RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HECTD4 (Homo sapiens)

Ensembl gene IDs: ENSG00000173064

Ensembl transcript IDs: ENST00000311694.7, ENST00000377560.9, ENST00000547085.1, ENST00000547352.1, ENST00000547519.1, ENST00000548140.1, ENST00000548588.2, ENST00000548896.1, ENST00000550722.5, ENST00000550724.2, ENST00000550968.5, ENST00000552437.1, ENST00000651701.1, ENST00000682272.1

Found 2359 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCAGCAGGGCTTGTTGGGGCTGTCAGGGCTCTCCGTGGCCAGGTaGTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCA +
Preference number: 1 (lower is better)
Translates to: LQQGLLGLSGLSVAR*WEAISAHRASSSVS
Trigger: TGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAGCACCTGGCCACGGAGAGCCCTGACAGCCCCAACAAGCCCTGCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR TCA 90 bp CCCGGCTGCACAGCTCCACCTCCTCGCCCGTCATGGTCAGGTAGGTaGACCTGCAGCAGGGCTTGTTGGGGCTGTCAGGGCTCTCCGTGG +
Preference number: 1 (lower is better)
Translates to: PGCTAPPPRPSWSGR*TCSRACWGCQGSPW
Trigger: CCACGGAGAGCCCTGACAGCCCCAACAAGCCCTGCTGCAGGTTCACCTACCTGACCATGACGGGCGAGGAGGTGGAGCTGTGCAGCCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR TCA 90 bp GGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTaGCAGCCTAATTCTGGGGCTCCCTCCCATCAGCCACTGAGGGGG +
Preference number: 1 (lower is better)
Translates to: GPQWWLPKPAEWVPQ*QPNSGAPSHQPLRG
Trigger: CCCCCTCAGTGGCTGATGGGAGGGAGCCCCAGAATTAGGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR GCA 90 bp CGTGTTTGGGCAATTGGCCCAGCCACCTCTATGTGGAGGGAGGCCTaGTGGGGCTGCCTCTGGAGCAACTCCAGCTCGAGGCTGGAGGGC +
Preference number: 1 (lower is better)
Translates to: RVWAIGPATSMWREA*WGCLWSNSSSRLEG
Trigger: GCCCTCCAGCCTCGAGCTGGAGTTGCTCCAGAGGCAGCCCCAGCAGGCCTCCCTCCACATAGAGGTGGCTGGGCCAATTGCCCAAACACG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR GCA 90 bp GGAGGGACGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTaGCTCAGTGACAGCCTAATTCTGGGGCTCCCTCCCATCAGCCAC +
Preference number: 1 (lower is better)
Translates to: GGTGRSGGFPSQQSG*LSDSLILGLPPISH
Trigger: GTGGCTGATGGGAGGGAGCCCCAGAATTAGGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCGTCCCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR GCA 90 bp GCACTCCACATTCTGCAGCTCCCGCAGCCGCAGGCTCCGGATGGCTaGCGCGTAGATGTCCTTGTTCTCCCACGCCACAAGGATGTGCCG +
Preference number: 1 (lower is better)
Translates to: ALHILQLPQPQAPDG*RVDVLVLPRHKDVP
Trigger: CGGCACATCCTTGTGGCGTGGGAGAACAAGGACATCTACGCGGCAGCCATCCGGAGCCTGCGGCTGCGGGAGCTGCAGAATGTGGAGTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR GCA 90 bp ACAGCTGAGCTGGGGCACAGCAGCAGCAGCGACAGCGAGGAACTCTaGAGCTCCTTACACACCTGCCACAGGAAGTGGCGGAAAGAGCCG +
Preference number: 1 (lower is better)
Translates to: TAELGHSSSSDSEEL*SSLHTCHRKWRKEP
Trigger: CGGCTCTTTCCGCCACTTCCTGTGGCAGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCTGCTGCTGCTGTGCCCCAGCTCAGCTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR CCA 90 bp TCACGCACTCCACATTCTGCAGCTCCCGCAGCCGCAGGCTCCGGATaGCTGCCGCGTAGATGTCCTTGTTCTCCCACGCCACAAGGATGT +
Preference number: 1 (lower is better)
Translates to: SRTPHSAAPAAAGSG*LPRRCPCSPTPQGC
Trigger: ACATCCTTGTGGCGTGGGAGAACAAGGACATCTACGCGGCAGCCATCCGGAGCCTGCGGCTGCGGGAGCTGCAGAATGTGGAGTGCGTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR GCA 90 bp CAGGAGGCCCTGGAATGTGGACGAAAGTTTGGAAAAGCAAAATGTTaGCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTGGT +
Preference number: 1 (lower is better)
Translates to: QEALECGRKFGKAKC*QLLTQGPGGTGRSG
Trigger: ACCACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTTCGTCCACATTCCAGGGCCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR CCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTaGAGGGACGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGG +
Preference number: 1 (lower is better)
Translates to: KVWKSKMLPTPHAGP*RDGPQWWLPKPAEW
Trigger: CCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR TCA 90 bp GCGGCTGGGATGCACCCAGCTAGGCTCTGTGAACTAAGGTCGGGATaGACCCTTAAGTCTCCTGCTCCCGAGGAGGCCTCAGATGAAAAC +
Preference number: 1 (lower is better)
Translates to: AAGMHPARLCELRSG*TLKSPAPEEASDEN
Trigger: GTTTTCATCTGAGGCCTCCTCGGGAGCAGGAGACTTAAGGGTTCATCCCGACCTTAGTTCACAGAGCCTAGCTGGGTGCATCCCAGCCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR GCA 90 bp CTGGGGAGGCAGCGGGCTGACCATCTTCTTTCAAAGCAGGGGAACTaGTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAA +
Preference number: 1 (lower is better)
Translates to: LGRQRADHLLSKQGN*LRALTSRVDLHPIQ
Trigger: TTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTGAAAGAAGATGGTCAGCCCGCTGCCTCCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR CCA 90 bp GCCTGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTaGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTG +
Preference number: 1 (lower is better)
Translates to: ACAAHEQSTTGQRPI*GKDAVGEPGGSSAL
Trigger: CAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR TCA 90 bp AAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTaGGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTACATGGGG +
Preference number: 1 (lower is better)
Translates to: KYHWTKTYLGQRCSG*AWRQLSPGIHTYMG
Trigger: CCCCATGTAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR CCA 90 bp AACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTaGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTACAT +
Preference number: 1 (lower is better)
Translates to: NKVPLDKDLFGAKMQ*VSLEAAQPWHTHLH
Trigger: ATGTAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR TCA 90 bp CCTTACAGCTTGTCATCTACTCAAGTGATGGCCAACAGAAGCTTCTaGACTCCTCCTGGGGAGGTAGCTGACAAGTCCATTCAAGGGATG +
Preference number: 1 (lower is better)
Translates to: PYSLSSTQVMANRSF*TPPGEVADKSIQGM
Trigger: CATCCCTTGAATGGACTTGTCAGCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGATGACAAGCTGTAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR TCA 90 bp AAGGCCCAAAGTGACAGTGTCCAACAAGATGGCCTGTGCTGCTCATaGACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGC +
Preference number: 1 (lower is better)
Translates to: KAQSDSVQQDGLCCS*TKYHWTKTYLGQRC
Trigger: GCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACAGGCCATCTTGTTGGACACTGTCACTTTGGGCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR TCA 90 bp TCTTTCAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTaGCTTGCATCCAATACAACTGATGCAGCTGTCATGATTAACCCT +
Preference number: 1 (lower is better)
Translates to: SFKAGELLAGTHLQS*LASNTTDAAVMINP
Trigger: AGGGTTAATCATGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTGAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR CCA 90 bp GGCAAGGCAGACTTCCTTCTGAATTTCAGGGCAAATTTGATCTTTTaGAGCCATCAACAACTGCCAAAGAAGCAATCCCGACCGTCGAAT +
Preference number: 1 (lower is better)
Translates to: GKADFLLNFRANLIF*SHQQLPKKQSRPSN
Trigger: ATTCGACGGTCGGGATTGCTTCTTTGGCAGTTGTTGATGGCTCCAAAAGATCAAATTTGCCCTGAAATTCAGAAGGAAGTCTGCCTTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550724.2
3UTR TCA 90 bp CCAATATTCACAATATTATACAATAAATACAGCGATGTGATTCTGTaGGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCC +
Preference number: 1 (lower is better)
Translates to: PIFTILYNKYSDVIL*DLARPKVTVSNKMA
Trigger: GGCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACATCGCTGTATTTATTGTATAATATTGTGAATATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp TTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCCACCTCCTCGGCTGGAGGGCAGGGCTaGCCACAGGCTTGTCTGTGG +
Preference number: 2 (lower is better)
Translates to: FSHATRMCRPRLHSSTSSAGGQG*PQACLW
Trigger: CCACAGACAAGCCTGTGGCCAGCCCTGCCCTCCAGC...CGAGGAGGTGGAGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR GCA 90 bp GCAGTGTCGGGACCCCCATCTTTGCAGGGGCAGGTGAACGGGATGCGCTCCTGGGAGGCCTGCTGGGGCTaGCTCTGGAGCAACTCCAGC +
Preference number: 2 (lower is better)
Translates to: AVSGPPSLQGQVNGMRSWEACWG*LWSNSS
Trigger: GCTGGAGTTGCTCCAGAGGCAGCCCCAGCAGGCCTC...CCAGGAGCGCATCCCGTTCACCTGCCCCTGCAAAGATGGGGGTCCCGACACTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR TCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTGCTGGGTGGTTCTGTaGTGGGGAACCAGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: GWPQACLWRRSAESTSALCWVVL*WGTSWG
Trigger: GCCCCAGCTGGTTCCCCATCACAGAACCACCCAGCA...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp CTTGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCCACCTCGAGTGGGTGCCTCAGTaGCAGCCTAATTCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: LVLPRHKDVPAPAAQLHLEWVPQ*QPNSGA
Trigger: AGCCCCAGAATTAGGCTGTCACTGAGGCACCCACTC...GAGGTGGAGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR CCA 90 bp CTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATTGATGCTGACGGGCCGCAGTGGTaGCTTCCCAAGCCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: LGGDLSAQGLQLGLIIDADGPQW*LPKPAE
Trigger: CTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCGTC...AGCATCAATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR CCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGAGGGACGGGCCGCAGTaGTGGCTTCCCAAGCCAGCA +
Preference number: 2 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWRDGPQ*WLPKPA
Trigger: TGCTGGCTTGGGAAGCCACCACTGCGGCCCGTCCCT...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATGTGCCGGCCCCGGCTaGACAGCTCCACCTCCTCGC +
Preference number: 2 (lower is better)
Translates to: QSRGTACGHSPPELTCIQCAGPG*TAPPPR
Trigger: GCGAGGAGGTGGAGCTGTGCAGCCGGGGCCGGCACA...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR GCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTACACGCCACAAGGATGTaGCGGCCCCGGCTGCACAGC +
Preference number: 2 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLHATRM*RPRLHS
Trigger: GCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTG...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR TCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTCGAGGAGGCCTCAGATaGAAACTGTCAGACCAGGGC +
Preference number: 2 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSRGGLR*KLSDQG
Trigger: GCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCG...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCGAGGCCTGCTGGGGCTaGCTCTGGAGCAACTCCAGC +
Preference number: 2 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTEACWG*LWSNSS
Trigger: GCTGGAGTTGCTCCAGAGGCAGCCCCAGCAGGCCTC...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp CCAGGTGCTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATGACAGCGAGGAACTCTaGAGCTCCTTACACACCTGC +
Preference number: 2 (lower is better)
Translates to: PGAGRRSQRTGPPARSHHDSEEL*SSLHTC
Trigger: GCAGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTC...ATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAGCACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR GCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTGACGTCTGCCCGAATTaGAATCCCCAGCAGCTGCCC +
Preference number: 2 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFDVCPN*NPQQLP
Trigger: GGGCAGCTGCTGGGGATTGCAATTCGGGCAGACGTC...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR GCA 90 bp CAGGGGCAGGTGAACGGGATGCGCTCCTGGTTGCAGGCAAACTTGATGAACTTGCTCTCCGTGGCCAGGTaGTGGGAGGCGATCTCAGCG +
Preference number: 2 (lower is better)
Translates to: QGQVNGMRSWLQANLMNLLSVAR*WEAISA
Trigger: CGCTGAGATCGCCTCCCAGCACCTGGCCACGGAGAG...CAAGTTCATCAAGTTTGCCTGCAACCAGGAGCGCATCCCGTTCACCTGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR TCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCTGCTGGGTGGTTCTGTaGTGGGGAACCAGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTCWVVL*WGTSWG
Trigger: GCCCCAGCTGGTTCCCCATCACAGAACCACCCAGCA...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCGTGGAGGCGCTCTGCTaGAAGCACGAGCGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTVEALC*KHERSV
Trigger: CACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCAC...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTCCACAGGCTTGTCTGTaGAGGCGCTCTGCTGAAAGC +
Preference number: 2 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFPQACL*RRSAES
Trigger: GCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGG...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTATGCAGCAGGGCTTGTTaGGGCTGTCAGGGCTCTCCG +
Preference number: 2 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLCSRAC*GCQGSP
Trigger: CGGAGAGCCCTGACAGCCCCAACAAGCCCTGCTGCA...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR TCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTTCATGGTCAGGTAGGTaGACCTGCAGCAGGGCTTGT +
Preference number: 2 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFSWSGR*TCSRAC
Trigger: ACAAGCCCTGCTGCAGGTTCACCTACCTGACCATGA...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR GCA 90 bp CCAGAAGAACTCGATGTGCTGGTCCGTCTCCATCAGCCCCACTTGGTACATGGTGGGCAGCGGGACGTCTaGCCGAATTGCAATCCCCAG +
Preference number: 2 (lower is better)
Translates to: PEELDVLVRLHQPHLVHGGQRDV*PNCNPQ
Trigger: CTGGGGATTGCAATTCGGGCAGACGTCCCGCTGCCC...ACCATGTACCAAGTGGGGCTGATGGAGACGGACCAGCACATCGAGTTCTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR CCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTACACGAGCGCTCTGTGTaGCCGAGGTCATTGTACCCC +
Preference number: 2 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLHERSV*PRSLYP
Trigger: GGGGTACAATGACCTCGGCCACACAGAGCGCTCGTG...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTACGTGTTTGGGCAATTaGCCCAGCCACCTCTATGTG +
Preference number: 2 (lower is better)
Translates to: PHSKELWPLGRQRADHLLTCLGN*PSHLYV
Trigger: CACATAGAGGTGGCTGGGCCAATTGCCCAAACACGT...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCCCCCTGCGGCTGGGATaGACCCAGCTAGGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGPLRLG*TQLGSV
Trigger: CACAGAGCCTAGCTGGGTGCATCCCAGCCGCAGGGG...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATATGTCTTCTCACCCCCTaGGGCTGGGATGCACCCAGC +
Preference number: 2 (lower is better)
Translates to: KQGNCLRALTSRVDLHPICLLTP*GWDAPS
Trigger: GCTGGGTGCATCCCAGCCGCAGGGGGTGAGAAGACA...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCAAGGGGAGGCCGCAGGTaGGCAGCTCCATCTCCAGTG +
Preference number: 2 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSRGGRR*AAPSPV
Trigger: CACTGGAGATGGAGCTGCGCACCTGCGGCCTCCCCT...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR CCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCGACGGGCCGCAGTGGTaGCTTCCCAAGCCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGDGPQW*LPKPAE
Trigger: CTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCGTC...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCCGGCTTCCTGCTGGGTaGTTCTGTGATGGGGAACCA +
Preference number: 2 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTRLPAG*FCDGEP
Trigger: TGGTTCCCCATCACAGAACCACCCAGCAGGAAGCCG...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTACGTGTTTGGGCAATTaGCCCAGCCACCTCTATGTG +
Preference number: 2 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFTCLGN*PSHLYV
Trigger: CACATAGAGGTGGCTGGGCCAATTGCCCAAACACGT...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGGCCGCAGGCTCCGGATaGCTGCCGCGTAGATGTCCT +
Preference number: 2 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLAAGSG*LPRRCP
Trigger: AGGACATCTACGCGGCAGCCATCCGGAGCCTGCGGC...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR TCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCAGTGGAGGCGCTCTGCTaGAAGCACGAGCGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSVEALC*KHERSV
Trigger: CACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCAC...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTGAGGAGGCCCCCACCTaGGCATTGTCCCCCATCTCT +
Preference number: 2 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFEEAPT*ALSPIS
Trigger: AGAGATGGGGGACAATGCTCAGGTGGGGGCCTCCTC...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTGGAAAAGCAAAATGTTaGCAACTCCTCACGCAGGGC +
Preference number: 2 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFGKAKC*QLLTQG
Trigger: GCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCC...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGCCCCTGCGGCTGGGATaGACCCAGCTAGGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLPLRLG*TQLGSV
Trigger: CACAGAGCCTAGCTGGGTGCATCCCAGCCGCAGGGG...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTGTCTTCTCACCCCCTaGGGCTGGGATGCACCCAGC +
Preference number: 2 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLCLLTP*GWDAPS
Trigger: GCTGGGTGCATCCCAGCCGCAGGGGGTGAGAAGACA...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACTGCTGGGGCTGCCTCTaGAGCAACTCCAGCTCGAGG +
Preference number: 2 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDCWGCL*SNSSSR
Trigger: CCTCGAGCTGGAGTTGCTCCAGAGGCAGCCCCAGCA...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTGCAGATAGGGAGGTATaGGAGGGGCAGGGGAACCAC +
Preference number: 2 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLADREV*EGQGNH
Trigger: GTGGTTCCCCTGCCCCTCCCATACCTCCCTATCTGC...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTAGGTTTGGATCTGTCTaGACCTCAATGTGCTCTCGG +
Preference number: 2 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFRFGSV*TSMCSR
Trigger: CCGAGAGCACATTGAGGTCCAGACAGATCCAAACCT...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp GTGAATGGCACAACGAAGTTTCTCCAGCATGATTTCCAGAGAGGAGTACTGGGGTCCGTGGCCAGGTGCTaGGAGGCGATCTCAGCGCAC +
Preference number: 2 (lower is better)
Translates to: VNGTTKFLQHDFQRGVLGSVARC*EAISAH
Trigger: GTGCGCTGAGATCGCCTCCCAGCACCTGGCCACGGA...CCCCAGTACTCCTCTCTGGAAATCATGCTGGAGAAACTTCGTTGTGCCATTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR CAA 90 bp GGGAGGCAGCGGGCTGACCATCTTCTTTCAAAGCAGGGGAACTGCTaGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTG +
Preference number: 2 (lower is better)
Translates to: GRQRADHLLSKQGNC*RALTSRVDLHPIQL
Trigger: CAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTGAAAGAAGATGGTCAGCCCGCTGCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR CAA 90 bp CTTCTTGACGTAATTGTAGGTGAGGATATCCGCTTCCTGCAGGTCTaGCTCAGGGTCCAAGGGCTCGCCCACCAGCGTCTTCCAGAAGGA +
Preference number: 2 (lower is better)
Translates to: LLDVIVGEDIRFLQV*LRVQGLAHQRLPEG
Trigger: TCCTTCTGGAAGACGCTGGTGGGCGAGCCCTTGGACCCTGAGCAAGACCTGCAGGAAGCGGATATCCTCACCTACAATTACGTCAAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR TCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTAAGCATGCCAGCCTTTaGACTTGCTCAGCAAGAGTA +
Preference number: 2 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFKHASL*TCSARV
Trigger: TACTCTTGCTGAGCAAGTTCAAAGGCTGGCATGCTT...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGCTTTGCAGGGGCAGGTaGACGGGATGCGCTCCTGGT +
Preference number: 2 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLLCRGR*TGCAPG
Trigger: ACCAGGAGCGCATCCCGTTCACCTGCCCCTGCAAAG...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR GCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACAGCCAGCAGAGTGGGTaGCTCAGTGACAGCCTAATT +
Preference number: 2 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDSQQSG*LSDSLI
Trigger: AATTAGGCTGTCACTGAGGCACCCACTCTGCTGGCT...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGGCTGGAGGGCAGGGCTaGCCACAGGCTTGTCTGTGG +
Preference number: 2 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTAGGQG*PQACLW
Trigger: CCACAGACAAGCCTGTGGCCAGCCCTGCCCTCCAGC...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGCCAGCCACCTCTATGTaGAGGGAGGCCTGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTPATSM*REACWG
Trigger: GCCCCAGCAGGCCTCCCTCCACATAGAGGTGGCTGG...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACACCAGCCACCTCTATGTaGAGGGAGGCCTGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTPATSM*REACWG
