCAGAGAGACTC +
Preference number: 2 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETVPVPW*SHSERL
Trigger: GAGTCTCTCTGAGTGACTGCACCATGGCACTGGCAC...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCAGCTCCCGACAAATCCTaGGCGCAGCCTCCTGGTGCG +
Preference number: 2 (lower is better)
Translates to: PHLLFSTQALGRKIINKPAPDKS*AQPPGA
Trigger: CGCACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGC...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGCCAAATTGCTGCCTATaGAAGTGTCTCGGGAAAGGA +
Preference number: 2 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGPNCCL*KCLGKG
Trigger: TCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGG...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp ACTGTCCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCCTCACTGTGGGGGCTaGCTTGGAAACTGTAGCATA +
Preference number: 2 (lower is better)
Translates to: TVPSGCTISRNVKRDSPLPHCGG*LGNCSI
Trigger: TATGCTACAGTTTCCAAGCCAGCCCCCACAGTGAGG...AAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGGACAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTAACACAGTTCCCCAGGTaGCAATTAAAGACACCGAGT +
Preference number: 2 (lower is better)
Translates to: DGEGCARTVRQGATVGRVTQFPR*QLKTPS
Trigger: ACTCGGTGTCTTTAATTGCCACCTGGGGAACTGTGT...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCGTGCAGGGGCTGACATaGAGCACTGTGTCTGGGCGG +
Preference number: 2 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFIVQGLT*STVSGR
Trigger: CCGCCCAGACACAGTGCTCCATGTCAGCCCCTGCAC...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp AAGACGGGTTATACTGTCCGGGGAAAATGCAAGAATGCCGTGATCCTGGCAGTCAGCAGAGGTCCCAGGTaGCTGGCTCAGAGCAATGAG +
Preference number: 2 (lower is better)
Translates to: KTGYTVRGKCKNAVILAVSRGPR*LAQSNE
Trigger: CTCATTGCTCTGAGCCAGTCACCTGGGACCTCTGCT...GACTGCCAGGATCACGGCATTCTTGCATTTTCCCCGGACAGTATAACCCGTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482699.1
3UTR-3UTR GCA 90 bp ACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACGTCCCTCTTCCTGCTTaGCACTCAGCGTGGCTCCCG +
Preference number: 2 (lower is better)
Translates to: TKLLPMEVSRERKPSFWNVPLPA*HSAWLP
Trigger: CGGGAGCCACGCTGAGTGGCAAGCAGGAAGAGGGAC...GTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTAACTGGGTCACAGACATaGTTTACTCATGTCCCCTTA +
Preference number: 2 (lower is better)
Translates to: DGEGCARTVRQGATVGRVTGSQT*FTHVPL
Trigger: TAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGT...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCACACACAGATGCCCCTaGGCCCGGCTCCTCTCTATG +
Preference number: 2 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFITHRCP*ARLLSM
Trigger: CATAGAGAGGAGCCGGGCGCAGGGGCATCTGTGTGT...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCGAGGTCCCAGGTGACTaGCTCAGAGCAATGAGTCCC +
Preference number: 2 (lower is better)
Translates to: SSDFSGTLILICCLARRREVPGD*LRAMSP
Trigger: GGGACTCATTGCTCTGAGCCAGTCACCTGGGACCTC...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTATCTTCAGACTTCAGTaGTACGCTCATCCTCATCTG +
Preference number: 2 (lower is better)
Translates to: RARCASRPLLLSGVSPRPIFRLQ*YAHPHL
Trigger: CAGATGAGGATGAGCGTACCACTGAAGTCTGAAGAT...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTAACACTGTCCGTTCAATaGCGACATCTTCAGACTTCA +
Preference number: 2 (lower is better)
Translates to: DGEGCARTVRQGATVGRVTLSVQ*RHLQTS
Trigger: TGAAGTCTGAAGATGTCGCCATTGAACGGACAGTGT...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCTCCCAGGCCCCAGGCTaGGCCCTCATGGATGAAAAG +
Preference number: 2 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSSQAPG*ALMDEK
Trigger: CTTTTCATCCATGAGGGCCCAGCCTGGGGCCTGGGA...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTGTGGACATGAGATTCTaGGTACAAAGTGCTGCAGTA +
Preference number: 2 (lower is better)
Translates to: RARCASRPLLLSGVSPRPVDMRF*VQSAAV
Trigger: TACTGCAGCACTTTGTACCCAGAATCTCATGTCCAC...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGCAGAACTGTCCCCAGTaGCTGCACCATTTCCAGAAA +
Preference number: 2 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWQNCPQ*LHHFQK
Trigger: TTTCTGGAAATGGTGCAGCCACTGGGGACAGTTCTG...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCCGTTTTCTCGATGTTaGGATTCTTCCCAAGAATGT +
Preference number: 2 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGPFSRC*DSSQEC
Trigger: ACATTCTTGGGAAGAATCCCAACATCGAGAAAACGG...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CAA 90 bp CAGAACTCTCCAGTTAGGTGCGAGGCCGTGAGCCACAAAGGGCCATaGGTTCTACAGAGAGAGAGGCCCAAGATTTCAAAAAGGCGACAC +
Preference number: 2 (lower is better)
Translates to: QNSPVRCEAVSHKGP*VLQRERPKISKRRH
Trigger: GTGTCGCCTTTTTGAAATCTTGGGCCTCTCTCTCTGTAGAACCAATGGCCCTTTGTGGCTCACGGCCTCGCACCTAACTGGAGAGTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCACTGGCTCAGAGCAATaGGTCCCTCTCTCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: SSDFSGTLILICCLARRRTGSEQ*VPLSPG
Trigger: TCCAGGAGAGAGAGGGACTCATTGCTCTGAGCCAGT...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCTTCCCAAAGCACTGTTaGTGCAGGAAATCTAACCTG +
Preference number: 2 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPFPKHC*CRKSNL
Trigger: CAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAA...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCAAAAAGGCGACACTTTaGAATTTTAGGTTAGCCTCC +
Preference number: 2 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGKKATL*NFRLAS
Trigger: GGAGGCTAACCTAAAATTTCAAAGTGTCGCCTTTTT...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTATACGGAAGAAACCCATaGACAAGAAGCATTGTTGGA +
Preference number: 2 (lower is better)
Translates to: DGEGCARTVRQGATVGRVYGRNP*TRSIVG
Trigger: TCCAACAATGCTTCTTGTTCATGGGTTTCTTCCGTA...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp TCTGCTTTCATCACTGATGAAAGACGGGTTATACTGTCCGGGGAAAATGCAAGAGGCGCAGCCTCCTGGTaGGGTCCTCTGAGCAGAGGT +
Preference number: 2 (lower is better)
Translates to: SAFITDERRVILSGENARGAASW*GPLSRG
Trigger: ACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCC...TCTTGCATTTTCCCCGGACAGTATAACCCGTCTTTCATCAGTGATGAAAGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482699.1
3UTR-3UTR GCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCATGGTCACGCCCCGCATaGCTGTCCCTCTTCCTGCTT +
Preference number: 2 (lower is better)
Translates to: PHLLFSTQALGRKIINKPWSRPA*LSLFLL
Trigger: AAGCAGGAAGAGGGACAGGCATGCGGGGCGTGACCA...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp ACTGTCCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTGAATCACCAAATTGCTaGCTATGGAAGTGTCTCGGG +
Preference number: 2 (lower is better)
Translates to: TVPSGCTISRNVKRDSPLESPNC*LWKCLG
Trigger: CCCGAGACACTTCCATAGGCAGCAATTTGGTGATTC...AAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACAGGGGCTCAACAAGCTaGTTTCCTAGAGTGGTGAAA +
Preference number: 2 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHRGSTS*FPRVVK
Trigger: TTTCACCACTCTAGGAAAGCAGCTTGTTGAGCCCCT...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGAAACTCTCCAGTTAGGTaGGAGGCCGTGAGCCACAAA +
Preference number: 2 (lower is better)
Translates to: PKETDSRALGWLKGQRKRNSPVR*EAVSHK
Trigger: TTTGTGGCTCACGGCCTCGCACCTAACTGGAGAGTT...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp GGCCGGGTAGAGTCCGTTTCGTTCAAGTTCTGGATTCCTTACACTTGTAGGCTTGAGGTCCCAGGTGACTaGCTCAGAGCAATGAGTCCC +
Preference number: 2 (lower is better)
Translates to: GRVESVSFKFWIPYTCRLEVPGD*LRAMSP
Trigger: GGGACTCATTGCTCTGAGCCAGTCACCTGGGACCTC...AAGCCTACAAGTGTAAGGAATCCAGAACTTGAACGAAACGGACTCTACCCGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482699.1
3UTR-3UTR CCA 90 bp TGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCTCTAACCACATCCAGCTGCCTGGTGCCAGTGCCATaGTGCAGTCACTCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: CRKSNLPIQPIPLTTSSCLVPVP*CSHSER
Trigger: TCTCTCTGAGTGACTGCACCATGGCACTGGCACCAG...GCAGCTGGATGTGGTTAGAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGAGAGTGGTGGAGACCATaGGACACAGGAGTTCTTGCT +
Preference number: 2 (lower is better)
Translates to: PKETDSRALGWLKGQRKREWWRP*DTGVLA
Trigger: AGCAAGAACTCCTGTGTCCCATGGTCTCCACCACTC...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp GTAGGCCGGGTAGAGTCCGTTTCGTTCAAGTTCTGGATTCCTTACACTTGTAGGACTGGCTCAGAGCAATaGGTCCCTCTCTCTCCTGGA +
Preference number: 2 (lower is better)
Translates to: VGRVESVSFKFWIPYTCRTGSEQ*VPLSPG
Trigger: TCCAGGAGAGAGAGGGACTCATTGCTCTGAGCCAGT...CCTACAAGTGTAAGGAATCCAGAACTTGAACGAAACGGACTCTACCCGGCCTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482699.1
3UTR-3UTR TCA 90 bp CATCACTTGCCCCTTCCTCTCACCTTCCCCCATCTGTGGGATATTGGTGCAGGATGGGGTTTGTGGACATaGGATTCTGGGTACAAAGTG +
Preference number: 2 (lower is better)
Translates to: HHLPLPLTFPHLWDIGAGWGLWT*DSGYKV
Trigger: CACTTTGTACCCAGAATCTCATGTCCACAAACCCCA...TCCTGCACCAATATCCCACAGATGGGGGAAGGTGAGAGGAAGGGGCAAGTGATG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp ACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGTGGAGACAATTCTCTCATGGATGAAAAGTaGCCCCCTGCCTGCAATCTG +
Preference number: 2 (lower is better)
Translates to: TISRNVKRDSPLQGGDNSLMDEK*PPACNL
Trigger: CAGATTGCAGGCAGGGGGGCACTTTTCATCCATGAG...AGAATTGTCTCCACCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp AGCCTTGCCCAGAGCCTGGTCATGGTAGGAGCATGTCAGTTCATCCGCCTAAAGTCTGTGGGATATTGGTaGAGGATTGTGGCATCTGTG +
Preference number: 2 (lower is better)
Translates to: SLAQSLVMVGACQFIRLKSVGYW*RIVASV
Trigger: CACAGATGCCACAATCCTGCACCAATATCCCACAGA...CTTTAGGCGGATGAACTGACATGCTCCTACCATGACCAGGCTCTGGGCAAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCTACTGTGAGGAGCCTTaGCCAGAGCCTGGTCATGGT +
Preference number: 2 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFIYCEEP*PEPGHG
Trigger: ACCATGACCAGGCTCTGGGCAAGGCTCCTCACAGTA...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGAGGAAGCCTTCTTTCTaGAACAGTCTCAAAACAGAT +
Preference number: 2 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGRKPSF*NSLKTD
Trigger: ATCTGTTTTGAGACTGTTCCAGAAAGAAGGCTTCCT...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCAACAAGAAGCATTGTTaGAACTCACAGGACACCGTT +
Preference number: 2 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPNKKHC*NSQDTV
Trigger: AACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGTT...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGCCGAATAAACAGCTTTaGGTGGTTGAAAGTTTACAT +
Preference number: 2 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGPNKQL*VVESLH
Trigger: ATGTAAACTTTCAACCACTCAAAGCTGTTTATTCGG...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGAGAATCACCAAATTGCTaGCTATGGAAGTGTCTCGGG +
Preference number: 2 (lower is better)
Translates to: PKETDSRALGWLKGQRKRESPNC*LWKCLG
Trigger: CCCGAGACACTTCCATAGGCAGCAATTTGGTGATTC...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp ACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGTGGAGACAATTCTTGCAGTTGTGTGCGGTaGCTCACACATTTCCTCACT +
Preference number: 2 (lower is better)
Translates to: TISRNVKRDSPLQGGDNSCSCVR*LTHFLT
Trigger: AGTGAGGAAATGTGTGAGGCACCGCACACAACTGCA...AGAATTGTCTCCACCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp ACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGTGGAGACAATTCTGCAGGAAATCTAACCTaGCTATTCAGCCCATCCCTC +
Preference number: 2 (lower is better)
Translates to: TISRNVKRDSPLQGGDNSAGNLT*LFSPSL
Trigger: GAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGC...AGAATTGTCTCCACCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCACTGGTGCCAGTGCCATaGTGCAGTCACTCAGAGAGA +
Preference number: 2 (lower is better)
Translates to: PHLLFSTQALGRKIINKPLVPVP*CSHSER
Trigger: TCTCTCTGAGTGACTGCACCATGGCACTGGCACCAG...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp GTTCCCCAGGTGGCAATTAAAGACACCGAGTACTGGATGTCTCCCTGGCAGGACATCTTCAGACTTCAGTaGTACGCTCATCCTCATCTG +
Preference number: 2 (lower is better)
Translates to: VPQVAIKDTEYWMSPWQDIFRLQ*YAHPHL
Trigger: CAGATGAGGATGAGCGTACCACTGAAGTCTGAAGAT...GTCCTGCCAGGGAGACATCCAGTACTCGGTGTCTTTAATTGCCACCTGGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp AGCCTTGCCCAGAGCCTGGTCATGGTAGGAGCATGTCAGTTCATCCGCCTAAAGACACTGTCCGTTCAATaGCGACATCTTCAGACTTCA +
Preference number: 2 (lower is better)
Translates to: SLAQSLVMVGACQFIRLKTLSVQ*RHLQTS
Trigger: TGAAGTCTGAAGATGTCGCCATTGAACGGACAGTGT...CTTTAGGCGGATGAACTGACATGCTCCTACCATGACCAGGCTCTGGGCAAGGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CAA 90 bp CATTTTGTGGAGCTGAAGTCTTCTGGCTCCGATAGAGGAGATGATTaGTCAGCTGTGACGTCAGCTGAAGGCAGTGGAAGTGTATGCCTG +
Preference number: 2 (lower is better)
Translates to: HFVELKSSGSDRGDD*SAVTSAEGSGSVCL
Trigger: CAGGCATACACTTCCACTGCCTTCAGCTGACGTCACAGCTGACAAATCATCTCCTCTATCGGAGCCAGAAGACTTCAGCTCCACAAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCAACAAAGGTGCTGAATaGGCAGCCTGTGGTTCCACA +
Preference number: 2 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSNKGAE*AACGST
Trigger: TGTGGAACCACAGGCTGCTCATTCAGCACCTTTGTT...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp ACTGTCCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCCCAATTTACTAAAGTaGAAACGAAGGGAAAACCAG +
Preference number: 2 (lower is better)
Translates to: TVPSGCTISRNVKRDSPLPNLLK*KRRENQ
Trigger: CTGGTTTTCCCTTCGTTTGCACTTTAGTAAATTGGG...AAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACAATGAATCACCAAATTaGTGCCTATGGAAGTGTCTC +
Preference number: 2 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHNESPN*CLWKCL
Trigger: GAGACACTTCCATAGGCAGCAATTTGGTGATTCATT...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCCCCGGCTCCTCTCTATaGAGGTTTAAGCATCTCTTG +
Preference number: 2 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFIPGSSL*RFKHLL
Trigger: CAAGAGATGCTTAAACCTCCATAGAGAGGAGCCGGG...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp TTAAAAGTAGTCTCTTCTTCTGCTTTCATCACTGATGAAAGACGGGTTATACTGCCTGGTGCGGTCCTCTaGGCAGAGGTCCCAGGTGAC +
Preference number: 2 (lower is better)
Translates to: LKVVSSSAFITDERRVILPGAVL*AEVPGD
Trigger: GTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGG...CAGTATAACCCGTCTTTCATCAGTGATGAAAGCAGAAGAAGAGACTACTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482699.1
3UTR-3UTR GCA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCAGGGGCTCAACAAGCTaGTTTCCTAGAGTGGTGAAA +
Preference number: 2 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSRGSTS*FPRVVK
Trigger: TTTCACCACTCTAGGAAAGCAGCTTGTTGAGCCCCT...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp TTAAAAGTAGTCTCTTCTTCTGCTTTCATCACTGATGAAAGACGGGTTATACTGCTGGGCGCAGCCTCCTaGTGCGGTCCTCTGAGCAGA +
Preference number: 2 (lower is better)
Translates to: LKVVSSSAFITDERRVILLGAAS*CGPLSR
Trigger: TCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCCAG...CAGTATAACCCGTCTTTCATCAGTGATGAAAGCAGAAGAAGAGACTACTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482699.1
3UTR-3UTR CCA 90 bp GAAACCCATGAACAAGAAGCATTGTTGGAACTCACAGGACACCGTTTTCTCGATCAGGGTGATGGTGAGTaGTGGAGACCATGGGACACA +
Preference number: 2 (lower is better)
Translates to: ETHEQEALLELTGHRFLDQGDGE*WRPWDT
Trigger: TGTGTCCCATGGTCTCCACCACTCACCATCACCCTG...ATCGAGAAAACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGTTCATGGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGACCGTTTTCTCGATGTTaGGATTCTTCCCAAGAATGT +
Preference number: 2 (lower is better)
Translates to: PKETDSRALGWLKGQRKRPFSRC*DSSQEC
Trigger: ACATTCTTGGGAAGAATCCCAACATCGAGAAAACGG...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CAA 90 bp AATGGCGACATCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTaGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCA +
Preference number: 2 (lower is better)
Translates to: NGDIFRLQWYAHPHL*FSTQALGRKIINKP
Trigger: TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGATGTCGCCATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp ACTGGGTCACAGACATGCTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGACAGCTTTGAGTGGTTaGAAGTTTACATGGGGTTTG +
Preference number: 2 (lower is better)
Translates to: TGSQTCFTHVPLEPHALETALSG*KFTWGL
Trigger: CAAACCCCATGTAAACTTTCAACCACTCAAAGCTGT...CTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp GTTCCCCAGGTGGCAATTAAAGACACCGAGTACTGGATGTCTCCCTGGCAGGACCCGAATAAACAGCTTTaGGTGGTTGAAAGTTTACAT +
Preference number: 2 (lower is better)
Translates to: VPQVAIKDTEYWMSPWQDPNKQL*VVESLH
Trigger: ATGTAAACTTTCAACCACTCAAAGCTGTTTATTCGG...GTCCTGCCAGGGAGACATCCAGTACTCGGTGTCTTTAATTGCCACCTGGGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCAAAATATAAGTTGTTTTaGCCTGATCCAGGCTTGTTT +
Preference number: 2 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPKYKLF*PDPGLF
Trigger: AAACAAGCCTGGATCAGGGCAAAACAACTTATATTT...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp GAAACCCATGAACAAGAAGCATTGTTGGAACTCACAGGACACCGTTTTCTCGATGGCAGTGGAAGTGTATaGCTGGGAATAGCCTCCCTA +
Preference number: 2 (lower is better)
Translates to: ETHEQEALLELTGHRFLDGSGSV*LGIASL
Trigger: TAGGGAGGCTATTCCCAGGCATACACTTCCACTGCC...ATCGAGAAAACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGTTCATGGGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCACCAAATTGCTGCCTATaGAAGTGTCTCGGGAAAGGA +
Preference number: 2 (lower is better)
Translates to: PHLLFSTQALGRKIINKPPNCCL*KCLGKG
Trigger: TCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGG...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp ACTGGGTCACAGACATGCTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGTTCTCCCACACTGACTaGAAGTATAACCACGTTTCT +
Preference number: 2 (lower is better)
Translates to: TGSQTCFTHVPLEPHALEFSHTD*KYNHVS
Trigger: AGAAACGTGGTTATACTTCCAGTCAGTGTGGGAGAA...CTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAAACCAGGTCCCTGCACTaGAGTCTAGTGGTCTGCCCT +
Preference number: 2 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKTRSLH*SLVVCP
Trigger: AGGGCAGACCACTAGACTTCAGTGCAGGGACCTGGT...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp ACTGGGTCACAGACATGCTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGAAAAAGGCGACACTTTaGAATTTTAGGTTAGCCTCC +
Preference number: 2 (lower is better)
Translates to: TGSQTCFTHVPLEPHALEKKATL*NFRLAS
Trigger: GGAGGCTAACCTAAAATTTCAAAGTGTCGCCTTTTT...CTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCGGTTTAAGCATCTCTTaGGCAGTTACACATCACTTG +
Preference number: 2 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFIGLSIS*AVTHHL
Trigger: CAAGTGATGTGTAACTGCTCAAGAGATGCTTAAACC...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGAATAAACAGCTTTGAGTaGTTGAAAGTTTACATGGGG +
Preference number: 2 (lower is better)
Translates to: PKETDSRALGWLKGQRKRINSFE*LKVYMG
Trigger: CCCCATGTAAACTTTCAACCACTCAAAGCTGTTTAT...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp ACTGGGTCACAGACATGCTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGCAACCTAGAAACATATaGAAACACTGTCCGTTCAAT +
Preference number: 2 (lower is better)
Translates to: TGSQTCFTHVPLEPHALEQPRNI*KHCPFN
Trigger: ATTGAACGGACAGTGTTTTCATATGTTTCTAGGTTG...CTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR TCA 90 bp ACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGTGGAGACAATTCTCAACCTAGAAACATATaGAAACACTGTCCGTTCAAT +
Preference number: 2 (lower is better)
Translates to: TISRNVKRDSPLQGGDNSQPRNI*KHCPFN
Trigger: ATTGAACGGACAGTGTTTTCATATGTTTCTAGGTTG...AGAATTGTCTCCACCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCCCCAATTTACTAAAGTaGAAACGAAGGGAAAACCAG +
Preference number: 2 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFIPNLLK*KRRENQ
Trigger: CTGGTTTTCCCTTCGTTTGCACTTTAGTAAATTGGG...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAATCTAGTGGTCTGCCCTaGCTAATAGTCGCCCTGGTG +
Preference number: 2 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKSSGLP*LIVALV
Trigger: CACCAGGGCGACTATTAGCCAGGGCAGACCACTAGA...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp ACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGTGGAGACAATTCTAAATATAAGTTGTTTTaGCCTGATCCAGGCTTGTTT +
Preference number: 2 (lower is better)
Translates to: TISRNVKRDSPLQGGDNSKYKLF*PDPGLF
Trigger: AAACAAGCCTGGATCAGGGCAAAACAACTTATATTT...AGAATTGTCTCCACCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCAAGGAAGCCTTCTTTCTaGAACAGTCTCAAAACAGAT +
Preference number: 2 (lower is better)
Translates to: PHLLFSTQALGRKIINKPRKPSF*NSLKTD
Trigger: ATCTGTTTTGAGACTGTTCCAGAAAGAAGGCTTCCT...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CAA 90 bp ACTCTTAATCCACTCCATACGGAAGAAACCCATGAACAAGAAGCATaGTTGGAACTCACAGGACACCGTTTTCTCGATGTTGGGATTCTT +
Preference number: 2 (lower is better)
Translates to: TLNPLHTEETHEQEA*LELTGHRFLDVGIL
Trigger: AAGAATCCCAACATCGAGAAAACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGTTCATGGGTTTCTTCCGTATGGAGTGGATTAAGAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp TATTTCTTCAGCCGAATAAACAGCTTTGAGTGGTTGAAAGTTTACATGGGGTTTCACATTTCCTCACTGTaGGGGCTGGCTTGGAAACTG +
Preference number: 2 (lower is better)
Translates to: YFFSRINSFEWLKVYMGFHISSL*GLAWKL
Trigger: CAGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTG...AAACCCCATGTAAACTTTCAACCACTCAAAGCTGTTTATTCGGCTGAAGAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CCA 90 bp TCTGCTTTCATCACTGATGAAAGACGGGTTATACTGTCCGGGGAAAATGCAAGAGTTTCGTTCAAGTTCTaGATTCCTTACACTTGTAGG +
Preference number: 2 (lower is better)
Translates to: SAFITDERRVILSGENARVSFKF*IPYTCR
Trigger: CCTACAAGTGTAAGGAATCCAGAACTTGAACGAAAC...TCTTGCATTTTCCCCGGACAGTATAACCCGTCTTTCATCAGTGATGAAAGCAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482699.1
3UTR-3UTR TCA 90 bp TATTTCTTCAGCCGAATAAACAGCTTTGAGTGGTTGAAAGTTTACATGGGGTTTTTCCCAAAGCACTGTTaGTGCAGGAAATCTAACCTG +
Preference number: 2 (lower is better)
Translates to: YFFSRINSFEWLKVYMGFFPKHC*CRKSNL
Trigger: CAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAA...AAACCCCATGTAAACTTTCAACCACTCAAAGCTGTTTATTCGGCTGAAGAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR GCA 90 bp TATTTCTTCAGCCGAATAAACAGCTTTGAGTGGTTGAAAGTTTACATGGGGTTTAATGAATCACCAAATTaGTGCCTATGGAAGTGTCTC +
Preference number: 2 (lower is better)
Translates to: YFFSRINSFEWLKVYMGFNESPN*CLWKCL
Trigger: GAGACACTTCCATAGGCAGCAATTTGGTGATTCATT...AAACCCCATGTAAACTTTCAACCACTCAAAGCTGTTTATTCGGCTGAAGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 72 bp GTGGTCACGCCCCGCATGCCTGTCCCTCTTCCTGCTTaGCACTCAGCGTGGCTCCCGACAAATCCTGGGCGC +
Preference number: 3 (lower is better)
Translates to: VVTPRMPVPLPA*HSAWLPTNPGR
Trigger: GCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGGAAGAGGGACAGGCATGCGGGGCGTGACCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 72 bp AGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTaGTATCAGGTGTTTCCCCTCGGCCTAGGCGGGACC +
Preference number: 3 (lower is better)
Translates to: SLGVPGVHPGLF*YQVFPLGLGGT
Trigger: GGTCCCGCCTAGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 72 bp CGCATGCCTGTCCCTCTTCCTGCTTGCCACTCAGCGTaGCTCCCGACAAATCCTGGGCGCAGCCTCCTGGTG +
Preference number: 3 (lower is better)
Translates to: RMPVPLPACHSA*LPTNPGRSLLV
Trigger: CACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGGAAGAGGGACAGGCATGCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 72 bp CACGTGAATCACACACCCCAGGTGCAGGGGCTGACATaGAGCACTGTGTCTGGGCGGAGAGCCTCGGCGTGC +
Preference number: 3 (lower is better)
Translates to: HVNHTPQVQGLT*STVSGRRASAC
Trigger: GCACGCCGAGGCTCTCCGCCCAGACACAGTGCTCCATGTCAGCCCCTGCACCTGGGGTGTGTGATTCACGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 72 bp CACTGTGGTCACGCCCCGCATGCCTGTCCCTCTTCCTaGTTGCCACTCAGCGTGGCTCCCGACAAATCCTGG +
Preference number: 3 (lower is better)
Translates to: HCGHAPHACPSS*LPLSVAPDKSW
Trigger: CCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGGAAGAGGGACAGGCATGCGGGGCGTGACCACAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 72 bp ATCCACCTGTCTCCTCCACTGTGGTCACGCCCCGCATaGCTGTCCCTCTTCCTGCTTGCCACTCAGCGTGGC +
Preference number: 3 (lower is better)
Translates to: IHLSPPLWSRPA*LSLFLLATQRG
Trigger: GCCACGCTGAGTGGCAAGCAGGAAGAGGGACAGGCATGCGGGGCGTGACCACAGTGGAGGAGACAGGTGGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CAA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGTGTCCCTCTTCCTGCTaGCCACTCAGCGTGGCTCCC +
Preference number: 3 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGCPSSC*PLSVAP
Trigger: GGGAGCCACGCTGAGTGGCAAGCAGGAAGAGGGACA...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR TCA 72 bp GCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTaGCTGGCTCAGAGCAATGAGTCCCTCTCTCTCCTG +
Preference number: 3 (lower is better)
Translates to: ASWCGPLSRGPR*LAQSNESLSLL
Trigger: CAGGAGAGAGAGGGACTCATTGCTCTGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000482699.1
ENST00000487661.1
3UTR GCA 72 bp ACTGTGTCTGGGCGGAGAGCCTCGGCGTGCCAGGTGTaGATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCC +
Preference number: 3 (lower is better)
Translates to: TVSGRRASACQV*IQASSAIRCFP
Trigger: GGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACACAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 72 bp ACATGGAGCACTGTGTCTGGGCGGAGAGCCTCGGCGTaGCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGG +
Preference number: 3 (lower is better)
Translates to: TWSTVSGRRASA*QVCIQASSAIR
Trigger: CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACACAGTGCTCCATGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CAA 90 bp TGTCTGGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTAGCTCATCCTCATCTGTaGTTTAGCACGCAGGCGCTG +
Preference number: 3 (lower is better)
Translates to: CLGGEPRRARCASRPLLLAHPHL*FSTQAL
Trigger: CAGCGCCTGCGTGCTAAACAACAGATGAGGATGAGC...TAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 72 bp AGCCTGTGGTTCCACATCCACCTGTCTCCTCCACTGTaGTCACGCCCCGCATGCCTGTCCCTCTTCCTGCTT +
Preference number: 3 (lower is better)
Translates to: SLWFHIHLSPPL*SRPACLSLFLL
Trigger: AAGCAGGAAGAGGGACAGGCATGCGGGGCGTGACCACAGTGGAGGAGACAGGTGGATGTGGAACCACAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 72 bp CAGTGGAAGTGTATGCCTGGGAATAGCCTCCCTACATaGCTCTTCCCACAGCTGCGGGTTCTGGGGGTGAGC +
Preference number: 3 (lower is better)
Translates to: QWKCMPGNSLPT*LFPQLRVLGVS
Trigger: GCTCACCCCCAGAACCCGCAGCTGTGGGAAGAGCCATGTAGGGAGGCTATTCCCAGGCATACACTTCCACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 72 bp GCTCTGGAGGTGCCTTCCCCACCCCCAAACGCCTCCTaGAAACTGTGGAGACTGTGTGACCTCAACCTTGTG +
Preference number: 3 (lower is better)
