RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HECW2 (Homo sapiens)

Ensembl gene IDs: ENSG00000138411

Ensembl transcript IDs: ENST00000260983.8, ENST00000427457.2, ENST00000462290.1, ENST00000498146.2, ENST00000642318.1, ENST00000642531.1, ENST00000642884.1, ENST00000644030.1, ENST00000644256.1, ENST00000644405.1, ENST00000644421.1, ENST00000644978.2, ENST00000645468.1, ENST00000645770.1, ENST00000647236.1, ENST00000647314.1, ENST00000647402.1

Found 1802 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCTGGGCAGTTGCCCCTTCACAGGTGCCTTGGGCCTCCCCAGCACTaGCTTCTTCTTGCGGTGGGCTCTCGGCAGCAGCTGCAGCTCCCT +
Preference number: 1 (lower is better)
Translates to: PGQLPLHRCLGPPQH*LLLAVGSRQQLQLP
Trigger: AGGGAGCTGCAGCTGCTGCCGAGAGCCCACCGCAAGAAGAAGGCAGTGCTGGGGAGGCCCAAGGCACCTGTGAAGGGGCAACTGCCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 90 bp CCAGTAGCGCCCTCCTCCTGGGCAGTTGCCCCTTCACAGGTGCCTTaGGCCTCCCCAGCACTGCCTTCTTCTTGCGGTGGGCTCTCGGCA +
Preference number: 1 (lower is better)
Translates to: PVAPSSWAVAPSQVP*ASPALPSSCGGLSA
Trigger: TGCCGAGAGCCCACCGCAAGAAGAAGGCAGTGCTGGGGAGGCCCAAGGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 90 bp CCAGACCTCCCCCAGCTCCTCCTGGTCAGGTACAGTGGCCGATTCTaGCCCTGGCCCTTCATCCTCCCCACTGGGCACCTGTACCACAGG +
Preference number: 1 (lower is better)
Translates to: PDLPQLLLVRYSGRF*PWPFILPTGHLYHR
Trigger: CCTGTGGTACAGGTGCCCAGTGGGGAGGATGAAGGGCCAGGGGCAGAATCGGCCACTGTACCTGACCAGGAGGAGCTGGGGGAGGTCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 90 bp GCCGTTGGCTTGAGAACCTCCAGTAGCGCCCTCCTCCTGGGCAGTTaGCCCTTCACAGGTGCCTTGGGCCTCCCCAGCACTGCCTTCTTC +
Preference number: 1 (lower is better)
Translates to: AVGLRTSSSALLLGS*PFTGALGLPSTAFF
Trigger: GAAGAAGGCAGTGCTGGGGAGGCCCAAGGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGGAGGTTCTCAAGCCAACGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 90 bp CAGCAGTGCACACGGATTCCTGCGACCCTTCGGCAGGGCCACTGCTaGTGGGCTCTGCTGCACAGGCTCCGTCTTCCTCCTCCTGAGAAG +
Preference number: 1 (lower is better)
Translates to: QQCTRIPATLRQGHC*WALLHRLRLPPPEK
Trigger: CTTCTCAGGAGGAGGAAGACGGAGCCTGTGCAGCAGAGCCCACCAGCAGTGGCCCTGCCGAAGGGTCGCAGGAATCCGTGTGCACTGCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 90 bp CACGGATTCCTGCGACCCTTCGGCAGGGCCACTGCTGGTGGGCTCTaGTGCACAGGCTCCGTCTTCCTCCTCCTGAGAAGAAAAGGCTGG +
Preference number: 1 (lower is better)
Translates to: HGFLRPFGRATAGGL*CTGSVFLLLRRKGW
Trigger: CCAGCCTTTTCTTCTCAGGAGGAGGAAGACGGAGCCTGTGCAGCAGAGCCCACCAGCAGTGGCCCTGCCGAAGGGTCGCAGGAATCCGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 90 bp CATCCTCCCCACTGGGCACCTGTACCACAGGTAAAGAACCAGCAGTaGACACGGATTCCTGCGACCCTTCGGCAGGGCCACTGCTGGTGG +
Preference number: 1 (lower is better)
Translates to: HPPHWAPVPQVKNQQ*TRIPATLRQGHCWW
Trigger: CCACCAGCAGTGGCCCTGCCGAAGGGTCGCAGGAATCCGTGTGCACTGCTGGTTCTTTACCTGTGGTACAGGTGCCCAGTGGGGAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 90 bp TATCGCCGGTTCAGCTGCTCCATTTGCTGTATGGAGTTAGATCTCTaGAGCACCTGCGGGGCTGGGGGAGCTGTCGGTCGCTGCCACGTC +
Preference number: 1 (lower is better)
Translates to: YRRFSCSICCMELDL*STCGAGGAVGRCHV
Trigger: GACGTGGCAGCGACCGACAGCTCCCCCAGCCCCGCAGGTGCTGCAGAGATCTAACTCCATACAGCAAATGGAGCAGCTGAACCGGCGATA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 90 bp TTTGGTGGGAGAGCCTCGTCCACCCTCTGGTACCGGCTAACATCCTaGCGCACTGAAGGTAGTGATCGCAGTGGCTGGTGGCCGTTGGCT +
Preference number: 1 (lower is better)
Translates to: FGGRASSTLWYRLTS*RTEGSDRSGWWPLA
Trigger: AGCCAACGGCCACCAGCCACTGCGATCACTACCTTCAGTGCGCCAGGATGTTAGCCGGTACCAGAGGGTGGACGAGGCTCTCCCACCAAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 90 bp AGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAGGCCTGGTaGTGGCTTCGCTCACACTCTCTGTCCTGGCAGGATCACTGGGTT +
Preference number: 1 (lower is better)
Translates to: RSCQRIPGHSLPQAW*WLRSHSLSWQDHWV
Trigger: AACCCAGTGATCCTGCCAGGACAGAGAGTGTGAGCGAAGCCAGCACCAGGCCTGAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 90 bp AGCACCGTGTGTCCACAGAGGACAGCTGCGTGGTCACACTCTCATTaGAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAGGCC +
Preference number: 1 (lower is better)
Translates to: STVCPQRTAAWSHSH*RSCQRIPGHSLPQA
Trigger: GGCCTGAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGTGTGACCACGCAGCTGTCCTCTGTGGACACACGGTGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 90 bp TTCAGCTGCTCCATTTGCTGTATGGAGTTAGATCTCTGCAGCACCTaGGGGGCTGGGGGAGCTGTCGGTCGCTGCCACGTCGTGGTTCTG +
Preference number: 1 (lower is better)
Translates to: FSCSICCMELDLCST*GAGGAVGRCHVVVL
Trigger: CAGAACCACGACGTGGCAGCGACCGACAGCTCCCCCAGCCCCGCAGGTGCTGCAGAGATCTAACTCCATACAGCAAATGGAGCAGCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 90 bp AGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAGGCCTGGTGCTaGCTTCGCTCACACTCTCTGTCCTGGCAGGATCACTGGGTTCTG +
Preference number: 1 (lower is better)
Translates to: SCQRIPGHSLPQAWC*LRSHSLSWQDHWVL
Trigger: CAGAACCCAGTGATCCTGCCAGGACAGAGAGTGTGAGCGAAGCCAGCACCAGGCCTGAGGGAGAGAGTGACCTGGAATGCGCTGACAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 90 bp CTGATCGAGAGACTCGGTCTCACTGACGGCTCTTCGGCTTCCTCCTaGTGCATCGGAAGTCCCTGTGTCTGCGCCACTTGTGGGCTGATC +
Preference number: 1 (lower is better)
Translates to: LIERLGLTDGSSASS*CIGSPCVCATCGLI
Trigger: GATCAGCCCACAAGTGGCGCAGACACAGGGACTTCCGATGCATCAGGAGGAAGCCGAAGAGCCGTCAGTGAGACCGAGTCTCTCGATCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 90 bp ACACCTGGGAAGGCTCAGAGCCCTGATCGAGAGACTCGGTCTCACTaGCGGCTCTTCGGCTTCCTCCTGATGCATCGGAAGTCCCTGTGT +
Preference number: 1 (lower is better)
Translates to: TPGKAQSPDRETRSH*RLFGFLLMHRKSLC
Trigger: ACACAGGGACTTCCGATGCATCAGGAGGAAGCCGAAGAGCCGTCAGTGAGACCGAGTCTCTCGATCAGGGCTCTGAGCCTTCCCAGGTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 90 bp CCACTGCTGGTGGGCTCTGCTGCACAGGCTCCGTCTTCCTCCTCCTaGGAAGAAAAGGCTGGGGTTTCAGGAAACCGTGCGCTCTCAAGA +
Preference number: 1 (lower is better)
Translates to: PLLVGSAAQAPSSSS*EEKAGVSGNRALSR
Trigger: TCTTGAGAGCGCACGGTTTCCTGAAACCCCAGCCTTTTCTTCTCAGGAGGAGGAAGACGGAGCCTGTGCAGCAGAGCCCACCAGCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 90 bp CACTTGTGGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCACTaGCCTGGTCAGCACTGGGTTGAGGCTCTGGGCCGCCTTCACCTT +
Preference number: 1 (lower is better)
Translates to: HLWADLPLESHTVQH*PGQHWVEALGRLHL
Trigger: AAGGTGAAGGCGGCCCAGAGCCTCAACCCAGTGCTGACCAGGGCAGTGCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCCACAAGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 90 bp TTGTGTCAGTGGGAAAACTACTCCTCAGTTTCGGAGAGGCACCCATaGACCTCTCAGAGCAGGTCGCTGTCCCCGGCCTGGAGTGGCCAT +
Preference number: 1 (lower is better)
Translates to: LCQWENYSSVSERHP*TSQSRSLSPAWSGH
Trigger: ATGGCCACTCCAGGCCGGGGACAGCGACCTGCTCTGAGAGGTCCATGGGTGCCTCTCCGAAACTGAGGAGTAGTTTTCCCACTGACACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 90 bp TCAATGCGTGCCTCCCAGTTTGGTGGGAGAGCCTCGTCCACCCTCTaGTACCGGCTAACATCCTGGCGCACTGAAGGTAGTGATCGCAGT +
Preference number: 1 (lower is better)
Translates to: SMRASQFGGRASSTL*YRLTSWRTEGSDRS
Trigger: ACTGCGATCACTACCTTCAGTGCGCCAGGATGTTAGCCGGTACCAGAGGGTGGACGAGGCTCTCCCACCAAACTGGGAGGCACGCATTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 90 bp CTCCATTTGCTGTATGGAGTTAGATCTCTGCAGCACCTGCGGGGCTaGGGGAGCTGTCGGTCGCTGCCACGTCGTGGTTCTGTTTACGTG +
Preference number: 1 (lower is better)
Translates to: LHLLYGVRSLQHLRG*GSCRSLPRRGSVYV
Trigger: CACGTAAACAGAACCACGACGTGGCAGCGACCGACAGCTCCCCCAGCCCCGCAGGTGCTGCAGAGATCTAACTCCATACAGCAAATGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 90 bp GCACTGTCCTCAGAAACTGGCCCATTAGAGCACACCTGGCTGTCGTaGTGGCTCCCTGGCATGTCCTCGTCATCGGAAGGGCTACCTAAG +
Preference number: 1 (lower is better)
Translates to: ALSSETGPLEHTWLS*WLPGMSSSSEGLPK
Trigger: CTTAGGTAGCCCTTCCGATGACGAGGACATGCCAGGGAGCCATCACGACAGCCAGGTGTGCTCTAATGGGCCAGTTTCTGAGGACAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 90 bp TCACTGGGTTCTGTTTCAGAGGACACCTGGGAAGGCTCAGAGCCCTaGTCGAGAGACTCGGTCTCACTGACGGCTCTTCGGCTTCCTCCT +
Preference number: 1 (lower is better)
Translates to: SLGSVSEDTWEGSEP*SRDSVSLTALRLPP
Trigger: AGGAGGAAGCCGAAGAGCCGTCAGTGAGACCGAGTCTCTCGATCAGGGCTCTGAGCCTTCCCAGGTGTCCTCTGAAACAGAACCCAGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 90 bp GGCTTCCTCCTGATGCATCGGAAGTCCCTGTGTCTGCGCCACTTGTaGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCACTGCCCT +
Preference number: 1 (lower is better)
Translates to: GFLLMHRKSLCLRHL*ADLPLESHTVQHCP
Trigger: AGGGCAGTGCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACACAGGGACTTCCGATGCATCAGGAGGAAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 90 bp CTCTGCTGCACAGGCTCCGTCTTCCTCCTCCTGAGAAGAAAAGGCTaGGGTTTCAGGAAACCGTGCGCTCTCAAGAGAGGAGCACCGTGT +
Preference number: 1 (lower is better)
Translates to: LCCTGSVFLLLRRKG*GFRKPCALKRGAPC
Trigger: ACACGGTGCTCCTCTCTTGAGAGCGCACGGTTTCCTGAAACCCCAGCCTTTTCTTCTCAGGAGGAGGAAGACGGAGCCTGTGCAGCAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 90 bp GTAAAAGTTCCTCAGTTTGGCTTCGAAATCCCGCTTGTAAGGGGCTaGAGCCCGGGCATTGGCACGCTGGGTACCTGGCGAGTTCTGAGG +
Preference number: 1 (lower is better)
Translates to: VKVPQFGFEIPLVRG*SPGIGTLGTWRVLR
Trigger: CCTCAGAACTCGCCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAGCCCCTTACAAGCGGGATTTCGAAGCCAAACTGAGGAACTTTTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 90 bp GACTGTATTGAATGTACTGGATGGCCTGGGAAGAACTGGTGGTCCTaGATGTCGAGAATCTTCTCCTACCTCACCCGCACTGTGGCTGCG +
Preference number: 1 (lower is better)
Translates to: DCIECTGWPGKNWWS*MSRIFSYLTRTVAA
Trigger: CGCAGCCACAGTGCGGGTGAGGTAGGAGAAGATTCTCGACATGCAGGACCACCAGTTCTTCCCAGGCCATCCAGTACATTCAATACAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 90 bp GTGGAGGCTTCCTCATTCTCAACAGGGTTGTCCTCCAGCTTTGTCTaGGATGTCAGGCTTCCATCATCAGCTCTGGATGCCCTGCTAAAC +
Preference number: 1 (lower is better)
Translates to: VEASSFSTGLSSSFV*DVRLPSSALDALLN
Trigger: GTTTAGCAGGGCATCCAGAGCTGATGATGGAAGCCTGACATCTCAGACAAAGCTGGAGGACAACCCTGTTGAGAATGAGGAAGCCTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 90 bp CCGTCGGAAATCTGCACTGGCTTGGTGAAAGTCAGCTTCCTCCCCTaGCCCATCAATAGCATTGGTATTTTCCTCAGGCCTCTCATTGGT +
Preference number: 1 (lower is better)
Translates to: PSEICTGLVKVSFLP*PINSIGIFLRPLIG
Trigger: ACCAATGAGAGGCCTGAGGAAAATACCAATGCTATTGATGGGGCAGGGGAGGAAGCTGACTTTCACCAAGCCAGTGCAGATTTCCGACGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 90 bp CCTACTGACTGTATTGAATGTACTGGATGGCCTGGGAAGAACTGGTaGTCCTGCATGTCGAGAATCTTCTCCTACCTCACCCGCACTGTG +
Preference number: 1 (lower is better)
Translates to: PTDCIECTGWPGKNW*SCMSRIFSYLTRTV
Trigger: CACAGTGCGGGTGAGGTAGGAGAAGATTCTCGACATGCAGGACCACCAGTTCTTCCCAGGCCATCCAGTACATTCAATACAGTCAGTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 90 bp TGGCCTACTGACTGTATTGAATGTACTGGATGGCCTGGGAAGAACTaGTGGTCCTGCATGTCGAGAATCTTCTCCTACCTCACCCGCACT +
Preference number: 1 (lower is better)
Translates to: WPTDCIECTGWPGKN*WSCMSRIFSYLTRT
Trigger: AGTGCGGGTGAGGTAGGAGAAGATTCTCGACATGCAGGACCACCAGTTCTTCCCAGGCCATCCAGTACATTCAATACAGTCAGTAGGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 90 bp CATGTCCTGGTACTGTGGCCTACTGACTGTATTGAATGTACTGGATaGCCTGGGAAGAACTGGTGGTCCTGCATGTCGAGAATCTTCTCC +
Preference number: 1 (lower is better)
Translates to: HVLVLWPTDCIECTG*PGKNWWSCMSRIFS
Trigger: GGAGAAGATTCTCGACATGCAGGACCACCAGTTCTTCCCAGGCCATCCAGTACATTCAATACAGTCAGTAGGCCACAGTACCAGGACATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 90 bp TGTCCTCGTCATCGGAAGGGCTACCTAAGTCTCCATTCACAGAATTaGCTCCAAGTATTGTGCCAACAGCTTCTGGAGAGGCATCCGATG +
Preference number: 1 (lower is better)
Translates to: CPRHRKGYLSLHSQN*LQVLCQQLLERHPM
Trigger: CATCGGATGCCTCTCCAGAAGCTGTTGGCACAATACTTGGAGTCAATTCTGTGAATGGAGACTTAGGTAGCCCTTCCGATGACGAGGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 90 bp CTGGAAGATTTTCTGGCTTATCCTCAAAGGAAGCAGCTTCGTGTGTaGAGGCTTCCTCATTCTCAACAGGGTTGTCCTCCAGCTTTGTCT +
Preference number: 1 (lower is better)
Translates to: LEDFLAYPQRKQLRV*RLPHSQQGCPPALS
Trigger: AGACAAAGCTGGAGGACAACCCTGTTGAGAATGAGGAAGCCTCCACACACGAAGCTGCTTCCTTTGAGGATAAGCCAGAAAATCTTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 90 bp CCATTTCTCCACACAGAATCTTCTTGGGCCGTTACTCCCTCGGAGTaGAGCAAATCCTTCATAGGGAATGCTGGATGTGCCTGTAACAAA +
Preference number: 1 (lower is better)
Translates to: PFLHTESSWAVTPSE*SKSFIGNAGCACNK
Trigger: TTTGTTACAGGCACATCCAGCATTCCCTATGAAGGATTTGCTTCACTCCGAGGGAGTAACGGCCCAAGAAGATTCTGTGTGGAGAAATGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 90 bp CTCACCCAAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTaGCAGAGCACTTGTTCCTGGAAAACAACAGCACATAGCTTTATC +
Preference number: 1 (lower is better)
Translates to: LTQILPRGLISSPQM*QSTCSWKTTAHSFI
Trigger: GATAAAGCTATGTGCTGTTGTTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTTGGGTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR TCA 90 bp CAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCTTCTCAGTCTaGAACCAAATTGAAGTATGTTCCTACCCCCACCAGCAAGCCCTA +
Preference number: 1 (lower is better)
Translates to: QTVPSSGSIAFFFSV*NQIEVCSYPHQQAL
Trigger: TAGGGCTTGCTGGTGGGGGTAGGAACATACTTCAATTTGGTTTCAGACTGAGAAGAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR TCA 90 bp AACCAAATTGAAGTATGTTCCTACCCCCACCAGCAAGCCCTAAGATaGTCCATCTACCGTTGTTTTAACTTTCCCTCCACTACACTCCTG +
Preference number: 1 (lower is better)
Translates to: NQIEVCSYPHQQALR*SIYRCFNFPSTTLL
Trigger: CAGGAGTGTAGTGGAGGGAAAGTTAAAACAACGGTAGATGGATCATCTTAGGGCTTGCTGGTGGGGGTAGGAACATACTTCAATTTGGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR CCA 90 bp CTGACAGCTCCTCGGAATGCAGTTACCACTCTGAATCTTGACAGTTaGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTGCT +
Preference number: 1 (lower is better)
Translates to: LTAPRNAVTTLNLDS*SIISIIFLRGGTTA
Trigger: AGCAGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATTCAGAGTGGTAACTGCATTCCGAGGAGCTGTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR TCA 90 bp TTCATCAGGGAGCATAGCTTTCTTCTTCTCAGTCTGAAACCAAATTaGAGTATGTTCCTACCCCCACCAGCAAGCCCTAAGATGATCCAT +
Preference number: 1 (lower is better)
Translates to: FIREHSFLLLSLKPN*SMFLPPPASPKMIH
Trigger: ATGGATCATCTTAGGGCTTGCTGGTGGGGGTAGGAACATACTTCAATTTGGTTTCAGACTGAGAAGAAGAAAGCTATGCTCCCTGATGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR TCA 90 bp AGATGGGTAACCCAGGTCTTGCTGGAACTCGTGATCTTCTTCATCTaGATCAATATGAAGCATGGCATTGAGTCTTGTGTCAGTGGGAAA +
Preference number: 1 (lower is better)
Translates to: RWVTQVLLELVIFFI*INMKHGIESCVSGK
Trigger: TTTCCCACTGACACAAGACTCAATGCCATGCTTCATATTGATTCAGATGAAGAAGATCACGAGTTCCAGCAAGACCTGGGTTACCCATCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 90 bp CTTGTACCCTACAAAGTGCGTGAGGAGCTAAACGGACGATGTACCTaGCAGCACTTTGAAACTATAAAGCACTATGCAAGCATATTCTAC +
Preference number: 1 (lower is better)
Translates to: LVPYKVREELNGRCT*QHFETIKHYASIFY
Trigger: GTAGAATATGCTTGCATAGTGCTTTATAGTTTCAAAGTGCTGTCAGGTACATCGTCCGTTTAGCTCCTCACGCACTTTGTAGGGTACAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR CCA 90 bp GCAGATTTAGACTCTTGTAGCTCCATCGTCAAACAAACATCAAACTaGCACAGAGGGAATGCCAATGATGTGCTTGTTCTCTCATCTAAG +
Preference number: 1 (lower is better)
Translates to: ADLDSCSSIVKQTSN*HRGNANDVLVLSSK
Trigger: CTTAGATGAGAGAACAAGCACATCATTGGCATTCCCTCTGTGCCAGTTTGATGTTTGTTTGACGATGGAGCTACAAGAGTCTAAATCTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR TCA 90 bp CTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACTTGACCAGTATTaGCATACTATTACTTGCCATTGCTTCCCAATAGAAACAGCATTG +
Preference number: 1 (lower is better)
Translates to: LSLCKCILASTLDQY*HTITCHCFPIETAL
Trigger: CAATGCTGTTTCTATTGGGAAGCAATGGCAAGTAATAGTATGTCAATACTGGTCAAGTGTTGAAGCCAGGATGCACTTACACAACGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR TCA 90 bp TTGACTGATGGTTCCTTACCTGCATCAGTAATAGCTGATTCAGTTTaGATCACACAACACGGCTATCCACACTCCTCAGGTTGTAATATC +
Preference number: 1 (lower is better)
Translates to: LTDGSLPASVIADSV*ITQHGYPHSSGCNI
Trigger: GATATTACAACCTGAGGAGTGTGGATAGCCGTGTTGTGTGATTCAAACTGAATCAGCTATTACTGATGCAGGTAAGGAACCATCAGTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR CCA 90 bp ATCAGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTaGCTTCAACACTTGACCAGTATTGACATACTATTACTTGCCATT +
Preference number: 1 (lower is better)
Translates to: ISSLHTLHSRCVSAS*LQHLTSIDILLLAI
Trigger: AATGGCAAGTAATAGTATGTCAATACTGGTCAAGTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCTGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR GCA 90 bp TCGTCAAACAAACATCAAACTGGCACAGAGGGAATGCCAATGATGTaGTTGTTCTCTCATCTAAGAGATGTTCTGCATACATATATGATG +
Preference number: 1 (lower is better)
Translates to: SSNKHQTGTEGMPMM*LFSHLRDVLHTYMM
Trigger: CATCATATATGTATGCAGAACATCTCTTAGATGAGAGAACAAGCACATCATTGGCATTCCCTCTGTGCCAGTTTGATGTTTGTTTGACGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR CCA 90 bp GAGCTGATCATGTATGGGTTCATCTTTGTCTTGGAACATAACAAATaGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTG +
Preference number: 1 (lower is better)
Translates to: ELIMYGFIFVLEHNK*KKFGSQELLIERRL
Trigger: CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATGTTCCAAGACAAAGATGAACCCATACATGATCAGCTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR TCA 90 bp TTATTACTTAGATGCACAGTCCTTGTAGTGGTAGACACGGCACTGTaGAGGAAGTTTGATTTAGAAGCTATTTTCTATTATACTTCTCAA +
Preference number: 1 (lower is better)
Translates to: LLLRCTVLVVVDTAL*RKFDLEAIFYYTSQ
Trigger: TTGAGAAGTATAATAGAAAATAGCTTCTAAATCAAACTTCCTTCACAGTGCCGTGTCTACCACTACAAGGACTGTGCATCTAAGTAATAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR CAA 90 bp TGCCCCTTCACAGGTGCCTTGGGCCTCCCCAGCACTGCCTTCTTCTaGCGGTGGGCTCTCGGCAGCAGCTGCAGCTCCCTCCAGGCTCCC +
Preference number: 2 (lower is better)
Translates to: CPFTGALGLPSTAFF*RWALGSSCSSLQAP
Trigger: GGGAGCCTGGAGGGAGCTGCAGCTGCTGCCGAGAGCCCACCGCAAGAAGAAGGCAGTGCTGGGGAGGCCCAAGGCACCTGTGAAGGGGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CAA 90 bp CTCTTGAGAGCCACACAGTTCAGCACTGCCCTGGTCAGCACTGGGTaGAGGCTCTGGGCCGCCTTCACCTTCCTCTGGGGCTGGGCCTGC +
Preference number: 2 (lower is better)
Translates to: LLRATQFSTALVSTG*RLWAAFTFLWGWAC
Trigger: GCAGGCCCAGCCCCAGAGGAAGGTGAAGGCGGCCCAGAGCCTCAACCCAGTGCTGACCAGGGCAGTGCTGAACTGTGTGGCTCTCAAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR TCA 90 bp TCAATGCGTGCCTCCCAGTTTGGTGGGAGAGCCTCGTCCACCCTCTGGTACCGGGAGACTCGGTCTCACTaGCGGCTCTTCGGCTTCCTC +
Preference number: 2 (lower is better)
Translates to: SMRASQFGGRASSTLWYRETRSH*RLFGFL
Trigger: GAGGAAGCCGAAGAGCCGTCAGTGAGACCGAGTCTC...CCGGTACCAGAGGGTGGACGAGGCTCTCCCACCAAACTGGGAGGCACGCATTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CAA 90 bp GAGCACCGTGTGTCCACAGAGGACAGCTGCGTGGTCACACTCTCATaGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAGGC +
Preference number: 2 (lower is better)
Translates to: EHRVSTEDSCVVTLS*QELSAHSRSLSPSG
Trigger: GCCTGAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGTGTGACCACGCAGCTGTCCTCTGTGGACACACGGTGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR TCA 90 bp TTGAGAACCTCCAGTAGCGCCCTCCTCCTGGGCAGTTGCCCCTTCACAGGTGCCGGAGCTAGTCCTGAATaGATGCTTGGGGGTTCCATC +
Preference number: 2 (lower is better)
Translates to: LRTSSSALLLGSCPFTGAGASPE*MLGGSI
Trigger: GATGGAACCCCCAAGCATTCATTCAGGACTAGCTCC...GGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGGAGGTTCTCAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp GGTCACACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCTGGAGAGGCATCCGATaGCTTGTCGCTCCAGCAGCC +
Preference number: 2 (lower is better)
Translates to: GHTLIAGAVSAFQVTLSLWRGIR*LVAPAA
Trigger: GGCTGCTGGAGCGACAAGCCATCGGATGCCTCTCCA...GAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGTGTGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CAA 90 bp ATCGGAAGTCCCTGTGTCTGCGCCACTTGTGGGCTGATCTACCTCTaGAGAGCCACACAGTTCAGCACTGCCCTGGTCAGCACTGGGTTG +
Preference number: 2 (lower is better)
Translates to: IGSPCVCATCGLIYL*RATQFSTALVSTGL
Trigger: CAACCCAGTGCTGACCAGGGCAGTGCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACACAGGGACTTCCGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CAA 90 bp TTCGGCTTCCTCCTGATGCATCGGAAGTCCCTGTGTCTGCGCCACTaGTGGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCACTGC +
Preference number: 2 (lower is better)
Translates to: FGFLLMHRKSLCLRH*WADLPLESHTVQHC
Trigger: GCAGTGCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACACAGGGACTTCCGATGCATCAGGAGGAAGCCGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR TCA 90 bp ACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAGGCCTCTAGAAGGCAGCTTCTaGACCTGCCTGTCCACAGAG +
Preference number: 2 (lower is better)
Translates to: TLIAGAVSAFQVTLSLRPLEGSF*TCLSTE
Trigger: CTCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAG...AGGCCTGAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCTAGAAGGCAGCTTCTaGACCTGCCTGTCCACAGAG +
Preference number: 2 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDLEGSF*TCLSTE
Trigger: CTCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp CACTGGGCACCTGTACCACAGGTAAAGAACCAGCAGTGCACACGGATTCCTGCGTCATTGAGTGAATCCTaGCGTCCTCTGGGAGGTGAG +
Preference number: 2 (lower is better)
Translates to: HWAPVPQVKNQQCTRIPASLSES*RPLGGE
Trigger: CTCACCTCCCAGAGGACGTCAGGATTCACTCAATGA...CGCAGGAATCCGTGTGCACTGCTGGTTCTTTACCTGTGGTACAGGTGCCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp GGTCACACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCCTCCTCCAAGGAAGATaGGTAACCCAGGTCTTGCTG +
Preference number: 2 (lower is better)
Translates to: GHTLIAGAVSAFQVTLSLLLQGR*VTQVLL
Trigger: CAGCAAGACCTGGGTTACCCATCTTCCTTGGAGGAG...GAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGTGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR TCA 90 bp TGTGTCTGCGCCACTTGTGGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCTCCAGTCCCCAAATGTaGCAGAGCACTTGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: CVCATCGLIYLLRATQFSSSPQM*QSTCSW
Trigger: CCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGA...GCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR TCA 90 bp TCAATGCGTGCCTCCCAGTTTGGTGGGAGAGCCTCGTCCACCCTCTGGTACCGGTCTTGCTGGAACTCGTaGTCTTCTTCATCTGAATCA +
Preference number: 2 (lower is better)
Translates to: SMRASQFGGRASSTLWYRSCWNS*SSSSES
Trigger: TGATTCAGATGAAGAAGATCACGAGTTCCAGCAAGA...CCGGTACCAGAGGGTGGACGAGGCTCTCCCACCAAACTGGGAGGCACGCATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR TCA 90 bp AACCATGTCCTGGTACTGTGGCCTACTGACTGTATTGAATGTACTGGATGGCCTTGGTGGCCGTTGGCTTaGGAACCTCCAGTAGCGCCC +
Preference number: 2 (lower is better)
Translates to: NHVLVLWPTDCIECTGWPWWPLA*EPPVAP
Trigger: GGGCGCTACTGGAGGTTCTCAAGCCAACGGCCACCA...AGGCCATCCAGTACATTCAATACAGTCAGTAGGCCACAGTACCAGGACATGGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR GCA 90 bp CACTGGGCACCTGTACCACAGGTAAAGAACCAGCAGTGCACACGGATTCCTGCGTGGTCACACTCTCATTaGAGGAGCTGTCAGCGCATT +
Preference number: 2 (lower is better)
Translates to: HWAPVPQVKNQQCTRIPAWSHSH*RSCQRI
Trigger: AATGCGCTGACAGCTCCTGCAATGAGAGTGTGACCA...CGCAGGAATCCGTGTGCACTGCTGGTTCTTTACCTGTGGTACAGGTGCCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR GCA 90 bp CAGTGGGAAAACTACTCCTCAGTTTCGGAGAGGCACCCATGGACCTCTCAGAGCCTAGTCCTGAATGAATaGTTGGGGGTTCCATCGGCA +
Preference number: 2 (lower is better)
Translates to: QWENYSSVSERHPWTSQSLVLNE*LGVPSA
Trigger: TGCCGATGGAACCCCCAAGCATTCATTCAGGACTAG...GCTCTGAGAGGTCCATGGGTGCCTCTCCGAAACTGAGGAGTAGTTTTCCCACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp GCTGGGCCTGCAGGTAAGGAGCTCTCTGCAAGCTCTGGAAGATTTTCTGGCTTATGTGCCAACAGCTTCTaGAGAGGCATCCGATGGCTT +
Preference number: 2 (lower is better)
Translates to: AGPAGKELSASSGRFSGLCANSF*RGIRWL
Trigger: AAGCCATCGGATGCCTCTCCAGAAGCTGTTGGCACA...TAAGCCAGAAAATCTTCCAGAGCTTGCAGAGAGCTCCTTACCTGCAGGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp AACCATGTCCTGGTACTGTGGCCTACTGACTGTATTGAATGTACTGGATGGCCTCCTCAGGCCTGGTGCTaGCTTCGCTCACACTCTCTG +
Preference number: 2 (lower is better)
Translates to: NHVLVLWPTDCIECTGWPPQAWC*LRSHSL
Trigger: CAGAGAGTGTGAGCGAAGCCAGCACCAGGCCTGAGG...AGGCCATCCAGTACATTCAATACAGTCAGTAGGCCACAGTACCAGGACATGGTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR TCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTaGCAGAGCACTTGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: LGCSLGIKLTQILPRGLISSPQM*QSTCSW
Trigger: CCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGGGCCTCCCCAGCACTaGCTTCTTCTTGCGGTGGGC +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIGPPQH*LLLAVG
Trigger: GCCCACCGCAAGAAGAAGGCAGTGCTGGGGAGGCCC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR GCA 90 bp GGCAGATCCAGACGGTTAAAACATGTATGCGCTCTGGGAAGAGCAGTGATTTTCCACTTGTGGGTCTACTaGTCTGAAGTGGGAGCCGGG +
Preference number: 2 (lower is better)
Translates to: GRSRRLKHVCALGRAVIFHLWVY*SEVGAG
Trigger: CCCGGCTCCCACTTCAGAGCAGTAGACCCACAAGTG...GAAAATCACTGCTCTTCCCAGAGCGCATACATGTTTTAACCGTCTGGATCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CAA 90 bp TCCTCTGTGTCTATTTCCAGAGTGGAGCTAGTCCTGAATGAATGCTaGGGGGTTCCATCGGCAGCACTGTCCTCAGAAACTGGCCCATTA +
Preference number: 2 (lower is better)
Translates to: SSVSISRVELVLNEC*GVPSAALSSETGPL
Trigger: TAATGGGCCAGTTTCTGAGGACAGTGCTGCCGATGGAACCCCCAAGCATTCATTCAGGACTAGCTCCACTCTGGAAATAGACACAGAGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR TCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGAGGTGGAGGTTGCAGTaGGCTCATGTGCCACTGCAC +
Preference number: 2 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLRWRLQ*AHVPLH
Trigger: GTGCAGTGGCACATGAGCTCACTGCAACCTCCACCT...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGGGCGGGCGGATCGCTTaGGCTCAAGAGTTTGAGACG +
Preference number: 2 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEGGRIA*AQEFET
Trigger: CGTCTCAAACTCTTGAGCTCAAGCGATCCGCCCGCC...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACACACCTGGCTGTCGTaGTGGCTCCCTGGCATGTCC +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIHTWLS*WLPGMS
Trigger: GGACATGCCAGGGAGCCATCACGACAGCCAGGTGTG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR TCA 90 bp GGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCACTGCCCTGGTCAGCACTCATCTAAGTAATCATTaGGTGAATCCTGACGTCCTC +
Preference number: 2 (lower is better)
Translates to: GLIYLLRATQFSTALVSTHLSNH*VNPDVL
Trigger: GAGGACGTCAGGATTCACTCAATGATTACTTAGATG...AGTGCTGACCAGGGCAGTGCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR TCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCTAGAAGGCAGCTTCTaGACCTGCCTGTCCACAGAG +
Preference number: 2 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVLEGSF*TCLSTE
Trigger: CTCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR GCA 90 bp ACCTGTACCACAGGTAAAGAACCAGCAGTGCACACGGATTCCTGCGACCCTTCGGAATATTTCTCTCGGTaGCAAATTGGATTGGTGGTG +
Preference number: 2 (lower is better)
Translates to: TCTTGKEPAVHTDSCDPSEYFSR*QIGLVV
Trigger: CACCACCAATCCAATTTGGCACCGAGAGAAATATTC...CGAAGGGTCGCAGGAATCCGTGTGCACTGCTGGTTCTTTACCTGTGGTACAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCTCCCTCAGGCCTGGTaGTGGCTTCGCTCACACTCT +
Preference number: 2 (lower is better)
Translates to: THRLANHMSIQCFYDPQFLPQAW*WLRSHS
Trigger: AGAGTGTGAGCGAAGCCAGCACCAGGCCTGAGGGAG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCTCCTCCTGGGCAGTTaGCCCTTCACAGGTGCCTTG +
Preference number: 2 (lower is better)
Translates to: THRLANHMSIQCFYDPQFLLLGS*PFTGAL
Trigger: CAAGGCACCTGTGAAGGGGCAACTGCCCAGGAGGAG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTCGCTGTCCCCGGCCTaGAGTGGCCATTGTGTTCGA +
Preference number: 2 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWSLSPA*SGHCVR
Trigger: TCGAACACAATGGCCACTCCAGGCCGGGGACAGCGA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp AACCATGTCCTGGTACTGTGGCCTACTGACTGTATTGAATGTACTGGATGGCCTTCACACTCTCTGTCCTaGCAGGATCACTGGGTTCTG +
Preference number: 2 (lower is better)
Translates to: NHVLVLWPTDCIECTGWPSHSLS*QDHWVL
Trigger: CAGAACCCAGTGATCCTGCCAGGACAGAGAGTGTGA...AGGCCATCCAGTACATTCAATACAGTCAGTAGGCCACAGTACCAGGACATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CAA 90 bp ATGTCCTCGTCATCGGAAGGGCTACCTAAGTCTCCATTCACAGAATaGACTCCAAGTATTGTGCCAACAGCTTCTGGAGAGGCATCCGAT +
Preference number: 2 (lower is better)
Translates to: MSSSSEGLPKSPFTE*TPSIVPTASGEASD
Trigger: ATCGGATGCCTCTCCAGAAGCTGTTGGCACAATACTTGGAGTCAATTCTGTGAATGGAGACTTAGGTAGCCCTTCCGATGACGAGGACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACAAGGAAGCATCCTCTTaGAACTTCCAATGTTCAATC +
Preference number: 2 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDKEASS*NFQCSI
Trigger: GATTGAACATTGGAAGTTTCAAGAGGATGCTTCCTT...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCACGGTCATCCTTCCTaGCAGCTCCTCGGAATGCAG +
Preference number: 2 (lower is better)
Translates to: THRLANHMSIQCFYDPQFHGHPS*QLLGMQ
Trigger: CTGCATTCCGAGGAGCTGTCAGGAAGGATGACCGTG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR GCA 90 bp AGTAGCTGGGGTGGAGTAAGGCATGTGGAGGCACATACGACATTATCTCTTCTTGATTGGGCCAAATGCTaGCAGTTTGGCTTGAACCAC +
Preference number: 2 (lower is better)
Translates to: SSWGGVRHVEAHTTLSLLDWAKC*QFGLNH
Trigger: GTGGTTCAAGCCAAACTGGCAGCATTTGGCCCAATC...AAGAAGAGATAATGTCGTATGTGCCTCCACATGCCTTACTCCACCCCAGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR GCA 90 bp CACTGGGCACCTGTACCACAGGTAAAGAACCAGCAGTGCACACGGATTCCTGCGTACACACATACCACTTaGATATACATTGTCACAGAC +
Preference number: 2 (lower is better)
Translates to: HWAPVPQVKNQQCTRIPAYTHTT*IYIVTD
Trigger: GTCTGTGACAATGTATATGCAAGTGGTATGTGTGTA...CGCAGGAATCCGTGTGCACTGCTGGTTCTTTACCTGTGGTACAGGTGCCCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR GCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACGCAACCTTTATCTGCTaGTTGGAGAATGCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHATFIC*LENASP
Trigger: AGGGCTGGCATTCTCCAAGCAGCAGATAAAGGTTGC...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR GCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGGAGCTCATGTGCCACTaGACTCCAGCCTGGATGACA +
Preference number: 2 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEELMCH*TPAWMT
Trigger: TGTCATCCAGGCTGGAGTGCAGTGGCACATGAGCTC...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACTGGGAGGTGGAGGTTaGAGTGAGCTCATGTGCCAC +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNILGGGG*SELMCH
Trigger: GTGGCACATGAGCTCACTGCAACCTCCACCTCCCAG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGTCCCCGGCCTGGAGTaGCCATTGTGTTCGATAGCA +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIVPGLE*PLCSIA
Trigger: TGCTATCGAACACAATGGCCACTCCAGGCCGGGGAC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTGCCCTGGTCAGCACTaGGTTGAGGCTCTGGGCCGC +
Preference number: 2 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGCPGQH*VEALGR
Trigger: GCGGCCCAGAGCCTCAACCCAGTGCTGACCAGGGCA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp AGTAGCTGGGGTGGAGTAAGGCATGTGGAGGCACATACGACATTATCTCTTCTTTCTACTGCTCTGAAGTaGGAGCCGGGGATCAATGAA +
Preference number: 2 (lower is better)
Translates to: SSWGGVRHVEAHTTLSLLSTALK*EPGINE
Trigger: TTCATTGATCCCCGGCTCCCACTTCAGAGCAGTAGA...AAGAAGAGATAATGTCGTATGTGCCTCCACATGCCTTACTCCACCCCAGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR TCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCCTAGAAGGCAGCTTCTaGACCTGCCTGTCCACAGAG +
Preference number: 2 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFLEGSF*TCLSTE
Trigger: CTCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAG...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGACCCTACAAAGTGCGTaGGGAGCTAAACGGACGATG +
Preference number: 2 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEETLQSA*GAKRTM
Trigger: CATCGTCCGTTTAGCTCCTCACGCACTTTGTAGGGT...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGTTGAGCTCAAGAGTTTaGGACGTGCCTGGGCCTTGT +
Preference number: 2 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEELSSRV*DVPGPC
Trigger: ACAAGGCCCAGGCACGTCTCAAACTCTTGAGCTCAA...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTGGTCAGCACTGGGTTaGGGCTCTGGGCCGCCTTCA +
Preference number: 2 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGWSALG*GSGPPS
Trigger: TGAAGGCGGCCCAGAGCCTCAACCCAGTGCTGACCA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR TCA 90 bp AGTAGCTGGGGTGGAGTAAGGCATGTGGAGGCACATACGACATTATCTCTTCTTGATCTTCTCCCTGAGTaGGTGATTCCTGGTAAGATC +
Preference number: 2 (lower is better)
Translates to: SSWGGVRHVEAHTTLSLLDLLPE*VIPGKI
Trigger: GATCTTACCAGGAATCACTCACTCAGGGAGAAGATC...AAGAAGAGATAATGTCGTATGTGCCTCCACATGCCTTACTCCACCCCAGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR GCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGGCAACCTTTATCTGCTaGTTGGAGAATGCCAGCCCT +
Preference number: 2 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLATFIC*LENASP
Trigger: AGGGCTGGCATTCTCCAAGCAGCAGATAAAGGTTGC...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CCA 90 bp AACCATGTCCTGGTACTGTGGCCTACTGACTGTATTGAATGTACTGGATGGCCTGCCTCTCATTGGTCATaGTTCTGCGGATACTCTGAT +
Preference number: 2 (lower is better)
Translates to: NHVLVLWPTDCIECTGWPASHWS*FCGYSD
Trigger: ATCAGAGTATCCGCAGAACCATGACCAATGAGAGGC...AGGCCATCCAGTACATTCAATACAGTCAGTAGGCCACAGTACCAGGACATGGTT
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp AGTAGCTGGGGTGGAGTAAGGCATGTGGAGGCACATACGACATTATCTCTTCTTGTCGGAAATCTGCACTaGCTTGGTGAAAGTCAGCTT +
Preference number: 2 (lower is better)
Translates to: SSWGGVRHVEAHTTLSLLVGNLH*LGESQL
Trigger: AAGCTGACTTTCACCAAGCCAGTGCAGATTTCCGAC...AAGAAGAGATAATGTCGTATGTGCCTCCACATGCCTTACTCCACCCCAGCTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR TCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCAAGGAAGCATCCTCTTaGAACTTCCAATGTTCAATC +
Preference number: 2 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIKEASS*NFQCSI
Trigger: GATTGAACATTGGAAGTTTCAAGAGGATGCTTCCTT...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATCCAGTCCCCAAATGTaGCAGAGCACTTGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNISSPQM*QSTCSW
Trigger: CCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp AACCATGTCCTGGTACTGTGGCCTACTGACTGTATTGAATGTACTGGATGGCCTAATGCCTTGCCCTGGTaGTCATGTTTCATTTCCCAT +
Preference number: 2 (lower is better)
Translates to: NHVLVLWPTDCIECTGWPNALPW*SCFISH
Trigger: ATGGGAAATGAAACATGATCACCAGGGCAAGGCATT...AGGCCATCCAGTACATTCAATACAGTCAGTAGGCCACAGTACCAGGACATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR GCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGGAGATTGGGCCAAATaGTGCCAGTTTGGCTTGAAC +
Preference number: 2 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNGDWAK*CQFGLN
Trigger: GTTCAAGCCAAACTGGCAGCATTTGGCCCAATCTCC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR GCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCCCAAGGTGGGAGGACTaGTTGAGCTCAGGAGTTCAA +
Preference number: 2 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFPRWED*LSSGVQ
Trigger: TTGAACTCCTGAGCTCAAGCAGTCCTCCCACCTTGG...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCTCCCGTCGGAAATCTaGACTGGCTTGGTGAAAGTC +
Preference number: 2 (lower is better)
Translates to: THRLANHMSIQCFYDPQFLPSEI*TGLVKV
Trigger: GACTTTCACCAAGCCAGTGCAGATTTCCGACGGGAG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGGTTGGGTTGTTCCCTaGGCATCAAGCTCACCCAAA +
Preference number: 2 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWGWVVP*ASSSPK
Trigger: TTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGGTTGGGTTGTTCCCTaGGCATCAAGCTCACCCAAA +
Preference number: 2 (lower is better)
Translates to: THRLANHMSIQCFYDPQFGWVVP*ASSSPK
Trigger: TTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGGTTGGGTTGTTCCCTaGGCATCAAGCTCACCCAAA +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIGWVVP*ASSSPK
Trigger: TTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCTATATTCTTGCGGGGTaGCACAACTGCTGGGCTCCT +
Preference number: 2 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFYILAG*HNCWAP
Trigger: AGGAGCCCAGCAGTTGTGCCACCCCGCAAGAATATA...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTAATCCTGACGTCCTCTaGGAGGTGAGGTCCTTGAAG +
Preference number: 2 (lower is better)
Translates to: THRLANHMSIQCFYDPQFNPDVL*EVRSLK
Trigger: CTTCAAGGACCTCACCTCCCAGAGGACGTCAGGATT...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTTCGGAGAGGCACCCATaGACCTCTCAGAGCAGGTCG +
Preference number: 2 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPSERHP*TSQSRS
Trigger: CGACCTGCTCTGAGAGGTCCATGGGTGCCTCTCCGA...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR TCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACGTAGACACGGCACTGTaGAGGAAGTTTGATTTAGAA +
Preference number: 2 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHVDTAL*RKFDLE
Trigger: TTCTAAATCAAACTTCCTTCACAGTGCCGTGTCTAC...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGTACTCTACTACACTGTaGGCTGAGCTTTTCAAAGGC +
Preference number: 2 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLYSTTL*AELFKG
Trigger: GCCTTTGAAAAGCTCAGCTCACAGTGTAGTAGAGTA...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR GCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCGATTGGGCCAAATGCTaGCAGTTTGGCTTGAACCAC +
Preference number: 2 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFDWAKC*QFGLNH
Trigger: GTGGTTCAAGCCAAACTGGCAGCATTTGGCCCAATC...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGGAGATTGGGCCAAATaGTGCCAGTTTGGCTTGAAC +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIGDWAK*CQFGLN
Trigger: GTTCAAGCCAAACTGGCAGCATTTGGCCCAATCTCC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR GCA 90 bp GGCAGATCCAGACGGTTAAAACATGTATGCGCTCTGGGAAGAGCAGTGATTTTCCATGATGCCCGAGTATaGATGGAACATGAAAATGGA +
Preference number: 2 (lower is better)
Translates to: GRSRRLKHVCALGRAVIFHDARV*MEHENG
Trigger: TCCATTTTCATGTTCCATGCATACTCGGGCATCATG...GAAAATCACTGCTCTTCCCAGAGCGCATACATGTTTTAACCGTCTGGATCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR GCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCAATGCAACCTTTATCTaGTGCTTGGAGAATGCCAGC +
Preference number: 2 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCNATFI*CLENAS
Trigger: GCTGGCATTCTCCAAGCAGCAGATAAAGGTTGCATT...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR GCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCCTCTCGTTGTGTAAGTaGATCCTGGCTTCAACACTT +
Preference number: 2 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCLSLCK*ILASTL
Trigger: AAGTGTTGAAGCCAGGATGCACTTACACAACGAGAG...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR GCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTGAGCTCATGTGCCACTaGACTCCAGCCTGGATGACA +
Preference number: 2 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTELMCH*TPAWMT
Trigger: TGTCATCCAGGCTGGAGTGCAGTGGCACATGAGCTC...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATCAAATGCTGCCAGTTTaGCTTGAACCACGTTCAAGG +
Preference number: 2 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNQMLPV*LEPRSR
Trigger: CCTTGAACGTGGTTCAAGCCAAACTGGCAGCATTTG...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR CAA 90 bp AAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTaGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGA +
Preference number: 2 (lower is better)
Translates to: KWKKFGSQELLIERR*GCSLGIKLTQILPR
Trigger: TCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR CAA 90 bp GTCTTGGAACATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTaGATTGAAAGACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACC +
Preference number: 2 (lower is better)
Translates to: VLEHNKWKKFGSQEL*IERRLGCSLGIKLT
Trigger: GGTGAGCTTGATGCCCAGGGAACAACCCAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATGTTCCAAGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCTAGAAGGCAGCTTCTaGACCTGCCTGTCCACAGAG +
Preference number: 2 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPLEGSF*TCLSTE
Trigger: CTCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGTCAAGAACTGTTGATTaGAAGACGGTTGGGTTGTTC +
Preference number: 2 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLSRTVD*KTVGLF
Trigger: GAACAACCCAACCGTCTTTCAATCAACAGTTCTTGA...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGCAGTCAAGAACTGTTaGTTGAAAGACGGTTGGGTT +
Preference number: 2 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNAVKNC*LKDGWV
Trigger: AACCCAACCGTCTTTCAATCAACAGTTCTTGACTGC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACGTTTCAAGATTCTCCTaGGTCCCTAAAAATTACCGT +
Preference number: 2 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHVSRFS*VPKNYR
Trigger: ACGGTAATTTTTAGGGACTCAGGAGAATCTTGAAAC...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCGCCCTTTTGTTTCCTTaGGAGTGCTTAAAAGGATAC +
Preference number: 2 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCALLFP*ECLKGY
Trigger: GTATCCTTTTAAGCACTCTCAAGGAAACAAAAGGGC...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGTACTACACTGTGAGCTaGGCTTTTCAAAGGCAGATT +
Preference number: 2 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLYYTVS*AFQRQI
Trigger: AATCTGCCTTTGAAAAGCTCAGCTCACAGTGTAGTA...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGCCTGGCTTCAACACTTaGCCAGTATTGACATACTAT +
Preference number: 2 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLPGFNT*PVLTYY
Trigger: ATAGTATGTCAATACTGGTCAAGTGTTGAAGCCAGG...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp GTCCAAAAGTACTGGTTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATGGTGTTCGCGAACATGTTaGGGAATCCCACAAGGTCGC +
Preference number: 2 (lower is better)
Translates to: VQKYWFLQLLSTVFHKAWCSRTC*GIPQGR
Trigger: GCGACCTTGTGGGATTCCTCAACATGTTCGCGAACA...CCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGTACTTTTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR GCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCACACAGTTCAGCACTaGCCTGGTCAGCACTGGGTT +
Preference number: 2 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGHTVQH*PGQHWV
Trigger: AACCCAGTGCTGACCAGGGCAGTGCTGAACTGTGTG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACAAATGCTGCCAGTTTaGCTTGAACCACGTTCAAGG +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIQMLPV*LEPRSR
Trigger: CCTTGAACGTGGTTCAAGCCAAACTGGCAGCATTTG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGCAACTGCCAGCATGGTaGCTCACACCTATAATTACT +
Preference number: 2 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEQLPAW*LTPIIT
Trigger: AGTAATTATAGGTGTGAGCCACCATGCTGGCAGTTG...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTCACTGCACTCCAGCATaGGTGACAGCCAGACCTTAT +
Preference number: 2 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTHCTPA*VTARPY
Trigger: ATAAGGTCTGGCTGTCACCCATGCTGGAGTGCAGTG...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CCA 90 bp GTCCAAAAGTACTGGTTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATGGGTCGCTGCCACGTCGTaGTTCTGTTTACGTGATCCA +
Preference number: 2 (lower is better)
Translates to: VQKYWFLQLLSTVFHKAWVAATS*FCLRDP
Trigger: TGGATCACGTAAACAGAACCACGACGTGGCAGCGAC...CCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGTACTTTTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp GTCCAAAAGTACTGGTTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATGGGTGGTGCGGGAGTTGTaGTCCACAAAGAATGCCTTG +
Preference number: 2 (lower is better)
Translates to: VQKYWFLQLLSTVFHKAWVVREL*STKNAL
Trigger: CAAGGCATTCTTTGTGGACCACAACTCCCGCACCAC...CCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGTACTTTTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR TCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTAAGGAAGCATCCTCTTaGAACTTCCAATGTTCAATC +
Preference number: 2 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVKEASS*NFQCSI
Trigger: GATTGAACATTGGAAGTTTCAAGAGGATGCTTCCTT...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTCCAGTCCCCAAATGTaGCAGAGCACTTGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGSSPQM*QSTCSW
Trigger: CCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTCCAGTCCCCAAATGTaGCAGAGCACTTGTTCCTGG +
Preference number: 2 (lower is better)
Translates to: HNKWKKFGSQELLIERRLSSPQM*QSTCSW
Trigger: CCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGTCAAGAACTGTTGATTaGAAGACGGTTGGGTTGTTC +
Preference number: 2 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEESRTVD*KTVGLF
Trigger: GAACAACCCAACCGTCTTTCAATCAACAGTTCTTGA...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTCAAGAACTGTTGATTaGAAGACGGTTGGGTTGTTC +
Preference number: 2 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNSRTVD*KTVGLF
Trigger: GAACAACCCAACCGTCTTTCAATCAACAGTTCTTGA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGGATACATATTAGCATaGTGCCCGAGTATGCATGGA +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIGYILA*CPSMHG
Trigger: TCCATGCATACTCGGGCATCATGCTAATATGTATCC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR GCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGAGCGGAAACCTATGGTaGACACCATGCAGGCACTCA +
Preference number: 2 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGSGNLW*TPCRHS
Trigger: TGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCT...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR GCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGGGAATGCCAATGATGTaGTTGTTCTCTCATCTAAGA +
Preference number: 2 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLGMPMM*LFSHLR
Trigger: TCTTAGATGAGAGAACAAGCACATCATTGGCATTCC...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCTCTCGTTGTGTAAGTaGATCCTGGCTTCAACACTT +
Preference number: 2 (lower is better)
Translates to: THRLANHMSIQCFYDPQFLSLCK*ILASTL
Trigger: AAGTGTTGAAGCCAGGATGCACTTACACAACGAGAG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR GCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGTCAAAATCTTTGAGTTaGTCCTTCACAGATCAGCTC +
Preference number: 2 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLSKSLS*SFTDQL
Trigger: GAGCTGATCTGTGAAGGAGCAACTCAAAGATTTTGA...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGTAAAGAACCAGCAGTaGACACGGATTCCTGCGACC +
Preference number: 2 (lower is better)
Translates to: HNKWKKFGSQELLIERRLVKNQQ*TRIPAT
Trigger: GGTCGCAGGAATCCGTGTGCACTGCTGGTTCTTTAC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATTATCATCCTTTCAGTaGGCAGTAGCTGGCCTTAAG +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNILSSFQ*AVAGLK
Trigger: CTTAAGGCCAGCTACTGCCCACTGAAAGGATGATAA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGCTCTCTGCAAGCTCTaGAAGATTTTCTGGCTTATC +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIALCKL*KIFWLI
Trigger: GATAAGCCAGAAAATCTTCCAGAGCTTGCAGAGAGC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGATGTACTGGATGGCCTaGGAAGAACTGGTGGTCCTG +
Preference number: 2 (lower is better)
Translates to: HNKWKKFGSQELLIERRLMYWMA*EELVVL
Trigger: CAGGACCACCAGTTCTTCCCAGGCCATCCAGTACAT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATCAAGAACTGTTGATTaGAAGACGGTTGGGTTGTTC +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNISRTVD*KTVGLF
Trigger: GAACAACCCAACCGTCTTTCAATCAACAGTTCTTGA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAAAATTACCGTGGAGCTaGTCATGTATGGGTTCATCT +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIKLPWS*SCMGSS
Trigger: AGATGAACCCATACATGATCAGCTCCACGGTAATTT...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGCCCTTTTGTTTCCTTaGGAGTGCTTAAAAGGATAC +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIALLFP*ECLKGY
Trigger: GTATCCTTTTAAGCACTCTCAAGGAAACAAAAGGGC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGTAGACACGGCACTGTaGAGGAAGTTTGATTTAGAA +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIVDTAL*RKFDLE
Trigger: TTCTAAATCAAACTTCCTTCACAGTGCCGTGTCTAC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp GTCCAAAAGTACTGGTTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATGGCAAGGATCCTACCACTaGATCGGAACCATTCATGGT +
Preference number: 2 (lower is better)
Translates to: VQKYWFLQLLSTVFHKAWQGSYH*IGTIHG
Trigger: ACCATGAATGGTTCCGATTCAGTGGTAGGATCCTTG...CCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGTACTTTTGGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGGAGATTGGGCCAAATaGTGCCAGTTTGGCTTGAAC +
Preference number: 2 (lower is better)
Translates to: HNKWKKFGSQELLIERRLGDWAK*CQFGLN
Trigger: GTTCAAGCCAAACTGGCAGCATTTGGCCCAATCTCC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR GCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATAGCGGAAACCTATGGTaGACACCATGCAGGCACTCA +
Preference number: 2 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHSGNLW*TPCRHS
Trigger: TGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCT...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR GCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCTACACACATACCACTTaGATATACATTGTCACAGAC +
Preference number: 2 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCYTHTT*IYIVTD
Trigger: GTCTGTGACAATGTATATGCAAGTGGTATGTGTGTA...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR GCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCCATGATGCCCGAGTATaGATGGAACATGAAAATGGA +
Preference number: 2 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFHDARV*MEHENG
Trigger: TCCATTTTCATGTTCCATGCATACTCGGGCATCATG...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCATGATGCCCGAGTATaGATGGAACATGAAAATGGA +
Preference number: 2 (lower is better)
Translates to: THRLANHMSIQCFYDPQFHDARV*MEHENG
Trigger: TCCATTTTCATGTTCCATGCATACTCGGGCATCATG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATGTAAACCCATAGGCTaGCAAACCATATGTCAATCC +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNICKPIG*QTICQS
Trigger: GGATTGACATATGGTTTGCCAGCCTATGGGTTTACA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTGTAAACCCATAGGCTaGCAAACCATATGTCAATCC +
Preference number: 2 (lower is better)
Translates to: THRLANHMSIQCFYDPQFCKPIG*QTICQS
Trigger: GGATTGACATATGGTTTGCCAGCCTATGGGTTTACA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCATTGAATCTCCCAGATaGAAAAAGCTGTTCTCTTCT +
Preference number: 2 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCIESPR*KKLFSS
Trigger: AGAAGAGAACAGCTTTTTCCATCTGGGAGATTCAAT...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCAAGATGGAAGTAAAATaGCTAAGGTCCAGAGTGCTG +
Preference number: 2 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFKMEVK*LRSRVL
Trigger: CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTT...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTAAGGAAGCATCCTCTTaGAACTTCCAATGTTCAATC +
Preference number: 2 (lower is better)
Translates to: THRLANHMSIQCFYDPQFKEASS*NFQCSI
Trigger: GATTGAACATTGGAAGTTTCAAGAGGATGCTTCCTT...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGTTTCAAGATTCTCCTaGGTCCCTAAAAATTACCGT +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIVSRFS*VPKNYR
Trigger: ACGGTAATTTTTAGGGACTCAGGAGAATCTTGAAAC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCGTTTCAAGATTCTCCTaGGTCCCTAAAAATTACCGT +
Preference number: 2 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFVSRFS*VPKNYR
Trigger: ACGGTAATTTTTAGGGACTCAGGAGAATCTTGAAAC...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGCTGTGTACTTTTTCCTaGTATGCTGTGATTAATTGC +
Preference number: 2 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEELCTFS*YAVINC
Trigger: GCAATTAATCACAGCATATCAGGAAAAAGTACACAG...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTGGGATTTTTCACACTaGAAACCAATGGTGCATTGT +
Preference number: 2 (lower is better)
Translates to: THRLANHMSIQCFYDPQFWDFSH*KPMVHC
Trigger: ACAATGCACCATTGGTTTTCAGTGTGAAAAATCCCA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCTCTTGGAAACCTCACTaGATGTGGAATATACTGGTA +
Preference number: 2 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFSWKPH*MWNILV
Trigger: TACCAGTATATTCCACATTCAGTGAGGTTTCCAAGA...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR GCA 90 bp GTCCAAAAGTACTGGTTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATGGCCACAAAGAATGCCTTaGCCTGGTGATCATGTTTCA +
Preference number: 2 (lower is better)
Translates to: VQKYWFLQLLSTVFHKAWPQRMP*PGDHVS
Trigger: TGAAACATGATCACCAGGGCAAGGCATTCTTTGTGG...CCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGTACTTTTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCAAATGCTGCCAGTTTaGCTTGAACCACGTTCAAGG +
Preference number: 2 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPQMLPV*LEPRSR
Trigger: CCTTGAACGTGGTTCAAGCCAAACTGGCAGCATTTG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTCTCAAAGAAATGTTTaGGCAATGCCTGTAAACCCA +
Preference number: 2 (lower is better)
Translates to: THRLANHMSIQCFYDPQFSQRNV*AMPVNP
Trigger: TGGGTTTACAGGCATTGCCCAAACATTTCTTTGAGA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CCA 90 bp GCTCCTGTAGAATTTCAAAGATATTGGGTTGACGTAGAAATGCAACAATCTTGTGCCTCTGGACTGGAATaGTTAGTTTCCCCAGAAAAC +
Preference number: 2 (lower is better)
Translates to: APVEFQRYWVDVEMQQSCASGLE*LVSPEN
Trigger: GTTTTCTGGGGAAACTAACCATTCCAGTCCAGAGGC...ACAAGATTGTTGCATTTCTACGTCAACCCAATATCTTTGAAATTCTACAGGAGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp GCTCCTGTAGAATTTCAAAGATATTGGGTTGACGTAGAAATGCAACAATCTTGTAAGCAGCTTCGTGTGTaGAGGCTTCCTCATTCTCAA +
Preference number: 2 (lower is better)
Translates to: APVEFQRYWVDVEMQQSCKQLRV*RLPHSQ
Trigger: TTGAGAATGAGGAAGCCTCCACACACGAAGCTGCTT...ACAAGATTGTTGCATTTCTACGTCAACCCAATATCTTTGAAATTCTACAGGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp GCTCCTGTAGAATTTCAAAGATATTGGGTTGACGTAGAAATGCAACAATCTTGTATTGAATGTACTGGATaGCCTGGGAAGAACTGGTGG +
Preference number: 2 (lower is better)
Translates to: APVEFQRYWVDVEMQQSCIECTG*PGKNWW
Trigger: CCACCAGTTCTTCCCAGGCCATCCAGTACATTCAAT...ACAAGATTGTTGCATTTCTACGTCAACCCAATATCTTTGAAATTCTACAGGAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGAAACAGATACCAGCCTaGCATCCACCACCTCATAGA +
Preference number: 2 (lower is better)
Translates to: HNKWKKFGSQELLIERRLKQIPA*HPPPHR
Trigger: TCTATGAGGTGGTGGATGCCAGGCTGGTATCTGTTT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCAAGTCCAAAAGTACTaGTTTCTTCAACTGCTGTCA +
Preference number: 2 (lower is better)
Translates to: THRLANHMSIQCFYDPQFQVQKY*FLQLLS
Trigger: TGACAGCAGTTGAAGAAACCAGTACTTTTGGACTTG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CAA 90 bp CACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATATTGACTaGGTTTCATTTTCACTCATGTCCCATGAAAGCGGAAACCTATGG +
Preference number: 2 (lower is better)
Translates to: HRPSYCKSVKVPHID*VSFSLMSHESGNLW
Trigger: CCATAGGTTTCCGCTTTCATGGGACATGAGTGAAAATGAAACCAAGTCAATATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGCAGTCAAGAACTGTTaGTTGAAAGACGGTTGGGTT +
Preference number: 2 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGAVKNC*LKDGWV
Trigger: AACCCAACCGTCTTTCAATCAACAGTTCTTGACTGC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACTGTGTACTTTTTCCTaGTATGCTGTGATTAATTGC +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNILCTFS*YAVINC
Trigger: GCAATTAATCACAGCATATCAGGAAAAAGTACACAG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTGTAGACACGGCACTGTaGAGGAAGTTTGATTTAGAA +
Preference number: 2 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTVDTAL*RKFDLE
Trigger: TTCTAAATCAAACTTCCTTCACAGTGCCGTGTCTAC...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCGTGACCATACTTCTTTaGCCAAGATCCATTCATTTT +
Preference number: 2 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFVTILL*PRSIHF
Trigger: AAAATGAATGGATCTTGGTCAAAGAAGTATGGTCAC...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACACAGACCATCTTATTaGAAATCTGTAAAGGTACCT +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIHRPSY*KSVKVP
Trigger: AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR GCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCACAGACCATCTTATTaGAAATCTGTAAAGGTACCT +
Preference number: 2 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWHRPSY*KSVKVP
Trigger: AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTACACACATACCACTTaGATATACATTGTCACAGAC +
Preference number: 2 (lower is better)
Translates to: THRLANHMSIQCFYDPQFYTHTT*IYIVTD
Trigger: GTCTGTGACAATGTATATGCAAGTGGTATGTGTGTA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CCA 90 bp GTCCAAAAGTACTGGTTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATGGGGAGCTGATCATGTATaGGTTCATCTTTGTCTTGGA +
Preference number: 2 (lower is better)
Translates to: VQKYWFLQLLSTVFHKAWGADHV*VHLCLG
Trigger: TCCAAGACAAAGATGAACCCATACATGATCAGCTCC...CCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGTACTTTTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAATGTCCCTTCACCTTTaGTACATTCAGTGCAAAATA +
Preference number: 2 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIMSLHL*YIQCKI
Trigger: TATTTTGCACTGAATGTACCAAAGGTGAAGGGACAT...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTTCTTGGAAACCTCACTaGATGTGGAATATACTGGTA +
Preference number: 2 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTSWKPH*MWNILV
Trigger: TACCAGTATATTCCACATTCAGTGAGGTTTCCAAGA...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCTCCATTCACAGAATTaGCTCCAAGTATTGTGCCAA +
Preference number: 2 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPLHSQN*LQVLCQ
Trigger: TTGGCACAATACTTGGAGTCAATTCTGTGAATGGAG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR GCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTGGAATGCCAATGATGTaGTTGTTCTCTCATCTAAGA +
Preference number: 2 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTGMPMM*LFSHLR
Trigger: TCTTAGATGAGAGAACAAGCACATCATTGGCATTCC...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCAAATGGAAAAAGTTTaGCAGTCAAGAACTGTTGAT +