Trigger: GCCCCAGCAGGCCTCCCTCCACATAGAGGTGGCTGG...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCGCAGATAGGGAGGTATaGGAGGGGCAGGGGAACCAC +
Preference number: 2 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGADREV*EGQGNH
Trigger: GTGGTTCCCCTGCCCCTCCCATACCTCCCTATCTGC...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGGGGGCAAAGATGCAGTaGGTGAGCCTGGAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLGAKMQ*VSLEAA
Trigger: AGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCC...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR CAA 90 bp AAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGTGTTaGGGCAATTGGCCCAGCCACCTCTATGTGGAGGGAGGCCTGCTG +
Preference number: 2 (lower is better)
Translates to: KQEDEHIKLPVCLTC*GNWPSHLYVEGGLL
Trigger: CAGCAGGCCTCCCTCCACATAGAGGTGGCTGGGCCAATTGCCCAAACACGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCCGAGGAGGCCTCAGATaGAAACTGTCAGACCAGGGC +
Preference number: 2 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSRGGLR*KLSDQG
Trigger: GCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCG...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTCGAGGAGGCCTCAGATaGAAACTGTCAGACCAGGGC +
Preference number: 2 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTRGGLR*KLSDQG
Trigger: GCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCG...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAGGCCTGTGCTGCTCATaGACAAAGTACCACTGGACA +
Preference number: 2 (lower is better)
Translates to: QSRGTACGHSPPELTCIQGLCCS*TKYHWT
Trigger: TGTCCAGTGGTACTTTGTTCATGAGCAGCACAGGCC...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTGTTCTTATTGACAGCTaGGCTGGGGCACAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLVLIDS*AGAQQQ
Trigger: CTGCTGCTGTGCCCCAGCTCAGCTGTCAATAAGAAC...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR GCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAACTTGTCCTACGTCACTaGAGGGAGGAAGGGCCATTT +
Preference number: 2 (lower is better)
Translates to: QSRGTACGHSPPELTCIQLVLRH*REEGPF
Trigger: AAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAG...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTAGCAGGGGAACTGCTTaGGGGCACTCACCTCCAGAG +
Preference number: 2 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACSRGTA*GHSPPE
Trigger: CTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCT...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGAGGGACGGGCCGCAGTaGTGGCTTCCCAAGCCAGCA +
Preference number: 2 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTRDGPQ*WLPKPA
Trigger: TGCTGGCTTGGGAAGCCACCACTGCGGCCCGTCCCT...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGTGCTGGGGCTGCCTCTaGAGCAACTCCAGCTCGAGG +
Preference number: 2 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKCWGCL*SNSSSR
Trigger: CCTCGAGCTGGAGTTGCTCCAGAGGCAGCCCCAGCA...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp GTGAATGGCACAACGAAGTTTCTCCAGCATGATTTCCAGAGAGGAGTACTGGGGGCAGATAGGGAGGTATaGGAGGGGCAGGGGAACCAC +
Preference number: 2 (lower is better)
Translates to: VNGTTKFLQHDFQRGVLGADREV*EGQGNH
Trigger: GTGGTTCCCCTGCCCCTCCCATACCTCCCTATCTGC...CCCCAGTACTCCTCTCTGGAAATCATGCTGGAGAAACTTCGTTGTGCCATTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR CCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTGGGGCAAAGATGCAGTaGGTGAGCCTGGAGGCAGCT +
Preference number: 2 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACGAKMQ*VSLEAA
Trigger: AGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCC...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCCAGCTCCATCTCCAGTaGGCTGAGCATGGTCAGCAG +
Preference number: 2 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGQLHLQ*AEHGQQ
Trigger: CTGCTGACCATGCTCAGCCCACTGGAGATGGAGCTG...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR GCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATACCCCTGCGGCTGGGATaGACCCAGCTAGGCTCTGTG +
Preference number: 2 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIPLRLG*TQLGSV
Trigger: CACAGAGCCTAGCTGGGTGCATCCCAGCCGCAGGGG...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTGTCTGGACCTCAATGTaGTCTCGGAGAAGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTVWTSM*SRRSSH
Trigger: GTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAGTCTGGACCTCAATGTaGTCTCGGAGAAGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGVWTSM*SRRSSH
Trigger: GTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTGCTTCCTGCAGGTCTTaGTCAGGGTCCAAGGGCTCG +
Preference number: 2 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCASCRS*SGSKGS
Trigger: CGAGCCCTTGGACCCTGAGCAAGACCTGCAGGAAGC...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR CCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTATGTGGACGAAAGTTTaGAAAAGCAAAATGTTGCCA +
Preference number: 2 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGMWTKV*KSKMLP
Trigger: TGGCAACATTTTGCTTTTCCAAACTTTCGTCCACAT...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGCCAGCCACCTCTATGTaGAGGGAGGCCTGCTGGGGC +
Preference number: 2 (lower is better)
Translates to: GILSIMVLDAFPKSYREEPATSM*REACWG
Trigger: GCCCCAGCAGGCCTCCCTCCACATAGAGGTGGCTGG...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTTGTGTCTCACGTGTTTaGGCAATTGGCCCAGCCACC +
Preference number: 2 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFCVSRV*AIGPAT
Trigger: GGTGGCTGGGCCAATTGCCCAAACACGTGAGACACA...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTTGTGTCTCACGTGTTTaGGCAATTGGCCCAGCCACC +
Preference number: 2 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTCVSRV*AIGPAT
Trigger: GGTGGCTGGGCCAATTGCCCAAACACGTGAGACACA...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACTGTGTCTCACGTGTTTaGGCAATTGGCCCAGCCACC +
Preference number: 2 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDCVSRV*AIGPAT
Trigger: GGTGGCTGGGCCAATTGCCCAAACACGTGAGACACA...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACTTGGTACATGGTGTaGGCCTTGAGGAACTCGAGG +
Preference number: 2 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLTWYMV*ALRNSR
Trigger: CCTCGAGTTCCTCAAGGCCCACACCATGTACCAAGT...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR CCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGAACGGGATGCGCTCCTaGTTGCAGGCAAACTTGATG +
Preference number: 2 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTNGMRS*LQANLM
Trigger: CATCAAGTTTGCCTGCAACCAGGAGCGCATCCCGTT...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR TCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCAAGCAGACCCCAAATTaGGCAGAGCACCTCAGTCCA +
Preference number: 2 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSKQTPN*AEHLSP
Trigger: TGGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTT...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCAAGCAGACCCCAAATTaGGCAGAGCACCTCAGTCCA +
Preference number: 2 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGKQTPN*AEHLSP
Trigger: TGGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTT...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCGGCCTGTGCTGCTCATaGACAAAGTACCACTGGACA +
Preference number: 2 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSGLCCS*TKYHWT
Trigger: TGTCCAGTGGTACTTTGTTCATGAGCAGCACAGGCC...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGATGGCAAGGCCCAAAGTaGCAGTGTCCAACAAGATGG +
Preference number: 2 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGWQGPK*QCPTRW
Trigger: CCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCA...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTGTCTGGACCTCAATGTaGTCTCGGAGAAGCAGCCAC +
Preference number: 2 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACVWTSM*SRRSSH
Trigger: GTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACCAGAAGAACTCGATGTaGTGGTCCGTCTCCATCAGC +
Preference number: 2 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDQKNSM*WSVSIS
Trigger: GCTGATGGAGACGGACCAGCACATCGAGTTCTTCTG...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR CCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCGACGGGCCGCAGTGGTaGCTTCCCAAGCCAGCAGAG +
Preference number: 2 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSDGPQW*LPKPAE
Trigger: CTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCGTC...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGTCTTCCAGGAGGCCCTaGAATGTGGACGAAAGTTTG +
Preference number: 2 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTSSRRP*NVDESL
Trigger: CAAACTTTCGTCCACATTCCAGGGCCTCCTGGAAGA...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCCACAGGCTTGTCTGTaGAGGCGCTCTGCTGAAAGC +
Preference number: 2 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCPQACL*RRSAES
Trigger: GCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGG...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTGAGGCAGCTCAGCCCTaGCATACACACTTACATGGG +
Preference number: 2 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACEAAQP*HTHLHG
Trigger: CCCATGTAAGTGTGTATGCCAGGGCTGAGCTGCCTC...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGAACTAAGGTCGGGATaGACCCTTAAGTCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDELRSG*TLKSPA
Trigger: AGCAGGAGACTTAAGGGTTCATCCCGACCTTAGTTC...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACTCAGTCCACTCTTTTaGAAATGGGTGTGGCCCTTT +
Preference number: 2 (lower is better)
Translates to: KQGNCLRALTSRVDLHPILSPLF*KWVWPF
Trigger: AAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAG...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGGTCTCCATCTGGACTTaGGTGTCTGGGTCACTAAAG +
Preference number: 2 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLVSIWT*VSGSLK
Trigger: CTTTAGTGACCCAGACACTCAAGTCCAGATGGAGAC...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTAGCGATGTGATTCTGTaGGACCTGGCAAGGCCCAAA +
Preference number: 2 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACSDVIL*DLARPK
Trigger: TTTGGGCCTTGCCAGGTCTCACAGAATCACATCGCT...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTGCCAACAGAAGCTTCTaGACTCCTCCTGGGGAGGTA +
Preference number: 2 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAANRSF*TPPGEV
Trigger: TACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGC...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGAGCCAGCAGAGTGGGTaGCTCAGTGACAGCCTAATT +
Preference number: 2 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLSQQSG*LSDSLI
Trigger: AATTAGGCTGTCACTGAGGCACCCACTCTGCTGGCT...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGCTTGGGTGGGCCTGTTaGTCCAGAGGAGCCCTGCCT +
Preference number: 2 (lower is better)
Translates to: VCTHVSVYMSREKSGRRELGWAC*SRGALP
Trigger: AGGCAGGGCTCCTCTGGAGCAACAGGCCCACCCAAG...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
3UTR-3UTR CCA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTGGAGGCCCTGGAATGTaGACGAAAGTTTGGAAAAGC +
Preference number: 2 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFGGPGM*TKVWKS
Trigger: GCTTTTCCAAACTTTCGTCCACATTCCAGGGCCTCC...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCTCTTCCAGGAGGCCCTaGAATGTGGACGAAAGTTTG +
Preference number: 2 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSSSRRP*NVDESL
Trigger: CAAACTTTCGTCCACATTCCAGGGCCTCCTGGAAGA...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATAGTTACAGGGAGGAGATaGATGCTAACGGCTCTATCT +
Preference number: 2 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIVTGRR*MLTALS
Trigger: AGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAAC...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTAAGAACTCGATGTGCTaGTCCGTCTCCATCAGCCCC +
Preference number: 2 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCKNSMC*SVSISP
Trigger: GGGGCTGATGGAGACGGACCAGCACATCGAGTTCTT...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR GCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGGAAAAGCAAAATGTTaGCAACTCCTCACGCAGGGC +
Preference number: 2 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLGKAKC*QLLTQG
Trigger: GCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCC...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGTGTCTTCTCACCCCCTaGGGCTGGGATGCACCCAGC +
Preference number: 2 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMCLLTP*GWDAPS
Trigger: GCTGGGTGCATCCCAGCCGCAGGGGGTGAGAAGACA...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGGAGGCCCTGGAATGTaGACGAAAGTTTGGAAAAGC +
Preference number: 2 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLGGPGM*TKVWKS
Trigger: GCTTTTCCAAACTTTCGTCCACATTCCAGGGCCTCC...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATACGGCTTCCTGCTGGGTaGTTCTGTGATGGGGAACCA +
Preference number: 2 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIRLPAG*FCDGEP
Trigger: TGGTTCCCCATCACAGAACCACCCAGCAGGAAGCCG...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTTTTAGGGCCAAGGTTTaGATCTGTCTGGACCTCAAT +
Preference number: 2 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLFRAKV*ICLDLN
Trigger: ATTGAGGTCCAGACAGATCCAAACCTTGGCCCTAAA...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTAGAATCTGGTGGCCATaGGGGACAATGTCCAAGAAG +
Preference number: 2 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTARIWWP*GTMSKK
Trigger: CTTCTTGGACATTGTCCCTCATGGCCACCAGATTCT...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAAGAATCTGGTGGCCATaGGGGACAATGTCCAAGAAG +
Preference number: 2 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTRIWWP*GTMSKK
Trigger: CTTCTTGGACATTGTCCCTCATGGCCACCAGATTCT...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTGAACTAAGGTCGGGATaGACCCTTAAGTCTCCTGCT +
Preference number: 2 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAELRSG*TLKSPA
Trigger: AGCAGGAGACTTAAGGGTTCATCCCGACCTTAGTTC...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTTGTCATCTACTCAAGTaGTGGCCAACAGAAGCTTCT +
Preference number: 2 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTCHLLK*WPTEAS
Trigger: AGAAGCTTCTGTTGGCCATCACTTGAGTAGATGACA...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAAGGATATCCGCTTCCTaGAGGTCTTGCTCAGGGTCC +
Preference number: 2 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIRISAS*RSCSGS
Trigger: GGACCCTGAGCAAGACCTGCAGGAAGCGGATATCCT...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR CCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGATTTAGGGCCAAGGTTTaGATCTGTCTGGACCTCAAT +
Preference number: 2 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGFRAKV*ICLDLN
Trigger: ATTGAGGTCCAGACAGATCCAAACCTTGGCCCTAAA...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATTCCATCAGCCCCACTTaGTACATGGTGTGGGCCTTG +
Preference number: 2 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDSISPT*YMVWAL
Trigger: CAAGGCCCACACCATGTACCAAGTGGGGCTGATGGA...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR TCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACGAGTGGGTGCCTCAGTaGCAGCCTAATTCTGGGGCT +
Preference number: 2 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNEWVPQ*QPNSGA
Trigger: AGCCCCAGAATTAGGCTGTCACTGAGGCACCCACTC...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTGGACAAAGACCTATTTaGGGCAAAGATGCAGTGGGT +
Preference number: 2 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCGQRPI*GKDAVG
Trigger: ACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCC...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGGTAACTTCCCTTGGGTaGGCCTGTTGCTCCAGAGGA +
Preference number: 2 (lower is better)
Translates to: VCTHVSVYMSREKSGRREVTSLG*ACCSRG
Trigger: TCCTCTGGAGCAACAGGCCCACCCAAGGGAAGTTAC...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
3UTR-3UTR CCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACATCCAGAGAGGAGTACTaGGGAAGCTTGATCATGAAC +
Preference number: 2 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTSREEY*GSLIMN
Trigger: GTTCATGATCAAGCTTCCCCAGTACTCCTCTCTGGA...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR CAA 90 bp TGGCAAGGCAGACTTCCTTCTGAATTTCAGGGCAAATTTGATCTTTaGGAGCCATCAACAACTGCCAAAGAAGCAATCCCGACCGTCGAA +
Preference number: 2 (lower is better)
Translates to: WQGRLPSEFQGKFDL*EPSTTAKEAIPTVE
Trigger: TTCGACGGTCGGGATTGCTTCTTTGGCAGTTGTTGATGGCTCCAAAAGATCAAATTTGCCCTGAAATTCAGAAGGAAGTCTGCCTTGCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550724.2
3UTR-3UTR TCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGAGAATCTGGTGGCCATaGGGGACAATGTCCAAGAAG +
Preference number: 2 (lower is better)
Translates to: GILSIMVLDAFPKSYREERIWWP*GTMSKK
Trigger: CTTCTTGGACATTGTCCCTCATGGCCACCAGATTCT...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTTCTAAAGCAGGAAGATaGACACATAAAGCTCCCTGT +
Preference number: 2 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACSKAGR*THKAPC
Trigger: ACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGA...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGTCTCCATCTGGACTTaGGTGTCTGGGTCACTAAAG +
Preference number: 2 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIVSIWT*VSGSLK
Trigger: CTTTAGTGACCCAGACACTCAAGTCCAGATGGAGAC...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR GCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAGCTCCTTACACACCTaGCACAGGAAGTGGCGGAAA +
Preference number: 2 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSSSLHT*HRKWRK
Trigger: TTTCCGCCACTTCCTGTGGCAGGTGTGTAAGGAGCT...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR CCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGGAGGCCCTGGAATGTaGACGAAAGTTTGGAAAAGC +
Preference number: 2 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIGGPGM*TKVWKS
Trigger: GCTTTTCCAAACTTTCGTCCACATTCCAGGGCCTCC...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp TGGTTAGGATCACATCCCGTAGCTGGGAGAGTCCACTGTTTCTCTCTCCTTCTGGCAAATTTGATCTTTTaGAGCCATCAACAACTGCCA +
Preference number: 2 (lower is better)
Translates to: WLGSHPVAGRVHCFSLLLANLIF*SHQQLP
Trigger: TGGCAGTTGTTGATGGCTCCAAAAGATCAAATTTGC...CAGAAGGAGAGAGAAACAGTGGACTCTCCCAGCTACGGGATGTGATCCTAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550724.2
3UTR-3UTR TCA 90 bp TTGGTTAGGATCACATCCCGTAGCTGGGAGAGTCCACTGTTTCTCTCTCCTTCTATTTCAGGGCAAATTTaGTCTTTTGGAGCCATCAAC +
Preference number: 2 (lower is better)
Translates to: LVRITSRSWESPLFLSPSISGQI*SFGAIN
Trigger: GTTGATGGCTCCAAAAGATCAAATTTGCCCTGAAAT...AGAAGGAGAGAGAAACAGTGGACTCTCCCAGCTACGGGATGTGATCCTAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550724.2
3UTR-3UTR GCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAAGCCAGCAGAGTGGGTaGCTCAGTGACAGCCTAATT +
Preference number: 2 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTSQQSG*LSDSLI
Trigger: AATTAGGCTGTCACTGAGGCACCCACTCTGCTGGCT...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCATGTGGACGAAAGTTTaGAAAAGCAAAATGTTGCCA +
Preference number: 2 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSMWTKV*KSKMLP
Trigger: TGGCAACATTTTGCTTTTCCAAACTTTCGTCCACAT...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATACTCACCTCCAGAGTTaGCTTGCATCCAATACAACT +
Preference number: 2 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNTHLQS*LASNTT
Trigger: AGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGT...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATTGTCATCTACTCAAGTaGTGGCCAACAGAAGCTTCT +
Preference number: 2 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNCHLLK*WPTEAS
Trigger: AGAAGCTTCTGTTGGCCATCACTTGAGTAGATGACA...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTGGACAAAGACCTATTTaGGGCAAAGATGCAGTGGGT +
Preference number: 2 (lower is better)
Translates to: FPKSYREEMDANGSISRIGQRPI*GKDAVG