Translates to: ALEVPSPPPNAS*KLWRLCDLNLV
Trigger: CACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTGGGGAAGGCACCTCCAGAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 72 bp GACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTAGCTaGGGGAGTCAGGCAGACAAGGGTTTCAGTCCTGCT +
Preference number: 3 (lower is better)
Translates to: DSKAGGYSGQSS*GSQADKGFSPA
Trigger: AGCAGGACTGAAACCCTTGTCTGCCTGACTCCCCCAGCTACTCTGCCCACTGTAGCCCCCTGCCTTACTGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CAA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTAGGGACACAGGAGTTCTaGCTTAAAACCATCAGGGCC +
Preference number: 3 (lower is better)
Translates to: DGEGCARTVRQGATVGRVGTQEF*LKTIRA
Trigger: GGCCCTGATGGTTTTAAGCAAGAACTCCTGTGTCCC...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR TCA 72 bp CGGGTTATACTGTCCGGGGAAAATGCAAGAATGCCGTaGTCCTGGCAGTCCAGTGTAGGCCGGGTAGAGTCC +
Preference number: 3 (lower is better)
Translates to: RVILSGENARMP*SWQSSVGRVES
Trigger: GGACTCTACCCGGCCTACACTGGACTGCCAGGATCACGGCATTCTTGCATTTTCCCCGGACAGTATAACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482699.1
3UTR-3UTR CAA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTAAAAACACATTGCAGTaGTGTGCGGTGCCTCACACA +
Preference number: 3 (lower is better)
Translates to: RARCASRPLLLSGVSPRPKNTLQ*CAVPHT
Trigger: TGTGTGAGGCACCGCACACAACTGCAATGTGTTTTT...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR TCA 72 bp CAGGAGCTCAGAACTCTCCAGTTAGGTGCGAGGCCGTaGGCCACAAAGGGCCATTGGTTCTACAGAGAGAGA +
Preference number: 3 (lower is better)
Translates to: QELRTLQLGARP*ATKGHWFYRER
Trigger: TCTCTCTCTGTAGAACCAATGGCCCTTTGTGGCTCACGGCCTCGCACCTAACTGGAGAGTTCTGAGCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 72 bp CTGCCTATTCAGCCCATCCCTCTAACCACATCCAGCTaGAGGGGCTCAACAAGCTGCTTTCCTAGAGTGGTG +
Preference number: 3 (lower is better)
Translates to: LPIQPIPLTTSS*RGSTSCFPRVV
Trigger: CACCACTCTAGGAAAGCAGCTTGTTGAGCCCCTGCAGCTGGATGTGGTTAGAGGGATGGGCTGAATAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 72 bp TCAGCTGTGACGTCAGCTGAAGGCAGTGGAAGTGTATaGCTGGGAATAGCCTCCCTACATGGCTCTTCCCAC +
Preference number: 3 (lower is better)
Translates to: SAVTSAEGSGSV*LGIASLHGSSH
Trigger: GTGGGAAGAGCCATGTAGGGAGGCTATTCCCAGGCATACACTTCCACTGCCTTCAGCTGACGTCACAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 72 bp CAGCTGGCCTCTCCCTTCCTCACTGGGTCACAGACATaGTTTACTCATGTCCCCTTAGAGCCTCATGCTCTG +
Preference number: 3 (lower is better)
Translates to: QLASPFLTGSQT*FTHVPLEPHAL
Trigger: CAGAGCATGAGGCTCTAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGTGAGGAAGGGAGAGGCCAGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 72 bp TCCATGCCCACCTCTCAAGGATACTGTGAGGAGCCTTaGCCAGAGCCTGGTCATGGTAGGAGCATGTCAGTT +
Preference number: 3 (lower is better)
Translates to: SMPTSQGYCEEP*PEPGHGRSMSV
Trigger: AACTGACATGCTCCTACCATGACCAGGCTCTGGGCAAGGCTCCTCACAGTATCCTTGAGAGGTGGGCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 72 bp GCCCCTTCCTCTCACCTTCCCCCATCTGTGGGATATTaGTGCAGGATTGTGGCATCTGTGCACGTGAATCAC +
Preference number: 3 (lower is better)
Translates to: APSSHLPPSVGY*CRIVASVHVNH
Trigger: GTGATTCACGTGCACAGATGCCACAATCCTGCACCAATATCCCACAGATGGGGGAAGGTGAGAGGAAGGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 72 bp CATCACTTGCCCCTTCCTCTCACCTTCCCCCATCTGTaGGATATTGGTGCAGGATTGTGGCATCTGTGCACG +
Preference number: 3 (lower is better)
Translates to: HHLPLPLTFPHL*DIGAGLWHLCT
Trigger: CGTGCACAGATGCCACAATCCTGCACCAATATCCCACAGATGGGGGAAGGTGAGAGGAAGGGGCAAGTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CAA 90 bp AGCCTTGCCCAGAGCCTGGTCATGGTAGGAGCATGTCAGTTCATCCGCCTAAAGGCAGTTACACATCACTaGCCCCTTCCTCTCACCTTC +
Preference number: 3 (lower is better)
Translates to: SLAQSLVMVGACQFIRLKAVTHH*PLPLTF
Trigger: GAAGGTGAGAGGAAGGGGCAAGTGATGTGTAACTGC...CTTTAGGCGGATGAACTGACATGCTCCTACCATGACCAGGCTCTGGGCAAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR TCA 72 bp CATGAGATTCTGGGTACAAAGTGCTGCAGTAGCCGGTaGGCAAACTCATGTGTGGCTCCATCTCGGCTCCCT +
Preference number: 3 (lower is better)
Translates to: HEILGTKCCSSR*ANSCVAPSRLP
Trigger: AGGGAGCCGAGATGGAGCCACACATGAGTTTGCTCACCGGCTACTGCAGCACTTTGTACCCAGAATCTCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 72 bp CAAAGTGCTGCAGTAGCCGGTGAGCAAACTCATGTGTaGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAAT +
Preference number: 3 (lower is better)
Translates to: QSAAVAGEQTHV*LHLGSLFFLRN
Trigger: ATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACACATGAGTTTGCTCACCGGCTACTGCAGCACTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 72 bp CACAGTTTCATGCAGGCACCAAAAAGCCACACGTGGTaGGTGACCCAAAGGTGCCTGCTCTGGGAACTTTCA +
Preference number: 3 (lower is better)
Translates to: HSFMQAPKSHTW*VTQRCLLWELS
Trigger: TGAAAGTTCCCAGAGCAGGCACCTTTGGGTCACCCACCACGTGTGGCTTTTTGGTGCCTGCATGAAACTGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR CCA 72 bp CAACACAGTTTCATGCAGGCACCAAAAAGCCACACGTaGTGGGTGACCCAAAGGTGCCTGCTCTGGGAACTT +
Preference number: 3 (lower is better)
Translates to: QHSFMQAPKSHT*WVTQRCLLWEL
Trigger: AAGTTCCCAGAGCAGGCACCTTTGGGTCACCCACCACGTGTGGCTTTTTGGTGCCTGCATGAAACTGTGTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR GCA 72 bp CCTTCCTCTCACCTTCCCCCATCTGTGGGATATTGGTaGAGGATTGTGGCATCTGTGCACGTGAATCACACA +
Preference number: 3 (lower is better)
Translates to: PSSHLPPSVGYW*RIVASVHVNHT
Trigger: TGTGTGATTCACGTGCACAGATGCCACAATCCTGCACCAATATCCCACAGATGGGGGAAGGTGAGAGGAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 72 bp GGCCTTACCACGGGAACAAGGCAAGCAGCTCTCAGATaGATGTGTATGTCTGACTGCACTTGTCAGAAACCC +
Preference number: 3 (lower is better)
Translates to: GLTTGTRQAALR*MCMSDCTCQKP
Trigger: GGGTTTCTGACAAGTGCAGTCAGACATACACATCCATCTGAGAGCTGCTTGCCTTGTTCCCGTGGTAAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR CCA 72 bp AGCCACACGTGGTGGGTGACCCAAAGGTGCCTGCTCTaGGAACTTTCACATCTGAATAGGTGTCATCCTTCA +
Preference number: 3 (lower is better)
Translates to: SHTWWVTQRCLL*ELSHLNRCHPS
Trigger: TGAAGGATGACACCTATTCAGATGTGAAAGTTCCCAGAGCAGGCACCTTTGGGTCACCCACCACGTGTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR-3UTR CAA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGAAAAAACACATTGCAGTaGTGTGCGGTGCCTCACACA +
Preference number: 3 (lower is better)
Translates to: PKETDSRALGWLKGQRKRKNTLQ*CAVPHT
Trigger: TGTGTGAGGCACCGCACACAACTGCAATGTGTTTTT...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CAA 90 bp CATCACTTGCCCCTTCCTCTCACCTTCCCCCATCTGTGGGATATTGGTGCAGGAAAACCTGCGTTCAGTTaGACATTTCTCCTCCATACG +
Preference number: 3 (lower is better)
Translates to: HHLPLPLTFPHLWDIGAGKPAFS*TFLLHT
Trigger: CGTATGGAGGAGAAATGTCAAACTGAACGCAGGTTT...TCCTGCACCAATATCCCACAGATGGGGGAAGGTGAGAGGAAGGGGCAAGTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CAA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCAGCCACAAAGGGCCATaGGTTCTACAGAGAGAGAGG +
Preference number: 3 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFISHKGP*VLQRER
Trigger: CCTCTCTCTCTGTAGAACCAATGGCCCTTTGTGGCT...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CAA 90 bp CATCACTTGCCCCTTCCTCTCACCTTCCCCCATCTGTGGGATATTGGTGCAGGAACCGTTTTCTCGATGTaGGGATTCTTCCCAAGAATG +
Preference number: 3 (lower is better)
Translates to: HHLPLPLTFPHLWDIGAGTVFSM*GFFPRM
Trigger: CATTCTTGGGAAGAATCCCAACATCGAGAAAACGGT...TCCTGCACCAATATCCCACAGATGGGGGAAGGTGAGAGGAAGGGGCAAGTGATG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR GCA 72 bp GCCTTCCACTTCCTATACCAAAGCCACGTGCCAGTGTaGTTCTTGCTGAGCACAAGCCAGCCACTATTTTCT +
Preference number: 3 (lower is better)
Translates to: AFHFLYQSHVPV*FLLSTSQPLFS
Trigger: AGAAAATAGTGGCTGGCTTGTGCTCAGCAAGAAGCACACTGGCACGTGGCTTTGGTATAGGAAGTGGAAGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR GCA 72 bp AGGCAAGCAGCTCTCAGATGGATGTGTATGTCTGACTaGACTTGTCAGAAACCCAGGTCCTTGCCTTCCACT +
Preference number: 3 (lower is better)
Translates to: RQAALRWMCMSD*TCQKPRSLPST
Trigger: AGTGGAAGGCAAGGACCTGGGTTTCTGACAAGTGCAGTCAGACATACACATCCATCTGAGAGCTGCTTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR CCA 72 bp TGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTaGCTTGGAAACTGTAGCATAAGACAACCTAGAAAC +
Preference number: 3 (lower is better)
Translates to: CAVPHTFPHCGG*LGNCSIRQPRN
Trigger: GTTTCTAGGTTGTCTTATGCTACAGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CAA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACAACAGCTTTGAGTGGTaGAAAGTTTACATGGGGTTT +
Preference number: 3 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHNSFEW*KVYMGF
Trigger: AAACCCCATGTAAACTTTCAACCACTCAAAGCTGTT...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR TCA 72 bp CCAGTGCCATGGTGCAGTCACTCAGAGAGACTCTCTTaGTACTGGCCCACATTCACGTTCACAGTAACAACA +
Preference number: 3 (lower is better)
Translates to: PVPWCSHSERLS*YWPTFTFTVTT
Trigger: TGTTGTTACTGTGAACGTGAATGTGGGCCAGTATCAAGAGAGTCTCTCTGAGTGACTGCACCATGGCACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 72 bp CACTGTCCGTTCAATGGCGACATCTTCAGACTTCAGTaGTACGCTCATCCTCATCTGTTGTTTAGCACGCAG +
Preference number: 3 (lower is better)
Translates to: HCPFNGDIFRLQ*YAHPHLLFSTQ
Trigger: CTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGATGTCGCCATTGAACGGACAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 72 bp AGTTCACAAAAATATGCTTCCAGTATGTGGGAGCCATaGCCTTACCACGGGAACAAGGCAAGCAGCTCTCAG +
Preference number: 3 (lower is better)
Translates to: SSQKYASSMWEP*PYHGNKASSSQ
Trigger: CTGAGAGCTGCTTGCCTTGTTCCCGTGGTAAGGCCATGGCTCCCACATACTGGAAGCATATTTTTGTGAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR-3UTR CAA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAATGTCCCTCTTCCTGCTaGCCACTCAGCGTGGCTCCC +
Preference number: 3 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKCPSSC*PLSVAP
Trigger: GGGAGCCACGCTGAGTGGCAAGCAGGAAGAGGGACA...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR-3UTR CAA 90 bp AGCCTTGCCCAGAGCCTGGTCATGGTAGGAGCATGTCAGTTCATCCGCCTAAAGAACAGCTTTGAGTGGTaGAAAGTTTACATGGGGTTT +
Preference number: 3 (lower is better)
Translates to: SLAQSLVMVGACQFIRLKNSFEW*KVYMGF
Trigger: AAACCCCATGTAAACTTTCAACCACTCAAAGCTGTT...CTTTAGGCGGATGAACTGACATGCTCCTACCATGACCAGGCTCTGGGCAAGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR TCA 72 bp TCCTATACCAAAGCCACGTGCCAGTGTGCTTCTTGCTaGGCACAAGCCAGCCACTATTTTCTTAATGACAAG +
Preference number: 3 (lower is better)
Translates to: SYTKATCQCASC*AQASHYFLNDK
Trigger: CTTGTCATTAAGAAAATAGTGGCTGGCTTGTGCTCAGCAAGAAGCACACTGGCACGTGGCTTTGGTATAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR CCA 72 bp TCTGAAAACAGTTCACAAAAATATGCTTCCAGTATGTaGGAGCCATGGCCTTACCACGGGAACAAGGCAAGC +
Preference number: 3 (lower is better)
Translates to: SENSSQKYASSM*EPWPYHGNKAS
Trigger: GCTTGCCTTGTTCCCGTGGTAAGGCCATGGCTCCCACATACTGGAAGCATATTTTTGTGAACTGTTTTCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR CCA 72 bp CCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTaGAACAGTCTCAAAACAGATCCAAAAGGAAACCTC +
Preference number: 3 (lower is better)
Translates to: PMEVSRERKPSF*NSLKTDPKGNL
Trigger: GAGGTTTCCTTTTGGATCTGTTTTGAGACTGTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CCA 72 bp AGTGTAGGCCGGGTAGAGTCCGTTTCGTTCAAGTTCTaGATTCCTTACACTTGTAGGCTTTATAAGGTCCTA +
Preference number: 3 (lower is better)
Translates to: SVGRVESVSFKF*IPYTCRLYKVL
Trigger: TAGGACCTTATAAAGCCTACAAGTGTAAGGAATCCAGAACTTGAACGAAACGGACTCTACCCGGCCTACACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482699.1
3UTR TCA 72 bp GATTATGTAAGAATAGGGATTATATTTAGAGGACCTTaGAGAAACAACCATGCCCGGGGCAGAACTGTCCCC +
Preference number: 3 (lower is better)
Translates to: DYVRIGIIFRGP*RNNHARGRTVP
Trigger: GGGGACAGTTCTGCCCCGGGCATGGTTGTTTCTTCAAGGTCCTCTAAATATAATCCCTATTCTTACATAATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR TCA 72 bp ACCTCTTTAAGAACTCAATCGTCACATCTTAGTTTTTaGCCTCAGATGCCATCAGCCAACTTGACTGAACCA +
Preference number: 3 (lower is better)
Translates to: TSLRTQSSHLSF*PQMPSANLTEP
Trigger: TGGTTCAGTCAAGTTGGCTGATGGCATCTGAGGTCAAAAACTAAGATGTGACGATTGAGTTCTTAAAGAGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR TCA 72 bp ATCTTAGTTTTTGACCTCAGATGCCATCAGCCAACTTaGCTGAACCACCTATCAGCAATTTTGGCTCTAAAT +
Preference number: 3 (lower is better)
Translates to: ILVFDLRCHQPT*LNHLSAILALN
Trigger: ATTTAGAGCCAAAATTGCTGATAGGTGGTTCAGTCAAGTTGGCTGATGGCATCTGAGGTCAAAAACTAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR TCA 72 bp AGGAAAATAATTAACAAGCCAGTATTTTGCTGCAAATaGATCACCAAATTGCTGCCTATGGAAGTGTCTCGG +
Preference number: 3 (lower is better)
Translates to: RKIINKPVFCCK*ITKLLPMEVSR
Trigger: CCGAGACACTTCCATAGGCAGCAATTTGGTGATTCATTTGCAGCAAAATACTGGCTTGTTAATTATTTTCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR TCA 72 bp TCTCTATTTCCAAAAACACACATGAGAACCTCAGAATaGCACTTTGTTAAGGGAGGAAATGAAATGTCCCTT +
Preference number: 3 (lower is better)
Translates to: SLFPKTHMRTSE*HFVKGGNEMSL
Trigger: AAGGGACATTTCATTTCCTCCCTTAACAAAGTGTCATTCTGAGGTTCTCATGTGTGTTTTTGGAAATAGAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR CCA 72 bp AAAAGTTATTTCTTCAGCCGAATAAACAGCTTTGAGTaGTTGAAAGTTTACATGGGGTTTGTGGACATGAGA +
Preference number: 3 (lower is better)
Translates to: KSYFFSRINSFE*LKVYMGFVDMR
Trigger: TCTCATGTCCACAAACCCCATGTAAACTTTCAACCACTCAAAGCTGTTTATTCGGCTGAAGAAATAACTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR TCA 72 bp TTCATAGGGTTTTCTGTGAGCAGTTTACACCAGATATaGTGGAGTATAACGCTAATGAAGATACTTTACTAC +
Preference number: 3 (lower is better)
Translates to: FIGFSVSSLHQI*WSITLMKILYY
Trigger: GTAGTAAAGTATCTTCATTAGCGTTATACTCCATCATATCTGGTGTAAACTGCTCACAGAAAACCCTATGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGGCGCAGCCTCCTGGTaGGGTCCTCTGAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSGAASW*GPLSRG
Trigger: ACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCC...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000482699.1
ENST00000487661.1
CDS-3UTR CCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCACTGTCTCCTCCACTGTaGTCACGCCCCGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSLSPPL*SRPACL
Trigger: CAGGCATGCGGGGCGTGACCACAGTGGAGGAGACAG...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CCTGCTTGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCTGGTGGTCCCTCTTCCTGCTTaGCACTCAGCGTGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: PACHSAWLPTNPGRSLLVVPLPA*HSAWLP
Trigger: CGGGAGCCACGCTGAGTGGCAAGCAGGAAGAGGGAC...CACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGCCTGTCCCTCTTCCTaGTTGCCACTCAGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSACPSS*LPLSVA
Trigger: AGCCACGCTGAGTGGCAAGCAGGAAGAGGGACAGGC...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCTCGCCCTGGTGCCAGTaGCATGGTGCAGTCACTCAG +
Preference number: 4 (lower is better)
Translates to: SPRPRRDPSAARNPVQECSPWCQ*HGAVTQ
Trigger: CTGAGTGACTGCACCATGGCACTGGCACCAGGGCGA...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCGGGGGTGAGCAGGCATaGTGCGGAAGGAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: SPRPRRDPSAARNPVQECGGEQA*CGRSQE
Trigger: TTCTTGGCTCCTTCCGCAGCATGCCTGCTCACCCCC...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCACCCCTTAGAGCCTCATaGTCTGGAGGTGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSPLRAS*SGGAFP
Trigger: GGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGG...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CAGCCTGTGGTTCCACATCCACCTGTCTCCTCCACTGTGGTCACGCCCCGCATGGACGGGACACACAGATaGCCCTGCGCCCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QPVVPHPPVSSTVVTPRMDGTHR*PCARLL
Trigger: GAGGAGCCGGGCGCAGGGGCATCTGTGTGTCCCGTC...CATGCGGGGCGTGACCACAGTGGAGGAGACAGGTGGATGTGGAACCACAGGCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
3UTR CAA 72 bp TGTGGTCACGCCCCGCATGCCTGTCCCTCTTCCTGCTaGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCG +
Preference number: 4 (lower is better)
Translates to: CGHAPHACPSSC*PLSVAPDKSWA
Trigger: CGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGGAAGAGGGACAGGCATGCGGGGCGTGACCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCATCACAGGTCCCAGACTaGCCGTCAAAGATCGCAGCG +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSSQVPD*PSKIAA
Trigger: CGCTGCGATCTTTGACGGTCAGTCTGGGACCTGTGA...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp CAGCCTGTGGTTCCACATCCACCTGTCTCCTCCACTGTGGTCACGCCCCGCATGCCTGGTGCGGTCCTCTaGGCAGAGGTCCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: QPVVPHPPVSSTVVTPRMPGAVL*AEVPGD
Trigger: GTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGG...CATGCGGGGCGTGACCACAGTGGAGGAGACAGGTGGATGTGGAACCACAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGCTGCAATCATCCCCTTaGCAGGAAGGCGGGCACCTG +
Preference number: 4 (lower is better)
Translates to: GRRASACQVCIQASSAIRLQSSP*QEGGHL
Trigger: CAGGTGCCCGCCTTCCTGGCAAGGGGATGATTGCAG...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp CAGCCTGTGGTTCCACATCCACCTGTCTCCTCCACTGTGGTCACGCCCCGCATGGGCGCAGCCTCCTGGTaGGGTCCTCTGAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: QPVVPHPPVSSTVVTPRMGAASW*GPLSRG
Trigger: ACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCC...CATGCGGGGCGTGACCACAGTGGAGGAGACAGGTGGATGTGGAACCACAGGCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CCTGCTTGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCTGGTGTGGTCACGCCCCGCATaGCTGTCCCTCTTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: PACHSAWLPTNPGRSLLVWSRPA*LSLFLL
Trigger: AAGCAGGAAGAGGGACAGGCATGCGGGGCGTGACCA...CACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCATCCTCCATACGCAGCTaGCTCTGGCCTCCACAATGG +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSSSIRS*LWPPQW
Trigger: CCATTGTGGAGGCCAGAGGCAGCTGCGTATGGAGGA...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCATCCAGGGCCTTAGGCTaGCTCAAGGGGCAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSSRALG*LKGQRK
Trigger: TTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGA...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCTGGCCTCCACAATGGTaGTCGAGTCCCAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGWPPQW*SSPRPQ
Trigger: CTGGGGCCTGGGACTCGATCACCATTGTGGAGGCCA...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CAGCCTGTGGTTCCACATCCACCTGTCTCCTCCACTGTGGTCACGCCCCGCATGCAGCTAGGAACCCCGTaGAGGAGTGCAGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: QPVVPHPPVSSTVVTPRMQLGTP*RSAAGL
Trigger: GAGGCCAGCTGCACTCCTGCACGGGGTTCCTAGCTG...CATGCGGGGCGTGACCACAGTGGAGGAGACAGGTGGATGTGGAACCACAGGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CCTGCTTGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCTGGTGGAGGTCCCAGGTGACTaGCTCAGAGCAATGAGTCCC +
Preference number: 4 (lower is better)
Translates to: PACHSAWLPTNPGRSLLVEVPGD*LRAMSP
Trigger: GGGACTCATTGCTCTGAGCCAGTCACCTGGGACCTC...CACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGCTGGGCGCAGCCTCCTaGTGCGGTCCTCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGLGAAS*CGPLSR
Trigger: TCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCCAG...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTAGCTCCCGACAAATCCTaGGCGCAGCCTCCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: DGEGCARTVRQGATVGRVAPDKS*AQPPGA
Trigger: CGCACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGC...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCCAGGGTGATGGTGAGTaGTGGAGACCATGGGACACA +
Preference number: 4 (lower is better)
Translates to: SPRPRRDPSAARNPVQECQGDGE*WRPWDT
Trigger: TGTGTCCCATGGTCTCCACCACTCACCATCACCCTG...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCACAGGGTGATGGTGAGTaGTGGAGACCATGGGACACA +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSQGDGE*WRPWDT
Trigger: TGTGTCCCATGGTCTCCACCACTCACCATCACCCTG...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCACCCCCAAACGCCTCCTaGAAACTGTGGAGACTGTGT +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSPPNAS*KLWRLC
Trigger: ACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGG...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGTGGCCTCCACAATGGTaGTCGAGTCCCAGGCCCCAG +
Preference number: 4 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGWPPQW*SSPRPQ
Trigger: CTGGGGCCTGGGACTCGATCACCATTGTGGAGGCCA...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGCTTAAACCAAACCACTaGTGCCAGGGAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GRRASACQVCIQASSAIRLKPNH*CQGASQ
Trigger: CTGGCTGGCTCCCTGGCATCAGTGGTTTGGTTTAAG...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CAGCCTGTGGTTCCACATCCACCTGTCTCCTCCACTGTGGTCACGCCCCGCATGCCCACCTCCCGCGGCTaGGATCACCACAGTGATAAG +
Preference number: 4 (lower is better)
Translates to: QPVVPHPPVSSTVVTPRMPTSRG*DHHSDK
Trigger: CTTATCACTGTGGTGATCGCAGCCGCGGGAGGTGGG...CATGCGGGGCGTGACCACAGTGGAGGAGACAGGTGGATGTGGAACCACAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CCTGCTTGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCTGGTGGTGCCAGTGCCATGGTaGAGTCACTCAGAGAGACTC +
Preference number: 4 (lower is better)
Translates to: PACHSAWLPTNPGRSLLVVPVPW*SHSERL
Trigger: GAGTCTCTCTGAGTGACTGCACCATGGCACTGGCAC...CACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGCTAACCACATCCAGCTaGAGGGGCTCAACAAGCTGC +
Preference number: 4 (lower is better)
Translates to: GRRASACQVCIQASSAIRLTTSS*RGSTSC
Trigger: GCAGCTTGTTGAGCCCCTGCAGCTGGATGTGGTTAG...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCCCCTTAGAGCCTCATaGTCTGGAGGTGCCTTCCCC +
Preference number: 4 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGPLRAS*SGGAFP
Trigger: GGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGG...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCACGGAGAGCCTCGGCGTaGCAGGTGTGCATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPRRASA*QVCIQA
Trigger: GGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCG...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCACACACAGATGCCCCTaGGCCCGGCTCCTCTCTATG +
Preference number: 4 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGTHRCP*ARLLSM
Trigger: CATAGAGAGGAGCCGGGCGCAGGGGCATCTGTGTGT...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACGACGGGACACACAGATaGCCCTGCGCCCGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHDGTHR*PCARLL
Trigger: GAGGAGCCGGGCGCAGGGGCATCTGTGTGTCCCGTC...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCACTGTGTCGCGGCGCCTaGCTCAGGGGCCCTGTAGCT +
Preference number: 4 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPLCRGA*LRGPVA
Trigger: AGCTACAGGGCCCCTGAGCCAGGCGCCGCGACACAG...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCACTGACTGAGGAGCTCTaGAGGCCAGTGGAGTTGTTA +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSLTEEL*RPVELL
Trigger: TAACAACTCCACTGGCCTCCAGAGCTCCTCAGTCAG...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCGTTGGTGCTTGTGGCTaGAAGGGTTTGCTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: SPRPRRDPSAARNPVQECVGACG*KGLLCG
Trigger: TCCACAGAGCAAACCCTTCCAGCCACAAGCACCAAC...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCCTGGGCGCAGCCTCCTaGTGCGGTCCTCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPLGAAS*CGPLSR
Trigger: TCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCCAG...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GTCCGGGGAAAATGCAAGAATGCCGTGATCCTGGCAGTCCAGTGTAGGCCGGGTCTGGGCGCAGCCTCCTaGTGCGGTCCTCTGAGCAGA +
Preference number: 4 (lower is better)
Translates to: VRGKCKNAVILAVQCRPGLGAAS*CGPLSR
Trigger: TCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCCAG...ACCCGGCCTACACTGGACTGCCAGGATCACGGCATTCTTGCATTTTCCCCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482699.1
CDS-3UTR CCA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCGAGTGGTGGAGACCATaGGACACAGGAGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: SPRPRRDPSAARNPVQECEWWRP*DTGVLA
Trigger: AGCAAGAACTCCTGTGTCCCATGGTCTCCACCACTC...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CAGCCTGTGGTTCCACATCCACCTGTCTCCTCCACTGTGGTCACGCCCCGCATGGTGCAGGAGTGCAGCTaGCCTCTCCCTTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: QPVVPHPPVSSTVVTPRMVQECS*PLPSSL
Trigger: CAGTGAGGAAGGGAGAGGCCAGCTGCACTCCTGCAC...CATGCGGGGCGTGACCACAGTGGAGGAGACAGGTGGATGTGGAACCACAGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTAATGGAGCACTGTGTCTaGGCGGAGAGCCTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: DGEGCARTVRQGATVGRVMEHCV*AESLGV
Trigger: CACGCCGAGGCTCTCCGCCCAGACACAGTGCTCCAT...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCTTAGCCAAGGGCAACTaGAGTGGACAGCTCCTCTTC +
Preference number: 4 (lower is better)
Translates to: SPRPRRDPSAARNPVQECLAKGN*SGQLLF
Trigger: GAAGAGGAGCTGTCCACTCCAGTTGCCCTTGGCTAA...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCACACACCTTCAGGATATaGAGCAGAGCTTCCTGTCAC +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSHTFRI*SRASCH
Trigger: GTGACAGGAAGCTCTGCTTCATATCCTGAAGGTGTG...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCAGAGATGCTGTGCTTaGCAGGGTGCCAGGAGTGGT +
Preference number: 4 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGQRCCA*QGARSG
Trigger: ACCACTCCTGGCACCCTGTCAAGCACAGCATCTCTG...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCGGTTCCTTTCTGTGCTaGTGCCACCTTCTGTTGAGA +
Preference number: 4 (lower is better)
Translates to: SPRPRRDPSAARNPVQECGSFLC*CHLLLR
Trigger: TCTCAACAGAAGGTGGCATCAGCACAGAAAGGAACC...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp CCTGCTTGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCTGGTGTCACAGCACAGCTGTTaGCTGAGGCTGAAGAGGACA +
Preference number: 4 (lower is better)
Translates to: PACHSAWLPTNPGRSLLVSQHSC*LRLKRT
Trigger: TGTCCTCTTCAGCCTCAGTCAACAGCTGTGCTGTGA...CACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACGTGCGATGCCTAGGATaGGCAGGAGCCCACCTCCCG +
Preference number: 4 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHVRCLG*AGAHLP
Trigger: CGGGAGGTGGGCTCCTGCTCATCCTAGGCATCGCAC...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGGTGCGATGCCTAGGATaGGCAGGAGCCCACCTCCCG +
Preference number: 4 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWVRCLG*AGAHLP
Trigger: CGGGAGGTGGGCTCCTGCTCATCCTAGGCATCGCAC...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CCTGCTTGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCTGGTGAGCTGTGACGTCAGCTaGAGGCAGTGGAAGTGTATG +
Preference number: 4 (lower is better)