Preference number: 2 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWQMEKV*QSRTVD
Trigger: ATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGGAGCTGATCATGTATaGGTTCATCTTTGTCTTGGA +
Preference number: 2 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGGADHV*VHLCLG
Trigger: TCCAAGACAAAGATGAACCCATACATGATCAGCTCC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTGTAAACCCATAGGCTaGCAAACCATATGTCAATCC +
Preference number: 2 (lower is better)
Translates to: HNKWKKFGSQELLIERRLCKPIG*QTICQS
Trigger: GGATTGACATATGGTTTGCCAGCCTATGGGTTTACA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATAAATTACCGTGGAGCTaGTCATGTATGGGTTCATCT +
Preference number: 2 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHKLPWS*SCMGSS
Trigger: AGATGAACCCATACATGATCAGCTCCACGGTAATTT...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGTTTCAAGATTCTCCTaGGTCCCTAAAAATTACCGT +
Preference number: 2 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGVSRFS*VPKNYR
Trigger: ACGGTAATTTTTAGGGACTCAGGAGAATCTTGAAAC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR TCA 90 bp GCTCCTGTAGAATTTCAAAGATATTGGGTTGACGTAGAAATGCAACAATCTTGTGTTTCAAGATTCTCCTaGGTCCCTAAAAATTACCGT +
Preference number: 2 (lower is better)
Translates to: APVEFQRYWVDVEMQQSCVSRFS*VPKNYR
Trigger: ACGGTAATTTTTAGGGACTCAGGAGAATCTTGAAAC...ACAAGATTGTTGCATTTCTACGTCAACCCAATATCTTTGAAATTCTACAGGAGC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGGAGCTGATCATGTATaGGTTCATCTTTGTCTTGGA +
Preference number: 2 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHGADHV*VHLCLG
Trigger: TCCAAGACAAAGATGAACCCATACATGATCAGCTCC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTTGTGAATTTTATCACTaGAACTCAGCTATTAGGGCT +
Preference number: 2 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTCEFYH*NSAIRA
Trigger: AGCCCTAATAGCTGAGTTCCAGTGATAAAATTCACA...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR TCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGCTGTGTACTTTTTCCTaGTATGCTGTGATTAATTGC +
Preference number: 2 (lower is better)
Translates to: HNKWKKFGSQELLIERRLLCTFS*YAVINC
Trigger: GCAATTAATCACAGCATATCAGGAAAAAGTACACAG...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR CAA 90 bp GGTTTGTCTTTAGCCATAATTACACACATACCACTTGCATATACATaGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATAT +
Preference number: 2 (lower is better)
Translates to: GLSLAIITHIPLAYT*SQTILLQICKGTSY
Trigger: ATATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTGGTATGTGTGTAATTATGGCTAAAGACAAACC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCAAATGGAAAAAGTTTaGCAGTCAAGAACTGTTGAT +
Preference number: 2 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGQMEKV*QSRTVD
Trigger: ATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR GCA 72 bp CCCCAGCTCCTCCTGGTCAGGTACAGTGGCCGATTCTaGCCCTGGCCCTTCATCCTCCCCACTGGGCACCTG +
Preference number: 3 (lower is better)
Translates to: PQLLLVRYSGRF*PWPFILPTGHL
Trigger: CAGGTGCCCAGTGGGGAGGATGAAGGGCCAGGGGCAGAATCGGCCACTGTACCTGACCAGGAGGAGCTGGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 72 bp TTGAGAACCTCCAGTAGCGCCCTCCTCCTGGGCAGTTaGCCCTTCACAGGTGCCTTGGGCCTCCCCAGCACT +
Preference number: 3 (lower is better)
Translates to: LRTSSSALLLGS*PFTGALGLPST
Trigger: AGTGCTGGGGAGGCCCAAGGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGGAGGTTCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 72 bp CTGTATGGAGTTAGATCTCTGCAGCACCTGCGGGGCTaGGGGAGCTGTCGGTCGCTGCCACGTCGTGGTTCT +
Preference number: 3 (lower is better)
Translates to: LYGVRSLQHLRG*GSCRSLPRRGS
Trigger: AGAACCACGACGTGGCAGCGACCGACAGCTCCCCCAGCCCCGCAGGTGCTGCAGAGATCTAACTCCATACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 72 bp CGAAATCCCGCTTGTAAGGGGCTGGAGCCCGGGCATTaGCACGCTGGGTACCTGGCGAGTTCTGAGGAGATG +
Preference number: 3 (lower is better)
Translates to: RNPACKGLEPGH*HAGYLASSEEM
Trigger: CATCTCCTCAGAACTCGCCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAGCCCCTTACAAGCGGGATTTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 72 bp CCTCAGTTTGGCTTCGAAATCCCGCTTGTAAGGGGCTaGAGCCCGGGCATTGGCACGCTGGGTACCTGGCGA +
Preference number: 3 (lower is better)
Translates to: PQFGFEIPLVRG*SPGIGTLGTWR
Trigger: TCGCCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAGCCCCTTACAAGCGGGATTTCGAAGCCAAACTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 72 bp GCTGATCTACCTCTTGAGAGCCACACAGTTCAGCACTaGCCTGGTCAGCACTGGGTTGAGGCTCTGGGCCGC +
Preference number: 3 (lower is better)
Translates to: ADLPLESHTVQH*PGQHWVEALGR
Trigger: GCGGCCCAGAGCCTCAACCCAGTGCTGACCAGGGCAGTGCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 72 bp CAGCGCATTCCAGGTCACTCTCTCCCTCAGGCCTGGTaGTGGCTTCGCTCACACTCTCTGTCCTGGCAGGAT +
Preference number: 3 (lower is better)
Translates to: QRIPGHSLPQAW*WLRSHSLSWQD
Trigger: ATCCTGCCAGGACAGAGAGTGTGAGCGAAGCCAGCACCAGGCCTGAGGGAGAGAGTGACCTGGAATGCGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 72 bp ACCACAGGTAAAGAACCAGCAGTGCACACGGATTCCTaGGACCCTTCGGCAGGGCCACTGCTGGTGGGCTCT +
Preference number: 3 (lower is better)
Translates to: TTGKEPAVHTDS*DPSAGPLLVGS
Trigger: AGAGCCCACCAGCAGTGGCCCTGCCGAAGGGTCGCAGGAATCCGTGTGCACTGCTGGTTCTTTACCTGTGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 72 bp CACTGGGCACCTGTACCACAGGTAAAGAACCAGCAGTaGACACGGATTCCTGCGACCCTTCGGCAGGGCCAC +
Preference number: 3 (lower is better)
Translates to: HWAPVPQVKNQQ*TRIPATLRQGH
Trigger: GTGGCCCTGCCGAAGGGTCGCAGGAATCCGTGTGCACTGCTGGTTCTTTACCTGTGGTACAGGTGCCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 72 bp CGCATTCCAGGTCACTCTCTCCCTCAGGCCTGGTGCTaGCTTCGCTCACACTCTCTGTCCTGGCAGGATCAC +
Preference number: 3 (lower is better)
Translates to: RIPGHSLPQAWC*LRSHSLSWQDH
Trigger: GTGATCCTGCCAGGACAGAGAGTGTGAGCGAAGCCAGCACCAGGCCTGAGGGAGAGAGTGACCTGGAATGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 72 bp AGAGCCTCGTCCACCCTCTGGTACCGGCTAACATCCTaGCGCACTGAAGGTAGTGATCGCAGTGGCTGGTGG +
Preference number: 3 (lower is better)
Translates to: RASSTLWYRLTS*RTEGSDRSGWW
Trigger: CCACCAGCCACTGCGATCACTACCTTCAGTGCGCCAGGATGTTAGCCGGTACCAGAGGGTGGACGAGGCTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 72 bp GCCTCCCAGTTTGGTGGGAGAGCCTCGTCCACCCTCTaGTACCGGCTAACATCCTGGCGCACTGAAGGTAGT +
Preference number: 3 (lower is better)
Translates to: ASQFGGRASSTL*YRLTSWRTEGS
Trigger: ACTACCTTCAGTGCGCCAGGATGTTAGCCGGTACCAGAGGGTGGACGAGGCTCTCCCACCAAACTGGGAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 72 bp TTCAGCTGCTCCATTTGCTGTATGGAGTTAGATCTCTaGAGCACCTGCGGGGCTGGGGGAGCTGTCGGTCGC +
Preference number: 3 (lower is better)
Translates to: FSCSICCMELDL*STCGAGGAVGR
Trigger: GCGACCGACAGCTCCCCCAGCCCCGCAGGTGCTGCAGAGATCTAACTCCATACAGCAAATGGAGCAGCTGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CAA 90 bp TCAATGCGTGCCTCCCAGTTTGGTGGGAGAGCCTCGTCCACCCTCTGGTACCGGTGGGTAACCCAGGTCTaGCTGGAACTCGTGATCTTC +
Preference number: 3 (lower is better)
Translates to: SMRASQFGGRASSTLWYRWVTQV*LELVIF
Trigger: GAAGATCACGAGTTCCAGCAAGACCTGGGTTACCCA...CCGGTACCAGAGGGTGGACGAGGCTCTCCCACCAAACTGGGAGGCACGCATTGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 72 bp TCAGAAACTGGCCCATTAGAGCACACCTGGCTGTCGTaGTGGCTCCCTGGCATGTCCTCGTCATCGGAAGGG +
Preference number: 3 (lower is better)
Translates to: SETGPLEHTWLS*WLPGMSSSSEG
Trigger: CCCTTCCGATGACGAGGACATGCCAGGGAGCCATCACGACAGCCAGGTGTGCTCTAATGGGCCAGTTTCTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 72 bp AGACTCGGTCTCACTGACGGCTCTTCGGCTTCCTCCTaGTGCATCGGAAGTCCCTGTGTCTGCGCCACTTGT +
Preference number: 3 (lower is better)
Translates to: RLGLTDGSSASS*CIGSPCVCATC
Trigger: ACAAGTGGCGCAGACACAGGGACTTCCGATGCATCAGGAGGAAGCCGAAGAGCCGTCAGTGAGACCGAGTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 72 bp AAGGCTCAGAGCCCTGATCGAGAGACTCGGTCTCACTaGCGGCTCTTCGGCTTCCTCCTGATGCATCGGAAG +
Preference number: 3 (lower is better)
Translates to: KAQSPDRETRSH*RLFGFLLMHRK
Trigger: CTTCCGATGCATCAGGAGGAAGCCGAAGAGCCGTCAGTGAGACCGAGTCTCTCGATCAGGGCTCTGAGCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 72 bp CTTGGGGGTTCCATCGGCAGCACTGTCCTCAGAAACTaGCCCATTAGAGCACACCTGGCTGTCGTGATGGCT +
Preference number: 3 (lower is better)
Translates to: LGGSIGSTVLRN*PIRAHLAVVMA
Trigger: AGCCATCACGACAGCCAGGTGTGCTCTAATGGGCCAGTTTCTGAGGACAGTGCTGCCGATGGAACCCCCAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 72 bp GAGAGGAGCACCGTGTGTCCACAGAGGACAGCTGCGTaGTCACACTCTCATTGCAGGAGCTGTCAGCGCATT +
Preference number: 3 (lower is better)
Translates to: ERSTVCPQRTAA*SHSHCRSCQRI
Trigger: AATGCGCTGACAGCTCCTGCAATGAGAGTGTGACCACGCAGCTGTCCTCTGTGGACACACGGTGCTCCTCTC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 72 bp GCCTTGTCAGGTGTTGCCGATGAACCAGCGCACTTGTaGGTCTACTGCTCTGAAGTGGGAGCCGGGGATCAA +
Preference number: 3 (lower is better)
Translates to: ALSGVADEPAHL*VYCSEVGAGDQ
Trigger: TTGATCCCCGGCTCCCACTTCAGAGCAGTAGACCCACAAGTGCGCTGGTTCATCGGCAACACCTGACAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CAA 90 bp ACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAGGCCTGTCCTGAATGAATGCTaGGGGGTTCCATCGGCAGCA +
Preference number: 3 (lower is better)
Translates to: TLIAGAVSAFQVTLSLRPVLNEC*GVPSAA
Trigger: TGCTGCCGATGGAACCCCCAAGCATTCATTCAGGAC...AGGCCTGAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 72 bp TGTCCACAGAGGACAGCTGCGTGGTCACACTCTCATTaGAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTC +
Preference number: 3 (lower is better)
Translates to: CPQRTAAWSHSH*RSCQRIPGHSL
Trigger: GAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGTGTGACCACGCAGCTGTCCTCTGTGGACA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 72 bp TGGCTTCGCTCACACTCTCTGTCCTGGCAGGATCACTaGGTTCTGTTTCAGAGGACACCTGGGAAGGCTCAG +
Preference number: 3 (lower is better)
Translates to: WLRSHSLSWQDH*VLFQRTPGKAQ
Trigger: CTGAGCCTTCCCAGGTGTCCTCTGAAACAGAACCCAGTGATCCTGCCAGGACAGAGAGTGTGAGCGAAGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 72 bp GAGAGGCATCCGATGGCTTGTCGCTCCAGCAGCCTCTaGACTGGAATGGTTAGTTTCCCCAGAAAACGCTTG +
Preference number: 3 (lower is better)
Translates to: ERHPMACRSSSL*TGMVSFPRKRL
Trigger: CAAGCGTTTTCTGGGGAAACTAACCATTCCAGTCCAGAGGCTGCTGGAGCGACAAGCCATCGGATGCCTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 72 bp CTGATGCATCGGAAGTCCCTGTGTCTGCGCCACTTGTaGGCTGATCTACCTCTTGAGAGCCACACAGTTCAG +
Preference number: 3 (lower is better)
Translates to: LMHRKSLCLRHL*ADLPLESHTVQ
Trigger: CTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACACAGGGACTTCCGATGCATCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 72 bp ACAGGCTCCGTCTTCCTCCTCCTGAGAAGAAAAGGCTaGGGTTTCAGGAAACCGTGCGCTCTCAAGAGAGGA +
Preference number: 3 (lower is better)
Translates to: TGSVFLLLRRKG*GFRKPCALKRG
Trigger: TCCTCTCTTGAGAGCGCACGGTTTCCTGAAACCCCAGCCTTTTCTTCTCAGGAGGAGGAAGACGGAGCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 72 bp AGGCCAAGGCGGGCGGATCGCTTGAGCTCAAGAGTTTaGGACGTGCCTGGGCCTTGTCTCTACAAAAATACA +
Preference number: 3 (lower is better)
Translates to: RPRRADRLSSRV*DVPGPCLYKNT
Trigger: TGTATTTTTGTAGAGACAAGGCCCAGGCACGTCTCAAACTCTTGAGCTCAAGCGATCCGCCCGCCTTGGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR GCA 72 bp GAATGTACTGGATGGCCTGGGAAGAACTGGTGGTCCTaGATGTCGAGAATCTTCTCCTACCTCACCCGCACT +
Preference number: 3 (lower is better)
Translates to: ECTGWPGKNWWS*MSRIFSYLTRT
Trigger: AGTGCGGGTGAGGTAGGAGAAGATTCTCGACATGCAGGACCACCAGTTCTTCCCAGGCCATCCAGTACATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CAA 90 bp TTGAGAACCTCCAGTAGCGCCCTCCTCCTGGGCAGTTGCCCCTTCACAGGTGCCCCACTTGCATATACATaGTCACAGACCATCTTATTG +
Preference number: 3 (lower is better)
Translates to: LRTSSSALLLGSCPFTGAPLAYT*SQTILL
Trigger: CAATAAGATGGTCTGTGACAATGTATATGCAAGTGG...GGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGGAGGTTCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CAA 90 bp TTGAGAACCTCCAGTAGCGCCCTCCTCCTGGGCAGTTGCCCCTTCACAGGTGCCATGATGGGACGGCTCTaGGCAAATTTGTCTTTAATT +
Preference number: 3 (lower is better)
Translates to: LRTSSSALLLGSCPFTGAMMGRL*ANLSLI
Trigger: AATTAAAGACAAATTTGCCAAGAGCCGTCCCATCAT...GGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGGAGGTTCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CAA 90 bp GCTGGGCCTGCAGGTAAGGAGCTCTCTGCAAGCTCTGGAAGATTTTCTGGCTTATTCCCCAGAAAACGCTaGATGATGGGACGGCTCTTG +
Preference number: 3 (lower is better)
Translates to: AGPAGKELSASSGRFSGLFPRKR*MMGRLL
Trigger: CAAGAGCCGTCCCATCATCAAGCGTTTTCTGGGGAA...TAAGCCAGAAAATCTTCCAGAGCTTGCAGAGAGCTCCTTACCTGCAGGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 72 bp CTCTGTGTCTATTTCCAGAGTGGAGCTAGTCCTGAATaGATGCTTGGGGGTTCCATCGGCAGCACTGTCCTC +
Preference number: 3 (lower is better)
Translates to: LCVYFQSGASPE*MLGGSIGSTVL
Trigger: GAGGACAGTGCTGCCGATGGAACCCCCAAGCATTCATTCAGGACTAGCTCCACTCTGGAAATAGACACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 72 bp TGTAACAGCAACGTGATCCTGGATCTGGAGGTAGAGTaGGGCAGGATGTTCTCCCGTCGGAAATCTGCACTG +
Preference number: 3 (lower is better)
Translates to: CNSNVILDLEVE*GRMFSRRKSAL
Trigger: CAGTGCAGATTTCCGACGGGAGAACATCCTGCCTCACTCTACCTCCAGATCCAGGATCACGTTGCTGTTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 72 bp TCCTCATTCTCAACAGGGTTGTCCTCCAGCTTTGTCTaGGATGTCAGGCTTCCATCATCAGCTCTGGATGCC +
Preference number: 3 (lower is better)
Translates to: SSFSTGLSSSFV*DVRLPSSALDA
Trigger: GGCATCCAGAGCTGATGATGGAAGCCTGACATCTCAGACAAAGCTGGAGGACAACCCTGTTGAGAATGAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 72 bp CACACAGAATCTTCTTGGGCCGTTACTCCCTCGGAGTaGAGCAAATCCTTCATAGGGAATGCTGGATGTGCC +
Preference number: 3 (lower is better)
Translates to: HTESSWAVTPSE*SKSFIGNAGCA
Trigger: GGCACATCCAGCATTCCCTATGAAGGATTTGCTTCACTCCGAGGGAGTAACGGCCCAAGAAGATTCTGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 72 bp TGGTATTTTCCTCAGGCCTCTCATTGGTCATGGTTCTaGGGATACTCTGATATCGCCGGTTCAGCTGCTCCA +
Preference number: 3 (lower is better)
Translates to: WYFPQASHWSWF*GYSDIAGSAAP
Trigger: TGGAGCAGCTGAACCGGCGATATCAGAGTATCCGCAGAACCATGACCAATGAGAGGCCTGAGGAAAATACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 72 bp ATCTGCACTGGCTTGGTGAAAGTCAGCTTCCTCCCCTaGCCCATCAATAGCATTGGTATTTTCCTCAGGCCT +
Preference number: 3 (lower is better)
Translates to: ICTGLVKVSFLP*PINSIGIFLRP
Trigger: AGGCCTGAGGAAAATACCAATGCTATTGATGGGGCAGGGGAGGAAGCTGACTTTCACCAAGCCAGTGCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 72 bp GTACTGTGGCCTACTGACTGTATTGAATGTACTGGATaGCCTGGGAAGAACTGGTGGTCCTGCATGTCGAGA +
Preference number: 3 (lower is better)
Translates to: VLWPTDCIECTG*PGKNWWSCMSR
Trigger: TCTCGACATGCAGGACCACCAGTTCTTCCCAGGCCATCCAGTACATTCAATACAGTCAGTAGGCCACAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CAA 90 bp AGTAGCTGGGGTGGAGTAAGGCATGTGGAGGCACATACGACATTATCTCTTCTTGGCCTGGAGTGGCCATaGTGTTCGATAGCATCTAAG +
Preference number: 3 (lower is better)
Translates to: SSWGGVRHVEAHTTLSLLGLEWP*CSIASK
Trigger: CTTAGATGCTATCGAACACAATGGCCACTCCAGGCC...AAGAAGAGATAATGTCGTATGTGCCTCCACATGCCTTACTCCACCCCAGCTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CAA 90 bp GGCAGATCCAGACGGTTAAAACATGTATGCGCTCTGGGAAGAGCAGTGATTTTCTCCTCAGGCCTCTCATaGGTCATGGTTCTGCGGATA +
Preference number: 3 (lower is better)
Translates to: GRSRRLKHVCALGRAVIFSSGLS*VMVLRI
Trigger: TATCCGCAGAACCATGACCAATGAGAGGCCTGAGGA...GAAAATCACTGCTCTTCCCAGAGCGCATACATGTTTTAACCGTCTGGATCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR GCA 72 bp TTCAGCTGTGCCTGCGATGACCAATTCCAGTTCTCTTaGATCAAAAACAGATACCAGCCTGGCATCCACCAC +
Preference number: 3 (lower is better)
Translates to: FSCACDDQFQFS*IKNRYQPGIHH
Trigger: GTGGTGGATGCCAGGCTGGTATCTGTTTTTGATGCAAGAGAACTGGAATTGGTCATCGCAGGCACAGCTGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 72 bp TGTATTGAATGTACTGGATGGCCTGGGAAGAACTGGTaGTCCTGCATGTCGAGAATCTTCTCCTACCTCACC +
Preference number: 3 (lower is better)
Translates to: CIECTGWPGKNW*SCMSRIFSYLT
Trigger: GGTGAGGTAGGAGAAGATTCTCGACATGCAGGACCACCAGTTCTTCCCAGGCCATCCAGTACATTCAATACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CCA 72 bp GACTGTATTGAATGTACTGGATGGCCTGGGAAGAACTaGTGGTCCTGCATGTCGAGAATCTTCTCCTACCTC +
Preference number: 3 (lower is better)
Translates to: DCIECTGWPGKN*WSCMSRIFSYL
Trigger: GAGGTAGGAGAAGATTCTCGACATGCAGGACCACCAGTTCTTCCCAGGCCATCCAGTACATTCAATACAGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CAA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCAATGTGACAGAGCACTaGTTCCTGGAAAACAACAGC +
Preference number: 3 (lower is better)
Translates to: LGCSLGIKLTQILPRGLINVTEH*FLENNS
Trigger: GCTGTTGTTTTCCAGGAACAAGTGCTCTGTCACATT...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CAA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACACCTTTATCTGCTGCTaGGAGAATGCCAGCCCTGAA +
Preference number: 3 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHTFICC*ENASPE
Trigger: TTCAGGGCTGGCATTCTCCAAGCAGCAGATAAAGGT...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CAA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGGACCCCAGAAGTGGTTaGGGCTCAGGGATTGGGATT +
Preference number: 3 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEDPRSG*GSGIGI
Trigger: AATCCCAATCCCTGAGCCCAAACCACTTCTGGGGTC...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR TCA 72 bp CAGATGGAACATGATGCTTGTACCCTACAAAGTGCGTaGGGAGCTAAACGGACGATGTACCTGACAGCACTT +
Preference number: 3 (lower is better)
Translates to: QMEHDACTLQSA*GAKRTMYLTAL
Trigger: AAGTGCTGTCAGGTACATCGTCCGTTTAGCTCCTCACGCACTTTGTAGGGTACAAGCATCATGTTCCATCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR TCA 72 bp CATCGGAAGGGCTACCTAAGTCTCCATTCACAGAATTaGCTCCAAGTATTGTGCCAACAGCTTCTGGAGAGG +
Preference number: 3 (lower is better)
Translates to: HRKGYLSLHSQN*LQVLCQQLLER
Trigger: CCTCTCCAGAAGCTGTTGGCACAATACTTGGAGTCAATTCTGTGAATGGAGACTTAGGTAGCCCTTCCGATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CAA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGTTGATTGAAAGACGGTaGGGTTGTTCCCTGGGCATC +
Preference number: 3 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLLIERR*GCSLGI
Trigger: GATGCCCAGGGAACAACCCAACCGTCTTTCAATCAA...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CAA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGAGGCATCCGATGGCTaGTCGCTCCAGCAGCCTCTG +
Preference number: 3 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGEASDG*SLQQPL
Trigger: CAGAGGCTGCTGGAGCGACAAGCCATCGGATGCCTC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CAA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTGCGTGCCTCCCAGTTaGGTGGGAGAGCCTCGTCCA +
Preference number: 3 (lower is better)
Translates to: HNKWKKFGSQELLIERRLCVPPS*VGEPRP
Trigger: TGGACGAGGCTCTCCCACCAAACTGGGAGGCACGCA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATTGCCTTGTCAGGTGTaGCCGATGAACCAGCGCACT +
Preference number: 3 (lower is better)
Translates to: SEHFFTLQYVPLVQECNILPCQV*PMNQRT
Trigger: AGTGCGCTGGTTCATCGGCAACACCTGACAAGGCAA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CAA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTGTGGCTGCGTTGCCTaGTCAGGTGTTGCCGATGAA +
Preference number: 3 (lower is better)
Translates to: THRLANHMSIQCFYDPQFCGCVA*SGVADE
Trigger: TTCATCGGCAACACCTGACAAGGCAACGCAGCCACA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CAA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACAATGTGACAGAGCACTaGTTCCTGGAAAACAACAGC +
Preference number: 3 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHNVTEH*FLENNS
Trigger: GCTGTTGTTTTCCAGGAACAAGTGCTCTGTCACATT...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CAA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCGCTCTAATTTGGAGATaGGGCCAAATGCTGCCAGTT +
Preference number: 3 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCALIWR*GQMLPV
Trigger: AACTGGCAGCATTTGGCCCAATCTCCAAATTAGAGC...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CAA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGCACTTTACACTCTCGTaGTGTAAGTGCATCCTGGCT +
Preference number: 3 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLHFTLS*CKCILA
Trigger: AGCCAGGATGCACTTACACAACGAGAGTGTAAAGTG...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CAA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCCACTTTACACTCTCGTaGTGTAAGTGCATCCTGGCT +
Preference number: 3 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCHFTLS*CKCILA
Trigger: AGCCAGGATGCACTTACACAACGAGAGTGTAAAGTG...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGGCAGCTCTAGCTGTTaGTTCGCGAACATGTTGAGG +
Preference number: 3 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIGSSSC*FANMLR
Trigger: CCTCAACATGTTCGCGAACAAACAGCTAGAGCTGCC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 72 bp GAAGTATGTTCCTACCCCCACCAGCAAGCCCTAAGATaGTCCATCTACCGTTGTTTTAACTTTCCCTCCACT +
Preference number: 3 (lower is better)
Translates to: EVCSYPHQQALR*SIYRCFNFPST
Trigger: AGTGGAGGGAAAGTTAAAACAACGGTAGATGGATCATCTTAGGGCTTGCTGGTGGGGGTAGGAACATACTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CAA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGAATGTGACAGAGCACTaGTTCCTGGAAAACAACAGC +
Preference number: 3 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLNVTEH*FLENNS
Trigger: GCTGTTGTTTTCCAGGAACAAGTGCTCTGTCACATT...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTTGATTGAAAGACGGTaGGGTTGTTCCCTGGGCATC +
Preference number: 3 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWLIERR*GCSLGI
Trigger: GATGCCCAGGGAACAACCCAACCGTCTTTCAATCAA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CAA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGCTCTAATTTGGAGATaGGGCCAAATGCTGCCAGTT +
Preference number: 3 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNALIWR*GQMLPV
Trigger: AACTGGCAGCATTTGGCCCAATCTCCAAATTAGAGC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CAA 90 bp AGTAGCTGGGGTGGAGTAAGGCATGTGGAGGCACATACGACATTATCTCTTCTTTCTCCATTCACAGAATaGACTCCAAGTATTGTGCCA +
Preference number: 3 (lower is better)
Translates to: SSWGGVRHVEAHTTLSLLSPFTE*TPSIVP
Trigger: TGGCACAATACTTGGAGTCAATTCTGTGAATGGAGA...AAGAAGAGATAATGTCGTATGTGCCTCCACATGCCTTACTCCACCCCAGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 72 bp GAGCATAGCTTTCTTCTTCTCAGTCTGAAACCAAATTaGAGTATGTTCCTACCCCCACCAGCAAGCCCTAAG +
Preference number: 3 (lower is better)
Translates to: EHSFLLLSLKPN*SMFLPPPASPK
Trigger: CTTAGGGCTTGCTGGTGGGGGTAGGAACATACTTCAATTTGGTTTCAGACTGAGAAGAAGAAAGCTATGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR TCA 72 bp GGTTCCTTACCTGCATCAGTAATAGCTGATTCAGTTTaGATCACACAACACGGCTATCCACACTCCTCAGGT +
Preference number: 3 (lower is better)
Translates to: GSLPASVIADSV*ITQHGYPHSSG
Trigger: ACCTGAGGAGTGTGGATAGCCGTGTTGTGTGATTCAAACTGAATCAGCTATTACTGATGCAGGTAAGGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR CCA 72 bp GACTCTTGTAGCTCCATCGTCAAACAAACATCAAACTaGCACAGAGGGAATGCCAATGATGTGCTTGTTCTC +
Preference number: 3 (lower is better)
Translates to: DSCSSIVKQTSN*HRGNANDVLVL
Trigger: GAGAACAAGCACATCATTGGCATTCCCTCTGTGCCAGTTTGATGTTTGTTTGACGATGGAGCTACAAGAGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGCTCTAATTTGGAGATaGGGCCAAATGCTGCCAGTT +
Preference number: 3 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIALIWR*GQMLPV
Trigger: AACTGGCAGCATTTGGCCCAATCTCCAAATTAGAGC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CAA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACTTAACTTGCTCTAATTaGGAGATTGGGCCAAATGCT +
Preference number: 3 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHLTCSN*EIGPNA
Trigger: AGCATTTGGCCCAATCTCCAAATTAGAGCAAGTTAA...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CAA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCATCTCAAAGAAATGTTaGGGCAATGCCTGTAAACCC +
Preference number: 3 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCISKKC*GNACKP
Trigger: GGGTTTACAGGCATTGCCCAAACATTTCTTTGAGAT...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR TCA 72 bp CAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTaGAAGACGGTTGGGTTGTTCCCTGGGCATCAAGCT +
Preference number: 3 (lower is better)
Translates to: QMEKVWQSRTVD*KTVGLFPGHQA
Trigger: AGCTTGATGCCCAGGGAACAACCCAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR TCA 72 bp TACAAAGTGCGTGAGGAGCTAAACGGACGATGTACCTaGCAGCACTTTGAAACTATAAAGCACTATGCAAGC +
Preference number: 3 (lower is better)
Translates to: YKVREELNGRCT*QHFETIKHYAS
Trigger: GCTTGCATAGTGCTTTATAGTTTCAAAGTGCTGTCAGGTACATCGTCCGTTTAGCTCCTCACGCACTTTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR CCA 72 bp GCTCTAATTTGGAGATTGGGCCAAATGCTGCCAGTTTaGCTTGAACCACGTTCAAGGGTAAGTTTCAAGATT +
Preference number: 3 (lower is better)
Translates to: ALIWRLGQMLPV*LEPRSRVSFKI
Trigger: AATCTTGAAACTTACCCTTGAACGTGGTTCAAGCCAAACTGGCAGCATTTGGCCCAATCTCCAAATTAGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR CCA 72 bp TTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATaGAAAAGGATGGGTAGGGAGGCAGATCCAGACGGT +
Preference number: 3 (lower is better)
Translates to: FLQLLSTVFHKA*KRMGREADPDG
Trigger: ACCGTCTGGATCTGCCTCCCTACCCATCCTTTTCCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGAATGTGACAGAGCACTaGTTCCTGGAAAACAACAGC +
Preference number: 3 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWNVTEH*FLENNS
Trigger: GCTGTTGTTTTCCAGGAACAAGTGCTCTGTCACATT...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CAA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTAATGTGACAGAGCACTaGTTCCTGGAAAACAACAGC +
Preference number: 3 (lower is better)
Translates to: THRLANHMSIQCFYDPQFNVTEH*FLENNS
Trigger: GCTGTTGTTTTCCAGGAACAAGTGCTCTGTCACATT...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CAA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTTTGGAGGAAGCATCTaGGAAACCTCACTGAATGTG +
Preference number: 3 (lower is better)
Translates to: THRLANHMSIQCFYDPQFFGGSI*ETSLNV
Trigger: CACATTCAGTGAGGTTTCCAAGATGCTTCCTCCAAA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACAGTCTGAAACCAAATaGAAGTATGTTCCTACCCCC +
Preference number: 3 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIQSETK*KYVPTP
Trigger: GGGGGTAGGAACATACTTCAATTTGGTTTCAGACTG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR TCA 72 bp AAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTaGAAACCAATGGTGCATTGTAGAATAGATGAAGGG +
Preference number: 3 (lower is better)
Translates to: KWFGLRDWDFSH*KPMVHCRIDEG
Trigger: CCCTTCATCTATTCTACAATGCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR TCA 72 bp CCCAGAAACCATACAACTAGGGCCATCTTATTCTGCTaGGCTGTTCAATTACGAAAGCCAAATAAACGACTC +
Preference number: 3 (lower is better)
Translates to: PRNHTTRAILFC*AVQLRKPNKRL
Trigger: GAGTCGTTTATTTGGCTTTCGTAATTGAACAGCTCAGCAGAATAAGATGGCCCTAGTTGTATGGTTTCTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CAA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTTGATTGAAAGACGGTaGGGTTGTTCCCTGGGCATC +
Preference number: 3 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGLIERR*GCSLGI
Trigger: GATGCCCAGGGAACAACCCAACCGTCTTTCAATCAA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CAA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTTAACTTGCTCTAATTaGGAGATTGGGCCAAATGCT +
Preference number: 3 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNLTCSN*EIGPNA
Trigger: AGCATTTGGCCCAATCTCCAAATTAGAGCAAGTTAA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CAA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGTTAACTTGCTCTAATTaGGAGATTGGGCCAAATGCT +
Preference number: 3 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEELTCSN*EIGPNA
Trigger: AGCATTTGGCCCAATCTCCAAATTAGAGCAAGTTAA...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CAA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTATCTCAAAGAAATGTTaGGGCAATGCCTGTAAACCC +
Preference number: 3 (lower is better)
Translates to: THRLANHMSIQCFYDPQFISKKC*GNACKP
Trigger: GGGTTTACAGGCATTGCCCAAACATTTCTTTGAGAT...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CAA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGAAAGTGTACTGTTATTaGGGAAAAAGTTGGATGCCT +
Preference number: 3 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLKVYCY*GKSWMP
Trigger: AGGCATCCAACTTTTTCCCAAATAACAGTACACTTT...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CAA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTCCTGGCTTCAACACTaGACCAGTATTGACATACTA +
Preference number: 3 (lower is better)
Translates to: THRLANHMSIQCFYDPQFSWLQH*TSIDIL
Trigger: TAGTATGTCAATACTGGTCAAGTGTTGAAGCCAGGA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR CCA 72 bp AAGAAATGTTTGGGCAATGCCTGTAAACCCATAGGCTaGCAAACCATATGTCAATCCAATGCTTTTATGACC +
Preference number: 3 (lower is better)
Translates to: KKCLGNACKPIG*QTICQSNAFMT
Trigger: GGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGTTTACAGGCATTGCCCAAACATTTCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CAA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGGCAGTCAAGAACTGTaGATTGAAAGACGGTTGGGT +
Preference number: 3 (lower is better)
Translates to: HNKWKKFGSQELLIERRLGSQEL*IERRLG
Trigger: ACCCAACCGTCTTTCAATCAACAGTTCTTGACTGCC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACCACTTGCATATACATaGTCACAGACCATCTTATTG +
Preference number: 3 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIPLAYT*SQTILL
Trigger: CAATAAGATGGTCTGTGACAATGTATATGCAAGTGG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CAA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGGCAGTCAAGAACTGTaGATTGAAAGACGGTTGGGT +
Preference number: 3 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHGSQEL*IERRLG
Trigger: ACCCAACCGTCTTTCAATCAACAGTTCTTGACTGCC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CAA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGCTCTAATTTGGAGATaGGGCCAAATGCTGCCAGTT +
Preference number: 3 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHALIWR*GQMLPV
Trigger: AACTGGCAGCATTTGGCCCAATCTCCAAATTAGAGC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CAA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTTTGGAGGAAGCATCTaGGAAACCTCACTGAATGTG +
Preference number: 3 (lower is better)
Translates to: HNKWKKFGSQELLIERRLFGGSI*ETSLNV
Trigger: CACATTCAGTGAGGTTTCCAAGATGCTTCCTCCAAA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CAA 90 bp GCTCCTGTAGAATTTCAAAGATATTGGGTTGACGTAGAAATGCAACAATCTTGTGTTCAGCTGCTCCATTaGCTGTATGGAGTTAGATCT +
Preference number: 3 (lower is better)
Translates to: APVEFQRYWVDVEMQQSCVQLLH*LYGVRS
Trigger: AGATCTAACTCCATACAGCAAATGGAGCAGCTGAAC...ACAAGATTGTTGCATTTCTACGTCAACCCAATATCTTTGAAATTCTACAGGAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 72 bp TGTAAGTGCATCCTGGCTTCAACACTTGACCAGTATTaGCATACTATTACTTGCCATTGCTTCCCAATAGAA +
Preference number: 3 (lower is better)
Translates to: CKCILASTLDQY*HTITCHCFPIE
Trigger: TTCTATTGGGAAGCAATGGCAAGTAATAGTATGTCAATACTGGTCAAGTGTTGAAGCCAGGATGCACTTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CAA 90 bp GTCCAAAAGTACTGGTTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATGGCCAATTCCAGTTCTCTaGCATCAAAAACAGATACCA +
Preference number: 3 (lower is better)
Translates to: VQKYWFLQLLSTVFHKAWPIPVL*HQKQIP
Trigger: TGGTATCTGTTTTTGATGCAAGAGAACTGGAATTGG...CCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGTACTTTTGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR TCA 72 bp ACAGCACATAGCTTTATCCTAAAGGAAGCATCCTCTTaGAACTTCCAATGTTCAATCATTCTTCTAGAAGGC +
Preference number: 3 (lower is better)
Translates to: TAHSFILKEASS*NFQCSIILLEG
Trigger: GCCTTCTAGAAGAATGATTGAACATTGGAAGTTTCAAGAGGATGCTTCCTTTAGGATAAAGCTATGTGCTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CAA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTTAACTTGCTCTAATTaGGAGATTGGGCCAAATGCT +
Preference number: 3 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGLTCSN*EIGPNA
Trigger: AGCATTTGGCCCAATCTCCAAATTAGAGCAAGTTAA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR-3UTR CAA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGCCACTTGCATATACATaGTCACAGACCATCTTATTG +
Preference number: 3 (lower is better)
Translates to: HNKWKKFGSQELLIERRLPLAYT*SQTILL
Trigger: CAATAAGATGGTCTGTGACAATGTATATGCAAGTGG...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR GCA 72 bp TTTGGCATTTCACTGATAATTTCAAAATCTTTGAGTTaGTCCTTCACAGATCAGCTCCCTACACACTTTACA +
Preference number: 3 (lower is better)
Translates to: FGISLIISKSLS*SFTDQLPTHFT
Trigger: TGTAAAGTGTGTAGGGAGCTGATCTGTGAAGGAGCAACTCAAAGATTTTGAAATTATCAGTGAAATGCCAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CAA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATCCACTTGCATATACATaGTCACAGACCATCTTATTG +
Preference number: 3 (lower is better)
Translates to: IRPESLVIWVHSPEENIYPLAYT*SQTILL
Trigger: CAATAAGATGGTCTGTGACAATGTATATGCAAGTGG...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR-3UTR CAA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGAAAGTGTACTGTTATTaGGGAAAAAGTTGGATGCCT +
Preference number: 3 (lower is better)
Translates to: HNKWKKFGSQELLIERRLKVYCY*GKSWMP
Trigger: AGGCATCCAACTTTTTCCCAAATAACAGTACACTTT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR GCA 72 bp TACCACTTGCATATACATTGTCACAGACCATCTTATTaGAAATCTGTAAAGGTACCTCATATTGACTTGGTT +
Preference number: 3 (lower is better)
Translates to: YHLHIHCHRPSY*KSVKVPHIDLV
Trigger: AACCAAGTCAATATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTGGTA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR GCA 72 bp TGGTTTGTCTTTAGCCATAATTACACACATACCACTTaGATATACATTGTCACAGACCATCTTATTGCAAAT +
Preference number: 3 (lower is better)
Translates to: WFVFSHNYTHTT*IYIVTDHLIAN
Trigger: ATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTGGTATGTGTGTAATTATGGCTAAAGACAAACCA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR CAA 72 bp ACAGGTGCCTTGGGCCTCCCCAGCACTGCCTTCTTCTaGCGGTGGGCTCTCGGCAGCAGCTGCAGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: TGALGLPSTAFF*RWALGSSCSSL
Trigger: GAGGGAGCTGCAGCTGCTGCCGAGAGCCCACCGCAAGAAGAAGGCAGTGCTGGGGAGGCCCAAGGCACCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACAGGCTCCCCCTCCGCTaGCAGACCTCCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDRLPLR*QTSPSS
Trigger: GGAGCTGGGGGAGGTCTGGCAGCGGAGGGGGAGCCT...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGAGAACCTCCAGTAGCGCCCTCCTCCTGGGCAGTTGCCCCTTCACAGGTGCCTGCCTCCCAGTTTGGTaGGAGAGCCTCGTCCACCCT +
Preference number: 4 (lower is better)
Translates to: LRTSSSALLLGSCPFTGACLPVW*ESLVHP
Trigger: AGGGTGGACGAGGCTCTCCCACCAAACTGGGAGGCA...GGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGGAGGTTCTCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp TCTGGAGAGGCATCCGATGGCTTGTCGCTCCAGCAGCCTCTGGACTGGAATGGTCACACCTGGCTGTCGTaGTGGCTCCCTGGCATGTCC +
Preference number: 4 (lower is better)
Translates to: SGEASDGLSLQQPLDWNGHTWLS*WLPGMS
Trigger: GGACATGCCAGGGAGCCATCACGACAGCCAGGTGTG...ACCATTCCAGTCCAGAGGCTGCTGGAGCGACAAGCCATCGGATGCCTCTCCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGAGAACCTCCAGTAGCGCCCTCCTCCTGGGCAGTTGCCCCTTCACAGGTGCCGGAAGTCCCTGTGTCTaGGCCACTTGTGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: LRTSSSALLLGSCPFTGAGSPCV*ATCGLI
Trigger: GATCAGCCCACAAGTGGCGCAGACACAGGGACTTCC...GGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGGAGGTTCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGAGAACCTCCAGTAGCGCCCTCCTCCTGGGCAGTTGCCCCTTCACAGGTGCCGGAGCTGTCGGTCGCTaGCACGTCGTGGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LRTSSSALLLGSCPFTGAGAVGR*HVVVLF
Trigger: AAACAGAACCACGACGTGGCAGCGACCGACAGCTCC...GGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGGAGGTTCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGAGAACCTCCAGTAGCGCCCTCCTCCTGGGCAGTTGCCCCTTCACAGGTGCCGCACTGTGGCTGCGTTaGCTTGTCAGGTGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: LRTSSSALLLGSCPFTGAALWLR*LVRCCR
Trigger: TCGGCAACACCTGACAAGGCAACGCAGCCACAGTGC...GGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGGAGGTTCTCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp CAGTGGGAAAACTACTCCTCAGTTTCGGAGAGGCACCCATGGACCTCTCAGAGCCTGGAGCCCGGGCATTaGCACGCTGGGTACCTGGCG +
Preference number: 4 (lower is better)
Translates to: QWENYSSVSERHPWTSQSLEPGH*HAGYLA
Trigger: CGCCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAG...GCTCTGAGAGGTCCATGGGTGCCTCTCCGAAACTGAGGAGTAGTTTTCCCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCAGGCTCCCCCTCCGCTaGCAGACCTCCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIRLPLR*QTSPSS
Trigger: GGAGCTGGGGGAGGTCTGGCAGCGGAGGGGGAGCCT...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGGGCCTCCCCAGCACTaGCTTCTTCTTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDGPPQH*LLLAVG
Trigger: GCCCACCGCAAGAAGAAGGCAGTGCTGGGGAGGCCC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CAGTGGGAAAACTACTCCTCAGTTTCGGAGAGGCACCCATGGACCTCTCAGAGCTGCCCTGGTCAGCACTaGGTTGAGGCTCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: QWENYSSVSERHPWTSQSCPGQH*VEALGR
Trigger: GCGGCCCAGAGCCTCAACCCAGTGCTGACCAGGGCA...GCTCTGAGAGGTCCATGGGTGCCTCTCCGAAACTGAGGAGTAGTTTTCCCACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp GGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCACTGCCCTGGTCAGCACTCCTGGTCAGGTACAGTaGCCGATTCTGCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: GLIYLLRATQFSTALVSTPGQVQ*PILPLA
Trigger: GGCCAGGGGCAGAATCGGCCACTGTACCTGACCAGG...AGTGCTGACCAGGGCAGTGCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CAA 72 bp CCCTGTGTCTGCGCCACTTGTGGGCTGATCTACCTCTaGAGAGCCACACAGTTCAGCACTGCCCTGGTCAGC +
Preference number: 4 (lower is better)
Translates to: PCVCATCGLIYL*RATQFSTALVS
Trigger: GCTGACCAGGGCAGTGCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACACAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTGGTCAGCACTGGGTTaGGGCTCTGGGCCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDWSALG*GSGPPS
Trigger: TGAAGGCGGCCCAGAGCCTCAACCCAGTGCTGACCA...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTGGTGGCCGTTGGCTTaGGAACCTCCAGTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDWWPLA*EPPVAP
Trigger: GGGCGCTACTGGAGGTTCTCAAGCCAACGGCCACCA...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGTAGACCGTCTCTCCTaGCCGTGGTGGGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDVDRLS*PWWAQV
Trigger: CACCTGTGCCCACCACGGGCAGGAGAGACGGTCTAC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TGTGTCTGCGCCACTTGTGGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCGTAGACCGTCTCTCCTaGCCGTGGTGGGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: CVCATCGLIYLLRATQFSVDRLS*PWWAQV
Trigger: CACCTGTGCCCACCACGGGCAGGAGAGACGGTCTAC...GCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp TCTGGAGAGGCATCCGATGGCTTGTCGCTCCAGCAGCCTCTGGACTGGAATGGTGTGGCTGTCAATGCGTaGCTCCCAGTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SGEASDGLSLQQPLDWNGVAVNA*LPVWWE
Trigger: CTCCCACCAAACTGGGAGGCACGCATTGACAGCCAC...ACCATTCCAGTCCAGAGGCTGCTGGAGCGACAAGCCATCGGATGCCTCTCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCTGGCATGGAGCTCTaGGCGGCAAGGCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDSGMEL*AARLWR
Trigger: CCTCCAGAGCCTTGCCGCCCAGAGCTCCATGCCAGA...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGGTCGGTGTCGCTGTTaGCCCGCTGCAGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDGRCRC*PAAGSC
Trigger: ACATGACCCTGCAGCGGGCCAACAGCGACACCGACC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCTCTCCTGCCCGTGGTaGGCACAGGTGGGGAAACTG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDLSCPW*AQVGKL
Trigger: CAGTTTCCCCACCTGTGCCCACCACGGGCAGGAGAG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGAGAACCTCCAGTAGCGCCCTCCTCCTGGGCAGTTGCCCCTTCACAGGTGCCTCACACTCTCTGTCCTaGCAGGATCACTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: LRTSSSALLLGSCPFTGASHSLS*QDHWVL
Trigger: CAGAACCCAGTGATCCTGCCAGGACAGAGAGTGTGA...GGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGGAGGTTCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGCGTGCCTCCCAGTTTaGTGGGAGAGCCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDACLPV*WESLVH
Trigger: GTGGACGAGGCTCTCCCACCAAACTGGGAGGCACGC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGAGAACCTCCAGTAGCGCCCTCCTCCTGGGCAGTTGCCCCTTCACAGGTGCCCCTCAGGCCTCTCATTaGTCATGGTTCTGCGGATAC +
Preference number: 4 (lower is better)
Translates to: LRTSSSALLLGSCPFTGAPQASH*SWFCGY
Trigger: GTATCCGCAGAACCATGACCAATGAGAGGCCTGAGG...GGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGGAGGTTCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGAGAACCTCCAGTAGCGCCCTCCTCCTGGGCAGTTGCCCCTTCACAGGTGCCATGTACTGGATGGCCTaGGAAGAACTGGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LRTSSSALLLGSCPFTGAMYWMA*EELVVL
Trigger: CAGGACCACCAGTTCTTCCCAGGCCATCCAGTACAT...GGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGGAGGTTCTCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp CACTGGGCACCTGTACCACAGGTAAAGAACCAGCAGTGCACACGGATTCCTGCGTACAGTGGCCGATTCTaGCCCTGGCCCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: HWAPVPQVKNQQCTRIPAYSGRF*PWPFIL
Trigger: GAGGATGAAGGGCCAGGGGCAGAATCGGCCACTGTA...CGCAGGAATCCGTGTGCACTGCTGGTTCTTTACCTGTGGTACAGGTGCCCAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCTCCTCCTGGGCAGTTaGCCCTTCACAGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDLLLGS*PFTGAL
Trigger: CAAGGCACCTGTGAAGGGGCAACTGCCCAGGAGGAG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCTGGAGAGGCATCCGATGGCTTGTCGCTCCAGCAGCCTCTGGACTGGAATGGTCCACGTAGAAGATCCTaGCGTGGCTGTCAATGCGTG +
Preference number: 4 (lower is better)
Translates to: SGEASDGLSLQQPLDWNGPRRRS*RGCQCV
Trigger: CACGCATTGACAGCCACGGCAGGATCTTCTACGTGG...ACCATTCCAGTCCAGAGGCTGCTGGAGCGACAAGCCATCGGATGCCTCTCCAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGATCTCTGCAGCACCTaGGGGGCTGGGGGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIDLCST*GAGGAV
Trigger: GACAGCTCCCCCAGCCCCGCAGGTGCTGCAGAGATC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GCTGGGCCTGCAGGTAAGGAGCTCTCTGCAAGCTCTGGAAGATTTTCTGGCTTACTCTCCTGCCCGTGGTaGGCACAGGTGGGGAAACTG +
Preference number: 4 (lower is better)
Translates to: AGPAGKELSASSGRFSGLLSCPW*AQVGKL
Trigger: CAGTTTCCCCACCTGTGCCCACCACGGGCAGGAGAG...TAAGCCAGAAAATCTTCCAGAGCTTGCAGAGAGCTCCTTACCTGCAGGCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCGGAGAGGCACCCATaGACCTCTCAGAGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDSERHP*TSQSRS
Trigger: CGACCTGCTCTGAGAGGTCCATGGGTGCCTCTCCGA...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTGCCCTGGTCAGCACTaGGTTGAGGCTCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLICPGQH*VEALGR
Trigger: GCGGCCCAGAGCCTCAACCCAGTGCTGACCAGGGCA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACACCTCACCCGCACTGTaGCTGCGTTGCCTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDTSPAL*LRCLVR
Trigger: CCTGACAAGGCAACGCAGCCACAGTGCGGGTGAGGT...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCCGCTTGTAAGGGGCTaGAGCCCGGGCATTGGCACG +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIPLVRG*SPGIGT
Trigger: CGTGCCAATGCCCGGGCTCCAGCCCCTTACAAGCGG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR CAA 72 bp GTTGCCTTGTCAGGTGTTGCCGATGAACCAGCGCACTaGTGGGTCTACTGCTCTGAAGTGGGAGCCGGGGAT +
Preference number: 4 (lower is better)
Translates to: VALSGVADEPAH*WVYCSEVGAGD
Trigger: ATCCCCGGCTCCCACTTCAGAGCAGTAGACCCACAAGTGCGCTGGTTCATCGGCAACACCTGACAAGGCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp ACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAGGCCTTCTGCACTGGCTTGGTaGAAGTCAGCTTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: TLIAGAVSAFQVTLSLRPSALAW*KSASSP
Trigger: AGGGGAGGAAGCTGACTTTCACCAAGCCAGTGCAGA...AGGCCTGAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACAGGTGGAGGTTGCAGTaGGCTCATGTGCCACTGCAC +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDRWRLQ*AHVPLH
Trigger: GTGCAGTGGCACATGAGCTCACTGCAACCTCCACCT...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TCAATGCGTGCCTCCCAGTTTGGTGGGAGAGCCTCGTCCACCCTCTGGTACCGGGGCTCCTGTCCAGTATaGATGACACTAAAAGCCACT +
Preference number: 4 (lower is better)
Translates to: SMRASQFGGRASSTLWYRGSCPV*MTLKAT
Trigger: AGTGGCTTTTAGTGTCATTCATACTGGACAGGAGCC...CCGGTACCAGAGGGTGGACGAGGCTCTCCCACCAAACTGGGAGGCACGCATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCCCTCCATGCCTTCTaGCCCCATCATCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDSLHAF*PHHHSW
Trigger: CCAGCTGTGATGATGGGGGCAGAAGGCATGGAGGGA...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp GGTCACACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCCACACAGTTCAGCACTaGCCTGGTCAGCACTGGGTT +
Preference number: 4 (lower is better)
Translates to: GHTLIAGAVSAFQVTLSLHTVQH*PGQHWV
Trigger: AACCCAGTGCTGACCAGGGCAGTGCTGAACTGTGTG...GAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGTGTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTAGGCTCCCCCTCCGCTaGCAGACCTCCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVRLPLR*QTSPSS
Trigger: GGAGCTGGGGGAGGTCTGGCAGCGGAGGGGGAGCCT...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TGTGTCTGCGCCACTTGTGGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCCACTTGTGGGTCTACTaGTCTGAAGTGGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: CVCATCGLIYLLRATQFSHLWVY*SEVGAG
Trigger: CCCGGCTCCCACTTCAGAGCAGTAGACCCACAAGTG...GCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCTCTCCTGCCCGTGGTaGGCACAGGTGGGGAAACTG +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLILSCPW*AQVGKL
Trigger: CAGTTTCCCCACCTGTGCCCACCACGGGCAGGAGAG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGTCGTGATGGCTCCCTaGCATGTCCTCGTCATCGGA +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDVVMAP*HVLVIG
Trigger: TCCGATGACGAGGACATGCCAGGGAGCCATCACGAC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TGTGTCTGCGCCACTTGTGGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCGTCCCCGGCCTGGAGTaGCCATTGTGTTCGATAGCA +
Preference number: 4 (lower is better)
Translates to: CVCATCGLIYLLRATQFSVPGLE*PLCSIA
Trigger: TGCTATCGAACACAATGGCCACTCCAGGCCGGGGAC...GCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACGGCAGGGCCACTGCTaGTGGGCTCTGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKRQGHC*WALLHR
Trigger: CCTGTGCAGCAGAGCCCACCAGCAGTGGCCCTGCCG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCCTGGTCAGGTACAGTaGCCGATTCTGCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIPGQVQ*PILPLA
Trigger: GGCCAGGGGCAGAATCGGCCACTGTACCTGACCAGG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGTAGCGCCCTCCTCCTaGGCAGTTGCCCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIVAPSS*AVAPSQ
Trigger: CTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTAC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACTGGAGCCCGGGCATTaGCACGCTGGGTACCTGGCG +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKLEPGH*HAGYLA
Trigger: CGCCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCTGGAGAGGCATCCGATGGCTTGTCGCTCCAGCAGCCTCTGGACTGGAATGGTTGTGCCAACAGCTTCTaGAGAGGCATCCGATGGCTT +
Preference number: 4 (lower is better)
Translates to: SGEASDGLSLQQPLDWNGCANSF*RGIRWL
Trigger: AAGCCATCGGATGCCTCTCCAGAAGCTGTTGGCACA...ACCATTCCAGTCCAGAGGCTGCTGGAGCGACAAGCCATCGGATGCCTCTCCAGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CAA 72 bp GTGTCCACAGAGGACAGCTGCGTGGTCACACTCTCATaGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCT +
Preference number: 4 (lower is better)
Translates to: VSTEDSCVVTLS*QELSAHSRSLS
Trigger: AGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGTGTGACCACGCAGCTGTCCTCTGTGGACAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp ACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAGGCCTGGAGCTAGTCCTGAATaGATGCTTGGGGGTTCCATC +
Preference number: 4 (lower is better)
Translates to: TLIAGAVSAFQVTLSLRPGASPE*MLGGSI
Trigger: GATGGAACCCCCAAGCATTCATTCAGGACTAGCTCC...AGGCCTGAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGTGGGTCTACTGCTCTaGAGTGGGAGCCGGGGATCA +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIVGLLL*SGSRGS
Trigger: TGATCCCCGGCTCCCACTTCAGAGCAGTAGACCCAC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACAAGGTCTGCATCGCTTaGAAGGCGCACCAATCCTGG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDKVCIA*KAHQSW
Trigger: CCAGGATTGGTGCGCCTTTCAAGCGATGCAGACCTT...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCTCACAAAAAGCAGGTaGTCCCGGGCTGAACTAGCC +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDLTKSR*SRAELA
Trigger: GGCTAGTTCAGCCCGGGAGCACCTGCTTTTTGTGAG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR GCA 90 bp GGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCACTGCCCTGGTCAGCACTGTCAGCTTCCTCCCCTaGCCCATCAATAGCATTGGT +
Preference number: 4 (lower is better)
Translates to: GLIYLLRATQFSTALVSTVSFLP*PINSIG
Trigger: ACCAATGCTATTGATGGGGCAGGGGAGGAAGCTGAC...AGTGCTGACCAGGGCAGTGCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp TCAATGCGTGCCTCCCAGTTTGGTGGGAGAGCCTCGTCCACCCTCTGGTACCGGCCACAAAGAATGCCTTaGCCTGGTGATCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: SMRASQFGGRASSTLWYRPQRMP*PGDHVS
Trigger: TGAAACATGATCACCAGGGCAAGGCATTCTTTGTGG...CCGGTACCAGAGGGTGGACGAGGCTCTCCCACCAAACTGGGAGGCACGCATTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp GGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCACTGCCCTGGTCAGCACTGGTCCACTTCACGGATaGTCCTGCTTCTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GLIYLLRATQFSTALVSTGPLHG*SCFSSS
Trigger: AGAGGAAGAGAAGCAGGAGCATCCGTGAAGTGGACC...AGTGCTGACCAGGGCAGTGCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp ACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAGGCCTCCCCATCATCACAGCTaGGTTCTTCACGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: TLIAGAVSAFQVTLSLRPPHHHS*VLHGDA
Trigger: TGCATCACCGTGAAGAACCCAGCTGTGATGATGGGG...AGGCCTGAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACTGCCCTGGTCAGCACTaGGTTGAGGCTCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHCPGQH*VEALGR
Trigger: GCGGCCCAGAGCCTCAACCCAGTGCTGACCAGGGCA...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTCTCTCCCTCAGGCCTaGTGCTGGCTTCGCTCACAC +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLISLPQA*CWLRSH
Trigger: GTGTGAGCGAAGCCAGCACCAGGCCTGAGGGAGAGA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCAGAGGACAGCTGCGTaGTCACACTCTCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDQRTAA*SHSHCR
Trigger: CCTGCAATGAGAGTGTGACCACGCAGCTGTCCTCTG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TGTGTCTGCGCCACTTGTGGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCCTTCATCCTCCCCACTaGGCACCTGTACCACAGGTA +
Preference number: 4 (lower is better)
Translates to: CVCATCGLIYLLRATQFSLHPPH*APVPQV
Trigger: TACCTGTGGTACAGGTGCCCAGTGGGGAGGATGAAG...GCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp GGTCACACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAAGGCGCACCAATCCTaGAGTCCCTTCAGTTCGGAT +
Preference number: 4 (lower is better)
Translates to: GHTLIAGAVSAFQVTLSLKAHQS*SPFSSD
Trigger: ATCCGAACTGAAGGGACTCCAGGATTGGTGCGCCTT...GAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGTGTGACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGACTGGAGCCCGGGCATTaGCACGCTGGGTACCTGGCG +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRLEPGH*HAGYLA
Trigger: CGCCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAG...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR CAA 72 bp CTCCTGATGCATCGGAAGTCCCTGTGTCTGCGCCACTaGTGGGCTGATCTACCTCTTGAGAGCCACACAGTT +
Preference number: 4 (lower is better)
Translates to: LLMHRKSLCLRH*WADLPLESHTV
Trigger: AACTGTGTGGCTCTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACACAGGGACTTCCGATGCATCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAATGGTCAGCACTGGGTTaGGGCTCTGGGCCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKWSALG*GSGPPS
Trigger: TGAAGGCGGCCCAGAGCCTCAACCCAGTGCTGACCA...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp GGCAGATCCAGACGGTTAAAACATGTATGCGCTCTGGGAAGAGCAGTGATTTTCTGGTCAGCACTGGGTTaGGGCTCTGGGCCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: GRSRRLKHVCALGRAVIFWSALG*GSGPPS
Trigger: TGAAGGCGGCCCAGAGCCTCAACCCAGTGCTGACCA...GAAAATCACTGCTCTTCCCAGAGCGCATACATGTTTTAACCGTCTGGATCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGAAGGCTCAGAGCCCTaGTCGAGAGACTCGGTCTCA +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIEGSEP*SRDSVS
Trigger: TGAGACCGAGTCTCTCGATCAGGGCTCTGAGCCTTC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCCCTCCGGACTTTGGTaGTCATGTGCTTCAAACACG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDPSGLW*SCASNT
Trigger: CGTGTTTGAAGCACATGATCACCAAAGTCCGGAGGG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTGTTCGCGAACATGTTaGGGAATCCCACAAGGTCGC +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDCSRTC*GIPQGR
Trigger: GCGACCTTGTGGGATTCCTCAACATGTTCGCGAACA...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CAGTGGGAAAACTACTCCTCAGTTTCGGAGAGGCACCCATGGACCTCTCAGAGCTCCAGTCCCCAAATGTaGCAGAGCACTTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QWENYSSVSERHPWTSQSSSPQM*QSTCSW
Trigger: CCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGA...GCTCTGAGAGGTCCATGGGTGCCTCTCCGAAACTGAGGAGTAGTTTTCCCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTCCCTCCATGCCTTCTaGCCCCATCATCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLISLHAF*PHHHSW
Trigger: CCAGCTGTGATGATGGGGGCAGAAGGCATGGAGGGA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAGTAGACCGTCTCTCCTaGCCGTGGTGGGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKVDRLS*PWWAQV
Trigger: CACCTGTGCCCACCACGGGCAGGAGAGACGGTCTAC...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGAGAACCTCCAGTAGCGCCCTCCTCCTGGGCAGTTGCCCCTTCACAGGTGCCGAATATTTCTCTCGGTaGCAAATTGGATTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LRTSSSALLLGSCPFTGAEYFSR*QIGLVV
Trigger: CACCACCAATCCAATTTGGCACCGAGAGAAATATTC...GGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGGAGGTTCTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGGAAGTCCCTGTGTCTaGGCCACTTGTGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIGSPCV*ATCGLI
Trigger: GATCAGCCCACAAGTGGCGCAGACACAGGGACTTCC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGGTTTCAGGAAACCGTaGGCTCTCAAGAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDGFRKP*ALKRGA
Trigger: TGCTCCTCTCTTGAGAGCGCACGGTTTCCTGAAACC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAGTGCACACGGATTCCTaGGACCCTTCGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKVHTDS*DPSAGP
Trigger: TGGCCCTGCCGAAGGGTCGCAGGAATCCGTGTGCAC...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGAGGCTCCCCCTCCGCTaGCAGACCTCCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWRLPLR*QTSPSS
Trigger: GGAGCTGGGGGAGGTCTGGCAGCGGAGGGGGAGCCT...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGGAGCTGTCGGTCGCTaGCACGTCGTGGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIGAVGR*HVVVLF
Trigger: AAACAGAACCACGACGTGGCAGCGACCGACAGCTCC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACGGTCGGTGTCGCTGTTaGCCCGCTGCAGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHGRCRC*PAAGSC
Trigger: ACATGACCCTGCAGCGGGCCAACAGCGACACCGACC...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACGTCTCTCCTGCCCGTaGTGGGCACAGGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKRLSCP*WAQVGK
Trigger: TTTCCCCACCTGTGCCCACCACGGGCAGGAGAGACG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGTCGTGATGGCTCCCTaGCATGTCCTCGTCATCGGA +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIVVMAP*HVLVIG
Trigger: TCCGATGACGAGGACATGCCAGGGAGCCATCACGAC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACAATCCTGACGTCCTCTaGGAGGTGAGGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDNPDVL*EVRSLK
Trigger: CTTCAAGGACCTCACCTCCCAGAGGACGTCAGGATT...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCTCCTCCAAGGAAGATaGGTAACCCAGGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDLLQGR*VTQVLL
Trigger: CAGCAAGACCTGGGTTACCCATCTTCCTTGGAGGAG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCACACTCTCTGTCCTaGCAGGATCACTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDSHSLS*QDHWVL
Trigger: CAGAACCCAGTGATCCTGCCAGGACAGAGAGTGTGA...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACCCTGGTCAGGTACAGTaGCCGATTCTGCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHPGQVQ*PILPLA
Trigger: GGCCAGGGGCAGAATCGGCCACTGTACCTGACCAGG...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AACCATGTCCTGGTACTGTGGCCTACTGACTGTATTGAATGTACTGGATGGCCTGCCTTCTTCTTGCGGTaGGCTCTCGGCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: NHVLVLWPTDCIECTGWPAFFLR*ALGSSC
Trigger: GCAGCTGCTGCCGAGAGCCCACCGCAAGAAGAAGGC...AGGCCATCCAGTACATTCAATACAGTCAGTAGGCCACAGTACCAGGACATGGTT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACCTTCACAGGTGCCTTaGGCCTCCCCAGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKPSQVP*ASPALP
Trigger: AGGCAGTGCTGGGGAGGCCCAAGGCACCTGTGAAGG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACCCTTCACAGGTGCCTTaGGCCTCCCCAGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHPSQVP*ASPALP
Trigger: AGGCAGTGCTGGGGAGGCCCAAGGCACCTGTGAAGG...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAGTAGCGCCCTCCTCCTaGGCAGTTGCCCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKVAPSS*AVAPSQ
Trigger: CTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTAC...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTAGCTGGGGTGGAGTAAGGCATGTGGAGGCACATACGACATTATCTCTTCTTGCGTGCCTCCCAGTTTaGTGGGAGAGCCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: SSWGGVRHVEAHTTLSLLACLPV*WESLVH