Trigger: ACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCC...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATTCTAAAGCAGGAAGATaGACACATAAAGCTCCCTGT +
Preference number: 2 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDSKAGR*THKAPC
Trigger: ACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGA...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTTCTAAAGCAGGAAGATaGACACATAAAGCTCCCTGT +
Preference number: 2 (lower is better)
Translates to: FPKSYREEMDANGSISRISKAGR*THKAPC
Trigger: ACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGA...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR TCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTATAAATACAGCGATGTaGTTCTGTGAGACCTGGCAA +
Preference number: 2 (lower is better)
Translates to: FPKSYREEMDANGSISRIINTAM*FCETWQ
Trigger: TTGCCAGGTCTCACAGAATCACATCGCTGTATTTAT...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGATGTGGACGAAAGTTTaGAAAAGCAAAATGTTGCCA +
Preference number: 2 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTMWTKV*KSKMLP
Trigger: TGGCAACATTTTGCTTTTCCAAACTTTCGTCCACAT...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR GCA 72 bp AGGCCGGCCCGCACGGCCGTCACGCACTCCACATTCTaGAGCTCCCGCAGCCGCAGGCTCCGGATGGCTGCC +
Preference number: 3 (lower is better)
Translates to: RPARTAVTHSTF*SSRSRRLRMAA
Trigger: GGCAGCCATCCGGAGCCTGCGGCTGCGGGAGCTGCAGAATGTGGAGTGCGTGACGGCCGTGCGGGCCGGCCT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR GCA 72 bp GGCTTGTTGGGGCTGTCAGGGCTCTCCGTGGCCAGGTaGTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: GLLGLSGLSVAR*WEAISAHRASS
Trigger: GCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAGCACCTGGCCACGGAGAGCCCTGACAGCCCCAACAAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR CCA 72 bp ACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTaGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAG +
Preference number: 3 (lower is better)
Translates to: TPHAGPWRDGPQ*WLPKPAEWVPQ
Trigger: CTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR GCA 72 bp CCAGCCACCTCTATGTGGAGGGAGGCCTGCTGGGGCTaGCTCTGGAGCAACTCCAGCTCGAGGCTGGAGGGC +
Preference number: 3 (lower is better)
Translates to: PATSMWREACWG*LWSNSSSRLEG
Trigger: GCCCTCCAGCCTCGAGCTGGAGTTGCTCCAGAGGCAGCCCCAGCAGGCCTCCCTCCACATAGAGGTGGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR GCA 72 bp TGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTaGACAGCTCCACCTCCTCGCCCGTCATGGTCAGGT +
Preference number: 3 (lower is better)
Translates to: CSPTPQGCAGPG*TAPPPRPSWSG
Trigger: ACCTGACCATGACGGGCGAGGAGGTGGAGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR GCA 72 bp GGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTaGCTCAGTGACAGCCTAATTCTGGGGCTCCCTCCC +
Preference number: 3 (lower is better)
Translates to: GRSGGFPSQQSG*LSDSLILGLPP
Trigger: GGGAGGGAGCCCCAGAATTAGGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR CCA 72 bp GAGGCTGGAGGGCAGGGCTGGCCACAGGCTTGTCTGTaGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTGT +
Preference number: 3 (lower is better)
Translates to: EAGGQGWPQACL*RRSAESTSALC
Trigger: ACACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCCCTGCCCTCCAGCCTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTGGACGTCTGCCCGAATaGCAATCCCCAGCAGCTGCC +
Preference number: 3 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGGRLPE*QSPAAA
Trigger: GGCAGCTGCTGGGGATTGCAATTCGGGCAGACGTCC...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR TCA 72 bp ACAGCTCCACCTCCTCGCCCGTCATGGTCAGGTAGGTaGACCTGCAGCAGGGCTTGTTGGGGCTGTCAGGGC +
Preference number: 3 (lower is better)
Translates to: TAPPPRPSWSGR*TCSRACWGCQG
Trigger: GCCCTGACAGCCCCAACAAGCCCTGCTGCAGGTTCACCTACCTGACCATGACGGGCGAGGAGGTGGAGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR GCA 72 bp CTGGGGCACAGCAGCAGCAGCGACAGCGAGGAACTCTaGAGCTCCTTACACACCTGCCACAGGAAGTGGCGG +
Preference number: 3 (lower is better)
Translates to: LGHSSSSDSEEL*SSLHTCHRKWR
Trigger: CCGCCACTTCCTGTGGCAGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCTGCTGCTGCTGTGCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR GCA 72 bp ATTCTGCAGCTCCCGCAGCCGCAGGCTCCGGATGGCTaGCGCGTAGATGTCCTTGTTCTCCCACGCCACAAG +
Preference number: 3 (lower is better)
Translates to: ILQLPQPQAPDG*RVDVLVLPRHK
Trigger: CTTGTGGCGTGGGAGAACAAGGACATCTACGCGGCAGCCATCCGGAGCCTGCGGCTGCGGGAGCTGCAGAAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR TCA 72 bp TGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTaGCAGCCTAATTCTGGGGCTCCCTCCCATCAGCCA +
Preference number: 3 (lower is better)
Translates to: WWLPKPAEWVPQ*QPNSGAPSHQP
Trigger: TGGCTGATGGGAGGGAGCCCCAGAATTAGGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR CAA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCCGCTTCCTGCAGGTCTaGCTCAGGGTCCAAGGGCTC +
Preference number: 3 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTRFLQV*LRVQGL
Trigger: GAGCCCTTGGACCCTGAGCAAGACCTGCAGGAAGCG...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR CAA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCGTGTGTCTCACGTGTTaGGGCAATTGGCCCAGCCAC +
Preference number: 3 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTVCLTC*GNWPSH
Trigger: GTGGCTGGGCCAATTGCCCAAACACGTGAGACACAC...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTCCTCAGTCCACTCTTTaGAAAATGGGTGTGGCCCTT +
Preference number: 3 (lower is better)
Translates to: PHSKELWPLGRQRADHLLPQSTL*KMGVAL
Trigger: AAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGG...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAGTGTGTCTCACGTGTTaGGGCAATTGGCCCAGCCAC +
Preference number: 3 (lower is better)
Translates to: QSRGTACGHSPPELTCIQVCLTC*GNWPSH
Trigger: GTGGCTGGGCCAATTGCCCAAACACGTGAGACACAC...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR TCA 72 bp ATGCACCCAGCTAGGCTCTGTGAACTAAGGTCGGGATaGACCCTTAAGTCTCCTGCTCCCGAGGAGGCCTCA +
Preference number: 3 (lower is better)
Translates to: MHPARLCELRSG*TLKSPAPEEAS
Trigger: TGAGGCCTCCTCGGGAGCAGGAGACTTAAGGGTTCATCCCGACCTTAGTTCACAGAGCCTAGCTGGGTGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR CCA 72 bp ATAAAGCTCCCTGTGTGTCTCACGTGTTTGGGCAATTaGCCCAGCCACCTCTATGTGGAGGGAGGCCTGCTG +
Preference number: 3 (lower is better)
Translates to: IKLPVCLTCLGN*PSHLYVEGGLL
Trigger: CAGCAGGCCTCCCTCCACATAGAGGTGGCTGGGCCAATTGCCCAAACACGTGAGACACACAGGGAGCTTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR CCA 72 bp CCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTaGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACA +
Preference number: 3 (lower is better)
Translates to: PLDKDLFGAKMQ*VSLEAAQPWHT
Trigger: TGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR CCA 72 bp AACTCGATGTGCTGGTCCGTCTCCATCAGCCCCACTTaGTACATGGTGTGGGCCTTGAGGAACTCGAGGTTG +
Preference number: 3 (lower is better)
Translates to: NSMCWSVSISPT*YMVWALRNSRL
Trigger: CAACCTCGAGTTCCTCAAGGCCCACACCATGTACCAAGTGGGGCTGATGGAGACGGACCAGCACATCGAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR CCA 72 bp CCATCTTTGCAGGGGCAGGTGAACGGGATGCGCTCCTaGTTGCAGGCAAACTTGATGAACTTGCACAGCTCC +
Preference number: 3 (lower is better)
Translates to: PSLQGQVNGMRS*LQANLMNLHSS
Trigger: GGAGCTGTGCAAGTTCATCAAGTTTGCCTGCAACCAGGAGCGCATCCCGTTCACCTGCCCCTGCAAAGATGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR TCA 72 bp TGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTaGGCCTGGAGGCAGCTCAGCCCTGGCATACACACT +
Preference number: 3 (lower is better)
Translates to: WTKTYLGQRCSG*AWRQLSPGIHT
Trigger: AGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR TCA 72 bp GGTCAGGATATACTTGCCCTTGTTCTTATTGACAGCTaGGCTGGGGCACAGCAGCAGCAGCGACAGCGAGGA +
Preference number: 3 (lower is better)
Translates to: GQDILALVLIDS*AGAQQQQRQRG
Trigger: TCCTCGCTGTCGCTGCTGCTGCTGTGCCCCAGCTCAGCTGTCAATAAGAACAAGGGCAAGTATATCCTGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR GCA 72 bp CTGGAATGTGGACGAAAGTTTGGAAAAGCAAAATGTTaGCAACTCCTCACGCAGGGCCCTGGAGGGACGGGC +
Preference number: 3 (lower is better)
Translates to: LECGRKFGKAKC*QLLTQGPGGTG
Trigger: GCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTTCGTCCACATTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR GCA 72 bp CAGCGGGCTGACCATCTTCTTTCAAAGCAGGGGAACTaGTTGCGGGCACTCACCTCCAGAGTTGACTTGCAT +
Preference number: 3 (lower is better)
Translates to: QRADHLLSKQGN*LRALTSRVDLH
Trigger: ATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTGAAAGAAGATGGTCAGCCCGCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCTGGAAAAGCAAAATGTaGCCAACTCCTCACGCAGGG +
Preference number: 3 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTWKSKM*PTPHAG
Trigger: CCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCA...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGGTGTGGCCGAGGTCATaGTACCCCCGGCTTCCTGCT +
Preference number: 3 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKVWPRS*YPRLPA
Trigger: AGCAGGAAGCCGGGGGTACAATGACCTCGGCCACAC...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCGTGTGTCTCACGTGTTaGGGCAATTGGCCCAGCCAC +
Preference number: 3 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSVCLTC*GNWPSH
Trigger: GTGGCTGGGCCAATTGCCCAAACACGTGAGACACAC...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTATGGACAAAGACCTATTaGGGGCAAAGATGCAGTGGG +
Preference number: 3 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLWTKTY*GQRCSG
Trigger: CCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCA...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR TCA 72 bp GCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTaGCTTGCATCCAATACAACTGATGCAGCTGTCATG +
Preference number: 3 (lower is better)
Translates to: AGELLAGTHLQS*LASNTTDAAVM
Trigger: CATGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGGTGTGGCCGAGGTCATaGTACCCCCGGCTTCCTGCT +
Preference number: 3 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTVWPRS*YPRLPA
Trigger: AGCAGGAAGCCGGGGGTACAATGACCTCGGCCACAC...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGACACGTGTTTGGGCAATaGGCCCAGCCACCTCTATGT +
Preference number: 3 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGHVFGQ*AQPPLC
Trigger: ACATAGAGGTGGCTGGGCCAATTGCCCAAACACGTG...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATGGACAAAGACCTATTaGGGGCAAAGATGCAGTGGG +
Preference number: 3 (lower is better)
Translates to: QSRGTACGHSPPELTCIQWTKTY*GQRCSG
Trigger: CCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCA...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGCCTTGGGTGGGCCTGTaGCTCCAGAGGAGCCCTGCC +
Preference number: 3 (lower is better)
Translates to: VCTHVSVYMSREKSGRREPWVGL*LQRSPA
Trigger: GGCAGGGCTCCTCTGGAGCAACAGGCCCACCCAAGG...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
3UTR GCA 72 bp TTAGGGCCAAGGTTTGGATCTGTCTGGACCTCAATGTaGTCTCGGAGAAGCAGCCACGTTAGCAGCAGATAC +
Preference number: 3 (lower is better)
Translates to: LGPRFGSVWTSM*SRRSSHVSSRY
Trigger: GTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGACAGATCCAAACCTTGGCCCTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGCACGTGTTTGGGCAATaGGCCCAGCCACCTCTATGT +
Preference number: 3 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRHVFGQ*AQPPLC
Trigger: ACATAGAGGTGGCTGGGCCAATTGCCCAAACACGTG...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAGGGGTCAGGATATACTaGCCCTTGTTCTTATTGACA +
Preference number: 3 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLGVRIY*PLFLLT
Trigger: TGTCAATAAGAACAAGGGCAAGTATATCCTGACCCC...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR CAA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAAGCTCGGTCTCATCATaGATGCTCTCAAACTTCTTG +
Preference number: 3 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLSSVSS*MLSNFL
Trigger: CAAGAAGTTTGAGAGCATCAATGATGAGACCGAGCT...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR CAA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTTACATGGTGTGGGCCTaGAGGAACTCGAGGTTGATG +
Preference number: 3 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTYMVWA*RNSRLM
Trigger: CATCAACCTCGAGTTCCTCAAGGCCCACACCATGTA...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR-3UTR CAA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCTGGAAAAGCAAAATGTaGCCAACTCCTCACGCAGGG +
Preference number: 3 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSWKSKM*PTPHAG
Trigger: CCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCA...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATCCTCAGTCCACTCTTTaGAAAATGGGTGTGGCCCTT +
Preference number: 3 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYPQSTL*KMGVAL
Trigger: AAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGG...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTCACTCACCTCCAGAGTaGACTTGCATCCAATACAAC +
Preference number: 3 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLHSPPE*TCIQYN
Trigger: GTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTG...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR CCA 72 bp AGTCTTCCAGGAGGCCCTGGAATGTGGACGAAAGTTTaGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGG +
Preference number: 3 (lower is better)
Translates to: SLPGGPGMWTKV*KSKMLPTPHAG
Trigger: CCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTTCGTCCACATTCCAGGGCCTCCTGGAAGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTCAAGCATGCCAGCCTTaGAACTTGCTCAGCAAGAGT +
Preference number: 3 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACQACQP*NLLSKS
Trigger: ACTCTTGCTGAGCAAGTTCAAAGGCTGGCATGCTTG...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR TCA 72 bp AGCAGCAGATACCTTACAGCTTGTCATCTACTCAAGTaGTGGCCAACAGAAGCTTCTGAACTCCTCCTGGGG +
Preference number: 3 (lower is better)
Translates to: SSRYLTACHLLK*WPTEASELLLG
Trigger: CCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGATGACAAGCTGTAAGGTATCTGCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACATGGAAAAGCAAAATGTaGCCAACTCCTCACGCAGGG +
Preference number: 3 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTWKSKM*PTPHAG
Trigger: CCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCA...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCCTCAGTCCACTCTTTaGAAAATGGGTGTGGCCCTT +
Preference number: 3 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAPQSTL*KMGVAL
Trigger: AAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGG...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGTGGACAAAGACCTATTaGGGGCAAAGATGCAGTGGG +
Preference number: 3 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTWTKTY*GQRCSG
Trigger: CCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCA...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp TGGTTAGGATCACATCCCGTAGCTGGGAGAGTCCACTGTTTCTCTCTCCTTCTGGGCAAATTTGATCTTTaGGAGCCATCAACAACTGCC +
Preference number: 3 (lower is better)
Translates to: WLGSHPVAGRVHCFSLLLGKFDL*EPSTTA
Trigger: GGCAGTTGTTGATGGCTCCAAAAGATCAAATTTGCC...CAGAAGGAGAGAGAAACAGTGGACTCTCCCAGCTACGGGATGTGATCCTAACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550724.2
3UTR-3UTR CAA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGGGCACATCTTCTTTCTaGGACCAGCATCCACACTCC +
Preference number: 3 (lower is better)
Translates to: GILSIMVLDAFPKSYREEGTSSF*DQHPHS
Trigger: GGAGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCC...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATGGCACATCTTCTTTCTaGGACCAGCATCCACACTCC +
Preference number: 3 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNGTSSF*DQHPHS
Trigger: GGAGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCC...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGACCTCCAGAGTTGACTaGCATCCAATACAACTGATG +
Preference number: 3 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLTSRVD*HPIQLM
Trigger: CATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGT...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACAATGTGGACGAAAGTTaGGAAAAGCAAAATGTTGCC +
Preference number: 3 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDNVDES*EKQNVA
Trigger: GGCAACATTTTGCTTTTCCAAACTTTCGTCCACATT...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR TCA 72 bp CAGCTGGGGCCTTATGGCATTAGAATCTGGTGGCCATaGGGGACAATGTCCAAGAAGATCAAATTAGACACA +
Preference number: 3 (lower is better)
Translates to: QLGPYGIRIWWP*GTMSKKIKLDT
Trigger: TGTGTCTAATTTGATCTTCTTGGACATTGTCCCTCATGGCCACCAGATTCTAATGCCATAAGGCCCCAGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGACCTCCAGAGTTGACTaGCATCCAATACAACTGATG +
Preference number: 3 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTTSRVD*HPIQLM
Trigger: CATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGT...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATCAGATACCTTACAGCTaGTCATCTACTCAAGTGATG +
Preference number: 3 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNQIPYS*SSTQVM
Trigger: CATCACTTGAGTAGATGACAAGCTGTAAGGTATCTG...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR-3UTR CAA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAAATGTGGACGAAAGTTaGGAAAAGCAAAATGTTGCC +
Preference number: 3 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTNVDES*EKQNVA
Trigger: GGCAACATTTTGCTTTTCCAAACTTTCGTCCACATT...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCCCCCGAGGATCTCGCTaGGCAGCTCGGCCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTAPRGSR*AARPGR
Trigger: CCGACCTGGCCGAGCTGCCCAGCGAGATCCTCGGGG...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTCCAGGCTGCCCAGGCTaGCCAGGCTGCCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLPGCPG*PGCRCC
Trigger: GCAGCACCGGCAGCCTGGGCAGCCTGGGCAGCCTGG...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTGTGCCGGCCCCGGCTaGACAGCTCCACCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALCAGPG*TAPPPR
Trigger: GCGAGGAGGTGGAGCTGTGCAGCCGGGGCCGGCACA...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GCAGTGTCGGGACCCCCATCTTTGCAGGGGCAGGTGAACGGGATGCGCTCCTGGGTGCAAGCCCAGTGTTaGCTGGGGACGCGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: AVSGPPSLQGQVNGMRSWVQAQC*LGTRPA
Trigger: CGCGGGACGCGTCCCCAGCCAACACTGGGCTTGCAC...CCAGGAGCGCATCCCGTTCACCTGCCCCTGCAAAGATGGGGGTCCCGACACTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCACGGTGCGGGAAGACTaGCGCTTGCCCGACGAGGAG +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTATVRED*RLPDEE
Trigger: CTCCTCGTCGGGCAAGCGCCAGTCTTCCCGCACCGT...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTGCCCATGGCCCCGGCTaGAGGCTTGGCGCTGAGGAG +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCAHGPG*RLGAEE
Trigger: CTCCTCAGCGCCAAGCCTTCAGCCGGGGCCATGGGC...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377560.9
CDS-3UTR TCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCGGCAGCAAGCGTTGCTaGCGGGGAGGCTCTATACCG +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTAGSKRC*RGGSIP
Trigger: CGGTATAGAGCCTCCCCGTCAGCAACGCTTGCTGCC...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGGGAGCCGTGCGGGTGTaGTGGCGAGGTGGCGGCATA +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALGAVRV*WRGGGI
Trigger: TATGCCGCCACCTCGCCATCACACCCGCACGGCTCC...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCTGCTGGGTGGTTCTGTaGTGGGGAACCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTACWVVL*WGTSWG
Trigger: GCCCCAGCTGGTTCCCCATCACAGAACCACCCAGCA...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CTTGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCCACCTCCTCGATGGGCACGTCTaGGGGCGCAGGAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: LVLPRHKDVPAPAAQLHLLDGHV*GRRSSQ
Trigger: CTGACTGCTCCTGCGCCCTCAGACGTGCCCATCGAG...GAGGTGGAGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCAGATGCCCTGCGAGCTaGAGATGGAGGCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTARCPAS*RWRPGW