Translates to: PACHSAWLPTNPGRSLLVSCDVS*RQWKCM
Trigger: CATACACTTCCACTGCCTTCAGCTGACGTCACAGCT...CACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CCTGCTTGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCTGGTGCTCATGGATGAAAAGTaGCCCCCTGCCTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: PACHSAWLPTNPGRSLLVLMDEK*PPACNL
Trigger: CAGATTGCAGGCAGGGGGGCACTTTTCATCCATGAG...CACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCACTGTCCCCAGTGGCTaGACCATTTCCAGAAATGTG +
Preference number: 4 (lower is better)
Translates to: SPRPRRDPSAARNPVQECTVPSG*TISRNV
Trigger: CACATTTCTGGAAATGGTGCAGCCACTGGGGACAGT...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTAGGGGGTGAGCAGGCATaGTGCGGAAGGAGCCAAGAA +
Preference number: 4 (lower is better)
Translates to: DGEGCARTVRQGATVGRVGGEQA*CGRSQE
Trigger: TTCTTGGCTCCTTCCGCAGCATGCCTGCTCACCCCC...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGGGCAGTGGAAGTGTATaGCTGGGAATAGCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: GRRASACQVCIQASSAIRGSGSV*LGIASL
Trigger: TAGGGAGGCTATTCCCAGGCATACACTTCCACTGCC...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGTCGGCGTGCCAGGTGTaGATCCAGGCCTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGSACQV*IQASSA
Trigger: AGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGA...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCACAGTTACACATCACTTaGCCCTTCCTCTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSQLHIT*PFLSPS
Trigger: GGAAGGTGAGAGGAAGGGGCAAGTGATGTGTAACTG...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp AGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGAGCAAGGAGTCCAAAGATGCTaGCTTCTCCCTTGGGCCCAC +
Preference number: 4 (lower is better)
Translates to: SLLVRSSEQRSQVTGSEQGVQRC*LLPWAH
Trigger: GTGGGCCCAAGGGAGAAGGCAGCATCTTTGGACTCC...TTGCTCTGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGGCACATGGCTGTGGATaGGCAGGGGTTCGACAGGCA +
Preference number: 4 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGAHGCG*AGVRQA
Trigger: TGCCTGTCGAACCCCTGCCCATCCACAGCCATGTGC...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGCCTCACTGTGGGGGCTaGCTTGGAAACTGTAGCATA +
Preference number: 4 (lower is better)
Translates to: GRRASACQVCIQASSAIRPHCGG*LGNCSI
Trigger: TATGCTACAGTTTCCAAGCCAGCCCCCACAGTGAGG...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CCTGCTTGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCTGGTGGCCTCCTGGAAACTGTaGAGACTGTGTGACCTCAAC +
Preference number: 4 (lower is better)
Translates to: PACHSAWLPTNPGRSLLVASWKL*RLCDLN
Trigger: GTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGC...CACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CCTGCTTGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCTGGTGAGTATGTGGGAGCCATaGCCTTACCACGGGAACAAG +
Preference number: 4 (lower is better)
Translates to: PACHSAWLPTNPGRSLLVSMWEP*PYHGNK
Trigger: CTTGTTCCCGTGGTAAGGCCATGGCTCCCACATACT...CACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTACACAGTCCATTCTTCTaGCAGCCCCATCGCCCTCTC +
Preference number: 4 (lower is better)
Translates to: DGEGCARTVRQGATVGRVHSPFF*QPHRPL
Trigger: GAGAGGGCGATGGGGCTGTCAGAAGAATGGACTGTG...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTTGTCTTTGTTTGACTaGCTGAGGAGCTCTGGAGGC +
Preference number: 4 (lower is better)
Translates to: GRRASACQVCIQASSAIRLSLFD*LRSSGG
Trigger: GCCTCCAGAGCTCCTCAGTCAGTCAAACAAAGACAA...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTAACCAGGTCCCTGCACTaGAGTCTAGTGGTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: DGEGCARTVRQGATVGRVTRSLH*SLVVCP
Trigger: AGGGCAGACCACTAGACTTCAGTGCAGGGACCTGGT...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTACCAGGTCCCTGCACTaGAGTCTAGTGGTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: RARCASRPLLLSGVSPRPTRSLH*SLVVCP
Trigger: AGGGCAGACCACTAGACTTCAGTGCAGGGACCTGGT...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp AGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGAGCAATGCTGCAGTAGCCGGTaGGCAAACTCATGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: SLLVRSSEQRSQVTGSEQCCSSR*ANSCVA
Trigger: AGCCACACATGAGTTTGCTCACCGGCTACTGCAGCA...TTGCTCTGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCTTAGGTGCGAGGCCGTaGGCCACAAAGGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPLGARP*ATKGHW
Trigger: CCAATGGCCCTTTGTGGCTCACGGCCTCGCACCTAA...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCAGCCACACGTGGTGGGTaGCCCAAAGGTGCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPATRGG*PKGACS
Trigger: AGAGCAGGCACCTTTGGGTCACCCACCACGTGTGGC...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGATCCCTGAGTATTGTTaGACATGGCTGTGGATGGGC +
Preference number: 4 (lower is better)
Translates to: GRRASACQVCIQASSAIRIPEYC*TWLWMG
Trigger: GCCCATCCACAGCCATGTGCAACAATACTCAGGGAT...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp CCTGCTTGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCTGGTGGGGAAAATGCAAGAATaGCGTGATCCTGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: PACHSAWLPTNPGRSLLVGKMQE*RDPGSP
Trigger: TGGACTGCCAGGATCACGGCATTCTTGCATTTTCCC...CACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAAGGGGCTCAACAAGCTaGTTTCCTAGAGTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSRGSTS*FPRVVK
Trigger: TTTCACCACTCTAGGAAAGCAGCTTGTTGAGCCCCT...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp TGTCTGGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTAAACTCTCCAGTTAGGTaGGAGGCCGTGAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: CLGGEPRRARCASRPLLLNSPVR*EAVSHK
Trigger: TTTGTGGCTCACGGCCTCGCACCTAACTGGAGAGTT...TAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CCTGCTTGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCTGGTGAAGTCGTGGCAATTCTaGAGTCCTTGGGGAAGCCTT +
Preference number: 4 (lower is better)
Translates to: PACHSAWLPTNPGRSLLVKSWQF*SPWGSL
Trigger: AAGGCTTCCCCAAGGACTCCAGAATTGCCACGACTT...CACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGACCACCAAGGCCAAATaGGCAACTCATGCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: GRRASACQVCIQASSAIRTTKAK*ATHAGF
Trigger: GAAACCTGCATGAGTTGCCCATTTGGCCTTGGTGGT...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCGCTTGCCACTCAGCGTaGCTCCCGACAAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPACHSA*LPTNPG
Trigger: CCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGC...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGCTGTCTCCTCCACTGTaGTCACGCCCCGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWLSPPL*SRPACL
Trigger: CAGGCATGCGGGGCGTGACCACAGTGGAGGAGACAG...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp AGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGAGCAATCTAGTGGTCTGCCCTaGCTAATAGTCGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: SLLVRSSEQRSQVTGSEQSSGLP*LIVALV
Trigger: CACCAGGGCGACTATTAGCCAGGGCAGACCACTAGA...TTGCTCTGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp TGTCTGGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTAGCCTCCTGGAAACTGTaGAGACTGTGTGACCTCAAC +
Preference number: 4 (lower is better)
Translates to: CLGGEPRRARCASRPLLLASWKL*RLCDLN
Trigger: GTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGC...TAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCAGTGCAGGGGCTGACATaGAGCACTGTGTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPVQGLT*STVSGR
Trigger: CCGCCCAGACACAGTGCTCCATGTCAGCCCCTGCAC...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CCTGCTTGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCTGGTGGAAGTTTGTTCTACTTaGAGAGCCGCTCCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: PACHSAWLPTNPGRSLLVEVCST*RAAPSS
Trigger: AGAGGAAGGAGCGGCTCTTCAAGTAGAACAAACTTC...CACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCTTCCCCGTCATAGGATaGGATGTTACTTCTCTCAGT +
Preference number: 4 (lower is better)
Translates to: SPRPRRDPSAARNPVQECFPVIG*DVTSLS
Trigger: ACTGAGAGAAGTAACATCTCATCCTATGACGGGGAA...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAAGGACTTGCAGGAGTTaGCACATTTCTGCATCCTAT +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSRTCRS*HISASY
Trigger: ATAGGATGCAGAAATGTGTCAACTCCTGCAAGTCCT...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGTGCTGCAGTAGCCGGTaGGCAAACTCATGTGTGGCT +
Preference number: 4 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGCCSSR*ANSCVA
Trigger: AGCCACACATGAGTTTGCTCACCGGCTACTGCAGCA...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTCCCTGCTGCAGTGTGTaGCGGGACACACAGATGCCC +
Preference number: 4 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETPCCSV*RDTQMP
Trigger: GGGCATCTGTGTGTCCCGTCACACACTGCAGCAGGG...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCGTGGCCTCTTGGCTGTaGACAGTCCATTCTTCTGAC +
Preference number: 4 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGVASWL*TVHSSD
Trigger: GTCAGAAGAATGGACTGTGCACAGCCAAGAGGCCAC...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCTTTGTGCTAAGTTGGTaGTTGTGGCTGGAAGGGTTT +
Preference number: 4 (lower is better)
Translates to: SPRPRRDPSAARNPVQECFVLSW*LWLEGF
Trigger: AAACCCTTCCAGCCACAAGCACCAACTTAGCACAAA...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGAGGCGCAGCCTCCTGGTaGGGTCCTCTGAGCAGAGGT +
Preference number: 4 (lower is better)
Translates to: PKETDSRALGWLKGQRKRGAASW*GPLSRG
Trigger: ACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCC...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTGTCCCTCTTCCTGCTTaGCACTCAGCGTGGCTCCCG +
Preference number: 4 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETVPLPA*HSAWLP
Trigger: CGGGAGCCACGCTGAGTGGCAAGCAGGAAGAGGGAC...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCAGGTGAGCAGGCATGCTaGGGAAGGAGCCAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPGEQAC*GRSQEA
Trigger: GGCTTCTTGGCTCCTTCCGCAGCATGCCTGCTCACC...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp TGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCTCTAACCACATCCAGCTGCCGGAGAGCCTCGGCGTaGCAGGTGTGCATCCAGGCC +
Preference number: 4 (lower is better)
Translates to: CRKSNLPIQPIPLTTSSCRRASA*QVCIQA
Trigger: GGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCG...GCAGCTGGATGTGGTTAGAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGTACTGTGAGGAGCCTTaGCCAGAGCCTGGTCATGGT +
Preference number: 4 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGYCEEP*PEPGHG
Trigger: ACCATGACCAGGCTCTGGGCAAGGCTCCTCACAGTA...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCGCACCTCAGAGCTGCTaGCAAGCTGATGTTCTCCAA +
Preference number: 4 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGAPQSC*QADVLQ
Trigger: TTGGAGAACATCAGCTTGCCAGCAGCTCTGAGGTGC...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGATGCACAGAGGCCCTaGTTGATGGTAAAATTGATG +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSDAQRP*LMVKLM
Trigger: CATCAATTTTACCATCAACCAGGGCCTCTGTGCATC...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp CCTGCTTGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCTGGTGGAAGGGTTTGCTCTGTaGAGGACTCTGTTAAGGATG +
Preference number: 4 (lower is better)
Translates to: PACHSAWLPTNPGRSLLVEGFAL*RTLLRM
Trigger: CATCCTTAACAGAGTCCTCCACAGAGCAAACCCTTC...CACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTTCTAGTGGTCTGCCCTaGCTAATAGTCGCCCTGGTG +
Preference number: 4 (lower is better)
Translates to: RARCASRPLLLSGVSPRPSSGLP*LIVALV
Trigger: CACCAGGGCGACTATTAGCCAGGGCAGACCACTAGA...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGCCAAATTGCTGCCTATaGAAGTGTCTCGGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: GRRASACQVCIQASSAIRPNCCL*KCLGKG
Trigger: TCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGG...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp AGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGAGCAACACATTTCCTCACTGTaGGGGCTGGCTTGGAAACTG +
Preference number: 4 (lower is better)
Translates to: SLLVRSSEQRSQVTGSEQHISSL*GLAWKL
Trigger: CAGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTG...TTGCTCTGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTAATAGCCTCCCTACATaGCTCTTCCCACAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: RARCASRPLLLSGVSPRPNSLPT*LFPQLR
Trigger: CCGCAGCTGTGGGAAGAGCCATGTAGGGAGGCTATT...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp TGTCTGGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTACCCGGCTCCTCTCTATaGAGGTTTAAGCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: CLGGEPRRARCASRPLLLPGSSL*RFKHLL
Trigger: CAAGAGATGCTTAAACCTCCATAGAGAGGAGCCGGG...TAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCTCTTTCATCGAACTCTaGACTGCTGGATGGCAGGTG +
Preference number: 4 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGSFIEL*TAGWQV
Trigger: CACCTGCCATCCAGCAGTTCAGAGTTCGATGAAAGA...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCGAACTGGGTCAACACTaGAGCATTCACACCTTCAGG +
Preference number: 4 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGELGQH*SIHTFR
Trigger: CCTGAAGGTGTGAATGCTTCAGTGTTGACCCAGTTC...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTTTGGTGAAAGTAGATaGCAGGTAGGTGTGGTCTGT +
Preference number: 4 (lower is better)
Translates to: GRRASACQVCIQASSAIRFGESR*QVGVVC
Trigger: ACAGACCACACCTACCTGTCATCTACTTTCACCAAA...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGGGTCATTTCTTTTGCTaGTGTGGGTACACTGGTCAA +
Preference number: 4 (lower is better)
Translates to: GRRASACQVCIQASSAIRGHFFC*CGYTGQ
Trigger: TTGACCAGTGTACCCACATCAGCAAAAGAAATGACC...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGCAGATAAAGGATCCCTaGGTATTGTTGCACATGGCT +
Preference number: 4 (lower is better)
Translates to: GRRASACQVCIQASSAIRQIKDP*VLLHMA
Trigger: AGCCATGTGCAACAATACTCAGGGATCCTTTATCTG...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp CAGCCTGTGGTTCCACATCCACCTGTCTCCTCCACTGTGGTCACGCCCCGCATGAATGCAAGAATGCCGTaGTCCTGGCAGTCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: QPVVPHPPVSSTVVTPRMNARMP*SWQSSV
Trigger: TACACTGGACTGCCAGGATCACGGCATTCTTGCATT...CATGCGGGGCGTGACCACAGTGGAGGAGACAGGTGGATGTGGAACCACAGGCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp ACTGTCCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTAGCAGAGGTCCCAGGTaGCTGGCTCAGAGCAATGAG +
Preference number: 4 (lower is better)
Translates to: TVPSGCTISRNVKRDSPLSRGPR*LAQSNE
Trigger: CTCATTGCTCTGAGCCAGTCACCTGGGACCTCTGCT...AAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGGACAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCCCTGGTGCGGTCCTCTaGGCAGAGGTCCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: SSDFSGTLILICCLARRRPGAVL*AEVPGD
Trigger: GTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGG...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCTACGGAAGAAACCCATaGACAAGAAGCATTGTTGGA +
Preference number: 4 (lower is better)
Translates to: SPRPRRDPSAARNPVQECYGRNP*TRSIVG
Trigger: TCCAACAATGCTTCTTGTTCATGGGTTTCTTCCGTA...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCCTTAAACCAAACCACTaGTGCCAGGGAGCCAGCCAG +
Preference number: 4 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPLKPNH*CQGASQ
Trigger: CTGGCTGGCTCCCTGGCATCAGTGGTTTGGTTTAAG...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACTCCTCCATACGCAGCTaGCTCTGGCCTCCACAATGG +
Preference number: 4 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHSSIRS*LWPPQW
Trigger: CCATTGTGGAGGCCAGAGGCAGCTGCGTATGGAGGA...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GTTCCCCAGGTGGCAATTAAAGACACCGAGTACTGGATGTCTCCCTGGCAGGACTCGGCGTGCCAGGTGTaGATCCAGGCCTCTTCTGCT +
Preference number: 4 (lower is better)
Translates to: VPQVAIKDTEYWMSPWQDSACQV*IQASSA
Trigger: AGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGA...GTCCTGCCAGGGAGACATCCAGTACTCGGTGTCTTTAATTGCCACCTGGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CATCACTTGCCCCTTCCTCTCACCTTCCCCCATCTGTGGGATATTGGTGCAGGAACACACAGATGCCCCTaGGCCCGGCTCCTCTCTATG +
Preference number: 4 (lower is better)
Translates to: HHLPLPLTFPHLWDIGAGTHRCP*ARLLSM
Trigger: CATAGAGAGGAGCCGGGCGCAGGGGCATCTGTGTGT...TCCTGCACCAATATCCCACAGATGGGGGAAGGTGAGAGGAAGGGGCAAGTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp AGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGAGCAACTAAGTTGGTGCTTGTaGCTGGAAGGGTTTGCTCTG +
Preference number: 4 (lower is better)
Translates to: SLLVRSSEQRSQVTGSEQLSWCL*LEGFAL
Trigger: CAGAGCAAACCCTTCCAGCCACAAGCACCAACTTAG...TTGCTCTGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGCAAAGGTGGCAGATTTaGGAGCCAAGTCTTCAGCCG +
Preference number: 4 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGQRWQI*EPSLQP
Trigger: CGGCTGAAGACTTGGCTCCCAAATCTGCCACCTTTG...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp AGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGAGCAAACCACCAAGGCCAAATaGGCAACTCATGCAGGTTTC +
Preference number: 4 (lower is better)
Translates to: SLLVRSSEQRSQVTGSEQTTKAK*ATHAGF
Trigger: GAAACCTGCATGAGTTGCCCATTTGGCCTTGGTGGT...TTGCTCTGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGCATACGGGGACATTTaGAAATCTCCACTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSAYGDI*KSPLLK
Trigger: CTTCAAAAGTGGAGATTTCCAAATGTCCCCGTATGC...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000482699.1
ENST00000487661.1
CDS-3UTR CCA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCTACTGGATGTCTCCCTaGCAGGACCCACATCACAGG +
Preference number: 4 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPYWMSP*QDPHHR
Trigger: CCTGTGATGTGGGTCCTGCCAGGGAGACATCCAGTA...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGAGTGCAGGGGCTGACATaGAGCACTGTGTCTGGGCGG +
Preference number: 4 (lower is better)
Translates to: PKETDSRALGWLKGQRKRVQGLT*STVSGR
Trigger: CCGCCCAGACACAGTGCTCCATGTCAGCCCCTGCAC...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp AGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGAGCAAACCTTCCCCCATCTGTaGGATATTGGTGCAGGATTG +
Preference number: 4 (lower is better)
Translates to: SLLVRSSEQRSQVTGSEQTFPHL*DIGAGL
Trigger: CAATCCTGCACCAATATCCCACAGATGGGGGAAGGT...TTGCTCTGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp AGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGAGCAATCTGTACCTGAGAAATaGGCACTTCCATGCCCACCT +
Preference number: 4 (lower is better)
Translates to: SLLVRSSEQRSQVTGSEQSVPEK*ALPCPP
Trigger: AGGTGGGCATGGAAGTGCCCATTTCTCAGGTACAGA...TTGCTCTGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGAGTGGGCAGAGTAGCTaGGGGAGTCAGGCAGACAAG +
Preference number: 4 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWSGQSS*GSQADK
Trigger: CTTGTCTGCCTGACTCCCCCAGCTACTCTGCCCACT...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCAAGAGCCAGTGTGCAGTaGTCTCTCCACCTCTCATGG +
Preference number: 4 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPRASVQ*SLHLSW
Trigger: CCATGAGAGGTGGAGAGATCACTGCACACTGGCTCT...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCACTAAAGATCCGCCTCTaGGATCCCAAGAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPLKIRL*DPKSWQ
Trigger: CTGCCAGCTCTTGGGATCTCAGAGGCGGATCTTTAG...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGAATGCAAGAATGCCGTaGTCCTGGCAGTCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGNARMP*SWQSSV
Trigger: TACACTGGACTGCCAGGATCACGGCATTCTTGCATT...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GGCCGGGTAGAGTCCGTTTCGTTCAAGTTCTGGATTCCTTACACTTGTAGGCTTCCTGGTGCGGTCCTCTaGGCAGAGGTCCCAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GRVESVSFKFWIPYTCRLPGAVL*AEVPGD
Trigger: GTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGG...AAGCCTACAAGTGTAAGGAATCCAGAACTTGAACGAAACGGACTCTACCCGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000482699.1
CDS-3UTR TCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAAAAAAGGCGACACTTTaGAATTTTAGGTTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSKKATL*NFRLAS
Trigger: GGAGGCTAACCTAAAATTTCAAAGTGTCGCCTTTTT...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTCATCGAACTCTGAACTaGTGGATGGCAGGTGAAGAC +
Preference number: 4 (lower is better)
Translates to: RARCASRPLLLSGVSPRPHRTLN*WMAGED
Trigger: GTCTTCACCTGCCATCCAGCAGTTCAGAGTTCGATG...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCGGTCAAGAGCCAGTGTaGAGTGATCTCTCCACCTCT +
Preference number: 4 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPGQEPV*SDLSTS
Trigger: AGAGGTGGAGAGATCACTGCACACTGGCTCTTGACC...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp AGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGAGCAACATCTGCAGATGTTGTaGTGTTGGTCAAGAGCCAGT +
Preference number: 4 (lower is better)
Translates to: SLLVRSSEQRSQVTGSEQHLQML*CWSRAS
Trigger: ACTGGCTCTTGACCAACAGCACAACATCTGCAGATG...TTGCTCTGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp ACTGTCCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTACGGCTGGTGTTGTCTaGGACGCATTCGCCATTGTG +
Preference number: 4 (lower is better)
Translates to: TVPSGCTISRNVKRDSPLTAGVV*DAFAIV
Trigger: CACAATGGCGAATGCGTCGCAGACAACACCAGCCGT...AAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGGACAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCAGGAAGGCGGGCACCTaGAGTGGTAGCCACGGCTGG +
Preference number: 4 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSRKAGT*SGSHGW
Trigger: CCAGCCGTGGCTACCACTGCAGGTGCCCGCCTTCCT...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGCATTCACATCCACACTaGAATCATCCCCTTGCCAGG +
Preference number: 4 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGHSHPH*NHPLAR
Trigger: CCTGGCAAGGGGATGATTGCAGTGTGGATGTGAATG...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp TGTCTGGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTAGAGTTGACACATTTCTaGATCCTATCAGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: CLGGEPRRARCASRPLLLELTHF*ILSARS
Trigger: TGACCTGGCTGATAGGATGCAGAAATGTGTCAACTC...TAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCGAATCACCAAATTGCTaGCTATGGAAGTGTCTCGGG +
Preference number: 4 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGESPNC*LWKCLG
Trigger: CCCGAGACACTTCCATAGGCAGCAATTTGGTGATTC...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTATGCAGTTGTGTGCGGTaGCTCACACATTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: DGEGCARTVRQGATVGRVCSCVR*LTHFLT
Trigger: AGTGAGGAAATGTGTGAGGCACCGCACACAACTGCA...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGAGGTGAGCAGGCATGCTaGGGAAGGAGCCAAGAAGCC +
Preference number: 4 (lower is better)
Translates to: PKETDSRALGWLKGQRKRGEQAC*GRSQEA
Trigger: GGCTTCTTGGCTCCTTCCGCAGCATGCCTGCTCACC...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp TGTCTGGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTAACTGGGTCACAGACATaGTTTACTCATGTCCCCTTA +
Preference number: 4 (lower is better)
Translates to: CLGGEPRRARCASRPLLLTGSQT*FTHVPL
Trigger: TAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGT...TAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCCAGCTAGGAACCCCGTaGAGGAGTGCAGCTGGCCTC +
Preference number: 4 (lower is better)
Translates to: SSDFSGTLILICCLARRRQLGTP*RSAAGL
Trigger: GAGGCCAGCTGCACTCCTGCACGGGGTTCCTAGCTG...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTCAGTGTTACTTTCTaGCCAATGTTTCCAGGCAGC +
Preference number: 4 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGLSVTF*PMFPGS
Trigger: GCTGCCTGGAAACATTGGCCAGAAAGTAACACTGAG...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCGAACTCTGAACTGCTaGATGGCAGGTGAAGACTTT +
Preference number: 4 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGRTLNC*MAGEDF
Trigger: AAAGTCTTCACCTGCCATCCAGCAGTTCAGAGTTCG...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGATGTTCTCCAAAGGTTaGGGAATCATTTTGCCAACG +
Preference number: 4 (lower is better)
Translates to: GRRASACQVCIQASSAIRMFSKG*GIILPT
Trigger: CGTTGGCAAAATGATTCCCCAACCTTTGGAGAACAT...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp CAGCCTGTGGTTCCACATCCACCTGTCTCCTCCACTGTGGTCACGCCCCGCATGCTGATGTGGGTACACTaGTCAAAGGGATCAATCCAG +
Preference number: 4 (lower is better)
Translates to: QPVVPHPPVSSTVVTPRMLMWVH*SKGSIQ
Trigger: CTGGATTGATCCCTTTGACCAGTGTACCCACATCAG...CATGCGGGGCGTGACCACAGTGGAGGAGACAGGTGGATGTGGAACCACAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp CAGCCTGTGGTTCCACATCCACCTGTCTCCTCCACTGTGGTCACGCCCCGCATGCAAATAGCGTCACATTaGAGGCCAGGGAAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: QPVVPHPPVSSTVVTPRMQIASH*RPGKRL
Trigger: CAACCTTTTCCCTGGCCTCCAATGTGACGCTATTTG...CATGCGGGGCGTGACCACAGTGGAGGAGACAGGTGGATGTGGAACCACAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTAGTGAGCGAGGATTTTTaGGGTATTCAGCATACGGGG +
Preference number: 4 (lower is better)
Translates to: DGEGCARTVRQGATVGRVVSEDF*GIQHTG
Trigger: CCCCGTATGCTGAATACCCCAAAAATCCTCGCTCAC...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTCTGGAGGAGGTTTTTaGTACTTCCATTCTCATGCA +
Preference number: 4 (lower is better)
Translates to: GRRASACQVCIQASSAIRSGGGF*YFHSHA
Trigger: TGCATGAGAATGGAAGTACCAAAAACCTCCTCCAGA...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTGAGGTCCCAGGTGACTaGCTCAGAGCAATGAGTCCC +
Preference number: 4 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETEVPGD*LRAMSP
Trigger: GGGACTCATTGCTCTGAGCCAGTCACCTGGGACCTC...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp TGTCTGGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTAGTGGACATGAGATTCTaGGTACAAAGTGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: CLGGEPRRARCASRPLLLVDMRF*VQSAAV
Trigger: TACTGCAGCACTTTGTACCCAGAATCTCATGTCCAC...TAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp AGCCTTGCCCAGAGCCTGGTCATGGTAGGAGCATGTCAGTTCATCCGCCTAAAGAGTGGGCAGAGTAGCTaGGGGAGTCAGGCAGACAAG +
Preference number: 4 (lower is better)
Translates to: SLAQSLVMVGACQFIRLKSGQSS*GSQADK
Trigger: CTTGTCTGCCTGACTCCCCCAGCTACTCTGCCCACT...CTTTAGGCGGATGAACTGACATGCTCCTACCATGACCAGGCTCTGGGCAAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGCAAGGGCAACTGGAGTaGACAGCTCCTCTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWQGQLE*TAPLPQ
Trigger: CTGAGGAAGAGGAGCTGTCCACTCCAGTTGCCCTTG...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACTCTCATGGGTGCGACTaGCCTAGACACAGTCTCAGT +
Preference number: 4 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHSHGCD*PRHSLS
Trigger: ACTGAGACTGTGTCTAGGTCAGTCGCACCCATGAGA...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGCCTTCTGTTGAGATTTaGGGAACTAGTATTTCAGGA +