Trigger: GTGGACGAGGCTCTCCCACCAAACTGGGAGGCACGC...AAGAAGAGATAATGTCGTATGTGCCTCCACATGCCTTACTCCACCCCAGCTACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp TGTGTCTGCGCCACTTGTGGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCGTCGCTGCCACGTCGTaGTTCTGTTTACGTGATCCA +
Preference number: 4 (lower is better)
Translates to: CVCATCGLIYLLRATQFSVAATS*FCLRDP
Trigger: TGGATCACGTAAACAGAACCACGACGTGGCAGCGAC...GCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCCTCAGGCCTCTCATTaGTCATGGTTCTGCGGATAC +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDPQASH*SWFCGY
Trigger: GTATCCGCAGAACCATGACCAATGAGAGGCCTGAGG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGTGGTGCGGGAGTTGTaGTCCACAAAGAATGCCTTG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDVVREL*STKNAL
Trigger: CAAGGCATTCTTTGTGGACCACAACTCCCGCACCAC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGAACCAGCGCACTTGTaGGTCTACTGCTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDEPAHL*VYCSEV
Trigger: CACTTCAGAGCAGTAGACCCACAAGTGCGCTGGTTC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACACGGGAGAGCCACGTaGGGACTGACAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKHGRAT*GLTVAG
Trigger: CCCAGCTACTGTCAGTCCCCACGTGGCTCTCCCGTG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACCACGGGAGAGCCACGTaGGGACTGACAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHHGRAT*GLTVAG
Trigger: CCCAGCTACTGTCAGTCCCCACGTGGCTCTCCCGTG...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGACCGCTTGTAAGGGGCTaGAGCCCGGGCATTGGCACG +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRPLVRG*SPGIGT
Trigger: CGTGCCAATGCCCGGGCTCCAGCCCCTTACAAGCGG...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTATATTCTTGCGGGGTaGCACAACTGCTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDYILAG*HNCWAP
Trigger: AGGAGCCCAGCAGTTGTGCCACCCCGCAAGAATATA...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR CAA 72 bp GCGGATACTCTGATATCGCCGGTTCAGCTGCTCCATTaGCTGTATGGAGTTAGATCTCTGCAGCACCTGCGG +
Preference number: 4 (lower is better)
Translates to: ADTLISPVQLLH*LYGVRSLQHLR
Trigger: CCGCAGGTGCTGCAGAGATCTAACTCCATACAGCAAATGGAGCAGCTGAACCGGCGATATCAGAGTATCCGC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATCAGGTGCTCCCGGGCTaGACTAGCCATCCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNQVLPG*TSHPVC
Trigger: GCAGACGGGATGGCTAGTTCAGCCCGGGAGCACCTG...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGACTGGGTTCTTCACGGTaGTGCAGGGGGTCGTGGCTC +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRLGSSR*CRGSWL
Trigger: GAGCCACGACCCCCTGCATCACCGTGAAGAACCCAG...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTGCCAAGGTTGTAGCTaGGCATTTGATCACCGATGG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDCQGCS*AFDHRW
Trigger: CCATCGGTGATCAAATGCTCAGCTACAACCTTGGCA...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGGAGAGGCATCTTCATaGACAGAAGACGTAACCTCC +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDGEASS*TEDVTS
Trigger: GGAGGTTACGTCTTCTGTTCATGAAGATGCCTCTCC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260983.8
ENST00000644256.1
ENST00000644978.2
CDS-3UTR TCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCACACCTGGCTGTCGTaGTGGCTCCCTGGCATGTCC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVHTWLS*WLPGMS
Trigger: GGACATGCCAGGGAGCCATCACGACAGCCAGGTGTG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCCACACCTGGCTGTCGTaGTGGCTCCCTGGCATGTCC +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCHTWLS*WLPGMS
Trigger: GGACATGCCAGGGAGCCATCACGACAGCCAGGTGTG...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTCTTCGGCTTCCTCCTaGTGCATCGGAAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLISSASS*CIGSPC
Trigger: ACAGGGACTTCCGATGCATCAGGAGGAAGCCGAAGA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTGGTGGCCGTTGGCTTaGGAACCTCCAGTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVWWPLA*EPPVAP
Trigger: GGGCGCTACTGGAGGTTCTCAAGCCAACGGCCACCA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTCTGCACTGGCTTGGTaGAAGTCAGCTTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLISALAW*KSASSP
Trigger: AGGGGAGGAAGCTGACTTTCACCAAGCCAGTGCAGA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAGGAGCCGGGGATCAATaGAAGTGGTGGTGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKGAGDQ*KWWCGS
Trigger: ACTCCCGCACCACCACTTTCATTGATCCCCGGCTCC...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGAATTGACTCCAAGTATTGTGCCAACAGCTTCTGGAGAGGCATCCGATGGCTTGGAGCCGGGGATCAATaGAAGTGGTGGTGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: RIDSKYCANSFWRGIRWLGAGDQ*KWWCGS
Trigger: ACTCCCGCACCACCACTTTCATTGATCCCCGGCTCC...AAGCCATCGGATGCCTCTCCAGAAGCTGTTGGCACAATACTTGGAGTCAATTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACGTGGGTCTACTGCTCTaGAGTGGGAGCCGGGGATCA +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHVGLLL*SGSRGS
Trigger: TGATCCCCGGCTCCCACTTCAGAGCAGTAGACCCAC...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp GGCAGATCCAGACGGTTAAAACATGTATGCGCTCTGGGAAGAGCAGTGATTTTCGTGGGTCTACTGCTCTaGAGTGGGAGCCGGGGATCA +
Preference number: 4 (lower is better)
Translates to: GRSRRLKHVCALGRAVIFVGLLL*SGSRGS
Trigger: TGATCCCCGGCTCCCACTTCAGAGCAGTAGACCCAC...GAAAATCACTGCTCTTCCCAGAGCGCATACATGTTTTAACCGTCTGGATCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp CACTGGGCACCTGTACCACAGGTAAAGAACCAGCAGTGCACACGGATTCCTGCGTTCTCCCTGAGTGAGTaGTTCCTGGTAAGATCAGGT +
Preference number: 4 (lower is better)
Translates to: HWAPVPQVKNQQCTRIPAFSLSE*FLVRSG
Trigger: ACCTGATCTTACCAGGAATCACTCACTCAGGGAGAA...CGCAGGAATCCGTGTGCACTGCTGGTTCTTTACCTGTGGTACAGGTGCCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACGAGTTCTGAGGAGATaGCACGGGAGAGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKRVLRR*HGRATW
Trigger: CCACGTGGCTCTCCCGTGTCATCTCCTCAGAACTCG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCAATGCGTGCCTCCCAGTTTGGTGGGAGAGCCTCGTCCACCCTCTGGTACCGGGGTCACATAGAATTCTaGGAAGAGCCTTATAAAAGG +
Preference number: 4 (lower is better)
Translates to: SMRASQFGGRASSTLWYRGHIEF*EEPYKR
Trigger: CCTTTTATAAGGCTCTTCTCAGAATTCTATGTGACC...CCGGTACCAGAGGGTGGACGAGGCTCTCCCACCAAACTGGGAGGCACGCATTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCTAGAAGGCAGCTTCTaGACCTGCCTGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLILEGSF*TCLSTE
Trigger: CTCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGAGAACCTCCAGTAGCGCCCTCCTCCTGGGCAGTTGCCCCTTCACAGGTGCCGTTTCAAGATTCTCCTaGGTCCCTAAAAATTACCGT +
Preference number: 4 (lower is better)
Translates to: LRTSSSALLLGSCPFTGAVSRFS*VPKNYR
Trigger: ACGGTAATTTTTAGGGACTCAGGAGAATCTTGAAAC...GGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGGAGGTTCTCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCTGCCTACAAAGCTCTaGAGTCTCGCGTCCTCGGAA +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLILPTKL*SLASSE
Trigger: TTCCGAGGACGCGAGACTGCAGAGCTTTGTAGGCAG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260983.8
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGTAGACCGTCTCTCCTaGCCGTGGTGGGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVVDRLS*PWWAQV
Trigger: CACCTGTGCCCACCACGGGCAGGAGAGACGGTCTAC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCACACAGTTCAGCACTaGCCTGGTCAGCACTGGGTT +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIHTVQH*PGQHWV
Trigger: AACCCAGTGCTGACCAGGGCAGTGCTGAACTGTGTG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACTCCCTCAGGCCTGGTaGTGGCTTCGCTCACACTCT +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKLPQAW*WLRSHS
Trigger: AGAGTGTGAGCGAAGCCAGCACCAGGCCTGAGGGAG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGAATTGACTCCAAGTATTGTGCCAACAGCTTCTGGAGAGGCATCCGATGGCTTCTCCCTCAGGCCTGGTaGTGGCTTCGCTCACACTCT +
Preference number: 4 (lower is better)
Translates to: RIDSKYCANSFWRGIRWLLPQAW*WLRSHS
Trigger: AGAGTGTGAGCGAAGCCAGCACCAGGCCTGAGGGAG...AAGCCATCGGATGCCTCTCCAGAAGCTGTTGGCACAATACTTGGAGTCAATTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGCTGGTGGGCTCTGCTaGACAGGCTCCGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVAGGLC*TGSVFL
Trigger: GAGGAAGACGGAGCCTGTGCAGCAGAGCCCACCAGC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGTGCACACGGATTCCTaGGACCCTTCGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVVHTDS*DPSAGP
Trigger: TGGCCCTGCCGAAGGGTCGCAGGAATCCGTGTGCAC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CACTGGGCACCTGTACCACAGGTAAAGAACCAGCAGTGCACACGGATTCCTGCGGTTGAATCTTTCCACTaGAGCCCAGAACCACCGAAT +
Preference number: 4 (lower is better)
Translates to: HWAPVPQVKNQQCTRIPAVESFH*SPEPPN
Trigger: ATTCGGTGGTTCTGGGCTGCAGTGGAAAGATTCAAC...CGCAGGAATCCGTGTGCACTGCTGGTTCTTTACCTGTGGTACAGGTGCCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp GGTCACACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCCGGTTAAAACATGTATaGGCTCTGGGAAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: GHTLIAGAVSAFQVTLSLRLKHV*ALGRAV
Trigger: CACTGCTCTTCCCAGAGCGCATACATGTTTTAACCG...GAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGTGTGACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGGAGATTGGGCCAAATaGTGCCAGTTTGGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDGDWAK*CQFGLN
Trigger: GTTCAAGCCAAACTGGCAGCATTTGGCCCAATCTCC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCGCGGGGTGGCACAACTaGTGGGCTCCTCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCAGWHN*WAPLSS
Trigger: GGAGGAAAGAGGAGCCCAGCAGTTGTGCCACCCCGC...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTTCTCTGGGATTGGCTaGCTACAAAGAGACACAGGG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDFSGIG*LQRDTG
Trigger: CCCTGTGTCTCTTTGTAGGCAGCCAATCCCAGAGAA...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644256.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACAATGTGTACCGCATCTaGGGATTTCGACGCCTCACA +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDNVYRI*GFRRLT
Trigger: TGTGAGGCGTCGAAATCCCCAGATGCGGTACACATT...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCGTCTCTCCTGCCCGTaGTGGGCACAGGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVRLSCP*WAQVGK
Trigger: TTTCCCCACCTGTGCCCACCACGGGCAGGAGAGACG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGCATTTGATCACCGATaGCTTGTCGCTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIAFDHR*LVAPAA
Trigger: GGCTGCTGGAGCGACAAGCCATCGGTGATCAAATGC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp GCTGGGCCTGCAGGTAAGGAGCTCTCTGCAAGCTCTGGAAGATTTTCTGGCTTAAATCCTGACGTCCTCTaGGAGGTGAGGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: AGPAGKELSASSGRFSGLNPDVL*EVRSLK
Trigger: CTTCAAGGACCTCACCTCCCAGAGGACGTCAGGATT...TAAGCCAGAAAATCTTCCAGAGCTTGCAGAGAGCTCCTTACCTGCAGGCCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp AACCATGTCCTGGTACTGTGGCCTACTGACTGTATTGAATGTACTGGATGGCCTTCGCTGTCCCCGGCCTaGAGTGGCCATTGTGTTCGA +
Preference number: 4 (lower is better)
Translates to: NHVLVLWPTDCIECTGWPSLSPA*SGHCVR
Trigger: TCGAACACAATGGCCACTCCAGGCCGGGGACAGCGA...AGGCCATCCAGTACATTCAATACAGTCAGTAGGCCACAGTACCAGGACATGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACTCTCTCCCTCAGGCCTaGTGCTGGCTTCGCTCACAC +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHSLPQA*CWLRSH
Trigger: GTGTGAGCGAAGCCAGCACCAGGCCTGAGGGAGAGA...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AGTAGCTGGGGTGGAGTAAGGCATGTGGAGGCACATACGACATTATCTCTTCTTTCTCTCCCTCAGGCCTaGTGCTGGCTTCGCTCACAC +
Preference number: 4 (lower is better)
Translates to: SSWGGVRHVEAHTTLSLLSLPQA*CWLRSH
Trigger: GTGTGAGCGAAGCCAGCACCAGGCCTGAGGGAGAGA...AAGAAGAGATAATGTCGTATGTGCCTCCACATGCCTTACTCCACCCCAGCTACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCGGCAGGGCCACTGCTaGTGGGCTCTGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWRQGHC*WALLHR
Trigger: CCTGTGCAGCAGAGCCCACCAGCAGTGGCCCTGCCG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACGGCAGGGCCACTGCTaGTGGGCTCTGCTGCACAGG +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIRQGHC*WALLHR
Trigger: CCTGTGCAGCAGAGCCCACCAGCAGTGGCCCTGCCG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCTTCATCCTCCCCACTaGGCACCTGTACCACAGGTA +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLILHPPH*APVPQV
Trigger: TACCTGTGGTACAGGTGCCCAGTGGGGAGGATGAAG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGTCAGGTACAGTaGCCGATTCTGCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVPGQVQ*PILPLA
Trigger: GGCCAGGGGCAGAATCGGCCACTGTACCTGACCAGG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGCCTTCTTCTTGCGGTaGGCTCTCGGCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRAFFLR*ALGSSC
Trigger: GCAGCTGCTGCCGAGAGCCCACCGCAAGAAGAAGGC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCGCCTTCTTCTTGCGGTaGGCTCTCGGCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCAFFLR*ALGSSC
Trigger: GCAGCTGCTGCCGAGAGCCCACCGCAAGAAGAAGGC...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTTCACAGGTGCCTTaGGCCTCCCCAGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVPSQVP*ASPALP
Trigger: AGGCAGTGCTGGGGAGGCCCAAGGCACCTGTGAAGG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACTGCCTCCCAGTTTGGTaGGAGAGCCTCGTCCACCCT +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHCLPVW*ESLVHP
Trigger: AGGGTGGACGAGGCTCTCCCACCAAACTGGGAGGCA...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp ACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAGGCCTGCCTCTCATTGGTCATaGTTCTGCGGATACTCTGAT +
Preference number: 4 (lower is better)
Translates to: TLIAGAVSAFQVTLSLRPASHWS*FCGYSD
Trigger: ATCAGAGTATCCGCAGAACCATGACCAATGAGAGGC...AGGCCTGAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCACGGTGAAGAACTCTaGGCTGATGAGGAACTTCAC +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDHGEEL*ADEELH
Trigger: GTGAAGTTCCTCATCAGCCCAGAGTTCTTCACCGTG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTGGGCACCTGTACCACAGGTAAAGAACCAGCAGTGCACACGGATTCCTGCGGTCATTGTAAGCCACTaGAACCATGTCCTGGTACTG +
Preference number: 4 (lower is better)
Translates to: HWAPVPQVKNQQCTRIPAVIVSH*NHVLVL
Trigger: CAGTACCAGGACATGGTTCCAGTGGCTTACAATGAC...CGCAGGAATCCGTGTGCACTGCTGGTTCTTTACCTGTGGTACAGGTGCCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGGGACTGACAGTAGCTaGGGTGGAGTAAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIGTDSS*GGVRHV
Trigger: CACATGCCTTACTCCACCCCAGCTACTGTCAGTCCC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCTGGAGCCCGGGCATTaGCACGCTGGGTACCTGGCG +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWLEPGH*HAGYLA
Trigger: CGCCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATCCGCTTGTAAGGGGCTaGAGCCCGGGCATTGGCACG +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNPLVRG*SPGIGT
Trigger: CGTGCCAATGCCCGGGCTCCAGCCCCTTACAAGCGG...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTGGGCACCTGTACCACAGGTAAAGAACCAGCAGTGCACACGGATTCCTGCGAAACAGATACCAGCCTaGCATCCACCACCTCATAGA +
Preference number: 4 (lower is better)
Translates to: HWAPVPQVKNQQCTRIPAKQIPA*HPPPHR
Trigger: TCTATGAGGTGGTGGATGCCAGGCTGGTATCTGTTT...CGCAGGAATCCGTGTGCACTGCTGGTTCTTTACCTGTGGTACAGGTGCCCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGGCTGCCTACAAAGCTaGGCTTTGCGCCCGTCGCCA +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVGCLQS*ALRPSP
Trigger: TGGCGACGGGCGCAAAGCCCAGCTTTGTAGGCAGCC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644030.1
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCAGGTGCTCCCGGGCTaGACTAGCCATCCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWQVLPG*TSHPVC
Trigger: GCAGACGGGATGGCTAGTTCAGCCCGGGAGCACCTG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCAGGTGCTCCCGGGCTaGACTAGCCATCCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFQVLPG*TSHPVC
Trigger: GCAGACGGGATGGCTAGTTCAGCCCGGGAGCACCTG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGAGACTCGGTCTCACTaGCGGCTCTTCGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRETRSH*RLFGFL
Trigger: GAGGAAGCCGAAGAGCCGTCAGTGAGACCGAGTCTC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGAGACTCGGTCTCACTaGCGGCTCTTCGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVETRSH*RLFGFL
Trigger: GAGGAAGCCGAAGAGCCGTCAGTGAGACCGAGTCTC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGGAGCCGGGGATCAATaGAAGTGGTGGTGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRGAGDQ*KWWCGS
Trigger: ACTCCCGCACCACCACTTTCATTGATCCCCGGCTCC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGGAGCCGGGGATCAATaGAAGTGGTGGTGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVGAGDQ*KWWCGS
Trigger: ACTCCCGCACCACCACTTTCATTGATCCCCGGCTCC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCGAGTTCTGAGGAGATaGCACGGGAGAGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVRVLRR*HGRATW
Trigger: CCACGTGGCTCTCCCGTGTCATCTCCTCAGAACTCG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAGTACCTGGCGAGTTCTaGGGAGATGACACGGGAGAG +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKVPGEF*GDDTGE
Trigger: CTCTCCCGTGTCATCTCCTCAGAACTCGCCAGGTAC...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp GGCAGATCCAGACGGTTAAAACATGTATGCGCTCTGGGAAGAGCAGTGATTTTCGTACCTGGCGAGTTCTaGGGAGATGACACGGGAGAG +
Preference number: 4 (lower is better)
Translates to: GRSRRLKHVCALGRAVIFVPGEF*GDDTGE
Trigger: CTCTCCCGTGTCATCTCCTCAGAACTCGCCAGGTAC...GAAAATCACTGCTCTTCCCAGAGCGCATACATGTTTTAACCGTCTGGATCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCAAGGATCCTACCACTaGATCGGAACCATTCATGGT +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDQGSYH*IGTIHG
Trigger: ACCATGAATGGTTCCGATTCAGTGGTAGGATCCTTG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAGGCCTGCAGTCAAGAACTGTTaGTTGAAAGACGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: TLIAGAVSAFQVTLSLRPAVKNC*LKDGWV
Trigger: AACCCAACCGTCTTTCAATCAACAGTTCTTGACTGC...AGGCCTGAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp TCTGGAGAGGCATCCGATGGCTTGTCGCTCCAGCAGCCTCTGGACTGGAATGGTGCCCTTTTGTTTCCTTaGGAGTGCTTAAAAGGATAC +
Preference number: 4 (lower is better)
Translates to: SGEASDGLSLQQPLDWNGALLFP*ECLKGY
Trigger: GTATCCTTTTAAGCACTCTCAAGGAAACAAAAGGGC...ACCATTCCAGTCCAGAGGCTGCTGGAGCGACAAGCCATCGGATGCCTCTCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTTGAGCTCAAGAGTTTaGGACGTGCCTGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLILSSRV*DVPGPC
Trigger: ACAAGGCCCAGGCACGTCTCAAACTCTTGAGCTCAA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAAGGAGCAGCCAGAGCTaGACTGAAGTCAAGGCGGGT +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKRSSQS*TEVKAG
Trigger: ACCCGCCTTGACTTCAGTTCAGCTCTGGCTGCTCCT...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGTCTGCAGCCCCAGTTTaGTCCAGGCCCCAAGCTCCA +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLSAAPV*SRPQAP
Trigger: TGGAGCTTGGGGCCTGGAGCAAACTGGGGCTGCAGA...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260983.8
CDS-3UTR GCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGTCGCTGTTGGCCCGCTaGAGGGTCATGTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLSLLAR*RVMFSG
Trigger: GCCAGAGAACATGACCCTGCAGCGGGCCAACAGCGA...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGCGTGTACTCGTACATaGTGGCAGTTAAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIACTRT*WQLSWS
Trigger: GCTCCAGCTTAACTGCCAGCATGTACGAGTACACGC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTACTGCTGGTGGGCTCTaGTGCACAGGCTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVTAGGL*CTGSVF
Trigger: GAAGACGGAGCCTGTGCAGCAGAGCCCACCAGCAGT...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGTGCACACGGATTCCTaGGACCCTTCGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNVHTDS*DPSAGP
Trigger: TGGCCCTGCCGAAGGGTCGCAGGAATCCGTGTGCAC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGACTCCTCCTGGGCAGTTaGCCCTTCACAGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRLLLGS*PFTGAL
Trigger: CAAGGCACCTGTGAAGGGGCAACTGCCCAGGAGGAG...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAGGAGCTGTCGGTCGCTaGCACGTCGTGGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKGAVGR*HVVVLF
Trigger: AAACAGAACCACGACGTGGCAGCGACCGACAGCTCC...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGATCTCTGCAGCACCTaGGGGGCTGGGGGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIDLCST*GAGGAV
Trigger: GACAGCTCCCCCAGCCCCGCAGGTGCTGCAGAGATC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAATGGAGTTAGATCTCTaGAGCACCTGCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKMELDL*STCGAG
Trigger: CCCAGCCCCGCAGGTGCTGCAGAGATCTAACTCCAT...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGCACTAGGGTTAGAATaGAGCACGGTGAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDALGLE*STVKNS
Trigger: AGAGTTCTTCACCGTGCTGCATTCTAACCCTAGTGC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACGCACTGTGGCTGCGTTaGCTTGTCAGGTGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHALWLR*LVRCCR
Trigger: TCGGCAACACCTGACAAGGCAACGCAGCCACAGTGC...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCGGTTAAAACATGTATaGGCTCTGGGAAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDRLKHV*ALGRAV
Trigger: CACTGCTCTTCCCAGAGCGCATACATGTTTTAACCG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGAGAACCTCCAGTAGCGCCCTCCTCCTGGGCAGTTGCCCCTTCACAGGTGCCCACAGACCATCTTATTaGAAATCTGTAAAGGTACCT +
Preference number: 4 (lower is better)
Translates to: LRTSSSALLLGSCPFTGAHRPSY*KSVKVP
Trigger: AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTG...GGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGGAGGTTCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACTGGGAGGTGGAGGTTaGAGTGAGCTCATGTGCCAC +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKLGGGG*SELMCH
Trigger: GTGGCACATGAGCTCACTGCAACCTCCACCTCCCAG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGGCGGGGTGGCACAACTaGTGGGCTCCTCTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEAGWHN*WAPLSS
Trigger: GGAGGAAAGAGGAGCCCAGCAGTTGTGCCACCCCGC...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAATCATGTTCTCTGGCATaGAGCTCTGGGCGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKSCSLA*SSGRQG
Trigger: GCCTTGCCGCCCAGAGCTCCATGCCAGAGAACATGA...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCCAGGGTCATGTTCTCTaGCATGGAGCTCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCQGHVL*HGALGG
Trigger: GCCGCCCAGAGCTCCATGCCAGAGAACATGACCCTG...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCAGGGTCATGTTCTCTaGCATGGAGCTCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVQGHVL*HGALGG
Trigger: GCCGCCCAGAGCTCCATGCCAGAGAACATGACCCTG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCCCCATCATCACAGCTaGGTTCTTCACGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIPHHHS*VLHGDA
Trigger: TGCATCACCGTGAAGAACCCAGCTGTGATGATGGGG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACAGGTACCCACTCACGTaGTCAGCTGGGAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHRYPLT*SAGSLL
Trigger: CAGAAGGCTCCCAGCTGACCACGTGAGTGGGTACCT...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATCGCTGTCCCCGGCCTaGAGTGGCCATTGTGTTCGA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRSLSPA*SGHCVR
Trigger: TCGAACACAATGGCCACTCCAGGCCGGGGACAGCGA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTCGGAGAGGCACCCATaGACCTCTCAGAGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVSERHP*TSQSRS
Trigger: CGACCTGCTCTGAGAGGTCCATGGGTGCCTCTCCGA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCTCCTCCAAGGAAGATaGGTAACCCAGGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLILLQGR*VTQVLL
Trigger: CAGCAAGACCTGGGTTACCCATCTTCCTTGGAGGAG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACAAGCAGCTTCGTGTGTaGAGGCTTCCTCATTCTCAA +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDKQLRV*RLPHSQ
Trigger: TTGAGAATGAGGAAGCCTCCACACACGAAGCTGCTT...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATGCCCTGGTCAGCACTaGGTTGAGGCTCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNICPGQH*VEALGR
Trigger: GCGGCCCAGAGCCTCAACCCAGTGCTGACCAGGGCA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATCCTTCACAGGTGCCTTaGGCCTCCCCAGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNPSQVP*ASPALP
Trigger: AGGCAGTGCTGGGGAGGCCCAAGGCACCTGTGAAGG...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGCCTCGTCCACCCTCTaGTACCGGCTAACATCCTGG +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRASSTL*YRLTSW
Trigger: CCAGGATGTTAGCCGGTACCAGAGGGTGGACGAGGC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGCCTCGTCCACCCTCTaGTACCGGCTAACATCCTGG +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVASSTL*YRLTSW
Trigger: CCAGGATGTTAGCCGGTACCAGAGGGTGGACGAGGC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGCCTCTCATTGGTCATaGTTCTGCGGATACTCTGAT +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDASHWS*FCGYSD
Trigger: ATCAGAGTATCCGCAGAACCATGACCAATGAGAGGC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCCTGGGAAGAACTGGTaGTCCTGCATGTCGAGAATC +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIPGKNW*SCMSRI
Trigger: GATTCTCGACATGCAGGACCACCAGTTCTTCCCAGG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGGTTGGGTTGTTCCCTaGGCATCAAGCTCACCCAAA +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIGWVVP*ASSSPK
Trigger: TTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCAAATGCTGCCAGTTTaGCTTGAACCACGTTCAAGG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDQMLPV*LEPRSR
Trigger: CCTTGAACGTGGTTCAAGCCAAACTGGCAGCATTTG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACTGGGTTCTTCACGGTaGTGCAGGGGGTCGTGGCTC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNILGSSR*CRGSWL
Trigger: GAGCCACGACCCCCTGCATCACCGTGAAGAACCCAG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCCTGGGTTCTTCACGGTaGTGCAGGGGGTCGTGGCTC +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFLGSSR*CRGSWL
Trigger: GAGCCACGACCCCCTGCATCACCGTGAAGAACCCAG...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp ACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAGGCCTCATCTAAGTAATCATTaGGTGAATCCTGACGTCCTC +
Preference number: 4 (lower is better)
Translates to: TLIAGAVSAFQVTLSLRPHLSNH*VNPDVL
Trigger: GAGGACGTCAGGATTCACTCAATGATTACTTAGATG...AGGCCTGAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTGGTCAGCACTGGGTTaGGGCTCTGGGCCGCCTTCA +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFWSALG*GSGPPS
Trigger: TGAAGGCGGCCCAGAGCCTCAACCCAGTGCTGACCA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCGAAGGCTCAGAGCCCTaGTCGAGAGACTCGGTCTCA +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCEGSEP*SRDSVS
Trigger: TGAGACCGAGTCTCTCGATCAGGGCTCTGAGCCTTC...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACCGTCTTCCTCCTCCTaGGAAGAAAAGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKPSSSS*EEKAGV
Trigger: AACCCCAGCCTTTTCTTCTCAGGAGGAGGAAGACGG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTGGTGGCCGTTGGCTTaGGAACCTCCAGTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWWWPLA*EPPVAP
Trigger: GGGCGCTACTGGAGGTTCTCAAGCCAACGGCCACCA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGAATTGACTCCAAGTATTGTGCCAACAGCTTCTGGAGAGGCATCCGATGGCTTGATCTGGAGGTAGAGTaGGGCAGGATGTTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: RIDSKYCANSFWRGIRWLDLEVE*GRMFSR
Trigger: ACGGGAGAACATCCTGCCTCACTCTACCTCCAGATC...AAGCCATCGGATGCCTCTCCAGAAGCTGTTGGCACAATACTTGGAGTCAATTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGGAGCCGGGGATCAATaGAAGTGGTGGTGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNGAGDQ*KWWCGS
Trigger: ACTCCCGCACCACCACTTTCATTGATCCCCGGCTCC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGTGGGTCTACTGCTCTaGAGTGGGAGCCGGGGATCA +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNVGLLL*SGSRGS
Trigger: TGATCCCCGGCTCCCACTTCAGAGCAGTAGACCCAC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGTCAGGTGTTGCCGATaGACCAGCGCACTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRVRCCR*TSALVG
Trigger: ACCCACAAGTGCGCTGGTTCATCGGCAACACCTGAC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAAAGGTCTGCATCGCTTaGAAGGCGCACCAATCCTGG +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKKVCIA*KAHQSW
Trigger: CCAGGATTGGTGCGCCTTTCAAGCGATGCAGACCTT...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCCTCCCCAACGAAGGTaGCATATAGCTTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDPPQRR*HIAYFS
Trigger: AGAGAAATAAGCTATATGTCACCTTCGTTGGGGAGG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCGGAACCATTCATGGTaGTTGTCTACAAAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDRNHSW*LSTKAD
Trigger: GTCTGCTTTTGTAGACAATCACCATGAATGGTTCCG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGTTACTCCCTCGGAGTaGAGCAAATCCTTCATAGGG +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIVTPSE*SKSFIG
Trigger: CCCTATGAAGGATTTGCTTCACTCCGAGGGAGTAAC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp GGCAGATCCAGACGGTTAAAACATGTATGCGCTCTGGGAAGAGCAGTGATTTTCCTAGAAGGCAGCTTCTaGACCTGCCTGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: GRSRRLKHVCALGRAVIFLEGSF*TCLSTE
Trigger: CTCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAG...GAAAATCACTGCTCTTCCCAGAGCGCATACATGTTTTAACCGTCTGGATCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp ACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAGGCCTAAATTACCGTGGAGCTaGTCATGTATGGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: TLIAGAVSAFQVTLSLRPKLPWS*SCMGSS
Trigger: AGATGAACCCATACATGATCAGCTCCACGGTAATTT...AGGCCTGAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGGATACATATTAGCATaGTGCCCGAGTATGCATGGA +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDGYILA*CPSMHG
Trigger: TCCATGCATACTCGGGCATCATGCTAATATGTATCC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGGTGGGAGGCTGGCTTaGGCCTGGAAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFGGRLA*AWKAEV
Trigger: AACCTCTGCCTTCCAGGCTCAAGCCAGCCTCCCACC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACAATCCATCAGTCAAATaGGACTTAGGCAGCAGCAAG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDNPSVK*DLGSSK
Trigger: CTTGCTGCTGCCTAAGTCTCATTTGACTGATGGATT...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAATGAGGTTCTGGGCTTaGCCCAGCGTGTACTCGTAC +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKMRFWA*PSVYSY
Trigger: GTACGAGTACACGCTGGGGCAAGCCCAGAACCTCAT...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR GCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACACACAGTTCAGCACTaGCCTGGTCAGCACTGGGTT +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKHTVQH*PGQHWV
Trigger: AACCCAGTGCTGACCAGGGCAGTGCTGAACTGTGTG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTGGTCACACTCTCATTaGAGGAGCTGTCAGCGCATT +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIWSHSH*RSCQRI
Trigger: AATGCGCTGACAGCTCCTGCAATGAGAGTGTGACCA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGCTGGTGGGCTCTGCTaGACAGGCTCCGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFAGGLC*TGSVFL
Trigger: GAGGAAGACGGAGCCTGTGCAGCAGAGCCCACCAGC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGCTGGTGGGCTCTGCTaGACAGGCTCCGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIAGGLC*TGSVFL
Trigger: GAGGAAGACGGAGCCTGTGCAGCAGAGCCCACCAGC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATACTGCTGGTGGGCTCTaGTGCACAGGCTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNTAGGL*CTGSVF
Trigger: GAAGACGGAGCCTGTGCAGCAGAGCCCACCAGCAGT...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGTGCACACGGATTCCTaGGACCCTTCGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFVHTDS*DPSAGP
Trigger: TGGCCCTGCCGAAGGGTCGCAGGAATCCGTGTGCAC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATACAGTGGCCGATTCTaGCCCTGGCCCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRYSGRF*PWPFIL
Trigger: GAGGATGAAGGGCCAGGGGCAGAATCGGCCACTGTA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTAGGCTCCCCCTCCGCTaGCAGACCTCCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPRLPLR*QTSPSS
Trigger: GGAGCTGGGGGAGGTCTGGCAGCGGAGGGGGAGCCT...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATCTCCTCCTGGGCAGTTaGCCCTTCACAGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNLLLGS*PFTGAL
Trigger: CAAGGCACCTGTGAAGGGGCAACTGCCCAGGAGGAG...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGTGGCTGTCAATGCGTaGCTCCCAGTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRVAVNA*LPVWWE
Trigger: CTCCCACCAAACTGGGAGGCACGCATTGACAGCCAC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGTGGCTGTCAATGCGTaGCTCCCAGTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVVAVNA*LPVWWE
Trigger: CTCCCACCAAACTGGGAGGCACGCATTGACAGCCAC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGGAGCTGTCGGTCGCTaGCACGTCGTGGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVGAVGR*HVVVLF
Trigger: AAACAGAACCACGACGTGGCAGCGACCGACAGCTCC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGATGGAGTTAGATCTCTaGAGCACCTGCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLMELDL*STCGAG
Trigger: CCCAGCCCCGCAGGTGCTGCAGAGATCTAACTCCAT...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTATCGCCGGTTCAGCTaGTCCATTTGCTGTATGGAG +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIYRRFS*SICCME
Trigger: CTCCATACAGCAAATGGAGCAGCTGAACCGGCGATA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp GCTGGGCCTGCAGGTAAGGAGCTCTCTGCAAGCTCTGGAAGATTTTCTGGCTTAGCACTAGGGTTAGAATaGAGCACGGTGAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: AGPAGKELSASSGRFSGLALGLE*STVKNS
Trigger: AGAGTTCTTCACCGTGCTGCATTCTAACCCTAGTGC...TAAGCCAGAAAATCTTCCAGAGCTTGCAGAGAGCTCCTTACCTGCAGGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCCACAAAGAATGCCTTaGCCTGGTGATCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDPQRMP*PGDHVS
Trigger: TGAAACATGATCACCAGGGCAAGGCATTCTTTGTGG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACACTAAGCTCTCTGTTTaGTGTACAACACCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDTKLSV*CTTPLS
Trigger: TGAGAGGGGTGTTGTACAGCAAACAGAGAGCTTAGT...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTATTTCAGCTGTGCCTaGGATGACCAATTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDYFSCA*DDQFQF
Trigger: GAACTGGAATTGGTCATCGCAGGCACAGCTGAAATA...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ACCTGTACCACAGGTAAAGAACCAGCAGTGCACACGGATTCCTGCGACCCTTCGTATTTCAGCTGTGCCTaGGATGACCAATTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: TCTTGKEPAVHTDSCDPSYFSCA*DDQFQF
Trigger: GAACTGGAATTGGTCATCGCAGGCACAGCTGAAATA...CGAAGGGTCGCAGGAATCCGTGTGCACTGCTGGTTCTTTACCTGTGGTACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp AACCATGTCCTGGTACTGTGGCCTACTGACTGTATTGAATGTACTGGATGGCCTCTTCACGGATGCTCCTaGTTCTCTTCCTCTTCCCCC +
Preference number: 4 (lower is better)
Translates to: NHVLVLWPTDCIECTGWPLHGCS*FSSSSP
Trigger: GGGGGAAGAGGAAGAGAAGCAGGAGCATCCGTGAAG...AGGCCATCCAGTACATTCAATACAGTCAGTAGGCCACAGTACCAGGACATGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTGGGCGGCAAGGCTCTaGAGGTTCTCTGGGCTCAAT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVWAARL*RFSGLN
Trigger: ATTGAGCCCAGAGAACCTCCAGAGCCTTGCCGCCCA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTCTGGCATGGAGCTCTaGGCGGCAAGGCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWSGMEL*AARLWR
Trigger: CCTCCAGAGCCTTGCCGCCCAGAGCTCCATGCCAGA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGTCATGTTCTCTGGCATaGAGCTCTGGGCGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLSCSLA*SSGRQG
Trigger: GCCTTGCCGCCCAGAGCTCCATGCCAGAGAACATGA...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGGTCGGTGTCGCTGTTaGCCCGCTGCAGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWGRCRC*PAAGSC
Trigger: ACATGACCCTGCAGCGGGCCAACAGCGACACCGACC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCTCTCCTGCCCGTGGTaGGCACAGGTGGGGAAACTG +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWLSCPW*AQVGKL
Trigger: CAGTTTCCCCACCTGTGCCCACCACGGGCAGGAGAG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACGTCTCTCCTGCCCGTaGTGGGCACAGGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIRLSCP*WAQVGK
Trigger: TTTCCCCACCTGTGCCCACCACGGGCAGGAGAGACG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTAGGTACCCACTCACGTaGTCAGCTGGGAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVRYPLT*SAGSLL
Trigger: CAGAAGGCTCCCAGCTGACCACGTGAGTGGGTACCT...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGTCCCCGGCCTGGAGTaGCCATTGTGTTCGATAGCA +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVVPGLE*PLCSIA
Trigger: TGCTATCGAACACAATGGCCACTCCAGGCCGGGGAC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTCGCTGTCCCCGGCCTaGAGTGGCCATTGTGTTCGA +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNSLSPA*SGHCVR
Trigger: TCGAACACAATGGCCACTCCAGGCCGGGGACAGCGA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACTTCATCCTCCCCACTaGGCACCTGTACCACAGGTA +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKLHPPH*APVPQV
Trigger: TACCTGTGGTACAGGTGCCCAGTGGGGAGGATGAAG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCCTGGTCAGGTACAGTaGCCGATTCTGCCCCTGGCC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWPGQVQ*PILPLA
Trigger: GGCCAGGGGCAGAATCGGCCACTGTACCTGACCAGG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCGCCTTCTTCTTGCGGTaGGCTCTCGGCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFAFFLR*ALGSSC
Trigger: GCAGCTGCTGCCGAGAGCCCACCGCAAGAAGAAGGC...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGCCTTCTTCTTGCGGTaGGCTCTCGGCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFAFFLR*ALGSSC
Trigger: GCAGCTGCTGCCGAGAGCCCACCGCAAGAAGAAGGC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCCTTCACAGGTGCCTTaGGCCTCCCCAGCACTGCCT +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFPSQVP*ASPALP
Trigger: AGGCAGTGCTGGGGAGGCCCAAGGCACCTGTGAAGG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGTAGCGCCCTCCTCCTaGGCAGTTGCCCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFVAPSS*AVAPSQ
Trigger: CTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTAC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGTAGCGCCCTCCTCCTaGGCAGTTGCCCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWVAPSS*AVAPSQ
Trigger: CTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTAC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGCCTCGTCCACCCTCTaGTACCGGCTAACATCCTGG +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNASSTL*YRLTSW
Trigger: CCAGGATGTTAGCCGGTACCAGAGGGTGGACGAGGC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTGCCTCCCAGTTTGGTaGGAGAGCCTCGTCCACCCT +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNCLPVW*ESLVHP
Trigger: AGGGTGGACGAGGCTCTCCCACCAAACTGGGAGGCA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGTGCCTCCCAGTTTGGTaGGAGAGCCTCGTCCACCCT +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEECLPVW*ESLVHP
Trigger: AGGGTGGACGAGGCTCTCCCACCAAACTGGGAGGCA...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATACCTCACCCGCACTGTaGCTGCGTTGCCTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNTSPAL*LRCLVR
Trigger: CCTGACAAGGCAACGCAGCCACAGTGCGGGTGAGGT...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCACTGCCCTGGTCAGCACTTCAGTTCGGATAAATTaGATCTTCTCCCTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: GLIYLLRATQFSTALVSTSVRIN*IFSLSE
Trigger: CTCACTCAGGGAGAAGATCCAATTTATCCGAACTGA...AGTGCTGACCAGGGCAGTGCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCACGGGAGAGCCACGTaGGGACTGACAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWHGRAT*GLTVAG
Trigger: CCCAGCTACTGTCAGTCCCCACGTGGCTCTCCCGTG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCACGGGAGAGCCACGTaGGGACTGACAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFHGRAT*GLTVAG
Trigger: CCCAGCTACTGTCAGTCCCCACGTGGCTCTCCCGTG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTCTGGAGCCCGGGCATTaGCACGCTGGGTACCTGGCG +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTLEPGH*HAGYLA
Trigger: CGCCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAG...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAGCCTGTCCACAGAGATaGGCATTCAGCTTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKACPQR*AFSFQV
Trigger: GACCTGGAAGCTGAATGCCCATCTCTGTGGACAGGC...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCACTGCCCTGGTCAGCACTGGAGCTGATCATGTATaGGTTCATCTTTGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: GLIYLLRATQFSTALVSTGADHV*VHLCLG
Trigger: TCCAAGACAAAGATGAACCCATACATGATCAGCTCC...AGTGCTGACCAGGGCAGTGCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp GCTGGGCCTGCAGGTAAGGAGCTCTCTGCAAGCTCTGGAAGATTTTCTGGCTTACAAATGCTGCCAGTTTaGCTTGAACCACGTTCAAGG +
Preference number: 4 (lower is better)
Translates to: AGPAGKELSASSGRFSGLQMLPV*LEPRSR
Trigger: CCTTGAACGTGGTTCAAGCCAAACTGGCAGCATTTG...TAAGCCAGAAAATCTTCCAGAGCTTGCAGAGAGCTCCTTACCTGCAGGCCCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CAA 72 bp GGAACCATGTCCTGGTACTGTGGCCTACTGACTGTATaGAATGTACTGGATGGCCTGGGAAGAACTGGTGGT +
Preference number: 4 (lower is better)
Translates to: GTMSWYCGLLTV*NVLDGLGRTGG
Trigger: ACCACCAGTTCTTCCCAGGCCATCCAGTACATTCAATACAGTCAGTAGGCCACAGTACCAGGACATGGTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp TGTGTCTGCGCCACTTGTGGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCCTCCATTCACAGAATTaGCTCCAAGTATTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: CVCATCGLIYLLRATQFSLHSQN*LQVLCQ
Trigger: TTGGCACAATACTTGGAGTCAATTCTGTGAATGGAG...GCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACGGAGCTAGTCCTGAATaGATGCTTGGGGGTTCCATC +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHGASPE*MLGGSI
Trigger: GATGGAACCCCCAAGCATTCATTCAGGACTAGCTCC...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAGGAGCTAGTCCTGAATaGATGCTTGGGGGTTCCATC +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKGASPE*MLGGSI
Trigger: GATGGAACCCCCAAGCATTCATTCAGGACTAGCTCC...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAATCATTGAGTGAATCCTaGCGTCCTCTGGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKSLSES*RPLGGE
Trigger: CTCACCTCCCAGAGGACGTCAGGATTCACTCAATGA...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCTGGAGAGGCATCCGATGGCTTGTCGCTCCAGCAGCCTCTGGACTGGAATGGTTCATCTGAATCAATATaGAGCATGGCATTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: SGEASDGLSLQQPLDWNGSSESI*SMALSL
Trigger: AAGACTCAATGCCATGCTTCATATTGATTCAGATGA...ACCATTCCAGTCCAGAGGCTGCTGGAGCGACAAGCCATCGGATGCCTCTCCAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCTCTTCGGCTTCCTCCTaGTGCATCGGAAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCSSASS*CIGSPC
Trigger: ACAGGGACTTCCGATGCATCAGGAGGAAGCCGAAGA...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGAGACTCGGTCTCACTaGCGGCTCTTCGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWETRSH*RLFGFL
Trigger: GAGGAAGCCGAAGAGCCGTCAGTGAGACCGAGTCTC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGAGACTCGGTCTCACTaGCGGCTCTTCGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIETRSH*RLFGFL
Trigger: GAGGAAGCCGAAGAGCCGTCAGTGAGACCGAGTCTC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCGTCTTCCTCCTCCTaGGAAGAAAAGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVPSSSS*EEKAGV
Trigger: AACCCCAGCCTTTTCTTCTCAGGAGGAGGAAGACGG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTCTGCACTGGCTTGGTaGAAGTCAGCTTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVSALAW*KSASSP
Trigger: AGGGGAGGAAGCTGACTTTCACCAAGCCAGTGCAGA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGATCTGGAGGTAGAGTaGGGCAGGATGTTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVDLEVE*GRMFSR
Trigger: ACGGGAGAACATCCTGCCTCACTCTACCTCCAGATC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGATCTGGAGGTAGAGTaGGGCAGGATGTTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRDLEVE*GRMFSR
Trigger: ACGGGAGAACATCCTGCCTCACTCTACCTCCAGATC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AACCATGTCCTGGTACTGTGGCCTACTGACTGTATTGAATGTACTGGATGGCCTCCCTCCGGACTTTGGTaGTCATGTGCTTCAAACACG +
Preference number: 4 (lower is better)
Translates to: NHVLVLWPTDCIECTGWPPSGLW*SCASNT
Trigger: CGTGTTTGAAGCACATGATCACCAAAGTCCGGAGGG...AGGCCATCCAGTACATTCAATACAGTCAGTAGGCCACAGTACCAGGACATGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGTCAGGTGTTGCCGATaGACCAGCGCACTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNVRCCR*TSALVG
Trigger: ACCCACAAGTGCGCTGGTTCATCGGCAACACCTGAC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCTGGAGAGGCATCCGATGGCTTGTCGCTCCAGCAGCCTCTGGACTGGAATGGTTCAAAGATATTGGGTTaGCGTAGAAATGCAACAATC +
Preference number: 4 (lower is better)
Translates to: SGEASDGLSLQQPLDWNGSKILG*RRNATI
Trigger: GATTGTTGCATTTCTACGTCAACCCAATATCTTTGA...ACCATTCCAGTCCAGAGGCTGCTGGAGCGACAAGCCATCGGATGCCTCTCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGAAGGTCTGCATCGCTTaGAAGGCGCACCAATCCTGG +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLKVCIA*KAHQSW
Trigger: CCAGGATTGGTGCGCCTTTCAAGCGATGCAGACCTT...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCGAGTTCTGAGGAGATaGCACGGGAGAGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWRVLRR*HGRATW
Trigger: CCACGTGGCTCTCCCGTGTCATCTCCTCAGAACTCG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCGAGTTCTGAGGAGATaGCACGGGAGAGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFRVLRR*HGRATW
Trigger: CCACGTGGCTCTCCCGTGTCATCTCCTCAGAACTCG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGTACCTGGCGAGTTCTaGGGAGATGACACGGGAGAG +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNVPGEF*GDDTGE
Trigger: CTCTCCCGTGTCATCTCCTCAGAACTCGCCAGGTAC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAATCCAGTCCCCAAATGTaGCAGAGCACTTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKSSPQM*QSTCSW
Trigger: CCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGA...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACAAATTACCGTGGAGCTaGTCATGTATGGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDKLPWS*SCMGSS
Trigger: AGATGAACCCATACATGATCAGCTCCACGGTAATTT...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGCCATCTTATTCTGCTaGGCTGTTCAATTACGAAAG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDAILFC*AVQLRK
Trigger: CTTTCGTAATTGAACAGCTCAGCAGAATAAGATGGC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATCAGCCAGAGCTGAACTaGAGTCAAGGCGGGTCTGGA +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNQPELN*SQGGSG
Trigger: TCCAGACCCGCCTTGACTTCAGTTCAGCTCTGGCTG...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAACTAGCCATCCCGTCTaGTTCTCTGGGATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRTSHPV*FSGIGC
Trigger: GCAGCCAATCCCAGAGAAGCAGACGGGATGGCTAGT...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR GCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGCTCACAAAAAGCAGGTaGTCCCGGGCTGAACTAGCC +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLLTKSR*SRAELA
Trigger: GGCTAGTTCAGCCCGGGAGCACCTGCTTTTTGTGAG...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTCGCTGTTGGCCCGCTaGAGGGTCATGTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFSLLAR*RVMFSG
Trigger: GCCAGAGAACATGACCCTGCAGCGGGCCAACAGCGA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR GCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACGCGTGTACTCGTACATaGTGGCAGTTAAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHACTRT*WQLSWS
Trigger: GCTCCAGCTTAACTGCCAGCATGTACGAGTACACGC...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAGCGTGTACTCGTACATaGTGGCAGTTAAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKACTRT*WQLSWS
Trigger: GCTCCAGCTTAACTGCCAGCATGTACGAGTACACGC...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTATGAGGTTCTGGGCTTaGCCCAGCGTGTACTCGTAC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVMRFWA*PSVYSY
Trigger: GTACGAGTACACGCTGGGGCAAGCCCAGAACCTCAT...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR GCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTCCCTCCATGCCTTCTaGCCCCATCATCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNSLHAF*PHHHSW
Trigger: CCAGCTGTGATGATGGGGGCAGAAGGCATGGAGGGA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGAATATTTCTCTCGGTaGCAAATTGGATTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDEYFSR*QIGLVV
Trigger: CACCACCAATCCAATTTGGCACCGAGAGAAATATTC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCACACAGTTCAGCACTaGCCTGGTCAGCACTGGGTT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVHTVQH*PGQHWV
Trigger: AACCCAGTGCTGACCAGGGCAGTGCTGAACTGTGTG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCTCCCTCAGGCCTGGTaGTGGCTTCGCTCACACTCT +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWLPQAW*WLRSHS
Trigger: AGAGTGTGAGCGAAGCCAGCACCAGGCCTGAGGGAG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACTCCCTCAGGCCTGGTaGTGGCTTCGCTCACACTCT +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNILPQAW*WLRSHS
Trigger: AGAGTGTGAGCGAAGCCAGCACCAGGCCTGAGGGAG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGACTGCTGGTGGGCTCTaGTGCACAGGCTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWTAGGL*CTGSVF
Trigger: GAAGACGGAGCCTGTGCAGCAGAGCCCACCAGCAGT...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATAGGCTCCCCCTCCGCTaGCAGACCTCCCCCAGCTCC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHRLPLR*QTSPSS
Trigger: GGAGCTGGGGGAGGTCTGGCAGCGGAGGGGGAGCCT...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTTCAGCTGCTCCATTTaGTGTATGGAGTTAGATCTC +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDFSCSI*CMELDL
Trigger: GAGATCTAACTCCATACAGCAAATGGAGCAGCTGAA...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGCACTAGGGTTAGAATaGAGCACGGTGAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIALGLE*STVKNS
Trigger: AGAGTTCTTCACCGTGCTGCATTCTAACCCTAGTGC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGCACTGTGGCTGCGTTaGCTTGTCAGGTGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNALWLR*LVRCCR
Trigger: TCGGCAACACCTGACAAGGCAACGCAGCCACAGTGC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACAGCGGAAACCTATGGTaGACACCATGCAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHSGNLW*TPCRHS
Trigger: TGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCT...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGAGCTCATGTGCCACTaGACTCCAGCCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVELMCH*TPAWMT
Trigger: TGTCATCCAGGCTGGAGTGCAGTGGCACATGAGCTC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACTCCCGTCTGCTTCTCTaGGATTGGCTGCCTACAAAG +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHSRLLL*DWLPTK
Trigger: CTTTGTAGGCAGCCAATCCCAGAGAAGCAGACGGGA...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAGCTCTGGAGGTTCTCTaGGCTCAATGTGTACCGCAT +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKALEVL*AQCVPH
Trigger: ATGCGGTACACATTGAGCCCAGAGAACCTCCAGAGC...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGCATTTGATCACCGATaGCTTGTCGCTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVAFDHR*LVAPAA
Trigger: GGCTGCTGGAGCGACAAGCCATCGGTGATCAAATGC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTACTCACGTGGTCAGCTaGGAGCCTTCTGCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVTHVVS*EPSAKV
Trigger: AACCTTGGCAGAAGGCTCCCAGCTGACCACGTGAGT...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAACTCACGTGGTCAGCTaGGAGCCTTCTGCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRTHVVS*EPSAKV
Trigger: AACCTTGGCAGAAGGCTCCCAGCTGACCACGTGAGT...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGGTCCCCGGCCTGGAGTaGCCATTGTGTTCGATAGCA +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEVPGLE*PLCSIA
Trigger: TGCTATCGAACACAATGGCCACTCCAGGCCGGGGAC...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATCGGAGAGGCACCCATaGACCTCTCAGAGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNISERHP*TSQSRS
Trigger: CGACCTGCTCTGAGAGGTCCATGGGTGCCTCTCCGA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCAAGCAGCTTCGTGTGTaGAGGCTTCCTCATTCTCAA +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIKQLRV*RLPHSQ
Trigger: TTGAGAATGAGGAAGCCTCCACACACGAAGCTGCTT...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGACTGGGTTGAGGCTCTaGGCCGCCTTCACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWTGLRL*AAFTFL
Trigger: GAGGAAGGTGAAGGCGGCCCAGAGCCTCAACCCAGT...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACCTCAGGCCTGGTGCTaGCTTCGCTCACACTCTCTG +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIPQAWC*LRSHSL
Trigger: CAGAGAGTGTGAGCGAAGCCAGCACCAGGCCTGAGG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGCAGAGGACAGCTGCGTaGTCACACTCTCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLQRTAA*SHSHCR
Trigger: CCTGCAATGAGAGTGTGACCACGCAGCTGTCCTCTG...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGCTTCATCCTCCCCACTaGGCACCTGTACCACAGGTA +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLLHPPH*APVPQV
Trigger: TACCTGTGGTACAGGTGCCCAGTGGGGAGGATGAAG...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTGCCTCCCAGTTTGGTaGGAGAGCCTCGTCCACCCT +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWCLPVW*ESLVHP
Trigger: AGGGTGGACGAGGCTCTCCCACCAAACTGGGAGGCA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGTCGGAAATCTGCACTaGCTTGGTGAAAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIVGNLH*LGESQL
Trigger: AAGCTGACTTTCACCAAGCCAGTGCAGATTTCCGAC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAACCTCACCCGCACTGTaGCTGCGTTGCCTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNITSPAL*LRCLVR
Trigger: CCTGACAAGGCAACGCAGCCACAGTGCGGGTGAGGT...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTGGCCTGGGAAGAACTaGTGGTCCTGCATGTCGAGA +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVWPGKN*WSCMSR
Trigger: TCTCGACATGCAGGACCACCAGTTCTTCCCAGGCCA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATGGCCTGGGAAGAACTaGTGGTCCTGCATGTCGAGA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRWPGKN*WSCMSR
Trigger: TCTCGACATGCAGGACCACCAGTTCTTCCCAGGCCA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGTCATTGTAAGCCACTaGAACCATGTCCTGGTACTG +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIVIVSH*NHVLVL
Trigger: CAGTACCAGGACATGGTTCCAGTGGCTTACAATGAC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCGGGACTGACAGTAGCTaGGGTGGAGTAAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCGTDSS*GGVRHV
Trigger: CACATGCCTTACTCCACCCCAGCTACTGTCAGTCCC...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGGGACTGACAGTAGCTaGGGTGGAGTAAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVGTDSS*GGVRHV
Trigger: CACATGCCTTACTCCACCCCAGCTACTGTCAGTCCC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGGGACTGACAGTAGCTaGGGTGGAGTAAGGCATGTG +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRGTDSS*GGVRHV
Trigger: CACATGCCTTACTCCACCCCAGCTACTGTCAGTCCC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGCCTGTCCACAGAGATaGGCATTCAGCTTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVACPQR*AFSFQV
Trigger: GACCTGGAAGCTGAATGCCCATCTCTGTGGACAGGC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ACCTGTACCACAGGTAAAGAACCAGCAGTGCACACGGATTCCTGCGACCCTTCGTGTAAACCCATAGGCTaGCAAACCATATGTCAATCC +
Preference number: 4 (lower is better)
Translates to: TCTTGKEPAVHTDSCDPSCKPIG*QTICQS
Trigger: GGATTGACATATGGTTTGCCAGCCTATGGGTTTACA...CGAAGGGTCGCAGGAATCCGTGTGCACTGCTGGTTCTTTACCTGTGGTACAGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACCACTGCACTCCAGCATaGGTGACAGCCAGACCTTAT +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHHCTPA*VTARPY
Trigger: ATAAGGTCTGGCTGTCACCCATGCTGGAGTGCAGTG...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACAAGATGGAAGTAAAATaGCTAAGGTCCAGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDKMEVK*LRSRVL
Trigger: CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTT...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCAGGTGCTCCCGGGCTaGACTAGCCATCCCGTCTGC +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPQVLPG*TSHPVC
Trigger: GCAGACGGGATGGCTAGTTCAGCCCGGGAGCACCTG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATCATTGAGTGAATCCTaGCGTCCTCTGGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRSLSES*RPLGGE
Trigger: CTCACCTCCCAGAGGACGTCAGGATTCACTCAATGA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTCTTCGGCTTCCTCCTaGTGCATCGGAAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNSSASS*CIGSPC
Trigger: ACAGGGACTTCCGATGCATCAGGAGGAAGCCGAAGA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATCCGTCTTCCTCCTCCTaGGAAGAAAAGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNPSSSS*EEKAGV
Trigger: AACCCCAGCCTTTTCTTCTCAGGAGGAGGAAGACGG...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTTGGTGGCCGTTGGCTTaGGAACCTCCAGTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTWWPLA*EPPVAP
Trigger: GGGCGCTACTGGAGGTTCTCAAGCCAACGGCCACCA...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGCCCTCCGGACTTTGGTaGTCATGTGCTTCAAACACG +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLPSGLW*SCASNT
Trigger: CGTGTTTGAAGCACATGATCACCAAAGTCCGGAGGG...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTGTTCGCGAACATGTTaGGGAATCCCACAAGGTCGC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVCSRTC*GIPQGR
Trigger: GCGACCTTGTGGGATTCCTCAACATGTTCGCGAACA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGTCAGGTGTTGCCGATaGACCAGCGCACTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWVRCCR*TSALVG
Trigger: ACCCACAAGTGCGCTGGTTCATCGGCAACACCTGAC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGTCAGGTGTTGCCGATaGACCAGCGCACTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFVRCCR*TSALVG
Trigger: ACCCACAAGTGCGCTGGTTCATCGGCAACACCTGAC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCTGGTAAGATCAGGTTaGCGCTCCTGTAGAATTTCA +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLILVRSG*RSCRIS