Trigger: CCAGCCAGGCCTCCATCTGCAGCTCGCAGGGCATCT...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCCACCTCCTCGCCAGGCTGCCGGTGCTaGACAGGGAAATGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: FSHATRMCRPRLHSSTSSPGCRC*TGKCPG
Trigger: GCCTGGACATTTCCCTGTGCAGCACCGGCAGCCTGG...CGAGGAGGTGGAGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp CTTGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCCACCTCGGCAGGCATCGGCGATaGCGTCACTCGTCACGCCCA +
Preference number: 4 (lower is better)
Translates to: LVLPRHKDVPAPAAQLHLGRHRR*RHSSRP
Trigger: TGGGCGTGACGAGTGACGCCATCGCCGATGCCTGCC...GAGGTGGAGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACAAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGGGGTACGGGGGCACATaGGCAGTGTCGGGACCCCCA +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALGYGGT*AVSGPP
Trigger: TGGGGGTCCCGACACTGCCCATGTGCCCCCGTACCC...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTCCCGCAGGCGCCGCCTaGGACCCAGTTCTGCGTCTC +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFPAGAA*DPVLRL
Trigger: GAGACGCAGAACTGGGTCTCAGGCGGCGCCTGCGGG...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTGCTGCCTCCGATGCTaGGCACGGTGGGGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALCCLRC*ARWGPS
Trigger: ACTCGGACCCCACCGTGCTCAGCATCGGAGGCAGCA...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTTGGAGGCGGAGGCGCTaGTGCTCATGGCGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCWRRRR*CSWRGS
Trigger: TGACCCCCGCCATGAGCATCAGCGCCTCCGCCTCCA...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTCCAGTGGGTCCAAGGTaGTCTCAGGGGCCGCGTGGT +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGPVGPR*SQGPRG
Trigger: ACCACGCGGCCCCTGAGATCACCTTGGACCCACTGG...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTGCGGGGTGCCGCCTCTaGTCCAGGGTGTGCACCGTG +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSAGCRL*SRVCTV
Trigger: CACGGTGCACACCCTGGAGCAGAGGCGGCACCCCGC...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGCACCGAGGCCGTCTCTaGATTGTCCAGGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALHRGRL*IVQGLP
Trigger: GGGGAGCCCCTGGACAATGCAGAGACGGCCTCGGTG...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CTTGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCCACCTCATGGGGATGGAGCCGTaGGGGTGTGATGGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: LVLPRHKDVPAPAAQLHLMGMEP*GCDGEV
Trigger: CACCTCGCCATCACACCCGCACGGCTCCATCCCCAT...GAGGTGGAGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACAAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTAAGGAGCTGCTGCGGTaGCTGGTCACGTGGCGACGC +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGKELLR*LVTWRR
Trigger: GCGTCGCCACGTGACCAGCCACCGCAGCAGCTCCTT...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATTGATGCTCACCCGGCCCTTGGCTaGCTGTCCCGGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LGGDLSAQGLQLGLIIDAHPALG*LSRRRW
Trigger: CCACCTCCTCCGGGACAGCCAGCCAAGGGCCGGGTG...AGCATCAATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp AGCGGGACGTCTGCCCGAATTGCAATCCCCAGCAGCTGCCCCAGGAAGTGCAGCAAGCCCAGTGTTGGCTaGGGACGCGTCCCGCGGGTA +
Preference number: 4 (lower is better)
Translates to: SGTSARIAIPSSCPRKCSKPSVG*GRVPRV
Trigger: TACCCGCGGGACGCGTCCCCAGCCAACACTGGGCTT...GCTGCACTTCCTGGGGCAGCTGCTGGGGATTGCAATTCGGGCAGACGTCCCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGGGCAGGCATCGGCGATaGCGTCACTCGTCACGCCCA +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALGRHRR*RHSSRP
Trigger: TGGGCGTGACGAGTGACGCCATCGCCGATGCCTGCC...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCCCGTCAGAACCTCTCTaGCTCCGGGCACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTAPSEPL*LRAPAS
Trigger: AGAAGCTGGTGCCCGGAGCCAGAGAGGTTCTGACGG...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCTCCAGGTACACCTCATaGGGATGGAGCCGTGCGGGT +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTASRYTS*GWSRAG
Trigger: ACCCGCACGGCTCCATCCCCATGAGGTGTACCTGGA...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGGCCGCAGGCTCCGGATaGCTGCCGCGTAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALAAGSG*LPRRCP
Trigger: AGGACATCTACGCGGCAGCCATCCGGAGCCTGCGGC...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTGGGTACGGGGGCACATaGGCAGTGTCGGGACCCCCA +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSGYGGT*AVSGPP
Trigger: TGGGGGTCCCGACACTGCCCATGTGCCCCCGTACCC...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGAGGGACGGGCCGCAGTaGTGGCTTCCCAAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALRDGPQ*WLPKPA
Trigger: TGCTGGCTTGGGAAGCCACCACTGCGGCCCGTCCCT...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTGCAATGGGAGGCGGGTaGGGGTCTGGGCCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSAMGGG*GSGPEV
Trigger: CACCTCTGGCCCAGACCCTCACCCGCCTCCCATTGC...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CTTGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCCACCTCTCGGGGCGAAGATATTaGGCAGGGCCATGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: LVLPRHKDVPAPAAQLHLSGRRY*AGPCGS
Trigger: ACTGCCGCATGGCCCTGCTCAATATCTTCGCCCCGA...GAGGTGGAGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGCTTTGCAGGGGCAGGTaGACGGGATGCGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALLCRGR*TGCAPG
Trigger: ACCAGGAGCGCATCCCGTTCACCTGCCCCTGCAAAG...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTGAGGAGGCCCCCACCTaGGCATTGTCCCCCATCTCT +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGEEAPT*ALSPIS
Trigger: AGAGATGGGGGACAATGCTCAGGTGGGGGCCTCCTC...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GCAGTGTCGGGACCCCCATCTTTGCAGGGGCAGGTGAACGGGATGCGCTCCTGGCACACTTACATGGGGTaGTGGGGAGTGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: AVSGPPSLQGQVNGMRSWHTYMG*WGVLGG
Trigger: CCCACCCAGCACTCCCCATCACCCCATGTAAGTGTG...CCAGGAGCGCATCCCGTTCACCTGCCCCTGCAAAGATGGGGGTCCCGACACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCTTCCAGGACAGCAGCTaGTCTGCGAAGGCCATAGCC +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTAFQDSS*SAKAIA
Trigger: GGCTATGGCCTTCGCAGAGCAGCTGCTGTCCTGGAA...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGCTCTGCTCCAGGGTGTaGACCGTGCGCAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALLCSRV*TVRRSS
Trigger: AGAGCTCCTGCGCACGGTGCACACCCTGGAGCAGAG...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGGGAAAGAGCCGCTGGTaGCATGGACCTCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALGKSRW*HGPPRQ
Trigger: CTGGCGAGGAGGTCCATGGCACCAGCGGCTCTTTCC...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTAGGGGAGGCCGCAGGTaGGCAGCTCCATCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSRGGRR*AAPSPV
Trigger: CACTGGAGATGGAGCTGCGCACCTGCGGCCTCCCCT...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTAGCTGCTGCGGTGGCTaGTCACGTGGCGACGCCTCT +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSSCCGG*SRGDAS
Trigger: AGAGGCGTCGCCACGTGACCAGCCACCGCAGCAGCT...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AGATGTCCTTGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTAGTACACCCGGCCCTTaGCTGGCTGTCCCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: RCPCSPTPQGCAGPGCTASTPGP*LAVPEE
Trigger: CTCCTCCGGGACAGCCAGCCAAGGGCCGGGTGTACT...AGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACAAGGACATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp GCAGTGTCGGGACCCCCATCTTTGCAGGGGCAGGTGAACGGGATGCGCTCCTGGAGCAATCCGGCATGGTaGCCCATGAGTGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: AVSGPPSLQGQVNGMRSWSNPAW*PMSAWV
Trigger: GACCCAGGCACTCATGGGCCACCATGCCGGATTGCT...CCAGGAGCGCATCCCGTTCACCTGCCCCTGCAAAGATGGGGGTCCCGACACTGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTGGCAGCAATCCGGCATaGTGGCCCATGAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGGSNPA*WPMSAW
Trigger: CCAGGCACTCATGGGCCACCATGCCGGATTGCTGCC...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCCACCTCCTCGTCTGATGGGCTTCGCTaGTGTCAGGCTCAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: FSHATRMCRPRLHSSTSSSDGLR*CQAQRL
Trigger: CAGACGCTGAGCCTGACACCAGCGAAGCCCATCAGA...CGAGGAGGTGGAGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTCCGTGGCCAGGTGCTaGGAGGCGATCTCAGCGCAC +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLSVARC*EAISAH
Trigger: GTGCGCTGAGATCGCCTCCCAGCACCTGGCCACGGA...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GCAGTGTCGGGACCCCCATCTTTGCAGGGGCAGGTGAACGGGATGCGCTCCTGGGGGGCAAAGATGCAGTaGGTGAGCCTGGAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: AVSGPPSLQGQVNGMRSWGAKMQ*VSLEAA
Trigger: AGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCC...CCAGGAGCGCATCCCGTTCACCTGCCCCTGCAAAGATGGGGGTCCCGACACTGC
64% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp AGATGTCCTTGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTAGGATGGGCCAGGGCTaGCACTCTGGGCAGGTTCGC +
Preference number: 4 (lower is better)
Translates to: RCPCSPTPQGCAGPGCTARMGQG*HSGQVR
Trigger: GCGAACCTGCCCAGAGTGCCAGCCCTGGCCCATCCT...AGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACAAGGACATCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCATGAGTGCCTGGGTCTaGTGCAATACTGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTAMSAWV*CNTGAS
Trigger: GCTGGCACCAGTATTGCATCAGACCCAGGCACTCAT...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCCGACTGCGAAGCCTTTaGTGGGGCGGGCGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTRLRSL*WGGRRG
Trigger: CCCTCGCCGCCCGCCCCATCAAAGGCTTCGCAGTCG...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGCACACTTACATGGGGTaGTGGGGAGTGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALHTYMG*WGVLGG
Trigger: CCCACCCAGCACTCCCCATCACCCCATGTAAGTGTG...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCAGCAATTCCCGCATGTaGACCAGTGCCTGCTTGCGA +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTASNSRM*TSACLR
Trigger: TCGCAAGCAGGCACTGGTGCACATGCGGGAATTGCT...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTCTCCCAGCCAATTCCTaGCACGTCACCGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCLPANS*HVTGGE
Trigger: CTCTCCCCCGGTGACGTGGCAGGAATTGGCTGGGAG...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTCTCTGCTCCAGGGTGTaGACCGTGCGCAGGAGCTCT +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSLCSRV*TVRRSS
Trigger: AGAGCTCCTGCGCACGGTGCACACCCTGGAGCAGAG...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GCAGTGTCGGGACCCCCATCTTTGCAGGGGCAGGTGAACGGGATGCGCTCCTGGGATGAGCAGGGTGAGTaGGCGGTGGAACCACAGCAT +
Preference number: 4 (lower is better)
Translates to: AVSGPPSLQGQVNGMRSWDEQGE*AVEPQH
Trigger: ATGCTGTGGTTCCACCGCGCACTCACCCTGCTCATC...CCAGGAGCGCATCCCGTTCACCTGCCCCTGCAAAGATGGGGGTCCCGACACTGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTCCAGGCTGCCCAGGCTaGCGGTGCTGCACAGGGAAA +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFPGCPG*RCCTGK
Trigger: TTTCCCTGTGCAGCACCGGCAGCCTGGGCAGCCTGG...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTCTCTCCGTGGCCAGGTaGTGGGAGGCGATCTCAGCG +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSLSVAR*WEAISA
Trigger: CGCTGAGATCGCCTCCCAGCACCTGGCCACGGAGAG...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AGATGTCCTTGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTACGCACTCCACATTCTaGAGCTCCCGCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: RCPCSPTPQGCAGPGCTATHSTF*SSRSRR
Trigger: CCTGCGGCTGCGGGAGCTGCAGAATGTGGAGTGCGT...AGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACAAGGACATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTAGCTGCTGCGGTGGCTaGTCACGTGGCGACGCCTCT +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSSCCGG*SRGDAS
Trigger: AGAGGCGTCGCCACGTGACCAGCCACCGCAGCAGCT...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGGGCGATCTTGGAAGCTaGGTCGCTGGGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALGDLGS*VAGILL
Trigger: CAGGAGGATCCCAGCGACCCAGCTTCCAAGATCGCC...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTGGCAGCAATCCGGCATaGTGGCCCATGAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCGSNPA*WPMSAW
Trigger: CCAGGCACTCATGGGCCACCATGCCGGATTGCTGCC...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTATTGTTGCTGAGCGGTaGCCACGGCAGCAATCCGGC +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGIVAER*PRQQSG
Trigger: GCCGGATTGCTGCCGTGGCCACCGCTCAGCAACAAT...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCACCCCCAGTTTGATGTaGACCCTGTCTGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTATPSLM*TLSVER
Trigger: CCTCTCCACAGACAGGGTCCACATCAAACTGGGGGT...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CTTGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCCACCTCTACACCTCATGGGGATaGAGCCGTGCGGGTGTGATG +
Preference number: 4 (lower is better)
Translates to: LVLPRHKDVPAPAAQLHLYTSWG*SRAGVM
Trigger: CATCACACCCGCACGGCTCCATCCCCATGAGGTGTA...GAGGTGGAGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp CCAGGTGCTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATTCCAGGTACACCTCATaGGGATGGAGCCGTGCGGGT +
Preference number: 4 (lower is better)
Translates to: PGAGRRSQRTGPPARSHHSRYTS*GWSRAG
Trigger: ACCCGCACGGCTCCATCCCCATGAGGTGTACCTGGA...ATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAGCACCTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTCACGAGCGCTCTGTGTaGCCGAGGTCATTGTACCCC +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGHERSV*PRSLYP
Trigger: GGGGTACAATGACCTCGGCCACACAGAGCGCTCGTG...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGGCAGATAGGGAGGTATaGGAGGGGCAGGGGAACCAC +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALADREV*EGQGNH
Trigger: GTGGTTCCCCTGCCCCTCCCATACCTCCCTATCTGC...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATTGATGCTCAGGGGCCTGGACCCTaGAACCCCAGCTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: LGGDLSAQGLQLGLIIDAQGPGP*NPSWLH
Trigger: ATGCAGCCAGCTGGGGTTCCAGGGTCCAGGCCCCTG...AGCATCAATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTACTGGGCTGCGATGGTaGCATGCAGCAACAGCTCGG +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLTGLRW*HAATAR
Trigger: CCGAGCTGTTGCTGCATGTCACCATCGCAGCCCAGT...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTGGATCGAGCTGGAGCTaGTGGTGCCGTCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFGSSWS*WCRLGE
Trigger: CTCTCCCAGACGGCACCATCAGCTCCAGCTCGATCC...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTAGGAGGACGAGTCACTaGGATTTGGGGCGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCRRTSH*DLGRSL
Trigger: CAGCGACCGCCCCAAATCTCAGTGACTCGTCCTCCT...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CAGCAGCGACAGCGAGGAACTCTGCAGCTCCTTACACACCTGCCACAGGAAGTGTGCTGCCTCCGATGCTaGGCACGGTGGGGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: QQRQRGTLQLLTHLPQEVCCLRC*ARWGPS
Trigger: ACTCGGACCCCACCGTGCTCAGCATCGGAGGCAGCA...CACTTCCTGTGGCAGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTCCACAGAGAGGTCGCTaGCGGTTTGGGAGATGCCCT +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSPQRGR*RFGRCP
Trigger: AGGGCATCTCCCAAACCGTCAGCGACCTCTCTGTGG...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GCAGTGTCGGGACCCCCATCTTTGCAGGGGCAGGTGAACGGGATGCGCTCCTGGGGTTGTCCAGGGAAGTaGCTGTGTACATGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: AVSGPPSLQGQVNGMRSWGCPGK*LCTWSP
Trigger: TGGGCTCCATGTACACAGTCACTTCCCTGGACAACC...CCAGGAGCGCATCCCGTTCACCTGCCCCTGCAAAGATGGGGGTCCCGACACTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCTTTGCAGGGGCAGGTaGACGGGATGCGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWLCRGR*TGCAPG
Trigger: ACCAGGAGCGCATCCCGTTCACCTGCCCCTGCAAAG...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTCTTTGCAGGGGCAGGTaGACGGGATGCGCTCCTGGT +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSLCRGR*TGCAPG
Trigger: ACCAGGAGCGCATCCCGTTCACCTGCCCCTGCAAAG...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGGTGGAGGCGCTCTGCTaGAAGCACGAGCGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWVEALC*KHERSV
Trigger: CACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCAC...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGCGAGGAGGCCTCAGATaGAAACTGTCAGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALRGGLR*KLSDQG
Trigger: GCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCG...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTGCACTTCTGGTCTGGTaGACCACACGGGGAACAGCC +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSALLVW*TTRGTA
Trigger: GGCTGTTCCCCGTGTGGTGCACCAGACCAGAAGTGC...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTAGCAGGATCCGCCTCTaGCGCTCGGCAACCAACTGT +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLSRIRL*RSATNC
Trigger: ACAGTTGGTTGCCGAGCGGCAGAGGCGGATCCTGCT...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377560.9
CDS-3UTR GCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTGGCGCTTGCTCAGGTTaGTGCAACAAGCCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCGACSG*CNKPWR
Trigger: ACGCCAGGGCTTGTTGCAGCAACCTGAGCAAGCGCC...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGACAGGTCAGCAGCATTaGGGTGGGCCTGCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWTGQQH*GGPALP
Trigger: CGGAAGGGCAGGCCCACCGCAATGCTGCTGACCTGT...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CTTGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCCACCTCTGGTCCGCTGTCCTCTaGACAGTGGCATTCAGCACT +
Preference number: 4 (lower is better)
Translates to: LVLPRHKDVPAPAAQLHLWSAVL*TVAFST
Trigger: AGTGCTGAATGCCACTGTGCAGAGGACAGCGGACCA...GAGGTGGAGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTGACGTCTGCCCGAATTaGAATCCCCAGCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCDVCPN*NPQQLP
Trigger: GGGCAGCTGCTGGGGATTGCAATTCGGGCAGACGTC...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTGGGCAGCGGGACGTCTaGCCGAATTGCAATCCCCAG +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFGQRDV*PNCNPQ
Trigger: CTGGGGATTGCAATTCGGGCAGACGTCCCGCTGCCC...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTAGCAGGGGAACTGCTTaGGGGCACTCACCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLSRGTA*GHSPPE
Trigger: CTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCT...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGGGGCACAGCAGCAGCAGCGACAGCGAGGAACTCTGCAGCTCCTTACACACCTGCAGGTTCGCTGTGGTaGCATGGACCTCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: WGTAAAATARNSAAPYTPAGSLW*HGPPRQ
Trigger: CTGGCGAGGAGGTCCATGGCACCACAGCGAACCTGC...AGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCTGCTGCTGCTGTGCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTCCTGCACTTCTGGTCTaGTGCACCACACGGGGAACA +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGPALLV*CTTRGT
Trigger: TGTTCCCCGTGTGGTGCACCAGACCAGAAGTGCAGG...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTAACAGCCTGCACTTCTaGTCTGGTGCACCACACGGG +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGNSLHF*SGAPHG
Trigger: CCCGTGTGGTGCACCAGACCAGAAGTGCAGGCTGTT...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCGCCAAAGGCTTCCTaGACCTGCTCGACCATCCCA +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGSPKAS*TCSTIP
Trigger: TGGGATGGTCGAGCAGGTCCAGGAAGCCTTTGGCGA...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCAGACTAAGGACATCCTaGAGCGCGTCATTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTARLRTS*SASFPA
Trigger: TGCTGGGAATGACGCGCTCCAGGATGTCCTTAGTCT...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTTTGGAGACGGGCGTTaGTCAAGCAGCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGFGDGR*SSSRER
Trigger: CCTCTCCCTGCTGCTTGACCAACGCCCGTCTCCAAA...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAACACCCGGCCCTTGGCTaGCTGTCCCGGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQHPALG*LSRRRW