Preference number: 4 (lower is better)
Translates to: GRRASACQVCIQASSAIRPSVEI*GTSISG
Trigger: TCCTGAAATACTAGTTCCTCAAATCTCAACAGAAGG...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCAAAGGTTGTTTGCAGTaGGATCACCACCGCGTTGGA +
Preference number: 4 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPKGCLQ*DHHRVG
Trigger: TCCAACGCGGTGGTGATCTCACTGCAAACAACCTTT...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GGAAAATGCAAGAATGCCGTGATCCTGGCAGTCCAGTGTAGGCCGGGTAGAGTCACTGGCTCAGAGCAATaGGTCCCTCTCTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GKCKNAVILAVQCRPGRVTGSEQ*VPLSPG
Trigger: TCCAGGAGAGAGAGGGACTCATTGCTCTGAGCCAGT...GACTCTACCCGGCCTACACTGGACTGCCAGGATCACGGCATTCTTGCATTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482699.1
CDS-3UTR TCA 90 bp GTTCCCCAGGTGGCAATTAAAGACACCGAGTACTGGATGTCTCCCTGGCAGGACACTGGCTCAGAGCAATaGGTCCCTCTCTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: VPQVAIKDTEYWMSPWQDTGSEQ*VPLSPG
Trigger: TCCAGGAGAGAGAGGGACTCATTGCTCTGAGCCAGT...GTCCTGCCAGGGAGACATCCAGTACTCGGTGTCTTTAATTGCCACCTGGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCAACAAAGGTGCTGAATaGGCAGCCTGTGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPNKGAE*AACGST
Trigger: TGTGGAACCACAGGCTGCTCATTCAGCACCTTTGTT...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CCTGCTTGCCACTCAGCGTGGCTCCCGACAAATCCTGGGCGCAGCCTCCTGGTGGTATTTTGCTGCAAATaGATCACCAAATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: PACHSAWLPTNPGRSLLVVFCCK*ITKLLP
Trigger: AGGCAGCAATTTGGTGATTCATTTGCAGCAAAATAC...CACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTATGGGGTTTGTGGACATaGGATTCTGGGTACAAAGTG +
Preference number: 4 (lower is better)
Translates to: DGEGCARTVRQGATVGRVWGLWT*DSGYKV
Trigger: CACTTTGTACCCAGAATCTCATGTCCACAAACCCCA...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCCCGAATAAACAGCTTTaGGTGGTTGAAAGTTTACAT +
Preference number: 4 (lower is better)
Translates to: SPRPRRDPSAARNPVQECPNKQL*VVESLH
Trigger: ATGTAAACTTTCAACCACTCAAAGCTGTTTATTCGG...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CAGCCTGTGGTTCCACATCCACCTGTCTCCTCCACTGTGGTCACGCCCCGCATGTTCATTTTGTGGAGCTaGAGTCTTCTGGCTCCGATA +
Preference number: 4 (lower is better)
Translates to: QPVVPHPPVSSTVVTPRMFILWS*SLLAPI
Trigger: TATCGGAGCCAGAAGACTTCAGCTCCACAAAATGAA...CATGCGGGGCGTGACCACAGTGGAGGAGACAGGTGGATGTGGAACCACAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACCAGTGTGCTTCTTGCTaGGCACAAGCCAGCCACTAT +
Preference number: 4 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHQCASC*AQASHY
Trigger: ATAGTGGCTGGCTTGTGCTCAGCAAGAAGCACACTG...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAAAATCCAGGACAACATaGAAACTCCCAAAGTTCATA +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSKSRTT*KLPKFI
Trigger: TATGAACTTTGGGAGTTTTCATGTTGTCCTGGATTT...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp AGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGAGCAACTGGCTCTTAAGGTCTaGAGTTTGACTACTATGGAG +
Preference number: 4 (lower is better)
Translates to: SLLVRSSEQRSQVTGSEQLALKV*SLTTME
Trigger: CTCCATAGTAGTCAAACTGCAGACCTTAAGAGCCAG...TTGCTCTGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTTTGTTGGTGACTGTGTaGTGCTCTGAACAGCAAAGG +
Preference number: 4 (lower is better)
Translates to: RARCASRPLLLSGVSPRPLLVTV*CSEQQR
Trigger: CCTTTGCTGTTCAGAGCAGCACACAGTCACCAACAA...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp GTTCCCCAGGTGGCAATTAAAGACACCGAGTACTGGATGTCTCCCTGGCAGGACGAAAGTATCCCGACTTaGACTGGCACAGGGCAACGC +
Preference number: 4 (lower is better)
Translates to: VPQVAIKDTEYWMSPWQDESIPT*TGTGQR
Trigger: GCGTTGCCCTGTGCCAGTGCAAGTCGGGATACTTTC...GTCCTGCCAGGGAGACATCCAGTACTCGGTGTCTTTAATTGCCACCTGGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTGAAAGTATCCCGACTTaGACTGGCACAGGGCAACGC +
Preference number: 4 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETESIPT*TGTGQR
Trigger: GCGTTGCCCTGTGCCAGTGCAAGTCGGGATACTTTC...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp ACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGTGGAGACAATTCTCCCACCTCCCGCGGCTaGGATCACCACAGTGATAAG +
Preference number: 4 (lower is better)
Translates to: TISRNVKRDSPLQGGDNSPTSRG*DHHSDK
Trigger: CTTATCACTGTGGTGATCGCAGCCGCGGGAGGTGGG...AGAATTGTCTCCACCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCTGGTCACGCCCCGCATaGCTGTCCCTCTTCCTGCTT +
Preference number: 4 (lower is better)
Translates to: SSDFSGTLILICCLARRRWSRPA*LSLFLL
Trigger: AAGCAGGAAGAGGGACAGGCATGCGGGGCGTGACCA...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCTGCAGTTGTGTGCGGTaGCTCACACATTTCCTCACT +
Preference number: 4 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPCSCVR*LTHFLT
Trigger: AGTGAGGAAATGTGTGAGGCACCGCACACAACTGCA...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGCTCATGGATGAAAAGTaGCCCCCTGCCTGCAATCTG +
Preference number: 4 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWLMDEK*PPACNL
Trigger: CAGATTGCAGGCAGGGGGGCACTTTTCATCCATGAG...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGTTGAAGAAACAACCATaGCCGGGGCAGAACTGTCCC +
Preference number: 4 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWLKKQP*PGQNCP
Trigger: GGGACAGTTCTGCCCCGGGCATGGTTGTTTCTTCAA...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACGGCAGTGGAAGTGTATaGCTGGGAATAGCCTCCCTA +
Preference number: 4 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHGSGSV*LGIASL
Trigger: TAGGGAGGCTATTCCCAGGCATACACTTCCACTGCC...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CAGCCTGTGGTTCCACATCCACCTGTCTCCTCCACTGTGGTCACGCCCCGCATGACTGGGTCACAGACATaGTTTACTCATGTCCCCTTA +
Preference number: 4 (lower is better)
Translates to: QPVVPHPPVSSTVVTPRMTGSQT*FTHVPL
Trigger: TAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGT...CATGCGGGGCGTGACCACAGTGGAGGAGACAGGTGGATGTGGAACCACAGGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp ACTGTCCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCATCCAGGCCTCTTCTaGTATCAGGTGTTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: TVPSGCTISRNVKRDSPLHPGLF*YQVFPL
Trigger: GAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATG...AAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGGACAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGCATCCAGGCCTCTTCTaGTATCAGGTGTTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWHPGLF*YQVFPL
Trigger: GAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATG...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCATGGTGTGGGGTGCTCTaGCTCTTAAGGTCTGCAGTT +
Preference number: 4 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPWCGVL*LLRSAV
Trigger: AACTGCAGACCTTAAGAGCCAGAGCACCCCACACCA...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTACATTTGTGCTAAGTTaGTGCTTGTGGCTGGAAGGG +
Preference number: 4 (lower is better)
Translates to: RARCASRPLLLSGVSPRPTFVLS*CLWLEG
Trigger: CCCTTCCAGCCACAAGCACCAACTTAGCACAAATGT...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTATCCCTTTTTCCAACTaGTACCCAACCGGGCATTTG +
Preference number: 4 (lower is better)
Translates to: RARCASRPLLLSGVSPRPIPFSN*YPTGHL
Trigger: CAAATGCCCGGTTGGGTACCAGTTGGAAAAAGGGAT...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp GTCCGGGGAAAATGCAAGAATGCCGTGATCCTGGCAGTCCAGTGTAGGCCGGGTGTGAGCGAGGATTTTTaGGGTATTCAGCATACGGGG +
Preference number: 4 (lower is better)
Translates to: VRGKCKNAVILAVQCRPGVSEDF*GIQHTG
Trigger: CCCCGTATGCTGAATACCCCAAAAATCCTCGCTCAC...ACCCGGCCTACACTGGACTGCCAGGATCACGGCATTCTTGCATTTTCCCCGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482699.1
CDS-3UTR CCA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCGCTTGCCACTCAGCGTaGCTCCCGACAAATCCTGGG +
Preference number: 4 (lower is better)
Translates to: SSDFSGTLILICCLARRRACHSA*LPTNPG
Trigger: CCCAGGATTTGTCGGGAGCCACGCTGAGTGGCAAGC...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCATCTTCAGACTTCAGTaGTACGCTCATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGIFRLQ*YAHPHL
Trigger: CAGATGAGGATGAGCGTACCACTGAAGTCTGAAGAT...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCACACTGTCCGTTCAATaGCGACATCTTCAGACTTCA +
Preference number: 4 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGTLSVQ*RHLQTS
Trigger: TGAAGTCTGAAGATGTCGCCATTGAACGGACAGTGT...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp AGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGAGCAAACACTGTCCGTTCAATaGCGACATCTTCAGACTTCA +
Preference number: 4 (lower is better)
Translates to: SLLVRSSEQRSQVTGSEQTLSVQ*RHLQTS
Trigger: TGAAGTCTGAAGATGTCGCCATTGAACGGACAGTGT...TTGCTCTGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACCACATTTCCTCACTGTaGGGGCTGGCTTGGAAACTG +
Preference number: 4 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHHISSL*GLAWKL
Trigger: CAGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTG...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp ACTGGGTCACAGACATGCTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGTCCCAGGCCCCAGGCTaGGCCCTCATGGATGAAAAG +
Preference number: 4 (lower is better)
Translates to: TGSQTCFTHVPLEPHALESQAPG*ALMDEK
Trigger: CTTTTCATCCATGAGGGCCCAGCCTGGGGCCTGGGA...CTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCAAAAGACACCGAGTACTaGATGTCTCCCTGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPKDTEY*MSPWQD
Trigger: GTCCTGCCAGGGAGACATCCAGTACTCGGTGTCTTT...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp TGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCTCTAACCACATCCAGCTGCGTGCAGGAGTGCAGCTaGCCTCTCCCTTCCTCACTG +
Preference number: 4 (lower is better)
Translates to: CRKSNLPIQPIPLTTSSCVQECS*PLPSSL
Trigger: CAGTGAGGAAGGGAGAGGCCAGCTGCACTCCTGCAC...GCAGCTGGATGTGGTTAGAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTCAAGCAGCTCTCAGATaGATGTGTATGTCTGACTGC +
Preference number: 4 (lower is better)
Translates to: RARCASRPLLLSGVSPRPQAALR*MCMSDC
Trigger: GCAGTCAGACATACACATCCATCTGAGAGCTGCTTG...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTCCAAAAAGCCACACGTaGTGGGTGACCCAAAGGTGC +
Preference number: 4 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETPKSHT*WVTQRC
Trigger: GCACCTTTGGGTCACCCACCACGTGTGGCTTTTTGG...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp TGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCTCTAACCACATCCAGCTGCTGTTCCGAGGGAACGTaGAGCTGGGCTGTACTCTGC +
Preference number: 4 (lower is better)
Translates to: CRKSNLPIQPIPLTTSSCCSEGT*SWAVLC
Trigger: GCAGAGTACAGCCCAGCTTCACGTTCCCTCGGAACA...GCAGCTGGATGTGGTTAGAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTTCCATCTTGTTGAACTaGAAGTATCCCGACTTGCAC +
Preference number: 4 (lower is better)
Translates to: RARCASRPLLLSGVSPRPSILLN*KYPDLH
Trigger: GTGCAAGTCGGGATACTTTCAGTTCAACAAGATGGA...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCAAAAATGCACCTCCCCTaGCTAGGACTCTTGCTACAG +
Preference number: 4 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPKMHLP*LGLLLQ
Trigger: CTGTAGCAAGAGTCCTAGTCAGGGGAGGTGCATTTT...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGAAAATGCACCTCCCCTaGCTAGGACTCTTGCTACAG +
Preference number: 4 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWKMHLP*LGLLLQ
Trigger: CTGTAGCAAGAGTCCTAGTCAGGGGAGGTGCATTTT...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CAGCCTGTGGTTCCACATCCACCTGTCTCCTCCACTGTGGTCACGCCCCGCATGGCTATTTATCCTCTCTaGAGGTTTCTGTACCTGAGA +
Preference number: 4 (lower is better)
Translates to: QPVVPHPPVSSTVVTPRMAIYPL*RFLYLR
Trigger: TCTCAGGTACAGAAACCTTCAGAGAGGATAAATAGC...CATGCGGGGCGTGACCACAGTGGAGGAGACAGGTGGATGTGGAACCACAGGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp ACTGTCCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTAGCTGGGCTGTACTCTaGTGTAACGCCAAGCTTTGT +
Preference number: 4 (lower is better)
Translates to: TVPSGCTISRNVKRDSPLSWAVL*CNAKLC
Trigger: ACAAAGCTTGGCGTTACAGCAGAGTACAGCCCAGCT...AAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCGCCTGTCCCTCTTCCTaGTTGCCACTCAGCGTGGCT +
Preference number: 4 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSACPSS*LPLSVA
Trigger: AGCCACGCTGAGTGGCAAGCAGGAAGAGGGACAGGC...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAAAATATAAGTTGTTTTaGCCTGATCCAGGCTTGTTT +
Preference number: 4 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSKYKLF*PDPGLF
Trigger: AAACAAGCCTGGATCAGGGCAAAACAACTTATATTT...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCTCTGTGGGATATTGGTaGAGGATTGTGGCATCTGTG +
Preference number: 4 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPSVGYW*RIVASV
Trigger: CACAGATGCCACAATCCTGCACCAATATCCCACAGA...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCGGCTCCAAGCCGAAGTaGTGGCCTCTTGGCTGTGCA +
Preference number: 4 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSGSKPK*WPLGCA
Trigger: TGCACAGCCAAGAGGCCACCACTTCGGCTTGGAGCC...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp ACTGTCCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCTGAGGATGAAGTCGTaGCAATTCTGGAGTCCTTGG +
Preference number: 4 (lower is better)
Translates to: TVPSGCTISRNVKRDSPLLRMKS*QFWSPW
Trigger: CCAAGGACTCCAGAATTGCCACGACTTCATCCTCAG...AAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACGGATGTATGCAGAACTaGCGACTCAGTAGAAGGCTG +
Preference number: 4 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHGCMQN*RLSRRL
Trigger: CAGCCTTCTACTGAGTCGCCAGTTCTGCATACATCC...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCTTGTTGTTACAGCTTTaGTGGACTCTGTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPLLLQL*WTLWAE
Trigger: CTCTGCCCACAGAGTCCACCAAAGCTGTAACAACAA...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCGAAACAACTGTGGTTTaGGGAGAAGGAGATGTTCCG +
Preference number: 4 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPETTVV*GEGDVP
Trigger: CGGAACATCTCCTTCTCCCCAAACCACAGTTGTTTC...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCTATCCCGACTTGCACTaGCACAGGGCAACGCCGTCC +
Preference number: 4 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFIYPDLH*HRATPS
Trigger: GGACGGCGTTGCCCTGTGCCAGTGCAAGTCGGGATA...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCTACACATCCGTCATCTaGAGGAGGTTTTTGGTACTT +
Preference number: 4 (lower is better)
Translates to: GVPGVHPGLFCYQVFPLGYTSVI*RRFLVL
Trigger: AAGTACCAAAAACCTCCTCCAGATGACGGATGTGTA...GCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGACTGGTGCCAGTGCCATaGTGCAGTCACTCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PKETDSRALGWLKGQRKRLVPVP*CSHSER
Trigger: TCTCTCTGAGTGACTGCACCATGGCACTGGCACCAG...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCCCAAATTGCTGCCTATaGAAGTGTCTCGGGAAAGGA +
Preference number: 4 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPPNCCL*KCLGKG
Trigger: TCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGG...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
54% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp ACTGTCCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGAACTGTCCCCAGTaGCTGCACCATTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: TVPSGCTISRNVKRDSPLQNCPQ*LHHFQK
Trigger: TTTCTGGAAATGGTGCAGCCACTGGGGACAGTTCTG...AAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGGACAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CATCACTTGCCCCTTCCTCTCACCTTCCCCCATCTGTGGGATATTGGTGCAGGAGAGTGGTGGAGACCATaGGACACAGGAGTTCTTGCT +
Preference number: 4 (lower is better)
Translates to: HHLPLPLTFPHLWDIGAGEWWRP*DTGVLA
Trigger: AGCAAGAACTCCTGTGTCCCATGGTCTCCACCACTC...TCCTGCACCAATATCCCACAGATGGGGGAAGGTGAGAGGAAGGGGCAAGTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp AGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGAGCAAAACAAGAAGCATTGTTaGAACTCACAGGACACCGTT +
Preference number: 4 (lower is better)
Translates to: SLLVRSSEQRSQVTGSEQNKKHC*NSQDTV
Trigger: AACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGTT...TTGCTCTGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp ACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACATGGAGCACTGTGTCTaGGCGGAGAGCCTCGGCGTG +
Preference number: 4 (lower is better)
Translates to: TKLLPMEVSRERKPSFWNMEHCV*AESLGV
Trigger: CACGCCGAGGCTCTCCGCCCAGACACAGTGCTCCAT...GTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCACCCGGCTCCTCTCTATaGAGGTTTAAGCATCTCTTG +
Preference number: 4 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPPGSSL*RFKHLL
Trigger: CAAGAGATGCTTAAACCTCCATAGAGAGGAGCCGGG...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCATCTGTACCTGAGAAATaGGCACTTCCATGCCCACCT +
Preference number: 4 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPSVPEK*ALPCPP
Trigger: AGGTGGGCATGGAAGTGCCCATTTCTCAGGTACAGA...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGACTGCTGGATGGCAGGTaGAGACTTTCTGAGGCTAAG +
Preference number: 4 (lower is better)
Translates to: PKETDSRALGWLKGQRKRLLDGR*RLSEAK
Trigger: CTTAGCCTCAGAAAGTCTTCACCTGCCATCCAGCAG...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCATGCATTGTCTTTGTTTaGCTGACTGAGGAGCTCTGG +
Preference number: 4 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPCIVFV*LTEELW
Trigger: CCAGAGCTCCTCAGTCAGTCAAACAAAGACAATGCA...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTTCTCCCAATGCTGTGTaGCTTCCTCCAGACTGTACA +
Preference number: 4 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETSPNAV*LPPDCT
Trigger: TGTACAGTCTGGAGGAAGTCACACAGCATTGGGAGA...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp ACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGTGGAGACAATTCTACTGGCTCAGAGCAATaGGTCCCTCTCTCTCCTGGA +
Preference number: 4 (lower is better)
Translates to: TISRNVKRDSPLQGGDNSTGSEQ*VPLSPG
Trigger: TCCAGGAGAGAGAGGGACTCATTGCTCTGAGCCAGT...AGAATTGTCTCCACCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCAGCAGAGGTCCCAGGTaGCTGGCTCAGAGCAATGAG +
Preference number: 4 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFISRGPR*LAQSNE
Trigger: CTCATTGCTCTGAGCCAGTCACCTGGGACCTCTGCT...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTAACAAAGGTGCTGAATaGGCAGCCTGTGGTTCCACA +
Preference number: 4 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETNKGAE*AACGST
Trigger: TGTGGAACCACAGGCTGCTCATTCAGCACCTTTGTT...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp AGCCTTGCCCAGAGCCTGGTCATGGTAGGAGCATGTCAGTTCATCCGCCTAAAGTCAGAGAGACTCTCTTaGTACTGGCCCACATTCACG +
Preference number: 4 (lower is better)
Translates to: SLAQSLVMVGACQFIRLKSERLS*YWPTFT
Trigger: CGTGAATGTGGGCCAGTATCAAGAGAGTCTCTCTGA...CTTTAGGCGGATGAACTGACATGCTCCTACCATGACCAGGCTCTGGGCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCATATTTAGAGGACCTTaGAGAAACAACCATGCCCGG +
Preference number: 4 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPIFRGP*RNNHAR
Trigger: CCGGGCATGGTTGTTTCTTCAAGGTCCTCTAAATAT...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCATTAGGTGCGAGGCCGTaGGCCACAAAGGGCCATTGG +
Preference number: 4 (lower is better)
Translates to: PHLLFSTQALGRKIINKPLGARP*ATKGHW
Trigger: CCAATGGCCCTTTGTGGCTCACGGCCTCGCACCTAA...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTGGTTTAAGCATCTCTTaGGCAGTTACACATCACTTG +
Preference number: 4 (lower is better)
Translates to: RARCASRPLLLSGVSPRPGLSIS*AVTHHL
Trigger: CAAGTGATGTGTAACTGCTCAAGAGATGCTTAAACC...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTAATGAGAACCTCAGAATaGCACTTTGTTAAGGGAGGA +
Preference number: 4 (lower is better)
Translates to: DGEGCARTVRQGATVGRVMRTSE*HFVKGG
Trigger: TCCTCCCTTAACAAAGTGTCATTCTGAGGTTCTCAT...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACGGAAGGTTGGATGTATaGAGAACTGGCGACTCAGTA +
Preference number: 4 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHGRLDV*RTGDSV
Trigger: TACTGAGTCGCCAGTTCTGCATACATCCAACCTTCC...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTAGGGAAAAGGTTGTTTaGAGTGAGATCACCACCGCG +
Preference number: 4 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETREKVV*SEITTA
Trigger: CGCGGTGGTGATCTCACTGCAAACAACCTTTTCCCT...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp ACTGTCCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTGGACACAGGAGTTCTTaGTTAAAACCATCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TVPSGCTISRNVKRDSPLGHRSS*LKPSGP
Trigger: TGGCCCTGATGGTTTTAAGCAAGAACTCCTGTGTCC...AAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGGACAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp AGCCTTGCCCAGAGCCTGGTCATGGTAGGAGCATGTCAGTTCATCCGCCTAAAGCAGTTACACATCACTTaGCCCTTCCTCTCACCTTCC +
Preference number: 4 (lower is better)
Translates to: SLAQSLVMVGACQFIRLKQLHIT*PFLSPS
Trigger: GGAAGGTGAGAGGAAGGGGCAAGTGATGTGTAACTG...CTTTAGGCGGATGAACTGACATGCTCCTACCATGACCAGGCTCTGGGCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp ACTGGGTCACAGACATGCTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGTACTGTGAGGAGCCTTaGCCAGAGCCTGGTCATGGT +
Preference number: 4 (lower is better)
Translates to: TGSQTCFTHVPLEPHALEYCEEP*PEPGHG
Trigger: ACCATGACCAGGCTCTGGGCAAGGCTCCTCACAGTA...CTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCAGCCACGTGCCAGTGTaGTTCTTGCTGAGCACAAGC +
Preference number: 4 (lower is better)
Translates to: SSDFSGTLILICCLARRRSHVPV*FLLSTS
Trigger: GCTTGTGCTCAGCAAGAAGCACACTGGCACGTGGCT...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp ACTGGGTCACAGACATGCTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGCTAGGAGTCCAAAGATaGTGCCTTCTCCCTTGGGCC +
Preference number: 4 (lower is better)
Translates to: TGSQTCFTHVPLEPHALELGVQR*CLLPWA
Trigger: GGCCCAAGGGAGAAGGCAGCATCTTTGGACTCCTAG...CTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGATGGGTGACCCAAAGGTaGCTGCTCTGGGAACTTTCA +
Preference number: 4 (lower is better)
Translates to: PKETDSRALGWLKGQRKRWVTQR*LLWELS
Trigger: TGAAAGTTCCCAGAGCAGGCACCTTTGGGTCACCCA...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCAGGCAACACAGTTTCATaGAGGCACCAAAAAGCCACA +
Preference number: 4 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPGNTVS*RHQKAT
Trigger: TGTGGCTTTTTGGTGCCTGCATGAAACTGTGTTGCC...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTCAGATGTTGTGCTGTTaGTCAAGAGCCAGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETQMLCC*SRASVQ
Trigger: CTGCACACTGGCTCTTGACCAACAGCACAACATCTG...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCTGTTGCACATGGCTGTaGATGGGCAGGGGTTCGACA +
Preference number: 4 (lower is better)
Translates to: SSDFSGTLILICCLARRRCCTWL*MGRGST
Trigger: TGTCGAACCCCTGCCCATCCACAGCCATGTGCAACA...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTATCTGGAGGAGGTTTTTaGTACTTCCATTCTCATGCA +
Preference number: 4 (lower is better)
Translates to: DGEGCARTVRQGATVGRVSGGGF*YFHSHA
Trigger: TGCATGAGAATGGAAGTACCAAAAACCTCCTCCAGA...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CAGCCTGTGGTTCCACATCCACCTGTCTCCTCCACTGTGGTCACGCCCCGCATGGTTTCGTTCAAGTTCTaGATTCCTTACACTTGTAGG +
Preference number: 4 (lower is better)
Translates to: QPVVPHPPVSSTVVTPRMVSFKF*IPYTCR
Trigger: CCTACAAGTGTAAGGAATCCAGAACTTGAACGAAAC...CATGCGGGGCGTGACCACAGTGGAGGAGACAGGTGGATGTGGAACCACAGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GAAACCCATGAACAAGAAGCATTGTTGGAACTCACAGGACACCGTTTTCTCGATGCTCCCGACAAATCCTaGGCGCAGCCTCCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: ETHEQEALLELTGHRFLDAPDKS*AQPPGA
Trigger: CGCACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGC...ATCGAGAAAACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGTTCATGGGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCATCCCAGGCCCCAGGCTaGGCCCTCATGGATGAAAAG +
Preference number: 4 (lower is better)
Translates to: PHLLFSTQALGRKIINKPSQAPG*ALMDEK
Trigger: CTTTTCATCCATGAGGGCCCAGCCTGGGGCCTGGGA...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GTTCCCCAGGTGGCAATTAAAGACACCGAGTACTGGATGTCTCCCTGGCAGGACCTCCCCGCTTCAGGGTaGAGACAATTCTTTTACCTC +
Preference number: 4 (lower is better)
Translates to: VPQVAIKDTEYWMSPWQDLPASG*RQFFYL
Trigger: GAGGTAAAAGAATTGTCTCCACCCTGAAGCGGGGAG...GTCCTGCCAGGGAGACATCCAGTACTCGGTGTCTTTAATTGCCACCTGGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CATCACTTGCCCCTTCCTCTCACCTTCCCCCATCTGTGGGATATTGGTGCAGGACAGAACTGTCCCCAGTaGCTGCACCATTTCCAGAAA +
Preference number: 4 (lower is better)
Translates to: HHLPLPLTFPHLWDIGAGQNCPQ*LHHFQK
Trigger: TTTCTGGAAATGGTGCAGCCACTGGGGACAGTTCTG...TCCTGCACCAATATCCCACAGATGGGGGAAGGTGAGAGGAAGGGGCAAGTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTAACAAGAAGCATTGTTaGAACTCACAGGACACCGTT +
Preference number: 4 (lower is better)
Translates to: RARCASRPLLLSGVSPRPNKKHC*NSQDTV
Trigger: AACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGTT...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGCCATCTGTGGGATATTaGTGCAGGATTGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWPSVGY*CRIVAS
Trigger: AGATGCCACAATCCTGCACCAATATCCCACAGATGG...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCTCCAGGGCCTTAGGCTaGCTCAAGGGGCAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSSRALG*LKGQRK
Trigger: TTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGA...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCCAAAGGTGCCTGCTCTaGGAACTTTCACATCTGAAT +
Preference number: 4 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPQRCLL*ELSHLN
Trigger: ATTCAGATGTGAAAGTTCCCAGAGCAGGCACCTTTG...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
53% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR CAA 72 bp AGCTGCTTTCCTAGAGTGGTGAAACCTGCGTTCAGTTaGACATTTCTCCTCCATACGCAGCTGCCTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SCFPRVVKPAFS*TFLLHTQLPLA
Trigger: GGCCAGAGGCAGCTGCGTATGGAGGAGAAATGTCAAACTGAACGCAGGTTTCACCACTCTAGGAAAGCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCCTCTTCCCAGAGGTCTaGACCATCACGCCCTCTTTG +
Preference number: 4 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFILFPEV*TITPSL
Trigger: CAAAGAGGGCGTGATGGTTCAGACCTCTGGGAAGAG...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp TGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCTCTAACCACATCCAGCTGCCTTTGTTTGACTGACTaGGGAGCTCTGGAGGCCAGT +
Preference number: 4 (lower is better)
Translates to: CRKSNLPIQPIPLTTSSCLCLTD*GALEAS
Trigger: ACTGGCCTCCAGAGCTCCTCAGTCAGTCAAACAAAG...GCAGCTGGATGTGGTTAGAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCGACTGTGTGCTGCTCTaGACAGCAAAGGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: SSDFSGTLILICCLARRRDCVLL*TAKVAD