Trigger: TGAAATTCTACAGGAGCGTCAACCTGATCTTACCAG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCCTCCCCAACGAAGGTaGCATATAGCTTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIPPQRR*HIAYFS
Trigger: AGAGAAATAAGCTATATGTCACCTTCGTTGGGGAGG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGGTCACATAGAATTCTaGGAAGAGCCTTATAAAAGG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDGHIEF*EEPYKR
Trigger: CCTTTTATAAGGCTCTTCTCAGAATTCTATGTGACC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATCTAGAAGGCAGCTTCTaGACCTGCCTGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNLEGSF*TCLSTE
Trigger: CTCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAG...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGTTTCAAGATTCTCCTaGGTCCCTAAAAATTACCGT +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDVSRFS*VPKNYR
Trigger: ACGGTAATTTTTAGGGACTCAGGAGAATCTTGAAAC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCACCCTACAAAGTGCGTaGGGAGCTAAACGGACGATG +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCTLQSA*GAKRTM
Trigger: CATCGTCCGTTTAGCTCCTCACGCACTTTGTAGGGT...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGCCACAAGCCATCCATaGAAATCAGCCACAACCCAG +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRATSHP*KSATTQ
Trigger: CTGGGTTGTGGCTGATTTTCATGGATGGCTTGTGGC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGAGGTGGAGGTTGCAGTaGGCTCATGTGCCACTGCAC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWRWRLQ*AHVPLH
Trigger: GTGCAGTGGCACATGAGCTCACTGCAACCTCCACCT...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGGCGTGTACTCGTACATaGTGGCAGTTAAGCTGGAGC +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLACTRT*WQLSWS
Trigger: GCTCCAGCTTAACTGCCAGCATGTACGAGTACACGC...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp AACCATGTCCTGGTACTGTGGCCTACTGACTGTATTGAATGTACTGGATGGCCTCTAGTCCTGAATGAATaGTTGGGGGTTCCATCGGCA +
Preference number: 4 (lower is better)
Translates to: NHVLVLWPTDCIECTGWPLVLNE*LGVPSA
Trigger: TGCCGATGGAACCCCCAAGCATTCATTCAGGACTAG...AGGCCATCCAGTACATTCAATACAGTCAGTAGGCCACAGTACCAGGACATGGTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCGGAAGTCCCTGTGTCTaGGCCACTTGTGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFGSPCV*ATCGLI
Trigger: GATCAGCCCACAAGTGGCGCAGACACAGGGACTTCC...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGGAAGTCCCTGTGTCTaGGCCACTTGTGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIGSPCV*ATCGLI
Trigger: GATCAGCCCACAAGTGGCGCAGACACAGGGACTTCC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGGTTTCAGGAAACCGTaGGCTCTCAAGAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRGFRKP*ALKRGA
Trigger: TGCTCCTCTCTTGAGAGCGCACGGTTTCCTGAAACC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp GTCCAAAAGTACTGGTTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATGGGCTGGTGGGCTCTGCTaGACAGGCTCCGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: VQKYWFLQLLSTVFHKAWAGGLC*TGSVFL
Trigger: GAGGAAGACGGAGCCTGTGCAGCAGAGCCCACCAGC...CCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGTACTTTTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGTAAAGAACCAGCAGTaGACACGGATTCCTGCGACC +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRVKNQQ*TRIPAT
Trigger: GGTCGCAGGAATCCGTGTGCACTGCTGGTTCTTTAC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTACAGTGGCCGATTCTaGCCCTGGCCCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWYSGRF*PWPFIL
Trigger: GAGGATGAAGGGCCAGGGGCAGAATCGGCCACTGTA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGGGCCTCCCCAGCACTaGCTTCTTCTTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPGPPQH*LLLAVG
Trigger: GCCCACCGCAAGAAGAAGGCAGTGCTGGGGAGGCCC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGGGCCTCCCCAGCACTaGCTTCTTCTTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLGPPQH*LLLAVG
Trigger: GCCCACCGCAAGAAGAAGGCAGTGCTGGGGAGGCCC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGCCACGTAGAAGATCCTaGCGTGGCTGTCAATGCGTG +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEPRRRS*RGCQCV
Trigger: CACGCATTGACAGCCACGGCAGGATCTTCTACGTGG...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGGAGCTGTCGGTCGCTaGCACGTCGTGGTTCTGTTT +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFGAVGR*HVVVLF
Trigger: AAACAGAACCACGACGTGGCAGCGACCGACAGCTCC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGATCTCTGCAGCACCTaGGGGGCTGGGGGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPDLCST*GAGGAV
Trigger: GACAGCTCCCCCAGCCCCGCAGGTGCTGCAGAGATC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGATCTCTGCAGCACCTaGGGGGCTGGGGGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGDLCST*GAGGAV
Trigger: GACAGCTCCCCCAGCCCCGCAGGTGCTGCAGAGATC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGATCTCTGCAGCACCTaGGGGGCTGGGGGAGCTGTC +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLDLCST*GAGGAV
Trigger: GACAGCTCCCCCAGCCCCGCAGGTGCTGCAGAGATC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTATGGAGTTAGATCTCTaGAGCACCTGCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFMELDL*STCGAG
Trigger: CCCAGCCCCGCAGGTGCTGCAGAGATCTAACTCCAT...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAATGGAGTTAGATCTCTaGAGCACCTGCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIMELDL*STCGAG
Trigger: CCCAGCCCCGCAGGTGCTGCAGAGATCTAACTCCAT...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGTCAGCTTCCTCCCCTaGCCCATCAATAGCATTGGT +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRVSFLP*PINSIG
Trigger: ACCAATGCTATTGATGGGGCAGGGGAGGAAGCTGAC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCTCCCGTCGGAAATCTaGACTGGCTTGGTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVLPSEI*TGLVKV
Trigger: GACTTTCACCAAGCCAGTGCAGATTTCCGACGGGAG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACACTTGTGGGTCTACTaGTCTGAAGTGGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIHLWVY*SEVGAG
Trigger: CCCGGCTCCCACTTCAGAGCAGTAGACCCACAAGTG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCACTTGTGGGTCTACTaGTCTGAAGTGGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFHLWVY*SEVGAG
Trigger: CCCGGCTCCCACTTCAGAGCAGTAGACCCACAAGTG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCCACTTGTGGGTCTACTaGTCTGAAGTGGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFHLWVY*SEVGAG
Trigger: CCCGGCTCCCACTTCAGAGCAGTAGACCCACAAGTG...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGCACTGTGGCTGCGTTaGCTTGTCAGGTGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIALWLR*LVRCCR
Trigger: TCGGCAACACCTGACAAGGCAACGCAGCCACAGTGC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTATTTCAGCTGTGCCTaGGATGACCAATTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIYFSCA*DDQFQF
Trigger: GAACTGGAATTGGTCATCGCAGGCACAGCTGAAATA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAGATTGGGCCAAATGCTaGCAGTTTGGCTTGAACCAC +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKDWAKC*QFGLNH
Trigger: GTGGTTCAAGCCAAACTGGCAGCATTTGGCCCAATC...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAAGCGGAAACCTATGGTaGACACCATGCAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRSGNLW*TPCRHS
Trigger: TGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCT...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCTCTCGTTGTGTAAGTaGATCCTGGCTTCAACACTT +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLILSLCK*ILASTL
Trigger: AAGTGTTGAAGCCAGGATGCACTTACACAACGAGAG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGACCAAGGTGGGAGGACTaGTTGAGCTCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRPRWED*LSSGVQ
Trigger: TTGAACTCCTGAGCTCAAGCAGTCCTCCCACCTTGG...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTCCCGTCTGCTTCTCTaGGATTGGCTGCCTACAAAG +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVSRLLL*DWLPTK
Trigger: CTTTGTAGGCAGCCAATCCCAGAGAAGCAGACGGGA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGCTCTGGAGGTTCTCTaGGCTCAATGTGTACCGCAT +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRALEVL*AQCVPH
Trigger: ATGCGGTACACATTGAGCCCAGAGAACCTCCAGAGC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCTGGGCGGCAAGGCTCTaGAGGTTCTCTGGGCTCAAT +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFWAARL*RFSGLN
Trigger: ATTGAGCCCAGAGAACCTCCAGAGCCTTGCCGCCCA...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATGGGCGGCAAGGCTCTaGAGGTTCTCTGGGCTCAAT +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIWAARL*RFSGLN
Trigger: ATTGAGCCCAGAGAACCTCCAGAGCCTTGCCGCCCA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTTCTGGCATGGAGCTCTaGGCGGCAAGGCTCTGGAGG +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTSGMEL*AARLWR
Trigger: CCTCCAGAGCCTTGCCGCCCAGAGCTCCATGCCAGA...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTCATGTTCTCTGGCATaGAGCTCTGGGCGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWSCSLA*SSGRQG
Trigger: GCCTTGCCGCCCAGAGCTCCATGCCAGAGAACATGA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATGCTGGCAGTTAAGCTaGAGCGGCTCTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRCWQLS*SGSQKS
Trigger: TGACTTCTGAGAGCCGCTCCAGCTTAACTGCCAGCA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCTGTACTCGTACATGCTaGCAGTTAAGCTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCCTRTC*QLSWSG
Trigger: GCCGCTCCAGCTTAACTGCCAGCATGTACGAGTACA...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTGTACTCGTACATGCTaGCAGTTAAGCTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVCTRTC*QLSWSG
Trigger: GCCGCTCCAGCTTAACTGCCAGCATGTACGAGTACA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGCCCCATCATCACAGCTaGGTTCTTCACGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLPHHHS*VLHGDA
Trigger: TGCATCACCGTGAAGAACCCAGCTGTGATGATGGGG...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCTCTCGGTGCCAAATTaGATTGGTGGTGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLILSVPN*IGGVTD
Trigger: ATCAGTAACACCACCAATCCAATTTGGCACCGAGAG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTAGGTACCCACTCACGTaGTCAGCTGGGAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFRYPLT*SAGSLL
Trigger: CAGAAGGCTCCCAGCTGACCACGTGAGTGGGTACCT...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGTCGTGATGGCTCCCTaGCATGTCCTCGTCATCGGA +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWVVMAP*HVLVIG
Trigger: TCCGATGACGAGGACATGCCAGGGAGCCATCACGAC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACACTGTCCTCAGAAACTaGCCCATTAGAGCACACCTG +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHTVLRN*PIRAHL
Trigger: CAGGTGTGCTCTAATGGGCCAGTTTCTGAGGACAGT...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAAATCCTGACGTCCTCTaGGAGGTGAGGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRNPDVL*EVRSLK
Trigger: CTTCAAGGACCTCACCTCCCAGAGGACGTCAGGATT...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGTCCCCGGCCTGGAGTaGCCATTGTGTTCGATAGCA +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWVPGLE*PLCSIA
Trigger: TGCTATCGAACACAATGGCCACTCCAGGCCGGGGAC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGCTCCTCCAAGGAAGATaGGTAACCCAGGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLLLQGR*VTQVLL
Trigger: CAGCAAGACCTGGGTTACCCATCTTCCTTGGAGGAG...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCTCCTCCAAGGAAGATaGGTAACCCAGGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVLLQGR*VTQVLL
Trigger: CAGCAAGACCTGGGTTACCCATCTTCCTTGGAGGAG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGTGTCTGCGCCACTTGTaGGCTGATCTACCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLCLRHL*ADLPLE
Trigger: CTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACA...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTGTCTGCGCCACTTGTaGGCTGATCTACCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVCLRHL*ADLPLE
Trigger: CTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAATCCTGGCAGGATCACTaGGTTCTGTTTCAGAGGACA +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKSWQDH*VLFQRT
Trigger: TGTCCTCTGAAACAGAACCCAGTGATCCTGCCAGGA...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTCACACTCTCTGTCCTaGCAGGATCACTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVSHSLS*QDHWVL
Trigger: CAGAACCCAGTGATCCTGCCAGGACAGAGAGTGTGA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATCAGAGGACAGCTGCGTaGTCACACTCTCATTGCAGG +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNQRTAA*SHSHCR
Trigger: CCTGCAATGAGAGTGTGACCACGCAGCTGTCCTCTG...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTAGCTGGGGTGGAGTAAGGCATGTGGAGGCACATACGACATTATCTCTTCTTCTGAGAAGAAAAGGCTaGGGTTTCAGGAAACCGTGC +
Preference number: 4 (lower is better)
Translates to: SSWGGVRHVEAHTTLSLLLRRKG*GFRKPC
Trigger: GCACGGTTTCCTGAAACCCCAGCCTTTTCTTCTCAG...AAGAAGAGATAATGTCGTATGTGCCTCCACATGCCTTACTCCACCCCAGCTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp AACCATGTCCTGGTACTGTGGCCTACTGACTGTATTGAATGTACTGGATGGCCTTACCGGCTAACATCCTaGCGCACTGAAGGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: NHVLVLWPTDCIECTGWPYRLTS*RTEGSD
Trigger: ATCACTACCTTCAGTGCGCCAGGATGTTAGCCGGTA...AGGCCATCCAGTACATTCAATACAGTCAGTAGGCCACAGTACCAGGACATGGTT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGTCGCTGCCACGTCGTaGTTCTGTTTACGTGATCCA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRVAATS*FCLRDP
Trigger: TGGATCACGTAAACAGAACCACGACGTGGCAGCGAC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACCACGGTGAAGAACTCTaGGCTGATGAGGAACTTCAC +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHHGEEL*ADEELH
Trigger: GTGAAGTTCCTCATCAGCCCAGAGTTCTTCACCGTG...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGTGGTGCGGGAGTTGTaGTCCACAAAGAATGCCTTG +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRVVREL*STKNAL
Trigger: CAAGGCATTCTTTGTGGACCACAACTCCCGCACCAC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAATCTACTGCTCTGAAGTaGGAGCCGGGGATCAATGAA +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKSTALK*EPGINE
Trigger: TTCATTGATCCCCGGCTCCCACTTCAGAGCAGTAGA...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGCCTGGGAAGAACTGGTaGTCCTGCATGTCGAGAATC +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLPGKNW*SCMSRI
Trigger: GATTCTCGACATGCAGGACCACCAGTTCTTCCCAGG...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGGAAGAACTGGTaGTCCTGCATGTCGAGAATC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVPGKNW*SCMSRI
Trigger: GATTCTCGACATGCAGGACCACCAGTTCTTCCCAGG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCCCTGGGAAGAACTGGTaGTCCTGCATGTCGAGAATC +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCPGKNW*SCMSRI
Trigger: GATTCTCGACATGCAGGACCACCAGTTCTTCCCAGG...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTAAGGCGCACCAATCCTaGAGTCCCTTCAGTTCGGAT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVKAHQS*SPFSSD
Trigger: ATCCGAACTGAAGGGACTCCAGGATTGGTGCGCCTT...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTCACGGGAGAGCCACGTaGGGACTGACAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTHGRAT*GLTVAG
Trigger: CCCAGCTACTGTCAGTCCCCACGTGGCTCTCCCGTG...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp GTCCAAAAGTACTGGTTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATGGCACGGGAGAGCCACGTaGGGACTGACAGTAGCTGGG +
Preference number: 4 (lower is better)
Translates to: VQKYWFLQLLSTVFHKAWHGRAT*GLTVAG
Trigger: CCCAGCTACTGTCAGTCCCCACGTGGCTCTCCCGTG...CCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGTACTTTTGGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCCGCTTGTAAGGGGCTaGAGCCCGGGCATTGGCACG +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGPLVRG*SPGIGT
Trigger: CGTGCCAATGCCCGGGCTCCAGCCCCTTACAAGCGG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGCACACAGAATCTTCTTaGGCCGTTACTCCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLHTESS*AVTPSE
Trigger: CTCCGAGGGAGTAACGGCCCAAGAAGATTCTGTGTG...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCACACAGAATCTTCTTaGGCCGTTACTCCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVHTESS*AVTPSE
Trigger: CTCCGAGGGAGTAACGGCCCAAGAAGATTCTGTGTG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAAAGCATGGAAAAGGATaGGTAGGGAGGCAGATCCAG +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKKHGKG*VGRQIQ
Trigger: CTGGATCTGCCTCCCTACCCATCCTTTTCCATGCTT...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCAAGTCCAAAAGTACTaGTTTCTTCAACTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDQVQKY*FLQLLS
Trigger: TGACAGCAGTTGAAGAAACCAGTACTTTTGGACTTG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGGGTTGGGTTGTTCCCTaGGCATCAAGCTCACCCAAA +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLGWVVP*ASSSPK
Trigger: TTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACC...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGGTTGGGTTGTTCCCTaGGCATCAAGCTCACCCAAA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRGWVVP*ASSSPK
Trigger: TTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACAAACAAACATCAAACTaGCACAGAGGGAATGCCAAT +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDKQTSN*HRGNAN
Trigger: ATTGGCATTCCCTCTGTGCCAGTTTGATGTTTGTTT...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGGGGTGGCACAACTGCTaGGCTCCTCTTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEGWHNC*APLSSF
Trigger: AAAGGAGGAAAGAGGAGCCCAGCAGTTGTGCCACCC...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATATATTCTTGCGGGGTaGCACAACTGCTGGGCTCCT +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRYILAG*HNCWAP
Trigger: AGGAGCCCAGCAGTTGTGCCACCCCGCAAGAATATA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGGTCCTCTCCCTCAACTaGTGCTCAAATAGACCCCAA +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLVLSLN*CSNRPQ
Trigger: TTGGGGTCTATTTGAGCATCAGTTGAGGGAGAGGAC...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260983.8
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATGCCAAGGTTGTAGCTaGGCATTTGATCACCGATGG +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRCQGCS*AFDHRW
Trigger: CCATCGGTGATCAAATGCTCAGCTACAACCTTGGCA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR TCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCATCTAAGTAATCATTaGGTGAATCCTGACGTCCTC +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIHLSNH*VNPDVL
Trigger: GAGGACGTCAGGATTCACTCAATGATTACTTAGATG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTGAATCAATATaGAGCATGGCATTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDSSESI*SMALSL
Trigger: AAGACTCAATGCCATGCTTCATATTGATTCAGATGA...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATCCTCCAGCTTTGTCTaGGATGTCAGGCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRSSSFV*DVRLPS
Trigger: TGATGGAAGCCTGACATCTCAGACAAAGCTGGAGGA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTCTTCGGCTTCCTCCTaGTGCATCGGAAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWSSASS*CIGSPC
Trigger: ACAGGGACTTCCGATGCATCAGGAGGAAGCCGAAGA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCTCTTCGGCTTCCTCCTaGTGCATCGGAAGTCCCTGT +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFSSASS*CIGSPC
Trigger: ACAGGGACTTCCGATGCATCAGGAGGAAGCCGAAGA...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCCGTCTTCCTCCTCCTaGGAAGAAAAGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWPSSSS*EEKAGV
Trigger: AACCCCAGCCTTTTCTTCTCAGGAGGAGGAAGACGG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGATCTGGAGGTAGAGTaGGGCAGGATGTTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIDLEVE*GRMFSR
Trigger: ACGGGAGAACATCCTGCCTCACTCTACCTCCAGATC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAGATCTTCTCCCTGAGTaGGTGATTCCTGGTAAGATC +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKDLLPE*VIPGKI
Trigger: GATCTTACCAGGAATCACTCACTCAGGGAGAAGATC...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGAAGGTCTGCATCGCTTaGAAGGCGCACCAATCCTGG +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWKVCIA*KAHQSW
Trigger: CCAGGATTGGTGCGCCTTTCAAGCGATGCAGACCTT...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp GTCCAAAAGTACTGGTTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATGGCGAGTTCTGAGGAGATaGCACGGGAGAGCCACGTGG +
Preference number: 4 (lower is better)
Translates to: VQKYWFLQLLSTVFHKAWRVLRR*HGRATW
Trigger: CCACGTGGCTCTCCCGTGTCATCTCCTCAGAACTCG...CCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGTACTTTTGGAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACAAGGATCCTACCACTaGATCGGAACCATTCATGGT +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKQGSYH*IGTIHG
Trigger: ACCATGAATGGTTCCGATTCAGTGGTAGGATCCTTG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACTAGAAGGCAGCTTCTaGACCTGCCTGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNILEGSF*TCLSTE
Trigger: CTCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTCCAGTCCCCAAATGTaGCAGAGCACTTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNSSPQM*QSTCSW
Trigger: CCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTCAAGAACTGTTGATTaGAAGACGGTTGGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLISRTVD*KTVGLF
Trigger: GAACAACCCAACCGTCTTTCAATCAACAGTTCTTGA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGGTGGGAGGCTGGCTTaGGCCTGGAAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLGGRLA*AWKAEV
Trigger: AACCTCTGCCTTCCAGGCTCAAGCCAGCCTCCCACC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCATGCAGTTACCACTCTaGATCTTGACAGTTGGTCAA +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIMQLPL*ILTVGQ
Trigger: TTGACCAACTGTCAAGATTCAGAGTGGTAACTGCAT...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAACTAGCCATCCCGTCTaGTTCTCTGGGATTGGCTGC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNITSHPV*FSGIGC
Trigger: GCAGCCAATCCCAGAGAAGCAGACGGGATGGCTAGT...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACTCACAAAAAGCAGGTaGTCCCGGGCTGAACTAGCC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNILTKSR*SRAELA
Trigger: GGCTAGTTCAGCCCGGGAGCACCTGCTTTTTGTGAG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR GCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGTAGACCGTCTCTCCTaGCCGTGGTGGGCACAGGTG +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGVDRLS*PWWAQV
Trigger: CACCTGTGCCCACCACGGGCAGGAGAGACGGTCTAC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGAATATTTCTCTCGGTaGCAAATTGGATTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIEYFSR*QIGLVV
Trigger: CACCACCAATCCAATTTGGCACCGAGAGAAATATTC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCTAGTCCTGAATGAATaGTTGGGGGTTCCATCGGCA +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVLVLNE*LGVPSA
Trigger: TGCCGATGGAACCCCCAAGCATTCATTCAGGACTAG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTGGTCACACTCTCATTaGAGGAGCTGTCAGCGCATT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVWSHSH*RSCQRI
Trigger: AATGCGCTGACAGCTCCTGCAATGAGAGTGTGACCA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATGGTCACACTCTCATTaGAGGAGCTGTCAGCGCATT +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRWSHSH*RSCQRI
Trigger: AATGCGCTGACAGCTCCTGCAATGAGAGTGTGACCA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp GCTCCTGTAGAATTTCAAAGATATTGGGTTGACGTAGAAATGCAACAATCTTGTGTGCACACGGATTCCTaGGACCCTTCGGCAGGGCCA +
Preference number: 4 (lower is better)
Translates to: APVEFQRYWVDVEMQQSCVHTDS*DPSAGP
Trigger: TGGCCCTGCCGAAGGGTCGCAGGAATCCGTGTGCAC...ACAAGATTGTTGCATTTCTACGTCAACCCAATATCTTTGAAATTCTACAGGAGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGTAAAGAACCAGCAGTaGACACGGATTCCTGCGACC +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNVKNQQ*TRIPAT
Trigger: GGTCGCAGGAATCCGTGTGCACTGCTGGTTCTTTAC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATGGGCCTCCCCAGCACTaGCTTCTTCTTGCGGTGGGC +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYGPPQH*LLLAVG
Trigger: GCCCACCGCAAGAAGAAGGCAGTGCTGGGGAGGCCC...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCAATTCCAGTTCTCTTaGATCAAAAACAGATACCAG +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDQFQFS*IKNRYQ
Trigger: CTGGTATCTGTTTTTGATGCAAGAGAACTGGAATTG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACGTTGAATCTTTCCACTaGAGCCCAGAACCACCGAAT +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHVESFH*SPEPPN
Trigger: ATTCGGTGGTTCTGGGCTGCAGTGGAAAGATTCAAC...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAGTTGAATCTTTCCACTaGAGCCCAGAACCACCGAAT +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKVESFH*SPEPPN
Trigger: ATTCGGTGGTTCTGGGCTGCAGTGGAAAGATTCAAC...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACCGGTTAAAACATGTATaGGCTCTGGGAAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHRLKHV*ALGRAV
Trigger: CACTGCTCTTCCCAGAGCGCATACATGTTTTAACCG...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCACAGACCATCTTATTaGAAATCTGTAAAGGTACCT +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDHRPSY*KSVKVP
Trigger: AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TGTGTCTGCGCCACTTGTGGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCTACACACATACCACTTaGATATACATTGTCACAGAC +
Preference number: 4 (lower is better)
Translates to: CVCATCGLIYLLRATQFSYTHTT*IYIVTD
Trigger: GTCTGTGACAATGTATATGCAAGTGGTATGTGTGTA...GCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACACTATTACTTGCCATTaGTTCCCAATAGAAACAGCA +
Preference number: 4 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDTITCH*FPIETA
Trigger: TGCTGTTTCTATTGGGAAGCAATGGCAAGTAATAGT...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTTCTCTGGGATTGGCTaGCTACAAAGCTCCAGCCGC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWFSGIG*LQSSSR
Trigger: GCGGCTGGAGCTTTGTAGGCAGCCAATCCCAGAGAA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644978.2
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTCCCGTCTGCTTCTCTaGGATTGGCTGCCTACAAAG +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNSRLLL*DWLPTK
Trigger: CTTTGTAGGCAGCCAATCCCAGAGAAGCAGACGGGA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTAATGTGTACCGCATCTaGGGATTTCGACGCCTCACA +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVNVYRI*GFRRLT
Trigger: TGTGAGGCGTCGAAATCCCCAGATGCGGTACACATT...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGCTCTGGAGGTTCTCTaGGCTCAATGTGTACCGCAT +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNALEVL*AQCVPH
Trigger: ATGCGGTACACATTGAGCCCAGAGAACCTCCAGAGC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGGTCGGTGTCGCTGTTaGCCCGCTGCAGGGTCATGT +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLGRCRC*PAAGSC
Trigger: ACATGACCCTGCAGCGGGCCAACAGCGACACCGACC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTGTACTCGTACATGCTaGCAGTTAAGCTGGAGCGGC +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNCTRTC*QLSWSG
Trigger: GCCGCTCCAGCTTAACTGCCAGCATGTACGAGTACA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCGTCTCTCCTGCCCGTaGTGGGCACAGGTGGGGAAA +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPRLSCP*WAQVGK
Trigger: TTTCCCCACCTGTGCCCACCACGGGCAGGAGAGACG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCGCATTTGATCACCGATaGCTTGTCGCTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFAFDHR*LVAPAA
Trigger: GGCTGCTGGAGCGACAAGCCATCGGTGATCAAATGC...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAACTCACGTGGTCAGCTaGGAGCCTTCTGCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNITHVVS*EPSAKV
Trigger: AACCTTGGCAGAAGGCTCCCAGCTGACCACGTGAGT...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACTGTGCCAACAGCTTCTaGAGAGGCATCTTCATGAAC +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHCANSF*RGIFMN
Trigger: GTTCATGAAGATGCCTCTCCAGAAGCTGTTGGCACA...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAATGTGCCAACAGCTTCTaGAGAGGCATCTTCATGAAC +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKCANSF*RGIFMN
Trigger: GTTCATGAAGATGCCTCTCCAGAAGCTGTTGGCACA...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000260983.8
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATAATCCTGACGTCCTCTaGGAGGTGAGGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNNPDVL*EVRSLK
Trigger: CTTCAAGGACCTCACCTCCCAGAGGACGTCAGGATT...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTTCGGAGAGGCACCCATaGACCTCTCAGAGCAGGTCG +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTSERHP*TSQSRS
Trigger: CGACCTGCTCTGAGAGGTCCATGGGTGCCTCTCCGA...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATTGCCCTGGTCAGCACTaGGTTGAGGCTCTGGGCCGC +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYCPGQH*VEALGR
Trigger: GCGGCCCAGAGCCTCAACCCAGTGCTGACCAGGGCA...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCCTGAGAAGAAAAGGCTaGGGTTTCAGGAAACCGTGC +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCLRRKG*GFRKPC
Trigger: GCACGGTTTCCTGAAACCCCAGCCTTTTCTTCTCAG...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGACTGAGAAGAAAAGGCTaGGGTTTCAGGAAACCGTGC +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRLRRKG*GFRKPC
Trigger: GCACGGTTTCCTGAAACCCCAGCCTTTTCTTCTCAG...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGTAGCGCCCTCCTCCTaGGCAGTTGCCCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGVAPSS*AVAPSQ
Trigger: CTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTAC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATACCGGCTAACATCCTaGCGCACTGAAGGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRYRLTS*RTEGSD
Trigger: ATCACTACCTTCAGTGCGCCAGGATGTTAGCCGGTA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTACCGGCTAACATCCTaGCGCACTGAAGGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVYRLTS*RTEGSD
Trigger: ATCACTACCTTCAGTGCGCCAGGATGTTAGCCGGTA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGTACCGGCTAACATCCTaGCGCACTGAAGGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLYRLTS*RTEGSD
Trigger: ATCACTACCTTCAGTGCGCCAGGATGTTAGCCGGTA...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGCGTGCCTCCCAGTTTaGTGGGAGAGCCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLACLPV*WESLVH
Trigger: GTGGACGAGGCTCTCCCACCAAACTGGGAGGCACGC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGCGTGCCTCCCAGTTTaGTGGGAGAGCCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPACLPV*WESLVH
Trigger: GTGGACGAGGCTCTCCCACCAAACTGGGAGGCACGC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGTCGCTGCCACGTCGTaGTTCTGTTTACGTGATCCA +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNVAATS*FCLRDP
Trigger: TGGATCACGTAAACAGAACCACGACGTGGCAGCGAC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACGTCGGAAATCTGCACTaGCTTGGTGAAAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHVGNLH*LGESQL
Trigger: AAGCTGACTTTCACCAAGCCAGTGCAGATTTCCGAC...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGAACCAGCGCACTTGTaGGTCTACTGCTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNEPAHL*VYCSEV
Trigger: CACTTCAGAGCAGTAGACCCACAAGTGCGCTGGTTC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTACCTCACCCGCACTGTaGCTGCGTTGCCTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTTSPAL*LRCLVR
Trigger: CCTGACAAGGCAACGCAGCCACAGTGCGGGTGAGGT...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTGGCCTGGGAAGAACTaGTGGTCCTGCATGTCGAGA +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWWPGKN*WSCMSR
Trigger: TCTCGACATGCAGGACCACCAGTTCTTCCCAGGCCA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCAAAAGTTCCTCAGTTTaGCTTCGAAATCCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIKSSSV*LRNPAC
Trigger: ACAAGCGGGATTTCGAAGCCAAACTGAGGAACTTTT...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGCCTGTCCACAGAGATaGGCATTCAGCTTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIACPQR*AFSFQV
Trigger: GACCTGGAAGCTGAATGCCCATCTCTGTGGACAGGC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGGTTGGGTTGTTCCCTaGGCATCAAGCTCACCCAAA +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNGWVVP*ASSSPK
Trigger: TTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCACCCCAGAAGTGGTTTaGGCTCAGGGATTGGGATTT +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCTPEVV*AQGLGF
Trigger: AAATCCCAATCCCTGAGCCCAAACCACTTCTGGGGT...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGACCCCAGAAGTGGTTTaGGCTCAGGGATTGGGATTT +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLTPEVV*AQGLGF
Trigger: AAATCCCAATCCCTGAGCCCAAACCACTTCTGGGGT...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCTGGGTTCTTCACGGTaGTGCAGGGGGTCGTGGCTC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHLGSSR*CRGSWL
Trigger: GAGCCACGACCCCCTGCATCACCGTGAAGAACCCAG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCACACCTGGCTGTCGTaGTGGCTCCCTGGCATGTCC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHHTWLS*WLPGMS
Trigger: GGACATGCCAGGGAGCCATCACGACAGCCAGGTGTG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCGGAGCTAGTCCTGAATaGATGCTTGGGGGTTCCATC +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFGASPE*MLGGSI
Trigger: GATGGAACCCCCAAGCATTCATTCAGGACTAGCTCC...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGAGACTCGGTCTCACTaGCGGCTCTTCGGCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGETRSH*RLFGFL
Trigger: GAGGAAGCCGAAGAGCCGTCAGTGAGACCGAGTCTC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp GTCCAAAAGTACTGGTTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATGGGAAGGCTCAGAGCCCTaGTCGAGAGACTCGGTCTCA +
Preference number: 4 (lower is better)
Translates to: VQKYWFLQLLSTVFHKAWEGSEP*SRDSVS
Trigger: TGAGACCGAGTCTCTCGATCAGGGCTCTGAGCCTTC...CCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGTACTTTTGGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATTGGTGGCCGTTGGCTTaGGAACCTCCAGTAGCGCCC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHWWPLA*EPPVAP
Trigger: GGGCGCTACTGGAGGTTCTCAAGCCAACGGCCACCA...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCTGTTCGCGAACATGTTaGGGAATCCCACAAGGTCGC +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFCSRTC*GIPQGR
Trigger: GCGACCTTGTGGGATTCCTCAACATGTTCGCGAACA...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAAATGCCTTGCCCTGGTaGTCATGTTTCATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKNALPW*SCFISH
Trigger: ATGGGAAATGAAACATGATCACCAGGGCAAGGCATT...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGGAGCCGGGGATCAATaGAAGTGGTGGTGCGGGAGT +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPGAGDQ*KWWCGS
Trigger: ACTCCCGCACCACCACTTTCATTGATCCCCGGCTCC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGTGGGTCTACTGCTCTaGAGTGGGAGCCGGGGATCA +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGVGLLL*SGSRGS
Trigger: TGATCCCCGGCTCCCACTTCAGAGCAGTAGACCCAC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACTGGTAAGATCAGGTTaGCGCTCCTGTAGAATTTCA +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKLVRSG*RSCRIS
Trigger: TGAAATTCTACAGGAGCGTCAACCTGATCTTACCAG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGGTCACATAGAATTCTaGGAAGAGCCTTATAAAAGG +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIGHIEF*EEPYKR
Trigger: CCTTTTATAAGGCTCTTCTCAGAATTCTATGTGACC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTGGGATTTTTCACACTaGAAACCAATGGTGCATTGT +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIWDFSH*KPMVHC
Trigger: ACAATGCACCATTGGTTTTCAGTGTGAAAAATCCCA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAACCCTACAAAGTGCGTaGGGAGCTAAACGGACGATG +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNITLQSA*GAKRTM
Trigger: CATCGTCCGTTTAGCTCCTCACGCACTTTGTAGGGT...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACAACCCAGATGGAACATaGTGCTTGTACCCTACAAAG +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHNPDGT*CLYPTK
Trigger: CTTTGTAGGGTACAAGCATCATGTTCCATCTGGGTT...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCTTGAGCTCAAGAGTTTaGGACGTGCCTGGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFLSSRV*DVPGPC
Trigger: ACAAGGCCCAGGCACGTCTCAAACTCTTGAGCTCAA...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGGCGGGCGGATCGCTTaGGCTCAAGAGTTTGAGACG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPGGRIA*AQEFET
Trigger: CGTCTCAAACTCTTGAGCTCAAGCGATCCGCCCGCC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTCGCTGTTGGCCCGCTaGAGGGTCATGTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGSLLAR*RVMFSG
Trigger: GCCAGAGAACATGACCCTGCAGCGGGCCAACAGCGA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR GCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATCTAGTCCTGAATGAATaGTTGGGGGTTCCATCGGCA +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNLVLNE*LGVPSA
Trigger: TGCCGATGGAACCCCCAAGCATTCATTCAGGACTAG...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAATCATCAGCTCTGGATaGCCTGCTAAACATGATCAG +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKIISSG*PAKHDQ
Trigger: CTGATCATGTTTAGCAGGGCATCCAGAGCTGATGAT...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGTAGCTGGGGTGGAGTAAGGCATGTGGAGGCACATACGACATTATCTCTTCTTATCATCAGCTCTGGATaGCCTGCTAAACATGATCAG +
Preference number: 4 (lower is better)
Translates to: SSWGGVRHVEAHTTLSLLIISSG*PAKHDQ
Trigger: CTGATCATGTTTAGCAGGGCATCCAGAGCTGATGAT...AAGAAGAGATAATGTCGTATGTGCCTCCACATGCCTTACTCCACCCCAGCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTGGTCACACTCTCATTaGAGGAGCTGTCAGCGCATT +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNWSHSH*RSCQRI
Trigger: AATGCGCTGACAGCTCCTGCAATGAGAGTGTGACCA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGGTTTCAGGAAACCGTaGGCTCTCAAGAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFGFRKP*ALKRGA
Trigger: TGCTCCTCTCTTGAGAGCGCACGGTTTCCTGAAACC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATGCTGGTGGGCTCTGCTaGACAGGCTCCGTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYAGGLC*TGSVFL
Trigger: GAGGAAGACGGAGCCTGTGCAGCAGAGCCCACCAGC...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGACTGCTGGTGGGCTCTaGTGCACAGGCTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLTAGGL*CTGSVF
Trigger: GAAGACGGAGCCTGTGCAGCAGAGCCCACCAGCAGT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGTAAAGAACCAGCAGTaGACACGGATTCCTGCGACC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWVKNQQ*TRIPAT
Trigger: GGTCGCAGGAATCCGTGTGCACTGCTGGTTCTTTAC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGTAAAGAACCAGCAGTaGACACGGATTCCTGCGACC +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFVKNQQ*TRIPAT
Trigger: GGTCGCAGGAATCCGTGTGCACTGCTGGTTCTTTAC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGCTCCTCCTGGGCAGTTaGCCCTTCACAGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLLLLGS*PFTGAL
Trigger: CAAGGCACCTGTGAAGGGGCAACTGCCCAGGAGGAG...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCTCCTCCTGGGCAGTTaGCCCTTCACAGGTGCCTTG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPLLLGS*PFTGAL
Trigger: CAAGGCACCTGTGAAGGGGCAACTGCCCAGGAGGAG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGCATTGGTCATGGTTCTaGGGATACTCTGATATCGCC +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLHWSWF*GYSDIA
Trigger: GGCGATATCAGAGTATCCGCAGAACCATGACCAATG...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGTCAGCTTCCTCCCCTaGCCCATCAATAGCATTGGT +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIVSFLP*PINSIG
Trigger: ACCAATGCTATTGATGGGGCAGGGGAGGAAGCTGAC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACTCCCGTCGGAAATCTaGACTGGCTTGGTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNILPSEI*TGLVKV
Trigger: GACTTTCACCAAGCCAGTGCAGATTTCCGACGGGAG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCTCCCGTCGGAAATCTaGACTGGCTTGGTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWLPSEI*TGLVKV
Trigger: GACTTTCACCAAGCCAGTGCAGATTTCCGACGGGAG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGCACTAGGGTTAGAATaGAGCACGGTGAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRALGLE*STVKNS
Trigger: AGAGTTCTTCACCGTGCTGCATTCTAACCCTAGTGC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAAAGAACTGGTGGTCCTaGATGTCGAGAATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRKNWWS*MSRIFS
Trigger: GGAGAAGATTCTCGACATGCAGGACCACCAGTTCTT...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCAAGAACTGGTGGTCCTaGATGTCGAGAATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCKNWWS*MSRIFS
Trigger: GGAGAAGATTCTCGACATGCAGGACCACCAGTTCTT...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGTTGAATCTTTCCACTaGAGCCCAGAACCACCGAAT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVVESFH*SPEPPN
Trigger: ATTCGGTGGTTCTGGGCTGCAGTGGAAAGATTCAAC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGACGGTTAAAACATGTATaGGCTCTGGGAAGAGCAGTG +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRRLKHV*ALGRAV
Trigger: CACTGCTCTTCCCAGAGCGCATACATGTTTTAACCG...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGATTGGGCCAAATGCTaGCAGTTTGGCTTGAACCAC +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNDWAKC*QFGLNH
Trigger: GTGGTTCAAGCCAAACTGGCAGCATTTGGCCCAATC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGGGAGATTGGGCCAAATaGTGCCAGTTTGGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEGDWAK*CQFGLN
Trigger: GTTCAAGCCAAACTGGCAGCATTTGGCCCAATCTCC...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACTTAGCATTATATTCTTaGGGGGTGGCACAACTGCTG +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHLALYS*GVAQLL
Trigger: CAGCAGTTGTGCCACCCCGCAAGAATATAATGCTAA...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTTCATGTTCTCTGGCATaGAGCTCTGGGCGGCAAGGC +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTSCSLA*SSGRQG
Trigger: GCCTTGCCGCCCAGAGCTCCATGCCAGAGAACATGA...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCAGGGTCATGTTCTCTaGCATGGAGCTCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGQGHVL*HGALGG
Trigger: GCCGCCCAGAGCTCCATGCCAGAGAACATGACCCTG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCTCTCCTGCCCGTGGTaGGCACAGGTGGGGAAACTG +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHLSCPW*AQVGKL
Trigger: CAGTTTCCCCACCTGTGCCCACCACGGGCAGGAGAG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTCGCTGTCCCCGGCCTaGAGTGGCCATTGTGTTCGA +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLSLSPA*SGHCVR
Trigger: TCGAACACAATGGCCACTCCAGGCCGGGGACAGCGA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAGCTCTCTGCAAGCTCTaGAAGATTTTCTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKALCKL*KIFWLI
Trigger: GATAAGCCAGAAAATCTTCCAGAGCTTGCAGAGAGC...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTACTGGGTTGAGGCTCTaGGCCGCCTTCACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPTGLRL*AAFTFL
Trigger: GAGGAAGGTGAAGGCGGCCCAGAGCCTCAACCCAGT...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGACTGGGTTGAGGCTCTaGGCCGCCTTCACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGTGLRL*AAFTFL
Trigger: GAGGAAGGTGAAGGCGGCCCAGAGCCTCAACCCAGT...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTGTCTGCGCCACTTGTaGGCTGATCTACCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWCLRHL*ADLPLE
Trigger: CTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGCCTCAGGCCTGGTGCTaGCTTCGCTCACACTCTCTG +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLPQAWC*LRSHSL
Trigger: CAGAGAGTGTGAGCGAAGCCAGCACCAGGCCTGAGG...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCCTCAGGCCTGGTGCTaGCTTCGCTCACACTCTCTG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPPQAWC*LRSHSL
Trigger: CAGAGAGTGTGAGCGAAGCCAGCACCAGGCCTGAGG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCCTCAGGCCTGGTGCTaGCTTCGCTCACACTCTCTG +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGPQAWC*LRSHSL
Trigger: CAGAGAGTGTGAGCGAAGCCAGCACCAGGCCTGAGG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTTCTCTCCCTCAGGCCTaGTGCTGGCTTCGCTCACAC +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPSLPQA*CWLRSH
Trigger: GTGTGAGCGAAGCCAGCACCAGGCCTGAGGGAGAGA...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGCTGAGAAGAAAAGGCTaGGGTTTCAGGAAACCGTGC +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEELRRKG*GFRKPC
Trigger: GCACGGTTTCCTGAAACCCCAGCCTTTTCTTCTCAG...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGCCTTCTTCTTGCGGTaGGCTCTCGGCAGCAGCTGC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHAFFLR*ALGSSC
Trigger: GCAGCTGCTGCCGAGAGCCCACCGCAAGAAGAAGGC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGTAGCGCCCTCCTCCTaGGCAGTTGCCCCTTCACAG +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHVAPSS*AVAPSQ
Trigger: CTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTAC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTACCGGCTAACATCCTaGCGCACTGAAGGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNYRLTS*RTEGSD
Trigger: ATCACTACCTTCAGTGCGCCAGGATGTTAGCCGGTA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGCCTCGTCCACCCTCTaGTACCGGCTAACATCCTGG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPASSTL*YRLTSW
Trigger: CCAGGATGTTAGCCGGTACCAGAGGGTGGACGAGGC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGCGTGCCTCCCAGTTTaGTGGGAGAGCCTCGTCCAC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHACLPV*WESLVH
Trigger: GTGGACGAGGCTCTCCCACCAAACTGGGAGGCACGC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGTCGCTGCCACGTCGTaGTTCTGTTTACGTGATCCA +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFVAATS*FCLRDP
Trigger: TGGATCACGTAAACAGAACCACGACGTGGCAGCGAC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGCCTCTCATTGGTCATaGTTCTGCGGATACTCTGAT +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRASHWS*FCGYSD
Trigger: ATCAGAGTATCCGCAGAACCATGACCAATGAGAGGC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCCTCAGGCCTCTCATTaGTCATGGTTCTGCGGATAC +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFPQASH*SWFCGY
Trigger: GTATCCGCAGAACCATGACCAATGAGAGGCCTGAGG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGTCGGAAATCTGCACTaGCTTGGTGAAAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVVGNLH*LGESQL
Trigger: AAGCTGACTTTCACCAAGCCAGTGCAGATTTCCGAC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATCACGGTGAAGAACTCTaGGCTGATGAGGAACTTCAC +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNHGEEL*ADEELH
Trigger: GTGAAGTTCCTCATCAGCCCAGAGTTCTTCACCGTG...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGTGGTGCGGGAGTTGTaGTCCACAAAGAATGCCTTG +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIVVREL*STKNAL
Trigger: CAAGGCATTCTTTGTGGACCACAACTCCCGCACCAC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGTGGTGCGGGAGTTGTaGTCCACAAAGAATGCCTTG +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFVVREL*STKNAL
Trigger: CAAGGCATTCTTTGTGGACCACAACTCCCGCACCAC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTCTACTGCTCTGAAGTaGGAGCCGGGGATCAATGAA +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNSTALK*EPGINE
Trigger: TTCATTGATCCCCGGCTCCCACTTCAGAGCAGTAGA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGAACCAGCGCACTTGTaGGTCTACTGCTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIEPAHL*VYCSEV
Trigger: CACTTCAGAGCAGTAGACCCACAAGTGCGCTGGTTC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGACCTCACCCGCACTGTaGCTGCGTTGCCTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLTSPAL*LRCLVR
Trigger: CCTGACAAGGCAACGCAGCCACAGTGCGGGTGAGGT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGATTGAATGTACTGGATaGCCTGGGAAGAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLIECTG*PGKNWW
Trigger: CCACCAGTTCTTCCCAGGCCATCCAGTACATTCAAT...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGGTCATTGTAAGCCACTaGAACCATGTCCTGGTACTG +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLVIVSH*NHVLVL
Trigger: CAGTACCAGGACATGGTTCCAGTGGCTTACAATGAC...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTAAGGCGCACCAATCCTaGAGTCCCTTCAGTTCGGAT +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFKAHQS*SPFSSD
Trigger: ATCCGAACTGAAGGGACTCCAGGATTGGTGCGCCTT...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCACACAGAATCTTCTTaGGCCGTTACTCCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWHTESS*AVTPSE
Trigger: CTCCGAGGGAGTAACGGCCCAAGAAGATTCTGTGTG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCACACAGAATCTTCTTaGGCCGTTACTCCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFHTESS*AVTPSE
Trigger: CTCCGAGGGAGTAACGGCCCAAGAAGATTCTGTGTG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATAAGCATGGAAAAGGATaGGTAGGGAGGCAGATCCAG +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNKHGKG*VGRQIQ
Trigger: CTGGATCTGCCTCCCTACCCATCCTTTTCCATGCTT...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGACAAATGCTGCCAGTTTaGCTTGAACCACGTTCAAGG +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRQMLPV*LEPRSR
Trigger: CCTTGAACGTGGTTCAAGCCAAACTGGCAGCATTTG...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCCAAATGCTGCCAGTTTaGCTTGAACCACGTTCAAGG +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCQMLPV*LEPRSR
Trigger: CCTTGAACGTGGTTCAAGCCAAACTGGCAGCATTTG...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp GCTGGGCCTGCAGGTAAGGAGCTCTCTGCAAGCTCTGGAAGATTTTCTGGCTTAATGTCCCTTCACCTTTaGTACATTCAGTGCAAAATA +
Preference number: 4 (lower is better)
Translates to: AGPAGKELSASSGRFSGLMSLHL*YIQCKI
Trigger: TATTTTGCACTGAATGTACCAAAGGTGAAGGGACAT...TAAGCCAGAAAATCTTCCAGAGCTTGCAGAGAGCTCCTTACCTGCAGGCCCAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTAGCTGGGGTGGAGTAAGGCATGTGGAGGCACATACGACATTATCTCTTCTTTTAAAATCATACACCTaGCCAACCCACGTGGCAGTT +
Preference number: 4 (lower is better)
Translates to: SSWGGVRHVEAHTTLSLLLKSYT*PTHVAV
Trigger: AACTGCCACGTGGGTTGGCCAGGTGTATGATTTTAA...AAGAAGAGATAATGTCGTATGTGCCTCCACATGCCTTACTCCACCCCAGCTACT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTTGGAGAGGCATCCGATaGCTTGTCGCTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPWRGIR*LVAPAA
Trigger: GGCTGCTGGAGCGACAAGCCATCGGATGCCTCTCCA...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CAA 72 bp TTCACAGATCAGCTCCCTACACACTTTACACTCTCGTaGTGTAAGTGCATCCTGGCTTCAACACTTGACCAG +
Preference number: 4 (lower is better)
Translates to: FTDQLPTHFTLS*CKCILASTLDQ
Trigger: CTGGTCAAGTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCTGATCTGTGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR CAA 72 bp TCATCGGAAGGGCTACCTAAGTCTCCATTCACAGAATaGACTCCAAGTATTGTGCCAACAGCTTCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: SSEGLPKSPFTE*TPSIVPTASGE
Trigger: CTCTCCAGAAGCTGTTGGCACAATACTTGGAGTCAATTCTGTGAATGGAGACTTAGGTAGCCCTTCCGATGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTTATCTCCGGTTCCATaGAATAGGGCCCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFLSPVP*NRAQAQ
Trigger: TTGAGCCTGGGCCCTATTTCATGGAACCGGAGATAA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACTTTCCTGGCTGAATTaGCATCTTAAGATAAGGGTC +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKLSWLN*HLKIRV
Trigger: GACCCTTATCTTAAGATGTCAATTCAGCCAGGAAAG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR TCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCGGAGAGGCATCTTCATaGACAGAAGACGTAACCTCC +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFGEASS*TEDVTS
Trigger: GGAGGTTACGTCTTCTGTTCATGAAGATGCCTCTCC...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGGAGAGGCATCTTCATaGACAGAAGACGTAACCTCC +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFGEASS*TEDVTS
Trigger: GGAGGTTACGTCTTCTGTTCATGAAGATGCCTCTCC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000260983.8
ENST00000644256.1
ENST00000644978.2
CDS-3UTR TCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCTCCTCCAGCTTTGTCTaGGATGTCAGGCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFSSSFV*DVRLPS
Trigger: TGATGGAAGCCTGACATCTCAGACAAAGCTGGAGGA...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATCCTCCAGCTTTGTCTaGGATGTCAGGCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNISSSFV*DVRLPS
Trigger: TGATGGAAGCCTGACATCTCAGACAAAGCTGGAGGA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGAAGGCTCAGAGCCCTaGTCGAGAGACTCGGTCTCA +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPEGSEP*SRDSVS
Trigger: TGAGACCGAGTCTCTCGATCAGGGCTCTGAGCCTTC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTAATGCCTTGCCCTGGTaGTCATGTTTCATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVNALPW*SCFISH
Trigger: ATGGGAAATGAAACATGATCACCAGGGCAAGGCATT...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAAATGCCTTGCCCTGGTaGTCATGTTTCATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRNALPW*SCFISH
Trigger: ATGGGAAATGAAACATGATCACCAGGGCAAGGCATT...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGTCAGGTGTTGCCGATaGACCAGCGCACTTGTGGGT +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPVRCCR*TSALVG
Trigger: ACCCACAAGTGCGCTGGTTCATCGGCAACACCTGAC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTCAAAGATATTGGGTTaGCGTAGAAATGCAACAATC +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLISKILG*RRNATI
Trigger: GATTGTTGCATTTCTACGTCAACCCAATATCTTTGA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGACTGGTAAGATCAGGTTaGCGCTCCTGTAGAATTTCA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRLVRSG*RSCRIS
Trigger: TGAAATTCTACAGGAGCGTCAACCTGATCTTACCAG...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGTTCTCCCTGAGTGAGTaGTTCCTGGTAAGATCAGGT +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEFSLSE*FLVRSG
Trigger: ACCTGATCTTACCAGGAATCACTCACTCAGGGAGAA...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGTACCTGGCGAGTTCTaGGGAGATGACACGGGAGAG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPVPGEF*GDDTGE
Trigger: CTCTCCCGTGTCATCTCCTCAGAACTCGCCAGGTAC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGTACCTGGCGAGTTCTaGGGAGATGACACGGGAGAG +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLVPGEF*GDDTGE
Trigger: CTCTCCCGTGTCATCTCCTCAGAACTCGCCAGGTAC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGACCTCCCCAACGAAGGTaGCATATAGCTTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRPPQRR*HIAYFS
Trigger: AGAGAAATAAGCTATATGTCACCTTCGTTGGGGAGG...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGCCTCCCCAACGAAGGTaGCATATAGCTTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLPPQRR*HIAYFS
Trigger: AGAGAAATAAGCTATATGTCACCTTCGTTGGGGAGG...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp AGTAGCTGGGGTGGAGTAAGGCATGTGGAGGCACATACGACATTATCTCTTCTTTATAAAAGGGCCGTGTaGAGAAGGCATCCAACAAAT +
Preference number: 4 (lower is better)
Translates to: SSWGGVRHVEAHTTLSLLYKRAV*RRHPTN
Trigger: ATTTGTTGGATGCCTTCTTCACACGGCCCTTTTATA...AAGAAGAGATAATGTCGTATGTGCCTCCACATGCCTTACTCCACCCCAGCTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGTTACTCCCTCGGAGTaGAGCAAATCCTTCATAGGG +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWVTPSE*SKSFIG
Trigger: CCCTATGAAGGATTTGCTTCACTCCGAGGGAGTAAC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGTTACTCCCTCGGAGTaGAGCAAATCCTTCATAGGG +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFVTPSE*SKSFIG
Trigger: CCCTATGAAGGATTTGCTTCACTCCGAGGGAGTAAC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGTTACTCCCTCGGAGTaGAGCAAATCCTTCATAGGG +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIVTPSE*SKSFIG
Trigger: CCCTATGAAGGATTTGCTTCACTCCGAGGGAGTAAC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACTCAAGAACTGTTGATTaGAAGACGGTTGGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHSRTVD*KTVGLF
Trigger: GAACAACCCAACCGTCTTTCAATCAACAGTTCTTGA...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGCAGTCAAGAACTGTTaGTTGAAAGACGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRAVKNC*LKDGWV
Trigger: AACCCAACCGTCTTTCAATCAACAGTTCTTGACTGC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCTGTGTACTTTTTCCTaGTATGCTGTGATTAATTGC +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLILCTFS*YAVINC
Trigger: GCAATTAATCACAGCATATCAGGAAAAAGTACACAG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGGATACATATTAGCATaGTGCCCGAGTATGCATGGA +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVGYILA*CPSMHG
Trigger: TCCATGCATACTCGGGCATCATGCTAATATGTATCC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAGCCCTTTTGTTTCCTTaGGAGTGCTTAAAAGGATAC +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKALLFP*ECLKGY
Trigger: GTATCCTTTTAAGCACTCTCAAGGAAACAAAAGGGC...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACCCTGGCTTCAACACTTaGCCAGTATTGACATACTAT +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHPGFNT*PVLTYY
Trigger: ATAGTATGTCAATACTGGTCAAGTGTTGAAGCCAGG...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp AGTAGCTGGGGTGGAGTAAGGCATGTGGAGGCACATACGACATTATCTCTTCTTTCCAGGCATCCTAAGTaGAAAAATGTATCACATCCC +
Preference number: 4 (lower is better)
Translates to: SSWGGVRHVEAHTTLSLLSRHPK*KNVSHP
Trigger: GGGATGTGATACATTTTTTCACTTAGGATGCCTGGA...AAGAAGAGATAATGTCGTATGTGCCTCCACATGCCTTACTCCACCCCAGCTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCTTCTCTGGGATTGGCTaGCTACAAAGCTCTGCAGTC +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFFSGIG*LQSSAV
Trigger: GACTGCAGAGCTTTGTAGGCAGCCAATCCCAGAGAA...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260983.8
CDS-3UTR GCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATTCGCTGTTGGCCCGCTaGAGGGTCATGTTCTCTGGC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHSLLAR*RVMFSG
Trigger: GCCAGAGAACATGACCCTGCAGCGGGCCAACAGCGA...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR GCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTCCCTCCATGCCTTCTaGCCCCATCATCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGSLHAF*PHHHSW
Trigger: CCAGCTGTGATGATGGGGGCAGAAGGCATGGAGGGA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTCCCTCCATGCCTTCTaGCCCCATCATCACAGCTGG +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLSLHAF*PHHHSW
Trigger: CCAGCTGTGATGATGGGGGCAGAAGGCATGGAGGGA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAATCATCAGCTCTGGATaGCCTGCTAAACATGATCAG +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRIISSG*PAKHDQ