Trigger: CCACCTCCTCCGGGACAGCCAGCCAAGGGCCGGGTG...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCGTGCAAGCCCAGTGTTaGCTGGGGACGCGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTVQAQC*LGTRPA
Trigger: CGCGGGACGCGTCCCCAGCCAACACTGGGCTTGCAC...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTGTGGACCCTGTCTGTaGAGAGGACCACAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGCGPCL*RGPQRG
Trigger: ACCCCTCTGTGGTCCTCTCCACAGACAGGGTCCACA...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAACCAGCAAGCGGCTGTaGGCGGTGGGGCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQTSKRL*AVGPTR
Trigger: CCTGGTGGGCCCCACCGCCCACAGCCGCTTGCTGGT...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAGCAGCGACAGCGAGGAACTCTGCAGCTCCTTACACACCTGCCACAGGAAGTGTTGAAGACCCCGCCGTaGGCGTTGCAGGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: QQRQRGTLQLLTHLPQEVLKTPP*ALQALR
Trigger: CCGCAAGGCCTGCAACGCCCACGGCGGGGTCTTCAA...CACTTCCTGTGGCAGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCTGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCTGGCTGGACACCGCGTaGGGCTCCAACAGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTWLDTA*GSNRPG
Trigger: TCCGGGCCTGTTGGAGCCCCACGCGGTGTCCAGCCA...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AGCGGGACGTCTGCCCGAATTGCAATCCCCAGCAGCTGCCCCAGGAAGTGCAGCGGTGTGATGGCGAGGTaGCGGCATAGCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: SGTSARIAIPSSCPRKCSGVMAR*RHSWLM
Trigger: CATCAACCAGCTATGCCGCCACCTCGCCATCACACC...GCTGCACTTCCTGGGGCAGCTGCTGGGGATTGCAATTCGGGCAGACGTCCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTTCCAGGTACACCTCATaGGGATGGAGCCGTGCGGGT +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCSRYTS*GWSRAG
Trigger: ACCCGCACGGCTCCATCCCCATGAGGTGTACCTGGA...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AGATGTCCTTGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCTGAGGCCAGCTGCCTaGCAGCCTGACAGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: RCPCSPTPQGCAGPGCTALRPAA*QPDRSR
Trigger: CCTACTTCTGTCAGGCTGCCAGGCAGCTGGCCTCAG...AGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACAAGGACATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTCAGCTCCATCTCCAGTaGGCTGAGCATGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGQLHLQ*AEHGQQ
Trigger: CTGCTGACCATGCTCAGCCCACTGGAGATGGAGCTG...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATTGATGCTTGGGCAGGTTCGCTGTaGTGCCATGGACCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: LGGDLSAQGLQLGLIIDAWAGSL*CHGPPR
Trigger: GCGAGGAGGTCCATGGCACCACAGCGAACCTGCCCA...AGCATCAATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp AGATGTCCTTGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCCCTGGAACCCCAGCTaGCTGCATGACCTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: RCPCSPTPQGCAGPGCTAPWNPS*LHDLGK
Trigger: CTTCCCAAGGTCATGCAGCCAGCTGGGGTTCCAGGG...AGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACAAGGACATCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTACAAGCCCTGGCGTTTaGGCAGGGCCAAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGTSPGV*AGPKFP
Trigger: AGGAAACTTTGGCCCTGCTCAAACGCCAGGGCTTGT...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGACTGGGCTGCGATGGTaGCATGCAGCAACAGCTCGG +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWTGLRW*HAATAR
Trigger: CCGAGCTGTTGCTGCATGTCACCATCGCAGCCCAGT...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTGAGGACTTCATGGGATaGCTGGTCTTCCCGCTTGTG +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGEDFMG*LVFPLV
Trigger: CACAAGCGGGAAGACCAGTCATCCCATGAAGTCCTC...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTGGAGGTGCGAGGAGCTaGTTGGACAGCAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFGGARS*LDSSCR
Trigger: CCTGCAACTGCTGTCCAATCAGCTCCTCGCACCTCC...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CAGGGGCAGGTGAACGGGATGCGCTCCTGGTTGCAGGCAAACTTGATGAACTTGTGCGGATGGCGCCTCTaGCTACGCCCTCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QGQVNGMRSWLQANLMNLCGWRL*LRPRPG
Trigger: ACCTGGACGAGGGCGTAGTCAGAGGCGCCATCCGCA...CAAGTTCATCAAGTTTGCCTGCAACCAGGAGCGCATCCCGTTCACCTGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCCACAGAGAGGTCGCTaGCGGTTTGGGAGATGCCCT +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWPQRGR*RFGRCP
Trigger: AGGGCATCTCCCAAACCGTCAGCGACCTCTCTGTGG...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCGCTCAGCGTCTGCTCTaGATGGGCACAACTCTTAAA +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTAAQRLL*MGTTLK
Trigger: TTTAAGAGTTGTGCCCATTCAGAGCAGACGCTGAGC...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AGCGGGACGTCTGCCCGAATTGCAATCCCCAGCAGCTGCCCCAGGAAGTGCAGCCAGGGTCCACTTTCTTaGGGCCTTCTGTGCATGTCG +
Preference number: 4 (lower is better)
Translates to: SGTSARIAIPSSCPRKCSQGPLS*GLLCMS
Trigger: CGACATGCACAGAAGGCCTCAAGAAAGTGGACCCTG...GCTGCACTTCCTGGGGCAGCTGCTGGGGATTGCAATTCGGGCAGACGTCCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp CTTGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCCACCTCAGCGATGTGATTCTGTaGGACCTGGCAAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LVLPRHKDVPAPAAQLHLSDVIL*DLARPK
Trigger: TTTGGGCCTTGCCAGGTCTCACAGAATCACATCGCT...GAGGTGGAGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTCCCCAGCTGGCTGCATaGCCTTGGGAAGTGACTTGG +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFPQLAA*PWEVTW
Trigger: CCAAGTCACTTCCCAAGGTCATGCAGCCAGCTGGGG...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGAGTCGATCCATGAGCTaGACAAGGCCACTGCGTACC +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALSRSMS*TRPLRT
Trigger: GGTACGCAGTGGCCTTGTGCAGCTCATGGATCGACT...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTGACAGCAGTTGCAGGTaGTCCAGGGTAATGTCCCGG +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSDSSCR*SRVMSR
Trigger: CCGGGACATTACCCTGGAGCACCTGCAACTGCTGTC...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTGACAGCAGTTGCAGGTaGTCCAGGGTAATGTCCCGG +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLDSSCR*SRVMSR
Trigger: CCGGGACATTACCCTGGAGCACCTGCAACTGCTGTC...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGAGCAGCTCCACCACCTaGAGGAGGACGGATGTCGGA +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWSSSTT*RRTDVG
Trigger: TCCGACATCCGTCCTCCTGCAGGTGGTGGAGCTGCT...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATTGATGCTGGGAAGACTGGCGCTTaGCCGACGAGGAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: LGGDLSAQGLQLGLIIDAGKTGA*PTRRPF
Trigger: AAAAGGCCTCCTCGTCGGGCAAGCGCCAGTCTTCCC...AGCATCAATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCTCGGACATCGATGCATaGGCACCTCTCAAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTASDIDA*APLKVK
Trigger: CTTCACTTTGAGAGGTGCGCATGCATCGATGTCCGA...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AGATGTCCTTGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCAGGCTCCGGATGGCTaGCGCGTAGATGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: RCPCSPTPQGCAGPGCTAQAPDG*RVDVLV
Trigger: AACAAGGACATCTACGCGGCAGCCATCCGGAGCCTG...AGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACAAGGACATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACAGGGGAGGCCGCAGGTaGGCAGCTCCATCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDRGGRR*AAPSPV
Trigger: CACTGGAGATGGAGCTGCGCACCTGCGGCCTCCCCT...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CAGGGGCAGGTGAACGGGATGCGCTCCTGGTTGCAGGCAAACTTGATGAACTTGAGGGGAGGCCGCAGGTaGGCAGCTCCATCTCCAGTG +
Preference number: 4 (lower is better)
Translates to: QGQVNGMRSWLQANLMNLRGGRR*AAPSPV
Trigger: CACTGGAGATGGAGCTGCGCACCTGCGGCCTCCCCT...CAAGTTCATCAAGTTTGCCTGCAACCAGGAGCGCATCCCGTTCACCTGCCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp CTTGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCCACCTCAGCCAGCAGAGTGGGTaGCTCAGTGACAGCCTAATT +
Preference number: 4 (lower is better)
Translates to: LVLPRHKDVPAPAAQLHLSQQSG*LSDSLI
Trigger: AATTAGGCTGTCACTGAGGCACCCACTCTGCTGGCT...GAGGTGGAGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCGGAAAAGCAAAATGTTaGCAACTCCTCACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTAGKAKC*QLLTQG
Trigger: GCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCC...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATTGATGCTAGCAGGGGAACTGCTTaGGGGCACTCACCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: LGGDLSAQGLQLGLIIDASRGTA*GHSPPE
Trigger: CTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCT...AGCATCAATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGTGTCCGCGGCCTCTaGGGCCCCGAGGATCTCGCT +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTGVRGL*GPEDLA
Trigger: AGCGAGATCCTCGGGGCCCCAGAGGCCGCGGACACC...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGCAAAAAGAGATCGGGTaGCAGAGCTGCCTGATCCCC +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALQKEIG*QSCLIP
Trigger: GGGGATCAGGCAGCTCTGCCACCCGATCTCTTTTTG...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCAAGGAGCTGCTGCGGTaGCTGGTCACGTGGCGACGC +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTKELLR*LVTWRR
Trigger: GCGTCGCCACGTGACCAGCCACCGCAGCAGCTCCTT...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTGCAGGGAGAGGAGTTTaGACACACAAGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSAGRGV*THKLAG
Trigger: GCCAGCCAGCTTGTGTGTCCAAACTCCTCTCCCTGC...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTGGCTGGAGGACTTCATaGGATGACTGGTCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLGWRTS*DDWSSR
Trigger: GCGGGAAGACCAGTCATCCCATGAAGTCCTCCAGCC...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATTGATGCTATTGTTGCTGAGCGGTaGCCACGGCAGCAATCCGGC +
Preference number: 4 (lower is better)
Translates to: LGGDLSAQGLQLGLIIDAIVAER*PRQQSG
Trigger: GCCGGATTGCTGCCGTGGCCACCGCTCAGCAACAAT...AGCATCAATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACAAGCCCAGTGTTGGCTaGGGACGCGTCCCGCGGGTA +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDKPSVG*GRVPRV
Trigger: TACCCGCGGGACGCGTCCCCAGCCAACACTGGGCTT...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACCACGCCCAGCCCCTGTaGGTCCTTCCTGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDHAQPL*VLPGEV
Trigger: CACCTCACCAGGAAGGACCCACAGGGGCTGGGCGTG...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCGGGCCCACCAGGGCCTaGCAGGCATCGGCGATGGCG +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSGPTRA*QASAMA
Trigger: CGCCATCGCCGATGCCTGCCAGGCCCTGGTGGGCCC...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGACCAGCAAGCGGCTGTaGGCGGTGGGGCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTTSKRL*AVGPTR
Trigger: CCTGGTGGGCCCCACCGCCCACAGCCGCTTGCTGGT...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCGGAGACAGGCCACTCTaGGGTCAGCAGCATCCGCGG +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTGDRPL*GQQHPR
Trigger: CCGCGGATGCTGCTGACCCCAGAGTGGCCTGTCTCC...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTGTATACATGGGTGTCTaGCGCAGCTCCACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFVYMGV*RSSTRG
Trigger: GCCCCTGGTGGAGCTGCGCCAGACACCCATGTATAC...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTGCTGTGGGTATACATaGGTGTCTGGCGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALCCGYT*VSGAAP
Trigger: TGGAGCTGCGCCAGACACCCATGTATACCCACAGCA...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTAGGGCGGCGATGCTGTaGGTATACATGGGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCRAAML*VYMGVW
Trigger: CCAGACACCCATGTATACCCACAGCATCGCCGCCCT...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCGGCGGAAAGAGCCGCTaGTGCCATGGACCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTGGKSR*CHGPPR
Trigger: GCGAGGAGGTCCATGGCACCAGCGGCTCTTTCCGCC...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAGCCGCAGGCTCCGGATaGCTGCCGCGTAGATGTCCT +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLAAGSG*LPRRCP
Trigger: AGGACATCTACGCGGCAGCCATCCGGAGCCTGCGGC...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCAGGTGCTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATGATGTAGCGAGAGTCTaGGGAACCTGCTGTGCCATC +
Preference number: 4 (lower is better)
Translates to: PGAGRRSQRTGPPARSHHDVARV*GTCCAI
Trigger: GATGGCACAGCAGGTTCCCCAGACTCTCGCTACATC...ATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAGCACCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCGACGGGCCGCAGTGGTaGCTTCCCAAGCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTDGPQW*LPKPAE
Trigger: CTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCGTC...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGCTGGAGGGCAGGGCTaGCCACAGGCTTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDAGGQG*PQACLW
Trigger: CCACAGACAAGCCTGTGGCCAGCCCTGCCCTCCAGC...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTCCCTATGTGTAGGATaGGCCAGGGCTGGCACTCTG +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLSLCVG*ARAGTL
Trigger: CAGAGTGCCAGCCCTGGCCCATCCTACACATAGGGA...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAACCAGCTGCACTAGCTaGGGCATCAGGGCATCCGCC +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLTSCTS*GIRASA
Trigger: GGCGGATGCCCTGATGCCTCAGCTAGTGCAGCTGGT...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCGCTCGGCCAGGTCGGTaGCCCGGATCAGCCCGTCGT +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSARPGR*PGSARR
Trigger: ACGACGGGCTGATCCGGGTCACCGACCTGGCCGAGC...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATAGCAATGGGAGGCGGGTaGGGGTCTGGGCCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIAMGGG*GSGPEV
Trigger: CACCTCTGGCCCAGACCCTCACCCGCCTCCCATTGC...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTAGGCGAGTGAACAAGTaGGGCAACTTCGGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFRRVNK*GNFGAK
Trigger: CTTCGCCCCGAAGTTGCCTCACTTGTTCACTCGCCT...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACATTTGGGGCGGTCGCTaGGGTCACCCCACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDIWGGR*GHPTGC
Trigger: ACAGCCAGTGGGGTGACCTCAGCGACCGCCCCAAAT...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATATGGAGGCGGAGGCGCTaGTGCTCATGGCGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIWRRRR*CSWRGS
Trigger: TGACCCCCGCCATGAGCATCAGCGCCTCCGCCTCCA...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCACGACTGCGAAGCCTTTaGTGGGGCGGGCGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSRLRSL*WGGRRG
Trigger: CCCTCGCCGCCCGCCCCATCAAAGGCTTCGCAGTCG...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTGGCGGCATAGCTGGTTaGTGTACTGCACAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCGGIAG*CTAQVP
Trigger: TGGCACTTGTGCAGTACATCAACCAGCTATGCCGCC...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTGCCGGGCATAGGCATTaGTCTGATTCCCACAAACAG +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGAGHRH*SDSHKQ
Trigger: CTGTTTGTGGGAATCAGAGCAATGCCTATGCCCGGC...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACAGAAGGCTGGACACCTaGCGGGCCAGACCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDRRLDT*RARPEC
Trigger: GCACTCAGGTCTGGCCCGGCAGGTGTCCAGCCTTCT...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTCAAGGCGATCACTTCTaGAGCCATGCTGTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGQGDHF*SHAVCH
Trigger: GTGGCAAACAGCATGGCTGCAGAAGTGATCGCCTTG...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCTCCAAGTGCACACAGTaGGGCAACGGCCTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTSKCTQ*GNGLAC
Trigger: GCACGCCAGGCCGTTGCCGCACTGTGTGCACTTGGA...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTTTTGAAGCCTCCAAGTaGACACAGTGCGGCAACGGC +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSFEASK*TQCGNG
Trigger: GCCGTTGCCGCACTGTGTGCACTTGGAGGCTTCAAA...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CAGCAGCGACAGCGAGGAACTCTGCAGCTCCTTACACACCTGCCACAGGAAGTGCACCCGTGCCCACGGTaGCTTGTACAGAGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: QQRQRGTLQLLTHLPQEVHPCPR*LVQRGV
Trigger: GACTCCTCTCTGTACAAGGCACCGTGGGCACGGGTG...CACTTCCTGTGGCAGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCTGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp CTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATTGATGCTCTCCTTCACGCAGGCTaGCATGTCCGTGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: LGGDLSAQGLQLGLIIDALLHAG*HVRGPQ
Trigger: TTGTGGACCACGGACATGGCAGCCTGCGTGAAGGAG...AGCATCAATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTGCGGGGTGCCGCCTCTaGTCCAGGGTGTGCACCGTG +
Preference number: 4 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFAGCRL*SRVCTV
Trigger: CACGGTGCACACCCTGGAGCAGAGGCGGCACCCCGC...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTCCAGGCTGCCCAGGCTaGCCAGGCTGCCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACPGCPG*PGCRCC
Trigger: GCAGCACCGGCAGCCTGGGCAGCCTGGGCAGCCTGG...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCACCTTCACGGGGTGCTaGTCCTTCCCGGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTTFTGC*SFPALL
Trigger: CAGCAAGGCCGGGAAGGAGCAGCACCCCGTGAAGGT...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTTCAGCAGGGCGGCGATaGTGTGGGTATACATGGGTG +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSSAGRR*CGYTWV
Trigger: CACCCATGTATACCCACAGCATCGCCGCCCTGCTGA...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTGACAGCGAGGAACTCTaGAGCTCCTTACACACCTGC +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSDSEEL*SSLHTC
Trigger: GCAGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTC...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCTGTCTTCTCACCCCCTaGGGCTGGGATGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTCLLTP*GWDAPS
Trigger: GCTGGGTGCATCCCAGCCGCAGGGGGTGAGAAGACA...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGAACAGCCTGCACTTCTaGTCTGGTGCACCACACGGG +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWNSLHF*SGAPHG
Trigger: CCCGTGTGGTGCACCAGACCAGAAGTGCAGGCTGTT...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCCTTTATCATGATTCCTaGAGGCAGTCTGATCCGAGG +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTALYHDS*RQSDPR
Trigger: CCTCGGATCAGACTGCCTCCAGGAATCATGATAAAG...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTGTCAAGCTCAAAGGCTaGCAGTCACGAAGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGVKLKG*QSRRQF
Trigger: GAACTGCCTTCGTGACTGCCAGCCTTTGAGCTTGAC...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGGCAGGACACTGTAGGTaGGCTTGTCCCTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWAGHCR*ACPCCP
Trigger: AGGACAGCAGGGACAAGCCCACCTACAGTGTCCTGC...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTGCAGGACACTGTAGGTaGGCTTGTCCCTGCTGTCCT +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSAGHCR*ACPCCP
Trigger: AGGACAGCAGGGACAAGCCCACCTACAGTGTCCTGC...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTAGAGTAGCTCCAGGGTaGGAGCTCCACGTTTCCACA +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCRVAPG*ELHVST
Trigger: TGTGGAAACGTGGAGCTCCCACCCTGGAGCTACTCT...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCTCGGATGGCAAATTTTaGCAGAGCAGTTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTASDGKF*QSSSNS
Trigger: GCTGTTGGAACTGCTCTGCCAAAATTTGCCATCCGA...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATATGCGGCAGTACAGCCTaGCCAGCGCAGCCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPICGSTA*PAQPRS
Trigger: GCTGCGAGGCTGCGCTGGCCAGGCTGTACTGCCGCA...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGCTGATGGTGCCGTCTaGGAGAGGAGGTGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDADGAV*ERRCEE
Trigger: CTCCTCGCACCTCCTCTCCCAGACGGCACCATCAGC...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTGACTGCTCCAGGAGGTaGAGACACCCCCAGTTTGAT +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCDCSRR*RHPQFD
Trigger: ATCAAACTGGGGGTGTCTCCACCTCCTGGAGCAGTC...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTGTAGAGAACCTGCCCTaGTCACCGGCCGCCGCCCCC +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTVENLP*SPAAAP