Trigger: ATCTGCCACCTTTGCTGTTCAGAGCAGCACACAGTC...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp ACTGGGTCACAGACATGCTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGGACACTGTTGTTGGTaGCTGTGTGCTGCTCTGAAC +
Preference number: 4 (lower is better)
Translates to: TGSQTCFTHVPLEPHALEGHCCW*LCAALN
Trigger: GTTCAGAGCAGCACACAGTCACCAACAACAGTGTCC...CTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGAGGACTTGCAGGAGTTaGCACATTTCTGCATCCTAT +
Preference number: 4 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWRTCRS*HISASY
Trigger: ATAGGATGCAGAAATGTGTCAACTCCTGCAAGTCCT...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCAAGTGGTCCATCTTGTTaGACTGAAAGTATCCCGACT +
Preference number: 4 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPSGPSC*TESIPT
Trigger: AGTCGGGATACTTTCAGTTCAACAAGATGGACCACT...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp ACTGTCCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTAGTGGTCCATCTTGTTaGACTGAAAGTATCCCGACT +
Preference number: 4 (lower is better)
Translates to: TVPSGCTISRNVKRDSPLSGPSC*TESIPT
Trigger: AGTCGGGATACTTTCAGTTCAACAAGATGGACCACT...AAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCAGGGGTTTCCACAGTTaGGACCACCAAGGCCAAATG +
Preference number: 4 (lower is better)
Translates to: SSDFSGTLILICCLARRRRGFHS*DHQGQM
Trigger: CATTTGGCCTTGGTGGTCTCAACTGTGGAAACCCCT...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp TGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCTCTAACCACATCCAGCTGCAGGGGTTTCCACAGTTaGGACCACCAAGGCCAAATG +
Preference number: 4 (lower is better)
Translates to: CRKSNLPIQPIPLTTSSCRGFHS*DHQGQM
Trigger: CATTTGGCCTTGGTGGTCTCAACTGTGGAAACCCCT...GCAGCTGGATGTGGTTAGAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CAGCCTGTGGTTCCACATCCACCTGTCTCCTCCACTGTGGTCACGCCCCGCATGCAACCTAGAAACATATaGAAACACTGTCCGTTCAAT +
Preference number: 4 (lower is better)
Translates to: QPVVPHPPVSSTVVTPRMQPRNI*KHCPFN
Trigger: ATTGAACGGACAGTGTTTTCATATGTTTCTAGGTTG...CATGCGGGGCGTGACCACAGTGGAGGAGACAGGTGGATGTGGAACCACAGGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GAAACCCATGAACAAGAAGCATTGTTGGAACTCACAGGACACCGTTTTCTCGATCCCTGCTGCAGTGTGTaGCGGGACACACAGATGCCC +
Preference number: 4 (lower is better)
Translates to: ETHEQEALLELTGHRFLDPCCSV*RDTQMP
Trigger: GGGCATCTGTGTGTCCCGTCACACACTGCAGCAGGG...ATCGAGAAAACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGTTCATGGGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACATGGATGTGTATGTCTaGCTGCACTTGTCAGAAACC +
Preference number: 4 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHMDVYV*LHLSET
Trigger: GGTTTCTGACAAGTGCAGTCAGACATACACATCCAT...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCTTGAAAATGCCCAGGTaGCAGACCCAGTCTCGGACC +
Preference number: 4 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSLKMPR*QTQSRT
Trigger: GGTCCGAGACTGGGTCTGTCACCTGGGCATTTTCAA...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GTCCGGGGAAAATGCAAGAATGCCGTGATCCTGGCAGTCCAGTGTAGGCCGGGTACAGCAATCCTCAAGTaGCCAGTTGGATCTCAAAAA +
Preference number: 4 (lower is better)
Translates to: VRGKCKNAVILAVQCRPGTAILK*PVGSQK
Trigger: TTTTTGAGATCCAACTGGTCACTTGAGGATTGCTGT...ACCCGGCCTACACTGGACTGCCAGGATCACGGCATTCTTGCATTTTCCCCGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482699.1
CDS-3UTR GCA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTGCTTCCTGTCACATCTaGAGATGTTGTGCTGTTGGT +
Preference number: 4 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETASCHI*RCCAVG
Trigger: ACCAACAGCACAACATCTGCAGATGTGACAGGAAGC...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGATTGGTGACTGTGTGCTaGTCTGAACAGCAAAGGTGG +
Preference number: 4 (lower is better)
Translates to: PKETDSRALGWLKGQRKRLVTVC*SEQQRW
Trigger: CCACCTTTGCTGTTCAGAGCAGCACACAGTCACCAA...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp ACTGTCCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTGAGTTGACACATTTCTaGATCCTATCAGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: TVPSGCTISRNVKRDSPLELTHF*ILSARS
Trigger: TGACCTGGCTGATAGGATGCAGAAATGTGTCAACTC...AAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGGACAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGAATGAATCACCAAATTaGTGCCTATGGAAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGNESPN*CLWKCL
Trigger: GAGACACTTCCATAGGCAGCAATTTGGTGATTCATT...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp TGTCTGGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTACTCTTTCCAAAGAAGTaGTGTAGTCTCAAAATTTGT +
Preference number: 4 (lower is better)
Translates to: CLGGEPRRARCASRPLLLLFPKK*CSLKIC
Trigger: ACAAATTTTGAGACTACAGCACTTCTTTGGAAAGAG...TAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCATCTCAGTCTGAGACATaGGACTTCCATTTTGCACCT +
Preference number: 4 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPSQSET*DFHFAP
Trigger: AGGTGCAAAATGGAAGTCCCATGTCTCAGACTGAGA...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGATGTAGGACGGAAGGTTaGATGTATGCAGAACTGGCG +
Preference number: 4 (lower is better)
Translates to: PKETDSRALGWLKGQRKRCRTEG*MYAELA
Trigger: CGCCAGTTCTGCATACATCCAACCTTCCGTCCTACA...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp AGCCTTGCCCAGAGCCTGGTCATGGTAGGAGCATGTCAGTTCATCCGCCTAAAGTCTGAACAGCAAAGGTaGCAGATTTGGGAGCCAAGT +
Preference number: 4 (lower is better)
Translates to: SLAQSLVMVGACQFIRLKSEQQR*QIWEPS
Trigger: ACTTGGCTCCCAAATCTGCCACCTTTGCTGTTCAGA...CTTTAGGCGGATGAACTGACATGCTCCTACCATGACCAGGCTCTGGGCAAGGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTCAAATAGCGTCACATTaGAGGCCAGGGAAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETQIASH*RPGKRL
Trigger: CAACCTTTTCCCTGGCCTCCAATGTGACGCTATTTG...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GTCCGGGGAAAATGCAAGAATGCCGTGATCCTGGCAGTCCAGTGTAGGCCGGGTGCATACGGGGACATTTaGAAATCTCCACTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: VRGKCKNAVILAVQCRPGAYGDI*KSPLLK
Trigger: CTTCAAAAGTGGAGATTTCCAAATGTCCCCGTATGC...ACCCGGCCTACACTGGACTGCCAGGATCACGGCATTCTTGCATTTTCCCCGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000482699.1
CDS-3UTR CCA 90 bp CTGATGAAAGACGGGTTATACTGTCCGGGGAAAATGCAAGAATGCCGTGATCCTGAGGTCCCAGGTGACTaGCTCAGAGCAATGAGTCCC +
Preference number: 4 (lower is better)
Translates to: LMKDGLYCPGKMQECRDPEVPGD*LRAMSP
Trigger: GGGACTCATTGCTCTGAGCCAGTCACCTGGGACCTC...AGGATCACGGCATTCTTGCATTTTCCCCGGACAGTATAACCCGTCTTTCATCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482699.1
CDS-3UTR CCA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACATCTTCAGACTTCAGTaGTACGCTCATCCTCATCTG +
Preference number: 4 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHIFRLQ*YAHPHL
Trigger: CAGATGAGGATGAGCGTACCACTGAAGTCTGAAGAT...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCTACTGGATGTCTCCCTaGCAGGACCCACATCACAGG +
Preference number: 4 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFIYWMSP*QDPHHR
Trigger: CCTGTGATGTGGGTCCTGCCAGGGAGACATCCAGTA...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACGGCAATAAGACCCTCTaGAGCTTAAACCAAACCACT +
Preference number: 4 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHGNKTL*SLNQTT
Trigger: AGTGGTTTGGTTTAAGCTCCAGAGGGTCTTATTGCC...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGCAACCTAGAAACATATaGAAACACTGTCCGTTCAAT +
Preference number: 4 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGQPRNI*KHCPFN
Trigger: ATTGAACGGACAGTGTTTTCATATGTTTCTAGGTTG...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGACAGCTTTGAGTGGTTaGAAGTTTACATGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWTALSG*KFTWGL
Trigger: CAAACCCCATGTAAACTTTCAACCACTCAAAGCTGT...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GTTCCCCAGGTGGCAATTAAAGACACCGAGTACTGGATGTCTCCCTGGCAGGACATATTTAGAGGACCTTaGAGAAACAACCATGCCCGG +
Preference number: 4 (lower is better)
Translates to: VPQVAIKDTEYWMSPWQDIFRGP*RNNHAR
Trigger: CCGGGCATGGTTGTTTCTTCAAGGTCCTCTAAATAT...GTCCTGCCAGGGAGACATCCAGTACTCGGTGTCTTTAATTGCCACCTGGGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp ACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACACTGTGGAGACTGTGTaGCCTCAACCTTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: TKLLPMEVSRERKPSFWNTVETV*PQPCGC
Trigger: GCACCCACAAGGTTGAGGTCACACAGTCTCCACAGT...GTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGGCTATTTATCCTCTCTaGAGGTTTCTGTACCTGAGA +
Preference number: 4 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWAIYPL*RFLYLR
Trigger: TCTCAGGTACAGAAACCTTCAGAGAGGATAAATAGC...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp ACTGTCCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTTTGCTGCTACAGTACTaGATAATTAGTGGAGGTTGC +
Preference number: 4 (lower is better)
Translates to: TVPSGCTISRNVKRDSPLLLLQY*IISGGC
Trigger: GCAACCTCCACTAATTATTCAGTACTGTAGCAGCAA...AAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGGACAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp ACTGGGTCACAGACATGCTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGAGAGGAGAGGAAGCTaGTGTCCTGTAGAAATGCAG +
Preference number: 4 (lower is better)
Translates to: TGSQTCFTHVPLEPHALEERRGS*CPVEMQ
Trigger: CTGCATTTCTACAGGACAGCAGCTTCCTCTCCTCTC...CTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp ACTGGGTCACAGACATGCTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGTTTGCACCTCAGAGCTaGTGGCAAGCTGATGTTCTC +
Preference number: 4 (lower is better)
Translates to: TGSQTCFTHVPLEPHALEFAPQS*WQADVL
Trigger: GAGAACATCAGCTTGCCAGCAGCTCTGAGGTGCAAA...CTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACCAAATGGGCAACTCATaGAGGTTTCATTTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHQMGNS*RFHFQA
Trigger: GGCTTGAAAATGAAACCTGCATGAGTTGCCCATTTG...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGAAGGGGCTCAACAAGCTaGTTTCCTAGAGTGGTGAAA +
Preference number: 4 (lower is better)
Translates to: PKETDSRALGWLKGQRKRRGSTS*FPRVVK
Trigger: TTTCACCACTCTAGGAAAGCAGCTTGTTGAGCCCCT...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp ACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACCTAACCACATCCAGCTaGAGGGGCTCAACAAGCTGC +
Preference number: 4 (lower is better)
Translates to: TKLLPMEVSRERKPSFWNLTTSS*RGSTSC
Trigger: GCAGCTTGTTGAGCCCCTGCAGCTGGATGTGGTTAG...GTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCACTGTCCCCAGTGGCTaGACCATTTCCAGAAATGTG +
Preference number: 4 (lower is better)
Translates to: SSDFSGTLILICCLARRRTVPSG*TISRNV
Trigger: CACATTTCTGGAAATGGTGCAGCCACTGGGGACAGT...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCAACTCTCCAGTTAGGTaGGAGGCCGTGAGCCACAAA +
Preference number: 4 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFINSPVR*EAVSHK
Trigger: TTTGTGGCTCACGGCCTCGCACCTAACTGGAGAGTT...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCGAAGTGGTGGCCTCTTaGCTGTGCACAGTCCATTCT +
Preference number: 4 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSEVVAS*LCTVHS
Trigger: AGAATGGACTGTGCACAGCCAAGAGGCCACCACTTC...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGATTGTTACAGCTTTGGTaGACTCTGTGGGCAGAGACA +
Preference number: 4 (lower is better)
Translates to: PKETDSRALGWLKGQRKRLLQLW*TLWAET
Trigger: TGTCTCTGCCCACAGAGTCCACCAAAGCTGTAACAA...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCCCAAGTCTTCAGCCGTaGAAACAACTGTGGTTTGGG +
Preference number: 4 (lower is better)
Translates to: SSDFSGTLILICCLARRRPSLQP*KQLWFG
Trigger: CCCAAACCACAGTTGTTTCCACGGCTGAAGACTTGG...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp ACTGGGTCACAGACATGCTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGAGCGAGGATTTTTaGGGTATTCAGCATACGGGG +
Preference number: 4 (lower is better)
Translates to: TGSQTCFTHVPLEPHALEVSEDF*GIQHTG
Trigger: CCCCGTATGCTGAATACCCCAAAAATCCTCGCTCAC...CTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTAATAAACAGCTTTGAGTaGTTGAAAGTTTACATGGGG +
Preference number: 4 (lower is better)
Translates to: DGEGCARTVRQGATVGRVINSFE*LKVYMG
Trigger: CCCCATGTAAACTTTCAACCACTCAAAGCTGTTTAT...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CACCCCCAAACGCCTCCTGGAAACTGTGGAGACTGTGTGACCTCAACCTTGTGGTTCTCCCACACTGACTaGAAGTATAACCACGTTTCT +
Preference number: 4 (lower is better)
Translates to: HPQTPPGNCGDCVTSTLWFSHTD*KYNHVS
Trigger: AGAAACGTGGTTATACTTCCAGTCAGTGTGGGAGAA...CCACAAGGTTGAGGTCACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp ACTGTCCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAACAGGCAAAATGGTaGAGTTTGTTCTACTTGAAG +
Preference number: 4 (lower is better)
Translates to: TVPSGCTISRNVKRDSPLQQAKW*SLFYLK
Trigger: CTTCAAGTAGAACAAACTTCACCATTTTGCCTGTTG...AAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp ACTGTCCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTGTTCCACTCTTTGTTTaGAAAGCGGCAATTCTTTCA +
Preference number: 4 (lower is better)
Translates to: TVPSGCTISRNVKRDSPLVPLFV*KAAILS
Trigger: TGAAAGAATTGCCGCTTTTCAAACAAAGAGTGGAAC...AAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGGACAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp ACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGTGGAGACAATTCTGGAGAGATCTGGTCCTaGGGAATTTCTCTTCCTAGA +
Preference number: 4 (lower is better)
Translates to: TISRNVKRDSPLQGGDNSGEIWS*GISLPR
Trigger: TCTAGGAAGAGAAATTCCTCAGGACCAGATCTCTCC...AGAATTGTCTCCACCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp TGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCTCTAACCACATCCAGCTGCGACACAGTCTCAGTCTaGGACATGGGACTTCCATTT +
Preference number: 4 (lower is better)
Translates to: CRKSNLPIQPIPLTTSSCDTVSV*DMGLPF
Trigger: AAATGGAAGTCCCATGTCTCAGACTGAGACTGTGTC...GCAGCTGGATGTGGTTAGAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp AGCCTTGCCCAGAGCCTGGTCATGGTAGGAGCATGTCAGTTCATCCGCCTAAAGTTAAGGTCTGCAGTTTaGCTACTATGGAGCATTGTC +
Preference number: 4 (lower is better)
Translates to: SLAQSLVMVGACQFIRLKLRSAV*LLWSIV
Trigger: GACAATGCTCCATAGTAGTCAAACTGCAGACCTTAA...CTTTAGGCGGATGAACTGACATGCTCCTACCATGACCAGGCTCTGGGCAAGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCACGCATTCGCCATTGTaGAGACAAGGGTTCACAGCA +
Preference number: 4 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSTHSPL*RQGFTA
Trigger: TGCTGTGAACCCTTGTCTTCACAATGGCGAATGCGT...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GCTTTCATCACTGATGAAAGACGGGTTATACTGTCCGGGGAAAATGCAAGAATGAGCAGAGGTCCCAGGTaGCTGGCTCAGAGCAATGAG +
Preference number: 4 (lower is better)
Translates to: AFITDERRVILSGENARMSRGPR*LAQSNE
Trigger: CTCATTGCTCTGAGCCAGTCACCTGGGACCTCTGCT...CATTCTTGCATTTTCCCCGGACAGTATAACCCGTCTTTCATCAGTGATGAAAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482699.1
CDS-3UTR TCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGATTCCCAAAGCACTGTTaGTGCAGGAAATCTAACCTG +
Preference number: 4 (lower is better)
Translates to: PKETDSRALGWLKGQRKRFPKHC*CRKSNL
Trigger: CAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAA...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCAAGCTGTGACGTCAGCTaGAGGCAGTGGAAGTGTATG +
Preference number: 4 (lower is better)
Translates to: PHLLFSTQALGRKIINKPSCDVS*RQWKCM
Trigger: CATACACTTCCACTGCCTTCAGCTGACGTCACAGCT...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GGCCGGGTAGAGTCCGTTTCGTTCAAGTTCTGGATTCCTTACACTTGTAGGCTTGGGAAAATGCAAGAATaGCGTGATCCTGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: GRVESVSFKFWIPYTCRLGKMQE*RDPGSP
Trigger: TGGACTGCCAGGATCACGGCATTCTTGCATTTTCCC...AAGCCTACAAGTGTAAGGAATCCAGAACTTGAACGAAACGGACTCTACCCGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482699.1
CDS-3UTR GCA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCGCAGGAAATCTAACCTaGCTATTCAGCCCATCCCTC +
Preference number: 4 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSAGNLT*LFSPSL
Trigger: GAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGC...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCATTGAAGAAACAACCATaGCCGGGGCAGAACTGTCCC +
Preference number: 4 (lower is better)
Translates to: PHLLFSTQALGRKIINKPLKKQP*PGQNCP
Trigger: GGGACAGTTCTGCCCCGGGCATGGTTGTTTCTTCAA...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCGCTAAGTTGCCACTCTaGGAAGTCAGAGCTGTTGCT +
Preference number: 4 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFIAKLPL*EVRAVA
Trigger: AGCAACAGCTCTGACTTCCCAGAGTGGCAACTTAGC...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCGACTTTCTCTTGGTGTaGGGTGCTCTGGCTCTTAAG +
Preference number: 4 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSDFLLV*GALALK
Trigger: CTTAAGAGCCAGAGCACCCCACACCAAGAGAAAGTC...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp TGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCTCTAACCACATCCAGCTGCCCAGGTCAGTGCAGATaGAGGTGTCTTTGTCACATT +
Preference number: 4 (lower is better)
Translates to: CRKSNLPIQPIPLTTSSCPGQCR*RCLCHI
Trigger: AATGTGACAAAGACACCTCCATCTGCACTGACCTGG...GCAGCTGGATGTGGTTAGAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp ACTGGGTCACAGACATGCTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGCCAGGTCAGTGCAGATaGAGGTGTCTTTGTCACATT +
Preference number: 4 (lower is better)
Translates to: TGSQTCFTHVPLEPHALEPGQCR*RCLCHI
Trigger: AATGTGACAAAGACACCTCCATCTGCACTGACCTGG...CTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTGCATACGGGGACATTTaGAAATCTCCACTTTTGAAG +
Preference number: 4 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETAYGDI*KSPLLK
Trigger: CTTCAAAAGTGGAGATTTCCAAATGTCCCCGTATGC...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACAGGAAGCCTTCTTTCTaGAACAGTCTCAAAACAGAT +
Preference number: 4 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHRKPSF*NSLKTD
Trigger: ATCTGTTTTGAGACTGTTCCAGAAAGAAGGCTTCCT...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCCTCCCCGCTTCAGGGTaGAGACAATTCTTTTACCTC +
Preference number: 4 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFILPASG*RQFFYL
Trigger: GAGGTAAAAGAATTGTCTCCACCCTGAAGCGGGGAG...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp AGCCTTGCCCAGAGCCTGGTCATGGTAGGAGCATGTCAGTTCATCCGCCTAAAGCCGTTTTCTCGATGTTaGGATTCTTCCCAAGAATGT +
Preference number: 4 (lower is better)
Translates to: SLAQSLVMVGACQFIRLKPFSRC*DSSQEC
Trigger: ACATTCTTGGGAAGAATCCCAACATCGAGAAAACGG...CTTTAGGCGGATGAACTGACATGCTCCTACCATGACCAGGCTCTGGGCAAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp ACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACTTTCAGCGAGTAGAGTaGGGTTTTCTGGAGCATCCG +
Preference number: 4 (lower is better)
Translates to: TKLLPMEVSRERKPSFWNFQRVE*GFLEHP
Trigger: CGGATGCTCCAGAAAACCTCACTCTACTCGCTGAAA...GTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GAAACCCATGAACAAGAAGCATTGTTGGAACTCACAGGACACCGTTTTCTCGATCTAAAGATCCGCCTCTaGGATCCCAAGAGCTGGCAG +
Preference number: 4 (lower is better)
Translates to: ETHEQEALLELTGHRFLDLKIRL*DPKSWQ
Trigger: CTGCCAGCTCTTGGGATCTCAGAGGCGGATCTTTAG...ATCGAGAAAACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGTTCATGGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCTTTCTGAGGCTAAGTTaGCACTCTGGGAAGTCAGAG +
Preference number: 4 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSFLRLS*HSGKSE
Trigger: CTCTGACTTCCCAGAGTGGCAACTTAGCCTCAGAAA...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAACACAGGAGTCTCCCTTaGCCTGGGCAGGACAGGGGT +
Preference number: 4 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKHRSLP*PGQDRG
Trigger: ACCCCTGTCCTGCCCAGGGCAAGGGAGACTCCTGTG...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCAAGGGAAAAGGTTGTTTaGAGTGAGATCACCACCGCG +
Preference number: 4 (lower is better)
Translates to: PHLLFSTQALGRKIINKPREKVV*SEITTA
Trigger: CGCGGTGGTGATCTCACTGCAAACAACCTTTTCCCT...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GTTCCCCAGGTGGCAATTAAAGACACCGAGTACTGGATGTCTCCCTGGCAGGACAATGAATCACCAAATTaGTGCCTATGGAAGTGTCTC +
Preference number: 4 (lower is better)
Translates to: VPQVAIKDTEYWMSPWQDNESPN*CLWKCL
Trigger: GAGACACTTCCATAGGCAGCAATTTGGTGATTCATT...GTCCTGCCAGGGAGACATCCAGTACTCGGTGTCTTTAATTGCCACCTGGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp ACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACGCAGGAAATCTAACCTaGCTATTCAGCCCATCCCTC +
Preference number: 4 (lower is better)
Translates to: TKLLPMEVSRERKPSFWNAGNLT*LFSPSL
Trigger: GAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGC...GTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCGGACACAGGAGTTCTTaGTTAAAACCATCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSGHRSS*LKPSGP
Trigger: TGGCCCTGATGGTTTTAAGCAAGAACTCCTGTGTCC...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAAAACCCCGTGCAGGAGTaGAGCTGGCCTCTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKNPVQE*SWPLPS
Trigger: GGAAGGGAGAGGCCAGCTGCACTCCTGCACGGGGTT...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCCATCACGCCCTCTTTaGAGGACACTGTTGAAAAGT +
Preference number: 4 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSPSRPL*RTLLKS
Trigger: ACTTTTCAACAGTGTCCTCCAAAGAGGGCGTGATGG...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp ACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACCAATTCTGGAGTCCTTaGGGAAGCCTTCTGTCTTGC +
Preference number: 4 (lower is better)
Translates to: TKLLPMEVSRERKPSFWNQFWSP*GSLLSC
Trigger: GCAAGACAGAAGGCTTCCCCAAGGACTCCAGAATTG...GTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp GAAACCCATGAACAAGAAGCATTGTTGGAACTCACAGGACACCGTTTTCTCGATAGTGGTAGCCACGGCTaGTGTTGTCTGCGACGCATT +
Preference number: 4 (lower is better)
Translates to: ETHEQEALLELTGHRFLDSGSHG*CCLRRI
Trigger: AATGCGTCGCAGACAACACCAGCCGTGGCTACCACT...ATCGAGAAAACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGTTCATGGGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp TCCTACGACCATCTAGTTGCAGGTGGAGTTAGGACCCCAAACCAGGAGGCCAACGTTTCGTTCAAGTTCTaGATTCCTTACACTTGTAGG +
Preference number: 4 (lower is better)
Translates to: SYDHLVAGGVRTPNQEANVSFKF*IPYTCR
Trigger: CCTACAAGTGTAAGGAATCCAGAACTTGAACGAAAC...GTTGGCCTCCTGGTTTGGGGTCCTAACTCCACCTGCAACTAGATGGTCGTAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482699.1
CDS-3UTR CCA 90 bp TTAAAAGTAGTCTCTTCTTCTGCTTTCATCACTGATGAAAGACGGGTTATACTGGCTCCCGACAAATCCTaGGCGCAGCCTCCTGGTGCG +
Preference number: 4 (lower is better)
Translates to: LKVVSSSAFITDERRVILAPDKS*AQPPGA
Trigger: CGCACCAGGAGGCTGCGCCCAGGATTTGTCGGGAGC...CAGTATAACCCGTCTTTCATCAGTGATGAAAGCAGAAGAAGAGACTACTTTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000482699.1
CDS-3UTR CCA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCGTGGACATGAGATTCTaGGTACAAAGTGCTGCAGTA +
Preference number: 4 (lower is better)
Translates to: SSDFSGTLILICCLARRRVDMRF*VQSAAV
Trigger: TACTGCAGCACTTTGTACCCAGAATCTCATGTCCAC...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCACACAGTTCCCCAGGTaGCAATTAAAGACACCGAGT +
Preference number: 4 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFITQFPR*QLKTPS
Trigger: ACTCGGTGTCTTTAATTGCCACCTGGGGAACTGTGT...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp ACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACACCTTCCCCCATCTGTaGGATATTGGTGCAGGATTG +
Preference number: 4 (lower is better)
Translates to: TKLLPMEVSRERKPSFWNTFPHL*DIGAGL
Trigger: CAATCCTGCACCAATATCCCACAGATGGGGGAAGGT...GTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCGGCAATAAGACCCTCTaGAGCTTAAACCAAACCACT +
Preference number: 4 (lower is better)
Translates to: SSDFSGTLILICCLARRRGNKTL*SLNQTT
Trigger: AGTGGTTTGGTTTAAGCTCCAGAGGGTCTTATTGCC...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp ACTGGGTCACAGACATGCTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGATTCTGATAGAAGGTaGTGTTTTCTACATGGGCCT +
Preference number: 4 (lower is better)
Translates to: TGSQTCFTHVPLEPHALEDSDRR*CFLHGP
Trigger: AGGCCCATGTAGAAAACATCACCTTCTATCAGAATC...CTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCTCACATCTTAGTTTTTaGCCTCAGATGCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSSHLSF*PQMPSA
Trigger: GGCTGATGGCATCTGAGGTCAAAAACTAAGATGTGA...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTATACAGAAAGGTAAATaGTTCGGATTAGTTTCCCAG +
Preference number: 4 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETIQKGK*FGLVSQ
Trigger: CTGGGAAACTAATCCGAATCATTTACCTTTCTGTAT...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp TGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCTCTAACCACATCCAGCTGCGTTGGGGAATCATTTTaGCAACGCAAAGACGTAAGT +
Preference number: 4 (lower is better)
Translates to: CRKSNLPIQPIPLTTSSCVGESF*QRKDVS
Trigger: ACTTACGTCTTTGCGTTGGCAAAATGATTCCCCAAC...GCAGCTGGATGTGGTTAGAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp TGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCTCTAACCACATCCAGCTGCCAAATGGGCAACTCATaGAGGTTTCATTTTCAAGCC +
Preference number: 4 (lower is better)
Translates to: CRKSNLPIQPIPLTTSSCQMGNS*RFHFQA
Trigger: GGCTTGAAAATGAAACCTGCATGAGTTGCCCATTTG...GCAGCTGGATGTGGTTAGAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAATATCCCGACTTGCACTaGCACAGGGCAACGCCGTCC +
Preference number: 4 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKYPDLH*HRATPS
Trigger: GGACGGCGTTGCCCTGTGCCAGTGCAAGTCGGGATA...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGAGTTTCGTTCAAGTTCTaGATTCCTTACACTTGTAGG +
Preference number: 4 (lower is better)
Translates to: PKETDSRALGWLKGQRKRVSFKF*IPYTCR
Trigger: CCTACAAGTGTAAGGAATCCAGAACTTGAACGAAAC...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCTTCTCCCACACTGACTaGAAGTATAACCACGTTTCT +
Preference number: 4 (lower is better)
Translates to: SSDFSGTLILICCLARRRFSHTD*KYNHVS
Trigger: AGAAACGTGGTTATACTTCCAGTCAGTGTGGGAGAA...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCAACACAGTTCCCCAGGTaGCAATTAAAGACACCGAGT +
Preference number: 4 (lower is better)
Translates to: PHLLFSTQALGRKIINKPTQFPR*QLKTPS
Trigger: ACTCGGTGTCTTTAATTGCCACCTGGGGAACTGTGT...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp ACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGTGGAGACAATTCTCCGTTTTCTCGATGTTaGGATTCTTCCCAAGAATGT +
Preference number: 4 (lower is better)
Translates to: TISRNVKRDSPLQGGDNSPFSRC*DSSQEC
Trigger: ACATTCTTGGGAAGAATCCCAACATCGAGAAAACGG...AGAATTGTCTCCACCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp ACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACCCATCTGTGGGATATTaGTGCAGGATTGTGGCATCT +