Trigger: CTGATCATGTTTAGCAGGGCATCCAGAGCTGATGAT...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCATCATCAGCTCTGGATaGCCTGCTAAACATGATCAG +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCIISSG*PAKHDQ
Trigger: CTGATCATGTTTAGCAGGGCATCCAGAGCTGATGAT...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGGAAGTCCCTGTGTCTaGGCCACTTGTGGGCTGATC +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPGSPCV*ATCGLI
Trigger: GATCAGCCCACAAGTGGCGCAGACACAGGGACTTCC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATGGTCACACTCTCATTaGAGGAGCTGTCAGCGCATT +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIWSHSH*RSCQRI
Trigger: AATGCGCTGACAGCTCCTGCAATGAGAGTGTGACCA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATACTGCTGGTGGGCTCTaGTGCACAGGCTCCGTCTTC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHTAGGL*CTGSVF
Trigger: GAAGACGGAGCCTGTGCAGCAGAGCCCACCAGCAGT...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTACAGTGGCCGATTCTaGCCCTGGCCCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGYSGRF*PWPFIL
Trigger: GAGGATGAAGGGCCAGGGGCAGAATCGGCCACTGTA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGTGGCTGTCAATGCGTaGCTCCCAGTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLVAVNA*LPVWWE
Trigger: CTCCCACCAAACTGGGAGGCACGCATTGACAGCCAC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGTGGCTGTCAATGCGTaGCTCCCAGTTTGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGVAVNA*LPVWWE
Trigger: CTCCCACCAAACTGGGAGGCACGCATTGACAGCCAC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTATGGAGTTAGATCTCTaGAGCACCTGCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPMELDL*STCGAG
Trigger: CCCAGCCCCGCAGGTGCTGCAGAGATCTAACTCCAT...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATATCGCCGGTTCAGCTaGTCCATTTGCTGTATGGAG +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIYRRFS*SICCME
Trigger: CTCCATACAGCAAATGGAGCAGCTGAACCGGCGATA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTATCGCCGGTTCAGCTaGTCCATTTGCTGTATGGAG +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFYRRFS*SICCME
Trigger: CTCCATACAGCAAATGGAGCAGCTGAACCGGCGATA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATCATTGGTCATGGTTCTaGGGATACTCTGATATCGCC +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNHWSWF*GYSDIA
Trigger: GGCGATATCAGAGTATCCGCAGAACCATGACCAATG...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGACCACAAAGAATGCCTTaGCCTGGTGATCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRPQRMP*PGDHVS
Trigger: TGAAACATGATCACCAGGGCAAGGCATTCTTTGTGG...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCACTTGTGGGTCTACTaGTCTGAAGTGGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPHLWVY*SEVGAG
Trigger: CCCGGCTCCCACTTCAGAGCAGTAGACCCACAAGTG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCACTTGTGGGTCTACTaGTCTGAAGTGGGAGCCGGG +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGHLWVY*SEVGAG
Trigger: CCCGGCTCCCACTTCAGAGCAGTAGACCCACAAGTG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCACTAAGCTCTCTGTTTaGTGTACAACACCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCTKLSV*CTTPLS
Trigger: TGAGAGGGGTGTTGTACAGCAAACAGAGAGCTTAGT...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAACTAAGCTCTCTGTTTaGTGTACAACACCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRTKLSV*CTTPLS
Trigger: TGAGAGGGGTGTTGTACAGCAAACAGAGAGCTTAGT...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCAATTCCAGTTCTCTTaGATCAAAAACAGATACCAG +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIQFQFS*IKNRYQ
Trigger: CTGGTATCTGTTTTTGATGCAAGAGAACTGGAATTG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGATTGGGCCAAATGCTaGCAGTTTGGCTTGAACCAC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIDWAKC*QFGLNH
Trigger: GTGGTTCAAGCCAAACTGGCAGCATTTGGCCCAATC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGATTGGGCCAAATGCTaGCAGTTTGGCTTGAACCAC +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFDWAKC*QFGLNH
Trigger: GTGGTTCAAGCCAAACTGGCAGCATTTGGCCCAATC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGGAGATTGGGCCAAATaGTGCCAGTTTGGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWGDWAK*CQFGLN
Trigger: GTTCAAGCCAAACTGGCAGCATTTGGCCCAATCTCC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACATGATGCCCGAGTATaGATGGAACATGAAAATGGA +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKHDARV*MEHENG
Trigger: TCCATTTTCATGTTCCATGCATACTCGGGCATCATG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGCAACCTTTATCTGCTaGTTGGAGAATGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWATFIC*LENASP
Trigger: AGGGCTGGCATTCTCCAAGCAGCAGATAAAGGTTGC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCTGGGAGGTGGAGGTTaGAGTGAGCTCATGTGCCAC +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPLGGGG*SELMCH
Trigger: GTGGCACATGAGCTCACTGCAACCTCCACCTCCCAG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCTTAGCATTATATTCTTaGGGGGTGGCACAACTGCTG +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCLALYS*GVAQLL
Trigger: CAGCAGTTGTGCCACCCCGCAAGAATATAATGCTAA...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGACAGCTCCTCGGAATaGAGTTACCACTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNDSSSE*SYHSES
Trigger: AGATTCAGAGTGGTAACTGCATTCCGAGGAGCTGTC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTTACAAAGCTGGGCTTTaGGCCCGTCGCCACAAGCTG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPYKAGL*ARRHKL
Trigger: CAGCTTGTGGCGACGGGCGCAAAGCCCAGCTTTGTA...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644030.1
CDS-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTTCTCTGGGATTGGCTaGCTACAAAGCTGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFFSGIG*LQSWAL
Trigger: CAAAGCCCAGCTTTGTAGGCAGCCAATCCCAGAGAA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000644030.1
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCAGGGTCATGTTCTCTaGCATGGAGCTCTGGGCGGC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHQGHVL*HGALGG
Trigger: GCCGCCCAGAGCTCCATGCCAGAGAACATGACCCTG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCAAGATAATGAGGTTCTaGGCTTGCCCCAGCGTGTAC +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFKIMRF*ACPSVY
Trigger: GTACACGCTGGGGCAAGCCCAGAACCTCATTATCTT...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTAAGATAATGAGGTTCTaGGCTTGCCCCAGCGTGTAC +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFKIMRF*ACPSVY
Trigger: GTACACGCTGGGGCAAGCCCAGAACCTCATTATCTT...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCCTCTCGGTGCCAAATTaGATTGGTGGTGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCLSVPN*IGGVTD
Trigger: ATCAGTAACACCACCAATCCAATTTGGCACCGAGAG...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCTCTCGGTGCCAAATTaGATTGGTGGTGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVLSVPN*IGGVTD
Trigger: ATCAGTAACACCACCAATCCAATTTGGCACCGAGAG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGCCTCTGGACTGGAATaGTTAGTTTCCCCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNASGLE*LVSPEN
Trigger: GTTTTCTGGGGAAACTAACCATTCCAGTCCAGAGGC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGAGGTACCCACTCACGTaGTCAGCTGGGAGCCTTCTG +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGRYPLT*SAGSLL
Trigger: CAGAAGGCTCCCAGCTGACCACGTGAGTGGGTACCT...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGTCGTGATGGCTCCCTaGCATGTCCTCGTCATCGGA +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPVVMAP*HVLVIG
Trigger: TCCGATGACGAGGACATGCCAGGGAGCCATCACGAC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTACTGTCCTCAGAAACTaGCCCATTAGAGCACACCTG +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFTVLRN*PIRAHL
Trigger: CAGGTGTGCTCTAATGGGCCAGTTTCTGAGGACAGT...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGCTCTCTGCAAGCTCTaGAAGATTTTCTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVALCKL*KIFWLI
Trigger: GATAAGCCAGAAAATCTTCCAGAGCTTGCAGAGAGC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATACTGGGTTGAGGCTCTaGGCCGCCTTCACCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHTGLRL*AAFTFL
Trigger: GAGGAAGGTGAAGGCGGCCCAGAGCCTCAACCCAGT...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTCCTGGCAGGATCACTaGGTTCTGTTTCAGAGGACA +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFSWQDH*VLFQRT
Trigger: TGTCCTCTGAAACAGAACCCAGTGATCCTGCCAGGA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATCCTGGCAGGATCACTaGGTTCTGTTTCAGAGGACA +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNISWQDH*VLFQRT
Trigger: TGTCCTCTGAAACAGAACCCAGTGATCCTGCCAGGA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATTCTCTCCCTCAGGCCTaGTGCTGGCTTCGCTCACAC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHSLPQA*CWLRSH
Trigger: GTGTGAGCGAAGCCAGCACCAGGCCTGAGGGAGAGA...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATACCGGCTAACATCCTaGCGCACTGAAGGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIYRLTS*RTEGSD
Trigger: ATCACTACCTTCAGTGCGCCAGGATGTTAGCCGGTA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATTGCCTCCCAGTTTGGTaGGAGAGCCTCGTCCACCCT +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHCLPVW*ESLVHP
Trigger: AGGGTGGACGAGGCTCTCCCACCAAACTGGGAGGCA...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGGCCTCTCATTGGTCATaGTTCTGCGGATACTCTGAT +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEASHWS*FCGYSD
Trigger: ATCAGAGTATCCGCAGAACCATGACCAATGAGAGGC...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACACGGTGAAGAACTCTaGGCTGATGAGGAACTTCAC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIHGEEL*ADEELH
Trigger: GTGAAGTTCCTCATCAGCCCAGAGTTCTTCACCGTG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCTCTACTGCTCTGAAGTaGGAGCCGGGGATCAATGAA +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFSTALK*EPGINE
Trigger: TTCATTGATCCCCGGCTCCCACTTCAGAGCAGTAGA...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATACCTCACCCGCACTGTaGCTGCGTTGCCTTGTCAGG +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYTSPAL*LRCLVR
Trigger: CCTGACAAGGCAACGCAGCCACAGTGCGGGTGAGGT...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATATTGAATGTACTGGATaGCCTGGGAAGAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNIECTG*PGKNWW
Trigger: CCACCAGTTCTTCCCAGGCCATCCAGTACATTCAAT...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAATCAGTTCGGATAAATTaGATCTTCTCCCTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKSVRIN*IFSLSE
Trigger: CTCACTCAGGGAGAAGATCCAATTTATCCGAACTGA...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAAAAAGTTCCTCAGTTTaGCTTCGAAATCCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKKSSSV*LRNPAC
Trigger: ACAAGCGGGATTTCGAAGCCAAACTGAGGAACTTTT...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
46% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AACCATGTCCTGGTACTGTGGCCTACTGACTGTATTGAATGTACTGGATGGCCTAAAAGTTCCTCAGTTTaGCTTCGAAATCCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: NHVLVLWPTDCIECTGWPKSSSV*LRNPAC
Trigger: ACAAGCGGGATTTCGAAGCCAAACTGAGGAACTTTT...AGGCCATCCAGTACATTCAATACAGTCAGTAGGCCACAGTACCAGGACATGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTAAGCATGGAAAAGGATaGGTAGGGAGGCAGATCCAG +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFKHGKG*VGRQIQ
Trigger: CTGGATCTGCCTCCCTACCCATCCTTTTCCATGCTT...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGAAGCATGGAAAAGGATaGGTAGGGAGGCAGATCCAG +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWKHGKG*VGRQIQ
Trigger: CTGGATCTGCCTCCCTACCCATCCTTTTCCATGCTT...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAATGTAAACCCATAGGCTaGCAAACCATATGTCAATCC +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKCKPIG*QTICQS
Trigger: GGATTGACATATGGTTTGCCAGCCTATGGGTTTACA...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCAGCCACAACCCAGATaGAACATGATGCTTGTACCC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWQPQPR*NMMLVP
Trigger: GGGTACAAGCATCATGTTCCATCTGGGTTGTGGCTG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCAGCCACAACCCAGATaGAACATGATGCTTGTACCC +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFQPQPR*NMMLVP
Trigger: GGGTACAAGCATCATGTTCCATCTGGGTTGTGGCTG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGCAACTGCCAGCATGGTaGCTCACACCTATAATTACT +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLQLPAW*LTPIIT
Trigger: AGTAATTATAGGTGTGAGCCACCATGCTGGCAGTTG...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCCAACTGCCAGCATGGTaGCTCACACCTATAATTACT +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCQLPAW*LTPIIT
Trigger: AGTAATTATAGGTGTGAGCCACCATGCTGGCAGTTG...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAAAGATGGAAGTAAAATaGCTAAGGTCCAGAGTGCTG +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKKMEVK*LRSRVL
Trigger: CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTT...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGTTATCATCCTTTCAGTaGGCAGTAGCTGGCCTTAAG +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLLSSFQ*AVAGLK
Trigger: CTTAAGGCCAGCTACTGCCCACTGAAAGGATGATAA...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCTCCATTCACAGAATTaGCTCCAAGTATTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVLHSQN*LQVLCQ
Trigger: TTGGCACAATACTTGGAGTCAATTCTGTGAATGGAG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCCTCCATTCACAGAATTaGCTCCAAGTATTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCLHSQN*LQVLCQ
Trigger: TTGGCACAATACTTGGAGTCAATTCTGTGAATGGAG...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTATGAAGCATGGCATTaGGTCTTGTGTCAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNYEAWH*VLCQWE
Trigger: TTCCCACTGACACAAGACTCAATGCCATGCTTCATA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGTATGAAGCATGGCATTaGGTCTTGTGTCAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEYEAWH*VLCQWE
Trigger: TTCCCACTGACACAAGACTCAATGCCATGCTTCATA...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTTCTGCACTGGCTTGGTaGAAGTCAGCTTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPSALAW*KSASSP
Trigger: AGGGGAGGAAGCTGACTTTCACCAAGCCAGTGCAGA...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTCTGCACTGGCTTGGTaGAAGTCAGCTTCCTCCCCT +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLSALAW*KSASSP
Trigger: AGGGGAGGAAGCTGACTTTCACCAAGCCAGTGCAGA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGATCTGGAGGTAGAGTaGGGCAGGATGTTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPDLEVE*GRMFSR
Trigger: ACGGGAGAACATCCTGCCTCACTCTACCTCCAGATC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGATCTGGAGGTAGAGTaGGGCAGGATGTTCTCCCGT +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGDLEVE*GRMFSR
Trigger: ACGGGAGAACATCCTGCCTCACTCTACCTCCAGATC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTCCCTCCGGACTTTGGTaGTCATGTGCTTCAAACACG +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTPSGLW*SCASNT
Trigger: CGTGTTTGAAGCACATGATCACCAAAGTCCGGAGGG...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTTCTCCCTGAGTGAGTaGTTCCTGGTAAGATCAGGT +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFFSLSE*FLVRSG
Trigger: ACCTGATCTTACCAGGAATCACTCACTCAGGGAGAA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGATCTTCTCCCTGAGTaGGTGATTCCTGGTAAGATC +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFDLLPE*VIPGKI
Trigger: GATCTTACCAGGAATCACTCACTCAGGGAGAAGATC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCGATCTTCTCCCTGAGTaGGTGATTCCTGGTAAGATC +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFDLLPE*VIPGKI
Trigger: GATCTTACCAGGAATCACTCACTCAGGGAGAAGATC...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGATCTTCTCCCTGAGTaGGTGATTCCTGGTAAGATC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIDLLPE*VIPGKI
Trigger: GATCTTACCAGGAATCACTCACTCAGGGAGAAGATC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGAAGGTCTGCATCGCTTaGAAGGCGCACCAATCCTGG +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLKVCIA*KAHQSW
Trigger: CCAGGATTGGTGCGCCTTTCAAGCGATGCAGACCTT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGTACCTGGCGAGTTCTaGGGAGATGACACGGGAGAG +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHVPGEF*GDDTGE
Trigger: CTCTCCCGTGTCATCTCCTCAGAACTCGCCAGGTAC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCCAAGGATCCTACCACTaGATCGGAACCATTCATGGT +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFQGSYH*IGTIHG
Trigger: ACCATGAATGGTTCCGATTCAGTGGTAGGATCCTTG...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATATAAAAGGGCCGTGTaGAGAAGGCATCCAACAAAT +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRYKRAV*RRHPTN
Trigger: ATTTGTTGGATGCCTTCTTCACACGGCCCTTTTATA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACACCGAATTACAATATaGTTGTCATGGTATCCTCCT +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKHRITI*LSWYPP
Trigger: AGGAGGATACCATGACAATCATATTGTAATTCGGTG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACCACCGAATTACAATATaGTTGTCATGGTATCCTCCT +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHHRITI*LSWYPP
Trigger: AGGAGGATACCATGACAATCATATTGTAATTCGGTG...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp AGAATTGACTCCAAGTATTGTGCCAACAGCTTCTGGAGAGGCATCCGATGGCTTCACCGAATTACAATATaGTTGTCATGGTATCCTCCT +
Preference number: 4 (lower is better)
Translates to: RIDSKYCANSFWRGIRWLHRITI*LSWYPP
Trigger: AGGAGGATACCATGACAATCATATTGTAATTCGGTG...AAGCCATCGGATGCCTCTCCAGAAGCTGTTGGCACAATACTTGGAGTCAATTCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGTAGACACGGCACTGTaGAGGAAGTTTGATTTAGAA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRVDTAL*RKFDLE
Trigger: TTCTAAATCAAACTTCCTTCACAGTGCCGTGTCTAC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGTAGACACGGCACTGTaGAGGAAGTTTGATTTAGAA +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVVDTAL*RKFDLE
Trigger: TTCTAAATCAAACTTCCTTCACAGTGCCGTGTCTAC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTACTCTACTACACTGTaGGCTGAGCTTTTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNYSTTL*AELFKG
Trigger: GCCTTTGAAAAGCTCAGCTCACAGTGTAGTAGAGTA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCAACGGACGATGTACCTaGCAGCACTTTGAAACTATA +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCNGRCT*QHFETI
Trigger: TATAGTTTCAAAGTGCTGTCAGGTACATCGTCCGTT...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATCACGGTCATCCTTCCTaGCAGCTCCTCGGAATGCAG +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYHGHPS*QLLGMQ
Trigger: CTGCATTCCGAGGAGCTGTCAGGAAGGATGACCGTG...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGATAGTAACCAGAAGTTaGCTGATGGTTCCTTACCTG +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLIVTRS*LMVPYL
Trigger: CAGGTAAGGAACCATCAGTCAACTTCTGGTTACTAT...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAAACTCCTTTTCTTCATaGAGCCATCACCTTATCTGT +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKNSFSS*SHHLIC
Trigger: ACAGATAAGGTGATGGCTTCATGAAGAAAAGGAGTT...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
44% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000644256.1
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAAATAAGCTGAGTGAGTaGTTCCTGGTAAGATCAGGT +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRNKLSE*FLVRSG
Trigger: ACCTGATCTTACCAGGAATCACTCACTCAGCTTATT...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644421.1
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCTCACAAAAAGCAGGTaGTCCCGGGCTGAACTAGCC +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPLTKSR*SRAELA
Trigger: GGCTAGTTCAGCCCGGGAGCACCTGCTTTTTGTGAG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTACAAGTTTTCGAGAATaGAGGTTTCCTGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVTSFRE*RFPEAP
Trigger: AGGTGCTTCAGGAAACCTGCATTCTCGAAAACTTGT...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATTACAGTGGCCGATTCTaGCCCTGGCCCTTCATCCTC +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYYSGRF*PWPFIL
Trigger: GAGGATGAAGGGCCAGGGGCAGAATCGGCCACTGTA...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCCACGTAGAAGATCCTaGCGTGGCTGTCAATGCGTG +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGPRRRS*RGCQCV
Trigger: CACGCATTGACAGCCACGGCAGGATCTTCTACGTGG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCCACGTAGAAGATCCTaGCGTGGCTGTCAATGCGTG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPPRRRS*RGCQCV
Trigger: CACGCATTGACAGCCACGGCAGGATCTTCTACGTGG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATATGGAGTTAGATCTCTaGAGCACCTGCGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHMELDL*STCGAG
Trigger: CCCAGCCCCGCAGGTGCTGCAGAGATCTAACTCCAT...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCATTGGTCATGGTTCTaGGGATACTCTGATATCGCC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWHWSWF*GYSDIA
Trigger: GGCGATATCAGAGTATCCGCAGAACCATGACCAATG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACATTGGTCATGGTTCTaGGGATACTCTGATATCGCC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIHWSWF*GYSDIA
Trigger: GGCGATATCAGAGTATCCGCAGAACCATGACCAATG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp GTCCAAAAGTACTGGTTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATGGCTCCCGTCGGAAATCTaGACTGGCTTGGTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: VQKYWFLQLLSTVFHKAWLPSEI*TGLVKV
Trigger: GACTTTCACCAAGCCAGTGCAGATTTCCGACGGGAG...CCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGTACTTTTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCGCACTAGGGTTAGAATaGAGCACGGTGAAGAACTCT +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFALGLE*STVKNS
Trigger: AGAGTTCTTCACCGTGCTGCATTCTAACCCTAGTGC...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGCACTGTGGCTGCGTTaGCTTGTCAGGTGTTGCCGA +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHALWLR*LVRCCR
Trigger: TCGGCAACACCTGACAAGGCAACGCAGCCACAGTGC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAAAGAACTGGTGGTCCTaGATGTCGAGAATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIKNWWS*MSRIFS
Trigger: GGAGAAGATTCTCGACATGCAGGACCACCAGTTCTT...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGTATTTCAGCTGTGCCTaGGATGACCAATTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEYFSCA*DDQFQF
Trigger: GAACTGGAATTGGTCATCGCAGGCACAGCTGAAATA...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTAGCGGAAACCTATGGTaGACACCATGCAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTSGNLW*TPCRHS
Trigger: TGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCT...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCATGATGCCCGAGTATaGATGGAACATGAAAATGGA +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVHDARV*MEHENG
Trigger: TCCATTTTCATGTTCCATGCATACTCGGGCATCATG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCATATGTCAATCCAATaGTTTTATGACCCCCAATTT +
Preference number: 4 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIHMSIQ*FYDPQF
Trigger: AAATTGGGGGTCATAAAAGCATTGGATTGACATATG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGAATGCAACCTTTATCTaGTGCTTGGAGAATGCCAGC +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEENATFI*CLENAS
Trigger: GCTGGCATTCTCCAAGCAGCAGATAAAGGTTGCATT...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACTCAAAATCTTTGAGTTaGTCCTTCACAGATCAGCTC +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHSKSLS*SFTDQL
Trigger: GAGCTGATCTGTGAAGGAGCAACTCAAAGATTTTGA...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGACAGCTCCTCGGAATaGAGTTACCACTCTGAATCT +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWDSSSE*SYHSES
Trigger: AGATTCAGAGTGGTAACTGCATTCCGAGGAGCTGTC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAAAGTCCCAGTTTCCCTaGAGAACCAAACCATCCAAC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIKSQFP*RTKPSN
Trigger: GTTGGATGGTTTGGTTCTCCAGGGAAACTGGGACTT...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260983.8
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGCCTCTGGACTGGAATaGTTAGTTTCCCCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWASGLE*LVSPEN
Trigger: GTTTTCTGGGGAAACTAACCATTCCAGTCCAGAGGC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGCCTCTGGACTGGAATaGTTAGTTTCCCCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFASGLE*LVSPEN
Trigger: GTTTTCTGGGGAAACTAACCATTCCAGTCCAGAGGC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTACTCACGTGGTCAGCTaGGAGCCTTCTGCCAAGGTT +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPTHVVS*EPSAKV
Trigger: AACCTTGGCAGAAGGCTCCCAGCTGACCACGTGAGT...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATGTGCCAACAGCTTCTaGAGAGGCATCTTCATGAAC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNICANSF*RGIFMN
Trigger: GTTCATGAAGATGCCTCTCCAGAAGCTGTTGGCACA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260983.8
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTAAGCAGCTTCGTGTGTaGAGGCTTCCTCATTCTCAA +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFKQLRV*RLPHSQ
Trigger: TTGAGAATGAGGAAGCCTCCACACACGAAGCTGCTT...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGCTCTCTGCAAGCTCTaGAAGATTTTCTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNALCKL*KIFWLI
Trigger: GATAAGCCAGAAAATCTTCCAGAGCTTGCAGAGAGC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCTTCATCCTCCCCACTaGGCACCTGTACCACAGGTA +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGLHPPH*APVPQV
Trigger: TACCTGTGGTACAGGTGCCCAGTGGGGAGGATGAAG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGTCGGAAATCTGCACTaGCTTGGTGAAAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIVGNLH*LGESQL
Trigger: AAGCTGACTTTCACCAAGCCAGTGCAGATTTCCGAC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGTCGGAAATCTGCACTaGCTTGGTGAAAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWVGNLH*LGESQL
Trigger: AAGCTGACTTTCACCAAGCCAGTGCAGATTTCCGAC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GTCCAAAAGTACTGGTTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATGGCCTGGGAAGAACTGGTaGTCCTGCATGTCGAGAATC +
Preference number: 4 (lower is better)
Translates to: VQKYWFLQLLSTVFHKAWPGKNW*SCMSRI
Trigger: GATTCTCGACATGCAGGACCACCAGTTCTTCCCAGG...CCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGTACTTTTGGAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTGGCCTGGGAAGAACTaGTGGTCCTGCATGTCGAGA +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLWPGKN*WSCMSR
Trigger: TCTCGACATGCAGGACCACCAGTTCTTCCCAGGCCA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTGGCCTGGGAAGAACTaGTGGTCCTGCATGTCGAGA +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGWPGKN*WSCMSR
Trigger: TCTCGACATGCAGGACCACCAGTTCTTCCCAGGCCA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTATGTACTGGATGGCCTaGGAAGAACTGGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTMYWMA*EELVVL
Trigger: CAGGACCACCAGTTCTTCCCAGGCCATCCAGTACAT...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAATTGAATGTACTGGATaGCCTGGGAAGAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIIECTG*PGKNWW
Trigger: CCACCAGTTCTTCCCAGGCCATCCAGTACATTCAAT...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCATTGAATGTACTGGATaGCCTGGGAAGAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFIECTG*PGKNWW
Trigger: CCACCAGTTCTTCCCAGGCCATCCAGTACATTCAAT...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGATTGAATGTACTGGATaGCCTGGGAAGAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWIECTG*PGKNWW
Trigger: CCACCAGTTCTTCCCAGGCCATCCAGTACATTCAAT...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGCCTGTCCACAGAGATaGGCATTCAGCTTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGACPQR*AFSFQV
Trigger: GACCTGGAAGCTGAATGCCCATCTCTGTGGACAGGC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGGAGCTGATCATGTATaGGTTCATCTTTGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRGADHV*VHLCLG
Trigger: TCCAAGACAAAGATGAACCCATACATGATCAGCTCC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGGAGCTGATCATGTATaGGTTCATCTTTGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVGADHV*VHLCLG
Trigger: TCCAAGACAAAGATGAACCCATACATGATCAGCTCC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTGTAAACCCATAGGCTaGCAAACCATATGTCAATCC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVCKPIG*QTICQS
Trigger: GGATTGACATATGGTTTGCCAGCCTATGGGTTTACA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAATCTCAAAGAAATGTTTaGGCAATGCCTGTAAACCCA +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKSQRNV*AMPVNP
Trigger: TGGGTTTACAGGCATTGCCCAAACATTTCTTTGAGA...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCCTTTATCTGCTGCTTaGAGAATGCCAGCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWPLSAA*RMPALK
Trigger: TTTCAGGGCTGGCATTCTCCAAGCAGCAGATAAAGG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGGGTGGCACAACTGCTaGGCTCCTCTTTCCTCCTTT +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGGWHNC*APLSSF
Trigger: AAAGGAGGAAAGAGGAGCCCAGCAGTTGTGCCACCC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
44% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR CAA 72 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTaGCGGGGTGGCACAACTGCTGGGCTCCTCTTTCCT +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIF*RGGTTAGLLFP
Trigger: AGGAAAGAGGAGCCCAGCAGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATCTTTCCTGGCTGAATTaGCATCTTAAGATAAGGGTC +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNLSWLN*HLKIRV
Trigger: GACCCTTATCTTAAGATGTCAATTCAGCCAGGAAAG...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTCATTGAGTGAATCCTaGCGTCCTCTGGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGSLSES*RPLGGE
Trigger: CTCACCTCCCAGAGGACGTCAGGATTCACTCAATGA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTCATTGAGTGAATCCTaGCGTCCTCTGGGAGGTGAG +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLSLSES*RPLGGE
Trigger: CTCACCTCCCAGAGGACGTCAGGATTCACTCAATGA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATATGAAGCATGGCATTaGGTCTTGTGTCAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIYEAWH*VLCQWE
Trigger: TTCCCACTGACACAAGACTCAATGCCATGCTTCATA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCCGTCTTCCTCCTCCTaGGAAGAAAAGGCTGGGGTT +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHPSSSS*EEKAGV
Trigger: AACCCCAGCCTTTTCTTCTCAGGAGGAGGAAGACGG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCCCTCCGGACTTTGGTaGTCATGTGCTTCAAACACG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPPSGLW*SCASNT
Trigger: CGTGTTTGAAGCACATGATCACCAAAGTCCGGAGGG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCCCTCCGGACTTTGGTaGTCATGTGCTTCAAACACG +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGPSGLW*SCASNT
Trigger: CGTGTTTGAAGCACATGATCACCAAAGTCCGGAGGG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTAATGCCTTGCCCTGGTaGTCATGTTTCATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFNALPW*SCFISH
Trigger: ATGGGAAATGAAACATGATCACCAGGGCAAGGCATT...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAAATGCCTTGCCCTGGTaGTCATGTTTCATTTCCCAT +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNINALPW*SCFISH
Trigger: ATGGGAAATGAAACATGATCACCAGGGCAAGGCATT...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACTCAAAGATATTGGGTTaGCGTAGAAATGCAACAATC +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHSKILG*RRNATI
Trigger: GATTGTTGCATTTCTACGTCAACCCAATATCTTTGA...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCCTGGTAAGATCAGGTTaGCGCTCCTGTAGAATTTCA +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFLVRSG*RSCRIS
Trigger: TGAAATTCTACAGGAGCGTCAACCTGATCTTACCAG...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCGGAACCATTCATGGTaGTTGTCTACAAAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFRNHSW*LSTKAD
Trigger: GTCTGCTTTTGTAGACAATCACCATGAATGGTTCCG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTATAAAAGGGCCGTGTaGAGAAGGCATCCAACAAAT +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNYKRAV*RRHPTN
Trigger: ATTTGTTGGATGCCTTCTTCACACGGCCCTTTTATA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCTAGAAGGCAGCTTCTaGACCTGCCTGTCCACAGAG +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHLEGSF*TCLSTE
Trigger: CTCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAAAGGAAGCATCCTCTTaGAACTTCCAATGTTCAATC +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRKEASS*NFQCSI
Trigger: GATTGAACATTGGAAGTTTCAAGAGGATGCTTCCTT...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTTCCAGTCCCCAAATGTaGCAGAGCACTTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPSSPQM*QSTCSW
Trigger: CCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGA...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGCAGTCAAGAACTGTTaGTTGAAAGACGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIAVKNC*LKDGWV
Trigger: AACCCAACCGTCTTTCAATCAACAGTTCTTGACTGC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGCAGTCAAGAACTGTTaGTTGAAAGACGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWAVKNC*LKDGWV
Trigger: AACCCAACCGTCTTTCAATCAACAGTTCTTGACTGC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGCAGTCAAGAACTGTTaGTTGAAAGACGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFAVKNC*LKDGWV
Trigger: AACCCAACCGTCTTTCAATCAACAGTTCTTGACTGC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGTTTCAAGATTCTCCTaGGTCCCTAAAAATTACCGT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVVSRFS*VPKNYR
Trigger: ACGGTAATTTTTAGGGACTCAGGAGAATCTTGAAAC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACTGTGTACTTTTTCCTaGTATGCTGTGATTAATTGC +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKLCTFS*YAVINC
Trigger: GCAATTAATCACAGCATATCAGGAAAAAGTACACAG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AACCATGTCCTGGTACTGTGGCCTACTGACTGTATTGAATGTACTGGATGGCCTCTGTGTACTTTTTCCTaGTATGCTGTGATTAATTGC +
Preference number: 4 (lower is better)
Translates to: NHVLVLWPTDCIECTGWPLCTFS*YAVINC
Trigger: GCAATTAATCACAGCATATCAGGAAAAAGTACACAG...AGGCCATCCAGTACATTCAATACAGTCAGTAGGCCACAGTACCAGGACATGGTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGCCCTTTTGTTTCCTTaGGAGTGCTTAAAAGGATAC +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNALLFP*ECLKGY
Trigger: GTATCCTTTTAAGCACTCTCAAGGAAACAAAAGGGC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGTAGACACGGCACTGTaGAGGAAGTTTGATTTAGAA +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNVDTAL*RKFDLE
Trigger: TTCTAAATCAAACTTCCTTCACAGTGCCGTGTCTAC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTACTCTACTACACTGTaGGCTGAGCTTTTCAAAGGC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWYSTTL*AELFKG
Trigger: GCCTTTGAAAAGCTCAGCTCACAGTGTAGTAGAGTA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACGTGACCATACTTCTTTaGCCAAGATCCATTCATTTT +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHVTILL*PRSIHF
Trigger: AAAATGAATGGATCTTGGTCAAAGAAGTATGGTCAC...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATAACGGACGATGTACCTaGCAGCACTTTGAAACTATA +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNNGRCT*QHFETI
Trigger: TATAGTTTCAAAGTGCTGTCAGGTACATCGTCCGTT...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAAACCCAGATGGAACATaGTGCTTGTACCCTACAAAG +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNINPDGT*CLYPTK
Trigger: CTTTGTAGGGTACAAGCATCATGTTCCATCTGGGTT...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATCTTGGAAACCTCACTaGATGTGGAATATACTGGTA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRSWKPH*MWNILV
Trigger: TACCAGTATATTCCACATTCAGTGAGGTTTCCAAGA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAATCTCATGTCAAGTCATaGAATGCAAATAAGTCTACG +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKSHVKS*NANKST
Trigger: CGTAGACTTATTTGCATTTCATGACTTGACATGAGA...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATATGCAGTTACCACTCTaGATCTTGACAGTTGGTCAA +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNMQLPL*ILTVGQ
Trigger: TTGACCAACTGTCAAGATTCAGAGTGGTAACTGCAT...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCAGCAAGCCCTAAGATaGTCCATCTACCGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWQQALR*SIYRCF
Trigger: AAAACAACGGTAGATGGATCATCTTAGGGCTTGCTG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGGCCATCTTATTCTGCTaGGCTGTTCAATTACGAAAG +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEAILFC*AVQLRK
Trigger: CTTTCGTAATTGAACAGCTCAGCAGAATAAGATGGC...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGATAGCTGATTCAGTTTaGATCACACAACACGGCTAT +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLIADSV*ITQHGY
Trigger: ATAGCCGTGTTGTGTGATTCAAACTGAATCAGCTAT...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATATAGTAACCAGAAGTTaGCTGATGGTTCCTTACCTG +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNIVTRS*LMVPYL
Trigger: CAGGTAAGGAACCATCAGTCAACTTCTGGTTACTAT...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATATGAGGTTCTGGGCTTaGCCCAGCGTGTACTCGTAC +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYMRFWA*PSVYSY
Trigger: GTACGAGTACACGCTGGGGCAAGCCCAGAACCTCAT...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGGAATATTTCTCTCGGTaGCAAATTGGATTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEEYFSR*QIGLVV
Trigger: CACCACCAATCCAATTTGGCACCGAGAGAAATATTC...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCACACAGTTCAGCACTaGCCTGGTCAGCACTGGGTT +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHHTVQH*PGQHWV
Trigger: AACCCAGTGCTGACCAGGGCAGTGCTGAACTGTGTG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGGTTTCAGGAAACCGTaGGCTCTCAAGAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLGFRKP*ALKRGA
Trigger: TGCTCCTCTCTTGAGAGCGCACGGTTTCCTGAAACC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCCACGTAGAAGATCCTaGCGTGGCTGTCAATGCGTG +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHPRRRS*RGCQCV
Trigger: CACGCATTGACAGCCACGGCAGGATCTTCTACGTGG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGTCAGCTTCCTCCCCTaGCCCATCAATAGCATTGGT +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLVSFLP*PINSIG
Trigger: ACCAATGCTATTGATGGGGCAGGGGAGGAAGCTGAC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGTCAGCTTCCTCCCCTaGCCCATCAATAGCATTGGT +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPVSFLP*PINSIG
Trigger: ACCAATGCTATTGATGGGGCAGGGGAGGAAGCTGAC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGCTCCCGTCGGAAATCTaGACTGGCTTGGTGAAAGTC +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLLPSEI*TGLVKV
Trigger: GACTTTCACCAAGCCAGTGCAGATTTCCGACGGGAG...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCCACAAAGAATGCCTTaGCCTGGTGATCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFPQRMP*PGDHVS
Trigger: TGAAACATGATCACCAGGGCAAGGCATTCTTTGTGG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAACTAAGCTCTCTGTTTaGTGTACAACACCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNITKLSV*CTTPLS
Trigger: TGAGAGGGGTGTTGTACAGCAAACAGAGAGCTTAGT...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCACTAAGCTCTCTGTTTaGTGTACAACACCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFTKLSV*CTTPLS
Trigger: TGAGAGGGGTGTTGTACAGCAAACAGAGAGCTTAGT...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCTATTTCAGCTGTGCCTaGGATGACCAATTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFYFSCA*DDQFQF
Trigger: GAACTGGAATTGGTCATCGCAGGCACAGCTGAAATA...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGAGCGGAAACCTATGGTaGACACCATGCAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLSGNLW*TPCRHS
Trigger: TGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTAGCGGAAACCTATGGTaGACACCATGCAGGCACTCA +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPSGNLW*TPCRHS
Trigger: TGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCT...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACTACACACATACCACTTaGATATACATTGTCACAGAC +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHYTHTT*IYIVTD
Trigger: GTCTGTGACAATGTATATGCAAGTGGTATGTGTGTA...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCAATGCAACCTTTATCTaGTGCTTGGAGAATGCCAGC +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFNATFI*CLENAS
Trigger: GCTGGCATTCTCCAAGCAGCAGATAAAGGTTGCATT...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGGAATGCCAATGATGTaGTTGTTCTCTCATCTAAGA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRGMPMM*LFSHLR
Trigger: TCTTAGATGAGAGAACAAGCACATCATTGGCATTCC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGGAATGCCAATGATGTaGTTGTTCTCTCATCTAAGA +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVGMPMM*LFSHLR
Trigger: TCTTAGATGAGAGAACAAGCACATCATTGGCATTCC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTCAAAATCTTTGAGTTaGTCCTTCACAGATCAGCTC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVSKSLS*SFTDQL
Trigger: GAGCTGATCTGTGAAGGAGCAACTCAAAGATTTTGA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGAGCTCATGTGCCACTaGACTCCAGCCTGGATGACA +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHELMCH*TPAWMT
Trigger: TGTCATCCAGGCTGGAGTGCAGTGGCACATGAGCTC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACTCTTCAGCATTCCTTTaGATCCATACTAGACAAACA +
Preference number: 4 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHSSAFL*IHTRQT
Trigger: TGTTTGTCTAGTATGGATGCAAAGGAATGCTGAAGA...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTAATGTGTACCGCATCTaGGGATTTCGACGCCTCACA +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTNVYRI*GFRRLT
Trigger: TGTGAGGCGTCGAAATCCCCAGATGCGGTACACATT...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTTGCTGGCAGTTAAGCTaGAGCGGCTCTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPCWQLS*SGSQKS
Trigger: TGACTTCTGAGAGCCGCTCCAGCTTAACTGCCAGCA...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTGCTGGCAGTTAAGCTaGAGCGGCTCTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLCWQLS*SGSQKS
Trigger: TGACTTCTGAGAGCCGCTCCAGCTTAACTGCCAGCA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTGCTGGCAGTTAAGCTaGAGCGGCTCTCAGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGCWQLS*SGSQKS
Trigger: TGACTTCTGAGAGCCGCTCCAGCTTAACTGCCAGCA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTATCCCAGAAGTTGGCTaGAGAATTCTCATCTATATG +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVIPEVG*RILIYM
Trigger: CATATAGATGAGAATTCTCCAGCCAACTTCTGGGAT...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCCCCATCATCACAGCTaGGTTCTTCACGGTGATGCA +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPPHHHS*VLHGDA
Trigger: TGCATCACCGTGAAGAACCCAGCTGTGATGATGGGG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCCTCTCGGTGCCAAATTaGATTGGTGGTGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFLSVPN*IGGVTD
Trigger: ATCAGTAACACCACCAATCCAATTTGGCACCGAGAG...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATGCATTTGATCACCGATaGCTTGTCGCTCCAGCAGCC +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYAFDHR*LVAPAA
Trigger: GGCTGCTGGAGCGACAAGCCATCGGTGATCAAATGC...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTACTGTCCTCAGAAACTaGCCCATTAGAGCACACCTG +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTTVLRN*PIRAHL
Trigger: CAGGTGTGCTCTAATGGGCCAGTTTCTGAGGACAGT...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGAATCCTGACGTCCTCTaGGAGGTGAGGTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLNPDVL*EVRSLK
Trigger: CTTCAAGGACCTCACCTCCCAGAGGACGTCAGGATT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGCTCCTCCAAGGAAGATaGGTAACCCAGGTCTTGCTG +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLLLQGR*VTQVLL
Trigger: CAGCAAGACCTGGGTTACCCATCTTCCTTGGAGGAG...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTCACACTCTCTGTCCTaGCAGGATCACTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGSHSLS*QDHWVL
Trigger: CAGAACCCAGTGATCCTGCCAGGACAGAGAGTGTGA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTTCACACTCTCTGTCCTaGCAGGATCACTGGGTTCTG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPSHSLS*QDHWVL
Trigger: CAGAACCCAGTGATCCTGCCAGGACAGAGAGTGTGA...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCCTCAGGCCTCTCATTaGTCATGGTTCTGCGGATAC +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPPQASH*SWFCGY
Trigger: GTATCCGCAGAACCATGACCAATGAGAGGCCTGAGG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGAACCAGCGCACTTGTaGGTCTACTGCTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLEPAHL*VYCSEV
Trigger: CACTTCAGAGCAGTAGACCCACAAGTGCGCTGGTTC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGAACCAGCGCACTTGTaGGTCTACTGCTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPEPAHL*VYCSEV
Trigger: CACTTCAGAGCAGTAGACCCACAAGTGCGCTGGTTC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp GCTCCTGTAGAATTTCAAAGATATTGGGTTGACGTAGAAATGCAACAATCTTGTGAACCAGCGCACTTGTaGGTCTACTGCTCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: APVEFQRYWVDVEMQQSCEPAHL*VYCSEV
Trigger: CACTTCAGAGCAGTAGACCCACAAGTGCGCTGGTTC...ACAAGATTGTTGCATTTCTACGTCAACCCAATATCTTTGAAATTCTACAGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTATGTACTGGATGGCCTaGGAAGAACTGGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPMYWMA*EELVVL
Trigger: CAGGACCACCAGTTCTTCCCAGGCCATCCAGTACAT...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGATGTACTGGATGGCCTaGGAAGAACTGGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGMYWMA*EELVVL
Trigger: CAGGACCACCAGTTCTTCCCAGGCCATCCAGTACAT...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTAAGGCGCACCAATCCTaGAGTCCCTTCAGTTCGGAT +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPKAHQS*SPFSSD
Trigger: ATCCGAACTGAAGGGACTCCAGGATTGGTGCGCCTT...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGCACACAGAATCTTCTTaGGCCGTTACTCCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLHTESS*AVTPSE
Trigger: CTCCGAGGGAGTAACGGCCCAAGAAGATTCTGTGTG...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCAAGTCCAAAAGTACTaGTTTCTTCAACTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVQVQKY*FLQLLS
Trigger: TGACAGCAGTTGAAGAAACCAGTACTTTTGGACTTG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGGTTGGGTTGTTCCCTaGGCATCAAGCTCACCCAAA +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPGWVVP*ASSSPK
Trigger: TTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGGAGCTGATCATGTATaGGTTCATCTTTGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNGADHV*VHLCLG
Trigger: TCCAAGACAAAGATGAACCCATACATGATCAGCTCC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAATGTCCCTTCACCTTTaGTACATTCAGTGCAAAATA +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKMSLHL*YIQCKI
Trigger: TATTTTGCACTGAATGTACCAAAGGTGAAGGGACAT...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATCTCAAAGAAATGTTTaGGCAATGCCTGTAAACCCA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRSQRNV*AMPVNP
Trigger: TGGGTTTACAGGCATTGCCCAAACATTTCTTTGAGA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTCTCAAAGAAATGTTTaGGCAATGCCTGTAAACCCA +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVSQRNV*AMPVNP
Trigger: TGGGTTTACAGGCATTGCCCAAACATTTCTTTGAGA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGGAAAGCCTAGTTATCTaGGTTCACAGTCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEESLVI*VHSPEE
Trigger: TTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTC...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCAAACAAACATCAAACTaGCACAGAGGGAATGCCAAT +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCKQTSN*HRGNAN
Trigger: ATTGGCATTCCCTCTGTGCCAGTTTGATGTTTGTTT...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCACTGCACTCCAGCATaGGTGACAGCCAGACCTTAT +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGHCTPA*VTARPY
Trigger: ATAAGGTCTGGCTGTCACCCATGCTGGAGTGCAGTG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGAAGTCAAGGCGGGTCTaGAGTTCTAAGGTGGCTGTG +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLKSRRV*SSKVAV
Trigger: CACAGCCACCTTAGAACTCCAGACCCGCCTTGACTT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647236.1
3UTR CAA 72 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTaGATTGAAAGACGGTTGGGTTGTTCCCTGGGCATC +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQEL*IERRLGCSLGI
Trigger: GATGCCCAGGGAACAACCCAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
3UTR CAA 72 bp CACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACTaGACCAGTATTGACATACTATTACTTGCCATTGCT +
Preference number: 4 (lower is better)
Translates to: HSRCVSASWLQH*TSIDILLLAIA
Trigger: AGCAATGGCAAGTAATAGTATGTCAATACTGGTCAAGTGTTGAAGCCAGGATGCACTTACACAACGAGAGTG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTTATCTCCGGTTCCATaGAATAGGGCCCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLLSPVP*NRAQAQ
Trigger: TTGAGCCTGGGCCCTATTTCATGGAACCGGAGATAA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTTATCTCCGGTTCCATaGAATAGGGCCCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGLSPVP*NRAQAQ
Trigger: TTGAGCCTGGGCCCTATTTCATGGAACCGGAGATAA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACTTTCCTGGCTGAATTaGCATCTTAAGATAAGGGTC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNILSWLN*HLKIRV
Trigger: GACCCTTATCTTAAGATGTCAATTCAGCCAGGAAAG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR TCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTTGCCAAGGTTGTAGCTaGGCATTTGATCACCGATGG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPCQGCS*AFDHRW
Trigger: CCATCGGTGATCAAATGCTCAGCTACAACCTTGGCA...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCTCCATTCACAGAATTaGCTCCAAGTATTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWLHSQN*LQVLCQ
Trigger: TTGGCACAATACTTGGAGTCAATTCTGTGAATGGAG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGGAGCTAGTCCTGAATaGATGCTTGGGGGTTCCATC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHGASPE*MLGGSI
Trigger: GATGGAACCCCCAAGCATTCATTCAGGACTAGCTCC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCATCTAAGTAATCATTaGGTGAATCCTGACGTCCTC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWHLSNH*VNPDVL
Trigger: GAGGACGTCAGGATTCACTCAATGATTACTTAGATG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCTCTTGCTGGAACTCGTaGTCTTCTTCATCTGAATCA +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFSCWNS*SSSSES
Trigger: TGATTCAGATGAAGAAGATCACGAGTTCCAGCAAGA...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATTGTTCGCGAACATGTTaGGGAATCCCACAAGGTCGC +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYCSRTC*GIPQGR
Trigger: GCGACCTTGTGGGATTCCTCAACATGTTCGCGAACA...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATCAAAGATATTGGGTTaGCGTAGAAATGCAACAATC +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRSKILG*RRNATI
Trigger: GATTGTTGCATTTCTACGTCAACCCAATATCTTTGA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTCAAAGATATTGGGTTaGCGTAGAAATGCAACAATC +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVSKILG*RRNATI
Trigger: GATTGTTGCATTTCTACGTCAACCCAATATCTTTGA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTATAAAAGGGCCGTGTaGAGAAGGCATCCAACAAAT +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFYKRAV*RRHPTN
Trigger: ATTTGTTGGATGCCTTCTTCACACGGCCCTTTTATA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATCACCGAATTACAATATaGTTGTCATGGTATCCTCCT +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNHRITI*LSWYPP
Trigger: AGGAGGATACCATGACAATCATATTGTAATTCGGTG...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGTTACTCCCTCGGAGTaGAGCAAATCCTTCATAGGG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPVTPSE*SKSFIG
Trigger: CCCTATGAAGGATTTGCTTCACTCCGAGGGAGTAAC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGTTACTCCCTCGGAGTaGAGCAAATCCTTCATAGGG +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGVTPSE*SKSFIG
Trigger: CCCTATGAAGGATTTGCTTCACTCCGAGGGAGTAAC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATTCCAGTCCCCAAATGTaGCAGAGCACTTGTTCCTGG +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYSSPQM*QSTCSW
Trigger: CCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGA...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTCAAGAACTGTTGATTaGAAGACGGTTGGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFSRTVD*KTVGLF
Trigger: GAACAACCCAACCGTCTTTCAATCAACAGTTCTTGA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTCAAGAACTGTTGATTaGAAGACGGTTGGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWSRTVD*KTVGLF
Trigger: GAACAACCCAACCGTCTTTCAATCAACAGTTCTTGA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGAAATTACCGTGGAGCTaGTCATGTATGGGTTCATCT +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWKLPWS*SCMGSS
Trigger: AGATGAACCCATACATGATCAGCTCCACGGTAATTT...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGCCCTTTTGTTTCCTTaGGAGTGCTTAAAAGGATAC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWALLFP*ECLKGY
Trigger: GTATCCTTTTAAGCACTCTCAAGGAAACAAAAGGGC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTACTACACTGTGAGCTaGGCTTTTCAAAGGCAGATT +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWYYTVS*AFQRQI
Trigger: AATCTGCCTTTGAAAAGCTCAGCTCACAGTGTAGTA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGTGGGATTTTTCACACTaGAAACCAATGGTGCATTGT +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEWDFSH*KPMVHC
Trigger: ACAATGCACCATTGGTTTTCAGTGTGAAAAATCCCA...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGCCACAAGCCATCCATaGAAATCAGCCACAACCCAG +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHATSHP*KSATTQ
Trigger: CTGGGTTGTGGCTGATTTTCATGGATGGCTTGTGGC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGTCTCATGTCAAGTCATaGAATGCAAATAAGTCTACG +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLSHVKS*NANKST
Trigger: CGTAGACTTATTTGCATTTCATGACTTGACATGAGA...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTACAAGTTTTCGAGAATaGAGGTTTCCTGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFTSFRE*RFPEAP
Trigger: AGGTGCTTCAGGAAACCTGCATTCTCGAAAACTTGT...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAACAAGTTTTCGAGAATaGAGGTTTCCTGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNITSFRE*RFPEAP
Trigger: AGGTGCTTCAGGAAACCTGCATTCTCGAAAACTTGT...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGACAAGTTTTCGAGAATaGAGGTTTCCTGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWTSFRE*RFPEAP
Trigger: AGGTGCTTCAGGAAACCTGCATTCTCGAAAACTTGT...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCACAAGTTTTCGAGAATaGAGGTTTCCTGAAGCACCT +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFTSFRE*RFPEAP
Trigger: AGGTGCTTCAGGAAACCTGCATTCTCGAAAACTTGT...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGAATATTTCTCTCGGTaGCAAATTGGATTGGTGGTG +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWEYFSR*QIGLVV
Trigger: CACCACCAATCCAATTTGGCACCGAGAGAAATATTC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCTAGTCCTGAATGAATaGTTGGGGGTTCCATCGGCA +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPLVLNE*LGVPSA
Trigger: TGCCGATGGAACCCCCAAGCATTCATTCAGGACTAG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGCTAGTCCTGAATGAATaGTTGGGGGTTCCATCGGCA +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLLVLNE*LGVPSA
Trigger: TGCCGATGGAACCCCCAAGCATTCATTCAGGACTAG...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGGTTTCAGGAAACCGTaGGCTCTCAAGAGAGGAGCA +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHGFRKP*ALKRGA
Trigger: TGCTCCTCTCTTGAGAGCGCACGGTTTCCTGAAACC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCTTCAGCTGCTCCATTTaGTGTATGGAGTTAGATCTC +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFFSCSI*CMELDL
Trigger: GAGATCTAACTCCATACAGCAAATGGAGCAGCTGAA...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTTCAGCTGCTCCATTTaGTGTATGGAGTTAGATCTC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWFSCSI*CMELDL
Trigger: GAGATCTAACTCCATACAGCAAATGGAGCAGCTGAA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTATCGCCGGTTCAGCTaGTCCATTTGCTGTATGGAG +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGYRRFS*SICCME
Trigger: CTCCATACAGCAAATGGAGCAGCTGAACCGGCGATA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGACAATTCCAGTTCTCTTaGATCAAAAACAGATACCAG +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRQFQFS*IKNRYQ
Trigger: CTGGTATCTGTTTTTGATGCAAGAGAACTGGAATTG...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTGTTGAATCTTTCCACTaGAGCCCAGAACCACCGAAT +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTVESFH*SPEPPN
Trigger: ATTCGGTGGTTCTGGGCTGCAGTGGAAAGATTCAAC...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGGAGATTGGGCCAAATaGTGCCAGTTTGGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPGDWAK*CQFGLN
Trigger: GTTCAAGCCAAACTGGCAGCATTTGGCCCAATCTCC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGGAGATTGGGCCAAATaGTGCCAGTTTGGCTTGAAC +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGGDWAK*CQFGLN
Trigger: GTTCAAGCCAAACTGGCAGCATTTGGCCCAATCTCC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGCACAGACCATCTTATTaGAAATCTGTAAAGGTACCT +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLHRPSY*KSVKVP
Trigger: AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTG...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACATGATGCCCGAGTATaGATGGAACATGAAAATGGA +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIHDARV*MEHENG
Trigger: TCCATTTTCATGTTCCATGCATACTCGGGCATCATG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGAATTGACTCCAAGTATTGTGCCAACAGCTTCTGGAGAGGCATCCGATGGCTTCATATGTCAATCCAATaGTTTTATGACCCCCAATTT +
Preference number: 4 (lower is better)
Translates to: RIDSKYCANSFWRGIRWLHMSIQ*FYDPQF
Trigger: AAATTGGGGGTCATAAAAGCATTGGATTGACATATG...AAGCCATCGGATGCCTCTCCAGAAGCTGTTGGCACAATACTTGGAGTCAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGCAACCTTTATCTGCTaGTTGGAGAATGCCAGCCCT +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLATFIC*LENASP