Trigger: GGGGGCGGCGGCCGGTGACCAGGGCAGGTTCTCTAC...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGGGGCCCACCAGGGCCTaGCAGGCATCGGCGATGGCG +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRGPTRA*QASAMA
Trigger: CGCCATCGCCGATGCCTGCCAGGCCCTGGTGGGCCC...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTTACACCTCATGGGGATaGAGCCGTGCGGGTGTGATG +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSYTSWG*SRAGVM
Trigger: CATCACACCCGCACGGCTCCATCCCCATGAGGTGTA...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTTGCTGTGGGTATACATaGGTGTCTGGCGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCCCGYT*VSGAAP
Trigger: TGGAGCTGCGCCAGACACCCATGTATACCCACAGCA...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAGAGCCGCTGGTGCCATaGACCTCCTCGCCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLEPLVP*TSSPVK
Trigger: CTTCACTGGCGAGGAGGTCCATGGCACCAGCGGCTC...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTAAGAACTCGATGTGCTaGTCCGTCTCCATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLKNSMC*SVSISP
Trigger: GGGGCTGATGGAGACGGACCAGCACATCGAGTTCTT...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTGATGTAGCGAGAGTCTaGGGAACCTGCTGTGCCATC +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSDVARV*GTCCAI
Trigger: GATGGCACAGCAGGTTCCCCAGACTCTCGCTACATC...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCGGACAAAGACCTATTTaGGGCAAAGATGCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTAGQRPI*GKDAVG
Trigger: ACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCC...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCTTTAGCCAGTGGGTGTaGGGGTTTCTGAATAAGAGA +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTAFSQWV*GFLNKR
Trigger: TCTCTTATTCAGAAACCCTCACACCCACTGGCTAAA...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTCCATCCCACCACATGTaGGTTCTTCAATTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGPSHHM*VLQFWV
Trigger: GACCCAGAATTGAAGAACTCACATGTGGTGGGATGG...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTGAGGACTTCATGGGATaGCTGGTCTTCCCGCTTGTG +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFEDFMG*LVFPLV
Trigger: CACAAGCGGGAAGACCAGTCATCCCATGAAGTCCTC...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCAAGAGGCAATGCCTCTaGTCTTGGAACACAAAGTCT +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTAKRQCL*SWNTKS
Trigger: AGACTTTGTGTTCCAAGATCAGAGGCATTGCCTCTT...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTCTAAAAGCTGGGCCATaGCCAGGCATGCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSLKAGP*PGMLLS
Trigger: GGACAAGAGCATGCCTGGTCATGGCCCAGCTTTTAG...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCTATCATATTGTTGCTaGGCGGTGGCCACGGCAGCA +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWLSYCC*AVATAA
Trigger: TGCTGCCGTGGCCACCGCTCAGCAACAATATGATAG...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCTCGGGGCGAAGATATTaGGCAGGGCCATGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTSGRRY*AGPCGS
Trigger: ACTGCCGCATGGCCCTGCTCAATATCTTCGCCCCGA...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCAGGAGGACGAGTCACTaGGATTTGGGGCGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTRRTSH*DLGRSL
Trigger: CAGCGACCGCCCCAAATCTCAGTGACTCGTCCTCCT...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTTGCGGATGGCGCCTCTaGCTACGCCCTCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLCGWRL*LRPRPG
Trigger: ACCTGGACGAGGGCGTAGTCAGAGGCGCCATCCGCA...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCGGAGCCGTGCGGGTGTaGTGGCGAGGTGGCGGCATA +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSGAVRV*WRGGGI
Trigger: TATGCCGCCACCTCGCCATCACACCCGCACGGCTCC...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTGGCCTGTGCTGCTCATaGACAAAGTACCACTGGACA +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLGLCCS*TKYHWT
Trigger: TGTCCAGTGGTACTTTGTTCATGAGCAGCACAGGCC...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTGGCAAGGCCCAAAGTaGCAGTGTCCAACAAGATGG +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLWQGPK*QCPTRW
Trigger: CCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCA...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCTGTCATCTACTCAAGTaGTGGCCAACAGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: RAAVVASQASRVGASVTACHLLK*WPTEAS
Trigger: AGAAGCTTCTGTTGGCCATCACTTGAGTAGATGACA...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAACAGGAGCAGTCAGGCTaGGATCTCGGCCAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQQEQSG*DLGQVA
Trigger: AGCCACCTGGCCGAGATCTCAGCCTGACTGCTCCTG...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCAGAGCGTCCTGACTGCTaGCGCCTGGAAGGCCAGGGG +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSERPDC*RLEGQG
Trigger: CCCCTGGCCTTCCAGGCGTCAGCAGTCAGGACGCTC...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCACAGCGGCGCCCCACTTaGTGCCTCGCCCGTGCAACT +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSQRRPT*CLARAT
Trigger: AGTTGCACGGGCGAGGCAGCAAGTGGGGCGCCGCTG...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377560.9
CDS-3UTR GCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACTTCACCGAGAGCCACTaGGCCGAGTCAGCGGCCGCC +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDFTESH*AESAAA
Trigger: GGCGGCCGCTGACTCGGCGCAGTGGCTCTCGGTGAA...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377560.9
CDS-3UTR GCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTGATGTGAAGGGCGCTTaGTCAGGTTGCTGCAACAAG +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSDVKGA*SGCCNK
Trigger: CTTGTTGCAGCAACCTGAGCAAGCGCCCTTCACATC...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGCTGCGATGGTGACATaGAGCAACAGCTCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDAAMVT*SNSSAR
Trigger: CCGAGCCGAGCTGTTGCTGCATGTCACCATCGCAGC...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGCCAAAAGGAAACTGCTaGTGGACACAGCTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALPKGNC*WTQLGQ
Trigger: CTGACCAAGCTGTGTCCAGCAGCAGTTTCCTTTTGG...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTGCTGCACAAGGCCACTaGGTACCAGGCACTTCTCTT +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSAAQGH*VPGTSL
Trigger: AAGAGAAGTGCCTGGTACGCAGTGGCCTTGTGCAGC...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTATGGTGAGAGGCGCTaGCCGCAGTATGTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLYGERR*PQYVKY
Trigger: GTACTTCACATACTGCGGGCAGCGCCTCTCACCATA...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGAGTCCTTCGGTAGCCTaGTGGGGGCCTTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWSPSVA*WGPFQH
Trigger: ATGTTGGAAAGGCCCCCAGCAGGCTACCGAAGGACT...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCCCCGCCGTGGGCGTTaGAGGCCTTGCGGATGGCGC +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAPRRGR*RPCGWR
Trigger: GCGCCATCCGCAAGGCCTGCAACGCCCACGGCGGGG...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CCAGAAGAACTCGATGTGCTGGTCCGTCTCCATCAGCCCCACTTGGTACATGGTAGATGCCCTGCGAGCTaGAGATGGAGGCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: PEELDVLVRLHQPHLVHGRCPAS*RWRPGW
Trigger: CCAGCCAGGCCTCCATCTGCAGCTCGCAGGGCATCT...ACCATGTACCAAGTGGGGCTGATGGAGACGGACCAGCACATCGAGTTCTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTGATGTACTGCACAAGTaGCACGTCCATCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLDVLHK*HVHLQG
Trigger: ACCCTGGAGATGGACGTGGCACTTGTGCAGTACATC...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAATGGGGATGGAGCCGTaGGGGTGTGATGGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQMGMEP*GCDGEV
Trigger: CACCTCGCCATCACACCCGCACGGCTCCATCCCCAT...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTAGCTCCTTACACACCTaGCACAGGAAGTGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCSSLHT*HRKWRK
Trigger: TTTCCGCCACTTCCTGTGGCAGGTGTGTAAGGAGCT...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAGGGCAGCGGGACGTCTaGCCGAATTGCAATCCCCAG +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQGQRDV*PNCNPQ
Trigger: CTGGGGATTGCAATTCGGGCAGACGTCCCGCTGCCC...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTAGGATATCCGCTTCCTaGAGGTCTTGCTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSRISAS*RSCSGS
Trigger: GGACCCTGAGCAAGACCTGCAGGAAGCGGATATCCT...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGCTCTCCGTGGCCAGGTaGTGGGAGGCGATCTCAGCG +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTLSVAR*WEAISA
Trigger: CGCTGAGATCGCCTCCCAGCACCTGGCCACGGAGAG...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTAGCCAGCAGAGTGGGTaGCTCAGTGACAGCCTAATT +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLSQQSG*LSDSLI
Trigger: AATTAGGCTGTCACTGAGGCACCCACTCTGCTGGCT...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTAGAGCCATCCAAGCATaGCAGCCTTTGAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGRAIQA*QPLNLL
Trigger: GAGCAAGTTCAAAGGCTGGCATGCTTGGATGGCTCT...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAGGGAGATCACGCCATTaGCCTCCACCTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQGRSRH*PPPATG
Trigger: GCCAGTGGCAGGTGGAGGCCAATGGCGTGATCTCCC...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GCCATCAACAACTGCCAAAGAAGCAATCCCGACCGTCGAATGATGTCTCGATTCGGTGTCCGCGGCCTCTaGGGCCCCGAGGATCTCGCT +
Preference number: 4 (lower is better)
Translates to: AINNCQRSNPDRRMMSRFGVRGL*GPEDLA
Trigger: AGCGAGATCCTCGGGGCCCCAGAGGCCGCGGACACC...GAATCGAGACATCATTCGACGGTCGGGATTGCTTCTTTGGCAGTTGTTGATGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550724.2
CDS-3UTR CCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTAGTCAGCAGGCTCCTTaGTCAAGCTCAAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFSQQAP*SSSKAG
Trigger: GCCAGCCTTTGAGCTTGACCAAGGAGCCTGCTGACT...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTCAGTGTGTTGGAGATaGTGGAACCAGTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLSVCWR*WNQSGQ
Trigger: CTGCCCTGACTGGTTCCACCATCTCCAACACACTGA...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAACTCGTGAGGCCCGACTaGGCTGCGATGGTGACATGC +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQLVRPD*AAMVTC
Trigger: GCATGTCACCATCGCAGCCCAGTCGGGCCTCACGAG...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTAGGCGGGTGAGGGTCTaGGCCAGAGGTGATGAAATT +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFRRVRV*ARGDEI
Trigger: AATTTCATCACCTCTGGCCCAGACCCTCACCCGCCT...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGAGGCGGGTGAGGGTCTaGGCCAGAGGTGATGAAATT +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWRRVRV*ARGDEI
Trigger: AATTTCATCACCTCTGGCCCAGACCCTCACCCGCCT...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCGGGCCCACCAGGGCCTaGCAGGCATCGGCGATGGCG +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSGPTRA*QASAMA
Trigger: CGCCATCGCCGATGCCTGCCAGGCCCTGGTGGGCCC...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTACCAGCAAGCGGCTGTaGGCGGTGGGGCCCACCAGG +
Preference number: 4 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACTSKRL*AVGPTR
Trigger: CCTGGTGGGCCCCACCGCCCACAGCCGCTTGCTGGT...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCATGGCTGGACACCGCGTaGGGCTCCAACAGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSWLDTA*GSNRPG
Trigger: TCCGGGCCTGTTGGAGCCCCACGCGGTGTCCAGCCA...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCAGGTGCTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATGTCAAACTTGGGCTTTaGCACGCCATACTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PGAGRRSQRTGPPARSHHVKLGL*HAILPQ
Trigger: CTGAGGAAGTATGGCGTGCCAAAGCCCAAGTTTGAC...ATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAGCACCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGTGCTGTGGGTATACATaGGTGTCTGGCGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWCCGYT*VSGAAP
Trigger: TGGAGCTGCGCCAGACACCCATGTATACCCACAGCA...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTCCCACAATTTCCAGTaGGTCCAAGGTGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALSHNFQ*VQGDLR
Trigger: CCTGAGATCACCTTGGACCCACTGGAAATTGTGGGA...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTGGAGGCCCTGGAATGTaGACGAAAGTTTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGGGPGM*TKVWKS
Trigger: GCTTTTCCAAACTTTCGTCCACATTCCAGGGCCTCC...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCAGGTGCTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATGGAGGCCCTGGAATGTaGACGAAAGTTTGGAAAAGC +
Preference number: 4 (lower is better)
Translates to: PGAGRRSQRTGPPARSHHGGPGM*TKVWKS
Trigger: GCTTTTCCAAACTTTCGTCCACATTCCAGGGCCTCC...ATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAGCACCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACCAGCCACCTCTATGTaGAGGGAGGCCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIPATSM*REACWG
Trigger: GCCCCAGCAGGCCTCCCTCCACATAGAGGTGGCTGG...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAGGGGCAGGTGAACGGGATGCGCTCCTGGTTGCAGGCAAACTTGATGAACTTGGCAGATAGGGAGGTATaGGAGGGGCAGGGGAACCAC +
Preference number: 4 (lower is better)
Translates to: QGQVNGMRSWLQANLMNLADREV*EGQGNH
Trigger: GTGGTTCCCCTGCCCCTCCCATACCTCCCTATCTGC...CAAGTTCATCAAGTTTGCCTGCAACCAGGAGCGCATCCCGTTCACCTGCCCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTGCTCGGCCAGGTCGGTaGCCCGGATCAGCCCGTCGT +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAARPGR*PGSARR
Trigger: ACGACGGGCTGATCCGGGTCACCGACCTGGCCGAGC...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTTTGGAGCCATCAACAACTGCCAAAGAAGCAATCCCGACCGTCGAATGATGTCGCTCGGCCAGGTCGGTaGCCCGGATCAGCCCGTCGT +
Preference number: 4 (lower is better)
Translates to: FWSHQQLPKKQSRPSNDVARPGR*PGSARR
Trigger: ACGACGGGCTGATCCGGGTCACCGACCTGGCCGAGC...GACATCATTCGACGGTCGGGATTGCTTCTTTGGCAGTTGTTGATGGCTCCAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550724.2
CDS-3UTR TCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGGTGGCAGAGCTGCCTaGTCCCCCTGGAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLGGRAA*SPWRRH
Trigger: GTGCCTCCTCCAGGGGGATCAGGCAGCTCTGCCACC...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTGGTGGCAGAGCTGCCTaGTCCCCCTGGAGGAGGCAC +
Preference number: 4 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACGGRAA*SPWRRH
Trigger: GTGCCTCCTCCAGGGGGATCAGGCAGCTCTGCCACC...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTACGTGGCGACGCCTCTaGTTTGCTCTAGTAAATTCC +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCTWRRL*FALVNS
Trigger: GGAATTTACTAGAGCAAATCAGAGGCGTCGCCACGT...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTATGCCATCACAGGAGCTaGCCCATCTCCTGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLCHHRS*PISCCR
Trigger: CCTGCAACAGGAGATGGGTCAGCTCCTGTGATGGCA...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGCCCGCAGGCGCCGCCTaGGACCCAGTTCTGCGTCTC +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKPAGAA*DPVLRL
Trigger: GAGACGCAGAACTGGGTCTCAGGCGGCGCCTGCGGG...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCCCCGCAGGCGCCGCCTaGGACCCAGTTCTGCGTCTC +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSPAGAA*DPVLRL
Trigger: GAGACGCAGAACTGGGTCTCAGGCGGCGCCTGCGGG...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTATGTAGATCTCGTCTTTaGAGACCCCGCCGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLCRSRL*RPRRGR
Trigger: ACGCCCACGGCGGGGTCTTCAAAGACGAGATCTACA...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGTGGAGGCGGAGGCGCTaGTGCTCATGGCGGGGGTCA +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLWRRRR*CSWRGS
Trigger: TGACCCCCGCCATGAGCATCAGCGCCTCCGCCTCCA...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCCGACTGCGAAGCCTTTaGTGGGGCGGGCGGCGAGGG +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSRLRSL*WGGRRG
Trigger: CCCTCGCCGCCCGCCCCATCAAAGGCTTCGCAGTCG...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTAAATGTCAGAGACTCTaGTGGGCTTCGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSKCQRL*WASLVS
Trigger: TGACACCAGCGAAGCCCATCAGAGTCTCTGACATTT...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTATCTCCAGTGTGGTGTTaGGGGACTGCAGCAAGGCGA +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLSPVWC*GTAARR
Trigger: TCGCCTTGCTGCAGTCCCTCAACACCACACTGGAGA...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCCGCCACTGGCCAGCTTaGCGCAGAGCTGAGACGACG +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSRHWPA*RRAETT
Trigger: CGTCGTCTCAGCTCTGCGTCAAGCTGGCCAGTGGCG...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCGAGTGGGTGCCTCAGTaGCAGCCTAATTCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTEWVPQ*QPNSGA
Trigger: AGCCCCAGAATTAGGCTGTCACTGAGGCACCCACTC...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTAGAATCTGGTGGCCATaGGGGACAATGTCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCRIWWP*GTMSKK
Trigger: CTTCTTGGACATTGTCCCTCATGGCCACCAGATTCT...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAGGGGAGGCAGCGGGCTaGCCATCTTCTTTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLGEAAG*PSSFKA
Trigger: TGCTTTGAAAGAAGATGGTCAGCCCGCTGCCTCCCC...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GCAGTGTCGGGACCCCCATCTTTGCAGGGGCAGGTGAACGGGATGCGCTCCTGGTGTCATCTACTCAAGTaGTGGCCAACAGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: AVSGPPSLQGQVNGMRSWCHLLK*WPTEAS
Trigger: AGAAGCTTCTGTTGGCCATCACTTGAGTAGATGACA...CCAGGAGCGCATCCCGTTCACCTGCCCCTGCAAAGATGGGGGTCCCGACACTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGAAGCATGCCAGCCTTTaGACTTGCTCAGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALKHASL*TCSARV
Trigger: TACTCTTGCTGAGCAAGTTCAAAGGCTGGCATGCTT...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTGGAGCCATCAACAACTaGCAAAGAAGCAATCCCGAC +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSGAINN*QRSNPD
Trigger: GTCGGGATTGCTTCTTTGGCAGTTGTTGATGGCTCC...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCTTGCTGCCTCGCCCGTaGAACTCCGCCCTAGGCGGT +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSLLPRP*NSALGG
Trigger: ACCGCCTAGGGCGGAGTTGCACGGGCGAGGCAGCAA...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377560.9
CDS-3UTR GCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACACGGCGCCCCACTTGCTaGCTCGCCCGTGCAACTCCG +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTRRPTC*LARATP
Trigger: CGGAGTTGCACGGGCGAGGCAGCAAGTGGGGCGCCG...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377560.9
CDS-3UTR GCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGATCGGGTGGCAGAGCTaGCTGATCCCCCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTIGWQS*LIPLEE
Trigger: CTCCTCCAGGGGGATCAGGCAGCTCTGCCACCCGAT...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTGCACCAGTGCCTGCTTaGGAGTGTTTCCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFAPVPA*ECFPAA
Trigger: GGCGGCGGGGAAACACTCGCAAGCAGGCACTGGTGC...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGGAGTCCAATGCTATTTaGGCAAGCGATAGGGTAACG +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALESNAI*ASDRVT
Trigger: CGTTACCCTATCGCTTGCGCAAATAGCATTGGACTC...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTCACAGGATCAGTCCTTaGAAGCTCCGAGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSHRISP*KLRVPL
Trigger: GAGAGGAACTCGGAGCTTGCAAGGACTGATCCTGTG...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGATGCTGTTTGCCACATaGCCACTGATGAAGGGACGC +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWMLFAT*PLMKGR
Trigger: GCGTCCCTTCATCAGTGGGCATGTGGCAAACAGCAT...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTATGCTGTTTGCCACATaGCCACTGATGAAGGGACGC +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFMLFAT*PLMKGR
Trigger: GCGTCCCTTCATCAGTGGGCATGTGGCAAACAGCAT...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTCTCCCAGCCAATTCCTaGCACGTCACCGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLLPANS*HVTGGE