Preference number: 4 (lower is better)
Translates to: TKLLPMEVSRERKPSFWNPSVGY*CRIVAS
Trigger: AGATGCCACAATCCTGCACCAATATCCCACAGATGG...GTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCATGTTGCTATCTCCAGTaGGTACCCAACAGGCAAAAT +
Preference number: 4 (lower is better)
Translates to: PHLLFSTQALGRKIINKPCCYLQ*VPNRQN
Trigger: ATTTTGCCTGTTGGGTACTCACTGGAGATAGCAACA...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAATCGGGCCACCATCAGTaGACACGGTGGCAACATGCA +
Preference number: 4 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKSGHHQ*TRWQHA
Trigger: TGCATGTTGCCACCGTGTTCACTGATGGTGGCCCGA...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCGTCATTGTTGATGTCTaGAATGAAGTCACAGGAGTC +
Preference number: 4 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFIVIVDV*NEVTGV
Trigger: GACTCCTGTGACTTCATTTCAGACATCAACAATGAC...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp GCTTTCATCACTGATGAAAGACGGGTTATACTGTCCGGGGAAAATGCAAGAATGAATGCAAGAATGCCGTaGTCCTGGCAGTCCAGTGTA +
Preference number: 4 (lower is better)
Translates to: AFITDERRVILSGENARMNARMP*SWQSSV
Trigger: TACACTGGACTGCCAGGATCACGGCATTCTTGCATT...CATTCTTGCATTTTCCCCGGACAGTATAACCCGTCTTTCATCAGTGATGAAAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482699.1
CDS-3UTR TCA 90 bp ACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACTTCCCAAAGCACTGTTaGTGCAGGAAATCTAACCTG +
Preference number: 4 (lower is better)
Translates to: TKLLPMEVSRERKPSFWNFPKHC*CRKSNL
Trigger: CAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAA...GTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp TGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCTCTAACCACATCCAGCTGCAAAAAGGCGACACTTTaGAATTTTAGGTTAGCCTCC +
Preference number: 4 (lower is better)
Translates to: CRKSNLPIQPIPLTTSSCKKATL*NFRLAS
Trigger: GGAGGCTAACCTAAAATTTCAAAGTGTCGCCTTTTT...GCAGCTGGATGTGGTTAGAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GAAACCCATGAACAAGAAGCATTGTTGGAACTCACAGGACACCGTTTTCTCGATATGATTTGTCAGCTGTaGCGTCAGCTGAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: ETHEQEALLELTGHRFLDMICQL*RQLKAV
Trigger: CACTGCCTTCAGCTGACGTCACAGCTGACAAATCAT...ATCGAGAAAACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGTTCATGGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCGGTTTAAGCATCTCTTaGGCAGTTACACATCACTTG +
Preference number: 4 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSGLSIS*AVTHHL
Trigger: CAAGTGATGTGTAACTGCTCAAGAGATGCTTAAACC...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAATCCAAGCCGAAGTGGTaGCCTCTTGGCTGTGCACAG +
Preference number: 4 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKSKPKW*PLGCAQ
Trigger: CTGTGCACAGCCAAGAGGCCACCACTTCGGCTTGGA...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCAGAATTCCTCATCCCCTaGATTCCCAGTTACTCTACT +
Preference number: 4 (lower is better)
Translates to: PHLLFSTQALGRKIINKPEFLIP*IPSYST
Trigger: AGTAGAGTAACTGGGAATCCAGGGGATGAGGAATTC...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
3UTR CAA 72 bp ATCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTaGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATT +
Preference number: 4 (lower is better)
Translates to: IFRLQWYAHPHL*FSTQALGRKII
Trigger: AATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp ACTGGGTCACAGACATGCTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGTATGGAGCATTGTCATaGATGATGTCATTGTTGATG +
Preference number: 4 (lower is better)
Translates to: TGSQTCFTHVPLEPHALEYGALS*MMSLLM
Trigger: CATCAACAATGACATCATTCATGACAATGCTCCATA...CTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCAACAGCTTTGAGTGGTTaGAAGTTTACATGGGGTTTG +
Preference number: 4 (lower is better)
Translates to: PHLLFSTQALGRKIINKPTALSG*KFTWGL
Trigger: CAAACCCCATGTAAACTTTCAACCACTCAAAGCTGT...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCATACGGAAGAAACCCATaGACAAGAAGCATTGTTGGA +
Preference number: 4 (lower is better)
Translates to: PHLLFSTQALGRKIINKPYGRNP*TRSIVG
Trigger: TCCAACAATGCTTCTTGTTCATGGGTTTCTTCCGTA...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAAACTGTGGAGACTGTGTaGCCTCAACCTTGTGGGTGC +
Preference number: 4 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKTVETV*PQPCGC
Trigger: GCACCCACAAGGTTGAGGTCACACAGTCTCCACAGT...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCTCTCTTGCCCTCTTTaGTATTTAAGGTATACAGGA +
Preference number: 4 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSLSCPL*YLRYTG
Trigger: TCCTGTATACCTTAAATATCAAAGAGGGCAAGAGAG...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp GAAACCCATGAACAAGAAGCATTGTTGGAACTCACAGGACACCGTTTTCTCGATACTCCTATCTCCCAATaGTGTGTGACTTCCTCCAGA +
Preference number: 4 (lower is better)
Translates to: ETHEQEALLELTGHRFLDTPISQ*CVTSSR
Trigger: TCTGGAGGAAGTCACACAGCATTGGGAGATAGGAGT...ATCGAGAAAACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGTTCATGGGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAAGTGCCAGTGCCATGGTaGAGTCACTCAGAGAGACTC +
Preference number: 4 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKVPVPW*SHSERL
Trigger: GAGTCTCTCTGAGTGACTGCACCATGGCACTGGCAC...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCAGATGAAAATAAATGGTaGGATTGTGACACAGAGGGC +
Preference number: 4 (lower is better)
Translates to: PHLLFSTQALGRKIINKPDENKW*DCDTEG
Trigger: GCCCTCTGTGTCACAATCCCACCATTTATTTTCATC...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCAACTAGTATTTCAGGATaGGTCAGCGAGAGCTGTTTT +
Preference number: 4 (lower is better)
Translates to: PHLLFSTQALGRKIINKPTSISG*VSESCF
Trigger: AAAACAGCTCTCGCTGACCCATCCTGAAATACTAGT...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCAGGAAGCCTTCTTTCTaGAACAGTCTCAAAACAGAT +
Preference number: 4 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFIRKPSF*NSLKTD
Trigger: ATCTGTTTTGAGACTGTTCCAGAAAGAAGGCTTCCT...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAAAATAGCCTCCCTACATaGCTCTTCCCACAGCTGCGG +
Preference number: 4 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKNSLPT*LFPQLR
Trigger: CCGCAGCTGTGGGAAGAGCCATGTAGGGAGGCTATT...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAACCCCCAAACGCCTCCTaGAAACTGTGGAGACTGTGT +
Preference number: 4 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKPPNAS*KLWRLC
Trigger: ACACAGTCTCCACAGTTTCCAGGAGGCGTTTGGGGG...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GAAACCCATGAACAAGAAGCATTGTTGGAACTCACAGGACACCGTTTTCTCGATTCAATGGCATATTCTTaGGTAGCCATCCAGCCTAGG +
Preference number: 4 (lower is better)
Translates to: ETHEQEALLELTGHRFLDSMAYS*VAIQPR
Trigger: CCTAGGCTGGATGGCTACCCAAGAATATGCCATTGA...ATCGAGAAAACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGTTCATGGGTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAAAAAAGCCACACGTGGTaGGTGACCCAAAGGTGCCTG +
Preference number: 4 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKKSHTW*VTQRCL
Trigger: CAGGCACCTTTGGGTCACCCACCACGTGTGGCTTTT...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp ACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACGTATTTTGCTGCAAATaGATCACCAAATTGCTGCCT +
Preference number: 4 (lower is better)
Translates to: TKLLPMEVSRERKPSFWNVFCCK*ITKLLP
Trigger: AGGCAGCAATTTGGTGATTCATTTGCAGCAAAATAC...GTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp ACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACCTCTCTTGCCCTCTTTaGTATTTAAGGTATACAGGA +
Preference number: 4 (lower is better)
Translates to: TKLLPMEVSRERKPSFWNLSCPL*YLRYTG
Trigger: TCCTGTATACCTTAAATATCAAAGAGGGCAAGAGAG...GTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCACCCAATTTACTAAAGTaGAAACGAAGGGAAAACCAG +
Preference number: 4 (lower is better)
Translates to: PHLLFSTQALGRKIINKPPNLLK*KRRENQ
Trigger: CTGGTTTTCCCTTCGTTTGCACTTTAGTAAATTGGG...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAAGAGTATTGTTGCACATaGCTGTGGATGGGCAGGGGT +
Preference number: 4 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKEYCCT*LWMGRG
Trigger: ACCCCTGCCCATCCACAGCCATGTGCAACAATACTC...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAACCTCACTGTGGGGGCTaGCTTGGAAACTGTAGCATA +
Preference number: 4 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKPHCGG*LGNCSI
Trigger: TATGCTACAGTTTCCAAGCCAGCCCCCACAGTGAGG...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAAAAAGACACCGAGTACTaGATGTCTCCCTGGCAGGAC +
Preference number: 4 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKKDTEY*MSPWQD
Trigger: GTCCTGCCAGGGAGACATCCAGTACTCGGTGTCTTT...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCACTTTTTAGACCTGAATaGTCCCCCTTTGGTTTCATA +
Preference number: 4 (lower is better)
Translates to: PHLLFSTQALGRKIINKPLFRPE*SPFGFI
Trigger: TATGAAACCAAAGGGGGACCATTCAGGTCTAAAAAG...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAATCAGAGAGACTCTCTTaGTACTGGCCCACATTCACG +
Preference number: 4 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKSERLS*YWPTFT
Trigger: CGTGAATGTGGGCCAGTATCAAGAGAGTCTCTCTGA...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR TCA 90 bp CCTCATCTGTTGTTTAGCACGCAGGCGCTGGGCAGGAAAATAATTAACAAGCCAAGTTTACACCAGATATaGTGGAGTATAACGCTAATG +
Preference number: 4 (lower is better)
Translates to: PHLLFSTQALGRKIINKPSLHQI*WSITLM
Trigger: CATTAGCGTTATACTCCATCATATCTGGTGTAAACT...TGGCTTGTTAATTATTTTCCTGCCCAGCGCCTGCGTGCTAAACAACAGATGAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAAGGGAAAATGCAAGAATaGCGTGATCCTGGCAGTCCA +
Preference number: 4 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKGKMQE*RDPGSP
Trigger: TGGACTGCCAGGATCACGGCATTCTTGCATTTTCCC...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp GCTTTCATCACTGATGAAAGACGGGTTATACTGTCCGGGGAAAATGCAAGAATGTCTGGAGGAGGTTTTTaGTACTTCCATTCTCATGCA +
Preference number: 4 (lower is better)
Translates to: AFITDERRVILSGENARMSGGGF*YFHSHA
Trigger: TGCATGAGAATGGAAGTACCAAAAACCTCCTCCAGA...CATTCTTGCATTTTCCCCGGACAGTATAACCCGTCTTTCATCAGTGATGAAAGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000482699.1
CDS-3UTR CCA 90 bp TGGATTCCTTACACTTGTAGGCTTTATAAGGTCCTACGACCATCTAGTTGCAGGTACACATCCGTCATCTaGAGGAGGTTTTTGGTACTT +
Preference number: 4 (lower is better)
Translates to: WIPYTCRLYKVLRPSSCRYTSVI*RRFLVL
Trigger: AAGTACCAAAAACCTCCTCCAGATGACGGATGTGTA...CCTGCAACTAGATGGTCGTAGGACCTTATAAAGCCTACAAGTGTAAGGAATCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000482699.1
CDS-3UTR CCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAATATGCTTCCAGTATGTaGGAGCCATGGCCTTACCAC +
Preference number: 4 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKYASSM*EPWPYH
Trigger: GTGGTAAGGCCATGGCTCCCACATACTGGAAGCATA...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCTGTATTTTAGAACTATaGGTCAAAACCCTGTGTGTT +
Preference number: 4 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFICILEL*VKTLCV
Trigger: AACACACAGGGTTTTGACCCATAGTTCTAAAATACA...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp TATTTCTTCAGCCGAATAAACAGCTTTGAGTGGTTGAAAGTTTACATGGGGTTTATGATTTGTCAGCTGTaGCGTCAGCTGAAGGCAGTG +
Preference number: 4 (lower is better)
Translates to: YFFSRINSFEWLKVYMGFMICQL*RQLKAV
Trigger: CACTGCCTTCAGCTGACGTCACAGCTGACAAATCAT...AAACCCCATGTAAACTTTCAACCACTCAAAGCTGTTTATTCGGCTGAAGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp TATTTCTTCAGCCGAATAAACAGCTTTGAGTGGTTGAAAGTTTACATGGGGTTTCCGTGGAAACAACTGTaGTTTGGGGAGAAGGAGATG +
Preference number: 4 (lower is better)
Translates to: YFFSRINSFEWLKVYMGFPWKQL*FGEKEM
Trigger: CATCTCCTTCTCCCCAAACCACAGTTGTTTCCACGG...AAACCCCATGTAAACTTTCAACCACTCAAAGCTGTTTATTCGGCTGAAGAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR TCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAATCCATCTTGTTGAACTaGAAGTATCCCGACTTGCAC +
Preference number: 4 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKSILLN*KYPDLH
Trigger: GTGCAAGTCGGGATACTTTCAGTTCAACAAGATGGA...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp TATTTCTTCAGCCGAATAAACAGCTTTGAGTGGTTGAAAGTTTACATGGGGTTTTCTGTGGGATATTGGTaGAGGATTGTGGCATCTGTG +
Preference number: 4 (lower is better)
Translates to: YFFSRINSFEWLKVYMGFSVGYW*RIVASV
Trigger: CACAGATGCCACAATCCTGCACCAATATCCCACAGA...AAACCCCATGTAAACTTTCAACCACTCAAAGCTGTTTATTCGGCTGAAGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR GCA 90 bp TATTTCTTCAGCCGAATAAACAGCTTTGAGTGGTTGAAAGTTTACATGGGGTTTAGAAACCCAGGTCCTTaGCTTCCACTTCCTATACCA +
Preference number: 4 (lower is better)
Translates to: YFFSRINSFEWLKVYMGFRNPGP*LPLPIP
Trigger: TGGTATAGGAAGTGGAAGGCAAGGACCTGGGTTTCT...AAACCCCATGTAAACTTTCAACCACTCAAAGCTGTTTATTCGGCTGAAGAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CCA 90 bp GAAACCCATGAACAAGAAGCATTGTTGGAACTCACAGGACACCGTTTTCTCGATATTGATGAAAATAAATaGTGGGATTGTGACACAGAG +
Preference number: 4 (lower is better)
Translates to: ETHEQEALLELTGHRFLDIDENK*WDCDTE
Trigger: CTCTGTGTCACAATCCCACCATTTATTTTCATCAAT...ATCGAGAAAACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGTTCATGGGTTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR GCA 90 bp TATTTCTTCAGCCGAATAAACAGCTTTGAGTGGTTGAAAGTTTACATGGGGTTTCCCAATTTACTAAAGTaGAAACGAAGGGAAAACCAG +
Preference number: 4 (lower is better)
Translates to: YFFSRINSFEWLKVYMGFPNLLK*KRRENQ
Trigger: CTGGTTTTCCCTTCGTTTGCACTTTAGTAAATTGGG...AAACCCCATGTAAACTTTCAACCACTCAAAGCTGTTTATTCGGCTGAAGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CCA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAAATAAACAGCTTTGAGTaGTTGAAAGTTTACATGGGG +
Preference number: 4 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKINSFE*LKVYMG
Trigger: CCCCATGTAAACTTTCAACCACTCAAAGCTGTTTAT...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCACGAAGTGGTGGCCTCTaGGCTGTGCACAGTCCATTC +
Preference number: 5 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSRSGGL*AVHSPF
Trigger: GAATGGACTGTGCACAGCCAAGAGGCCACCACTTCG...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS GCA 90 bp GCCAGTGACCGTGAGACCAGGCCCATGTCGTCCGTCACGTTTACGTaGAGAGAGGCACCCTCTGTTTCTTGGTGCATGGCCGCTGCAGGG +
Preference number: 5 (lower is better)
Translates to: ASDRETRPMSSVTFT*REAPSVSWCMAAAG
Trigger: CCCTGCAGCGGCCATGCACCAAGAAACAGAGGGTGCCTCTCTGCACGTAAACGTGACGGACGACATGGGCCTGGTCTCACGGTCACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477536.1
ENST00000650592.1
CDS-3UTR CAA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGCATGGGACTTCCATTTaGCACCTCAGAGCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: GRRASACQVCIQASSAIRHGTSI*HLRAAG
Trigger: GCCAGCAGCTCTGAGGTGCAAAATGGAAGTCCCATG...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS GCA 90 bp AGAGGCACCCTCTGTTTCTTGGTGCATGGCCGCTGCAGGGCTGCCTaGTTCCCCAGAAGTCGTGCTCATGCTGGTGTTGGTGAGGGTGAC +
Preference number: 5 (lower is better)
Translates to: RGTLCFLVHGRCRAA*FPRSRAHAGVGEGD
Trigger: GTCACCCTCACCAACACCAGCATGAGCACGACTTCTGGGGAAGCAGGCAGCCCTGCAGCGGCCATGCACCAAGAAACAGAGGGTGCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477536.1
ENST00000650592.1
CDS CCA 90 bp TGTGGGTGCCGAGAGAGGGCACCCCAGAAGTCCTGTCCTCTGCATTaGCGGAACTGTCACCTAGTGCTTGGCCTGGCTCTCGGCTGTCTT +
Preference number: 5 (lower is better)
Translates to: CGCRERAPQKSCPLH*RNCHLVLGLALGCL
Trigger: AAGACAGCCGAGAGCCAGGCCAAGCACTAGGTGACAGTTCCGCCAATGCAGAGGACAGGACTTCTGGGGTGCCCTCTCTCGGCACCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477536.1
ENST00000650592.1
CDS CCA 90 bp GACCGCAGTGTGCGTTCCCCGTTTCCAGTGACAGTAGCCAAGGTGTaGGTGCCGAGAGAGGGCACCCCAGAAGTCCTGTCCTCTGCATTG +
Preference number: 5 (lower is better)
Translates to: DRSVRSPFPVTVAKV*VPREGTPEVLSSAL
Trigger: CAATGCAGAGGACAGGACTTCTGGGGTGCCCTCTCTCGGCACCCACACCTTGGCTACTGTCACTGGAAACGGGGAACGCACACTGCGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477536.1
ENST00000650592.1
CDS-3UTR CAA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCAGGCCAGGGAAAAGGTaGTTTGCAGTGAGATCACCA +
Preference number: 5 (lower is better)
Translates to: SPRPRRDPSAARNPVQECRPGKR*FAVRSP
Trigger: TGGTGATCTCACTGCAAACAACCTTTTCCCTGGCCT...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCCAGATGGAGGTGTCTTaGTCACATTCGGGACTCTTC +
Preference number: 5 (lower is better)
Translates to: SPRPRRDPSAARNPVQECQMEVS*SHSGLF
Trigger: GAAGAGTCCCGAATGTGACAAAGACACCTCCATCTG...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp CTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGGTGCCTTCCCCACCCCCTGTCCCTCTTCCTGCTaGCCACTCAGCGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: LYSCPLRASCSGGAFPTPCPSSC*PLSVAP
Trigger: GGGAGCCACGCTGAGTGGCAAGCAGGAAGAGGGACA...GGGGGTGGGGAAGGCACCTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGGCAGTTACACATCACTaGCCCCTTCCTCTCACCTTC +
Preference number: 5 (lower is better)
Translates to: GRRASACQVCIQASSAIRAVTHH*PLPLTF
Trigger: GAAGGTGAGAGGAAGGGGCAAGTGATGTGTAACTGC...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS TCA 90 bp CCAAGCCGAAGTGGTGGCCTCTTGGCTGTGCACAGTCCATTCTTCTaGCAGCCCCATCGCCCTCTCTGTTCCCATCTCCGAGGCTGTTCC +
Preference number: 5 (lower is better)
Translates to: PSRSGGLLAVHSPFF*QPHRPLCSHLRGCS
Trigger: GGAACAGCCTCGGAGATGGGAACAGAGAGGGCGATGGGGCTGTCAGAAGAATGGACTGTGCACAGCCAAGAGGCCACCACTTCGGCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS GCA 90 bp GGAAGAAAGGACGGGCTCCAAGCCGAAGTGGTGGCCTCTTGGCTGTaGACAGTCCATTCTTCTGACAGCCCCATCGCCCTCTCTGTTCCC +
Preference number: 5 (lower is better)
Translates to: GRKDGLQAEVVASWL*TVHSSDSPIALSVP
Trigger: GGGAACAGAGAGGGCGATGGGGCTGTCAGAAGAATGGACTGTGCACAGCCAAGAGGCCACCACTTCGGCTTGGAGCCCGTCCTTTCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS GCA 90 bp CCAGGAAGGCGGGCACCTGCAGTGGTAGCCACGGCTGGTGTTGTCTaGGACGCATTCGCCATTGTGAAGACAAGGGTTCACAGCACAGCT +
Preference number: 5 (lower is better)
Translates to: PGRRAPAVVATAGVV*DAFAIVKTRVHSTA
Trigger: AGCTGTGCTGTGAACCCTTGTCTTCACAATGGCGAATGCGTCGCAGACAACACCAGCCGTGGCTACCACTGCAGGTGCCCGCCTTCCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS GCA 90 bp TCACATCCACACTGCAATCATCCCCTTGCCAGGAAGGCGGGCACCTaGAGTGGTAGCCACGGCTGGTGTTGTCTGCGACGCATTCGCCAT +
Preference number: 5 (lower is better)
Translates to: SHPHCNHPLARKAGT*SGSHGWCCLRRIRH
Trigger: ATGGCGAATGCGTCGCAGACAACACCAGCCGTGGCTACCACTGCAGGTGCCCGCCTTCCTGGCAAGGGGATGATTGCAGTGTGGATGTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000488654.1
ENST00000650592.1
CDS CCA 90 bp CATCCCCTTGCCAGGAAGGCGGGCACCTGCAGTGGTAGCCACGGCTaGTGTTGTCTGCGACGCATTCGCCATTGTGAAGACAAGGGTTCA +
Preference number: 5 (lower is better)
Translates to: HPLARKAGTCSGSHG*CCLRRIRHCEDKGS
Trigger: TGAACCCTTGTCTTCACAATGGCGAATGCGTCGCAGACAACACCAGCCGTGGCTACCACTGCAGGTGCCCGCCTTCCTGGCAAGGGGATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000488654.1
ENST00000650592.1
CDS-3UTR CAA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCTCAAATAGCGTCACATaGGAGGCCAGGGAAAAGGTT +
Preference number: 5 (lower is better)
Translates to: SPRPRRDPSAARNPVQECSNSVT*EAREKV
Trigger: AACCTTTTCCCTGGCCTCCAATGTGACGCTATTTGA...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp GGGCGCAGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAAAAAACACATTGCAGTaGTGTGCGGTGCCTCACACA +
Preference number: 5 (lower is better)
Translates to: GRSLLVRSSEQRSQVTGSKNTLQ*CAVPHT
Trigger: TGTGTGAGGCACCGCACACAACTGCAATGTGTTTTT...TGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCTGCGCCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS GCA 90 bp GTTTACGTGCAGAGAGGCACCCTCTGTTTCTTGGTGCATGGCCGCTaGAGGGCTGCCTGCTTCCCCAGAAGTCGTGCTCATGCTGGTGTT +
Preference number: 5 (lower is better)
Translates to: VYVQRGTLCFLVHGR*RAACFPRSRAHAGV
Trigger: AACACCAGCATGAGCACGACTTCTGGGGAAGCAGGCAGCCCTGCAGCGGCCATGCACCAAGAAACAGAGGGTGCCTCTCTGCACGTAAAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477536.1
ENST00000650592.1
CDS CCA 90 bp CCGACTTGCACTGGCACAGGGCAACGCCGTCCAGGTCAGTGCAGATaGAGGTGTCTTTGTCACATTCGGGACTCTTCCGCTTGCACAAGC +
Preference number: 5 (lower is better)
Translates to: PTCTGTGQRRPGQCR*RCLCHIRDSSACTS
Trigger: GCTTGTGCAAGCGGAAGAGTCCCGAATGTGACAAAGACACCTCCATCTGCACTGACCTGGACGGCGTTGCCCTGTGCCAGTGCAAGTCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000487661.1
ENST00000650592.1
CDS-3UTR CAA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCAGGCTGTTCCACTCTTaGTTTGAAAAGCGGCAATTC +
Preference number: 5 (lower is better)
Translates to: SPRPRRDPSAARNPVQECRLFHS*FEKRQF
Trigger: GAATTGCCGCTTTTCAAACAAAGAGTGGAACAGCCT...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp TGTCTGGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCACATCTGCAGATGTaGTGCTGTTGGTCAAGAGCC +
Preference number: 5 (lower is better)
Translates to: CLGGEPRRARCASRPLLLSHLQM*CCWSRA
Trigger: GGCTCTTGACCAACAGCACAACATCTGCAGATGTGA...TAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS GCA 90 bp AGTATCCCGACTTGCACTGGCACAGGGCAACGCCGTCCAGGTCAGTaGAGATGGAGGTGTCTTTGTCACATTCGGGACTCTTCCGCTTGC +
Preference number: 5 (lower is better)
Translates to: SIPTCTGTGQRRPGQ*RWRCLCHIRDSSAC
Trigger: GCAAGCGGAAGAGTCCCGAATGTGACAAAGACACCTCCATCTGCACTGACCTGGACGGCGTTGCCCTGTGCCAGTGCAAGTCGGGATACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000487661.1
ENST00000650592.1
CDS CCA 90 bp AAAGCAGGAAGAAAGGACGGGCTCCAAGCCGAAGTGGTGGCCTCTTaGCTGTGCACAGTCCATTCTTCTGACAGCCCCATCGCCCTCTCT +
Preference number: 5 (lower is better)
Translates to: KAGRKDGLQAEVVAS*LCTVHSSDSPIALS
Trigger: AGAGAGGGCGATGGGGCTGTCAGAAGAATGGACTGTGCACAGCCAAGAGGCCACCACTTCGGCTTGGAGCCCGTCCTTTCTTCCTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CCA 90 bp CCATCTCCAAAGCAGGAAGAAAGGACGGGCTCCAAGCCGAAGTGGTaGCCTCTTGGCTGTGCACAGTCCATTCTTCTGACAGCCCCATCG +
Preference number: 5 (lower is better)
Translates to: PSPKQEERTGSKPKW*PLGCAQSILLTAPS
Trigger: CGATGGGGCTGTCAGAAGAATGGACTGTGCACAGCCAAGAGGCCACCACTTCGGCTTGGAGCCCGTCCTTTCTTCCTGCTTTGGAGATGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CCA 90 bp CTCCCATCTCCAAAGCAGGAAGAAAGGACGGGCTCCAAGCCGAAGTaGTGGCCTCTTGGCTGTGCACAGTCCATTCTTCTGACAGCCCCA +
Preference number: 5 (lower is better)
Translates to: LPSPKQEERTGSKPK*WPLGCAQSILLTAP
Trigger: TGGGGCTGTCAGAAGAATGGACTGTGCACAGCCAAGAGGCCACCACTTCGGCTTGGAGCCCGTCCTTTCTTCCTGCTTTGGAGATGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CCA 90 bp CCAGAAGTCCTGTCCTCTGCATTGGCGGAACTGTCACCTAGTGCTTaGCCTGGCTCTCGGCTGTCTTCCAAGGTCGAACGTTCTCCACGT +
Preference number: 5 (lower is better)
Translates to: PEVLSSALAELSPSA*PGSRLSSKVERSPR
Trigger: ACGTGGAGAACGTTCGACCTTGGAAGACAGCCGAGAGCCAGGCCAAGCACTAGGTGACAGTTCCGCCAATGCAGAGGACAGGACTTCTGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477536.1
ENST00000650592.1
CDS-3UTR CAA 90 bp TGTCTGGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATTTGTTGTTACAGCTTaGGTGGACTCTGTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: CLGGEPRRARCASRPLLLFVVTA*VDSVGR
Trigger: TCTGCCCACAGAGTCCACCAAAGCTGTAACAACAAA...TAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp TGTCTGGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTAGAGGACTTGCAGGAGTaGACACATTTCTGCATCCTA +
Preference number: 5 (lower is better)
Translates to: CLGGEPRRARCASRPLLLEDLQE*THFCIL
Trigger: TAGGATGCAGAAATGTGTCAACTCCTGCAAGTCCTC...TAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCCAGACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp CATCACTTGCCCCTTCCTCTCACCTTCCCCCATCTGTGGGATATTGGTGCAGGATCGGGACTCTTCCGCTaGCACAAGCTGCCCGCTCTA +
Preference number: 5 (lower is better)
Translates to: HHLPLPLTFPHLWDIGAGSGLFR*HKLPAL
Trigger: TAGAGCGGGCAGCTTGTGCAAGCGGAAGAGTCCCGA...TCCTGCACCAATATCCCACAGATGGGGGAAGGTGAGAGGAAGGGGCAAGTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp GGGCGGAGAGCCTCGGCGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGATCTGGAGGAGGTTTTaGGTACTTCCATTCTCATGC +
Preference number: 5 (lower is better)
Translates to: GRRASACQVCIQASSAIRIWRRF*VLPFSC
Trigger: GCATGAGAATGGAAGTACCAAAAACCTCCTCCAGAT...CCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACGCCGAGGCTCTCCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTGGGACACAGGAGTTCTaGCTTAAAACCATCAGGGCC +
Preference number: 5 (lower is better)
Translates to: RARCASRPLLLSGVSPRPGTQEF*LKTIRA
Trigger: GGCCCTGATGGTTTTAAGCAAGAACTCCTGTGTCCC...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTACCCATCTGTGGGATATaGGTGCAGGATTGTGGCATC +
Preference number: 5 (lower is better)
Translates to: DGEGCARTVRQGATVGRVPICGI*VQDCGI
Trigger: GATGCCACAATCCTGCACCAATATCCCACAGATGGG...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCTGTTCCACTCTTTGTTaGAAAAGCGGCAATTCTTTC +
Preference number: 5 (lower is better)
Translates to: SPRPRRDPSAARNPVQECCSTLC*KSGNSF
Trigger: GAAAGAATTGCCGCTTTTCAAACAAAGAGTGGAACA...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTGGGAAGCCTTCTGTCTaGCTCACAGGTCCCAGACTG +
Preference number: 5 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETGKPSV*LTGPRL
Trigger: CAGTCTGGGACCTGTGAGCAAGACAGAAGGCTTCCC...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCAGCAAAGGTGGCAGATTaGGGAGCCAAGTCTTCAGCC +
Preference number: 5 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPAKVAD*GAKSSA
Trigger: GGCTGAAGACTTGGCTCCCAAATCTGCCACCTTTGC...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp GATGGTGAGGGGTGTGCCAGGACAGTAAGGCAGGGGGCTACAGTGGGCAGAGTAAAGAGGACACTGTTGTaGGTGACTGTGTGCTGCTCT +
Preference number: 5 (lower is better)
Translates to: DGEGCARTVRQGATVGRVKRTLL*VTVCCS
Trigger: AGAGCAGCACACAGTCACCAACAACAGTGTCCTCTT...TACTCTGCCCACTGTAGCCCCCTGCCTTACTGTCCTGGCACACCCCTCACCATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGCAGATGGAGGTGTCTTaGTCACATTCGGGACTCTTC +
Preference number: 5 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGQMEVS*SHSGLF
Trigger: GAAGAGTCCCGAATGTGACAAAGACACCTCCATCTG...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp ACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGTGGAGACAATTCTTGTCCCTCTTCCTGCTaGCCACTCAGCGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: TISRNVKRDSPLQGGDNSCPSSC*PLSVAP
Trigger: GGGAGCCACGCTGAGTGGCAAGCAGGAAGAGGGACA...AGAATTGTCTCCACCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp TCCCCTCGGCCTAGGCGGGACCCTTCTGCAGCTAGGAACCCCGTGCAGGAGTGCAGGTTTAAGCATCTCTaGAGCAGTTACACATCACTT +
Preference number: 5 (lower is better)
Translates to: SPRPRRDPSAARNPVQECRFKHL*SSYTSL