Trigger: AGGGCTGGCATTCTCCAAGCAGCAGATAAAGGTTGC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCCAAGGTGGGAGGACTaGTTGAGCTCAGGAGTTCAA +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHPRWED*LSSGVQ
Trigger: TTGAACTCCTGAGCTCAAGCAGTCCTCCCACCTTGG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATCTTCAGCATTCCTTTaGATCCATACTAGACAAACA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRSSAFL*IHTRQT
Trigger: TGTTTGTCTAGTATGGATGCAAAGGAATGCTGAAGA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCCATCCAACACATCCTaGGCAGCGGAAACCGAAATG +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHPSNTS*AAETEM
Trigger: CATTTCGGTTTCCGCTGCCCAGGATGTGTTGGATGG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260983.8
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTAATGTGTACCGCATCTaGGGATTTCGACGCCTCACA +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPNVYRI*GFRRLT
Trigger: TGTGAGGCGTCGAAATCCCCAGATGCGGTACACATT...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp GCTCCTGTAGAATTTCAAAGATATTGGGTTGACGTAGAAATGCAACAATCTTGTACTGTCCTCAGAAACTaGCCCATTAGAGCACACCTG +
Preference number: 4 (lower is better)
Translates to: APVEFQRYWVDVEMQQSCTVLRN*PIRAHL
Trigger: CAGGTGTGCTCTAATGGGCCAGTTTCTGAGGACAGT...ACAAGATTGTTGCATTTCTACGTCAACCCAATATCTTTGAAATTCTACAGGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATTGTCTGCGCCACTTGTaGGCTGATCTACCTCTTGAG +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHCLRHL*ADLPLE
Trigger: CTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACA...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTTCCTGGCAGGATCACTaGGTTCTGTTTCAGAGGACA +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPSWQDH*VLFQRT
Trigger: TGTCCTCTGAAACAGAACCCAGTGATCCTGCCAGGA...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCACGGTGAAGAACTCTaGGCTGATGAGGAACTTCAC +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPHGEEL*ADEELH
Trigger: GTGAAGTTCCTCATCAGCCCAGAGTTCTTCACCGTG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGTGGTGCGGGAGTTGTaGTCCACAAAGAATGCCTTG +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHVVREL*STKNAL
Trigger: CAAGGCATTCTTTGTGGACCACAACTCCCGCACCAC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTCTACTGCTCTGAAGTaGGAGCCGGGGATCAATGAA +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLSTALK*EPGINE
Trigger: TTCATTGATCCCCGGCTCCCACTTCAGAGCAGTAGA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTTCTACTGCTCTGAAGTaGGAGCCGGGGATCAATGAA +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPSTALK*EPGINE
Trigger: TTCATTGATCCCCGGCTCCCACTTCAGAGCAGTAGA...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATATGTACTGGATGGCCTaGGAAGAACTGGTGGTCCTG +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHMYWMA*EELVVL
Trigger: CAGGACCACCAGTTCTTCCCAGGCCATCCAGTACAT...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGACTGGAACCATGTCCTaGTACTGTGGCCTACTGACT +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLTGTMS*YCGLLT
Trigger: AGTCAGTAGGCCACAGTACCAGGACATGGTTCCAGT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTACTGGAACCATGTCCTaGTACTGTGGCCTACTGACT +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPTGTMS*YCGLLT
Trigger: AGTCAGTAGGCCACAGTACCAGGACATGGTTCCAGT...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTCAGTTCGGATAAATTaGATCTTCTCCCTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFSVRIN*IFSLSE
Trigger: CTCACTCAGGGAGAAGATCCAATTTATCCGAACTGA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATAAGGCGCACCAATCCTaGAGTCCCTTCAGTTCGGAT +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYKAHQS*SPFSSD
Trigger: ATCCGAACTGAAGGGACTCCAGGATTGGTGCGCCTT...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTAAAAGTTCCTCAGTTTaGCTTCGAAATCCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFKSSSV*LRNPAC
Trigger: ACAAGCGGGATTTCGAAGCCAAACTGAGGAACTTTT...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCACACAGAATCTTCTTaGGCCGTTACTCCCTCGGAG +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHHTESS*AVTPSE
Trigger: CTCCGAGGGAGTAACGGCCCAAGAAGATTCTGTGTG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGAAGCATGGAAAAGGATaGGTAGGGAGGCAGATCCAG +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLKHGKG*VGRQIQ
Trigger: CTGGATCTGCCTCCCTACCCATCCTTTTCCATGCTT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATCAAGTCCAAAAGTACTaGTTTCTTCAACTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNQVQKY*FLQLLS
Trigger: TGACAGCAGTTGAAGAAACCAGTACTTTTGGACTTG...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGATTGAATCTCCCAGATaGAAAAAGCTGTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLIESPR*KKLFSS
Trigger: AGAAGAGAACAGCTTTTTCCATCTGGGAGATTCAAT...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCTGTGAATTTTATCACTaGAACTCAGCTATTAGGGCT +
Preference number: 4 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCCEFYH*NSAIRA
Trigger: AGCCCTAATAGCTGAGTTCCAGTGATAAAATTCACA...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACAGCAAGAAGAAACATaGCATTCTTCCTTAAAATCA +
Preference number: 4 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKQQEET*HSSLKS
Trigger: TGATTTTAAGGAAGAATGCCATGTTTCTTCTTGCTG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATTTATCTCCGGTTCCATaGAATAGGGCCCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHLSPVP*NRAQAQ
Trigger: TTGAGCCTGGGCCCTATTTCATGGAACCGGAGATAA...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATTTATCTCCGGTTCCATaGAATAGGGCCCAGGCTCAA +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYLSPVP*NRAQAQ
Trigger: TTGAGCCTGGGCCCTATTTCATGGAACCGGAGATAA...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATTCCTCCAGCTTTGTCTaGGATGTCAGGCTTCCATCA +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHSSSFV*DVRLPS
Trigger: TGATGGAAGCCTGACATCTCAGACAAAGCTGGAGGA...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGATCTTCTCCCTGAGTaGGTGATTCCTGGTAAGATC +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGDLLPE*VIPGKI
Trigger: GATCTTACCAGGAATCACTCACTCAGGGAGAAGATC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCAAGGATCCTACCACTaGATCGGAACCATTCATGGT +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGQGSYH*IGTIHG
Trigger: ACCATGAATGGTTCCGATTCAGTGGTAGGATCCTTG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGCAAGGATCCTACCACTaGATCGGAACCATTCATGGT +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLQGSYH*IGTIHG
Trigger: ACCATGAATGGTTCCGATTCAGTGGTAGGATCCTTG...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCGGTCACATAGAATTCTaGGAAGAGCCTTATAAAAGG +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFGHIEF*EEPYKR
Trigger: CCTTTTATAAGGCTCTTCTCAGAATTCTATGTGACC...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGGTCACATAGAATTCTaGGAAGAGCCTTATAAAAGG +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFGHIEF*EEPYKR
Trigger: CCTTTTATAAGGCTCTTCTCAGAATTCTATGTGACC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCACCGAATTACAATATaGTTGTCATGGTATCCTCCT +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWHRITI*LSWYPP
Trigger: AGGAGGATACCATGACAATCATATTGTAATTCGGTG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACACCGAATTACAATATaGTTGTCATGGTATCCTCCT +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIHRITI*LSWYPP
Trigger: AGGAGGATACCATGACAATCATATTGTAATTCGGTG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTGCAGTCAAGAACTGTTaGTTGAAAGACGGTTGGGTT +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTAVKNC*LKDGWV
Trigger: AACCCAACCGTCTTTCAATCAACAGTTCTTGACTGC...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGTTTCAAGATTCTCCTaGGTCCCTAAAAATTACCGT +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWVSRFS*VPKNYR
Trigger: ACGGTAATTTTTAGGGACTCAGGAGAATCTTGAAAC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTGGATACATATTAGCATaGTGCCCGAGTATGCATGGA +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTGYILA*CPSMHG
Trigger: TCCATGCATACTCGGGCATCATGCTAATATGTATCC...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGGAGAATGCCAGCCCTaGAACATCTTGTATACCATC +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLGECQP*NILYTI
Trigger: GATGGTATACAAGATGTTTCAGGGCTGGCATTCTCC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATACACTTGACCAGTATTaGCATACTATTACTTGCCAT +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNTLDQY*HTITCH
Trigger: ATGGCAAGTAATAGTATGTCAATACTGGTCAAGTGT...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGGTGACCATACTTCTTTaGCCAAGATCCATTCATTTT +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEVTILL*PRSIHF
Trigger: AAAATGAATGGATCTTGGTCAAAGAAGTATGGTCAC...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATTATCGCCGGTTCAGCTaGTCCATTTGCTGTATGGAG +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHYRRFS*SICCME
Trigger: CTCCATACAGCAAATGGAGCAGCTGAACCGGCGATA...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATTGGTCATGGTTCTaGGGATACTCTGATATCGCC +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPHWSWF*GYSDIA
Trigger: GGCGATATCAGAGTATCCGCAGAACCATGACCAATG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGAAGAACTGGTGGTCCTaGATGTCGAGAATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLKNWWS*MSRIFS
Trigger: GGAGAAGATTCTCGACATGCAGGACCACCAGTTCTT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp GTCCAAAAGTACTGGTTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATGGACTAAGCTCTCTGTTTaGTGTACAACACCCCTCTCA +
Preference number: 4 (lower is better)
Translates to: VQKYWFLQLLSTVFHKAWTKLSV*CTTPLS
Trigger: TGAGAGGGGTGTTGTACAGCAAACAGAGAGCTTAGT...CCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGTACTTTTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR GCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTACTGGTTTCTTCAACTaGTGTCAACAGTTTTTCATA +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVTGFFN*CQQFFI
Trigger: TATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGT...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAACTGGTTTCTTCAACTaGTGTCAACAGTTTTTCATA +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRTGFFN*CQQFFI
Trigger: TATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGT...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATGATTGGGCCAAATGCTaGCAGTTTGGCTTGAACCAC +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYDWAKC*QFGLNH
Trigger: GTGGTTCAAGCCAAACTGGCAGCATTTGGCCCAATC...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGCACAGACCATCTTATTaGAAATCTGTAAAGGTACCT +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEHRPSY*KSVKVP
Trigger: AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTG...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTACACACATACCACTTaGATATACATTGTCACAGAC +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNYTHTT*IYIVTD
Trigger: GTCTGTGACAATGTATATGCAAGTGGTATGTGTGTA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGACATATGTCAATCCAATaGTTTTATGACCCCCAATTT +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRHMSIQ*FYDPQF
Trigger: AAATTGGGGGTCATAAAAGCATTGGATTGACATATG...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATAAGATAATGAGGTTCTaGGCTTGCCCCAGCGTGTAC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHKIMRF*ACPSVY
Trigger: GTACACGCTGGGGCAAGCCCAGAACCTCATTATCTT...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp GTCCAAAAGTACTGGTTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATGGCTCTCGGTGCCAAATTaGATTGGTGGTGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: VQKYWFLQLLSTVFHKAWLSVPN*IGGVTD
Trigger: ATCAGTAACACCACCAATCCAATTTGGCACCGAGAG...CCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGTACTTTTGGAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATACTGTCCTCAGAAACTaGCCCATTAGAGCACACCTG +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHTVLRN*PIRAHL
Trigger: CAGGTGTGCTCTAATGGGCCAGTTTCTGAGGACAGT...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGAAGCAGCTTCGTGTGTaGAGGCTTCCTCATTCTCAA +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGKQLRV*RLPHSQ
Trigger: TTGAGAATGAGGAAGCCTCCACACACGAAGCTGCTT...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCTGAGAAGAAAAGGCTaGGGTTTCAGGAAACCGTGC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHLRRKG*GFRKPC
Trigger: GCACGGTTTCCTGAAACCCCAGCCTTTTCTTCTCAG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGCCTCTCATTGGTCATaGTTCTGCGGATACTCTGAT +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGASHWS*FCGYSD
Trigger: ATCAGAGTATCCGCAGAACCATGACCAATGAGAGGC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGTCGGAAATCTGCACTaGCTTGGTGAAAGTCAGCTT +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGVGNLH*LGESQL
Trigger: AAGCTGACTTTCACCAAGCCAGTGCAGATTTCCGAC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGATTGAATGTACTGGATaGCCTGGGAAGAACTGGTGG +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGIECTG*PGKNWW
Trigger: CCACCAGTTCTTCCCAGGCCATCCAGTACATTCAAT...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATACTGGAACCATGTCCTaGTACTGTGGCCTACTGACT +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHTGTMS*YCGLLT
Trigger: AGTCAGTAGGCCACAGTACCAGGACATGGTTCCAGT...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGTCATTGTAAGCCACTaGAACCATGTCCTGGTACTG +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLVIVSH*NHVLVL
Trigger: CAGTACCAGGACATGGTTCCAGTGGCTTACAATGAC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGTCATTGTAAGCCACTaGAACCATGTCCTGGTACTG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPVIVSH*NHVLVL
Trigger: CAGTACCAGGACATGGTTCCAGTGGCTTACAATGAC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTAAACAGATACCAGCCTaGCATCCACCACCTCATAGA +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPKQIPA*HPPPHR
Trigger: TCTATGAGGTGGTGGATGCCAGGCTGGTATCTGTTT...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGAAACAGATACCAGCCTaGCATCCACCACCTCATAGA +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGKQIPA*HPPPHR
Trigger: TCTATGAGGTGGTGGATGCCAGGCTGGTATCTGTTT...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGACAAATGGAAAAAGTTTaGCAGTCAAGAACTGTTGAT +
Preference number: 4 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRQMEKV*QSRTVD
Trigger: ATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTG...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCAAATGGAAAAAGTTTaGCAGTCAAGAACTGTTGAT +
Preference number: 4 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVQMEKV*QSRTVD
Trigger: ATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCAAATGCTGCCAGTTTaGCTTGAACCACGTTCAAGG +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGQMLPV*LEPRSR
Trigger: CCTTGAACGTGGTTCAAGCCAAACTGGCAGCATTTG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGCAAATGCTGCCAGTTTaGCTTGAACCACGTTCAAGG +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLQMLPV*LEPRSR
Trigger: CCTTGAACGTGGTTCAAGCCAAACTGGCAGCATTTG...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTCTCAAAGAAATGTTTaGGCAATGCCTGTAAACCCA +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWSQRNV*AMPVNP
Trigger: TGGGTTTACAGGCATTGCCCAAACATTTCTTTGAGA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGCCTTTATCTGCTGCTTaGAGAATGCCAGCCCTGAAA +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLPLSAA*RMPALK
Trigger: TTTCAGGGCTGGCATTCTCCAAGCAGCAGATAAAGG...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTATGAAGCATGGCATTaGGTCTTGTGTCAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGYEAWH*VLCQWE
Trigger: TTCCCACTGACACAAGACTCAATGCCATGCTTCATA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTATGAAGCATGGCATTaGGTCTTGTGTCAGTGGGAA +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLYEAWH*VLCQWE
Trigger: TTCCCACTGACACAAGACTCAATGCCATGCTTCATA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTCATCTGAATCAATATaGAGCATGGCATTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWSSESI*SMALSL
Trigger: AAGACTCAATGCCATGCTTCATATTGATTCAGATGA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATCAAAGATATTGGGTTaGCGTAGAAATGCAACAATC +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNISKILG*RRNATI
Trigger: GATTGTTGCATTTCTACGTCAACCCAATATCTTTGA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCTGGTAAGATCAGGTTaGCGCTCCTGTAGAATTTCA +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPLVRSG*RSCRIS
Trigger: TGAAATTCTACAGGAGCGTCAACCTGATCTTACCAG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATTTCTCCCTGAGTGAGTaGTTCCTGGTAAGATCAGGT +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHFSLSE*FLVRSG
Trigger: ACCTGATCTTACCAGGAATCACTCACTCAGGGAGAA...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGCCTCCCCAACGAAGGTaGCATATAGCTTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLPPQRR*HIAYFS
Trigger: AGAGAAATAAGCTATATGTCACCTTCGTTGGGGAGG...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCCTCCCCAACGAAGGTaGCATATAGCTTATTTCTCT +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGPPQRR*HIAYFS
Trigger: AGAGAAATAAGCTATATGTCACCTTCGTTGGGGAGG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCGGAACCATTCATGGTaGTTGTCTACAAAAGCAGAC +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGRNHSW*LSTKAD
Trigger: GTCTGCTTTTGTAGACAATCACCATGAATGGTTCCG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCTGTGTACTTTTTCCTaGTATGCTGTGATTAATTGC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWLCTFS*YAVINC
Trigger: GCAATTAATCACAGCATATCAGGAAAAAGTACACAG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATGGAGAATGCCAGCCCTaGAACATCTTGTATACCATC +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYGECQP*NILYTI
Trigger: GATGGTATACAAGATGTTTCAGGGCTGGCATTCTCC...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTACACTTGACCAGTATTaGCATACTATTACTTGCCAT +
Preference number: 4 (lower is better)
Translates to: THRLANHMSIQCFYDPQFTLDQY*HTITCH
Trigger: ATGGCAAGTAATAGTATGTCAATACTGGTCAAGTGT...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCAGCAAGCCCTAAGATaGTCCATCTACCGTTGTTTT +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPQQALR*SIYRCF
Trigger: AAAACAACGGTAGATGGATCATCTTAGGGCTTGCTG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCATTGGTCATGGTTCTaGGGATACTCTGATATCGCC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHHWSWF*GYSDIA
Trigger: GGCGATATCAGAGTATCCGCAGAACCATGACCAATG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGCCACAAAGAATGCCTTaGCCTGGTGATCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLPQRMP*PGDHVS
Trigger: TGAAACATGATCACCAGGGCAAGGCATTCTTTGTGG...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATAAGAACTGGTGGTCCTaGATGTCGAGAATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYKNWWS*MSRIFS
Trigger: GGAGAAGATTCTCGACATGCAGGACCACCAGTTCTT...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATAAGAACTGGTGGTCCTaGATGTCGAGAATCTTCTCC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHKNWWS*MSRIFS
Trigger: GGAGAAGATTCTCGACATGCAGGACCACCAGTTCTT...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACAATTCCAGTTCTCTTaGATCAAAAACAGATACCAG +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIQFQFS*IKNRYQ
Trigger: CTGGTATCTGTTTTTGATGCAAGAGAACTGGAATTG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTATTTCAGCTGTGCCTaGGATGACCAATTCCAGTTC +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLYFSCA*DDQFQF
Trigger: GAACTGGAATTGGTCATCGCAGGCACAGCTGAAATA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGTTGAATCTTTCCACTaGAGCCCAGAACCACCGAAT +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHVESFH*SPEPPN
Trigger: ATTCGGTGGTTCTGGGCTGCAGTGGAAAGATTCAAC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGACTGGTTTCTTCAACTaGTGTCAACAGTTTTTCATA +
Preference number: 4 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEETGFFN*CQQFFI
Trigger: TATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGT...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTACACACATACCACTTaGATATACATTGTCACAGAC +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWYTHTT*IYIVTD
Trigger: GTCTGTGACAATGTATATGCAAGTGGTATGTGTGTA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATCATATGTCAATCCAATaGTTTTATGACCCCCAATTT +
Preference number: 4 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNHMSIQ*FYDPQF
Trigger: AAATTGGGGGTCATAAAAGCATTGGATTGACATATG...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGACTATTACTTGCCATTaGTTCCCAATAGAAACAGCA +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWTITCH*FPIETA
Trigger: TGCTGTTTCTATTGGGAAGCAATGGCAAGTAATAGT...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCTCTCGTTGTGTAAGTaGATCCTGGCTTCAACACTT +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGLSLCK*ILASTL
Trigger: AAGTGTTGAAGCCAGGATGCACTTACACAACGAGAG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATGCCTCTGGACTGGAATaGTTAGTTTCCCCAGAAAAC +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYASGLE*LVSPEN
Trigger: GTTTTCTGGGGAAACTAACCATTCCAGTCCAGAGGC...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGCTCTCTGCAAGCTCTaGAAGATTTTCTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPALCKL*KIFWLI
Trigger: GATAAGCCAGAAAATCTTCCAGAGCTTGCAGAGAGC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTTTATCATCCTTTCAGTaGGCAGTAGCTGGCCTTAAG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPLSSFQ*AVAGLK
Trigger: CTTAAGGCCAGCTACTGCCCACTGAAAGGATGATAA...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGTCTTCTCCATGAAGTaGGTAGCATGTGGATTGGCT +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHVFSMK*VACGLA
Trigger: AGCCAATCCACATGCTACCCACTTCATGGAGAAGAC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644256.1
CDS-3UTR TCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCTAAGTAATCATTaGGTGAATCCTGACGTCCTC +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPHLSNH*VNPDVL
Trigger: GAGGACGTCAGGATTCACTCAATGATTACTTAGATG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTCTTGCTGGAACTCGTaGTCTTCTTCATCTGAATCA +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGSCWNS*SSSSES
Trigger: TGATTCAGATGAAGAAGATCACGAGTTCCAGCAAGA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTTATAAAAGGGCCGTGTaGAGAAGGCATCCAACAAAT +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPYKRAV*RRHPTN
Trigger: ATTTGTTGGATGCCTTCTTCACACGGCCCTTTTATA...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp GTCCAAAAGTACTGGTTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATGGAAGGAAGCATCCTCTTaGAACTTCCAATGTTCAATC +
Preference number: 4 (lower is better)
Translates to: VQKYWFLQLLSTVFHKAWKEASS*NFQCSI
Trigger: GATTGAACATTGGAAGTTTCAAGAGGATGCTTCCTT...CCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGTACTTTTGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTCAAGAACTGTTGATTaGAAGACGGTTGGGTTGTTC +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGSRTVD*KTVGLF
Trigger: GAACAACCCAACCGTCTTTCAATCAACAGTTCTTGA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGGATACATATTAGCATaGTGCCCGAGTATGCATGGA +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHGYILA*CPSMHG
Trigger: TCCATGCATACTCGGGCATCATGCTAATATGTATCC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGCCCTTTTGTTTCCTTaGGAGTGCTTAAAAGGATAC +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGALLFP*ECLKGY
Trigger: GTATCCTTTTAAGCACTCTCAAGGAAACAAAAGGGC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGTAGACACGGCACTGTaGAGGAAGTTTGATTTAGAA +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGVDTAL*RKFDLE
Trigger: TTCTAAATCAAACTTCCTTCACAGTGCCGTGTCTAC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATATCATCAGCTCTGGATaGCCTGCTAAACATGATCAG +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHIISSG*PAKHDQ
Trigger: CTGATCATGTTTAGCAGGGCATCCAGAGCTGATGAT...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTTCAGCTGCTCCATTTaGTGTATGGAGTTAGATCTC +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGFSCSI*CMELDL
Trigger: GAGATCTAACTCCATACAGCAAATGGAGCAGCTGAA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTTCAGCTGCTCCATTTaGTGTATGGAGTTAGATCTC +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLFSCSI*CMELDL
Trigger: GAGATCTAACTCCATACAGCAAATGGAGCAGCTGAA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCCACAAAGAATGCCTTaGCCTGGTGATCATGTTTCA +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHPQRMP*PGDHVS
Trigger: TGAAACATGATCACCAGGGCAAGGCATTCTTTGTGG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAACTGGTTTCTTCAACTaGTGTCAACAGTTTTTCATA +
Preference number: 4 (lower is better)
Translates to: SEHFFTLQYVPLVQECNITGFFN*CQQFFI
Trigger: TATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGT...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCATGATGCCCGAGTATaGATGGAACATGAAAATGGA +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGHDARV*MEHENG
Trigger: TCCATTTTCATGTTCCATGCATACTCGGGCATCATG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTGCATGTTTTTATTATaGAGGGTTACAGATACCTCT +
Preference number: 4 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWCMFLL*RVTDTS
Trigger: AGAGGTATCTGTAACCCTGCATAATAAAAACATGCA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGCTCTCTGCAAGCTCTaGAAGATTTTCTGGCTTATC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHALCKL*KIFWLI
Trigger: GATAAGCCAGAAAATCTTCCAGAGCTTGCAGAGAGC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTTCAGTTCGGATAAATTaGATCTTCTCCCTGAGTGAG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPSVRIN*IFSLSE
Trigger: CTCACTCAGGGAGAAGATCCAATTTATCCGAACTGA...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTAAAAGTTCCTCAGTTTaGCTTCGAAATCCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPKSSSV*LRNPAC
Trigger: ACAAGCGGGATTTCGAAGCCAAACTGAGGAACTTTT...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCCAAATGGAAAAAGTTTaGCAGTCAAGAACTGTTGAT +
Preference number: 4 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFQMEKV*QSRTVD
Trigger: ATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTG...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGGAGCTGATCATGTATaGGTTCATCTTTGTCTTGGA +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLGADHV*VHLCLG
Trigger: TCCAAGACAAAGATGAACCCATACATGATCAGCTCC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTGTAAACCCATAGGCTaGCAAACCATATGTCAATCC +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGCKPIG*QTICQS
Trigger: GGATTGACATATGGTTTGCCAGCCTATGGGTTTACA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTTCTCAAAGAAATGTTTaGGCAATGCCTGTAAACCCA +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTSQRNV*AMPVNP
Trigger: TGGGTTTACAGGCATTGCCCAAACATTTCTTTGAGA...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp GTCCAAAAGTACTGGTTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATGGATCCCAGAAGTTGGCTaGAGAATTCTCATCTCATAT +
Preference number: 4 (lower is better)
Translates to: VQKYWFLQLLSTVFHKAWIPEVG*RILISY
Trigger: ATATGAGATGAGAATTCTCCAGCCAACTTCTGGGAT...CCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGTACTTTTGGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR TCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATCTTTCCTGGCTGAATTaGCATCTTAAGATAAGGGTC +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYLSWLN*HLKIRV
Trigger: GACCCTTATCTTAAGATGTCAATTCAGCCAGGAAAG...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCTCCATTCACAGAATTaGCTCCAAGTATTGTGCCAA +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHLHSQN*LQVLCQ
Trigger: TTGGCACAATACTTGGAGTCAATTCTGTGAATGGAG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCATCTAAGTAATCATTaGGTGAATCCTGACGTCCTC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHHLSNH*VNPDVL
Trigger: GAGGACGTCAGGATTCACTCAATGATTACTTAGATG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATTCTTGCTGGAACTCGTaGTCTTCTTCATCTGAATCA +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYSCWNS*SSSSES
Trigger: TGATTCAGATGAAGAAGATCACGAGTTCCAGCAAGA...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATTCTTGCTGGAACTCGTaGTCTTCTTCATCTGAATCA +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHSCWNS*SSSSES
Trigger: TGATTCAGATGAAGAAGATCACGAGTTCCAGCAAGA...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGGTCACATAGAATTCTaGGAAGAGCCTTATAAAAGG +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGGHIEF*EEPYKR
Trigger: CCTTTTATAAGGCTCTTCTCAGAATTCTATGTGACC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGAAGGAAGCATCCTCTTaGAACTTCCAATGTTCAATC +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLKEASS*NFQCSI
Trigger: GATTGAACATTGGAAGTTTCAAGAGGATGCTTCCTT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGTTTCAAGATTCTCCTaGGTCCCTAAAAATTACCGT +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLVSRFS*VPKNYR
Trigger: ACGGTAATTTTTAGGGACTCAGGAGAATCTTGAAAC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTCTGTGTACTTTTTCCTaGTATGCTGTGATTAATTGC +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTLCTFS*YAVINC
Trigger: GCAATTAATCACAGCATATCAGGAAAAAGTACACAG...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGTAGACACGGCACTGTaGAGGAAGTTTGATTTAGAA +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHVDTAL*RKFDLE
Trigger: TTCTAAATCAAACTTCCTTCACAGTGCCGTGTCTAC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTTGCATCAGTAATAGCTaGTTCAGTTTGAATCACACA +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTCISNS*FSLNHT
Trigger: TGTGTGATTCAAACTGAATCAGCTATTACTGATGCA...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATAACAGCATTTCTTCATaGACAGAAGACGTAACCTCC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHNSISS*TEDVTS
Trigger: GGAGGTTACGTCTTCTGTTCATGAAGAAATGCTGTT...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644030.1
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATTTCTGGAGAGGCATCTaGATGAGAAAACAGCATTTC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHFWRGI*MRKQHF
Trigger: GAAATGCTGTTTTCTCATTCAGATGCCTCTCCAGAA...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644030.1
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGATCCCAGAAGTTGGCTaGAGAATTCTCATCTATATG +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLIPEVG*RILIYM
Trigger: CATATAGATGAGAATTCTCCAGCCAACTTCTGGGAT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTATCCCAGAAGTTGGCTaGAGAATTCTCATCTATATG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPIPEVG*RILIYM
Trigger: CATATAGATGAGAATTCTCCAGCCAACTTCTGGGAT...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATAAAAGTTCCTCAGTTTaGCTTCGAAATCCCGCTTGT +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYKSSSV*LRNPAC
Trigger: ACAAGCGGGATTTCGAAGCCAAACTGAGGAACTTTT...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGCAAGTCCAAAAGTACTaGTTTCTTCAACTGCTGTCA +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLQVQKY*FLQLLS
Trigger: TGACAGCAGTTGAAGAAACCAGTACTTTTGGACTTG...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATGAAAGCCTAGTTATCTaGGTTCACAGTCCAGAAGAA +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYESLVI*VHSPEE
Trigger: TTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTC...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTATTGAATCTCCCAGATaGAAAAAGCTGTTCTCTTCT +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTIESPR*KKLFSS
Trigger: AGAAGAGAACAGCTTTTTCCATCTGGGAGATTCAAT...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGAAGAAAGTGAGAGTTTaGAGGAAGCATCTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLKKVRV*RKHLGN
Trigger: GTTTCCAAGATGCTTCCTCCAAACTCTCACTTTCTT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
3UTR CAA 72 bp TCTTATTGCAAATCTGTAAAGGTACCTCATATTGACTaGGTTTCATTTTCACTCATGTCCCATGAAAGCGGA +
Preference number: 4 (lower is better)
Translates to: SYCKSVKVPHID*VSFSLMSHESG
Trigger: TCCGCTTTCATGGGACATGAGTGAAAATGAAACCAAGTCAATATGAGGTACCTTTACAGATTTGCAATAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTCATCTGAATCAATATaGAGCATGGCATTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLSSESI*SMALSL
Trigger: AAGACTCAATGCCATGCTTCATATTGATTCAGATGA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATAAGGAAGCATCCTCTTaGAACTTCCAATGTTCAATC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHKEASS*NFQCSI
Trigger: GATTGAACATTGGAAGTTTCAAGAGGATGCTTCCTT...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCTGTGTACTTTTTCCTaGTATGCTGTGATTAATTGC +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGLCTFS*YAVINC
Trigger: GCAATTAATCACAGCATATCAGGAAAAAGTACACAG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR TCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATATAGCTGATTCAGTTTaGATCACACAACACGGCTAT +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHIADSV*ITQHGY
Trigger: ATAGCCGTGTTGTGTGATTCAAACTGAATCAGCTAT...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTGCATCAGTAATAGCTaGTTCAGTTTGAATCACACA +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGCISNS*FSLNHT
Trigger: TGTGTGATTCAAACTGAATCAGCTATTACTGATGCA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCAATTCCAGTTCTCTTaGATCAAAAACAGATACCAG +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPQFQFS*IKNRYQ
Trigger: CTGGTATCTGTTTTTGATGCAAGAGAACTGGAATTG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGCACAGACCATCTTATTaGAAATCTGTAAAGGTACCT +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLHRPSY*KSVKVP
Trigger: AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTG...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCACAGACCATCTTATTaGAAATCTGTAAAGGTACCT +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPHRPSY*KSVKVP
Trigger: AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTTACACACATACCACTTaGATATACATTGTCACAGAC +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPYTHTT*IYIVTD
Trigger: GTCTGTGACAATGTATATGCAAGTGGTATGTGTGTA...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTTGCATGTTTTTATTATaGAGGGTTACAGATACCTCT +
Preference number: 4 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTCMFLL*RVTDTS
Trigger: AGAGGTATCTGTAACCCTGCATAATAAAAACATGCA...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTATGTCCCTTCACCTTTaGTACATTCAGTGCAAAATA +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPMSLHL*YIQCKI
Trigger: TATTTTGCACTGAATGTACCAAAGGTGAAGGGACAT...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATAAGAAAGTGAGAGTTTaGAGGAAGCATCTTGGAAAC +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYKKVRV*RKHLGN
Trigger: GTTTCCAAGATGCTTCCTCCAAACTCTCACTTTCTT...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR TCA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATTCATCTGAATCAATATaGAGCATGGCATTGAGTCTT +
Preference number: 4 (lower is better)
Translates to: IRPESLVIWVHSPEENIYSSESI*SMALSL
Trigger: AAGACTCAATGCCATGCTTCATATTGATTCAGATGA...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGACTGGTTTCTTCAACTaGTGTCAACAGTTTTTCATA +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLTGFFN*CQQFFI
Trigger: TATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATTACACACATACCACTTaGATATACATTGTCACAGAC +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHYTHTT*IYIVTD
Trigger: GTCTGTGACAATGTATATGCAAGTGGTATGTGTGTA...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGCATATGTCAATCCAATaGTTTTATGACCCCCAATTT +
Preference number: 4 (lower is better)
Translates to: HNKWKKFGSQELLIERRLHMSIQ*FYDPQF
Trigger: AAATTGGGGGTCATAAAAGCATTGGATTGACATATG...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR GCA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTAATTTAGTCTCCATTTaGAACCTCACTCTTAGGATT +
Preference number: 4 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPNLVSI*NLTLRI
Trigger: AATCCTAAGAGTGAGGTTGCAAATGGAGACTAAATT...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR GCA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGAATTTAGTCTCCATTTaGAACCTCACTCTTAGGATT +
Preference number: 4 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGNLVSI*NLTLRI
Trigger: AATCCTAAGAGTGAGGTTGCAAATGGAGACTAAATT...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATATGTCCCTTCACCTTTaGTACATTCAGTGCAAAATA +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHMSLHL*YIQCKI
Trigger: TATTTTGCACTGAATGTACCAAAGGTGAAGGGACAT...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CCA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATTGTGAATTTTATCACTaGAACTCAGCTATTAGGGCT +
Preference number: 4 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHCEFYH*NSAIRA
Trigger: AGCCCTAATAGCTGAGTTCCAGTGATAAAATTCACA...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS GCA 90 bp TCCAGCCGCGCCGGCGCCCTTCCCGCTAGACGCTTCGGCGGCATCTaGCCGCACCGCCCTGCGGGACGCTGGGCTGGGAGCTGGCGGCAC +
Preference number: 5 (lower is better)
Translates to: SSRAGALPARRFGGI*PHRPAGRWAGSWRH
Trigger: GTGCCGCCAGCTCCCAGCCCAGCGTCCCGCAGGGCGGTGCGGGCAGATGCCGCCGAAGCGTCTAGCGGGAAGGGCGCCGGCGCGGCTGGA
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS CCA 90 bp GGCGGCATCTGCCCGCACCGCCCTGCGGGACGCTGGGCTGGGAGCTaGCGGCACGTCGGGGACCGGTGGAAGGGAGGCGGGGGCAGAGGA +
Preference number: 5 (lower is better)
Translates to: GGICPHRPAGRWAGS*RHVGDRWKGGGGRG
Trigger: TCCTCTGCCCCCGCCTCCCTTCCACCGGTCCCCGACGTGCCGCCAGCTCCCAGCCCAGCGTCCCGCAGGGCGGTGCGGGCAGATGCCGCC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS CCA 90 bp ACGCTTCGGCGGCATCTGCCCGCACCGCCCTGCGGGACGCTGGGCTaGGAGCTGGCGGCACGTCGGGGACCGGTGGAAGGGAGGCGGGGG +
Preference number: 5 (lower is better)
Translates to: TLRRHLPAPPCGTLG*ELAARRGPVEGRRG
Trigger: CCCCCGCCTCCCTTCCACCGGTCCCCGACGTGCCGCCAGCTCCCAGCCCAGCGTCCCGCAGGGCGGTGCGGGCAGATGCCGCCGAAGCGT
78% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS CCA 90 bp GCTAGACGCTTCGGCGGCATCTGCCCGCACCGCCCTGCGGGACGCTaGGCTGGGAGCTGGCGGCACGTCGGGGACCGGTGGAAGGGAGGC +
Preference number: 5 (lower is better)
Translates to: ARRFGGICPHRPAGR*AGSWRHVGDRWKGG
Trigger: GCCTCCCTTCCACCGGTCCCCGACGTGCCGCCAGCTCCCAGCCCAGCGTCCCGCAGGGCGGTGCGGGCAGATGCCGCCGAAGCGTCTAGC
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS-3UTR CAA 90 bp TCAATGCGTGCCTCCCAGTTTGGTGGGAGAGCCTCGTCCACCCTCTGGTACCGGGCTGGAGCCCGGGCATaGGCACGCTGGGTACCTGGC +
Preference number: 5 (lower is better)
Translates to: SMRASQFGGRASSTLWYRAGARA*ARWVPG
Trigger: GCCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAGC...CCGGTACCAGAGGGTGGACGAGGCTCTCCCACCAAACTGGGAGGCACGCATTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS TCA 90 bp CACCATCGCACTCCAGATTGGGCAACAGGCTCAGAGACCCTGTACTaGGACCCTCCAGCCGCGCCGGCGCCCTTCCCGCTAGACGCTTCG +
Preference number: 5 (lower is better)
Translates to: HHRTPDWATGSETLY*DPPAAPAPFPLDAS
Trigger: CGAAGCGTCTAGCGGGAAGGGCGCCGGCGCGGCTGGAGGGTCTCAGTACAGGGTCTCTGAGCCTGTTGCCCAATCTGGAGTGCGATGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427457.2
CDS GCA 90 bp GAGCGGCTCTCAGAAGTCACCAGGTCGGTGTCGCTGTTGGCCCGCTaGAGGGTCATGTTCTCTGGCATGGAGCTCTGGGCGGCAAGGCTC +
Preference number: 5 (lower is better)
Translates to: ERLSEVTRSVSLLAR*RVMFSGMELWAARL
Trigger: GAGCCTTGCCGCCCAGAGCTCCATGCCAGAGAACATGACCCTGCAGCGGGCCAACAGCGACACCGACCTGGTGACTTCTGAGAGCCGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 90 bp CACCAGGTCGGTGTCGCTGTTGGCCCGCTGCAGGGTCATGTTCTCTaGCATGGAGCTCTGGGCGGCAAGGCTCTGGAGGTTCTCTGGGCT +
Preference number: 5 (lower is better)
Translates to: HQVGVAVGPLQGHVL*HGALGGKALEVLWA
Trigger: AGCCCAGAGAACCTCCAGAGCCTTGCCGCCCAGAGCTCCATGCCAGAGAACATGACCCTGCAGCGGGCCAACAGCGACACCGACCTGGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 90 bp GGTCGGTGTCGCTGTTGGCCCGCTGCAGGGTCATGTTCTCTGGCATaGAGCTCTGGGCGGCAAGGCTCTGGAGGTTCTCTGGGCTCAATG +
Preference number: 5 (lower is better)
Translates to: GRCRCWPAAGSCSLA*SSGRQGSGGSLGSM
Trigger: CATTGAGCCCAGAGAACCTCCAGAGCCTTGCCGCCCAGAGCTCCATGCCAGAGAACATGACCCTGCAGCGGGCCAACAGCGACACCGACC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 90 bp TCGCTGTTGGCCCGCTGCAGGGTCATGTTCTCTGGCATGGAGCTCTaGGCGGCAAGGCTCTGGAGGTTCTCTGGGCTCAATGTGTACCGC +
Preference number: 5 (lower is better)
Translates to: SLLARCRVMFSGMEL*AARLWRFSGLNVYR
Trigger: GCGGTACACATTGAGCCCAGAGAACCTCCAGAGCCTTGCCGCCCAGAGCTCCATGCCAGAGAACATGACCCTGCAGCGGGCCAACAGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 90 bp TTAAGCTGGAGCGGCTCTCAGAAGTCACCAGGTCGGTGTCGCTGTTaGCCCGCTGCAGGGTCATGTTCTCTGGCATGGAGCTCTGGGCGG +
Preference number: 5 (lower is better)
Translates to: LSWSGSQKSPGRCRC*PAAGSCSLAWSSGR
Trigger: CCGCCCAGAGCTCCATGCCAGAGAACATGACCCTGCAGCGGGCCAACAGCGACACCGACCTGGTGACTTCTGAGAGCCGCTCCAGCTTAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 90 bp CTTGGTGGGAGAGCCTCGTCCACCCTCTGGTACCGGCTAACATCCTaGCGCACTGAAGGTAGTGATCGCAGTGGCTGGTGGCCGTTGGCT +
Preference number: 5 (lower is better)
Translates to: LGGRASSTLWYRLTS*RTEGSDRSGWWPLA
Trigger: AGCCAACGGCCACCAGCCACTGCGATCACTACCTTCAGTGCGCCAGGATGTTAGCCGGTACCAGAGGGTGGACGAGGCTCTCCCACCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS CCA 90 bp TCTGGGCTTGCCCCAGCGTGTACTCGTACATGCTGGCAGTTAAGCTaGAGCGGCTCTCAGAAGTCACCAGGTCGGTGTCGCTGTTGGCCC +
Preference number: 5 (lower is better)
Translates to: SGLAPACTRTCWQLS*SGSQKSPGRCRCWP
Trigger: GGGCCAACAGCGACACCGACCTGGTGACTTCTGAGAGCCGCTCCAGCTTAACTGCCAGCATGTACGAGTACACGCTGGGGCAAGCCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS-3UTR CAA 90 bp TTGAGAACCTCCAGTAGCGCCCTCCTCCTGGGCAGTTGCCCCTTCACAGGTGCCCTGTGTCTGCGCCACTaGTGGGCTGATCTACCTCTT +
Preference number: 5 (lower is better)
Translates to: LRTSSSALLLGSCPFTGALCLRH*WADLPL
Trigger: AAGAGGTAGATCAGCCCACAAGTGGCGCAGACACAG...GGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGGAGGTTCTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp TCAATGCGTGCCTCCCAGTTTGGTGGGAGAGCCTCGTCCACCCTCTGGTACCGGCCACACAGAATCTTCTaGGGCCGTTACTCCCTCGGA +
Preference number: 5 (lower is better)
Translates to: SMRASQFGGRASSTLWYRPHRIF*GRYSLG
Trigger: TCCGAGGGAGTAACGGCCCAAGAAGATTCTGTGTGG...CCGGTACCAGAGGGTGGACGAGGCTCTCCCACCAAACTGGGAGGCACGCATTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS GCA 90 bp CCGCTTGTAAGGGGCTGGAGCCCGGGCATTGGCACGCTGGGTACCTaGAGCAAACCACAAAGAGAGGACAATCTGGATTTGTGCCTCGTC +
Preference number: 5 (lower is better)
Translates to: PLVRGWSPGIGTLGT*SKPQREDNLDLCLV
Trigger: GACGAGGCACAAATCCAGATTGTCCTCTCTTTGTGGTTTGCTGCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAGCCCCTTACAAGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS CCA 90 bp GCGGCAAGGCTCTGGAGGTTCTCTGGGCTCAATGTGTACCGCATCTaGGGATTTCGACGCCTCACAAAAAGCAGGTGCTCCCGGGCTGAA +
Preference number: 5 (lower is better)
Translates to: AARLWRFSGLNVYRI*GFRRLTKSRCSRAE
Trigger: TTCAGCCCGGGAGCACCTGCTTTTTGTGAGGCGTCGAAATCCCCAGATGCGGTACACATTGAGCCCAGAGAACCTCCAGAGCCTTGCCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS-3UTR CAA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACAGCACTGCCTTCTTCTaGCGGTGGGCTCTCGGCAGC +
Preference number: 5 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDSTAFF*RWALGS
Trigger: GCTGCCGAGAGCCCACCGCAAGAAGAAGGCAGTGCT...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CAGTGGGAAAACTACTCCTCAGTTTCGGAGAGGCACCCATGGACCTCTCAGAGCAGCACTGCCTTCTTCTaGCGGTGGGCTCTCGGCAGC +
Preference number: 5 (lower is better)
Translates to: QWENYSSVSERHPWTSQSSTAFF*RWALGS
Trigger: GCTGCCGAGAGCCCACCGCAAGAAGAAGGCAGTGCT...GCTCTGAGAGGTCCATGGGTGCCTCTCCGAAACTGAGGAGTAGTTTTCCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCCTCCTCCTGGGCAGTaGCCCCTTCACAGGTGCCTT +
Preference number: 5 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDPPPGQ*PLHRCL
Trigger: AAGGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS CCA 90 bp TGCAGGGTCATGTTCTCTGGCATGGAGCTCTGGGCGGCAAGGCTCTaGAGGTTCTCTGGGCTCAATGTGTACCGCATCTGGGGATTTCGA +
Preference number: 5 (lower is better)
Translates to: CRVMFSGMELWAARL*RFSGLNVYRIWGFR
Trigger: TCGAAATCCCCAGATGCGGTACACATTGAGCCCAGAGAACCTCCAGAGCCTTGCCGCCCAGAGCTCCATGCCAGAGAACATGACCCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS TCA 90 bp CATCTGGGGATTTCGACGCCTCACAAAAAGCAGGTGCTCCCGGGCTaGACTAGCCATCCCGTCTGCTTCTCTGGGATTGGCTGCCTACAA +
Preference number: 5 (lower is better)
Translates to: HLGISTPHKKQVLPG*TSHPVCFSGIGCLQ
Trigger: TTGTAGGCAGCCAATCCCAGAGAAGCAGACGGGATGGCTAGTTCAGCCCGGGAGCACCTGCTTTTTGTGAGGCGTCGAAATCCCCAGATG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 90 bp GTTTGGCTTCGAAATCCCGCTTGTAAGGGGCTGGAGCCCGGGCATTaGCACGCTGGGTACCTGCAGCAAACCACAAAGAGAGGACAATCT +
Preference number: 5 (lower is better)
Translates to: VWLRNPACKGLEPGH*HAGYLQQTTKRGQS
Trigger: AGATTGTCCTCTCTTTGTGGTTTGCTGCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAGCCCCTTACAAGCGGGATTTCGAAGCCAAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS-3UTR CAA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCAGCACTGCCTTCTTCTaGCGGTGGGCTCTCGGCAGC +
Preference number: 5 (lower is better)
Translates to: LGCSLGIKLTQILPRGLISTAFF*RWALGS
Trigger: GCTGCCGAGAGCCCACCGCAAGAAGAAGGCAGTGCT...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGCTGGAGCCCGGGCATaGGCACGCTGGGTACCTGGC +
Preference number: 5 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRAGARA*ARWVPG
Trigger: GCCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAGC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGAGAACCTCCAGTAGCGCCCTCCTCCTGGGCAGTTGCCCCTTCACAGGTGCCTCTGTAACTGGGATATaGGCACCCCCTGGCTTTAAT +
Preference number: 5 (lower is better)
Translates to: LRTSSSALLLGSCPFTGASVTGI*APPGFN
Trigger: ATTAAAGCCAGGGGGTGCCAATATCCCAGTTACAGA...GGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGGAGGTTCTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS TCA 90 bp CCAAGTGTCGAAGCCACAAGCAGCCCACAGGCATTTGGCACTCCCTaGGGCATCTCCCTCGTGTTACCTTGCCCTGGTGATCATGTTTCA +
Preference number: 5 (lower is better)
Translates to: PSVEATSSPQAFGTP*GISLVLPCPGDHVS
Trigger: TGAAACATGATCACCAGGGCAAGGTAACACGAGGGAGATGCCTCAGGGAGTGCCAAATGCCTGTGGGCTGCTTGTGGCTTCGACACTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS TCA 90 bp CAGAAGGTGGAATGTTTCACCTCACAAAGAGCCTTGGCCCTCACTTaGAGGGTAGGGCCAAGTGTCGAAGCCACAAGCAGCCCACAGGCA +
Preference number: 5 (lower is better)
Translates to: QKVECFTSQRALALT*RVGPSVEATSSPQA
Trigger: TGCCTGTGGGCTGCTTGTGGCTTCGACACTTGGCCCTACCCTTCAAGTGAGGGCCAAGGCTCTTTGTGAGGTGAAACATTCCACCTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 90 bp AATGTGTACCGCATCTGGGGATTTCGACGCCTCACAAAAAGCAGGTaGTCCCGGGCTGAACTAGCCATCCCGTCTGCTTCTCTGGGATTG +
Preference number: 5 (lower is better)
Translates to: NVYRIWGFRRLTKSR*SRAELAIPSASLGL
Trigger: CAATCCCAGAGAAGCAGACGGGATGGCTAGTTCAGCCCGGGAGCACCTGCTTTTTGTGAGGCGTCGAAATCCCCAGATGCGGTACACATT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 90 bp GTAAAAGTTCCTCAGTTTGGCTTCGAAATCCCGCTTGTAAGGGGCTaGAGCCCGGGCATTGGCACGCTGGGTACCTGCAGCAAACCACAA +
Preference number: 5 (lower is better)
Translates to: VKVPQFGFEIPLVRG*SPGIGTLGTCSKPQ
Trigger: TTGTGGTTTGCTGCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAGCCCCTTACAAGCGGGATTTCGAAGCCAAACTGAGGAACTTTTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS CCA 90 bp ACTTCCTGGCAGAAGGATTTCCTGTTTCAGGCAACCACAGCGACGTaGAGAAACATCCGCCTTGTGGCCACAGCCTATGTTCCACAGGCC +
Preference number: 5 (lower is better)
Translates to: TSWQKDFLFQATTAT*RNIRLVATAYVPQA
Trigger: GGCCTGTGGAACATAGGCTGTGGCCACAAGGCGGATGTTTCTCCACGTCGCTGTGGTTGCCTGAAACAGGAAATCCTTCTGCCAGGAAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS CCA 90 bp TTAACTAACAGGTCCTCACTTGGTGGGAGAGCCTCGTCCACCCTCTaGTACCGGCTAACATCCTGGCGCACTGAAGGTAGTGATCGCAGT +
Preference number: 5 (lower is better)
Translates to: LTNRSSLGGRASSTL*YRLTSWRTEGSDRS
Trigger: ACTGCGATCACTACCTTCAGTGCGCCAGGATGTTAGCCGGTACCAGAGGGTGGACGAGGCTCTCCCACCAAGTGAGGACCTGTTAGTTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS-3UTR CAA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGTCCTGAATGAATGCTaGGGGGTTCCATCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDVLNEC*GVPSAA
Trigger: TGCTGCCGATGGAACCCCCAAGCATTCATTCAGGAC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGTGGTCACACTCTCATaGCAGGAGCTGTCAGCGCAT +
Preference number: 5 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDVVTLS*QELSAH
Trigger: ATGCGCTGACAGCTCCTGCAATGAGAGTGTGACCAC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCCACACAGAATCTTCTaGGGCCGTTACTCCCTCGGA +
Preference number: 5 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDPHRIF*GRYSLG
Trigger: TCCGAGGGAGTAACGGCCCAAGAAGATTCTGTGTGG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGACCCCAGAAGTGGTTaGGGCTCAGGGATTGGGATT +
Preference number: 5 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDDPRSG*GSGIGI
Trigger: AATCCCAATCCCTGAGCCCAAACCACTTCTGGGGTC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS TCA 90 bp ATTTGGCACTCCCTGAGGCATCTCCCTCGTGTTACCTTGCCCTGGTaGTCATGTTTCATTTCCCATCCCCGCGGCAGCTCTAGCTGTTTG +
Preference number: 5 (lower is better)
Translates to: IWHSLRHLPRVTLPW*SCFISHPRGSSSCL
Trigger: CAAACAGCTAGAGCTGCCGCGGGGATGGGAAATGAAACATGATCACCAGGGCAAGGTAACACGAGGGAGATGCCTCAGGGAGTGCCAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 90 bp TCCTGTTTCAGGCAACCACAGCGACGTGGAGAAACATCCGCCTTGTaGCCACAGCCTATGTTCCACAGGCCACTTCTCTGTTCTACTCAC +
Preference number: 5 (lower is better)
Translates to: SCFRQPQRRGETSAL*PQPMFHRPLLCSTH
Trigger: GTGAGTAGAACAGAGAAGTGGCCTGTGGAACATAGGCTGTGGCCACAAGGCGGATGTTTCTCCACGTCGCTGTGGTTGCCTGAAACAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS-3UTR CAA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTTCCCCAGAAAACGCTaGATGATGGGACGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDFPRKR*MMGRLL
Trigger: CAAGAGCCGTCCCATCATCAAGCGTTTTCTGGGGAA...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTTGATCACCGATGGCTaGTCGCTCCAGCAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: LGCSLGIKLTQILPRGLILITDG*SLQQPL
Trigger: CAGAGGCTGCTGGAGCGACAAGCCATCGGTGATCAA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CAA 90 bp TGTGTCTGCGCCACTTGTGGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCGGCCTGGAGTGGCCATaGTGTTCGATAGCATCTAAG +
Preference number: 5 (lower is better)
Translates to: CVCATCGLIYLLRATQFSGLEWP*CSIASK
Trigger: CTTAGATGCTATCGAACACAATGGCCACTCCAGGCC...GCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCCACAAGTGGCGCAGACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACTGGTGGCCGTTGGCTaGAGAACCTCCAGTAGCGCC +
Preference number: 5 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKLVAVG*RTSSSA
Trigger: GGCGCTACTGGAGGTTCTCAAGCCAACGGCCACCAG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCCTCAGGCCTCTCATaGGTCATGGTTCTGCGGATA +
Preference number: 5 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDSSGLS*VMVLRI
Trigger: TATCCGCAGAACCATGACCAATGAGAGGCCTGAGGA...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp GGTCACACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCGTGTCCCTCCGGACTTaGGTGATCATGTGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: GHTLIAGAVSAFQVTLSLVSLRT*VIMCFK
Trigger: TTTGAAGCACATGATCACCAAAGTCCGGAGGGACAC...GAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGTGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGGCAGCTCTAGCTGTTaGTTCGCGAACATGTTGAGG +
Preference number: 5 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDGSSSC*FANMLR
Trigger: CCTCAACATGTTCGCGAACAAACAGCTAGAGCTGCC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGCTGGAGCCCGGGCATaGGCACGCTGGGTACCTGGC +
Preference number: 5 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIAGARA*ARWVPG
Trigger: GCCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAGC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGCTGGAGCCCGGGCATaGGCACGCTGGGTACCTGGC +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWAGARA*ARWVPG
Trigger: GCCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAGC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCGCTGGAGCCCGGGCATaGGCACGCTGGGTACCTGGC +
Preference number: 5 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFAGARA*ARWVPG
Trigger: GCCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAGC...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp TCAATGCGTGCCTCCCAGTTTGGTGGGAGAGCCTCGTCCACCCTCTGGTACCGGATGTCATGGATATCATaGTCTTTCATCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: SMRASQFGGRASSTLWYRMSWIS*SFIHCR
Trigger: CCTGCAGTGGATGAAAGACAATGATATCCATGACAT...CCGGTACCAGAGGGTGGACGAGGCTCTCCCACCAAACTGGGAGGCACGCATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp ACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAGGCCTTTGATTGAAAGACGGTaGGGTTGTTCCCTGGGCATC +
Preference number: 5 (lower is better)
Translates to: TLIAGAVSAFQVTLSLRPLIERR*GCSLGI
Trigger: GATGCCCAGGGAACAACCCAACCGTCTTTCAATCAA...AGGCCTGAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp TCTGGAGAGGCATCCGATGGCTTGTCGCTCCAGCAGCCTCTGGACTGGAATGGTGCTCTAATTTGGAGATaGGGCCAAATGCTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: SGEASDGLSLQQPLDWNGALIWR*GQMLPV
Trigger: AACTGGCAGCATTTGGCCCAATCTCCAAATTAGAGC...ACCATTCCAGTCCAGAGGCTGCTGGAGCGACAAGCCATCGGATGCCTCTCCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS GCA 90 bp TCCACCTCCTCTTTAATGTCCCAGAAGATAATGAGGTTCTGGGCTTaGCCCAGCGTGTACTCGTACATGCTGGCAGTTAAGCTGGAGCGG +
Preference number: 5 (lower is better)
Translates to: STSSLMSQKIMRFWA*PSVYSYMLAVKLER
Trigger: CCGCTCCAGCTTAACTGCCAGCATGTACGAGTACACGCTGGGGCAAGCCCAGAACCTCATTATCTTCTGGGACATTAAAGAGGAGGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 90 bp CTGGGGTCCACCTCCTCTTTAATGTCCCAGAAGATAATGAGGTTCTaGGCTTGCCCCAGCGTGTACTCGTACATGCTGGCAGTTAAGCTG +
Preference number: 5 (lower is better)
Translates to: LGSTSSLMSQKIMRF*ACPSVYSYMLAVKL
Trigger: CAGCTTAACTGCCAGCATGTACGAGTACACGCTGGGGCAAGCCCAGAACCTCATTATCTTCTGGGACATTAAAGAGGAGGTGGACCCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 90 bp TCATTCATAGGAGCAGCCAGAGCTGAACTGAAGTCAAGGCGGGTCTaGAGTTCTAAGGTGGCTGTGAAAGCTCTGCAGGTCCACTTCACG +
Preference number: 5 (lower is better)
Translates to: SFIGAARAELKSRRV*SSKVAVKALQVHFT
Trigger: CGTGAAGTGGACCTGCAGAGCTTTCACAGCCACCTTAGAACTCCAGACCCGCCTTGACTTCAGTTCAGCTCTGGCTGCTCCTATGAATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATAGGTCGGTGTCGCTGTaGGCCCGCTGCAGGGTCATG +
Preference number: 5 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNRSVSL*ARCRVM
Trigger: CATGACCCTGCAGCGGGCCAACAGCGACACCGACCT...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CAA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGAGGTCGGTGTCGCTGTaGGCCCGCTGCAGGGTCATG +
Preference number: 5 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEERSVSL*ARCRVM
Trigger: CATGACCCTGCAGCGGGCCAACAGCGACACCGACCT...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGGGCTGATCTACCTCTaGAGAGCCACACAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIGLIYL*RATQFS
Trigger: GCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCTGTGTCTGCGCCACTaGTGGGCTGATCTACCTCTT +
Preference number: 5 (lower is better)
Translates to: LGCSLGIKLTQILPRGLILCLRH*WADLPL
Trigger: AAGAGGTAGATCAGCCCACAAGTGGCGCAGACACAG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAAGCACTGCCTTCTTCTaGCGGTGGGCTCTCGGCAGC +
Preference number: 5 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRSTAFF*RWALGS
Trigger: GCTGCCGAGAGCCCACCGCAAGAAGAAGGCAGTGCT...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCAGCACTGCCTTCTTCTaGCGGTGGGCTCTCGGCAGC +
Preference number: 5 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCSTAFF*RWALGS
Trigger: GCTGCCGAGAGCCCACCGCAAGAAGAAGGCAGTGCT...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGACCTCCTCCTGGGCAGTaGCCCCTTCACAGGTGCCTT +
Preference number: 5 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRPPPGQ*PLHRCL
Trigger: AAGGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGG...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCTGGTGGCCGTTGGCTaGAGAACCTCCAGTAGCGCC +
Preference number: 5 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVLVAVG*RTSSSA
Trigger: GGCGCTACTGGAGGTTCTCAAGCCAACGGCCACCAG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTGCGTGCCTCCCAGTTaGGTGGGAGAGCCTCGTCCA +
Preference number: 5 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVCVPPS*VGEPRP
Trigger: TGGACGAGGCTCTCCCACCAAACTGGGAGGCACGCA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACGCCCCATCAATAGCATaGGTATTTTCCTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDAPSIA*VFSSGL
Trigger: GAGGCCTGAGGAAAATACCAATGCTATTGATGGGGC...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTTGTTCGCGAACATGTaGAGGAATCCCACAAGGTCG +
Preference number: 5 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDLFANM*RNPTRS
Trigger: CGACCTTGTGGGATTCCTCAACATGTTCGCGAACAA...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTTGCCTTGTCAGGTGTaGCCGATGAACCAGCGCACT +
Preference number: 5 (lower is better)
Translates to: LGCSLGIKLTQILPRGLILPCQV*PMNQRT
Trigger: AGTGCGCTGGTTCATCGGCAACACCTGACAAGGCAA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGAGAACCTCCAGTAGCGCCCTCCTCCTGGGCAGTTGCCCCTTCACAGGTGCCCATCCTGTAAAGTATTaGATGGATGGAAGAGAGTCT +
Preference number: 5 (lower is better)
Translates to: LRTSSSALLLGSCPFTGAHPVKY*MDGRES
Trigger: AGACTCTCTTCCATCCATCAAATACTTTACAGGATG...GGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGGGCGCTACTGGAGGTTCTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS CCA 90 bp CGTAACCTCCACTTTAAACTGGAGGTACCCACTCACGTGGTCAGCTaGGAGCCTTCTGCCAAGGTTGTAGCTGAGCATTTGATCACCGAT +
Preference number: 5 (lower is better)
Translates to: RNLHFKLEVPTHVVS*EPSAKVVAEHLITD
Trigger: ATCGGTGATCAAATGCTCAGCTACAACCTTGGCAGAAGGCTCCCAGCTGACCACGTGAGTGGGTACCTCCAGTTTAAAGTGGAGGTTACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS-3UTR CAA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTGGGTAACCCAGGTCTaGCTGGAACTCGTGATCTTC +