Trigger: CTCTCCCCCGGTGACGTGGCAGGAATTGGCTGGGAG...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGTATGGTGAGAGGCGCTaGCCGCAGTATGTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWYGERR*PQYVKY
Trigger: GTACTTCACATACTGCGGGCAGCGCCTCTCACCATA...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTGAACCACTGGCCACATaGCACCAGAGACGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSEPLAT*HQRRLQ
Trigger: TTGAAGACGTCTCTGGTGGCATGTGGCCAGTGGTTC...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATTGATGCTTCACTGTCTGGGAGTTaGCCTGGTAAAAGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: LGGDLSAQGLQLGLIIDASLSGS*PGKRGP
Trigger: CGGACCTCTTTTACCAGGGCAACTCCCAGACAGTGA...AGCATCAATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGCTCTCCTCGCCCTGGTaGAGGGTCCGGGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLLSSPW*RVRVMA
Trigger: GGCCATCACCCGGACCCTGCACCAGGGCGAGGAGAG...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTATTCCAGGACAGCAGCTaGTCTGCGAAGGCCATAGCC +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLFQDSS*SAKAIA
Trigger: GGCTATGGCCTTCGCAGAGCAGCTGCTGTCCTGGAA...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAGGGAAGACTGGCGCTTaGCCGACGAGGAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQGKTGA*PTRRPF
Trigger: AAAAGGCCTCCTCGTCGGGCAAGCGCCAGTCTTCCC...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAACCTCCATGCTGTCTGTaGCGGGGAAGGCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQPPCCL*RGRPVS
Trigger: AGACACTGGCCTTCCCCGGCACAGACAGCATGGAGG...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTCACCGAGGCCGTCTCTaGATTGTCCAGGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFHRGRL*IVQGLP
Trigger: GGGGAGCCCCTGGACAATGCAGAGACGGCCTCGGTG...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTGGAAAGAGCCGCTGGTaGCATGGACCTCCTCGCCAG +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLGKSRW*HGPPRQ
Trigger: CTGGCGAGGAGGTCCATGGCACCAGCGGCTCTTTCC...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAGCTTCCTGCAGGTCTTaGTCAGGGTCCAAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQASCRS*SGSKGS
Trigger: CGAGCCCTTGGACCCTGAGCAAGACCTGCAGGAAGC...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGTGTGCCGGCCCCGGCTaGACAGCTCCACCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKCAGPG*TAPPPR
Trigger: GCGAGGAGGTGGAGCTGTGCAGCCGGGGCCGGCACA...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTCACGCCACAAGGATGTaGCGGCCCCGGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACHATRM*RPRLHS
Trigger: GCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTG...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCAGAGGCCTGCTGGGGCTaGCTCTGGAGCAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSEACWG*LWSNSS
Trigger: GCTGGAGTTGCTCCAGAGGCAGCCCCAGCAGGCCTC...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTCTTTATCATGATTCCTaGAGGCAGTCTGATCCGAGG +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGLYHDS*RQSDPR
Trigger: CCTCGGATCAGACTGCCTCCAGGAATCATGATAAAG...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGCCCCGAGGATCTCGCTaGGCAGCTCGGCCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTPRGSR*AARPGR
Trigger: CCGACCTGGCCGAGCTGCCCAGCGAGATCCTCGGGG...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CCAAAGAAGCAATCCCGACCGTCGAATGATGTCTCGATTCCTTTCAGTTTGTGGCCCCGAGGATCTCGCTaGGCAGCTCGGCCAGGTCGG +
Preference number: 4 (lower is better)
Translates to: PKKQSRPSNDVSIPFSLWPRGSR*AARPGR
Trigger: CCGACCTGGCCGAGCTGCCCAGCGAGATCCTCGGGG...CCACAAACTGAAAGGAATCGAGACATCATTCGACGGTCGGGATTGCTTCTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550724.2
CDS-3UTR CCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTGGTGTCCGCGGCCTCTaGGGCCCCGAGGATCTCGCT +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCGVRGL*GPEDLA
Trigger: AGCGAGATCCTCGGGGCCCCAGAGGCCGCGGACACC...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACTCGTGAGGCCCGACTaGGCTGCGATGGTGACATGC +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPILVRPD*AAMVTC
Trigger: GCATGTCACCATCGCAGCCCAGTCGGGCCTCACGAG...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCTCGCCAAAGGCTTCCTaGACCTGCTCGACCATCCCA +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTSPKAS*TCSTIP
Trigger: TGGGATGGTCGAGCAGGTCCAGGAAGCCTTTGGCGA...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTGGTCTGTTTCTCACTaGAGCTGGACTCGGTCTGAT +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLWSVSH*SWTRSD
Trigger: ATCAGACCGAGTCCAGCTCCAGTGAGAAACAGACCA...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTAGACTAAGGACATCCTaGAGCGCGTCATTCCCAGCA +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSRLRTS*SASFPA
Trigger: TGCTGGGAATGACGCGCTCCAGGATGTCCTTAGTCT...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTGATAGACTCTACAGGTaGCCCAATGCTGACGATGAG +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCDRLYR*PNADDE
Trigger: CTCATCGTCAGCATTGGGCCACCTGTAGAGTCTATC...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTCCACTCACAGTCTCTaGGTTGATAGACTCTACAGG +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALSTHSL*VDRLYR
Trigger: CCTGTAGAGTCTATCAACCCAGAGACTGTGAGTGGA...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCACTGCAAAGGAGGTGGTaGGGGCCGAGCACAGTCCCG +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSLQRRW*GPSTVP
Trigger: CGGGACTGTGCTCGGCCCCCACCACCTCCTTTGCAG...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATCTGCAAAGGAGGTGGTaGGGGCCGAGCACAGTCCCG +
Preference number: 4 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYLQRRW*GPSTVP
Trigger: CGGGACTGTGCTCGGCCCCCACCACCTCCTTTGCAG...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTAGCCAAAGGAAACTATaGGTCCGGTGTCATCATCGG +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLSQRKL*VRCHHR
Trigger: CCGATGATGACACCGGACCCATAGTTTCCTTTGGCT...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CTTGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCCACCTCTCCACTGTAACAAACTaGAGCCATTATAGTGCACGG +
Preference number: 4 (lower is better)
Translates to: LVLPRHKDVPAPAAQLHLSTVTN*SHYSAR
Trigger: CCGTGCACTATAATGGCTCCAGTTTGTTACAGTGGA...GAGGTGGAGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACAGTACACCCGGCCCTTaGCTGGCTGTCCCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDSTPGP*LAVPEE
Trigger: CTCCTCCGGGACAGCCAGCCAAGGGCCGGGTGTACT...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTAGTACACCCGGCCCTTaGCTGGCTGTCCCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTSTPGP*LAVPEE
Trigger: CTCCTCCGGGACAGCCAGCCAAGGGCCGGGTGTACT...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTGGTAAAAGAGGTCCGTaGCGGAGCAGTTCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSGKRGP*RSSSGN
Trigger: ATTCCCAGAACTGCTCCGCCACGGACCTCTTTTACC...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACAGGCTCTCCTCGCCCTaGTGCAGGGTCCGGGTGATG +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDRLSSP*CRVRVM
Trigger: CATCACCCGGACCCTGCACCAGGGCGAGGAGAGCCT...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCAAGCCCAGTGTTGGCTaGGGACGCGTCCCGCGGGTA +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSKPSVG*GRVPRV
Trigger: TACCCGCGGGACGCGTCCCCAGCCAACACTGGGCTT...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGGTGCAAGCCCAGTGTTaGCTGGGGACGCGTCCCGCG +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRVQAQC*LGTRPA
Trigger: CGCGGGACGCGTCCCCAGCCAACACTGGGCTTGCAC...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTAGGCTGCCATGTCCGTaGTCCACAAGAAGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSRLPCP*STRSFL
Trigger: TAGGAAACTTCTTGTGGACCACGGACATGGCAGCCT...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCACGCCCTCGTCCAGGTaGGTGGGGATCCCGGAGATC +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSTPSSR*VGIPEI
Trigger: GATCTCCGGGATCCCCACCCACCTGGACGAGGGCGT...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCGGAGACAGGCCACTCTaGGGTCAGCAGCATCCGCGG +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSGDRPL*GQQHPR
Trigger: CCGCGGATGCTGCTGACCCCAGAGTGGCCTGTCTCC...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACAGAAGATCAGCCCTTTaGCCTCCTTCAGCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDRRSAL*PPSAGR
Trigger: CCGCCCTGCTGAAGGAGGCCAAAGGGCTGATCTTCT...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTTCCGTGGCCAGGTGCTaGGAGGCGATCTCAGCGCAC +
Preference number: 4 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFSVARC*EAISAH
Trigger: GTGCGCTGAGATCGCCTCCCAGCACCTGGCCACGGA...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTAGGGACGGGCCGCAGTaGTGGCTTCCCAAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFRDGPQ*WLPKPA
Trigger: TGCTGGCTTGGGAAGCCACCACTGCGGCCCGTCCCT...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTACCACAGGCTTGTCTGTaGAGGCGCTCTGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLPQACL*RRSAES
Trigger: GCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGG...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCGCTGGAGGGCAGGGCTaGCCACAGGCTTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSAGGQG*PQACLW
Trigger: CCACAGACAAGCCTGTGGCCAGCCCTGCCCTCCAGC...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTTGCTGGGGCTGCCTCTaGAGCAACTCCAGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLCWGCL*SNSSSR
Trigger: CCTCGAGCTGGAGTTGCTCCAGAGGCAGCCCCAGCA...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGAGATCTCGGCCAGGTaGCTGAGATGCCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDEISAR*LRCLTH
Trigger: GTGAGTCAGGCATCTCAGCCACCTGGCCGAGATCTC...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCTTCGCTGTGGTGCCATaGACCTCCTCGCCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTFAVVP*TSSPVK
Trigger: CTTCACTGGCGAGGAGGTCCATGGCACCACAGCGAA...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTTGGTGGCAAGAAGATTaGGTTGGTGTATGCACATCG +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSWWQED*VGVCTS
Trigger: CGATGTGCATACACCAACTCAATCTTCTTGCCACCA...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATAGCAACCAACTGTCAGTaGGACGCCATGTTGGGGGCG +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIATNCQ*DAMLGA
Trigger: CGCCCCCAACATGGCGTCTCACTGACAGTTGGTTGC...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377560.9
CDS-3UTR TCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTGACGAAAGTTTTCAATaGTCCCCTGGCACAAGCCAA +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLDESFQ*SPGTSQ
Trigger: TTGGCTTGTGCCAGGGGATCATTGAAAACTTTCGTC...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGCAGCAAGCGTTGCTaGCGGGGAGGCTCTATACCG +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDGSKRC*RGGSIP
Trigger: CGGTATAGAGCCTCCCCGTCAGCAACGCTTGCTGCC...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCGCTGACGATGAGGCCTaGCTGTGCCCACTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSADDEA*LCPLGG
Trigger: GCCACCAAGTGGGCACAGTCAGGCCTCATCGTCAGC...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACCTATCATATTGTTGCTaGGCGGTGGCCACGGCAGCA +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDLSYCC*AVATAA
Trigger: TGCTGCCGTGGCCACCGCTCAGCAACAATATGATAG...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCGGATCGAGCTGGAGCTaGTGGTGCCGTCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSGSSWS*WCRLGE
Trigger: CTCTCCCAGACGGCACCATCAGCTCCAGCTCGATCC...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTACCCTTCACTGTCCTCTaGTTTCCAGGACAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLPFTVL*FPGQQL
Trigger: CAGCTGCTGTCCTGGAAATCAGAGGACAGTGAAGGG...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACATTTGGGGCGGTCGCTaGGGTCACCCCACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDIWGGR*GHPTGC
Trigger: ACAGCCAGTGGGGTGACCTCAGCGACCGCCCCAAAT...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGGCTCAGCGTCTGCTCTaGATGGGCACAACTCTTAAA +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWAQRLL*MGTTLK
Trigger: TTTAAGAGTTGTGCCCATTCAGAGCAGACGCTGAGC...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGCGGCCGGACATTGGTaGAGAAGAGGTGGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTAAGHW*RRGGGG
Trigger: ACCTCCTCCACCTCTTCTTCACCAATGTCCGGCCGC...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACCAGGGTCCACTTTCTTaGGGCCTTCTGTGCATGTCG +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDQGPLS*GLLCMS
Trigger: CGACATGCACAGAAGGCCTCAAGAAAGTGGACCCTG...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTAGAATCTGGTGGCCATaGGGGACAATGTCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFRIWWP*GTMSKK
Trigger: CTTCTTGGACATTGTCCCTCATGGCCACCAGATTCT...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCGTGGAGGCGCTCTGCTaGAAGCACGAGCGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSVEALC*KHERSV
Trigger: CACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCAC...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCGAGGAGGCCCCCACCTaGGCATTGTCCCCCATCTCT +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSEEAPT*ALSPIS
Trigger: AGAGATGGGGGACAATGCTCAGGTGGGGGCCTCCTC...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTCTGATGCAGCTGTCATaGTTAACCCTAGGTCGATTT +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGLMQLS*LTLGRF
Trigger: AAATCGACCTAGGGTTAATCATGACAGCTGCATCAG...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTGCTTCAATTGGATGCTaGTTGCCCAAGACACTTGTG +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSASIGC*LPKTLV
Trigger: CACAAGTGTCTTGGGCAAGCAGCATCCAATTGAAGC...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTACATCAGGGAACAGCCTaGACTTCTGGTCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLHQGTA*TSGLVH
Trigger: GTGCACCAGACCAGAAGTGCAGGCTGTTCCCTGATG...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAACGGATCAGCCCGTCGTaGAGGAAGATGGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQRISPS*RKMVSS
Trigger: GGAAGAGACCATCTTCCTGCACGACGGGCTGATCCG...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTCGGGCCAGACCTGAGTaGACAGCCTCTGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTRARPE*TASVEP
Trigger: TGGCTCCACAGAGGCTGTGCACTCAGGTCTGGCCCG...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATAGAAGGCTGGACACCTaGCGGGCCAGACCTGAGTGC +
Preference number: 4 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYRRLDT*RARPEC
Trigger: GCACTCAGGTCTGGCCCGGCAGGTGTCCAGCCTTCT...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTTCCAAGTGCACACAGTaGGGCAACGGCCTGGCGTGC +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTSKCTQ*GNGLAC
Trigger: GCACGCCAGGCCGTTGCCGCACTGTGTGCACTTGGA...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCAACAGGTCAGCAGCATTaGGGTGGGCCTGCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSTGQQH*GGPALP
Trigger: CGGAAGGGCAGGCCCACCGCAATGCTGCTGACCTGT...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTTGCTGGCTACATTATTaGTGTCTGGAGAGCGGGTTA +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCCWLHY*CLESGL
Trigger: TAACCCGCTCTCCAGACAGCAATAATGTAGCCAGCA...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACAGTCCTTCGGTAGCCTaGTGGGGGCCTTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDSPSVA*WGPFQH
Trigger: ATGTTGGAAAGGCCCCCAGCAGGCTACCGAAGGACT...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGTGGGAATGGATGCAATaGTGTAAAGACTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWWEWMQ*CKDCAR
Trigger: CCTGGCGCAGTCTTTACAGCATTGCATCCATTCCCA...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AGCGGGACGTCTGCCCGAATTGCAATCCCCAGCAGCTGCCCCAGGAAGTGCAGCAGTTCTGGGAATGGATaGAATGCTGTAAAGACTGCG +
Preference number: 4 (lower is better)
Translates to: SGTSARIAIPSSCPRKCSSSGNG*NAVKTA
Trigger: CGCAGTCTTTACAGCATTGCATCCATTCCCAGAACT...GCTGCACTTCCTGGGGCAGCTGCTGGGGATTGCAATTCGGGCAGACGTCCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACACTCTCCTCGCCCTGGTaGAGGGTCCGGGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTLSSPW*RVRVMA
Trigger: GGCCATCACCCGGACCCTGCACCAGGGCGAGGAGAG...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTAGCAGCTCCACCACCTaGAGGAGGACGGATGTCGGA +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLSSSTT*RRTDVG
Trigger: TCCGACATCCGTCCTCCTGCAGGTGGTGGAGCTGCT...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTAGATGCCCTGCGAGCTaGAGATGGAGGCCTGGCTGG +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTRCPAS*RWRPGW
Trigger: CCAGCCAGGCCTCCATCTGCAGCTCGCAGGGCATCT...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATCCAGGCTGCCGGTGCTaGACAGGGAAATGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYPGCRC*TGKCPG
Trigger: GCCTGGACATTTCCCTGTGCAGCACCGGCAGCCTGG...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATCCAGGCTGCCCAGGCTaGCCAGGCTGCCGGTGCTGC +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNPGCPG*PGCRCC
Trigger: GCAGCACCGGCAGCCTGGGCAGCCTGGGCAGCCTGG...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTCGGCCTTGCTGTACTTaGTCTTGTCAAACTTGGGCT +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFRPCCT*SCQTWA
Trigger: AGCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCG...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGGGGCACAGCAGCAGCAGCGACAGCGAGGAACTCTGCAGCTCCTTACACACCTCGGCCTTGCTGTACTTaGTCTTGTCAAACTTGGGCT +
Preference number: 4 (lower is better)
Translates to: WGTAAAATARNSAAPYTPRPCCT*SCQTWA
Trigger: AGCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCG...AGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCTGCTGCTGCTGTGCCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATACCACCTTCACGGGGTaGTGCTCCTTCCCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYTTFTG*CSFPAL
Trigger: CAAGGCCGGGAAGGAGCAGCACCCCGTGAAGGTGGT...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACTGGTCCGCTGTCCTCTaGACAGTGGCATTCAGCACT +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDWSAVL*TVAFST
Trigger: AGTGCTGAATGCCACTGTGCAGAGGACAGCGGACCA...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTGGGCAGCGGGACGTCTaGCCGAATTGCAATCCCCAG +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTGQRDV*PNCNPQ
Trigger: CTGGGGATTGCAATTCGGGCAGACGTCCCGCTGCCC...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GTGAATGGCACAACGAAGTTTCTCCAGCATGATTTCCAGAGAGGAGTACTGGGGCTCTCCGTGGCCAGGTaGTGGGAGGCGATCTCAGCG +
Preference number: 4 (lower is better)
Translates to: VNGTTKFLQHDFQRGVLGLSVAR*WEAISA
Trigger: CGCTGAGATCGCCTCCCAGCACCTGGCCACGGAGAG...CCCCAGTACTCCTCTCTGGAAATCATGCTGGAGAAACTTCGTTGTGCCATTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACACACGCCACAAGGATGTaGCGGCCCCGGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTHATRM*RPRLHS
Trigger: GCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTG...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGCACGCCACAAGGATGTaGCGGCCCCGGCTGCACAGC +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTHATRM*RPRLHS
Trigger: GCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTG...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGACGCACTCCACATTCTaGAGCTCCCGCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLTHSTF*SSRSRR
Trigger: CCTGCGGCTGCGGGAGCTGCAGAATGTGGAGTGCGT...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTCCCCTGCGGCTGGGATaGACCCAGCTAGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACPLRLG*TQLGSV
Trigger: CACAGAGCCTAGCTGGGTGCATCCCAGCCGCAGGGG...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGGCTGTTCAGCCAGGTTaGTTAGGATCACATCCCGTA +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWAVQPG*LGSHPV
Trigger: TACGGGATGTGATCCTAACCAACCTGGCTGAACAGC...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTCCAAATCGGTTGTTTTaGAGCTGTTCAGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCPNRLF*SCSARL