Trigger: AAGTGATGTGTAACTGCTCAAGAGATGCTTAAACCT...GCACTCCTGCACGGGGTTCCTAGCTGCAGAAGGGTCCCGCCTAGGCCGAGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS CCA 90 bp CTGATAGAAGGTGATGTTTTCTACATGGGCCTCAGTGTTACTTTCTaGCCAATGTTTCCAGGCAGCATCCGCGCTCCCGCCTCTGGGGGC +
Preference number: 5 (lower is better)
Translates to: LIEGDVFYMGLSVTF*PMFPGSIRAPASGG
Trigger: GCCCCCAGAGGCGGGAGCGCGGATGCTGCCTGGAAACATTGGCCAGAAAGTAACACTGAGGCCCATGTAGAAAACATCACCTTCTATCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CCA 90 bp AGGTGGCAGATTTGGGAGCCAAGTCTTCAGCCGTGGAAACAACTGTaGTTTGGGGAGAAGGAGATGTTCCGAGGGAACGTGAAGCTGGGC +
Preference number: 5 (lower is better)
Translates to: RWQIWEPSLQPWKQL*FGEKEMFRGNVKLG
Trigger: GCCCAGCTTCACGTTCCCTCGGAACATCTCCTTCTCCCCAAACCACAGTTGTTTCCACGGCTGAAGACTTGGCTCCCAAATCTGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS-3UTR CAA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACCTGAAGAGGACACTGTaGTTGGTGACTGTGTGCTGC +
Preference number: 5 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHLKRTL*LVTVCC
Trigger: GCAGCACACAGTCACCAACAACAGTGTCCTCTTCAG...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp TGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCTCTAACCACATCCAGCTGCTCGGGACTCTTCCGCTaGCACAAGCTGCCCGCTCTA +
Preference number: 5 (lower is better)
Translates to: CRKSNLPIQPIPLTTSSCSGLFR*HKLPAL
Trigger: TAGAGCGGGCAGCTTGTGCAAGCGGAAGAGTCCCGA...GCAGCTGGATGTGGTTAGAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTGCTCATCCTCATCTGTaGTTTAGCACGCAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETAHPHL*FSTQAL
Trigger: CAGCGCCTGCGTGCTAAACAACAGATGAGGATGAGC...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp AGCCTTGCCCAGAGCCTGGTCATGGTAGGAGCATGTCAGTTCATCCGCCTAAAGGCTCATCCTCATCTGTaGTTTAGCACGCAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: SLAQSLVMVGACQFIRLKAHPHL*FSTQAL
Trigger: CAGCGCCTGCGTGCTAAACAACAGATGAGGATGAGC...CTTTAGGCGGATGAACTGACATGCTCCTACCATGACCAGGCTCTGGGCAAGGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp GTGTGGCTCCATCTCGGCTCCCTGTTCTTCCTCAGGAATCCACACAGCTTCCCACAGAAACCCAGGTCCTaGCCTTCCACTTCCTATACC +
Preference number: 5 (lower is better)
Translates to: VWLHLGSLFFLRNPHSFPQKPRS*PSTSYT
Trigger: GGTATAGGAAGTGGAAGGCAAGGACCTGGGTTTCTG...TGGGAAGCTGTGTGGATTCCTGAGGAAGAACAGGGAGCCGAGATGGAGCCACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS TCA 90 bp TCTCCACCTCTCATGGGTGCGACTGACCTAGACACAGTCTCAGTCTaGGACATGGGACTTCCATTTTGCACCTCAGAGCTGCTGGCAAGC +
Preference number: 5 (lower is better)
Translates to: SPPLMGATDLDTVSV*DMGLPFCTSELLAS
Trigger: GCTTGCCAGCAGCTCTGAGGTGCAAAATGGAAGTCCCATGTCTCAGACTGAGACTGTGTCTAGGTCAGTCGCACCCATGAGAGGTGGAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS TCA 90 bp TATCCATCTTCACATGCTCGGCAGGAGTGGTCCATCTTGTTGAACTaGAAGTATCCCGACTTGCACTGGCACAGGGCAACGCCGTCCAGG +
Preference number: 5 (lower is better)
Translates to: YPSSHARQEWSILLN*KYPDLHWHRATPSR
Trigger: CCTGGACGGCGTTGCCCTGTGCCAGTGCAAGTCGGGATACTTTCAGTTCAACAAGATGGACCACTCCTGCCGAGCATGTGAAGATGGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000487661.1
ENST00000650592.1
CDS CCA 90 bp CTGCAGAGGGTGAAAGAAGGACTGAGGATGAAGTCGTGGCAATTCTaGAGTCCTTGGGGAAGCCTTCTGTCTTGCTCACAGGTCCCAGAC +
Preference number: 5 (lower is better)
Translates to: LQRVKEGLRMKSWQF*SPWGSLLSCSQVPD
Trigger: GTCTGGGACCTGTGAGCAAGACAGAAGGCTTCCCCAAGGACTCCAGAATTGCCACGACTTCATCCTCAGTCCTTCTTTCACCCTCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CCA 90 bp GCAGATTTGGGAGCCAAGTCTTCAGCCGTGGAAACAACTGTGGTTTaGGGAGAAGGAGATGTTCCGAGGGAACGTGAAGCTGGGCTGTAC +
Preference number: 5 (lower is better)
Translates to: ADLGAKSSAVETTVV*GEGDVPREREAGLY
Trigger: GTACAGCCCAGCTTCACGTTCCCTCGGAACATCTCCTTCTCCCCAAACCACAGTTGTTTCCACGGCTGAAGACTTGGCTCCCAAATCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS-3UTR CAA 90 bp TGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCTCTAACCACATCCAGCTGCAGCTGTGCCACGCACTaGACCGTAGCTAATCCCAGC +
Preference number: 5 (lower is better)
Translates to: CRKSNLPIQPIPLTTSSCSCATH*TVANPS
Trigger: GCTGGGATTAGCTACGGTCAAGTGCGTGGCACAGCT...GCAGCTGGATGTGGTTAGAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGGCACAGAGGCCCTGGTaGATGGTAAAATTGATGAAA +
Preference number: 5 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGAQRPW*MVKLMK
Trigger: TTTCATCAATTTTACCATCAACCAGGGCCTCTGTGC...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp AGCCTTGCCCAGAGCCTGGTCATGGTAGGAGCATGTCAGTTCATCCGCCTAAAGGTGCTAAGTTGGTGCTaGTGGCTGGAAGGGTTTGCT +
Preference number: 5 (lower is better)
Translates to: SLAQSLVMVGACQFIRLKVLSWC*WLEGFA
Trigger: AGCAAACCCTTCCAGCCACAAGCACCAACTTAGCAC...CTTTAGGCGGATGAACTGACATGCTCCTACCATGACCAGGCTCTGGGCAAGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp AGCCTCCTGGTGCGGTCCTCTGAGCAGAGGTCCCAGGTGACTGGCTCAGAGCAAAGCATACGGGGACATTaGGAAATCTCCACTTTTGAA +
Preference number: 5 (lower is better)
Translates to: SLLVRSSEQRSQVTGSEQSIRGH*EISTFE
Trigger: TTCAAAAGTGGAGATTTCCAAATGTCCCCGTATGCT...TTGCTCTGAGCCAGTCACCTGGGACCTCTGCTCAGAGGACCGCACCAGGAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000482699.1
ENST00000487661.1
CDS-3UTR CAA 90 bp CGTGCCAGGTGTGCATCCAGGCCTCTTCTGCTATCAGGTGTTTCCCCTCGGCCTACCGTTTTCTCGATGTaGGGATTCTTCCCAAGAATG +
Preference number: 5 (lower is better)
Translates to: RARCASRPLLLSGVSPRPTVFSM*GFFPRM
Trigger: CATTCTTGGGAAGAATCCCAACATCGAGAAAACGGT...AGGCCGAGGGGAAACACCTGATAGCAGAAGAGGCCTGGATGCACACCTGGCACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS TCA 90 bp ACTGAGGCTGAAGAGGACACTGTTGTTGGTGACTGTGTGCTGCTCTaGACAGCAAAGGTGGCAGATTTGGGAGCCAAGTCTTCAGCCGTG +
Preference number: 5 (lower is better)
Translates to: TEAEEDTVVGDCVLL*TAKVADLGAKSSAV
Trigger: CACGGCTGAAGACTTGGCTCCCAAATCTGCCACCTTTGCTGTTCAGAGCAGCACACAGTCACCAACAACAGTGTCCTCTTCAGCCTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS TCA 90 bp GCCTATATCCATCTTCACATGCTCGGCAGGAGTGGTCCATCTTGTTaGACTGAAAGTATCCCGACTTGCACTGGCACAGGGCAACGCCGT +
Preference number: 5 (lower is better)
Translates to: AYIHLHMLGRSGPSC*TESIPTCTGTGQRR
Trigger: ACGGCGTTGCCCTGTGCCAGTGCAAGTCGGGATACTTTCAGTTCAACAAGATGGACCACTCCTGCCGAGCATGTGAAGATGGATATAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000487661.1
ENST00000650592.1
CDS GCA 90 bp AGCTGGCAGACCTCAGCAGAGGACTTGCAGGAGTTGACACATTTCTaGATCCTATCAGCCAGGTCAAATAGCGTCACATTGGAGGCCAGG +
Preference number: 5 (lower is better)
Translates to: SWQTSAEDLQELTHF*ILSARSNSVTLEAR
Trigger: CCTGGCCTCCAATGTGACGCTATTTGACCTGGCTGATAGGATGCAGAAATGTGTCAACTCCTGCAAGTCCTCTGCTGAGGTCTGCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000487661.1
ENST00000650592.1
CDS-3UTR CAA 90 bp GTTCCCCAGGTGGCAATTAAAGACACCGAGTACTGGATGTCTCCCTGGCAGGACTGTAATGACTTTCTCTaGGTGTGGGGTGCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: VPQVAIKDTEYWMSPWQDCNDFL*VWGALA
Trigger: AGCCAGAGCACCCCACACCAAGAGAAAGTCATTACA...GTCCTGCCAGGGAGACATCCAGTACTCGGTGTCTTTAATTGCCACCTGGGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp AGCCTTGCCCAGAGCCTGGTCATGGTAGGAGCATGTCAGTTCATCCGCCTAAAGGACATTTGTGCTAAGTaGGTGCTTGTGGCTGGAAGG +
Preference number: 5 (lower is better)
Translates to: SLAQSLVMVGACQFIRLKDICAK*VLVAGR
Trigger: CCTTCCAGCCACAAGCACCAACTTAGCACAAATGTC...CTTTAGGCGGATGAACTGACATGCTCCTACCATGACCAGGCTCTGGGCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTGGAAACAACTGTGGTTaGGGGAGAAGGAGATGTTCC +
Preference number: 5 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETGNNCG*GRRRCS
Trigger: GGAACATCTCCTTCTCCCCAAACCACAGTTGTTTCC...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp ACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACACTGCAATCATCCCCTaGCCAGGAAGGCGGGCACCT +
Preference number: 5 (lower is better)
Translates to: TKLLPMEVSRERKPSFWNTAIIP*PGRRAP
Trigger: AGGTGCCCGCCTTCCTGGCAAGGGGATGATTGCAGT...GTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACTCAAATAGCGTCACATaGGAGGCCAGGGAAAAGGTT +
Preference number: 5 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHSNSVT*EAREKV
Trigger: AACCTTTTCCCTGGCCTCCAATGTGACGCTATTTGA...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACGAGGACTTGCAGGAGTaGACACATTTCTGCATCCTA +
Preference number: 5 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHEDLQE*THFCIL
Trigger: TAGGATGCAGAAATGTGTCAACTCCTGCAAGTCCTC...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp AGCCTTGCCCAGAGCCTGGTCATGGTAGGAGCATGTCAGTTCATCCGCCTAAAGACCTCAGCAGAGGACTaGCAGGAGTTGACACATTTC +
Preference number: 5 (lower is better)
Translates to: SLAQSLVMVGACQFIRLKTSAED*QELTHF
Trigger: GAAATGTGTCAACTCCTGCAAGTCCTCTGCTGAGGT...CTTTAGGCGGATGAACTGACATGCTCCTACCATGACCAGGCTCTGGGCAAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp CATCACTTGCCCCTTCCTCTCACCTTCCCCCATCTGTGGGATATTGGTGCAGGAACCTCAGCAGAGGACTaGCAGGAGTTGACACATTTC +
Preference number: 5 (lower is better)
Translates to: HHLPLPLTFPHLWDIGAGTSAED*QELTHF
Trigger: GAAATGTGTCAACTCCTGCAAGTCCTCTGCTGAGGT...TCCTGCACCAATATCCCACAGATGGGGGAAGGTGAGAGGAAGGGGCAAGTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS TCA 90 bp AGGTTTTCTGGAGCATCCGAAGCAGCATGGCTCTTCCCAGAGGTCTaGACCATCACGCCCTCTTTGGAGGACACTGTTGAAAAGTCCTCT +
Preference number: 5 (lower is better)
Translates to: RFSGASEAAWLFPEV*TITPSLEDTVEKSS
Trigger: AGAGGACTTTTCAACAGTGTCCTCCAAAGAGGGCGTGATGGTTCAGACCTCTGGGAAGAGCCATGCTGCTTCGGATGCTCCAGAAAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS TCA 90 bp CAAGAGCCAGTGTGCAGTGATCTCTCCACCTCTCATGGGTGCGACTaGCCTAGACACAGTCTCAGTCTGAGACATGGGACTTCCATTTTG +
Preference number: 5 (lower is better)
Translates to: QEPVCSDLSTSHGCD*PRHSLSLRHGTSIL
Trigger: CAAAATGGAAGTCCCATGTCTCAGACTGAGACTGTGTCTAGGTCAGTCGCACCCATGAGAGGTGGAGAGATCACTGCACACTGGCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS TCA 90 bp GGAAACAACTGTGGTTTGGGGAGAAGGAGATGTTCCGAGGGAACGTaGAGCTGGGCTGTACTCTGCTGTAACGCCAAGCTTTGTGGTCAT +
Preference number: 5 (lower is better)
Translates to: GNNCGLGRRRCSEGT*SWAVLCCNAKLCGH
Trigger: ATGACCACAAAGCTTGGCGTTACAGCAGAGTACAGCCCAGCTTCACGTTCCCTCGGAACATCTCCTTCTCCCCAAACCACAGTTGTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS TCA 90 bp TTTTCCAACTGGTACCCAACCGGGCATTTGCAGATAAAGGATCCCTaGGTATTGTTGCACATGGCTGTGGATGGGCAGGGGTTCGACAGG +
Preference number: 5 (lower is better)
Translates to: FSNWYPTGHLQIKDP*VLLHMAVDGQGFDR
Trigger: CCTGTCGAACCCCTGCCCATCCACAGCCATGTGCAACAATACTCAGGGATCCTTTATCTGCAAATGCCCGGTTGGGTACCAGTTGGAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000488654.1
ENST00000650592.1
CDS CCA 90 bp TCGATTCCACTGCAGAGGGTGAAAGAAGGACTGAGGATGAAGTCGTaGCAATTCTGGAGTCCTTGGGGAAGCCTTCTGTCTTGCTCACAG +
Preference number: 5 (lower is better)
Translates to: SIPLQRVKEGLRMKS*QFWSPWGSLLSCSQ
Trigger: CTGTGAGCAAGACAGAAGGCTTCCCCAAGGACTCCAGAATTGCCACGACTTCATCCTCAGTCCTTCTTTCACCCTCTGCAGTGGAATCGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CCA 90 bp TCTGAACAGCAAAGGTGGCAGATTTGGGAGCCAAGTCTTCAGCCGTaGAAACAACTGTGGTTTGGGGAGAAGGAGATGTTCCGAGGGAAC +
Preference number: 5 (lower is better)
Translates to: SEQQRWQIWEPSLQP*KQLWFGEKEMFRGN
Trigger: GTTCCCTCGGAACATCTCCTTCTCCCCAAACCACAGTTGTTTCCACGGCTGAAGACTTGGCTCCCAAATCTGCCACCTTTGCTGTTCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS CCA 90 bp AGGACACTGTTGTTGGTGACTGTGTGCTGCTCTGAACAGCAAAGGTaGCAGATTTGGGAGCCAAGTCTTCAGCCGTGGAAACAACTGTGG +
Preference number: 5 (lower is better)
Translates to: RTLLLVTVCCSEQQR*QIWEPSLQPWKQLW
Trigger: CCACAGTTGTTTCCACGGCTGAAGACTTGGCTCCCAAATCTGCCACCTTTGCTGTTCAGAGCAGCACACAGTCACCAACAACAGTGTCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS-3UTR CAA 90 bp CCTAAAGAAACAGACTCCAGGGCCTTAGGCTGGCTCAAGGGGCAGAGGAAAAGAACCATCACGCCCTCTTaGGAGGACACTGTTGAAAAG +
Preference number: 5 (lower is better)
Translates to: PKETDSRALGWLKGQRKRTITPS*EDTVEK
Trigger: CTTTTCAACAGTGTCCTCCAAAGAGGGCGTGATGGT...TCTTTTCCTCTGCCCCTTGAGCCAGCCTAAGGCCCTGGAGTCTGTTTCTTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTTGGAGGCCAGTGGAGTaGTTAAGCTTCTCTGTACTT +
Preference number: 5 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETWRPVE*LSFSVL
Trigger: AAGTACAGAGAAGCTTAACAACTCCACTGGCCTCCA...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACGCAAAGGAGAGTTTGTaGTTACAGCTTTGGTGGACT +
Preference number: 5 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHAKESL*LQLWWT
Trigger: AGTCCACCAAAGCTGTAACAACAAACTCTCCTTTGC...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp CCCCAGTGGCTGCACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGAACAGCTTTGAGTGGTaGAAAGTTTACATGGGGTTT +
Preference number: 5 (lower is better)
Translates to: PQWLHHFQKCEAGLPASGNSFEW*KVYMGF
Trigger: AAACCCCATGTAAACTTTCAACCACTCAAAGCTGTT...CCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGTGCAGCCACTGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp ACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGTGGAGACAATTCTAGCCACAAAGGGCCATaGGTTCTACAGAGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: TISRNVKRDSPLQGGDNSSHKGP*VLQRER
Trigger: CCTCTCTCTCTGTAGAACCAATGGCCCTTTGTGGCT...AGAATTGTCTCCACCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCCCCATCTGTGGGATATaGGTGCAGGATTGTGGCATC +
Preference number: 5 (lower is better)
Translates to: SSDFSGTLILICCLARRRPICGI*VQDCGI
Trigger: GATGCCACAATCCTGCACCAATATCCCACAGATGGG...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp TGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCTCTAACCACATCCAGCTGCGCAGTTACACATCACTaGCCCCTTCCTCTCACCTTC +
Preference number: 5 (lower is better)
Translates to: CRKSNLPIQPIPLTTSSCAVTHH*PLPLTF
Trigger: GAAGGTGAGAGGAAGGGGCAAGTGATGTGTAACTGC...GCAGCTGGATGTGGTTAGAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS TCA 90 bp GAGATCCCAAGAGCTGGCAGACCTCAGCAGAGGACTTGCAGGAGTTaGCACATTTCTGCATCCTATCAGCCAGGTCAAATAGCGTCACAT +
Preference number: 5 (lower is better)
Translates to: EIPRAGRPQQRTCRS*HISASYQPGQIASH
Trigger: ATGTGACGCTATTTGACCTGGCTGATAGGATGCAGAAATGTGTCAACTCCTGCAAGTCCTCTGCTGAGGTCTGCCAGCTCTTGGGATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000487661.1
ENST00000650592.1
CDS CCA 90 bp TGGCAGTCCAGTGTAGGCCGGGTAGAGTCCGTTTCGTTCAAGTTCTaGATTCCTTACACTTGTAGGCGAGTAGTACACATCCGTCATCTG +
Preference number: 5 (lower is better)
Translates to: WQSSVGRVESVSFKF*IPYTCRRVVHIRHL
Trigger: CAGATGACGGATGTGTACTACTCGCCTACAAGTGTAAGGAATCCAGAACTTGAACGAAACGGACTCTACCCGGCCTACACTGGACTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000487661.1
ENST00000650592.1
CDS-3UTR CAA 90 bp ACTGGGTCACAGACATGCTTTACTCATGTCCCCTTAGAGCCTCATGCTCTGGAGAACGCCCGTTCTCCTTaGGTGAAAGTAGATGACAGG +
Preference number: 5 (lower is better)
Translates to: TGSQTCFTHVPLEPHALENARSP*VKVDDR
Trigger: CCTGTCATCTACTTTCACCAAAGGAGAACGGGCGTT...CTCCAGAGCATGAGGCTCTAAGGGGACATGAGTAAAGCATGTCTGTGACCCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp ACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACTGTGGCTGGAAGGGTTaGCTCTGTGGAGGACTCTGT +
Preference number: 5 (lower is better)
Translates to: TKLLPMEVSRERKPSFWNCGWKG*LCGGLC
Trigger: ACAGAGTCCTCCACAGAGCAAACCCTTCCAGCCACA...GTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCAGGCCAGGGAAAAGGTaGTTTGCAGTGAGATCACCA +
Preference number: 5 (lower is better)
Translates to: SSDFSGTLILICCLARRRRPGKR*FAVRSP
Trigger: TGGTGATCTCACTGCAAACAACCTTTTCCCTGGCCT...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACAGCATACGGGGACATTaGGAAATCTCCACTTTTGAA +
Preference number: 5 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHSIRGH*EISTFE
Trigger: TTCAAAAGTGGAGATTTCCAAATGTCCCCGTATGCT...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCTGTGAGCGAGGATTTTaGGGGTATTCAGCATACGGG +
Preference number: 5 (lower is better)
Translates to: SSDFSGTLILICCLARRRCERGF*GYSAYG
Trigger: CCCGTATGCTGAATACCCCAAAAATCCTCGCTCACA...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp TCCTACGACCATCTAGTTGCAGGTGGAGTTAGGACCCCAAACCAGGAGGCCAACATCTGGAGGAGGTTTTaGGTACTTCCATTCTCATGC +
Preference number: 5 (lower is better)
Translates to: SYDHLVAGGVRTPNQEANIWRRF*VLPFSC
Trigger: GCATGAGAATGGAAGTACCAAAAACCTCCTCCAGAT...GTTGGCCTCCTGGTTTGGGGTCCTAACTCCACCTGCAACTAGATGGTCGTAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482699.1
CDS-3UTR CAA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCGGGACACAGGAGTTCTaGCTTAAAACCATCAGGGCC +
Preference number: 5 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFIGTQEF*LKTIRA
Trigger: GGCCCTGATGGTTTTAAGCAAGAACTCCTGTGTCCC...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS TCA 90 bp ATCGCCCTCTCTGTTCCCATCTCCGAGGCTGTTCCACTCTTTGTTTaGAAAGCGGCAATTCTTTCATCGAACTCTGAACTGCTGGATGGC +
Preference number: 5 (lower is better)
Translates to: IALSVPISEAVPLFV*KAAILSSNSELLDG
Trigger: GCCATCCAGCAGTTCAGAGTTCGATGAAAGAATTGCCGCTTTTCAAACAAAGAGTGGAACAGCCTCGGAGATGGGAACAGAGAGGGCGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp ACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACGCAATTCTGGAGTCCTaGGGGAAGCCTTCTGTCTTG +
Preference number: 5 (lower is better)
Translates to: TKLLPMEVSRERKPSFWNAILES*GKPSVL
Trigger: CAAGACAGAAGGCTTCCCCAAGGACTCCAGAATTGC...GTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp ACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACGTCGCTGGAAGTCCTTaGTTCAATAGCTGTGCCACG +
Preference number: 5 (lower is better)
Translates to: TKLLPMEVSRERKPSFWNVAGSP*FNSCAT
Trigger: CGTGGCACAGCTATTGAACAAAGGACTTCCAGCGAC...GTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp TCCTACGACCATCTAGTTGCAGGTGGAGTTAGGACCCCAAACCAGGAGGCCAACAGCATACGGGGACATTaGGAAATCTCCACTTTTGAA +
Preference number: 5 (lower is better)
Translates to: SYDHLVAGGVRTPNQEANSIRGH*EISTFE
Trigger: TTCAAAAGTGGAGATTTCCAAATGTCCCCGTATGCT...GTTGGCCTCCTGGTTTGGGGTCCTAACTCCACCTGCAACTAGATGGTCGTAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000482699.1
CDS-3UTR CAA 90 bp ACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACAGCCACAAAGGGCCATaGGTTCTACAGAGAGAGAGG +
Preference number: 5 (lower is better)
Translates to: TKLLPMEVSRERKPSFWNSHKGP*VLQRER
Trigger: CCTCTCTCTCTGTAGAACCAATGGCCCTTTGTGGCT...GTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp TGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCTCTAACCACATCCAGCTGCGATAGAGGAGATGATTaGTCAGCTGTGACGTCAGCT +
Preference number: 5 (lower is better)
Translates to: CRKSNLPIQPIPLTTSSCDRGDD*SAVTSA
Trigger: AGCTGACGTCACAGCTGACAAATCATCTCCTCTATC...GCAGCTGGATGTGGTTAGAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp CCCGAAGGTCAACCCTCAGTTCCTCGACCAACCGGAAGTCTTCAGTTCTCCCACAGGTTTAAGCATCTCTaGAGCAGTTACACATCACTT +
Preference number: 5 (lower is better)
Translates to: PEGQPSVPRPTGSLQFSHRFKHL*SSYTSL
Trigger: AAGTGATGTGTAACTGCTCAAGAGATGCTTAAACCT...GTGGGAGAACTGAAGACTTCCGGTTGGTCGAGGAACTGAGGGTTGACCTTCGGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS CCA 90 bp CTGTTAAGGATGGAGGCAAAGGAGAGTTTGTTGTTACAGCTTTGGTaGACTCTGTGGGCAGAGACACCAGGCTTGGTGACTTTGATTCTG +
Preference number: 5 (lower is better)
Translates to: LLRMEAKESLLLQLW*TLWAETPGLVTLIL
Trigger: CAGAATCAAAGTCACCAAGCCTGGTGTCTCTGCCCACAGAGTCCACCAAAGCTGTAACAACAAACTCTCCTTTGCCTCCATCCTTAACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS-3UTR CAA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCGAGGCAAAGGAGAGTTaGTTGTTACAGCTTTGGTGG +
Preference number: 5 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSEAKES*LLQLWW
Trigger: CCACCAAAGCTGTAACAACAAACTCTCCTTTGCCTC...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp TGCAGGAAATCTAACCTGCCTATTCAGCCCATCCCTCTAACCACATCCAGCTGCAAACCTGCGTTCAGTTaGACATTTCTCCTCCATACG +
Preference number: 5 (lower is better)
Translates to: CRKSNLPIQPIPLTTSSCKPAFS*TFLLHT
Trigger: CGTATGGAGGAGAAATGTCAAACTGAACGCAGGTTT...GCAGCTGGATGTGGTTAGAGGGATGGGCTGAATAGGCAGGTTAGATTTCCTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp AGTTGTGTGCGGTGCCTCACACATTTCCTCACTGTGGGGGCTGGCTTGGAAACTTCTCTCTTGCCCTCTTaGATATTTAAGGTATACAGG +
Preference number: 5 (lower is better)
Translates to: SCVRCLTHFLTVGAGLETSLLPS*IFKVYR
Trigger: CCTGTATACCTTAAATATCAAAGAGGGCAAGAGAGA...AGTTTCCAAGCCAGCCCCCACAGTGAGGAAATGTGTGAGGCACCGCACACAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS TCA 90 bp ATCAGTGAACACGGTGGCAACATGCATTGTCTTTGTTTGACTGACTaGGGAGCTCTGGAGGCCAGTGGAGTTGTTAAGCTTCTCTGTACT +
Preference number: 5 (lower is better)
Translates to: ISEHGGNMHCLCLTD*GALEASGVVKLLCT
Trigger: AGTACAGAGAAGCTTAACAACTCCACTGGCCTCCAGAGCTCCTCAGTCAGTCAAACAAAGACAATGCATGTTGCCACCGTGTTCACTGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS TCA 90 bp GCTGTACTCTGCTGTAACGCCAAGCTTTGTGGTCATTTCTTTTGCTaGTGTGGGTACACTGGTCAAAGGGATCAATCCAGTGGTAGCATC +
Preference number: 5 (lower is better)
Translates to: AVLCCNAKLCGHFFC*CGYTGQRDQSSGSI
Trigger: GATGCTACCACTGGATTGATCCCTTTGACCAGTGTACCCACATCAGCAAAAGAAATGACCACAAAGCTTGGCGTTACAGCAGAGTACAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS CCA 90 bp TGCACAGAGGCCCTGGTTGATGGTAAAATTGATGAAAATAAATGGTaGGATTGTGACACAGAGGGCAGAGGCAAAGGAGGCCCTGAAGAA +
Preference number: 5 (lower is better)
Translates to: CTEALVDGKIDENKW*DCDTEGRGKGGPEE
Trigger: TTCTTCAGGGCCTCCTTTGCCTCTGCCCTCTGTGTCACAATCCCACCATTTATTTTCATCAATTTTACCATCAACCAGGGCCTCTGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000477536.1
ENST00000650592.1
CDS-3UTR CAA 90 bp ACCAAATTGCTGCCTATGGAAGTGTCTCGGGAAAGGAAGCCTTCTTTCTGGAACGGTTGGGGAATCATTTaGCCAACGCAAAGACGTAAG +
Preference number: 5 (lower is better)
Translates to: TKLLPMEVSRERKPSFWNGWGII*PTQRRK
Trigger: CTTACGTCTTTGCGTTGGCAAAATGATTCCCCAACC...GTTCCAGAAAGAAGGCTTCCTTTCCCGAGACACTTCCATAGGCAGCAATTTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCGATGTTCTCCAAAGGTaGGGGAATCATTTTGCCAAC +
Preference number: 5 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFIDVLQR*GNHFAN
Trigger: GTTGGCAAAATGATTCCCCAACCTTTGGAGAACATC...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp TCTTCAGACTTCAGTGGTACGCTCATCCTCATCTGTTGTTTAGCACGCAGGCGCCTTAAGGTCTGCAGTTaGACTACTATGGAGCATTGT +
Preference number: 5 (lower is better)
Translates to: SSDFSGTLILICCLARRRLKVCS*TTMEHC
Trigger: ACAATGCTCCATAGTAGTCAAACTGCAGACCTTAAG...GCGCCTGCGTGCTAAACAACAGATGAGGATGAGCGTACCACTGAAGTCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp AGCCTTGCCCAGAGCCTGGTCATGGTAGGAGCATGTCAGTTCATCCGCCTAAAGAAGGTTCTAACCAAATaGCATATCCCTTTTTCCAAC +
Preference number: 5 (lower is better)
Translates to: SLAQSLVMVGACQFIRLKKVLTK*HIPFSN
Trigger: GTTGGAAAAAGGGATATGCAATTTGGTTAGAACCTT...CTTTAGGCGGATGAACTGACATGCTCCTACCATGACCAGGCTCTGGGCAAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp CCTTACACTTGTAGGCTTTATAAGGTCCTACGACCATCTAGTTGCAGGTGGAGTTGTGAGCGAGGATTTTaGGGGTATTCAGCATACGGG +
Preference number: 5 (lower is better)
Translates to: PYTCRLYKVLRPSSCRWSCERGF*GYSAYG
Trigger: CCCGTATGCTGAATACCCCAAAAATCCTCGCTCACA...ACTCCACCTGCAACTAGATGGTCGTAGGACCTTATAAAGCCTACAAGTGTAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000482699.1
CDS-3UTR CAA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCACCGTTTTCTCGATGTaGGGATTCTTCCCAAGAATG +
Preference number: 5 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFITVFSM*GFFPRM
Trigger: CATTCTTGGGAAGAATCCCAACATCGAGAAAACGGT...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS CCA 90 bp TCTTTGTTTGAAAAGCGGCAATTCTTTCATCGAACTCTGAACTGCTaGATGGCAGGTGAAGACTTTCTGAGGCTAAGTTGCCACTCTGGG +
Preference number: 5 (lower is better)
Translates to: SLFEKRQFFHRTLNC*MAGEDFLRLSCHSG
Trigger: CCCAGAGTGGCAACTTAGCCTCAGAAAGTCTTCACCTGCCATCCAGCAGTTCAGAGTTCGATGAAAGAATTGCCGCTTTTCAAACAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CCA 90 bp ACATTTGTGCTAAGTTGGTGCTTGTGGCTGGAAGGGTTTGCTCTGTaGAGGACTCTGTTAAGGATGGAGGCAAAGGAGAGTTTGTTGTTA +
Preference number: 5 (lower is better)
Translates to: TFVLSWCLWLEGFAL*RTLLRMEAKESLLL
Trigger: TAACAACAAACTCTCCTTTGCCTCCATCCTTAACAGAGTCCTCCACAGAGCAAACCCTTCCAGCCACAAGCACCAACTTAGCACAAATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS-3UTR CAA 90 bp GGAGTCAGGCAGACAAGGGTTTCAGTCCTGCTTCTACAGGGCAAGCTATTTATCCTTTGGAGGACACTGTaGAAAAGTCCTCTTGATTCT +
Preference number: 5 (lower is better)
Translates to: GVRQTRVSVLLLQGKLFILWRTL*KSPLDS
Trigger: AGAATCAAGAGGACTTTTCAACAGTGTCCTCCAAAG...GATAAATAGCTTGCCCTGTAGAAGCAGGACTGAAACCCTTGTCTGCCTGACTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp GAAACCCATGAACAAGAAGCATTGTTGGAACTCACAGGACACCGTTTTCTCGATTGTGAGCGAGGATTTTaGGGGTATTCAGCATACGGG +
Preference number: 5 (lower is better)
Translates to: ETHEQEALLELTGHRFLDCERGF*GYSAYG
Trigger: CCCGTATGCTGAATACCCCAAAAATCCTCGCTCACA...ATCGAGAAAACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGTTCATGGGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp ACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGTGGAGACAATTCTAACAGCTTTGAGTGGTaGAAAGTTTACATGGGGTTT +
Preference number: 5 (lower is better)
Translates to: TISRNVKRDSPLQGGDNSNSFEW*KVYMGF
Trigger: AAACCCCATGTAAACTTTCAACCACTCAAAGCTGTT...AGAATTGTCTCCACCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp ACCATTTCCAGAAATGTGAAGCGGGACTCCCCGCTTCAGGGTGGAGACAATTCTCACCTATCAGCAATTTaGGCTCTAAATGTCTTAGCT +
Preference number: 5 (lower is better)
Translates to: TISRNVKRDSPLQGGDNSHLSAI*ALNVLA
Trigger: AGCTAAGACATTTAGAGCCAAAATTGCTGATAGGTG...AGAATTGTCTCCACCCTGAAGCGGGGAGTCCCGCTTCACATTTCTGGAAATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS GCA 90 bp CACTCTTTGTTTGAAAAGCGGCAATTCTTTCATCGAACTCTGAACTaGTGGATGGCAGGTGAAGACTTTCTGAGGCTAAGTTGCCACTCT +
Preference number: 5 (lower is better)
Translates to: HSLFEKRQFFHRTLN*WMAGEDFLRLSCHS
Trigger: AGAGTGGCAACTTAGCCTCAGAAAGTCTTCACCTGCCATCCAGCAGTTCAGAGTTCGATGAAAGAATTGCCGCTTTTCAAACAAAGAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS GCA 90 bp TACACATCCGTCATCTGGAGGAGGTTTTTGGTACTTCCATTCTCATaGATTTCAATAGCTTCTCGGCCCCATTCTTGTGAGCGAGGATTT +
Preference number: 5 (lower is better)
Translates to: YTSVIWRRFLVLPFS*ISIASRPHSCERGF
Trigger: AAATCCTCGCTCACAAGAATGGGGCCGAGAAGCTATTGAAATGCATGAGAATGGAAGTACCAAAAACCTCCTCCAGATGACGGATGTGTA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311127.9
ENST00000482699.1
ENST00000487661.1
ENST00000650592.1
CDS-3UTR CAA 90 bp GCTTCCCAAAGCACTGTTGATGCAGGAAATCTAACCTGCCTATTCAGCCCATCCAAAACCAAATATAAGTaGTTTTGCCCTGATCCAGGC +
Preference number: 5 (lower is better)
Translates to: ASQSTVDAGNLTCLFSPSKTKYK*FCPDPG
Trigger: GCCTGGATCAGGGCAAAACAACTTATATTTGGTTTT...GGATGGGCTGAATAGGCAGGTTAGATTTCCTGCATCAACAGTGCTTTGGGAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAAGGGAAGTCAGAGCTGTaGCTATCTCCAGTGAGTACC +