Preference number: 5 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIWVTQV*LELVIF
Trigger: GAAGATCACGAGTTCCAGCAAGACCTGGGTTACCCA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATCCTCCTCCTGGGCAGTaGCCCCTTCACAGGTGCCTT +
Preference number: 5 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNPPPGQ*PLHRCL
Trigger: AAGGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGG...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATCTGGTGGCCGTTGGCTaGAGAACCTCCAGTAGCGCC +
Preference number: 5 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNLVAVG*RTSSSA
Trigger: GGCGCTACTGGAGGTTCTCAAGCCAACGGCCACCAG...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTGCGTGCCTCCCAGTTaGGTGGGAGAGCCTCGTCCA +
Preference number: 5 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNCVPPS*VGEPRP
Trigger: TGGACGAGGCTCTCCCACCAAACTGGGAGGCACGCA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp GGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCACTGCCCTGGTCAGCACTGTTCAGCTGCTCCATTaGCTGTATGGAGTTAGATCT +
Preference number: 5 (lower is better)
Translates to: GLIYLLRATQFSTALVSTVQLLH*LYGVRS
Trigger: AGATCTAACTCCATACAGCAAATGGAGCAGCTGAAC...AGTGCTGACCAGGGCAGTGCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTCCTCAGGCCTCTCATaGGTCATGGTTCTGCGGATA +
Preference number: 5 (lower is better)
Translates to: LGCSLGIKLTQILPRGLISSGLS*VMVLRI
Trigger: TATCCGCAGAACCATGACCAATGAGAGGCCTGAGGA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp GCTGGGCCTGCAGGTAAGGAGCTCTCTGCAAGCTCTGGAAGATTTTCTGGCTTATTGTTCGCGAACATGTaGAGGAATCCCACAAGGTCG +
Preference number: 5 (lower is better)
Translates to: AGPAGKELSASSGRFSGLLFANM*RNPTRS
Trigger: CGACCTTGTGGGATTCCTCAACATGTTCGCGAACAA...TAAGCCAGAAAATCTTCCAGAGCTTGCAGAGAGCTCCTTACCTGCAGGCCCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp GGTCACACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAGTCGTTGTTCATTGTaGAATCTTTCCACTGCAGCC +
Preference number: 5 (lower is better)
Translates to: GHTLIAGAVSAFQVTLSLSRCSL*NLSTAA
Trigger: GGCTGCAGTGGAAAGATTCAACAATGAACAACGACT...GAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGTGTGACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp ACCTGTACCACAGGTAAAGAACCAGCAGTGCACACGGATTCCTGCGACCCTTCGGGCAGTCAAGAACTGTaGATTGAAAGACGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: TCTTGKEPAVHTDSCDPSGSQEL*IERRLG
Trigger: ACCCAACCGTCTTTCAATCAACAGTTCTTGACTGCC...CGAAGGGTCGCAGGAATCCGTGTGCACTGCTGGTTCTTTACCTGTGGTACAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGACTACAAAGCTGGGCTTaGCGCCCGTCGCCACAAGCT +
Preference number: 5 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRLQSWA*RPSPQA
Trigger: AGCTTGTGGCGACGGGCGCAAAGCCCAGCTTTGTAG...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644030.1
CDS GCA 90 bp CCTATTAGCTGCCTATTCATAAGACAGGAGACAGGACTCCTAACATaGAGCCCAAAGCAGAGTAGCCAAACAGAGACCGAGCACCAGCCT +
Preference number: 5 (lower is better)
Translates to: PISCLFIRQETGLLT*SPKQSSQTETEHQP
Trigger: AGGCTGGTGCTCGGTCTCTGTTTGGCTACTCTGCTTTGGGCTGCATGTTAGGAGTCCTGTCTCCTGTCTTATGAATAGGCAGCTAATAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 90 bp TGGGAGGACTGCTTGAGCCCAGGAGTTCTGGACTACAGTGTGCTATaGCAATCAGGTGTCCACACTAAGTTCCCCAACAATATGGTGAAC +
Preference number: 5 (lower is better)
Translates to: WEDCLSPGVLDYSVL*QSGVHTKFPNNMVN
Trigger: GTTCACCATATTGTTGGGGAACTTAGTGTGGACACCTGATTGGCATAGCACACTGTAGTCCAGAACTCCTGGGCTCAAGCAGTCCTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 90 bp TTGGTTACTCAATACTTGCAGAGCATAATGTCATGGTTAAGAGCATaGTTCCTGGAACCAGCCTGGCTGGCCTACAGCGTGGCTCAGCCA +
Preference number: 5 (lower is better)
Translates to: LVTQYLQSIMSWLRA*FLEPAWLAYSVAQP
Trigger: TGGCTGAGCCACGCTGTAGGCCAGCCAGGCTGGTTCCAGGAACCATGCTCTTAACCATGACATTATGCTCTGCAAGTATTGAGTAACCAA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS-3UTR CAA 90 bp CACTGGGCACCTGTACCACAGGTAAAGAACCAGCAGTGCACACGGATTCCTGCGTTAGAATCCCAGAAGTaGGCTGGAGAATTCTCATCT +
Preference number: 5 (lower is better)
Translates to: HWAPVPQVKNQQCTRIPALESQK*AGEFSS
Trigger: AGATGAGAATTCTCCAGCCAACTTCTGGGATTCTAA...CGCAGGAATCCGTGTGCACTGCTGGTTCTTTACCTGTGGTACAGGTGCCCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp AACCATGTCCTGGTACTGTGGCCTACTGACTGTATTGAATGTACTGGATGGCCTGTCCTGAATGAATGCTaGGGGGTTCCATCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: NHVLVLWPTDCIECTGWPVLNEC*GVPSAA
Trigger: TGCTGCCGATGGAACCCCCAAGCATTCATTCAGGAC...AGGCCATCCAGTACATTCAATACAGTCAGTAGGCCACAGTACCAGGACATGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp GGCAGATCCAGACGGTTAAAACATGTATGCGCTCTGGGAAGAGCAGTGATTTTCGGGCTGATCTACCTCTaGAGAGCCACACAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: GRSRRLKHVCALGRAVIFGLIYL*RATQFS
Trigger: GCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCC...GAAAATCACTGCTCTTCCCAGAGCGCATACATGTTTTAACCGTCTGGATCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAGTGGTCACACTCTCATaGCAGGAGCTGTCAGCGCAT +
Preference number: 5 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKVVTLS*QELSAH
Trigger: ATGCGCTGACAGCTCCTGCAATGAGAGTGTGACCAC...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAAGCACTGCCTTCTTCTaGCGGTGGGCTCTCGGCAGC +
Preference number: 5 (lower is better)
Translates to: SEHFFTLQYVPLVQECNISTAFF*RWALGS
Trigger: GCTGCCGAGAGCCCACCGCAAGAAGAAGGCAGTGCT...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACCTCCTCCTGGGCAGTaGCCCCTTCACAGGTGCCTT +
Preference number: 5 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIPPPGQ*PLHRCL
Trigger: AAGGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCTGGTGGCCGTTGGCTaGAGAACCTCCAGTAGCGCC +
Preference number: 5 (lower is better)
Translates to: THRLANHMSIQCFYDPQFLVAVG*RTSSSA
Trigger: GGCGCTACTGGAGGTTCTCAAGCCAACGGCCACCAG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTGCGTGCCTCCCAGTTaGGTGGGAGAGCCTCGTCCA +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWCVPPS*VGEPRP
Trigger: TGGACGAGGCTCTCCCACCAAACTGGGAGGCACGCA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATGCGTGCCTCCCAGTTaGGTGGGAGAGCCTCGTCCA +
Preference number: 5 (lower is better)
Translates to: SEHFFTLQYVPLVQECNICVPPS*VGEPRP
Trigger: TGGACGAGGCTCTCCCACCAAACTGGGAGGCACGCA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGAAATCTGCACTGGCTaGGTGAAAGTCAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIEICTG*VKVSFL
Trigger: GAGGAAGCTGACTTTCACCAAGCCAGTGCAGATTTC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACTTGCCTTGTCAGGTGTaGCCGATGAACCAGCGCACT +
Preference number: 5 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHLPCQV*PMNQRT
Trigger: AGTGCGCTGGTTCATCGGCAACACCTGACAAGGCAA...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp AGAATTGACTCCAAGTATTGTGCCAACAGCTTCTGGAGAGGCATCCGATGGCTTTTGCCTTGTCAGGTGTaGCCGATGAACCAGCGCACT +
Preference number: 5 (lower is better)
Translates to: RIDSKYCANSFWRGIRWLLPCQV*PMNQRT
Trigger: AGTGCGCTGGTTCATCGGCAACACCTGACAAGGCAA...AAGCCATCGGATGCCTCTCCAGAAGCTGTTGGCACAATACTTGGAGTCAATTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAATGTGGCTGCGTTGCCTaGTCAGGTGTTGCCGATGAA +
Preference number: 5 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKCGCVA*SGVADE
Trigger: TTCATCGGCAACACCTGACAAGGCAACGCAGCCACA...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp GGCAGATCCAGACGGTTAAAACATGTATGCGCTCTGGGAAGAGCAGTGATTTTCCAAGGTCTGCATCGCTaGAAAGGCGCACCAATCCTG +
Preference number: 5 (lower is better)
Translates to: GRSRRLKHVCALGRAVIFQGLHR*KGAPIL
Trigger: CAGGATTGGTGCGCCTTTCAAGCGATGCAGACCTTG...GAAAATCACTGCTCTTCCCAGAGCGCATACATGTTTTAACCGTCTGGATCTGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACCACACAGAATCTTCTaGGGCCGTTACTCCCTCGGA +
Preference number: 5 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKPHRIF*GRYSLG
Trigger: TCCGAGGGAGTAACGGCCCAAGAAGATTCTGTGTGG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACAATGTGACAGAGCACTaGTTCCTGGAAAACAACAGC +
Preference number: 5 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDNVTEH*FLENNS
Trigger: GCTGTTGTTTTCCAGGAACAAGTGCTCTGTCACATT...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTTGATTGAAAGACGGTaGGGTTGTTCCCTGGGCATC +
Preference number: 5 (lower is better)
Translates to: LGCSLGIKLTQILPRGLILIERR*GCSLGI
Trigger: GATGCCCAGGGAACAACCCAACCGTCTTTCAATCAA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACATTAGCATTATATTCTaGCGGGGTGGCACAACTGCT +
Preference number: 5 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDISIIF*RGGTTA
Trigger: AGCAGTTGTGCCACCCCGCAAGAATATAATGCTAAT...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS TCA 90 bp TCCCACAGCATCCTGCCAAGCCCTTGCTATCTTCATGATAATTGCTaGAGATATCCCTTCACCCTCCTTACTGGTGAGAGGCAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: SHSILPSPCYLHDNC*RYPFTLLTGERQEK
Trigger: CTTCTCCTGCCTCTCACCAGTAAGGAGGGTGAAGGGATATCTTCAGCAATTATCATGAAGATAGCAAGGGCTTGGCAGGATGCTGTGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 90 bp GTGGTCACAAACAACCTGCTGTCCAGGTTTCACTTGAACAGAAGGTaGAATGTTTCACCTCACAAAGAGCCTTGGCCCTCACTTGAAGGG +
Preference number: 5 (lower is better)
Translates to: VVTNNLLSRFHLNRR*NVSPHKEPWPSLEG
Trigger: CCCTTCAAGTGAGGGCCAAGGCTCTTTGTGAGGTGAAACATTCCACCTTCTGTTCAAGTGAAACCTGGACAGCAGGTTGTTTGTGACCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 90 bp CAGAGGAACCAAAGCATCAGCCTGTTGTCATGGTCACATATAAGATaGGTAAGTGGAGGGGGTGAGCAAGAAGGGAAAGCGGTAAGGCAA +
Preference number: 5 (lower is better)
Translates to: QRNQSISLLSWSHIR*VSGGGEQEGKAVRQ
Trigger: TTGCCTTACCGCTTTCCCTTCTTGCTCACCCCCTCCACTTACCCATCTTATATGTGACCATGACAACAGGCTGATGCTTTGGTTCCTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS-3UTR CAA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAATCTGCTTCTCTGGGATaGGCTGCCTACAAAGCTCTG +
Preference number: 5 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKSASLG*AAYKAL
Trigger: CAGAGCTTTGTAGGCAGCCAATCCCAGAGAAGCAGA...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260983.8
CDS-3UTR CAA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAATTCCCCAGAAAACGCTaGATGATGGGACGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKFPRKR*MMGRLL
Trigger: CAAGAGCCGTCCCATCATCAAGCGTTTTCTGGGGAA...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGTCCTGAATGAATGCTaGGGGGTTCCATCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVVLNEC*GVPSAA
Trigger: TGCTGCCGATGGAACCCCCAAGCATTCATTCAGGAC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAGGCCTGGAGTGGCCATaGTGTTCGATAGCATCTAAG +
Preference number: 5 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKGLEWP*CSIASK
Trigger: CTTAGATGCTATCGAACACAATGGCCACTCCAGGCC...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGGGCTGATCTACCTCTaGAGAGCCACACAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVGLIYL*RATQFS
Trigger: GCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCGTGGTCACACTCTCATaGCAGGAGCTGTCAGCGCAT +
Preference number: 5 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCVVTLS*QELSAH
Trigger: ATGCGCTGACAGCTCCTGCAATGAGAGTGTGACCAC...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAGATGAACCAGCGCACTaGTGGGTCTACTGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKDEPAH*WVYCSE
Trigger: TTCAGAGCAGTAGACCCACAAGTGCGCTGGTTCATC...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTTGCCTTGTCAGGTGTaGCCGATGAACCAGCGCACT +
Preference number: 5 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVLPCQV*PMNQRT
Trigger: AGTGCGCTGGTTCATCGGCAACACCTGACAAGGCAA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATGTGGCTGCGTTGCCTaGTCAGGTGTTGCCGATGAA +
Preference number: 5 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRCGCVA*SGVADE
Trigger: TTCATCGGCAACACCTGACAAGGCAACGCAGCCACA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGCTGGAGCCCGGGCATaGGCACGCTGGGTACCTGGC +
Preference number: 5 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHAGARA*ARWVPG
Trigger: GCCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAGC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp ACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAGGCCTCCAATTCCAGTTCTCTaGCATCAAAAACAGATACCA +
Preference number: 5 (lower is better)
Translates to: TLIAGAVSAFQVTLSLRPPIPVL*HQKQIP
Trigger: TGGTATCTGTTTTTGATGCAAGAGAACTGGAATTGG...AGGCCTGAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp ACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAGGCCTCCTCTATATTCTGTGTaGTTTCTCCAATCACTTAGG +
Preference number: 5 (lower is better)
Translates to: TLIAGAVSAFQVTLSLRPPLYSV*FLQSLR
Trigger: CCTAAGTGATTGGAGAAACAACACAGAATATAGAGG...AGGCCTGAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGACCACACAGAATCTTCTaGGGCCGTTACTCCCTCGGA +
Preference number: 5 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRPHRIF*GRYSLG
Trigger: TCCGAGGGAGTAACGGCCCAAGAAGATTCTGTGTGG...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCGGCAGTCAAGAACTGTaGATTGAAAGACGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIGSQEL*IERRLG
Trigger: ACCCAACCGTCTTTCAATCAACAGTTCTTGACTGCC...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp GGGCTGATCTACCTCTTGAGAGCCACACAGTTCAGCACTGCCCTGGTCAGCACTTTAACTTGCTCTAATTaGGAGATTGGGCCAAATGCT +
Preference number: 5 (lower is better)
Translates to: GLIYLLRATQFSTALVSTLTCSN*EIGPNA
Trigger: AGCATTTGGCCCAATCTCCAAATTAGAGCAAGTTAA...AGTGCTGACCAGGGCAGTGCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp GGTCACACTCTCATTGCAGGAGCTGTCAGCGCATTCCAGGTCACTCTCTCCCTCAATGTCCCTTCACCTTaGGTACATTCAGTGCAAAAT +
Preference number: 5 (lower is better)
Translates to: GHTLIAGAVSAFQVTLSLNVPSP*VHSVQN
Trigger: ATTTTGCACTGAATGTACCAAAGGTGAAGGGACATT...GAGGGAGAGAGTGACCTGGAATGCGCTGACAGCTCCTGCAATGAGAGTGTGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTTCTGCTTCTCTGGGATaGGCTGCCTACAAAGCTGGG +
Preference number: 5 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVSASLG*AAYKAG
Trigger: CCCAGCTTTGTAGGCAGCCAATCCCAGAGAAGCAGA...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644030.1
CDS-3UTR CAA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTAGGTCGGTGTCGCTGTaGGCCCGCTGCAGGGTCATG +
Preference number: 5 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPRSVSL*ARCRVM
Trigger: CATGACCCTGCAGCGGGCCAACAGCGACACCGACCT...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CAA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGAGGTCGGTGTCGCTGTaGGCCCGCTGCAGGGTCATG +
Preference number: 5 (lower is better)
Translates to: HNKWKKFGSQELLIERRLRSVSL*ARCRVM
Trigger: CATGACCCTGCAGCGGGCCAACAGCGACACCGACCT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CAA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATAATGAGGTTCTGGGCTaGCCCCAGCGTGTACTCGTA +
Preference number: 5 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNNEVLG*PQRVLV
Trigger: TACGAGTACACGCTGGGGCAAGCCCAGAACCTCATT...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CAA 90 bp CAGTGGGAAAACTACTCCTCAGTTTCGGAGAGGCACCCATGGACCTCTCAGAGCATGATGGGACGGCTCTaGGCAAATTTGTCTTTAATT +
Preference number: 5 (lower is better)
Translates to: QWENYSSVSERHPWTSQSMMGRL*ANLSLI
Trigger: AATTAAAGACAAATTTGCCAAGAGCCGTCCCATCAT...GCTCTGAGAGGTCCATGGGTGCCTCTCCGAAACTGAGGAGTAGTTTTCCCACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATTGATCACCGATGGCTaGTCGCTCCAGCAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: SEHFFTLQYVPLVQECNILITDG*SLQQPL
Trigger: CAGAGGCTGCTGGAGCGACAAGCCATCGGTGATCAA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CAA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACGTTGTAGCTGAGCATTaGATCACCGATGGCTTGTCG +
Preference number: 5 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHVVAEH*ITDGLS
Trigger: CGACAAGCCATCGGTGATCAAATGCTCAGCTACAAC...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGGGGCTGATCTACCTCTaGAGAGCCACACAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEGLIYL*RATQFS
Trigger: GCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCC...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGGGCTGATCTACCTCTaGAGAGCCACACAGTTCAGC +
Preference number: 5 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNGLIYL*RATQFS
Trigger: GCTGAACTGTGTGGCTCTCAAGAGGTAGATCAGCCC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGGCAGCTCTAGCTGTTaGTTCGCGAACATGTTGAGG +
Preference number: 5 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRGSSSC*FANMLR
Trigger: CCTCAACATGTTCGCGAACAAACAGCTAGAGCTGCC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGGCAGCTCTAGCTGTTaGTTCGCGAACATGTTGAGG +
Preference number: 5 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVGSSSC*FANMLR
Trigger: CCTCAACATGTTCGCGAACAAACAGCTAGAGCTGCC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGATGAACCAGCGCACTaGTGGGTCTACTGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRDEPAH*WVYCSE
Trigger: TTCAGAGCAGTAGACCCACAAGTGCGCTGGTTCATC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTGTGGCTGCGTTGCCTaGTCAGGTGTTGCCGATGAA +
Preference number: 5 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNCGCVA*SGVADE
Trigger: TTCATCGGCAACACCTGACAAGGCAACGCAGCCACA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGCAAGGTCTGCATCGCTaGAAAGGCGCACCAATCCTG +
Preference number: 5 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEQGLHR*KGAPIL
Trigger: CAGGATTGGTGCGCCTTTCAAGCGATGCAGACCTTG...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp GACGGTTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACCCTCTATATTCTGTGTaGTTTCTCCAATCACTTAGG +
Preference number: 5 (lower is better)
Translates to: DGWVVPWASSSPKSFQEDPLYSV*FLQSLR
Trigger: CCTAAGTGATTGGAGAAACAACACAGAATATAGAGG...GTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAACCGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCAGTCGTTGTTCATTGTaGAATCTTTCCACTGCAGCC +
Preference number: 5 (lower is better)
Translates to: LGCSLGIKLTQILPRGLISRCSL*NLSTAA
Trigger: GGCTGCAGTGGAAAGATTCAACAATGAACAACGACT...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGCCACACAGAATCTTCTaGGGCCGTTACTCCCTCGGA +
Preference number: 5 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEPHRIF*GRYSLG
Trigger: TCCGAGGGAGTAACGGCCCAAGAAGATTCTGTGTGG...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACTTGATTGAAAGACGGTaGGGTTGTTCCCTGGGCATC +
Preference number: 5 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHLIERR*GCSLGI
Trigger: GATGCCCAGGGAACAACCCAACCGTCTTTCAATCAA...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS TCA 90 bp TGTCCTCGTCATCGGAAGGGCTACCTAAGTCTCCATTCACAGAATTaGCTCCAAGTATTGTGCCAACAGCTTCTGGAGAGGCATCTTCAT +
Preference number: 5 (lower is better)
Translates to: CPRHRKGYLSLHSQN*LQVLCQQLLERHLH
Trigger: ATGAAGATGCCTCTCCAGAAGCTGTTGGCACAATACTTGGAGTCAATTCTGTGAATGGAGACTTAGGTAGCCCTTCCGATGACGAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS TCA 90 bp AGTCACTGTTTGTGGTCACAAACAACCTGCTGTCCAGGTTTCACTTaGACAGAAGGTGGAATGTTTCACCTCACAAAGAGCCTTGGCCCT +
Preference number: 5 (lower is better)
Translates to: SHCLWSQTTCCPGFT*TEGGMFHLTKSLGP
Trigger: AGGGCCAAGGCTCTTTGTGAGGTGAAACATTCCACCTTCTGTTCAAGTGAAACCTGGACAGCAGGTTGTTTGTGACCACAAACAGTGACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS TCA 90 bp GTGGATAAAAATAGCACCCATCTCCAGGCTGCTGTGAGCACTAAATaGACTAGTGTCTGGCCCAGGGGCAATGCTACATACTCCAGAATA +
Preference number: 5 (lower is better)
Translates to: VDKNSTHLQAAVSTK*TSVWPRGNATYSRI
Trigger: TATTCTGGAGTATGTAGCATTGCCCCTGGGCCAGACACTAGTTCATTTAGTGCTCACAGCAGCCTGGAGATGGGTGCTATTTTTATCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS TCA 90 bp AGGTGTAAGGCAGGAGCAAACAGCCCAGGTCAGACTACCCTGCAGTaGTCAAGAACAACATGGACAGCAAAGAACTGTAACACCAAAAAG +
Preference number: 5 (lower is better)
Translates to: RCKAGANSPGQTTLQ*SRTTWTAKNCNTKK
Trigger: CTTTTTGGTGTTACAGTTCTTTGCTGTCCATGTTGTTCTTGATCACTGCAGGGTAGTCTGACCTGGGCTGTTTGCTCCTGCCTTACACCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS TCA 90 bp TGTCCTCGTCATCGGAAGGGCTACCTAAGTCTCCATTCACAGAATTaGCTCCAAGTATTGTGCCAACAGCTTCTGGAGAGGCATCTGAAT +
Preference number: 5 (lower is better)
Translates to: CPRHRKGYLSLHSQN*LQVLCQQLLERHLN
Trigger: ATTCAGATGCCTCTCCAGAAGCTGTTGGCACAATACTTGGAGTCAATTCTGTGAATGGAGACTTAGGTAGCCCTTCCGATGACGAGGACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644030.1
CDS GCA 90 bp TATACAGGTGTAAGGCAGGAGCAAACAGCCCAGGTCAGACTACCCTaGAGTGATCAAGAACAACATGGACAGCAAAGAACTGTAACACCA +
Preference number: 5 (lower is better)
Translates to: YTGVRQEQTAQVRLP*SDQEQHGQQRTVTP
Trigger: TGGTGTTACAGTTCTTTGCTGTCCATGTTGTTCTTGATCACTGCAGGGTAGTCTGACCTGGGCTGTTTGCTCCTGCCTTACACCTGTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 90 bp CAGCAGCAAGAAGAAACATGGCATTCTTCCTTAAAATCATACACCTaGCCAACCCACGTGGCAGTTTCATTCATAGGAGCAGCCAGAGCT +
Preference number: 5 (lower is better)
Translates to: QQQEETWHSSLKSYT*PTHVAVSFIGAARA
Trigger: AGCTCTGGCTGCTCCTATGAATGAAACTGCCACGTGGGTTGGCCAGGTGTATGATTTTAAGGAAGAATGCCATGTTTCTTCTTGCTGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000642531.1
ENST00000647236.1
CDS-3UTR CAA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGTTCCCCAGAAAACGCTaGATGATGGGACGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEFPRKR*MMGRLL
Trigger: CAAGAGCCGTCCCATCATCAAGCGTTTTCTGGGGAA...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGTCCTGAATGAATGCTaGGGGGTTCCATCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIVLNEC*GVPSAA
Trigger: TGCTGCCGATGGAACCCCCAAGCATTCATTCAGGAC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGTCCTGAATGAATGCTaGGGGGTTCCATCGGCAGCA +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWVLNEC*GVPSAA
Trigger: TGCTGCCGATGGAACCCCCAAGCATTCATTCAGGAC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGGCCTGGAGTGGCCATaGTGTTCGATAGCATCTAAG +
Preference number: 5 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNGLEWP*CSIASK
Trigger: CTTAGATGCTATCGAACACAATGGCCACTCCAGGCC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGTGGGTAACCCAGGTCTaGCTGGAACTCGTGATCTTC +
Preference number: 5 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEWVTQV*LELVIF
Trigger: GAAGATCACGAGTTCCAGCAAGACCTGGGTTACCCA...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACTGTGTCTGCGCCACTaGTGGGCTGATCTACCTCTT +
Preference number: 5 (lower is better)
Translates to: SEHFFTLQYVPLVQECNILCLRH*WADLPL
Trigger: AAGAGGTAGATCAGCCCACAAGTGGCGCAGACACAG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGTGGTCACACTCTCATaGCAGGAGCTGTCAGCGCAT +
Preference number: 5 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIVVTLS*QELSAH
Trigger: ATGCGCTGACAGCTCCTGCAATGAGAGTGTGACCAC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGTGGTCACACTCTCATaGCAGGAGCTGTCAGCGCAT +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWVVTLS*QELSAH
Trigger: ATGCGCTGACAGCTCCTGCAATGAGAGTGTGACCAC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCCTCCTCCTGGGCAGTaGCCCCTTCACAGGTGCCTT +
Preference number: 5 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGPPPGQ*PLHRCL
Trigger: AAGGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATTCCTCAGGCCTCTCATaGGTCATGGTTCTGCGGATA +
Preference number: 5 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNSSGLS*VMVLRI
Trigger: TATCCGCAGAACCATGACCAATGAGAGGCCTGAGGA...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGCCCCATCAATAGCATaGGTATTTTCCTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVAPSIA*VFSSGL
Trigger: GAGGCCTGAGGAAAATACCAATGCTATTGATGGGGC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGGTGTCCCTCCGGACTTaGGTGATCATGTGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLVSLRT*VIMCFK
Trigger: TTTGAAGCACATGATCACCAAAGTCCGGAGGGACAC...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGTGTCCCTCCGGACTTaGGTGATCATGTGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVVSLRT*VIMCFK
Trigger: TTTGAAGCACATGATCACCAAAGTCCGGAGGGACAC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATTGTTCGCGAACATGTaGAGGAATCCCACAAGGTCG +
Preference number: 5 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRLFANM*RNPTRS
Trigger: CGACCTTGTGGGATTCCTCAACATGTTCGCGAACAA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTTGCCTTGTCAGGTGTaGCCGATGAACCAGCGCACT +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWLPCQV*PMNQRT
Trigger: AGTGCGCTGGTTCATCGGCAACACCTGACAAGGCAA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATGTGGCTGCGTTGCCTaGTCAGGTGTTGCCGATGAA +
Preference number: 5 (lower is better)
Translates to: SEHFFTLQYVPLVQECNICGCVA*SGVADE
Trigger: TTCATCGGCAACACCTGACAAGGCAACGCAGCCACA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGGCCTACTGACTGTATaGAATGTACTGGATGGCCTG +
Preference number: 5 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRGLLTV*NVLDGL
Trigger: CAGGCCATCCAGTACATTCAATACAGTCAGTAGGCC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCGGCCTACTGACTGTATaGAATGTACTGGATGGCCTG +
Preference number: 5 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCGLLTV*NVLDGL
Trigger: CAGGCCATCCAGTACATTCAATACAGTCAGTAGGCC...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACAAGGTCTGCATCGCTaGAAAGGCGCACCAATCCTG +
Preference number: 5 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIQGLHR*KGAPIL
Trigger: CAGGATTGGTGCGCCTTTCAAGCGATGCAGACCTTG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCAAGGTCTGCATCGCTaGAAAGGCGCACCAATCCTG +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWQGLHR*KGAPIL
Trigger: CAGGATTGGTGCGCCTTTCAAGCGATGCAGACCTTG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACTCTGTAACTGGGATATaGGCACCCCCTGGCTTTAAT +
Preference number: 5 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHSVTGI*APPGFN
Trigger: ATTAAAGCCAGGGGGTGCCAATATCCCAGTTACAGA...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp GCTGGGCCTGCAGGTAAGGAGCTCTCTGCAAGCTCTGGAAGATTTTCTGGCTTACTTAGTCGTTGTTCATaGTTGAATCTTTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: AGPAGKELSASSGRFSGLLSRCS*LNLSTA
Trigger: TGCAGTGGAAAGATTCAACAATGAACAACGACTAAG...TAAGCCAGAAAATCTTCCAGAGCTTGCAGAGAGCTCCTTACCTGCAGGCCCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACGGCAGTCAAGAACTGTaGATTGAAAGACGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHGSQEL*IERRLG
Trigger: ACCCAACCGTCTTTCAATCAACAGTTCTTGACTGCC...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS TCA 90 bp CTTCCATCCAATGGAATATTTACAGGCACTGGGCTCTCAGGCTGTTaGACCAAATATAGTACCAGCAAAGCCATATCTTCCCCTGGTGTC +
Preference number: 5 (lower is better)
Translates to: LPSNGIFTGTGLSGC*TKYSTSKAISSPGV
Trigger: GACACCAGGGGAAGATATGGCTTTGCTGGTACTATATTTGGTTCAACAGCCTGAGAGCCCAGTGCCTGTAAATATTCCATTGGATGGAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS TCA 90 bp TTTCACCCCAAACAGGATTCTAATGTAAAAGCCAGCAGCAGATTGTaGGGTCAGCTCTCTACCAGCCTACACTCAGGGTTCTCTACAATG +
Preference number: 5 (lower is better)
Translates to: FHPKQDSNVKASSRL*GQLSTSLHSGFSTM
Trigger: CATTGTAGAGAACCCTGAGTGTAGGCTGGTAGAGAGCTGACCTCACAATCTGCTGCTGGCTTTTACATTAGAATCCTGTTTGGGGTGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS TCA 90 bp AGACAGGATTCCGGCAGGTCTCTAACAAGAGGCTCCTGTCCAGTATaGATGACACTAAAAGCCACTCCTGCCTTTCATCAAGACTTATCA +
Preference number: 5 (lower is better)
Translates to: RQDSGRSLTRGSCPV*MTLKATPAFHQDLS
Trigger: TGATAAGTCTTGATGAAAGGCAGGAGTGGCTTTTAGTGTCATTCATACTGGACAGGAGCCTCTTGTTAGAGACCTGCCGGAATCCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS GCA 90 bp CTGGGTACCTGCAGCAAACCACAAAGAGAGGACAATCTGGATTTGTaGCTCGTCCTTATGTTCATCACATCACCATGGACAAAAGCTATC +
Preference number: 5 (lower is better)
Translates to: LGTCSKPQREDNLDL*LVLMFITSPWTKAI
Trigger: GATAGCTTTTGTCCATGGTGATGTGATGAACATAAGGACGAGGCACAAATCCAGATTGTCCTCTCTTTGTGGTTTGCTGCAGGTACCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS GCA 90 bp TGCATGACAGAGAGAGATCAGGCTAAAGTGATAAGCTTTTGGGTCTaGCTGTTAATCTGTCTTGTCCACAAGGCAGGGGTCCTTCAAATC +
Preference number: 5 (lower is better)
Translates to: CMTERDQAKVISFWV*LLICLVHKAGVLQI
Trigger: GATTTGAAGGACCCCTGCCTTGTGGACAAGACAGATTAACAGGCAGACCCAAAAGCTTATCACTTTAGCCTGATCTCTCTCTGTCATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 90 bp GCCTGGGTGCAAATCCAATTCCACCACTTACGAATTGTGGGACCTTaGTCAATTCACGTAATCATGCTGTGCCTCAGTTTCCTCTTCTAT +
Preference number: 5 (lower is better)
Translates to: AWVQIQFHHLRIVGP*SIHVIMLCLSFLFY
Trigger: ATAGAAGAGGAAACTGAGGCACAGCATGATTACGTGAATTGACCAAGGTCCCACAATTCGTAAGTGGTGGAATTGGATTTGCACCCAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS-3UTR CAA 90 bp AACCATGTCCTGGTACTGTGGCCTACTGACTGTATTGAATGTACTGGATGGCCTCGGTGCCAAATTGGATaGGTGGTGTTACTGATGATA +
Preference number: 5 (lower is better)
Translates to: NHVLVLWPTDCIECTGWPRCQIG*VVLLMI
Trigger: TATCATCAGTAACACCACCAATCCAATTTGGCACCG...AGGCCATCCAGTACATTCAATACAGTCAGTAGGCCACAGTACCAGGACATGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTGGGTAACCCAGGTCTaGCTGGAACTCGTGATCTTC +
Preference number: 5 (lower is better)
Translates to: THRLANHMSIQCFYDPQFWVTQV*LELVIF
Trigger: GAAGATCACGAGTTCCAGCAAGACCTGGGTTACCCA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCCTCCTCCTGGGCAGTaGCCCCTTCACAGGTGCCTT +
Preference number: 5 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHPPPGQ*PLHRCL
Trigger: AAGGCACCTGTGAAGGGGCAACTGCCCAGGAGGAGG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATTGCGTGCCTCCCAGTTaGGTGGGAGAGCCTCGTCCA +
Preference number: 5 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHCVPPS*VGEPRP
Trigger: TGGACGAGGCTCTCCCACCAAACTGGGAGGCACGCA...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATATCCTCAGGCCTCTCATaGGTCATGGTTCTGCGGATA +
Preference number: 5 (lower is better)
Translates to: SEHFFTLQYVPLVQECNISSGLS*VMVLRI
Trigger: TATCCGCAGAACCATGACCAATGAGAGGCCTGAGGA...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGCCCCATCAATAGCATaGGTATTTTCCTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNAPSIA*VFSSGL
Trigger: GAGGCCTGAGGAAAATACCAATGCTATTGATGGGGC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATGAAATCTGCACTGGCTaGGTGAAAGTCAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNEICTG*VKVSFL
Trigger: GAGGAAGCTGACTTTCACCAAGCCAGTGCAGATTTC...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGGCAGCTCTAGCTGTTaGTTCGCGAACATGTTGAGG +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWGSSSC*FANMLR
Trigger: CCTCAACATGTTCGCGAACAAACAGCTAGAGCTGCC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGATGAACCAGCGCACTaGTGGGTCTACTGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: THRLANHMSIQCFYDPQFDEPAH*WVYCSE
Trigger: TTCAGAGCAGTAGACCCACAAGTGCGCTGGTTCATC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCCTCTATATTCTGTGTaGTTTCTCCAATCACTTAGG +
Preference number: 5 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIPLYSV*FLQSLR
Trigger: CCTAAGTGATTGGAGAAACAACACAGAATATAGAGG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACAGTCGTTGTTCATTGTaGAATCTTTCCACTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHSRCSL*NLSTAA
Trigger: GGCTGCAGTGGAAAGATTCAACAATGAACAACGACT...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCTTAGTCGTTGTTCATaGTTGAATCTTTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: LGCSLGIKLTQILPRGLILSRCS*LNLSTA
Trigger: TGCAGTGGAAAGATTCAACAATGAACAACGACTAAG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGTTGATTGAAAGACGGTaGGGTTGTTCCCTGGGCATC +
Preference number: 5 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEELIERR*GCSLGI
Trigger: GATGCCCAGGGAACAACCCAACCGTCTTTCAATCAA...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp AGAAGTGGTTTGGGCTCAGGGATTGGGATTTTTCACACTGAAAACCAATGGTGCGGCAGTCAAGAACTGTaGATTGAAAGACGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: RSGLGSGIGIFHTENQWCGSQEL*IERRLG
Trigger: ACCCAACCGTCTTTCAATCAACAGTTCTTGACTGCC...GCACCATTGGTTTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAACCACTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCTTAACTTGCTCTAATTaGGAGATTGGGCCAAATGCT +
Preference number: 5 (lower is better)
Translates to: LGCSLGIKLTQILPRGLILTCSN*EIGPNA
Trigger: AGCATTTGGCCCAATCTCCAAATTAGAGCAAGTTAA...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGGGTTGTTCCCTGGGCATCAAGCTCACCCAAATCCTTCCAAGAGGACTCATCCCACTTGCATATACATaGTCACAGACCATCTTATTG +
Preference number: 5 (lower is better)
Translates to: LGCSLGIKLTQILPRGLIPLAYT*SQTILL
Trigger: CAATAAGATGGTCTGTGACAATGTATATGCAAGTGG...GATGAGTCCTCTTGGAAGGATTTGGGTGAGCTTGATGCCCAGGGAACAACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATACCTTTATCTGCTGCTaGGAGAATGCCAGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNTFICC*ENASPE
Trigger: TTCAGGGCTGGCATTCTCCAAGCAGCAGATAAAGGT...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACCAGTCTGAAACCAAATaGAAGTATGTTCCTACCCCC +
Preference number: 5 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHQSETK*KYVPTP
Trigger: GGGGGTAGGAACATACTTCAATTTGGTTTCAGACTG...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS TCA 90 bp AAGCAAAGATTCTTCTCATTGCGTGGGAGGCGAGAATTCTGCCACTaGACCAGCAGTGCTTCCTCATATTCTTCTCATTGCTTGGTGTTT +
Preference number: 5 (lower is better)
Translates to: KQRFFSLRGRREFCH*TSSASSYSSHCLVF
Trigger: AAACACCAAGCAATGAGAAGAATATGAGGAAGCACTGCTGGTTCAGTGGCAGAATTCTCGCCTCCCACGCAATGAGAAGAATCTTTGCTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642884.1
CDS GCA 90 bp GCCACTGCCTGTCTCTGTGATGTCAGGCAAGTCACTGAACCATTCTaGACATGGAGCTGCTTATCTGTACATGGCAATAATAATAGTACT +
Preference number: 5 (lower is better)
Translates to: ATACLCDVRQVTEPF*TWSCLSVHGNNNST
Trigger: AGTACTATTATTATTGCCATGTACAGATAAGCAGCTCCATGTGCAGAATGGTTCAGTGACTTGCCTGACATCACAGAGACAGGCAGTGGC
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 90 bp AAAGTGTGTCTGGCAAGTTATGACTGGCAAGAAGGGACCAACCCCTaGCTTAACAAGTTAAATCTCAACACAGAGCAGAAACAGATGCAG +
Preference number: 5 (lower is better)
Translates to: KVCLASYDWQEGTNP*LNKLNLNTEQKQMQ
Trigger: CTGCATCTGTTTCTGCTCTGTGTTGAGATTTAACTTGTTAAGGCAGGGGTTGGTCCCTTCTTGCCAGTCATAACTTGCCAGACACACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 90 bp TGTGAGGTCAGCTCTCTACCAGCCTACACTCAGGGTTCTCTACAATaGCAACTTCAAGTTGTAAGACCCAGATTAGTAAAAACATCCCCA +
Preference number: 5 (lower is better)
Translates to: CEVSSLPAYTQGSLQ*QLQVVRPRLVKTSP
Trigger: TGGGGATGTTTTTACTAATCTGGGTCTTACAACTTGAAGTTGGCATTGTAGAGAACCCTGAGTGTAGGCTGGTAGAGAGCTGACCTCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 90 bp TACCTCCATTATTATTTACCCCATGGGCAACACAGGATTTACAGCTaGCCTTTCTTTCAGCATAATGGTGCCAGAGAAGAGTCATTGGCC +
Preference number: 5 (lower is better)
Translates to: YLHYYLPHGQHRIYS*PFFQHNGAREESLA
Trigger: GGCCAATGACTCTTCTCTGGCACCATTATGCTGAAAGAAAGGGCAGCTGTAAATCCTGTGTTGCCCATGGGGTAAATAATAATGGAGGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS CCA 90 bp TCTCTGTCACGCCCATCTGACTCTAATTCAGTGTCATTTTACCTGTaGTCCAGGGACATAATCACAAGCCCAATTCTCTTTCATCTCTCC +
Preference number: 5 (lower is better)
Translates to: SLSRPSDSNSVSFYL*SRDIITSPILFHLS
Trigger: GGAGAGATGAAAGAGAATTGGGCTTGTGATTATGTCCCTGGACCACAGGTAAAATGACACTGAATTAGAGTCAGATGGGCGTGACAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS-3UTR CAA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAATTAGAATCCCAGAAGTaGGCTGGAGAATTCTCATCT +
Preference number: 5 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKLESQK*AGEFSS
Trigger: AGATGAGAATTCTCCAGCCAACTTCTGGGATTCTAA...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCGGTGCCAAATTGGATaGGTGGTGTTACTGATGATA +
Preference number: 5 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVRCQIG*VVLLMI
Trigger: TATCATCAGTAACACCACCAATCCAATTTGGCACCG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTTGATCACCGATGGCTaGTCGCTCCAGCAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGLITDG*SLQQPL
Trigger: CAGAGGCTGCTGGAGCGACAAGCCATCGGTGATCAA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CAA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTTTGATCACCGATGGCTaGTCGCTCCAGCAGCCTCTG +
Preference number: 5 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPLITDG*SLQQPL
Trigger: CAGAGGCTGCTGGAGCGACAAGCCATCGGTGATCAA...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CAA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCGTTGTAGCTGAGCATTaGATCACCGATGGCTTGTCG +
Preference number: 5 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFVVAEH*ITDGLS
Trigger: CGACAAGCCATCGGTGATCAAATGCTCAGCTACAAC...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGTTGTAGCTGAGCATTaGATCACCGATGGCTTGTCG +
Preference number: 5 (lower is better)
Translates to: THRLANHMSIQCFYDPQFVVAEH*ITDGLS
Trigger: CGACAAGCCATCGGTGATCAAATGCTCAGCTACAAC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CAA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTCTGTGTCTGCGCCACTaGTGGGCTGATCTACCTCTT +
Preference number: 5 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTLCLRH*WADLPL
Trigger: AAGAGGTAGATCAGCCCACAAGTGGCGCAGACACAG...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAGTTCAGCTGCTCCATTaGCTGTATGGAGTTAGATCT +
Preference number: 5 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRVQLLH*LYGVRS
Trigger: AGATCTAACTCCATACAGCAAATGGAGCAGCTGAAC...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGAAATCTGCACTGGCTaGGTGAAAGTCAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIEICTG*VKVSFL
Trigger: GAGGAAGCTGACTTTCACCAAGCCAGTGCAGATTTC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAGTGTCCCTCCGGACTTaGGTGATCATGTGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIVSLRT*VIMCFK
Trigger: TTTGAAGCACATGATCACCAAAGTCCGGAGGGACAC...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCTTGTTCGCGAACATGTaGAGGAATCCCACAAGGTCG +
Preference number: 5 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFLFANM*RNPTRS
Trigger: CGACCTTGTGGGATTCCTCAACATGTTCGCGAACAA...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGGCCTACTGACTGTATaGAATGTACTGGATGGCCTG +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWGLLTV*NVLDGL
Trigger: CAGGCCATCCAGTACATTCAATACAGTCAGTAGGCC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACATGTCATGGATATCATaGTCTTTCATCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHMSWIS*SFIHCR
Trigger: CCTGCAGTGGATGAAAGACAATGATATCCATGACAT...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTAGTCGTTGTTCATTGTaGAATCTTTCCACTGCAGCC +
Preference number: 5 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVSRCSL*NLSTAA
Trigger: GGCTGCAGTGGAAAGATTCAACAATGAACAACGACT...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGGTTTGGGCTCAGGGATaGGGATTTTTCACACTGAAA +
Preference number: 5 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLVWAQG*GFFTLK
Trigger: TTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAAC...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACACAAGAAAAATGTTTaGACCCCAGAAGTGGTTTGG +
Preference number: 5 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKHKKNV*TPEVVW
Trigger: CCAAACCACTTCTGGGGTCAAAACATTTTTCTTGTG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATTTGGAGGAAGCATCTaGGAAACCTCACTGAATGTG +
Preference number: 5 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRFGGSI*ETSLNV
Trigger: CACATTCAGTGAGGTTTCCAAGATGCTTCCTCCAAA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGTTTGGAGGAAGCATCTaGGAAACCTCACTGAATGTG +
Preference number: 5 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLFGGSI*ETSLNV
Trigger: CACATTCAGTGAGGTTTCCAAGATGCTTCCTCCAAA...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp CATCAAACTCACGGCAGTAAGATGGAAGTAAAATGGCTAAGGTCCAGAGTGCTGATTAGCATTATATTCTaGCGGGGTGGCACAACTGCT +
Preference number: 5 (lower is better)
Translates to: HQTHGSKMEVKWLRSRVLISIIF*RGGTTA
Trigger: AGCAGTTGTGCCACCCCGCAAGAATATAATGCTAAT...CAGCACTCTGGACCTTAGCCATTTTACTTCCATCTTACTGCCGTGAGTTTGATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTCTGCTTCTCTGGGATaGGCTGCCTACAAAGAGACA +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWSASLG*AAYKET
Trigger: TGTCTCTTTGTAGGCAGCCAATCCCAGAGAAGCAGA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644256.1
CDS TCA 90 bp CTCACCTATGGCCTTATCTGTGACATCCTCCCCAACCACCCTCTATaGAATAACATTCTCCATTCCTGTCTTTCACTAGACCTCATTTGT +
Preference number: 5 (lower is better)
Translates to: LTYGLICDILPNHPL*NNILHSCLSLDLIC
Trigger: ACAAATGAGGTCTAGTGAAAGACAGGAATGGAGAATGTTATTTCATAGAGGGTGGTTGGGGAGGATGTCACAGATAAGGCCATAGGTGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 90 bp ATGAAAACATTGCTTACCTATCAAGCAAAGATTCTTCTCATTGCGTaGGAGGCGAGAATTCTGCCACTGAACCAGCAGTGCTTCCTCATA +
Preference number: 5 (lower is better)
Translates to: MKTLLTYQAKILLIA*EARILPLNQQCFLI
Trigger: TATGAGGAAGCACTGCTGGTTCAGTGGCAGAATTCTCGCCTCCCACGCAATGAGAAGAATCTTTGCTTGATAGGTAAGCAATGTTTTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642884.1
CDS-3UTR CAA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTAATGAGGTTCTGGGCTaGCCCCAGCGTGTACTCGTA +
Preference number: 5 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPNEVLG*PQRVLV
Trigger: TACGAGTACACGCTGGGGCAAGCCCAGAACCTCATT...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CAA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGAATGAGGTTCTGGGCTaGCCCCAGCGTGTACTCGTA +
Preference number: 5 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGNEVLG*PQRVLV
Trigger: TACGAGTACACGCTGGGGCAAGCCCAGAACCTCATT...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CAA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAAATGATGGGACGGCTCTaGGCAAATTTGTCTTTAATT +
Preference number: 5 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKMMGRL*ANLSLI
Trigger: AATTAAAGACAAATTTGCCAAGAGCCGTCCCATCAT...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATCTCCATTCACAGAATaGACTCCAAGTATTGTGCCA +
Preference number: 5 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRSPFTE*TPSIVP
Trigger: TGGCACAATACTTGGAGTCAATTCTGTGAATGGAGA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCTGTGTCTGCGCCACTaGTGGGCTGATCTACCTCTT +
Preference number: 5 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGLCLRH*WADLPL
Trigger: AAGAGGTAGATCAGCCCACAAGTGGCGCAGACACAG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTTCCTCAGGCCTCTCATaGGTCATGGTTCTGCGGATA +
Preference number: 5 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTSSGLS*VMVLRI
Trigger: TATCCGCAGAACCATGACCAATGAGAGGCCTGAGGA...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTGATGAACCAGCGCACTaGTGGGTCTACTGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTDEPAH*WVYCSE
Trigger: TTCAGAGCAGTAGACCCACAAGTGCGCTGGTTCATC...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTTGCCTTGTCAGGTGTaGCCGATGAACCAGCGCACT +
Preference number: 5 (lower is better)
Translates to: HNKWKKFGSQELLIERRLLPCQV*PMNQRT
Trigger: AGTGCGCTGGTTCATCGGCAACACCTGACAAGGCAA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGCAAGGTCTGCATCGCTaGAAAGGCGCACCAATCCTG +
Preference number: 5 (lower is better)
Translates to: HNKWKKFGSQELLIERRLQGLHR*KGAPIL
Trigger: CAGGATTGGTGCGCCTTTCAAGCGATGCAGACCTTG...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTATGTCATGGATATCATaGTCTTTCATCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVMSWIS*SFIHCR
Trigger: CCTGCAGTGGATGAAAGACAATGATATCCATGACAT...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGTCTGTAACTGGGATATaGGCACCCCCTGGCTTTAAT +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWSVTGI*APPGFN
Trigger: ATTAAAGCCAGGGGGTGCCAATATCCCAGTTACAGA...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCTGGAAAACCTCTATATTCTGTGTaGTTTCTCCAATCACTTAGG +
Preference number: 5 (lower is better)
Translates to: QEDSSPVPKCDRALVPGKPLYSV*FLQSLR
Trigger: CCTAAGTGATTGGAGAAACAACACAGAATATAGAGG...TTTTCCAGGAACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGAGTCGTTGTTCATTGTaGAATCTTTCCACTGCAGCC +
Preference number: 5 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEESRCSL*NLSTAA
Trigger: GGCTGCAGTGGAAAGATTCAACAATGAACAACGACT...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGGCAGTCAAGAACTGTaGATTGAAAGACGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWGSQEL*IERRLG
Trigger: ACCCAACCGTCTTTCAATCAACAGTTCTTGACTGCC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGCTCTAATTTGGAGATaGGGCCAAATGCTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWALIWR*GQMLPV
Trigger: AACTGGCAGCATTTGGCCCAATCTCCAAATTAGAGC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGCTCTAATTTGGAGATaGGGCCAAATGCTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: THRLANHMSIQCFYDPQFALIWR*GQMLPV
Trigger: AACTGGCAGCATTTGGCCCAATCTCCAAATTAGAGC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGAATTGACTCCAAGTATTGTGCCAACAGCTTCTGGAGAGGCATCCGATGGCTTCCACTTGCATATACATaGTCACAGACCATCTTATTG +
Preference number: 5 (lower is better)
Translates to: RIDSKYCANSFWRGIRWLPLAYT*SQTILL
Trigger: CAATAAGATGGTCTGTGACAATGTATATGCAAGTGG...AAGCCATCGGATGCCTCTCCAGAAGCTGTTGGCACAATACTTGGAGTCAATTCT
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTATCTCAAAGAAATGTTaGGGCAATGCCTGTAAACCC +
Preference number: 5 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVISKKC*GNACKP
Trigger: GGGTTTACAGGCATTGCCCAAACATTTCTTTGAGAT...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCCACTTTACACTCTCGTaGTGTAAGTGCATCCTGGCT +
Preference number: 5 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFHFTLS*CKCILA
Trigger: AGCCAGGATGCACTTACACAACGAGAGTGTAAAGTG...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCACTTTACACTCTCGTaGTGTAAGTGCATCCTGGCT +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWHFTLS*CKCILA
Trigger: AGCCAGGATGCACTTACACAACGAGAGTGTAAAGTG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTGATAGTAACCAGAAGTaGACTGATGGTTCCTTACCT +
Preference number: 5 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVDSNQK*TDGSLP
Trigger: AGGTAAGGAACCATCAGTCAACTTCTGGTTACTATC...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS GCA 90 bp CAAATACCTACAACACAAGCTGTATCACTAGGGATAAGGAAGCACTaGCTGAGAACCCTTTTCTCTAATCAGCAGAGCATAGAGAGAGAT +
Preference number: 5 (lower is better)
Translates to: QIPTTQAVSLGIRKH*LRTLFSNQQSIERD
Trigger: ATCTCTCTCTATGCTCTGCTGATTAGAGAAAAGGGTTCTCAGGCAGTGCTTCCTTATCCCTAGTGATACAGCTTGTGTTGTAGGTATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 90 bp GCCTGTCTCTGTGATGTCAGGCAAGTCACTGAACCATTCTGCACATaGAGCTGCTTATCTGTACATGGCAATAATAATAGTACTGCTTTA +
Preference number: 5 (lower is better)
Translates to: ACLCDVRQVTEPFCT*SCLSVHGNNNSTAL
Trigger: TAAAGCAGTACTATTATTATTGCCATGTACAGATAAGCAGCTCCATGTGCAGAATGGTTCAGTGACTTGCCTGACATCACAGAGACAGGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 90 bp ATTTTTCAAAGTCCTTACTTGGACCATCTGTGCCCTTCCATCCAATaGAATATTTACAGGCACTGGGCTCTCAGGCTGTTGAACCAAATA +
Preference number: 5 (lower is better)
Translates to: IFQSPYLDHLCPSIQ*NIYRHWALRLLNQI
Trigger: TATTTGGTTCAACAGCCTGAGAGCCCAGTGCCTGTAAATATTCCATTGGATGGAAGGGCACAGATGGTCCAAGTAAGGACTTTGAAAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 90 bp CAAGATCAGAGGGTATTACGTCTTCTCCATGAAGTGGGTAGCATGTaGATTGGCTTCTTTCTAAGTACAACTCCTTTTCTTCATGAAGCC +
Preference number: 5 (lower is better)
Translates to: QDQRVLRLLHEVGSM*IGFFLSTTPFLHEA
Trigger: GGCTTCATGAAGAAAAGGAGTTGTACTTAGAAAGAAGCCAATCCACATGCTACCCACTTCATGGAGAAGACGTAATACCCTCTGATCTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644256.1
CDS CCA 90 bp TGGAGTCCCTTCAGTTCGGATAAATTGGATCTTCTCCCTATTATGTaGCAGCTACTGTGTAATACCCTAGGAATACACATCCAAGAGAGA +
Preference number: 5 (lower is better)
Translates to: WSPFSSDKLDLLPIM*QLLCNTLGIHIQER
Trigger: TCTCTCTTGGATGTGTATTCCTAGGGTATTACACAGTAGCTGCCACATAATAGGGAGAAGATCCAATTTATCCGAACTGAAGGGACTCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645468.1
CDS-3UTR CAA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAATGATGGGACGGCTCTaGGCAAATTTGTCTTTAATT +
Preference number: 5 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRMMGRL*ANLSLI
Trigger: AATTAAAGACAAATTTGCCAAGAGCCGTCCCATCAT...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTTCCCCAGAAAACGCTaGATGATGGGACGGCTCTTG +
Preference number: 5 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGFPRKR*MMGRLL
Trigger: CAAGAGCCGTCCCATCATCAAGCGTTTTCTGGGGAA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTGGGTAACCCAGGTCTaGCTGGAACTCGTGATCTTC +
Preference number: 5 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGWVTQV*LELVIF
Trigger: GAAGATCACGAGTTCCAGCAAGACCTGGGTTACCCA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTGTTCAGCTGCTCCATTaGCTGTATGGAGTTAGATCT +
Preference number: 5 (lower is better)
Translates to: THRLANHMSIQCFYDPQFVQLLH*LYGVRS
Trigger: AGATCTAACTCCATACAGCAAATGGAGCAGCTGAAC...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTGTGTCCCTCCGGACTTaGGTGATCATGTGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTVSLRT*VIMCFK
Trigger: TTTGAAGCACATGATCACCAAAGTCCGGAGGGACAC...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGGCAGCTCTAGCTGTTaGTTCGCGAACATGTTGAGG +
Preference number: 5 (lower is better)
Translates to: HNKWKKFGSQELLIERRLGSSSC*FANMLR
Trigger: CCTCAACATGTTCGCGAACAAACAGCTAGAGCTGCC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp GCTCCTGTAGAATTTCAAAGATATTGGGTTGACGTAGAAATGCAACAATCTTGTGGCAGCTCTAGCTGTTaGTTCGCGAACATGTTGAGG +
Preference number: 5 (lower is better)
Translates to: APVEFQRYWVDVEMQQSCGSSSC*FANMLR
Trigger: CCTCAACATGTTCGCGAACAAACAGCTAGAGCTGCC...ACAAGATTGTTGCATTTCTACGTCAACCCAATATCTTTGAAATTCTACAGGAGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATATGTCATGGATATCATaGTCTTTCATCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNMSWIS*SFIHCR
Trigger: CCTGCAGTGGATGAAAGACAATGATATCCATGACAT...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCCAATTCCAGTTCTCTaGCATCAAAAACAGATACCA +
Preference number: 5 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVPIPVL*HQKQIP
Trigger: TGGTATCTGTTTTTGATGCAAGAGAACTGGAATTGG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGACTTAGTCGTTGTTCATaGTTGAATCTTTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRLSRCS*LNLSTA
Trigger: TGCAGTGGAAAGATTCAACAATGAACAACGACTAAG...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGATTAACTTGCTCTAATTaGGAGATTGGGCCAAATGCT +
Preference number: 5 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRLTCSN*EIGPNA
Trigger: AGCATTTGGCCCAATCTCCAAATTAGAGCAAGTTAA...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTAATGTCCCTTCACCTTaGGTACATTCAGTGCAAAAT +
Preference number: 5 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVNVPSP*VHSVQN
Trigger: ATTTTGCACTGAATGTACCAAAGGTGAAGGGACATT...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAAATGTCCCTTCACCTTaGGTACATTCAGTGCAAAAT +
Preference number: 5 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRNVPSP*VHSVQN
Trigger: ATTTTGCACTGAATGTACCAAAGGTGAAGGGACATT...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AAATCCTTCCAAGAGGACTCATCTCCAGTCCCCAAATGTGACAGAGCACTTGTTCATCCTGTAAAGTATTaGATGGATGGAAGAGAGTCT +
Preference number: 5 (lower is better)
Translates to: KSFQEDSSPVPKCDRALVHPVKY*MDGRES
Trigger: AGACTCTCTTCCATCCATCAAATACTTTACAGGATG...AACAAGTGCTCTGTCACATTTGGGGACTGGAGATGAGTCCTCTTGGAAGGATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGATCTCAAAGAAATGTTaGGGCAATGCCTGTAAACCC +
Preference number: 5 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEISKKC*GNACKP
Trigger: GGGTTTACAGGCATTGCCCAAACATTTCTTTGAGAT...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp AGCTCCCTACACACTTTACACTCTCGTTGTGTAAGTGCATCCTGGCTTCAACACAAAGTGTACTGTTATTaGGGAAAAAGTTGGATGCCT +
Preference number: 5 (lower is better)
Translates to: SSLHTLHSRCVSASWLQHKVYCY*GKSWMP
Trigger: AGGCATCCAACTTTTTCCCAAATAACAGTACACTTT...GTGTTGAAGCCAGGATGCACTTACACAACGAGAGTGTAAAGTGTGTAGGGAGCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp CCAATGTTCAATCATTCTTCTAGAAGGCAGCTTCTGAACCTGCCTGTCCACAGAAAACTGAGACTCAGTTaGGAGATTAGACCACATTCT +
Preference number: 5 (lower is better)
Translates to: PMFNHSSRRQLLNLPVHRKLRLS*EIRPHS
Trigger: AGAATGTGGTCTAATCTCCAAACTGAGTCTCAGTTT...TCTGTGGACAGGCAGGTTCAGAAGCTGCCTTCTAGAAGAATGATTGAACATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCCAGTCTGAAACCAAATaGAAGTATGTTCCTACCCCC +
Preference number: 5 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFQSETK*KYVPTP
Trigger: GGGGGTAGGAACATACTTCAATTTGGTTTCAGACTG...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGGAGTCAGGGGTTCAGTaGAGAATAAGAATACAGACT +
Preference number: 5 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEESGVQ*RIRIQT
Trigger: AGTCTGTATTCTTATTCTCAACTGAACCCCTGACTC...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS TCA 90 bp TGGTTAAGGGAGACCAGCCGTTCCTTAAGAGGAGGAATAGGATGCTaGCATGAATCCTACAGTATATCCCTTATAAGTCATCATGCATTT +
Preference number: 5 (lower is better)
Translates to: WLRETSRSLRGGIGC*HESYSISLISHHAF
Trigger: AAATGCATGATGACTTATAAGGGATATACTGTAGGATTCATGTCAGCATCCTATTCCTCCTCTTAAGGAACGGCTGGTCTCCCTTAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 90 bp TATAATACTACCAGTATTTTTCAAAGTCCTTACTTGGACCATCTGTaGCCTTCCATCCAATGGAATATTTACAGGCACTGGGCTCTCAGG +
Preference number: 5 (lower is better)
Translates to: YNTTSIFQSPYLDHL*PSIQWNIYRHWALR
Trigger: CCTGAGAGCCCAGTGCCTGTAAATATTCCATTGGATGGAAGGGCACAGATGGTCCAAGTAAGGACTTTGAAAAATACTGGTAGTATTATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS-3UTR CAA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGTTGTAGCTGAGCATTaGATCACCGATGGCTTGTCG +
Preference number: 5 (lower is better)
Translates to: HNKWKKFGSQELLIERRLVVAEH*ITDGLS
Trigger: CGACAAGCCATCGGTGATCAAATGCTCAGCTACAAC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
CDS-3UTR CAA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCTCTCCATTCACAGAATaGACTCCAAGTATTGTGCCA +
Preference number: 5 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFSPFTE*TPSIVP
Trigger: TGGCACAATACTTGGAGTCAATTCTGTGAATGGAGA...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGGCCTGGAGTGGCCATaGTGTTCGATAGCATCTAAG +
Preference number: 5 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHGLEWP*CSIASK
Trigger: CTTAGATGCTATCGAACACAATGGCCACTCCAGGCC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTGAAATCTGCACTGGCTaGGTGAAAGTCAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPEICTG*VKVSFL
Trigger: GAGGAAGCTGACTTTCACCAAGCCAGTGCAGATTTC...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGTGTCCCTCCGGACTTaGGTGATCATGTGCTTCAAA +
Preference number: 5 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGVSLRT*VIMCFK
Trigger: TTTGAAGCACATGATCACCAAAGTCCGGAGGGACAC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTTGTTCGCGAACATGTaGAGGAATCCCACAAGGTCG +
Preference number: 5 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGLFANM*RNPTRS
Trigger: CGACCTTGTGGGATTCCTCAACATGTTCGCGAACAA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTTTGTTCGCGAACATGTaGAGGAATCCCACAAGGTCG +
Preference number: 5 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPLFANM*RNPTRS
Trigger: CGACCTTGTGGGATTCCTCAACATGTTCGCGAACAA...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGATGAACCAGCGCACTaGTGGGTCTACTGCTCTGAA +
Preference number: 5 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHDEPAH*WVYCSE
Trigger: TTCAGAGCAGTAGACCCACAAGTGCGCTGGTTCATC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGGCCTACTGACTGTATaGAATGTACTGGATGGCCTG +
Preference number: 5 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGGLLTV*NVLDGL
Trigger: CAGGCCATCCAGTACATTCAATACAGTCAGTAGGCC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp GCTCCTGTAGAATTTCAAAGATATTGGGTTGACGTAGAAATGCAACAATCTTGTGGCCTACTGACTGTATaGAATGTACTGGATGGCCTG +
Preference number: 5 (lower is better)
Translates to: APVEFQRYWVDVEMQQSCGLLTV*NVLDGL
Trigger: CAGGCCATCCAGTACATTCAATACAGTCAGTAGGCC...ACAAGATTGTTGCATTTCTACGTCAACCCAATATCTTTGAAATTCTACAGGAGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp CTATTAACTGTGACACACTGTGTGGTGAACGTAATGACTGAGGTTGGTGAAGAGCATCCTGTAAAGTATTaGATGGATGGAAGAGAGTCT +
Preference number: 5 (lower is better)
Translates to: LLTVTHCVVNVMTEVGEEHPVKY*MDGRES
Trigger: AGACTCTCTTCCATCCATCAAATACTTTACAGGATG...CTCTTCACCAACCTCAGTCATTACGTTCACCACACAGTGTGTCACAGTTAATAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGATCTCAAAGAAATGTTaGGGCAATGCCTGTAAACCC +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWISKKC*GNACKP
Trigger: GGGTTTACAGGCATTGCCCAAACATTTCTTTGAGAT...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCTCCTGGCTTCAACACTaGACCAGTATTGACATACTA +
Preference number: 5 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFSWLQH*TSIDIL
Trigger: TAGTATGTCAATACTGGTCAAGTGTTGAAGCCAGGA...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCACAAGAAAAATGTTTaGACCCCAGAAGTGGTTTGG +
Preference number: 5 (lower is better)
Translates to: THRLANHMSIQCFYDPQFHKKNV*TPEVVW
Trigger: CCAAACCACTTCTGGGGTCAAAACATTTTTCTTGTG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGGAGTCAGGGGTTCAGTaGAGAATAAGAATACAGACT +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWESGVQ*RIRIQT
Trigger: AGTCTGTATTCTTATTCTCAACTGAACCCCTGACTC...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS TCA 90 bp TCAAACTTAAATATCAGTGCTTCCAAAGACTCTTCCCTATATCTTTaGGATCTCAACAAACTCTGGTCCAACAATGAAGGGAGGCAGCTG +
Preference number: 5 (lower is better)
Translates to: SNLNISASKDSSLYL*DLNKLWSNNEGRQL
Trigger: CAGCTGCCTCCCTTCATTGTTGGACCAGAGTTTGTTGAGATCTCAAAGATATAGGGAAGAGTCTTTGGAAGCACTGATATTTAAGTTTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS TCA 90 bp CTAAATTACTTGGCTTTCAAGGATGTTTCTAAAACCCTAGTTTCATaGTCATGGCTGACGGAGAATACAACCACCAGAGCAGAATTCCAC +
Preference number: 5 (lower is better)
Translates to: LNYLAFKDVSKTLVS*SWLTENTTTRAEFH
Trigger: GTGGAATTCTGCTCTGGTGGTTGTATTCTCCGTCAGCCATGATCATGAAACTAGGGTTTTAGAAACATCCTTGAAAGCCAAGTAATTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 90 bp CACTTACGAATTGTGGGACCTTGGTCAATTCACGTAATCATGCTGTaGCTCAGTTTCCTCTTCTATATAATGTGGATAAAAATAGCACCC +
Preference number: 5 (lower is better)
Translates to: HLRIVGPWSIHVIML*LSFLFYIMWIKIAP
Trigger: GGGTGCTATTTTTATCCACATTATATAGAAGAGGAAACTGAGGCACAGCATGATTACGTGAATTGACCAAGGTCCCACAATTCGTAAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 90 bp AATAATACCTACCTTATAAATTATCAGGAGGCTCCCACAGCATCCTaGCAAGCCCTTGCTATCTTCATGATAATTGCTGAAGATATCCCT +
Preference number: 5 (lower is better)
Translates to: NNTYLINYQEAPTAS*QALAIFMIIAEDIP
Trigger: AGGGATATCTTCAGCAATTATCATGAAGATAGCAAGGGCTTGGCAGGATGCTGTGGGAGCCTCCTGATAATTTATAAGGTAGGTATTATT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 90 bp TACAGCAAGAGAACAAATCCACTCAGACACCACAGTATCAGAGCATaGATCATACAGAAACAGAGAACATTCCATGTCATTATACAGGTG +
Preference number: 5 (lower is better)
Translates to: YSKRTNPLRHHSIRA*IIQKQRTFHVIIQV
Trigger: CACCTGTATAATGACATGGAATGTTCTCTGTTTCTGTATGATGCATGCTCTGATACTGTGGTGTCTGAGTGGATTTGTTCTCTTGCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 90 bp GGAAAGGGATGGTTAGTGGCTTTACCCAGGAAGTACATGATTTTGTaGCAATGTGTCGATCTGATTTCAGTTCCAGTTCTAAATTACTTG +
Preference number: 5 (lower is better)
Translates to: GKGWLVALPRKYMIL*QCVDLISVPVLNYL
Trigger: CAAGTAATTTAGAACTGGAACTGAAATCAGATCGACACATTGGCACAAAATCATGTACTTCCTGGGTAAAGCCACTAACCATCCCTTTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 90 bp AAAGAAGAGGCATTTAGGGTAAAAGAGCAATGTCTAGGAAAGGGATaGTTAGTGGCTTTACCCAGGAAGTACATGATTTTGTGCCAATGT +
Preference number: 5 (lower is better)
Translates to: KEEAFRVKEQCLGKG*LVALPRKYMILCQC
Trigger: ACATTGGCACAAAATCATGTACTTCCTGGGTAAAGCCACTAACCATCCCTTTCCTAGACATTGCTCTTTTACCCTAAATGCCTCTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS-3UTR CAA 90 bp AAAGCGGAAACCTATGGTGCACACCATGCAGGCACTCATAAGCAAGAAATGAATAATTCTCCATACAATTaGCCCTTTTTGTGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: KAETYGAHHAGTHKQEMNNSPYN*PFLCSS
Trigger: ACTGGAACACAAAAAGGGCAAATTGTATGGAGAATT...ATTCATTTCTTGCTTATGAGTGCCTGCATGGTGTGCACCATAGGTTTCCGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AATCTTGACAGTTGGTCAATAATTAGCATTATATTCTTGCGGGGTGGCACAACTCGGTGCCAAATTGGATaGGTGGTGTTACTGATGATA +
Preference number: 5 (lower is better)
Translates to: NLDSWSIISIIFLRGGTTRCQIG*VVLLMI
Trigger: TATCATCAGTAACACCACCAATCCAATTTGGCACCG...AGTTGTGCCACCCCGCAAGAATATAATGCTAATTATTGACCAACTGTCAAGATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGATGATGGGACGGCTCTaGGCAAATTTGTCTTTAATT +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWMMGRL*ANLSLI
Trigger: AATTAAAGACAAATTTGCCAAGAGCCGTCCCATCAT...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATGCCCCATCAATAGCATaGGTATTTTCCTCAGGCCTC +
Preference number: 5 (lower is better)
Translates to: IRPESLVIWVHSPEENIYAPSIA*VFSSGL
Trigger: GAGGCCTGAGGAAAATACCAATGCTATTGATGGGGC...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATGAAATCTGCACTGGCTaGGTGAAAGTCAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: IRPESLVIWVHSPEENIYEICTG*VKVSFL
Trigger: GAGGAAGCTGACTTTCACCAAGCCAGTGCAGATTTC...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATGGCCTACTGACTGTATaGAATGTACTGGATGGCCTG +
Preference number: 5 (lower is better)
Translates to: IRPESLVIWVHSPEENIYGLLTV*NVLDGL
Trigger: CAGGCCATCCAGTACATTCAATACAGTCAGTAGGCC...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTCTGTAACTGGGATATaGGCACCCCCTGGCTTTAAT +
Preference number: 5 (lower is better)
Translates to: HNKWKKFGSQELLIERRLSVTGI*APPGFN
Trigger: ATTAAAGCCAGGGGGTGCCAATATCCCAGTTACAGA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGTCTGTAACTGGGATATaGGCACCCCCTGGCTTTAAT +
Preference number: 5 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGSVTGI*APPGFN
Trigger: ATTAAAGCCAGGGGGTGCCAATATCCCAGTTACAGA...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp ATTTCCCATCTAGTAGATCAAACTGTGCCTTCATCAGGGAGCATAGCTTTCTTCCCAATTCCAGTTCTCTaGCATCAAAAACAGATACCA +
Preference number: 5 (lower is better)
Translates to: ISHLVDQTVPSSGSIAFFPIPVL*HQKQIP
Trigger: TGGTATCTGTTTTTGATGCAAGAGAACTGGAATTGG...GAAGAAAGCTATGCTCCCTGATGAAGGCACAGTTTGATCTACTAGATGGGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCCAATTCCAGTTCTCTaGCATCAAAAACAGATACCA +
Preference number: 5 (lower is better)
Translates to: THRLANHMSIQCFYDPQFPIPVL*HQKQIP
Trigger: TGGTATCTGTTTTTGATGCAAGAGAACTGGAATTGG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTCTTAGTCGTTGTTCATaGTTGAATCTTTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: THRLANHMSIQCFYDPQFLSRCS*LNLSTA
Trigger: TGCAGTGGAAAGATTCAACAATGAACAACGACTAAG...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATTTGATTGAAAGACGGTaGGGTTGTTCCCTGGGCATC +
Preference number: 5 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHLIERR*GCSLGI
Trigger: GATGCCCAGGGAACAACCCAACCGTCTTTCAATCAA...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGGGCAGTCAAGAACTGTaGATTGAAAGACGGTTGGGT +
Preference number: 5 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGGSQEL*IERRLG
Trigger: ACCCAACCGTCTTTCAATCAACAGTTCTTGACTGCC...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGCTCTAATTTGGAGATaGGGCCAAATGCTGCCAGTT +
Preference number: 5 (lower is better)
Translates to: HNKWKKFGSQELLIERRLALIWR*GQMLPV
Trigger: AACTGGCAGCATTTGGCCCAATCTCCAAATTAGAGC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGCCACTTGCATATACATaGTCACAGACCATCTTATTG +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWPLAYT*SQTILL
Trigger: CAATAAGATGGTCTGTGACAATGTATATGCAAGTGG...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGAATGTCCCTTCACCTTaGGTACATTCAGTGCAAAAT +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWNVPSP*VHSVQN
Trigger: ATTTTGCACTGAATGTACCAAAGGTGAAGGGACATT...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATACATCCTGTAAAGTATTaGATGGATGGAAGAGAGTCT +
Preference number: 5 (lower is better)
Translates to: SEHFFTLQYVPLVQECNIHPVKY*MDGRES
Trigger: AGACTCTCTTCCATCCATCAAATACTTTACAGGATG...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATACCTTTATCTGCTGCTaGGAGAATGCCAGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: IRPESLVIWVHSPEENIYTFICC*ENASPE
Trigger: TTCAGGGCTGGCATTCTCCAAGCAGCAGATAAAGGT...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTTTCAAAATCTTTGAGTaGCTCCTTCACAGATCAGCT +
Preference number: 5 (lower is better)
Translates to: THRLANHMSIQCFYDPQFFKIFE*LLHRSA
Trigger: AGCTGATCTGTGAAGGAGCAACTCAAAGATTTTGAA...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS TCA 90 bp AGCCCATGTTACTTTGACTCTTCTATATTAAGCCACCAAGATACGTaGCACGAAGAGTCCCCAGACATAAATCATCCTCTTGAATTCTTT +
Preference number: 5 (lower is better)
Translates to: SPCYFDSSILSHQDT*HEESPDINHPLEFF
Trigger: AAAGAATTCAAGAGGATGATTTATGTCTGGGGACTCTTCGTGTCACGTATCTTGGTGGCTTAATATAGAAGAGTCAAAGTAACATGGGCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642318.1
CDS-3UTR CAA 90 bp TCCTTGAGAGTGCTTAAAAGGATACATATTAGCATGATGCCCGAGTATGCATGGAATTCTCCATACAATTaGCCCTTTTTGTGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: SLRVLKRIHISMMPEYAWNSPYN*PFLCSS
Trigger: ACTGGAACACAAAAAGGGCAAATTGTATGGAGAATT...CCATGCATACTCGGGCATCATGCTAATATGTATCCTTTTAAGCACTCTCAAGGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TCAGAACATTTCTTCACACTGCAGTACGTGCCTTTAGTGCAGGAGTGTAACATAAATTCTCCATACAATTaGCCCTTTTTGTGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: SEHFFTLQYVPLVQECNINSPYN*PFLCSS
Trigger: ACTGGAACACAAAAAGGGCAAATTGTATGGAGAATT...TATGTTACACTCCTGCACTAAAGGCACGTACTGCAGTGTGAAGAAATGTTCTGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp ACCCATAGGCTGGCAAACCATATGTCAATCCAATGCTTTTATGACCCCCAATTTAATTCTCCATACAATTaGCCCTTTTTGTGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: THRLANHMSIQCFYDPQFNSPYN*PFLCSS
Trigger: ACTGGAACACAAAAAGGGCAAATTGTATGGAGAATT...AAATTGGGGGTCATAAAAGCATTGGATTGACATATGGTTTGCCAGCCTATGGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGCGGTGCCAAATTGGATaGGTGGTGTTACTGATGATA +
Preference number: 5 (lower is better)
Translates to: HNKWKKFGSQELLIERRLRCQIG*VVLLMI
Trigger: TATCATCAGTAACACCACCAATCCAATTTGGCACCG...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp GTCCAAAAGTACTGGTTTCTTCAACTGCTGTCAACAGTTTTTCATAAAGCATGGTCTCCATTCACAGAATaGACTCCAAGTATTGTGCCA +
Preference number: 5 (lower is better)
Translates to: VQKYWFLQLLSTVFHKAWSPFTE*TPSIVP
Trigger: TGGCACAATACTTGGAGTCAATTCTGTGAATGGAGA...CCATGCTTTATGAAAAACTGTTGACAGCAGTTGAAGAAACCAGTACTTTTGGAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS-3UTR CAA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGGTTCAGCTGCTCCATTaGCTGTATGGAGTTAGATCT +
Preference number: 5 (lower is better)
Translates to: HNKWKKFGSQELLIERRLVQLLH*LYGVRS
Trigger: AGATCTAACTCCATACAGCAAATGGAGCAGCTGAAC...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATTCTGTAACTGGGATATaGGCACCCCCTGGCTTTAAT +
Preference number: 5 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHSVTGI*APPGFN
Trigger: ATTAAAGCCAGGGGGTGCCAATATCCCAGTTACAGA...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGAGTCGTTGTTCATTGTaGAATCTTTCCACTGCAGCC +
Preference number: 5 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGSRCSL*NLSTAA
Trigger: GGCTGCAGTGGAAAGATTCAACAATGAACAACGACT...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGAATGTGACAGAGCACTaGTTCCTGGAAAACAACAGC +
Preference number: 5 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGNVTEH*FLENNS
Trigger: GCTGTTGTTTTCCAGGAACAAGTGCTCTGTCACATT...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS TCA 90 bp ATCAGACAATTGTATGGTATTAGAAAAATTCCCTCTAGCAGCTGCTaGGTTATGAAGAAGATGTTGAGACTTGAACCCAGACCTGAAATG +
Preference number: 5 (lower is better)
Translates to: IRQLYGIRKIPSSSC*VMKKMLRLEPRPEM
Trigger: CATTTCAGGTCTGGGTTCAAGTCTCAACATCTTCTTCATAACTCAGCAGCTGCTAGAGGGAATTTTTCTAATACCATACAATTGTCTGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS TCA 90 bp AAGCCAACTAACACAAGTGAGAAGTCCACTTATGCACATCAGCAATaGAAGGCTCAGATCTCATGCAAACTTCTGTACAAATTTTGTCAT +
Preference number: 5 (lower is better)
Translates to: KPTNTSEKSTYAHQQ*KAQISCKLLYKFCH
Trigger: ATGACAAAATTTGTACAGAAGTTTGCATGAGATCTGAGCCTTTCATTGCTGATGTGCATAAGTGGACTTCTCACTTGTGTTAGTTGGCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS CCA 90 bp TTATACCCAGGTATAATACTACCAGTATTTTTCAAAGTCCTTACTTaGACCATCTGTGCCCTTCCATCCAATGGAATATTTACAGGCACT +
Preference number: 5 (lower is better)
Translates to: LYPGIILPVFFKVLT*TICALPSNGIFTGT
Trigger: AGTGCCTGTAAATATTCCATTGGATGGAAGGGCACAGATGGTCCAAGTAAGGACTTTGAAAAATACTGGTAGTATTATACCTGGGTATAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 90 bp TTGGTGTTTTTGCAGTTGTCTGTGCTCATTGTTATAGTTGCTATTTaGTTGCAGTTAAAGATTGGCCTCTTGTTACCCTGCATCAGTAAT +
Preference number: 5 (lower is better)
Translates to: LVFLQLSVLIVIVAI*LQLKIGLLLPCISN
Trigger: ATTACTGATGCAGGGTAACAAGAGGCCAATCTTTAACTGCAACCAAATAGCAACTATAACAATGAGCACAGACAACTGCAAAAACACCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642884.1
CDS-3UTR CAA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGTTAGAATCCCAGAAGTaGGCTGGAGAATTCTCATCT +
Preference number: 5 (lower is better)
Translates to: HNKWKKFGSQELLIERRLLESQK*AGEFSS
Trigger: AGATGAGAATTCTCCAGCCAACTTCTGGGATTCTAA...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCGGTGCCAAATTGGATaGGTGGTGTTACTGATGATA +
Preference number: 5 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHRCQIG*VVLLMI
Trigger: TATCATCAGTAACACCACCAATCCAATTTGGCACCG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGTTCAGCTGCTCCATTaGCTGTATGGAGTTAGATCT +
Preference number: 5 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHVQLLH*LYGVRS
Trigger: AGATCTAACTCCATACAGCAAATGGAGCAGCTGAAC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGATGTCATGGATATCATaGTCTTTCATCCACTGCAGG +
Preference number: 5 (lower is better)
Translates to: HNKWKKFGSQELLIERRLMSWIS*SFIHCR
Trigger: CCTGCAGTGGATGAAAGACAATGATATCCATGACAT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATAATGTGACAGAGCACTaGTTCCTGGAAAACAACAGC +
Preference number: 5 (lower is better)
Translates to: IRPESLVIWVHSPEENIYNVTEH*FLENNS
Trigger: GCTGTTGTTTTCCAGGAACAAGTGCTCTGTCACATT...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATAATGTGACAGAGCACTaGTTCCTGGAAAACAACAGC +
Preference number: 5 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHNVTEH*FLENNS
Trigger: GCTGTTGTTTTCCAGGAACAAGTGCTCTGTCACATT...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGTTTGGGCTCAGGGATaGGGATTTTTCACACTGAAA +
Preference number: 5 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHVWAQG*GFFTLK
Trigger: TTTCAGTGTGAAAAATCCCAATCCCTGAGCCCAAAC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS TCA 90 bp GTCCAAGAGTACCAGATGAAAGACAAACGGCCTGAATTTGAATCCTaGTTTTTCTATTCCCTAGTTCCATCAGCAGATGCAAATTATTTT +
Preference number: 5 (lower is better)
Translates to: VQEYQMKDKRPEFES*FFYSLVPSADANYF
Trigger: AAAATAATTTGCATCTGCTGATGGAACTAGGGAATAGAAAAATCAGGATTCAAATTCAGGCCGTTTGTCTTTCATCTGGTACTCTTGGAC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS CCA 90 bp TACAATCAGGAGACCAAACTTGTATACAGCAAAAATTACAGCAATTaGATGTGGCTAGGAAGACGTGATTTATCAACACACTTCTGCAAT +
Preference number: 5 (lower is better)
Translates to: YNQETKLVYSKNYSN*MWLGRRDLSTHFCN
Trigger: ATTGCAGAAGTGTGTTGATAAATCACGTCTTCCTAGCCACATCCAATTGCTGTAATTTTTGCTGTATACAAGTTTGGTCTCCTGATTGTA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS-3UTR CAA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATTTAGAATCCCAGAAGTaGGCTGGAGAATTCTCATCT +
Preference number: 5 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHLESQK*AGEFSS
Trigger: AGATGAGAATTCTCCAGCCAACTTCTGGGATTCTAA...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp AGTCATATTGTAATGTCCCTTCACCTTTGGTACATTCAGTGCAAAATATTTGGGCCAATTCCAGTTCTCTaGCATCAAAAACAGATACCA +
Preference number: 5 (lower is better)
Translates to: SHIVMSLHLWYIQCKIFGPIPVL*HQKQIP
Trigger: TGGTATCTGTTTTTGATGCAAGAGAACTGGAATTGG...CCCAAATATTTTGCACTGAATGTACCAAAGGTGAAGGGACATTACAATATGACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCCTCTATATTCTGTGTaGTTTCTCCAATCACTTAGG +
Preference number: 5 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPPLYSV*FLQSLR
Trigger: CCTAAGTGATTGGAGAAACAACACAGAATATAGAGG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCTTAGTCGTTGTTCATaGTTGAATCTTTCCACTGCA +
Preference number: 5 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPLSRCS*LNLSTA
Trigger: TGCAGTGGAAAGATTCAACAATGAACAACGACTAAG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTTTAACTTGCTCTAATTaGGAGATTGGGCCAAATGCT +
Preference number: 5 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPLTCSN*EIGPNA
Trigger: AGCATTTGGCCCAATCTCCAAATTAGAGCAAGTTAA...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCCACTTGCATATACATaGTCACAGACCATCTTATTG +
Preference number: 5 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPPLAYT*SQTILL
Trigger: CAATAAGATGGTCTGTGACAATGTATATGCAAGTGG...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CATAACAAATGGAAAAAGTTTGGCAGTCAAGAACTGTTGATTGAAAGACGGTTGAAACTGAGACTCAGTTaGGAGATTAGACCACATTCT +
Preference number: 5 (lower is better)
Translates to: HNKWKKFGSQELLIERRLKLRLS*EIRPHS
Trigger: AGAATGTGGTCTAATCTCCAAACTGAGTCTCAGTTT...CAACCGTCTTTCAATCAACAGTTCTTGACTGCCAAACTTTTTCCATTTGTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATGATAGTAACCAGAAGTaGACTGATGGTTCCTTACCT +
Preference number: 5 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHDSNQK*TDGSLP
Trigger: AGGTAAGGAACCATCAGTCAACTTCTGGTTACTATC...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS TCA 90 bp TTCTGCAAGTTGAAGGATATAACAAACCTCAACCAAGGTCTTAAGTaGCGTCCTCTTTGTGGCATTTTGGTTGAGAATAAAAATTCTGTT +
Preference number: 5 (lower is better)
Translates to: FCKLKDITNLNQGLK*RPLCGILVENKNSV
Trigger: AACAGAATTTTTATTCTCAACCAAAATGCCACAAAGAGGACGTCACTTAAGACCTTGGTTGAGGTTTGTTATATCCTTCAACTTGCAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS TCA 90 bp ATGGCATTTACTGAGTACTTTACGTGTTCCATTTGCCTTGAATGTTaGTATACTTTACTCCTTACTTCTTTCAGGTATCTGCTCACCTAT +
Preference number: 5 (lower is better)
Translates to: MAFTEYFTCSICLEC*YTLLLTSFRYLLTY
Trigger: ATAGGTGAGCAGATACCTGAAAGAAGTAAGGAGTAAAGTATATCAACATTCAAGGCAAATGGAACACGTAAAGTACTCAGTAAATGCCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS-3UTR CAA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTAATTCTCCATACAATTaGCCCTTTTTGTGTTCCAGT +
Preference number: 5 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPNSPYN*PFLCSS
Trigger: ACTGGAACACAAAAAGGGCAAATTGTATGGAGAATT...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCCACTTGCATATACATaGTCACAGACCATCTTATTG +
Preference number: 5 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHPLAYT*SQTILL
Trigger: CAATAAGATGGTCTGTGACAATGTATATGCAAGTGG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATAATGTCCCTTCACCTTaGGTACATTCAGTGCAAAAT +
Preference number: 5 (lower is better)
Translates to: IRPESLVIWVHSPEENIYNVPSP*VHSVQN
Trigger: ATTTTGCACTGAATGTACCAAAGGTGAAGGGACATT...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp TTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTCATCATCCTGTAAAGTATTaGATGGATGGAAGAGAGTCT +
Preference number: 5 (lower is better)
Translates to: LHIHCHRPSYCKSVKVPHHPVKY*MDGRES
Trigger: AGACTCTCTTCCATCCATCAAATACTTTACAGGATG...ATGAGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644421.1
ENST00000644978.2
ENST00000647236.1
CDS-3UTR CAA 90 bp CACTTGCATATACATTGTCACAGACCATCTTATTGCAAATCTGTAAAGGTACCTAAAGTGTACTGTTATTaGGGAAAAAGTTGGATGCCT +
Preference number: 5 (lower is better)
Translates to: HLHIHCHRPSYCKSVKVPKVYCY*GKSWMP
Trigger: AGGCATCCAACTTTTTCCCAAATAACAGTACACTTT...AGGTACCTTTACAGATTTGCAATAAGATGGTCTGTGACAATGTATATGCAAGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS-3UTR CAA 90 bp ATAAGACCAGAAAGCCTAGTTATCTGGGTTCACAGTCCAGAAGAAAATATTTATTTCAAAATCTTTGAGTaGCTCCTTCACAGATCAGCT +
Preference number: 5 (lower is better)
Translates to: IRPESLVIWVHSPEENIYFKIFE*LLHRSA
Trigger: AGCTGATCTGTGAAGGAGCAACTCAAAGATTTTGAA...ATAAATATTTTCTTCTGGACTGTGAACCCAGATAACTAGGCTTTCTGGTCTTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260983.8
ENST00000644978.2
CDS TCA 90 bp CCAAGATACGTGACACGAAGAGTCCCCAGACATAAATCATCCTCTTaGATTCTTTACAAGTTGTCTATAATTTTAAGACTAAGGAATAAC +
Preference number: 5 (lower is better)
Translates to: PRYVTRRVPRHKSSS*ILYKLSIILRLRNN
Trigger: GTTATTCCTTAGTCTTAAAATTATAGACAACTTGTAAAGAATTCAAGAGGATGATTTATGTCTGGGGACTCTTCGTGTCACGTATCTTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642318.1
CDS CCA 72 bp TGCCCGCACCGCCCTGCGGGACGCTGGGCTGGGAGCTaGCGGCACGTCGGGGACCGGTGGAAGGGAGGCGGG +
Preference number: 6 (lower is better)
Translates to: CPHRPAGRWAGS*RHVGDRWKGGG
Trigger: CCCGCCTCCCTTCCACCGGTCCCCGACGTGCCGCCAGCTCCCAGCCCAGCGTCCCGCAGGGCGGTGCGGGCA
79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS GCA 72 bp GCCGGCGCCCTTCCCGCTAGACGCTTCGGCGGCATCTaGCCGCACCGCCCTGCGGGACGCTGGGCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: AGALPARRFGGI*PHRPAGRWAGS
Trigger: GCTCCCAGCCCAGCGTCCCGCAGGGCGGTGCGGGCAGATGCCGCCGAAGCGTCTAGCGGGAAGGGCGCCGGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS CCA 72 bp CGGCATCTGCCCGCACCGCCCTGCGGGACGCTGGGCTaGGAGCTGGCGGCACGTCGGGGACCGGTGGAAGGG +
Preference number: 6 (lower is better)
Translates to: RHLPAPPCGTLG*ELAARRGPVEG
Trigger: CCCTTCCACCGGTCCCCGACGTGCCGCCAGCTCCCAGCCCAGCGTCCCGCAGGGCGGTGCGGGCAGATGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS CCA 72 bp TTCGGCGGCATCTGCCCGCACCGCCCTGCGGGACGCTaGGCTGGGAGCTGGCGGCACGTCGGGGACCGGTGG +
Preference number: 6 (lower is better)
Translates to: FGGICPHRPAGR*AGSWRHVGDRW
Trigger: CCACCGGTCCCCGACGTGCCGCCAGCTCCCAGCCCAGCGTCCCGCAGGGCGGTGCGGGCAGATGCCGCCGAA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS CAA 72 bp CGGGCTGAACTAGCCATCCCGTCTGCTTCTCTGGGATaGGCTGCCTACAAAGCTCCAGCCGCGCCGGCGCCC +
Preference number: 6 (lower is better)
Translates to: RAELAIPSASLG*AAYKAPAAPAP
Trigger: GGGCGCCGGCGCGGCTGGAGCTTTGTAGGCAGCCAATCCCAGAGAAGCAGACGGGATGGCTAGTTCAGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000644978.2
ENST00000645770.1
CDS CCA 72 bp CGCTGTTGGCCCGCTGCAGGGTCATGTTCTCTGGCATaGAGCTCTGGGCGGCAAGGCTCTGGAGGTTCTCTG +
Preference number: 6 (lower is better)
Translates to: RCWPAAGSCSLA*SSGRQGSGGSL
Trigger: CAGAGAACCTCCAGAGCCTTGCCGCCCAGAGCTCCATGCCAGAGAACATGACCCTGCAGCGGGCCAACAGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 72 bp GGTGTCGCTGTTGGCCCGCTGCAGGGTCATGTTCTCTaGCATGGAGCTCTGGGCGGCAAGGCTCTGGAGGTT +
Preference number: 6 (lower is better)
Translates to: GVAVGPLQGHVL*HGALGGKALEV
Trigger: AACCTCCAGAGCCTTGCCGCCCAGAGCTCCATGCCAGAGAACATGACCCTGCAGCGGGCCAACAGCGACACC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CAA 90 bp GTTAAGCTGGAGCGGCTCTCAGAAGTCACCAGGTCGGTGTCGCTGTaGGCCCGCTGCAGGGTCATGTTCTCTGGCATGGAGCTCTGGGCG +
Preference number: 6 (lower is better)
Translates to: VKLERLSEVTRSVSL*ARCRVMFSGMELWA
Trigger: CGCCCAGAGCTCCATGCCAGAGAACATGACCCTGCAGCGGGCCAACAGCGACACCGACCTGGTGACTTCTGAGAGCCGCTCCAGCTTAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS GCA 72 bp TCAGAAGTCACCAGGTCGGTGTCGCTGTTGGCCCGCTaGAGGGTCATGTTCTCTGGCATGGAGCTCTGGGCG +
Preference number: 6 (lower is better)
Translates to: SEVTRSVSLLAR*RVMFSGMELWA
Trigger: CGCCCAGAGCTCCATGCCAGAGAACATGACCCTGCAGCGGGCCAACAGCGACACCGACCTGGTGACTTCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 72 bp GCCCGCTGCAGGGTCATGTTCTCTGGCATGGAGCTCTaGGCGGCAAGGCTCTGGAGGTTCTCTGGGCTCAAT +
Preference number: 6 (lower is better)
Translates to: ARCRVMFSGMEL*AARLWRFSGLN
Trigger: ATTGAGCCCAGAGAACCTCCAGAGCCTTGCCGCCCAGAGCTCCATGCCAGAGAACATGACCCTGCAGCGGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 72 bp AGCGGCTCTCAGAAGTCACCAGGTCGGTGTCGCTGTTaGCCCGCTGCAGGGTCATGTTCTCTGGCATGGAGC +
Preference number: 6 (lower is better)
Translates to: SGSQKSPGRCRC*PAAGSCSLAWS
Trigger: GCTCCATGCCAGAGAACATGACCCTGCAGCGGGCCAACAGCGACACCGACCTGGTGACTTCTGAGAGCCGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 72 bp CCTCAGTTTGGCTTCGAAATCCCGCTTGTAAGGGGCTaGAGCCCGGGCATTGGCACGCTGGGTACCTGCAGC +
Preference number: 6 (lower is better)
Translates to: PQFGFEIPLVRG*SPGIGTLGTCS
Trigger: GCTGCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAGCCCCTTACAAGCGGGATTTCGAAGCCAAACTGAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS CAA 72 bp GAGCGGCTCTCAGAAGTCACCAGGTCGGTGTCGCTGTaGGCCCGCTGCAGGGTCATGTTCTCTGGCATGGAG +
Preference number: 6 (lower is better)
Translates to: ERLSEVTRSVSL*ARCRVMFSGME
Trigger: CTCCATGCCAGAGAACATGACCCTGCAGCGGGCCAACAGCGACACCGACCTGGTGACTTCTGAGAGCCGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CAA 72 bp CGGGCTGAACTAGCCATCCCGTCTGCTTCTCTGGGATaGGCTGCCTACAAAGCTGGGCTTTGCGCCCGTCGC +
Preference number: 6 (lower is better)
Translates to: RAELAIPSASLG*AAYKAGLCARR
Trigger: GCGACGGGCGCAAAGCCCAGCTTTGTAGGCAGCCAATCCCAGAGAAGCAGACGGGATGGCTAGTTCAGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644030.1
CDS CCA 72 bp GCCCCAGCGTGTACTCGTACATGCTGGCAGTTAAGCTaGAGCGGCTCTCAGAAGTCACCAGGTCGGTGTCGC +
Preference number: 6 (lower is better)
Translates to: APACTRTCWQLS*SGSQKSPGRCR
Trigger: GCGACACCGACCTGGTGACTTCTGAGAGCCGCTCCAGCTTAACTGCCAGCATGTACGAGTACACGCTGGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 72 bp CATGGAGCTCTGGGCGGCAAGGCTCTGGAGGTTCTCTaGGCTCAATGTGTACCGCATCTGGGGATTTCGACG +
Preference number: 6 (lower is better)
Translates to: HGALGGKALEVL*AQCVPHLGIST
Trigger: CGTCGAAATCCCCAGATGCGGTACACATTGAGCCCAGAGAACCTCCAGAGCCTTGCCGCCCAGAGCTCCATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 72 bp CGAAATCCCGCTTGTAAGGGGCTGGAGCCCGGGCATTaGCACGCTGGGTACCTGCAGCAAACCACAAAGAGA +
Preference number: 6 (lower is better)
Translates to: RNPACKGLEPGH*HAGYLQQTTKR
Trigger: TCTCTTTGTGGTTTGCTGCAGGTACCCAGCGTGCCAATGCCCGGGCTCCAGCCCCTTACAAGCGGGATTTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS CCA 72 bp AGGTCCTCACTTGGTGGGAGAGCCTCGTCCACCCTCTaGTACCGGCTAACATCCTGGCGCACTGAAGGTAGT +
Preference number: 6 (lower is better)
Translates to: RSSLGGRASSTL*YRLTSWRTEGS
Trigger: ACTACCTTCAGTGCGCCAGGATGTTAGCCGGTACCAGAGGGTGGACGAGGCTCTCCCACCAAGTGAGGACCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS CAA 72 bp CGGGCTGAACTAGCCATCCCGTCTGCTTCTCTGGGATaGGCTGCCTACAAAGCTCTGCAGTCTCGCGTCCTC +
Preference number: 6 (lower is better)
Translates to: RAELAIPSASLG*AAYKALQSRVL
Trigger: GAGGACGCGAGACTGCAGAGCTTTGTAGGCAGCCAATCCCAGAGAAGCAGACGGGATGGCTAGTTCAGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260983.8
CDS GCA 72 bp CGCATCTGGGGATTTCGACGCCTCACAAAAAGCAGGTaGTCCCGGGCTGAACTAGCCATCCCGTCTGCTTCT +
Preference number: 6 (lower is better)
Translates to: RIWGFRRLTKSR*SRAELAIPSAS
Trigger: AGAAGCAGACGGGATGGCTAGTTCAGCCCGGGAGCACCTGCTTTTTGTGAGGCGTCGAAATCCCCAGATGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 72 bp ATGTTCTCTGGCATGGAGCTCTGGGCGGCAAGGCTCTaGAGGTTCTCTGGGCTCAATGTGTACCGCATCTGG +
Preference number: 6 (lower is better)
Translates to: MFSGMELWAARL*RFSGLNVYRIW
Trigger: CCAGATGCGGTACACATTGAGCCCAGAGAACCTCCAGAGCCTTGCCGCCCAGAGCTCCATGCCAGAGAACAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 72 bp GGTTCTGGGCTTGCCCCAGCGTGTACTCGTACATGCTaGCAGTTAAGCTGGAGCGGCTCTCAGAAGTCACCA +
Preference number: 6 (lower is better)
Translates to: GSGLAPACTRTC*QLSWSGSQKSP
Trigger: TGGTGACTTCTGAGAGCCGCTCCAGCTTAACTGCCAGCATGTACGAGTACACGCTGGGGCAAGCCCAGAACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 72 bp GCCAAGTGTCGAAGCCACAAGCAGCCCACAGGCATTTaGCACTCCCTGAGGCATCTCCCTCGTGTTACCTTG +
Preference number: 6 (lower is better)
Translates to: AKCRSHKQPTGI*HSLRHLPRVTL
Trigger: CAAGGTAACACGAGGGAGATGCCTCAGGGAGTGCCAAATGCCTGTGGGCTGCTTGTGGCTTCGACACTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CAA 72 bp GGCCAAGTGTCGAAGCCACAAGCAGCCCACAGGCATTaGGCACTCCCTGAGGCATCTCCCTCGTGTTACCTT +
Preference number: 6 (lower is better)
Translates to: GQVSKPQAAHRH*ALPEASPSCYL
Trigger: AAGGTAACACGAGGGAGATGCCTCAGGGAGTGCCAAATGCCTGTGGGCTGCTTGTGGCTTCGACACTTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CAA 90 bp AGGTGCTCCCGGGCTGAACTAGCCATCCCGTCTGCTTCTCTGGGATaGGCTGCCTACAAAGCTGTAGTCCTAGCTATGAGGAAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: RCSRAELAIPSASLG*AAYKAVVLAMRKAE
Trigger: CTCAGCCTTCCTCATAGCTAGGACTACAGCTTTGTAGGCAGCCAATCCCAGAGAAGCAGACGGGATGGCTAGTTCAGCCCGGGAGCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427457.2
CDS TCA 72 bp ATTTCGACGCCTCACAAAAAGCAGGTGCTCCCGGGCTaGACTAGCCATCCCGTCTGCTTCTCTGGGATTGGC +
Preference number: 6 (lower is better)
Translates to: ISTPHKKQVLPG*TSHPVCFSGIG
Trigger: GCCAATCCCAGAGAAGCAGACGGGATGGCTAGTTCAGCCCGGGAGCACCTGCTTTTTGTGAGGCGTCGAAAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS TCA 72 bp CGTGGTCAGCTGGGAGCCTTCTGCCAAGGTTGTAGCTaGGCATTTGATCACCGATGGCTTGTCGCTCCAGCA +
Preference number: 6 (lower is better)
Translates to: RGQLGAFCQGCS*AFDHRWLVAPA
Trigger: TGCTGGAGCGACAAGCCATCGGTGATCAAATGCTCAGCTACAACCTTGGCAGAAGGCTCCCAGCTGACCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS TCA 72 bp TCCCTGAGGCATCTCCCTCGTGTTACCTTGCCCTGGTaGTCATGTTTCATTTCCCATCCCCGCGGCAGCTCT +
Preference number: 6 (lower is better)
Translates to: SLRHLPRVTLPW*SCFISHPRGSS
Trigger: AGAGCTGCCGCGGGGATGGGAAATGAAACATGATCACCAGGGCAAGGTAACACGAGGGAGATGCCTCAGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS TCA 72 bp GCGACAAGAGTGGGACTCCGTCTCCCCCTACCTGAGTaGGTGATTCCTGGTAAGATCAGGTTGACGCTCCTG +
Preference number: 6 (lower is better)
Translates to: ATRVGLRLPLPE*VIPGKIRLTLL
Trigger: CAGGAGCGTCAACCTGATCTTACCAGGAATCACTCACTCAGGTAGGGGGAGACGGAGTCCCACTCTTGTCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000647402.1
CDS CCA 72 bp AGGCAACCACAGCGACGTGGAGAAACATCCGCCTTGTaGCCACAGCCTATGTTCCACAGGCCACTTCTCTGT +
Preference number: 6 (lower is better)
Translates to: RQPQRRGETSAL*PQPMFHRPLLC
Trigger: ACAGAGAAGTGGCCTGTGGAACATAGGCTGTGGCCACAAGGCGGATGTTTCTCCACGTCGCTGTGGTTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS CCA 72 bp GGAGCAGCCAGAGCTGAACTGAAGTCAAGGCGGGTCTaGAGTTCTAAGGTGGCTGTGAAAGCTCTGCAGGTC +
Preference number: 6 (lower is better)
Translates to: GAARAELKSRRV*SSKVAVKALQV
Trigger: GACCTGCAGAGCTTTCACAGCCACCTTAGAACTCCAGACCCGCCTTGACTTCAGTTCAGCTCTGGCTGCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS CAA 72 bp TTCAGGCAACCACAGCGACGTGGAGAAACATCCGCCTaGTGGCCACAGCCTATGTTCCACAGGCCACTTCTC +
Preference number: 6 (lower is better)
Translates to: FRQPQRRGETSA*WPQPMFHRPLL
Trigger: GAGAAGTGGCCTGTGGAACATAGGCTGTGGCCACAAGGCGGATGTTTCTCCACGTCGCTGTGGTTGCCTGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS CAA 72 bp CGGGCTGAACTAGCCATCCCGTCTGCTTCTCTGGGATaGGCTGCCTACAAAGAGACACAGGGGCCACAGTTT +
Preference number: 6 (lower is better)
Translates to: RAELAIPSASLG*AAYKETQGPQF
Trigger: AAACTGTGGCCCCTGTGTCTCTTTGTAGGCAGCCAATCCCAGAGAAGCAGACGGGATGGCTAGTTCAGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644256.1
CDS CAA 90 bp ACAGAAGGTGGAATGTTTCACCTCACAAAGAGCCTTGGCCCTCACTaGAAGGGTAGGGCCAAGTGTCGAAGCCACAAGCAGCCCACAGGC +
Preference number: 6 (lower is better)
Translates to: TEGGMFHLTKSLGPH*KGRAKCRSHKQPTG
Trigger: GCCTGTGGGCTGCTTGTGGCTTCGACACTTGGCCCTACCCTTCAAGTGAGGGCCAAGGCTCTTTGTGAGGTGAAACATTCCACCTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 72 bp TTGGTGGTGTTACTGATGATAGTAGACCGTCTCTCCTaGCCGTGGTGGGCACAGGTGGGGAAACTGCTCTTC +
Preference number: 6 (lower is better)
Translates to: LVVLLMIVDRLS*PWWAQVGKLLF
Trigger: GAAGAGCAGTTTCCCCACCTGTGCCCACCACGGGCAGGAGAGACGGTCTACTATCATCAGTAACACCACCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260983.8
ENST00000642531.1
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
ENST00000647236.1
ENST00000647314.1
CDS CCA 72 bp CTCTGGAGGTTCTCTGGGCTCAATGTGTACCGCATCTaGGGATTTCGACGCCTCACAAAAAGCAGGTGCTCC +
Preference number: 6 (lower is better)
Translates to: LWRFSGLNVYRI*GFRRLTKSRCS
Trigger: GGAGCACCTGCTTTTTGTGAGGCGTCGAAATCCCCAGATGCGGTACACATTGAGCCCAGAGAACCTCCAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 72 bp TTACTGATGATAGTAGACCGTCTCTCCTGCCCGTGGTaGGCACAGGTGGGGAAACTGCTCTTCTTTCCTGGC +
Preference number: 6 (lower is better)
Translates to: LLMIVDRLSCPW*AQVGKLLFFPG
Trigger: GCCAGGAAAGAAGAGCAGTTTCCCCACCTGTGCCCACCACGGGCAGGAGAGACGGTCTACTATCATCAGTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260983.8
ENST00000642531.1
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
ENST00000647236.1
ENST00000647314.1
CDS CAA 72 bp CGGGCTGAACTAGCCATCCCGTCTGCTTCTCTGGGATaGGCTGCCTACAAAGCTGTAGTCCTAGCTATGAGG +
Preference number: 6 (lower is better)
Translates to: RAELAIPSASLG*AAYKAVVLAMR
Trigger: CCTCATAGCTAGGACTACAGCTTTGTAGGCAGCCAATCCCAGAGAAGCAGACGGGATGGCTAGTTCAGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427457.2
CDS TCA 72 bp GAATGTTTCACCTCACAAAGAGCCTTGGCCCTCACTTaGAGGGTAGGGCCAAGTGTCGAAGCCACAAGCAGC +
Preference number: 6 (lower is better)
Translates to: ECFTSQRALALT*RVGPSVEATSS
Trigger: GCTGCTTGTGGCTTCGACACTTGGCCCTACCCTTCAAGTGAGGGCCAAGGCTCTTTGTGAGGTGAAACATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 72 bp GTGTTACTGATGATAGTAGACCGTCTCTCCTGCCCGTaGTGGGCACAGGTGGGGAAACTGCTCTTCTTTCCT +
Preference number: 6 (lower is better)
Translates to: VLLMIVDRLSCP*WAQVGKLLFFP
Trigger: AGGAAAGAAGAGCAGTTTCCCCACCTGTGCCCACCACGGGCAGGAGAGACGGTCTACTATCATCAGTAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000260983.8
ENST00000642531.1
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
ENST00000647236.1
ENST00000647314.1
CDS CAA 72 bp GGAATGTTTCACCTCACAAAGAGCCTTGGCCCTCACTaGAAGGGTAGGGCCAAGTGTCGAAGCCACAAGCAG +
Preference number: 6 (lower is better)
Translates to: GMFHLTKSLGPH*KGRAKCRSHKQ
Trigger: CTGCTTGTGGCTTCGACACTTGGCCCTACCCTTCAAGTGAGGGCCAAGGCTCTTTGTGAGGTGAAACATTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 72 bp GAGAAGAGCACAGACTCTGGAGCTGGACTGCCTGGGTaGAAATCCAATTCCACCACTTACGAATTGTGGGAC +
Preference number: 6 (lower is better)
Translates to: EKSTDSGAGLPG*KSNSTTYELWD
Trigger: GTCCCACAATTCGTAAGTGGTGGAATTGGATTTGCACCCAGGCAGTCCAGCTCCAGAGTCTGTGCTCTTCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 72 bp CACTTTAAACTGGAGGTACCCACTCACGTGGTCAGCTaGGAGCCTTCTGCCAAGGTTGTAGCTGAGCATTTG +
Preference number: 6 (lower is better)
Translates to: HFKLEVPTHVVS*EPSAKVVAEHL
Trigger: CAAATGCTCAGCTACAACCTTGGCAGAAGGCTCCCAGCTGACCACGTGAGTGGGTACCTCCAGTTTAAAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000260983.8
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 72 bp CAGAAGGATTTCCTGTTTCAGGCAACCACAGCGACGTaGAGAAACATCCGCCTTGTGGCCACAGCCTATGTT +
Preference number: 6 (lower is better)
Translates to: QKDFLFQATTAT*RNIRLVATAYV
Trigger: AACATAGGCTGTGGCCACAAGGCGGATGTTTCTCCACGTCGCTGTGGTTGCCTGAAACAGGAAATCCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS CAA 90 bp ATTTCCTGTTTCAGGCAACCACAGCGACGTGGAGAAACATCCGCCTaGTGGCCACAGCCTATGTTCCACAGGCCACTTCTCTGTTCTACT +
Preference number: 6 (lower is better)
Translates to: ISCFRQPQRRGETSA*WPQPMFHRPLLCST
Trigger: AGTAGAACAGAGAAGTGGCCTGTGGAACATAGGCTGTGGCCACAAGGCGGATGTTTCTCCACGTCGCTGTGGTTGCCTGAAACAGGAAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS TCA 72 bp TGCCTACAAAGCTGTAGTCCTAGCTATGAGGAAGGCTaGGGTGGAGAATCACTTGAGTCCAGGAGCTCAAGG +
Preference number: 6 (lower is better)
Translates to: CLQSCSPSYEEG*GGESLESRSSR
Trigger: CCTTGAGCTCCTGGACTCAAGTGATTCTCCACCTCAGCCTTCCTCATAGCTAGGACTACAGCTTTGTAGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000427457.2
CDS CCA 72 bp ACCTCCTCTTTAATGTCCCAGAAGATAATGAGGTTCTaGGCTTGCCCCAGCGTGTACTCGTACATGCTGGCA +
Preference number: 6 (lower is better)
Translates to: TSSLMSQKIMRF*ACPSVYSYMLA
Trigger: TGCCAGCATGTACGAGTACACGCTGGGGCAAGCCCAGAACCTCATTATCTTCTGGGACATTAAAGAGGAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000260983.8
ENST00000427457.2
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CCA 72 bp CAATACTTGCAGAGCATAATGTCATGGTTAAGAGCATaGTTCCTGGAACCAGCCTGGCTGGCCTACAGCGTG +
Preference number: 6 (lower is better)
Translates to: QYLQSIMSWLRA*FLEPAWLAYSV
Trigger: CACGCTGTAGGCCAGCCAGGCTGGTTCCAGGAACCATGCTCTTAACCATGACATTATGCTCTGCAAGTATTG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CAA 72 bp GCTCCCTCCACGACTTCAGAATGGCACAGTCACTGTTaGTGGTCACAAACAACCTGCTGTCCAGGTTTCACT +
Preference number: 6 (lower is better)
Translates to: APSTTSEWHSHC*WSQTTCCPGFT
Trigger: AGTGAAACCTGGACAGCAGGTTGTTTGTGACCACAAACAGTGACTGTGCCATTCTGAAGTCGTGGAGGGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS TCA 72 bp TATGTACCTCAGCAACATAACAAGGTCTGCATCGCTTaGAAGGCGCACCAATCCTGGAGTCCCTTCAGTTCG +
Preference number: 6 (lower is better)
Translates to: YVPQQHNKVCIA*KAHQSWSPFSS
Trigger: CGAACTGAAGGGACTCCAGGATTGGTGCGCCTTTCAAGCGATGCAGACCTTGTTATGTTGCTGAGGTACATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000462290.1
CDS TCA 72 bp ATGTGGATAAAAATAGCACCCATCTCCAGGCTGCTGTaGGCACTAAATGAACTAGTGTCTGGCCCAGGGGCA +
Preference number: 6 (lower is better)
Translates to: MWIKIAPISRLL*ALNELVSGPGA
Trigger: TGCCCCTGGGCCAGACACTAGTTCATTTAGTGCTCACAGCAGCCTGGAGATGGGTGCTATTTTTATCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 72 bp TGCCTATTCATAAGACAGGAGACAGGACTCCTAACATaGAGCCCAAAGCAGAGTAGCCAAACAGAGACCGAG +
Preference number: 6 (lower is better)
Translates to: CLFIRQETGLLT*SPKQSSQTETE
Trigger: CTCGGTCTCTGTTTGGCTACTCTGCTTTGGGCTGCATGTTAGGAGTCCTGTCTCCTGTCTTATGAATAGGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 72 bp TGCTTGAGCCCAGGAGTTCTGGACTACAGTGTGCTATaGCAATCAGGTGTCCACACTAAGTTCCCCAACAAT +
Preference number: 6 (lower is better)
Translates to: CLSPGVLDYSVL*QSGVHTKFPNN
Trigger: ATTGTTGGGGAACTTAGTGTGGACACCTGATTGGCATAGCACACTGTAGTCCAGAACTCCTGGGCTCAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 72 bp GTAAGGCAGGAGCAAACAGCCCAGGTCAGACTACCCTaGAGTGATCAAGAACAACATGGACAGCAAAGAACT +
Preference number: 6 (lower is better)
Translates to: VRQEQTAQVRLP*SDQEQHGQQRT
Trigger: AGTTCTTTGCTGTCCATGTTGTTCTTGATCACTGCAGGGTAGTCTGACCTGGGCTGTTTGCTCCTGCCTTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 72 bp AGTCCTTACTTGGACCATCTGTGCCCTTCCATCCAATaGAATATTTACAGGCACTGGGCTCTCAGGCTGTTG +
Preference number: 6 (lower is better)
Translates to: SPYLDHLCPSIQ*NIYRHWALRLL
Trigger: CAACAGCCTGAGAGCCCAGTGCCTGTAAATATTCCATTGGATGGAAGGGCACAGATGGTCCAAGTAAGGACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 72 bp CTTTCTTTCAGCATAATGGTGCCAGAGAAGAGTCATTaGCCTAGCACGTCCCGGACTACACCTGCTATGTCA +
Preference number: 6 (lower is better)
Translates to: LSFSIMVPEKSH*PSTSRTTPAMS
Trigger: TGACATAGCAGGTGTAGTCCGGGACGTGCTAGGCCAATGACTCTTCTCTGGCACCATTATGCTGAAAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS CAA 72 bp ACTAAGTTCCCCAACAATATGGTGAACTCCGAGGAGTaGGAGATCACCAGGTTGCCTAAGGTAGGAGGAACC +
Preference number: 6 (lower is better)
Translates to: TKFPNNMVNSEE*EITRLPKVGGT
Trigger: GGTTCCTCCTACCTTAGGCAACCTGGTGATCTCCAACTCCTCGGAGTTCACCATATTGTTGGGGAACTTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CAA 90 bp CAGTCACTGTTTGTGGTCACAAACAACCTGCTGTCCAGGTTTCACTaGAACAGAAGGTGGAATGTTTCACCTCACAAAGAGCCTTGGCCC +
Preference number: 6 (lower is better)
Translates to: QSLFVVTNNLLSRFH*NRRWNVSPHKEPWP
Trigger: GGGCCAAGGCTCTTTGTGAGGTGAAACATTCCACCTTCTGTTCAAGTGAAACCTGGACAGCAGGTTGTTTGTGACCACAAACAGTGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CAA 90 bp GACTACACCTGCTATGTCAAGTGGCAACCCCCAGATTCCTTCCGCTaGAAGACCATGTATCCATCTTTTGAGACTCATGGGAATGGGTCT +
Preference number: 6 (lower is better)
Translates to: DYTCYVKWQPPDSFR*KTMYPSFETHGNGS
Trigger: AGACCCATTCCCATGAGTCTCAAAAGATGGATACATGGTCTTCAAGCGGAAGGAATCTGGGGGTTGCCACTTGACATAGCAGGTGTAGTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS TCA 72 bp AATCAGGTGTCCACACTAAGTTCCCCAACAATATGGTaGACTCCGAGGAGTTGGAGATCACCAGGTTGCCTA +
Preference number: 6 (lower is better)
Translates to: NQVSTLSSPTIW*TPRSWRSPGCL
Trigger: TAGGCAACCTGGTGATCTCCAACTCCTCGGAGTTCACCATATTGTTGGGGAACTTAGTGTGGACACCTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS TCA 72 bp TTCTTCTCATTGCGTGGGAGGCGAGAATTCTGCCACTaGACCAGCAGTGCTTCCTCATATTCTTCTCATTGC +
Preference number: 6 (lower is better)
Translates to: FFSLRGRREFCH*TSSASSYSSHC
Trigger: GCAATGAGAAGAATATGAGGAAGCACTGCTGGTTCAGTGGCAGAATTCTCGCCTCCCACGCAATGAGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642884.1
CDS TCA 72 bp TCATGGGAATGGGTCTGCCTGTCACCTTTCACCGTTTaGTTAAGGTGGGCCCTTTTAACTAACAGGTCCTCA +
Preference number: 6 (lower is better)
Translates to: SWEWVCLSPFTV*LRWALLTNRSS
Trigger: TGAGGACCTGTTAGTTAAAAGGGCCCACCTTAATCAAACGGTGAAAGGTGACAGGCAGACCCATTCCCATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS TCA 72 bp TCCGGCAGGTCTCTAACAAGAGGCTCCTGTCCAGTATaGATGACACTAAAAGCCACTCCTGCCTTTCATCAA +
Preference number: 6 (lower is better)
Translates to: SGRSLTRGSCPV*MTLKATPAFHQ
Trigger: TTGATGAAAGGCAGGAGTGGCTTTTAGTGTCATTCATACTGGACAGGAGCCTCTTGTTAGAGACCTGCCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000647236.1
CDS CCA 72 bp AACAACCTGCTGTCCAGGTTTCACTTGAACAGAAGGTaGAATGTTTCACCTCACAAAGAGCCTTGGCCCTCA +
Preference number: 6 (lower is better)
Translates to: NNLLSRFHLNRR*NVSPHKEPWPS
Trigger: TGAGGGCCAAGGCTCTTTGTGAGGTGAAACATTCCACCTTCTGTTCAAGTGAAACCTGGACAGCAGGTTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 72 bp TTGCTTACCTATCAAGCAAAGATTCTTCTCATTGCGTaGGAGGCGAGAATTCTGCCACTGAACCAGCAGTGC +
Preference number: 6 (lower is better)
Translates to: LLTYQAKILLIA*EARILPLNQQC
Trigger: GCACTGCTGGTTCAGTGGCAGAATTCTCGCCTCCCACGCAATGAGAAGAATCTTTGCTTGATAGGTAAGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642884.1
CDS CAA 72 bp GGGCCCAGGCTCAATTCTCCATACAATTTGCCCTTTTaGTGTTCCAGTCACACCCCTGTTCTTAGAATCCCA +
Preference number: 6 (lower is better)
Translates to: GPRLNSPYNLPF*CSSHTPVLRIP
Trigger: TGGGATTCTAAGAACAGGGGTGTGACTGGAACACAAAAAGGGCAAATTGTATGGAGAATTGAGCCTGGGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260983.8
ENST00000642531.1
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
ENST00000647236.1
ENST00000647314.1
CDS CAA 72 bp TGCTATGTCAAGTGGCAACCCCCAGATTCCTTCCGCTaGAAGACCATGTATCCATCTTTTGAGACTCATGGG +
Preference number: 6 (lower is better)
Translates to: CYVKWQPPDSFR*KTMYPSFETHG
Trigger: CCCATGAGTCTCAAAAGATGGATACATGGTCTTCAAGCGGAAGGAATCTGGGGGTTGCCACTTGACATAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS CAA 72 bp GCGCACCAATCCTGGAGTCCCTTCAGTTCGGATAAATaGGATCTTCTCCCTATTATGTGGCAGCTACTGTGT +
Preference number: 6 (lower is better)
Translates to: AHQSWSPFSSDK*DLLPIMWQLLC
Trigger: ACACAGTAGCTGCCACATAATAGGGAGAAGATCCAATTTATCCGAACTGAAGGGACTCCAGGATTGGTGCGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645468.1
CDS CAA 90 bp CTCCGGTTCCATGAAATAGGGCCCAGGCTCAATTCTCCATACAATTaGCCCTTTTTGTGTTCCAGTCACACCCCTGTTCTTAGAATCCCA +
Preference number: 6 (lower is better)
Translates to: LRFHEIGPRLNSPYN*PFLCSSHTPVLRIP
Trigger: TGGGATTCTAAGAACAGGGGTGTGACTGGAACACAAAAAGGGCAAATTGTATGGAGAATTGAGCCTGGGCCCTATTTCATGGAACCGGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000260983.8
ENST00000642531.1
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
ENST00000647236.1
ENST00000647314.1
CDS CAA 90 bp ATGTCCTCGTCATCGGAAGGGCTACCTAAGTCTCCATTCACAGAATaGACTCCAAGTATTGTGCCAACAGCTTCTGGAGAGGCATCTTCA +
Preference number: 6 (lower is better)
Translates to: MSSSSEGLPKSPFTE*TPSIVPTASGEASS
Trigger: TGAAGATGCCTCTCCAGAAGCTGTTGGCACAATACTTGGAGTCAATTCTGTGAATGGAGACTTAGGTAGCCCTTCCGATGACGAGGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000260983.8
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
CDS CAA 90 bp CTTGACGAGCACACTCATGGAAGAGTCATGGAAGGCGGGACATGTTaGTTTATGTTAGGTAGTAATGTTGGTAGGTGTGCTGCCTTCCCA +
Preference number: 6 (lower is better)
Translates to: LDEHTHGRVMEGGTC*FMLGSNVGRCAAFP
Trigger: TGGGAAGGCAGCACACCTACCAACATTACTACCTAACATAAACAAACATGTCCCGCCTTCCATGACTCTTCCATGAGTGTGCTCGTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS CAA 90 bp ATGTCCTCGTCATCGGAAGGGCTACCTAAGTCTCCATTCACAGAATaGACTCCAAGTATTGTGCCAACAGCTTCTGGAGAGGCATCTGAA +
Preference number: 6 (lower is better)
Translates to: MSSSSEGLPKSPFTE*TPSIVPTASGEASE
Trigger: TTCAGATGCCTCTCCAGAAGCTGTTGGCACAATACTTGGAGTCAATTCTGTGAATGGAGACTTAGGTAGCCCTTCCGATGACGAGGACAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644030.1
CDS CAA 90 bp CATGAAATAGGGCCCAGGCTCAATTCTCCATACAATTTGCCCTTTTaGTGTTCCAGTCACACCCCTGTTCTTAGAATCCCAGAAGTTGGC +
Preference number: 6 (lower is better)
Translates to: HEIGPRLNSPYNLPF*CSSHTPVLRIPEVG
Trigger: GCCAACTTCTGGGATTCTAAGAACAGGGGTGTGACTGGAACACAAAAAGGGCAAATTGTATGGAGAATTGAGCCTGGGCCCTATTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000260983.8
ENST00000642531.1
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
ENST00000647236.1
ENST00000647314.1
CDS CAA 90 bp TGCCTGGGTGCAAATCCAATTCCACCACTTACGAATTGTGGGACCTaGGTCAATTCACGTAATCATGCTGTGCCTCAGTTTCCTCTTCTA +
Preference number: 6 (lower is better)
Translates to: CLGANPIPPLTNCGT*VNSRNHAVPQFPLL
Trigger: TAGAAGAGGAAACTGAGGCACAGCATGATTACGTGAATTGACCAAGGTCCCACAATTCGTAAGTGGTGGAATTGGATTTGCACCCAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS TCA 72 bp AAACAGGATTCTAATGTAAAAGCCAGCAGCAGATTGTaGGGTCAGCTCTCTACCAGCCTACACTCAGGGTTC +
Preference number: 6 (lower is better)
Translates to: KQDSNVKASSRL*GQLSTSLHSGF
Trigger: GAACCCTGAGTGTAGGCTGGTAGAGAGCTGACCTCACAATCTGCTGCTGGCTTTTACATTAGAATCCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS TCA 72 bp ATCCTGCCAAGCCCTTGCTATCTTCATGATAATTGCTaGAGATATCCCTTCACCCTCCTTACTGGTGAGAGG +
Preference number: 6 (lower is better)
Translates to: ILPSPCYLHDNC*RYPFTLLTGER
Trigger: CCTCTCACCAGTAAGGAGGGTGAAGGGATATCTTCAGCAATTATCATGAAGATAGCAAGGGCTTGGCAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS TCA 72 bp CTGACGGAGAATACAACCACCAGAGCAGAATTCCACTaGTACAGCAAGAGAACAAATCCACTCAGACACCAC +
Preference number: 6 (lower is better)
Translates to: LTENTTTRAEFH*YSKRTNPLRHH
Trigger: GTGGTGTCTGAGTGGATTTGTTCTCTTGCTGTATCAGTGGAATTCTGCTCTGGTGGTTGTATTCTCCGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS TCA 72 bp AGATTCCTTCCGCTTGAAGACCATGTATCCATCTTTTaGGACTCATGGGAATGGGTCTGCCTGTCACCTTTC +
Preference number: 6 (lower is better)
Translates to: RFLPLEDHVSIF*DSWEWVCLSPF
Trigger: GAAAGGTGACAGGCAGACCCATTCCCATGAGTCTCAAAAGATGGATACATGGTCTTCAAGCGGAAGGAATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS CCA 72 bp TCAACAAACTCTGGTCCAACAATGAAGGGAGGCAGCTaGAGTTCTGGGGGAGGAAAAGTATTCTCATCCAAA +
Preference number: 6 (lower is better)
Translates to: STNSGPTMKGGS*SSGGGKVFSSK
Trigger: TTTGGATGAGAATACTTTTCCTCCCCCAGAACTCCAGCTGCCTCCCTTCATTGTTGGACCAGAGTTTGTTGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS CCA 72 bp AGGTTGGTTACTCAATACTTGCAGAGCATAATGTCATaGTTAAGAGCATGGTTCCTGGAACCAGCCTGGCTG +
Preference number: 6 (lower is better)
Translates to: RLVTQYLQSIMS*LRAWFLEPAWL
Trigger: CAGCCAGGCTGGTTCCAGGAACCATGCTCTTAACCATGACATTATGCTCTGCAAGTATTGAGTAACCAACCT
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 72 bp CGCACCAATCCTGGAGTCCCTTCAGTTCGGATAAATTaGATCTTCTCCCTATTATGTGGCAGCTACTGTGTA +
Preference number: 6 (lower is better)
Translates to: RTNPGVPSVRIN*IFSLLCGSYCV
Trigger: TACACAGTAGCTGCCACATAATAGGGAGAAGATCCAATTTATCCGAACTGAAGGGACTCCAGGATTGGTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645468.1
CDS TCA 72 bp GGCCTTATCTGTGACATCCTCCCCAACCACCCTCTATaGAATAACATTCTCCATTCCTGTCTTTCACTAGAC +
Preference number: 6 (lower is better)
Translates to: GLICDILPNHPL*NNILHSCLSLD
Trigger: GTCTAGTGAAAGACAGGAATGGAGAATGTTATTTCATAGAGGGTGGTTGGGGAGGATGTCACAGATAAGGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 72 bp TGCAGCAAACCACAAAGAGAGGACAATCTGGATTTGTaGCTCGTCCTTATGTTCATCACATCACCATGGACA +
Preference number: 6 (lower is better)
Translates to: CSKPQREDNLDL*LVLMFITSPWT
Trigger: TGTCCATGGTGATGTGATGAACATAAGGACGAGGCACAAATCCAGATTGTCCTCTCTTTGTGGTTTGCTGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS GCA 72 bp CTGGCAAGTTATGACTGGCAAGAAGGGACCAACCCCTaGCTTAACAAGTTAAATCTCAACACAGAGCAGAAA +
Preference number: 6 (lower is better)
Translates to: LASYDWQEGTNP*LNKLNLNTEQK
Trigger: TTTCTGCTCTGTGTTGAGATTTAACTTGTTAAGGCAGGGGTTGGTCCCTTCTTGCCAGTCATAACTTGCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 72 bp AACATTGCTTACCTATCAAGCAAAGATTCTTCTCATTaGGTGGGAGGCGAGAATTCTGCCACTGAACCAGCA +
Preference number: 6 (lower is better)
Translates to: NIAYLSSKDSSH*VGGENSATEPA
Trigger: TGCTGGTTCAGTGGCAGAATTCTCGCCTCCCACGCAATGAGAAGAATCTTTGCTTGATAGGTAAGCAATGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642884.1
CDS CCA 72 bp TTAAAACAGAGGAACCAAAGCATCAGCCTGTTGTCATaGTCACATATAAGATGGGTAAGTGGAGGGGGTGAG +
Preference number: 6 (lower is better)
Translates to: LKQRNQSISLLS*SHIRWVSGGGE
Trigger: CTCACCCCCTCCACTTACCCATCTTATATGTGACCATGACAACAGGCTGATGCTTTGGTTCCTCTGTTTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS CAA 72 bp CATGAAATAGGGCCCAGGCTCAATTCTCCATACAATTaGCCCTTTTTGTGTTCCAGTCACACCCCTGTTCTT +
Preference number: 6 (lower is better)
Translates to: HEIGPRLNSPYN*PFLCSSHTPVL
Trigger: AAGAACAGGGGTGTGACTGGAACACAAAAAGGGCAAATTGTATGGAGAATTGAGCCTGGGCCCTATTTCATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000260983.8
ENST00000642531.1
ENST00000644030.1
ENST00000644256.1
ENST00000644978.2
ENST00000645770.1
ENST00000647236.1
ENST00000647314.1
CDS TCA 72 bp TCTTGTTACCCTGCATCAGTAATAGCTGATTCAGTTTaGATCACACAACACGGCTATCCACACTCCTCAGGT +
Preference number: 6 (lower is better)
Translates to: SCYPASVIADSV*ITQHGYPHSSG
Trigger: ACCTGAGGAGTGTGGATAGCCGTGTTGTGTGATTCAAACTGAATCAGCTATTACTGATGCAGGGTAACAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000642884.1
CDS GCA 72 bp TGTCTCTGTGATGTCAGGCAAGTCACTGAACCATTCTaGACATGGAGCTGCTTATCTGTACATGGCAATAAT +
Preference number: 6 (lower is better)
Translates to: CLCDVRQVTEPF*TWSCLSVHGNN
Trigger: ATTATTGCCATGTACAGATAAGCAGCTCCATGTGCAGAATGGTTCAGTGACTTGCCTGACATCACAGAGACA
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 72 bp TATTATTTACCCCATGGGCAACACAGGATTTACAGCTaGCCTTTCTTTCAGCATAATGGTGCCAGAGAAGAG +
Preference number: 6 (lower is better)
Translates to: YYLPHGQHRIYS*PFFQHNGAREE
Trigger: CTCTTCTCTGGCACCATTATGCTGAAAGAAAGGGCAGCTGTAAATCCTGTGTTGCCCATGGGGTAAATAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS CCA 72 bp CGCCCATCTGACTCTAATTCAGTGTCATTTTACCTGTaGTCCAGGGACATAATCACAAGCCCAATTCTCTTT +
Preference number: 6 (lower is better)
Translates to: RPSDSNSVSFYL*SRDIITSPILF
Trigger: AAAGAGAATTGGGCTTGTGATTATGTCCCTGGACCACAGGTAAAATGACACTGAATTAGAGTCAGATGGGCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CCA 72 bp CAAATCCAATTCCACCACTTACGAATTGTGGGACCTTaGTCAATTCACGTAATCATGCTGTGCCTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: QIQFHHLRIVGP*SIHVIMLCLSF
Trigger: GAAACTGAGGCACAGCATGATTACGTGAATTGACCAAGGTCCCACAATTCGTAAGTGGTGGAATTGGATTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CAA 72 bp CACACTCATGGAAGAGTCATGGAAGGCGGGACATGTTaGTTTATGTTAGGTAGTAATGTTGGTAGGTGTGCT +
Preference number: 6 (lower is better)
Translates to: HTHGRVMEGGTC*FMLGSNVGRCA
Trigger: AGCACACCTACCAACATTACTACCTAACATAAACAAACATGTCCCGCCTTCCATGACTCTTCCATGAGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS CAA 72 bp GTTCCAGTCACACCCCTGTTCTTAGAATCCCAGAAGTaGGCTGGAGAATTCTCATCTCATATAATCCCAAAG +
Preference number: 6 (lower is better)
Translates to: VPVTPLFLESQK*AGEFSSHIIPK
Trigger: CTTTGGGATTATATGAGATGAGAATTCTCCAGCCAACTTCTGGGATTCTAAGAACAGGGGTGTGACTGGAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000642531.1
ENST00000647236.1
ENST00000647314.1
CDS CAA 72 bp TTTGTGGTCACAAACAACCTGCTGTCCAGGTTTCACTaGAACAGAAGGTGGAATGTTTCACCTCACAAAGAG +
Preference number: 6 (lower is better)
Translates to: FVVTNNLLSRFH*NRRWNVSPHKE
Trigger: CTCTTTGTGAGGTGAAACATTCCACCTTCTGTTCAAGTGAAACCTGGACAGCAGGTTGTTTGTGACCACAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CAA 72 bp GATTGGCTGCCTACAAAGAGACACAGGGGCCACAGTTaGGTTGAATCCATAGTTTCCACTGTTTCTTTTTGT +
Preference number: 6 (lower is better)
Translates to: DWLPTKRHRGHS*VESIVSTVSFC
Trigger: ACAAAAAGAAACAGTGGAAACTATGGATTCAACCAAACTGTGGCCCCTGTGTCTCTTTGTAGGCAGCCAATC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000644256.1
CDS TCA 72 bp AATGGAATATTTACAGGCACTGGGCTCTCAGGCTGTTaGACCAAATATAGTACCAGCAAAGCCATATCTTCC +
Preference number: 6 (lower is better)
Translates to: NGIFTGTGLSGC*TKYSTSKAISS
Trigger: GGAAGATATGGCTTTGCTGGTACTATATTTGGTTCAACAGCCTGAGAGCCCAGTGCCTGTAAATATTCCATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS TCA 72 bp GAGACCAGCCGTTCCTTAAGAGGAGGAATAGGATGCTaGCATGAATCCTACAGTATATCCCTTATAAGTCAT +
Preference number: 6 (lower is better)
Translates to: ETSRSLRGGIGC*HESYSISLISH
Trigger: ATGACTTATAAGGGATATACTGTAGGATTCATGTCAGCATCCTATTCCTCCTCTTAAGGAACGGCTGGTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 72 bp GTTGATATACTTTACTCCTTACTTCTTTCAGGTATCTaGTCACCTATGGCCTTATCTGTGACATCCTCCCCA +
Preference number: 6 (lower is better)
Translates to: VDILYSLLLSGI*SPMALSVTSSP
Trigger: TGGGGAGGATGTCACAGATAAGGCCATAGGTGAGCAGATACCTGAAAGAAGTAAGGAGTAAAGTATATCAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 72 bp ACCAGTATTTTTCAAAGTCCTTACTTGGACCATCTGTaGCCTTCCATCCAATGGAATATTTACAGGCACTGG +
Preference number: 6 (lower is better)
Translates to: TSIFQSPYLDHL*PSIQWNIYRHW
Trigger: CCAGTGCCTGTAAATATTCCATTGGATGGAAGGGCACAGATGGTCCAAGTAAGGACTTTGAAAAATACTGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 72 bp TACCTTATAAATTATCAGGAGGCTCCCACAGCATCCTaGCAAGCCCTTGCTATCTTCATGATAATTGCTGAA +
Preference number: 6 (lower is better)
Translates to: YLINYQEAPTAS*QALAIFMIIAE
Trigger: TTCAGCAATTATCATGAAGATAGCAAGGGCTTGGCAGGATGCTGTGGGAGCCTCCTGATAATTTATAAGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CAA 72 bp GGATGGTTAGTGGCTTTACCCAGGAAGTACATGATTTaGTGCCAATGTGTCGATCTGATTTCAGTTCCAGTT +
Preference number: 6 (lower is better)
Translates to: GWLVALPRKYMI*CQCVDLISVPV
Trigger: AACTGGAACTGAAATCAGATCGACACATTGGCACAAAATCATGTACTTCCTGGGTAAAGCCACTAACCATCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CAA 72 bp ATGGGCCATGCCCAGAGTTTGGTGAAGACTAGCAATTaGGTACTGAGCAAAGTTTCTCATCTACAAAAGAAG +
Preference number: 6 (lower is better)
Translates to: MGHAQSLVKTSN*VLSKVSHLQKK
Trigger: CTTCTTTTGTAGATGAGAAACTTTGCTCAGTACCAAATTGCTAGTCTTCACCAAACTCTGGGCATGGCCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642318.1
CDS CAA 90 bp TCAACACAGAGCAGAAACAGATGCAGCATTATCCATTATCTTAACTaGGGTTTTCCCTGGACCTCTGATTCTCTAATGAACACAGCTCCT +
Preference number: 6 (lower is better)
Translates to: STQSRNRCSIIHYLN*GFPWTSDSLMNTAP
Trigger: AGGAGCTGTGTTCATTAGAGAATCAGAGGTCCAGGGAAAACCCAAGTTAAGATAATGGATAATGCTGCATCTGTTTCTGCTCTGTGTTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CAA 90 bp AGAATTCTGCCACTGAACCAGCAGTGCTTCCTCATATTCTTCTCATaGCTTGGTGTTTTTGCAGTTGTCTGTGCTCATTGTTATAGTTGC +
Preference number: 6 (lower is better)
Translates to: RILPLNQQCFLIFFS*LGVFAVVCAHCYSC
Trigger: GCAACTATAACAATGAGCACAGACAACTGCAAAAACACCAAGCAATGAGAAGAATATGAGGAAGCACTGCTGGTTCAGTGGCAGAATTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642884.1
CDS TCA 72 bp CAAAAATTACAGCAATTGGATGTGGCTAGGAAGACGTaGTTTATCAACACACTTCTGCAATGCTCCTGTCCA +
Preference number: 6 (lower is better)
Translates to: QKLQQLDVARKT*FINTLLQCSCP
Trigger: TGGACAGGAGCATTGCAGAAGTGTGTTGATAAATCACGTCTTCCTAGCCACATCCAATTGCTGTAATTTTTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS CAA 90 bp TTCTCTAATGAACACAGCTCCTCATTCATGATTCCAGGTAAAATCTaGTCAGAGCTGAAAACAGATGAACTCTTGGTGGGCTACTACTCT +
Preference number: 6 (lower is better)
Translates to: FSNEHSSSFMIPGKI*SELKTDELLVGYYS
Trigger: AGAGTAGTAGCCCACCAAGAGTTCATCTGTTTTCAGCTCTGACAAGATTTTACCTGGAATCATGAATGAGGAGCTGTGTTCATTAGAGAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CAA 90 bp CTAGGAAAGGGATGGTTAGTGGCTTTACCCAGGAAGTACATGATTTaGTGCCAATGTGTCGATCTGATTTCAGTTCCAGTTCTAAATTAC +
Preference number: 6 (lower is better)
Translates to: LGKGWLVALPRKYMI*CQCVDLISVPVLNY
Trigger: GTAATTTAGAACTGGAACTGAAATCAGATCGACACATTGGCACAAAATCATGTACTTCCTGGGTAAAGCCACTAACCATCCCTTTCCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CAA 90 bp GTGTTTTTGCAGTTGTCTGTGCTCATTGTTATAGTTGCTATTTGGTaGCAGTTAAAGATTGGCCTCTTGTTACCCTGCATCAGTAATAGC +
Preference number: 6 (lower is better)
Translates to: VFLQLSVLIVIVAIW*QLKIGLLLPCISNS
Trigger: GCTATTACTGATGCAGGGTAACAAGAGGCCAATCTTTAACTGCAACCAAATAGCAACTATAACAATGAGCACAGACAACTGCAAAAACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000642884.1
CDS TCA 72 bp AATATCAGTGCTTCCAAAGACTCTTCCCTATATCTTTaGGATCTCAACAAACTCTGGTCCAACAATGAAGGG +
Preference number: 6 (lower is better)
Translates to: NISASKDSSLYL*DLNKLWSNNEG
Trigger: CCCTTCATTGTTGGACCAGAGTTTGTTGAGATCTCAAAGATATAGGGAAGAGTCTTTGGAAGCACTGATATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000498146.2
CDS TCA 72 bp TACTTTGACTCTTCTATATTAAGCCACCAAGATACGTaGCACGAAGAGTCCCCAGACATAAATCATCCTCTT +
Preference number: 6 (lower is better)
Translates to: YFDSSILSHQDT*HEESPDINHPL
Trigger: AAGAGGATGATTTATGTCTGGGGACTCTTCGTGTCACGTATCTTGGTGGCTTAATATAGAAGAGTCAAAGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000642318.1
CDS CCA 72 bp AAATATCTGGATCTACCTCCATTATTATTTACCCCATaGGCAACACAGGATTTACAGCTGCCCTTTCTTTCA +
Preference number: 6 (lower is better)
Translates to: KYLDLPPLLFTP*ATQDLQLPFLS
Trigger: TGAAAGAAAGGGCAGCTGTAAATCCTGTGTTGCCCATGGGGTAAATAATAATGGAGGTAGATCCAGATATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000645770.1
CDS CCA 72 bp TTCAGTTCGGATAAATTGGATCTTCTCCCTATTATGTaGCAGCTACTGTGTAATACCCTAGGAATACACATC +
Preference number: 6 (lower is better)
Translates to: FSSDKLDLLPIM*QLLCNTLGIHI
Trigger: GATGTGTATTCCTAGGGTATTACACAGTAGCTGCCACATAATAGGGAGAAGATCCAATTTATCCGAACTGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000645468.1
CDS CCA 72 bp GGTATAATACTACCAGTATTTTTCAAAGTCCTTACTTaGACCATCTGTGCCCTTCCATCCAATGGAATATTT +
Preference number: 6 (lower is better)
Translates to: GIILPVFFKVLT*TICALPSNGIF
Trigger: AAATATTCCATTGGATGGAAGGGCACAGATGGTCCAAGTAAGGACTTTGAAAAATACTGGTAGTATTATACC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS TCA 72 bp ACTGAGTACTTTACGTGTTCCATTTGCCTTGAATGTTaGTATACTTTACTCCTTACTTCTTTCAGGTATCTG +
Preference number: 6 (lower is better)
Translates to: TEYFTCSICLEC*YTLLLTSFRYL
Trigger: CAGATACCTGAAAGAAGTAAGGAGTAAAGTATATCAACATTCAAGGCAAATGGAACACGTAAAGTACTCAGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS GCA 72 bp ATTCTCCATTCCTGTCTTTCACTAGACCTCATTTGTTaGGTTATTTTTCATCATAGCATTAATCAGCTCTTG +
Preference number: 6 (lower is better)
Translates to: ILHSCLSLDLIC*VIFHHSINQLL
Trigger: CAAGAGCTGATTAATGCTATGATGAAAAATAACGCAACAAATGAGGTCTAGTGAAAGACAGGAATGGAGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS CAA 72 bp TGTGTCGATCTGATTTCAGTTCCAGTTCTAAATTACTaGGCTTTCAAGGATGTTTCTAAAACCCTAGTTTCA +
Preference number: 6 (lower is better)
Translates to: CVDLISVPVLNY*AFKDVSKTLVS
Trigger: TGAAACTAGGGTTTTAGAAACATCCTTGAAAGCCAAGTAATTTAGAACTGGAACTGAAATCAGATCGACACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000644405.1
CDS TCA 72 bp GTGACACGAAGAGTCCCCAGACATAAATCATCCTCTTaGATTCTTTACAAGTTGTCTATAATTTTAAGACTA +
Preference number: 6 (lower is better)
Translates to: VTRRVPRHKSSS*ILYKLSIILRL
Trigger: TAGTCTTAAAATTATAGACAACTTGTAAAGAATTCAAGAGGATGATTTATGTCTGGGGACTCTTCGTGTCAC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000642318.1
CDS CAA 72 bp TGGCATTTACTGAGTACTTTACGTGTTCCATTTGCCTaGAATGTTGATATACTTTACTCCTTACTTCTTTCA +
Preference number: 6 (lower is better)
Translates to: WHLLSTLRVPFA*NVDILYSLLLS
Trigger: TGAAAGAAGTAAGGAGTAAAGTATATCAACATTCAAGGCAAATGGAACACGTAAAGTACTCAGTAAATGCCA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000644405.1