Preference number: 5 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKGKSEL*LSPVST
Trigger: GGTACTCACTGGAGATAGCAACAGCTCTGACTTCCC...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS-3UTR CAA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAATTCACAGCACAGCTGTaGACTGAGGCTGAAGAGGAC +
Preference number: 5 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKFTAQL*TEAEED
Trigger: GTCCTCTTCAGCCTCAGTCAACAGCTGTGCTGTGAA...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS GCA 90 bp GAGGAAGACCATGGTGTGGATGCATCAGAGGTAGACTTTAGTAGATaGACAGAGGCCCTGGTTGATGGTAAAATTGATGAAAATAAATGG +
Preference number: 5 (lower is better)
Translates to: EEDHGVDASEVDFSR*TEALVDGKIDENKW
Trigger: CCATTTATTTTCATCAATTTTACCATCAACCAGGGCCTCTGTGCATCTACTAAAGTCTACCTCTGATGCATCCACACCATGGTCTTCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS-3UTR CAA 90 bp GAAACCCATGAACAAGAAGCATTGTTGGAACTCACAGGACACCGTTTTCTCGATAAAACCAAATATAAGTaGTTTTGCCCTGATCCAGGC +
Preference number: 5 (lower is better)
Translates to: ETHEQEALLELTGHRFLDKTKYK*FCPDPG
Trigger: GCCTGGATCAGGGCAAAACAACTTATATTTGGTTTT...ATCGAGAAAACGGTGTCCTGTGAGTTCCAACAATGCTTCTTGTTCATGGGTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAAATCTGGAGGAGGTTTTaGGTACTTCCATTCTCATGC +
Preference number: 5 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKIWRRF*VLPFSC
Trigger: GCATGAGAATGGAAGTACCAAAAACCTCCTCCAGAT...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAAAAACCTGCGTTCAGTTaGACATTTCTCCTCCATACG +
Preference number: 5 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKKPAFS*TFLLHT
Trigger: CGTATGGAGGAGAAATGTCAAACTGAACGCAGGTTT...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp AGTCTCAAAACAGATCCAAAAGGAAACCTCCCACCCAATTTACTAAAGTGCAAATCTCTCTTGCCCTCTTaGATATTTAAGGTATACAGG +
Preference number: 5 (lower is better)
Translates to: SLKTDPKGNLPPNLLKCKSLLPS*IFKVYR
Trigger: CCTGTATACCTTAAATATCAAAGAGGGCAAGAGAGA...TTTGCACTTTAGTAAATTGGGTGGGAGGTTTCCTTTTGGATCTGTTTTGAGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000487661.1
CDS-3UTR CAA 90 bp TATTTCTTCAGCCGAATAAACAGCTTTGAGTGGTTGAAAGTTTACATGGGGTTTCCTCAGAATGACACTTaGTTAAGGGAGGAAATGAAA +
Preference number: 5 (lower is better)
Translates to: YFFSRINSFEWLKVYMGFPQNDT*LREEMK
Trigger: TTTCATTTCCTCCCTTAACAAAGTGTCATTCTGAGG...AAACCCCATGTAAACTTTCAACCACTCAAAGCTGTTTATTCGGCTGAAGAAATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CCA 72 bp GCCAATGTTTCCAGGCAGCATCCGCGCTCCCGCCTCTaGGGGCCCGGCCGGAGGGTCCCCGCTGTGTCGCGG +
Preference number: 6 (lower is better)
Translates to: ANVSRQHPRSRL*GPGRRVPAVSR
Trigger: CCGCGACACAGCGGGGACCCTCCGGCCGGGCCCCCAGAGGCGGGAGCGCGGATGCTGCCTGGAAACATTGGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS GCA 72 bp CACTGCAATCATCCCCTTGCCAGGAAGGCGGGCACCTaGAGTGGTAGCCACGGCTGGTGTTGTCTGCGACGC +
Preference number: 6 (lower is better)
Translates to: HCNHPLARKAGT*SGSHGWCCLRR
Trigger: GCGTCGCAGACAACACCAGCCGTGGCTACCACTGCAGGTGCCCGCCTTCCTGGCAAGGGGATGATTGCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000488654.1
ENST00000650592.1
CDS CAA 90 bp GTGTGGGTGCCGAGAGAGGGCACCCCAGAAGTCCTGTCCTCTGCATaGGCGGAACTGTCACCTAGTGCTTGGCCTGGCTCTCGGCTGTCT +
Preference number: 6 (lower is better)
Translates to: VWVPREGTPEVLSSA*AELSPSAWPGSRLS
Trigger: AGACAGCCGAGAGCCAGGCCAAGCACTAGGTGACAGTTCCGCCAATGCAGAGGACAGGACTTCTGGGGTGCCCTCTCTCGGCACCCACAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477536.1
ENST00000650592.1
CDS CAA 90 bp GCTGCAGGGCTGCCTGCTTCCCCAGAAGTCGTGCTCATGCTGGTGTaGGTGAGGGTGACAGACCGCAGTGTGCGTTCCCCGTTTCCAGTG +
Preference number: 6 (lower is better)
Translates to: AAGLPASPEVVLMLV*VRVTDRSVRSPFPV
Trigger: CACTGGAAACGGGGAACGCACACTGCGGTCTGTCACCCTCACCAACACCAGCATGAGCACGACTTCTGGGGAAGCAGGCAGCCCTGCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477536.1
ENST00000650592.1
CDS GCA 72 bp GACGGGCTCCAAGCCGAAGTGGTGGCCTCTTGGCTGTaGACAGTCCATTCTTCTGACAGCCCCATCGCCCTC +
Preference number: 6 (lower is better)
Translates to: DGLQAEVVASWL*TVHSSDSPIAL
Trigger: GAGGGCGATGGGGCTGTCAGAAGAATGGACTGTGCACAGCCAAGAGGCCACCACTTCGGCTTGGAGCCCGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CCA 72 bp GCCAGGAAGGCGGGCACCTGCAGTGGTAGCCACGGCTaGTGTTGTCTGCGACGCATTCGCCATTGTGAAGAC +
Preference number: 6 (lower is better)
Translates to: ARKAGTCSGSHG*CCLRRIRHCED
Trigger: GTCTTCACAATGGCGAATGCGTCGCAGACAACACCAGCCGTGGCTACCACTGCAGGTGCCCGCCTTCCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000488654.1
ENST00000650592.1
CDS CCA 72 bp GTGCGTTCCCCGTTTCCAGTGACAGTAGCCAAGGTGTaGGTGCCGAGAGAGGGCACCCCAGAAGTCCTGTCC +
Preference number: 6 (lower is better)
Translates to: VRSPFPVTVAKV*VPREGTPEVLS
Trigger: GGACAGGACTTCTGGGGTGCCCTCTCTCGGCACCCACACCTTGGCTACTGTCACTGGAAACGGGGAACGCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477536.1
ENST00000650592.1
CDS CAA 72 bp CTGCCTGCTTCCCCAGAAGTCGTGCTCATGCTGGTGTaGGTGAGGGTGACAGACCGCAGTGTGCGTTCCCCG +
Preference number: 6 (lower is better)
Translates to: LPASPEVVLMLV*VRVTDRSVRSP
Trigger: CGGGGAACGCACACTGCGGTCTGTCACCCTCACCAACACCAGCATGAGCACGACTTCTGGGGAAGCAGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000477536.1
ENST00000650592.1
CDS CAA 72 bp CGTCACGTTTACGTGCAGAGAGGCACCCTCTGTTTCTaGGTGCATGGCCGCTGCAGGGCTGCCTGCTTCCCC +
Preference number: 6 (lower is better)
Translates to: RHVYVQRGTLCF*VHGRCRAACFP
Trigger: GGGGAAGCAGGCAGCCCTGCAGCGGCCATGCACCAAGAAACAGAGGGTGCCTCTCTGCACGTAAACGTGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477536.1
ENST00000650592.1
CDS CCA 72 bp CGAGAGAGGGCACCCCAGAAGTCCTGTCCTCTGCATTaGCGGAACTGTCACCTAGTGCTTGGCCTGGCTCTC +
Preference number: 6 (lower is better)
Translates to: RERAPQKSCPLH*RNCHLVLGLAL
Trigger: GAGAGCCAGGCCAAGCACTAGGTGACAGTTCCGCCAATGCAGAGGACAGGACTTCTGGGGTGCCCTCTCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477536.1
ENST00000650592.1
CDS CCA 72 bp GTCACGTTTACGTGCAGAGAGGCACCCTCTGTTTCTTaGTGCATGGCCGCTGCAGGGCTGCCTGCTTCCCCA +
Preference number: 6 (lower is better)
Translates to: VTFTCREAPSVS*CMAAAGLPASP
Trigger: TGGGGAAGCAGGCAGCCCTGCAGCGGCCATGCACCAAGAAACAGAGGGTGCCTCTCTGCACGTAAACGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477536.1
ENST00000650592.1
CDS CAA 72 bp CCGAGAGAGGGCACCCCAGAAGTCCTGTCCTCTGCATaGGCGGAACTGTCACCTAGTGCTTGGCCTGGCTCT +
Preference number: 6 (lower is better)
Translates to: PREGTPEVLSSA*AELSPSAWPGS
Trigger: AGAGCCAGGCCAAGCACTAGGTGACAGTTCCGCCAATGCAGAGGACAGGACTTCTGGGGTGCCCTCTCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000477536.1
ENST00000650592.1
CDS GCA 72 bp CGGGCACCTGCAGTGGTAGCCACGGCTGGTGTTGTCTaGGACGCATTCGCCATTGTGAAGACAAGGGTTCAC +
Preference number: 6 (lower is better)
Translates to: RAPAVVATAGVV*DAFAIVKTRVH
Trigger: GTGAACCCTTGTCTTCACAATGGCGAATGCGTCGCAGACAACACCAGCCGTGGCTACCACTGCAGGTGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000488654.1
ENST00000650592.1
CDS GCA 72 bp CGTGAGACCAGGCCCATGTCGTCCGTCACGTTTACGTaGAGAGAGGCACCCTCTGTTTCTTGGTGCATGGCC +
Preference number: 6 (lower is better)
Translates to: RETRPMSSVTFT*REAPSVSWCMA
Trigger: GGCCATGCACCAAGAAACAGAGGGTGCCTCTCTGCACGTAAACGTGACGGACGACATGGGCCTGGTCTCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477536.1
ENST00000650592.1
CDS CAA 72 bp CAGGCACTCATTCACATCCACACTGCAATCATCCCCTaGCCAGGAAGGCGGGCACCTGCAGTGGTAGCCACG +
Preference number: 6 (lower is better)
Translates to: QALIHIHTAIIP*PGRRAPAVVAT
Trigger: CGTGGCTACCACTGCAGGTGCCCGCCTTCCTGGCAAGGGGATGATTGCAGTGTGGATGTGAATGAGTGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000488654.1
ENST00000650592.1
CDS CAA 90 bp TGGCACAGGGCAACGCCGTCCAGGTCAGTGCAGATGGAGGTGTCTTaGTCACATTCGGGACTCTTCCGCTTGCACAAGCTGCCCGCTCTA +
Preference number: 6 (lower is better)
Translates to: WHRATPSRSVQMEVS*SHSGLFRLHKLPAL
Trigger: TAGAGCGGGCAGCTTGTGCAAGCGGAAGAGTCCCGAATGTGACAAAGACACCTCCATCTGCACTGACCTGGACGGCGTTGCCCTGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000487661.1
ENST00000650592.1
CDS CAA 90 bp TGTGTGGTCGCTGGAAGTCCTTTGTTCAATAGCTGTGCCACGCACTaGACCGTAGCTAATCCCAGCGACTCCGAGTGCACTGGAGGCGGC +
Preference number: 6 (lower is better)
Translates to: CVVAGSPLFNSCATH*TVANPSDSECTGGG
Trigger: GCCGCCTCCAGTGCACTCGGAGTCGCTGGGATTAGCTACGGTCAAGTGCGTGGCACAGCTATTGAACAAAGGACTTCCAGCGACCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477536.1
ENST00000650592.1
CDS TCA 72 bp TGGGGAAGCCTTCTGTCTTGCTCACAGGTCCCAGACTaGCCGTCAAAGATCGCAGCGTTCTCGGGCCACCAT +
Preference number: 6 (lower is better)
Translates to: WGSLLSCSQVPD*PSKIAAFSGHH
Trigger: ATGGTGGCCCGAGAACGCTGCGATCTTTGACGGTCAGTCTGGGACCTGTGAGCAAGACAGAAGGCTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CCA 72 bp AGAAAGGACGGGCTCCAAGCCGAAGTGGTGGCCTCTTaGCTGTGCACAGTCCATTCTTCTGACAGCCCCATC +
Preference number: 6 (lower is better)
Translates to: RKDGLQAEVVAS*LCTVHSSDSPI
Trigger: GATGGGGCTGTCAGAAGAATGGACTGTGCACAGCCAAGAGGCCACCACTTCGGCTTGGAGCCCGTCCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CCA 72 bp ACTGGCACAGGGCAACGCCGTCCAGGTCAGTGCAGATaGAGGTGTCTTTGTCACATTCGGGACTCTTCCGCT +
Preference number: 6 (lower is better)
Translates to: TGTGQRRPGQCR*RCLCHIRDSSA
Trigger: AGCGGAAGAGTCCCGAATGTGACAAAGACACCTCCATCTGCACTGACCTGGACGGCGTTGCCCTGTGCCAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000487661.1
ENST00000650592.1
CDS CCA 72 bp CTGTCCTCTGCATTGGCGGAACTGTCACCTAGTGCTTaGCCTGGCTCTCGGCTGTCTTCCAAGGTCGAACGT +
Preference number: 6 (lower is better)
Translates to: LSSALAELSPSA*PGSRLSSKVER
Trigger: ACGTTCGACCTTGGAAGACAGCCGAGAGCCAGGCCAAGCACTAGGTGACAGTTCCGCCAATGCAGAGGACAG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477536.1
ENST00000650592.1
CDS TCA 72 bp CGTCACATTGGAGGCCAGGGAAAAGGTTGTTTGCAGTaGGATCACCACCGCGTTGGACTCCCTAGAGGCGTG +
Preference number: 6 (lower is better)
Translates to: RHIGGQGKGCLQ*DHHRVGLPRGV
Trigger: CACGCCTCTAGGGAGTCCAACGCGGTGGTGATCTCACTGCAAACAACCTTTTCCCTGGCCTCCAATGTGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS GCA 72 bp ACTTGCACTGGCACAGGGCAACGCCGTCCAGGTCAGTaGAGATGGAGGTGTCTTTGTCACATTCGGGACTCT +
Preference number: 6 (lower is better)
Translates to: TCTGTGQRRPGQ*RWRCLCHIRDS
Trigger: AGAGTCCCGAATGTGACAAAGACACCTCCATCTGCACTGACCTGGACGGCGTTGCCCTGTGCCAGTGCAAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000487661.1
ENST00000650592.1
CDS CAA 72 bp GCAACGCCGTCCAGGTCAGTGCAGATGGAGGTGTCTTaGTCACATTCGGGACTCTTCCGCTTGCACAAGCTG +
Preference number: 6 (lower is better)
Translates to: ATPSRSVQMEVS*SHSGLFRLHKL
Trigger: CAGCTTGTGCAAGCGGAAGAGTCCCGAATGTGACAAAGACACCTCCATCTGCACTGACCTGGACGGCGTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000487661.1
ENST00000650592.1
CDS TCA 72 bp GGAGCATCCGAAGCAGCATGGCTCTTCCCAGAGGTCTaGACCATCACGCCCTCTTTGGAGGACACTGTTGAA +
Preference number: 6 (lower is better)
Translates to: GASEAAWLFPEV*TITPSLEDTVE
Trigger: TTCAACAGTGTCCTCCAAAGAGGGCGTGATGGTTCAGACCTCTGGGAAGAGCCATGCTGCTTCGGATGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS TCA 72 bp TACGGCTATAGGGCCAGTGACCAGAGATGCTGTGCTTaGCAGGGTGCCAGGAGTGGTCATAAGAGGCTGAGA +
Preference number: 6 (lower is better)
Translates to: YGYRASDQRCCA*QGARSGHKRLR
Trigger: TCTCAGCCTCTTATGACCACTCCTGGCACCCTGTCAAGCACAGCATCTCTGGTCACTGGCCCTATAGCCGTA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS TCA 72 bp CCACGGCTGGTGTTGTCTGCGACGCATTCGCCATTGTaGAGACAAGGGTTCACAGCACAGCTGTTGACTGAG +
Preference number: 6 (lower is better)
Translates to: PRLVLSATHSPL*RQGFTAQLLTE
Trigger: CTCAGTCAACAGCTGTGCTGTGAACCCTTGTCTTCACAATGGCGAATGCGTCGCAGACAACACCAGCCGTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS CCA 72 bp GGTGATGTTTTCTACATGGGCCTCAGTGTTACTTTCTaGCCAATGTTTCCAGGCAGCATCCGCGCTCCCGCC +
Preference number: 6 (lower is better)
Translates to: GDVFYMGLSVTF*PMFPGSIRAPA
Trigger: GGCGGGAGCGCGGATGCTGCCTGGAAACATTGGCCAGAAAGTAACACTGAGGCCCATGTAGAAAACATCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CCA 72 bp GGACTGAGGATGAAGTCGTGGCAATTCTGGAGTCCTTaGGGAAGCCTTCTGTCTTGCTCACAGGTCCCAGAC +
Preference number: 6 (lower is better)
Translates to: GLRMKSWQFWSP*GSLLSCSQVPD
Trigger: GTCTGGGACCTGTGAGCAAGACAGAAGGCTTCCCCAAGGACTCCAGAATTGCCACGACTTCATCCTCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CAA 72 bp GTGGCAATTCTGGAGTCCTTGGGGAAGCCTTCTGTCTaGCTCACAGGTCCCAGACTGACCGTCAAAGATCGC +
Preference number: 6 (lower is better)
Translates to: VAILESLGKPSV*LTGPRLTVKDR
Trigger: GCGATCTTTGACGGTCAGTCTGGGACCTGTGAGCAAGACAGAAGGCTTCCCCAAGGACTCCAGAATTGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CAA 90 bp GATGAAGTCGTGGCAATTCTGGAGTCCTTGGGGAAGCCTTCTGTCTaGCTCACAGGTCCCAGACTGACCGTCAAAGATCGCAGCGTTCTC +
Preference number: 6 (lower is better)
Translates to: DEVVAILESLGKPSV*LTGPRLTVKDRSVL
Trigger: GAGAACGCTGCGATCTTTGACGGTCAGTCTGGGACCTGTGAGCAAGACAGAAGGCTTCCCCAAGGACTCCAGAATTGCCACGACTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CAA 90 bp GGTGAAAGAAGGACTGAGGATGAAGTCGTGGCAATTCTGGAGTCCTaGGGGAAGCCTTCTGTCTTGCTCACAGGTCCCAGACTGACCGTC +
Preference number: 6 (lower is better)
Translates to: GERRTEDEVVAILES*GKPSVLLTGPRLTV
Trigger: GACGGTCAGTCTGGGACCTGTGAGCAAGACAGAAGGCTTCCCCAAGGACTCCAGAATTGCCACGACTTCATCCTCAGTCCTTCTTTCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CAA 90 bp TGTGTGGTCGCTGGAAGTCCTTTGTTCAATAGCTGTGCCACGCACTaGACCGTAGCTAATCCCAGCGATCGAACGTTCTCCACGTGGTGC +
Preference number: 6 (lower is better)
Translates to: CVVAGSPLFNSCATH*TVANPSDRTFSTWC
Trigger: GCACCACGTGGAGAACGTTCGATCGCTGGGATTAGCTACGGTCAAGTGCGTGGCACAGCTATTGAACAAAGGACTTCCAGCGACCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS TCA 72 bp TGTGGTTTGGGGAGAAGGAGATGTTCCGAGGGAACGTaGAGCTGGGCTGTACTCTGCTGTAACGCCAAGCTT +
Preference number: 6 (lower is better)
Translates to: CGLGRRRCSEGT*SWAVLCCNAKL
Trigger: AAGCTTGGCGTTACAGCAGAGTACAGCCCAGCTTCACGTTCCCTCGGAACATCTCCTTCTCCCCAAACCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS TCA 72 bp TGGTACCCAACCGGGCATTTGCAGATAAAGGATCCCTaGGTATTGTTGCACATGGCTGTGGATGGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: WYPTGHLQIKDP*VLLHMAVDGQG
Trigger: CCCCTGCCCATCCACAGCCATGTGCAACAATACTCAGGGATCCTTTATCTGCAAATGCCCGGTTGGGTACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000488654.1
ENST00000650592.1
CDS TCA 72 bp TCACATGCTCGGCAGGAGTGGTCCATCTTGTTGAACTaGAAGTATCCCGACTTGCACTGGCACAGGGCAACG +
Preference number: 6 (lower is better)
Translates to: SHARQEWSILLN*KYPDLHWHRAT
Trigger: CGTTGCCCTGTGCCAGTGCAAGTCGGGATACTTTCAGTTCAACAAGATGGACCACTCCTGCCGAGCATGTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000487661.1
ENST00000650592.1
CDS CCA 72 bp GGGTGTGTAGGACGGAAGGTTGGATGTATGCAGAACTaGCGACTCAGTAGAAGGCTGAGCATATTCCCCGTC +
Preference number: 6 (lower is better)
Translates to: GCVGRKVGCMQN*RLSRRLSIFPV
Trigger: GACGGGGAATATGCTCAGCCTTCTACTGAGTCGCCAGTTCTGCATACATCCAACCTTCCGTCCTACACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000477536.1
ENST00000650592.1
CDS CCA 72 bp GGAGCCAAGTCTTCAGCCGTGGAAACAACTGTGGTTTaGGGAGAAGGAGATGTTCCGAGGGAACGTGAAGCT +
Preference number: 6 (lower is better)
Translates to: GAKSSAVETTVV*GEGDVPREREA
Trigger: AGCTTCACGTTCCCTCGGAACATCTCCTTCTCCCCAAACCACAGTTGTTTCCACGGCTGAAGACTTGGCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS CAA 72 bp AGGACTGAGGATGAAGTCGTGGCAATTCTGGAGTCCTaGGGGAAGCCTTCTGTCTTGCTCACAGGTCCCAGA +
Preference number: 6 (lower is better)
Translates to: RTEDEVVAILES*GKPSVLLTGPR
Trigger: TCTGGGACCTGTGAGCAAGACAGAAGGCTTCCCCAAGGACTCCAGAATTGCCACGACTTCATCCTCAGTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CAA 72 bp CAGGTAGGTGTGGTCTGTGTGGTCGCTGGAAGTCCTTaGTTCAATAGCTGTGCCACGCACTTGACCGTAGCT +
Preference number: 6 (lower is better)
Translates to: QVGVVCVVAGSP*FNSCATHLTVA
Trigger: AGCTACGGTCAAGTGCGTGGCACAGCTATTGAACAAAGGACTTCCAGCGACCACACAGACCACACCTACCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000477536.1
ENST00000650592.1
CDS CAA 72 bp GGTCAAATAGCGTCACATTGGAGGCCAGGGAAAAGGTaGTTTGCAGTGAGATCACCACCGCGTTGGACTCCC +
Preference number: 6 (lower is better)
Translates to: GQIASHWRPGKR*FAVRSPPRWTP
Trigger: GGGAGTCCAACGCGGTGGTGATCTCACTGCAAACAACCTTTTCCCTGGCCTCCAATGTGACGCTATTTGACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000487661.1
ENST00000650592.1
CDS CAA 72 bp GCTGGAAGTCCTTTGTTCAATAGCTGTGCCACGCACTaGACCGTAGCTAATCCCAGCGACTCCGAGTGCACT +
Preference number: 6 (lower is better)
Translates to: AGSPLFNSCATH*TVANPSDSECT
Trigger: AGTGCACTCGGAGTCGCTGGGATTAGCTACGGTCAAGTGCGTGGCACAGCTATTGAACAAAGGACTTCCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000477536.1
ENST00000650592.1
CDS TCA 72 bp CCGTCAAAGATCGCAGCGTTCTCGGGCCACCATCAGTaGACACGGTGGCAACATGCATTGTCTTTGTTTGAC +
Preference number: 6 (lower is better)
Translates to: PSKIAAFSGHHQ*TRWQHALSLFD
Trigger: GTCAAACAAAGACAATGCATGTTGCCACCGTGTTCACTGATGGTGGCCCGAGAACGCTGCGATCTTTGACGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS TCA 72 bp CTCATGGGTGCGACTGACCTAGACACAGTCTCAGTCTaGGACATGGGACTTCCATTTTGCACCTCAGAGCTG +
Preference number: 6 (lower is better)
Translates to: LMGATDLDTVSV*DMGLPFCTSEL
Trigger: CAGCTCTGAGGTGCAAAATGGAAGTCCCATGTCTCAGACTGAGACTGTGTCTAGGTCAGTCGCACCCATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS TCA 72 bp CATCTTCACATGCTCGGCAGGAGTGGTCCATCTTGTTaGACTGAAAGTATCCCGACTTGCACTGGCACAGGG +
Preference number: 6 (lower is better)
Translates to: HLHMLGRSGPSC*TESIPTCTGTG
Trigger: CCCTGTGCCAGTGCAAGTCGGGATACTTTCAGTTCAACAAGATGGACCACTCCTGCCGAGCATGTGAAGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000487661.1
ENST00000650592.1
CDS GCA 72 bp AGGCTGAAGAGGACACTGTTGTTGGTGACTGTGTGCTaGTCTGAACAGCAAAGGTGGCAGATTTGGGAGCCA +
Preference number: 6 (lower is better)
Translates to: RLKRTLLLVTVC*SEQQRWQIWEP
Trigger: TGGCTCCCAAATCTGCCACCTTTGCTGTTCAGAGCAGCACACAGTCACCAACAACAGTGTCCTCTTCAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS GCA 72 bp CTGAGGCTGAAGAGGACACTGTTGTTGGTGACTGTGTaGTGCTCTGAACAGCAAAGGTGGCAGATTTGGGAG +
Preference number: 6 (lower is better)
Translates to: LRLKRTLLLVTV*CSEQQRWQIWE
Trigger: CTCCCAAATCTGCCACCTTTGCTGTTCAGAGCAGCACACAGTCACCAACAACAGTGTCCTCTTCAGCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS CCA 72 bp CTGCAGAGGGTGAAAGAAGGACTGAGGATGAAGTCGTaGCAATTCTGGAGTCCTTGGGGAAGCCTTCTGTCT +
Preference number: 6 (lower is better)
Translates to: LQRVKEGLRMKS*QFWSPWGSLLS
Trigger: AGACAGAAGGCTTCCCCAAGGACTCCAGAATTGCCACGACTTCATCCTCAGTCCTTCTTTCACCCTCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CAA 72 bp GCTGGAAGTCCTTTGTTCAATAGCTGTGCCACGCACTaGACCGTAGCTAATCCCAGCGATCGAACGTTCTCC +
Preference number: 6 (lower is better)
Translates to: AGSPLFNSCATH*TVANPSDRTFS
Trigger: GGAGAACGTTCGATCGCTGGGATTAGCTACGGTCAAGTGCGTGGCACAGCTATTGAACAAAGGACTTCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CAA 90 bp GCCCCATCGCCCTCTCTGTTCCCATCTCCGAGGCTGTTCCACTCTTaGTTTGAAAAGCGGCAATTCTTTCATCGAACTCTGAACTGCTGG +
Preference number: 6 (lower is better)
Translates to: APSPSLFPSPRLFHS*FEKRQFFHRTLNCW
Trigger: CCAGCAGTTCAGAGTTCGATGAAAGAATTGCCGCTTTTCAAACAAAGAGTGGAACAGCCTCGGAGATGGGAACAGAGAGGGCGATGGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS TCA 72 bp TGTCCTGTAGAAATGCAGCCAGGAGAGATCTGGTCCTaGGGAATTTCTCTTCCTAGAAGGCGTGGTCAGCTC +
Preference number: 6 (lower is better)
Translates to: CPVEMQPGEIWS*GISLPRRRGQL
Trigger: GAGCTGACCACGCCTTCTAGGAAGAGAAATTCCTCAGGACCAGATCTCTCCTGGCTGCATTTCTACAGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CCA 72 bp GTGAAAGAAGGACTGAGGATGAAGTCGTGGCAATTCTaGAGTCCTTGGGGAAGCCTTCTGTCTTGCTCACAG +
Preference number: 6 (lower is better)
Translates to: VKEGLRMKSWQF*SPWGSLLSCSQ
Trigger: CTGTGAGCAAGACAGAAGGCTTCCCCAAGGACTCCAGAATTGCCACGACTTCATCCTCAGTCCTTCTTTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CCA 72 bp TTGTTGGTGACTGTGTGCTGCTCTGAACAGCAAAGGTaGCAGATTTGGGAGCCAAGTCTTCAGCCGTGGAAA +
Preference number: 6 (lower is better)
Translates to: LLVTVCCSEQQR*QIWEPSLQPWK
Trigger: TTTCCACGGCTGAAGACTTGGCTCCCAAATCTGCCACCTTTGCTGTTCAGAGCAGCACACAGTCACCAACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS CAA 72 bp CTGAGGCTAAGTTGCCACTCTGGGAAGTCAGAGCTGTaGCTATCTCCAGTGAGTACCCAACAGGCAAAATGG +
Preference number: 6 (lower is better)
Translates to: LRLSCHSGKSEL*LSPVSTQQAKW
Trigger: CCATTTTGCCTGTTGGGTACTCACTGGAGATAGCAACAGCTCTGACTTCCCAGAGTGGCAACTTAGCCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CAA 72 bp AGACACAGTCTCAGTCTGAGACATGGGACTTCCATTTaGCACCTCAGAGCTGCTGGCAAGCTGATGTTCTCC +
Preference number: 6 (lower is better)
Translates to: RHSLSLRHGTSI*HLRAAGKLMFS
Trigger: GGAGAACATCAGCTTGCCAGCAGCTCTGAGGTGCAAAATGGAAGTCCCATGTCTCAGACTGAGACTGTGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CAA 90 bp TTGACACATTTCTGCATCCTATCAGCCAGGTCAAATAGCGTCACATaGGAGGCCAGGGAAAAGGTTGTTTGCAGTGAGATCACCACCGCG +
Preference number: 6 (lower is better)
Translates to: LTHFCILSARSNSVT*EAREKVVCSEITTA
Trigger: CGCGGTGGTGATCTCACTGCAAACAACCTTTTCCCTGGCCTCCAATGTGACGCTATTTGACCTGGCTGATAGGATGCAGAAATGTGTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000487661.1
ENST00000650592.1
CDS TCA 72 bp CACGGTGGCAACATGCATTGTCTTTGTTTGACTGACTaGGGAGCTCTGGAGGCCAGTGGAGTTGTTAAGCTT +
Preference number: 6 (lower is better)
Translates to: HGGNMHCLCLTD*GALEASGVVKL
Trigger: AAGCTTAACAACTCCACTGGCCTCCAGAGCTCCTCAGTCAGTCAAACAAAGACAATGCATGTTGCCACCGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS GCA 72 bp TCTGAGACATGGGACTTCCATTTTGCACCTCAGAGCTaGTGGCAAGCTGATGTTCTCCAAAGGTTGGGGAAT +
Preference number: 6 (lower is better)
Translates to: SETWDFHFAPQS*WQADVLQRLGN
Trigger: ATTCCCCAACCTTTGGAGAACATCAGCTTGCCAGCAGCTCTGAGGTGCAAAATGGAAGTCCCATGTCTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CCA 72 bp GGCTCTTCCCAGAGGTCTGAACCATCACGCCCTCTTTaGAGGACACTGTTGAAAAGTCCTCTTGATTCTGAT +
Preference number: 6 (lower is better)
Translates to: GSSQRSEPSRPL*RTLLKSPLDSD
Trigger: ATCAGAATCAAGAGGACTTTTCAACAGTGTCCTCCAAAGAGGGCGTGATGGTTCAGACCTCTGGGAAGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CAA 72 bp TGGAGGACTCTGTTAAGGATGGAGGCAAAGGAGAGTTaGTTGTTACAGCTTTGGTGGACTCTGTGGGCAGAG +
Preference number: 6 (lower is better)
Translates to: WRTLLRMEAKES*LLQLWWTLWAE
Trigger: CTCTGCCCACAGAGTCCACCAAAGCTGTAACAACAAACTCTCCTTTGCCTCCATCCTTAACAGAGTCCTCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS CAA 72 bp AAGAGCTGGCAGACCTCAGCAGAGGACTTGCAGGAGTaGACACATTTCTGCATCCTATCAGCCAGGTCAAAT +
Preference number: 6 (lower is better)
Translates to: KSWQTSAEDLQE*THFCILSARSN
Trigger: ATTTGACCTGGCTGATAGGATGCAGAAATGTGTCAACTCCTGCAAGTCCTCTGCTGAGGTCTGCCAGCTCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000487661.1
ENST00000650592.1
CDS CCA 72 bp AGTGTAGGCCGGGTAGAGTCCGTTTCGTTCAAGTTCTaGATTCCTTACACTTGTAGGCGAGTAGTACACATC +
Preference number: 6 (lower is better)
Translates to: SVGRVESVSFKF*IPYTCRRVVHI
Trigger: GATGTGTACTACTCGCCTACAAGTGTAAGGAATCCAGAACTTGAACGAAACGGACTCTACCCGGCCTACACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311127.9
ENST00000487661.1
ENST00000650592.1
CDS CAA 72 bp CCCTCTCTGTTCCCATCTCCGAGGCTGTTCCACTCTTaGTTTGAAAAGCGGCAATTCTTTCATCGAACTCTG +
Preference number: 6 (lower is better)
Translates to: PSLFPSPRLFHS*FEKRQFFHRTL
Trigger: CAGAGTTCGATGAAAGAATTGCCGCTTTTCAAACAAAGAGTGGAACAGCCTCGGAGATGGGAACAGAGAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CAA 90 bp GTCTTCAGAATGGTAGTTGTGAAAGTTGGAGACATTTGTGCTAAGTaGGTGCTTGTGGCTGGAAGGGTTTGCTCTGTGGAGGACTCTGTT +
Preference number: 6 (lower is better)
Translates to: VFRMVVVKVGDICAK*VLVAGRVCSVEDSV
Trigger: AACAGAGTCCTCCACAGAGCAAACCCTTCCAGCCACAAGCACCAACTTAGCACAAATGTCTCCAACTTTCACAACTACCATTCTGAAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS TCA 72 bp ATTCTTTCATCGAACTCTGAACTGCTGGATGGCAGGTaGAGACTTTCTGAGGCTAAGTTGCCACTCTGGGAA +
Preference number: 6 (lower is better)
Translates to: ILSSNSELLDGR*RLSEAKLPLWE
Trigger: TTCCCAGAGTGGCAACTTAGCCTCAGAAAGTCTTCACCTGCCATCCAGCAGTTCAGAGTTCGATGAAAGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CCA 72 bp GAAAAGCGGCAATTCTTTCATCGAACTCTGAACTGCTaGATGGCAGGTGAAGACTTTCTGAGGCTAAGTTGC +
Preference number: 6 (lower is better)
Translates to: EKRQFFHRTLNC*MAGEDFLRLSC
Trigger: GCAACTTAGCCTCAGAAAGTCTTCACCTGCCATCCAGCAGTTCAGAGTTCGATGAAAGAATTGCCGCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS CCA 72 bp AGGCTTGGTGACTTTGATTCTGTAATGACTTTCTCTTaGTGTGGGGTGCTCTGGCTCTTAAGGTCTGCAGTT +
Preference number: 6 (lower is better)
Translates to: RLGDFDSVMTFS*CGVLWLLRSAV
Trigger: AACTGCAGACCTTAAGAGCCAGAGCACCCCACACCAAGAGAAAGTCATTACAGAATCAAAGTCACCAAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS TCA 72 bp TCTGTTCCCATCTCCGAGGCTGTTCCACTCTTTGTTTaGAAAGCGGCAATTCTTTCATCGAACTCTGAACTG +
Preference number: 6 (lower is better)
Translates to: SVPISEAVPLFV*KAAILSSNSEL
Trigger: CAGTTCAGAGTTCGATGAAAGAATTGCCGCTTTTCAAACAAAGAGTGGAACAGCCTCGGAGATGGGAACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311127.9
CDS TCA 72 bp TGCTGTAACGCCAAGCTTTGTGGTCATTTCTTTTGCTaGTGTGGGTACACTGGTCAAAGGGATCAATCCAGT +
Preference number: 6 (lower is better)
Translates to: CCNAKLCGHFFC*CGYTGQRDQSS
Trigger: ACTGGATTGATCCCTTTGACCAGTGTACCCACATCAGCAAAAGAAATGACCACAAAGCTTGGCGTTACAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311127.9
ENST00000650592.1
CDS GCA 72 bp GTCATCTGGAGGAGGTTTTTGGTACTTCCATTCTCATaGATTTCAATAGCTTCTCGGCCCCATTCTTGTGAG +
Preference number: 6 (lower is better)
Translates to: VIWRRFLVLPFS*ISIASRPHSCE
Trigger: CTCACAAGAATGGGGCCGAGAAGCTATTGAAATGCATGAGAATGGAAGTACCAAAAACCTCCTCCAGATGAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311127.9
ENST00000482699.1
ENST00000487661.1
ENST00000650592.1
CDS CCA 72 bp AGTCTCTTACCCAAATTGCATATCCCTTTTTCCAACTaGTACCCAACCGGGCATTTGCAGATAAAGGATCCC +
Preference number: 6 (lower is better)
Translates to: SLLPKLHIPFSN*YPTGHLQIKDP
Trigger: GGGATCCTTTATCTGCAAATGCCCGGTTGGGTACCAGTTGGAAAAAGGGATATGCAATTTGGGTAAGAGACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000488654.1
CDS GCA 72 bp TTTGAAAAGCGGCAATTCTTTCATCGAACTCTGAACTaGTGGATGGCAGGTGAAGACTTTCTGAGGCTAAGT +
Preference number: 6 (lower is better)
Translates to: FEKRQFFHRTLN*WMAGEDFLRLS
Trigger: ACTTAGCCTCAGAAAGTCTTCACCTGCCATCCAGCAGTTCAGAGTTCGATGAAAGAATTGCCGCTTTTCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311127.9