Trigger: CAACCTGGCTGAACAGCTCCAAAACAACCGATTTGG...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACCGGTTGGCAAGCACCTaGAAGGCAGCCCAGGCCATG +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDRLAST*KAAQAM
Trigger: CATGGCCTGGGCTGCCTTCCAGGTGCTTGCCAACCG...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACCTGGCTGGCTCAGGATaGCTTTACCTATGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDLAGSG*LYLCGS
Trigger: GGAGCCACATAGGTAAAGCCATCCTGAGCCAGCCAG...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAGCCGCCCGGCACAGCTaGAGAATAATAAGGACTAGC +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLAARHS*RIIRTS
Trigger: GCTAGTCCTTATTATTCTCCAGCTGTGCCGGGCGGC...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCACTGTGCCCACTTGGTaGCTTTCCGCAGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSTVPTW*LSAGRL
Trigger: CAGCCGCCCTGCGGAAAGCCACCAAGTGGGCACAGT...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAAGGCGGGTGAGGGTCTaGGCCAGAGGTGATGAAATT +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLRRVRV*ARGDEI
Trigger: AATTTCATCACCTCTGGCCCAGACCCTCACCCGCCT...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAGGGGCAGGTGAACGGGATGCGCTCCTGGTTGCAGGCAAACTTGATGAACTTGGGACGGATGTCGGAATaGTGTCAGGCTCATCTTCGG +
Preference number: 4 (lower is better)
Translates to: QGQVNGMRSWLQANLMNLGRMSE*CQAHLR
Trigger: CCGAAGATGAGCCTGACACCATTCCGACATCCGTCC...CAAGTTCATCAAGTTTGCCTGCAACCAGGAGCGCATCCCGTTCACCTGCCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGACGCCCTCGTCCAGGTaGGTGGGGATCCCGGAGATC +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLTPSSR*VGIPEI
Trigger: GATCTCCGGGATCCCCACCCACCTGGACGAGGGCGT...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTTTGAAGACCCCGCCGTaGGCGTTGCAGGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACLKTPP*ALQALR
Trigger: CCGCAAGGCCTGCAACGCCCACGGCGGGGTCTTCAA...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAGTGGAGGAGGTTGCCTaGGGTCTGGGAGTTGATCTG +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQVEEVA*GLGVDL
Trigger: CAGATCAACTCCCAGACCCCAGGCAACCTCCTCCAC...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTGTCAAACTTGGGCTTTaGCACGCCATACTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFVKLGL*HAILPQ
Trigger: CTGAGGAAGTATGGCGTGCCAAAGCCCAAGTTTGAC...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGATCTCAGGGGCCGCGTaGTCCGCTGTCCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLISGAA*SAVLCT
Trigger: TGTGCAGAGGACAGCGGACCACGCGGCCCCTGAGAT...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCATCTCAGGGGCCGCGTaGTCCGCTGTCCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGISGAA*SAVLCT
Trigger: TGTGCAGAGGACAGCGGACCACGCGGCCCCTGAGAT...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTGAGCCGCTGGTGCCATaGACCTCCTCGCCAGTGAAG +
Preference number: 4 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFEPLVP*TSSPVK
Trigger: CTTCACTGGCGAGGAGGTCCATGGCACCAGCGGCTC...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATTGCACAGCTCCTCCTaGGTGAACATCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQLHSSS*VNISRA
Trigger: GGCCCTGGAGATGTTCACCCAGGAGGAGCTGTGCAA...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGGGGTACGGGGGCACATaGGCAGTGTCGGGACCCCCA +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKGYGGT*AVSGPP
Trigger: TGGGGGTCCCGACACTGCCCATGTGCCCCCGTACCC...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTGGGGCAAAGATGCAGTaGGTGAGCCTGGAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLGAKMQ*VSLEAA
Trigger: AGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCC...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTGTTACAGGGAGGAGATaGATGCTAACGGCTCTATCT +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLVTGRR*MLTALS
Trigger: AGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAAC...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCGGCGCAGGCTCTCGATaGGCACGTCTGAGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFGAGSR*ARLRAQ
Trigger: CTGCGCCCTCAGACGTGCCCATCGAGAGCCTGCGCC...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGGGCGCAGGCTCTCGATaGGCACGTCTGAGGGCGCAG +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTGAGSR*ARLRAQ
Trigger: CTGCGCCCTCAGACGTGCCCATCGAGAGCCTGCGCC...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp GTGAATGGCACAACGAAGTTTCTCCAGCATGATTTCCAGAGAGGAGTACTGGGGCCAGGGCTGGCACTCTaGGCAGGTTCGCTGTGGTGC +
Preference number: 4 (lower is better)
Translates to: VNGTTKFLQHDFQRGVLGPGLAL*AGSLWC
Trigger: GCACCACAGCGAACCTGCCCAGAGTGCCAGCCCTGG...CCCCAGTACTCCTCTCTGGAAATCATGCTGGAGAAACTTCGTTGTGCCATTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR CAA 72 bp GAACTCGATGTGCTGGTCCGTCTCCATCAGCCCCACTaGGTACATGGTGTGGGCCTTGAGGAACTCGAGGTT +
Preference number: 4 (lower is better)
Translates to: ELDVLVRLHQPH*VHGVGLEELEV
Trigger: AACCTCGAGTTCCTCAAGGCCCACACCATGTACCAAGTGGGGCTGATGGAGACGGACCAGCACATCGAGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
3UTR CAA 72 bp TCTTTGCAGGGGCAGGTGAACGGGATGCGCTCCTGGTaGCAGGCAAACTTGATGAACTTGCACAGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: SLQGQVNGMRSW*QANLMNLHSSS
Trigger: GGAGGAGCTGTGCAAGTTCATCAAGTTTGCCTGCAACCAGGAGCGCATCCCGTTCACCTGCCCCTGCAAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGCAGTTTGGCACTTGGTaGTTAAGATACAGGATTCTC +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALQFGTW*LRYRIL
Trigger: GAGAATCCTGTATCTTAATCACCAAGTGCCAAACTG...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGTCAGGGCATCCGCCATaGTCAGAGTCTGTAAATTTG +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWSGHPP*SESVNL
Trigger: CAAATTTACAGACTCTGATCATGGCGGATGCCCTGA...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTATTTATAGTTGTCTCTaGCGGGGTGGACTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCIYSCL*RGGLFP
Trigger: TGGAAACAGTCCACCCCGTCAGAGACAACTATAAAT...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATCAGAGGGGTAGGTaGATTCTCTGTCTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWHQRGR*ILCLPL
Trigger: TAGAGGAAGACAGAGAATTCACCTACCCCTCTGATG...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAAAAGACCATCTGCCGTaGGACAGCGTCCCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQKDHLP*DSVPSQ
Trigger: CTGACTTGGGACGCTGTCTCACGGCAGATGGTCTTT...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTACCTGGAAAAGGGAGTaGGGTTTATTATCGAAAGAG +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGTWKRE*GLLSKE
Trigger: CTCTTTCGATAATAAACCTCACTCCCTTTTCCAGGT...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGCTGCCAATGGGGAGGTaGTTGGCTGGCATTGGCACC +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLLPMGR*LAGIGT
Trigger: GGTGCCAATGCCAGCCAATCACCTCCCCATTGGCAG...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATCTGCCAATGGGGAGGTaGTTGGCTGGCATTGGCACC +
Preference number: 4 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYLPMGR*LAGIGT
Trigger: GGTGCCAATGCCAGCCAATCACCTCCCCATTGGCAG...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAATTCTGGGTCCTCCCTaGAGGACCATCGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQILGPP*RTIVTG
Trigger: TCCAGTGACGATGGTCCTTCAGGGAGGACCCAGAAT...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTCCTCTACCTAAAACCTaGACCTCGGATCCTATCTTG +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFPLPKT*TSDPIL
Trigger: CAAGATAGGATCCGAGGTTCAGGTTTTAGGTAGAGG...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCGGAGGTGCGAGGAGCTaGTTGGACAGCAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGGGARS*LDSSCR
Trigger: CCTGCAACTGCTGTCCAATCAGCTCCTCGCACCTCC...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGAGGTGCGAGGAGCTaGTTGGACAGCAGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDGGARS*LDSSCR
Trigger: CCTGCAACTGCTGTCCAATCAGCTCCTCGCACCTCC...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTCCTTCCATGAGTGCATaGAAATACGTAGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSPSMSA*KYVENL
Trigger: CAGGTTCTCTACGTATTTTCATGCACTCATGGAAGG...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGACCACAGAGAGGTCGCTaGCGGTTTGGGAGATGCCCT +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGPQRGR*RFGRCP
Trigger: AGGGCATCTCCCAAACCGTCAGCGACCTCTCTGTGG...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCAGCGGCCGGACATTGGTaGAGAAGAGGTGGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSAAGHW*RRGGGG
Trigger: ACCTCCTCCACCTCTTCTTCACCAATGTCCGGCCGC...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGGGAGCCGTGCGGGTGTaGTGGCGAGGTGGCGGCATA +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTGAVRV*WRGGGI
Trigger: TATGCCGCCACCTCGCCATCACACCCGCACGGCTCC...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCCAGTGGGTCCAAGGTaGTCTCAGGGGCCGCGTGGT +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCPVGPR*SQGPRG
Trigger: ACCACGCGGCCCCTGAGATCACCTTGGACCCACTGG...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCCCAGTGGGTCCAAGGTaGTCTCAGGGGCCGCGTGGT +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSPVGPR*SQGPRG
Trigger: ACCACGCGGCCCCTGAGATCACCTTGGACCCACTGG...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCGCCACTGGCCAGCTTaGCGCAGAGCTGAGACGACG +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCRHWPA*RRAETT
Trigger: CGTCGTCTCAGCTCTGCGTCAAGCTGGCCAGTGGCG...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACACGCCACTGGCCAGCTTaGCGCAGAGCTGAGACGACG +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTRHWPA*RRAETT
Trigger: CGTCGTCTCAGCTCTGCGTCAAGCTGGCCAGTGGCG...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACGAGGAGGCCTCAGATaGAAACTGTCAGACCAGGGC +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIRGGLR*KLSDQG
Trigger: GCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCG...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTCTGATGCAGCTGTCATaGTTAACCCTAGGTCGATTT +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCLMQLS*LTLGRF
Trigger: AAATCGACCTAGGGTTAATCATGACAGCTGCATCAG...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTCTGATGCAGCTGTCATaGTTAACCCTAGGTCGATTT +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSLMQLS*LTLGRF
Trigger: AAATCGACCTAGGGTTAATCATGACAGCTGCATCAG...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTGGGGAGGCAGCGGGCTaGCCATCTTCTTTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLGEAAG*PSSFKA
Trigger: TGCTTTGAAAGAAGATGGTCAGCCCGCTGCCTCCCC...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTTGTCATCTACTCAAGTaGTGGCCAACAGAAGCTTCT +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSCHLLK*WPTEAS
Trigger: AGAAGCTTCTGTTGGCCATCACTTGAGTAGATGACA...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCCTCGATGGGCACGTCTaGGGGCGCAGGAGCAGTCAG +
Preference number: 4 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFLDGHV*GRRSSQ
Trigger: CTGACTGCTCCTGCGCCCTCAGACGTGCCCATCGAG...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR GCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTGATCATCCTCATCACTaGCAAATCGGTTGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGDHPHH*QIGCFG
Trigger: TCCAAAACAACCGATTTGGCAGTGATGAGGATGATC...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTAAGCCTTTTAACCTCTaGTCACGGTCTGCTATGTCA +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLKPFNL*SRSAMS
Trigger: TGACATAGCAGACCGTGAGCAGAGGTTAAAAGGCTT...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCGCACTTCTGGTCTGGTaGACCACACGGGGAACAGCC +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSALLVW*TTRGTA
Trigger: GGCTGTTCCCCGTGTGGTGCACCAGACCAGAAGTGC...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGGAGGCCCGACTGGGCTaGGATGGTGACATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLEARLG*DGDMQQ
Trigger: TTGCTGCATGTCACCATCGCAGCCCAGTCGGGCCTC...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGAGGCCCGACTGGGCTaGGATGGTGACATGCAGCAA +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDEARLG*DGDMQQ
Trigger: TTGCTGCATGTCACCATCGCAGCCCAGTCGGGCCTC...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCAGGTGGGCTTGTCCCTaGTGTCCTCAATGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGRWACP*CPQWPA
Trigger: CGCTGGCCATTGAGGACAGCAGGGACAAGCCCACCT...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGGCACCAGTGCCTGCTTaGGAGTGTTTCCCCGCCGCC +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKAPVPA*ECFPAA
Trigger: GGCGGCGGGGAAACACTCGCAAGCAGGCACTGGTGC...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAAGCAATTCCCGCATGTaGACCAGTGCCTGCTTGCGA +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQSNSRM*TSACLR
Trigger: TCGCAAGCAGGCACTGGTGCACATGCGGGAATTGCT...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTGAGTCCAATGCTATTTaGGCAAGCGATAGGGTAACG +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFESNAI*ASDRVT
Trigger: CGTTACCCTATCGCTTGCGCAAATAGCATTGGACTC...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTTGGACTCGGTCTGATTaGTCAAGCTACACAGTCGAT +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFWTRSD*SSYTVD
Trigger: ATCGACTGTGTAGCTTGAGCAATCAGACCGAGTCCA...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTGGAATGTACATCAGTaGTCTAGACAGAACCTTCTC +
Preference number: 4 (lower is better)
Translates to: GWPQACLWRRSAESTSALWNVHQ*SRQNLL
Trigger: GAGAAGGTTCTGTCTAGAGCACTGATGTACATTCCA...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTCTGATGCAATACTGGTaGCAGCATCATTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCLMQYW*QHHCHC
Trigger: ACAGTGACAATGATGCTGGCACCAGTATTGCATCAG...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCATGGTGGCCCATGAGTaGCTGGGTCTGATGCAATAC +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTMVAHE*LGLMQY
Trigger: GTATTGCATCAGACCCAGGCACTCATGGGCCACCAT...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CCAGAAGAACTCGATGTGCTGGTCCGTCTCCATCAGCCCCACTTGGTACATGGTTCCGCTCTGCTTCATTaGGGAAGCGTCTTCGGATGG +
Preference number: 4 (lower is better)
Translates to: PEELDVLVRLHQPHLVHGSALLH*GSVFGW
Trigger: CCATCCGAAGACGCTTCCGCAATGAAGCAGAGCGGA...ACCATGTACCAAGTGGGGCTGATGGAGACGGACCAGCACATCGAGTTCTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTGTCTGGGAGAGGAGGTaGGAGGAGCTGATTGGACAG +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLVWERR*EELIGQ
Trigger: CTGTCCAATCAGCTCCTCGCACCTCCTCTCCCAGAC...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAATATACGAGCACCCGTaGCCACGGTGCCTTGTACAG +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQIYEHP*PRCLVQ
Trigger: CTGTACAAGGCACCGTGGGCACGGGTGCTCGTATAT...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCCCAGGGTGTGCACCGTaGGCAGGAGCTCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSPGCAP*AGALPG
Trigger: TCCTGGCAGAGCTCCTGCGCACGGTGCACACCCTGG...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCGGGGTGCCGCCTCTaGTCCAGGGTGTGCACCGTG +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDAGCRL*SRVCTV
Trigger: CACGGTGCACACCCTGGAGCAGAGGCGGCACCCCGC...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCGGTCCGAGTCCACGGTaGGGGAAGACTGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSGPSPR*GKTGAC
Trigger: GCAAGCGCCAGTCTTCCCGCACCGTGGACTCGGACC...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGCACCGAGGCCGTCTCTaGATTGTCCAGGGGCTCCCC +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTHRGRL*IVQGLP
Trigger: GGGGAGCCCCTGGACAATGCAGAGACGGCCTCGGTG...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACTCTTATCTCCACGACTaGGAAGCCTTTGATGGGGCG +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDSYLHD*EAFDGA
Trigger: CGCCCCATCAAAGGCTTCGCAGTCGTGGAGATAAGA...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATGTGGTGTTGAGGGACTaGAGCAAGGCGAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYVVLRD*SKAKRR
Trigger: CCTGCGCTTCGCCTTGCTGCAGTCCCTCAACACCAC...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGCATGGTCAGCAGCTaGAGGGGGATGATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGSMVSS*RGMMEP
Trigger: GGGCTCCATCATCCCCCTGCAGCTGCTGACCATGCT...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGTGTCTTCTCACCCCCTaGGGCTGGGATGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRCLLTP*GWDAPS
Trigger: GCTGGGTGCATCCCAGCCGCAGGGGGTGAGAAGACA...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATAGCCAGGTGGCTGAGATaGCTGACTCACAGGCAACAC +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIARWLR*LTHRQH
Trigger: GTGTTGCCTGTGAGTCAGGCATCTCAGCCACCTGGC...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATACACGCTCCCAATCCTaGTACGAGAGCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYTRSQS*YESTTP
Trigger: GGGCGTGGTGCTCTCGTACCAGGATTGGGAGCGTGT...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCACCCTGCTGTCCTCAATaGCCAGCGACTGCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSPCCPQ*PATAGV
Trigger: CACTCCTGCAGTCGCTGGCCATTGAGGACAGCAGGG...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGCCCTGCTGTCCTCAATaGCCAGCGACTGCAGGAGTG +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLPCCPQ*PATAGV
Trigger: CACTCCTGCAGTCGCTGGCCATTGAGGACAGCAGGG...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACCAGCCCAGGCCATGGTaGCCACCTTCTGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDQPRPW*PPSASW
Trigger: CCAAGAAGCAGAAGGTGGCCACCATGGCCTGGGCTG...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGTGGAAGCTGGGTCGCTaGGATCCTCCTGCTCACTGT +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTWKLGR*DPPAHC
Trigger: ACAGTGAGCAGGAGGATCCCAGCGACCCAGCTTCCA...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCGCAGGGAGGCGATCTTaGAAGCTGGGTCGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGAGRRS*KLGRWD
Trigger: ATCCCAGCGACCCAGCTTCCAAGATCGCCTCCCTGC...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTAACTGTCTGACATCCTaGAACCACATAATCTGCCAG +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSNCLTS*NHIICQ
Trigger: CTGGCAGATTATGTGGTTCCAGGATGTCAGACAGTT...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTAGCCTGCAAAGGAGGTaGTGGGGGCCGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACSLQRR*WGPSTV
Trigger: GACTGTGCTCGGCCCCCACCACCTCCTTTGCAGGCT...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGAGCCTGCAAAGGAGGTaGTGGGGGCCGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLSLQRR*WGPSTV
Trigger: GACTGTGCTCGGCCCCCACCACCTCCTTTGCAGGCT...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAGCAGCGACAGCGAGGAACTCTGCAGCTCCTTACACACCTGCCACAGGAAGTGAGCCAAAGGAAACTATaGGTCCGGTGTCATCATCGG +
Preference number: 4 (lower is better)
Translates to: QQRQRGTLQLLTHLPQEVSQRKL*VRCHHR
Trigger: CCGATGATGACACCGGACCCATAGTTTCCTTTGGCT...CACTTCCTGTGGCAGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGACTGTCCCGGAGGAGGTaGAGTCCCCTCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGLSRRR*SPLSSL
Trigger: GAGAGAACTGAGGGGACTCCACCTCCTCCGGGACAG...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATCACCCGGCCCTTGGCTaGCTGTCCCGGAGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDHPALG*LSRRRW
Trigger: CCACCTCCTCCGGGACAGCCAGCCAAGGGCCGGGTG...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTATTGTTGCTGAGCGGTaGCCACGGCAGCAATCCGGC +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTIVAER*PRQQSG
Trigger: GCCGGATTGCTGCCGTGGCCACCGCTCAGCAACAAT...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGGCTGATGGTGCCGTCTaGGAGAGGAGGTGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRADGAV*ERRCEE
Trigger: CTCCTCGCACCTCCTCTCCCAGACGGCACCATCAGC...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCAGGCTCTCCTCGCCCTaGTGCAGGGTCCGGGTGATG +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSRLSSP*CRVRVM
Trigger: CATCACCCGGACCCTGCACCAGGGCGAGGAGAGCCT...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGACGGTGCGGGAAGACTaGCGCTTGCCCGACGAGGAG +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKTVRED*RLPDEE
Trigger: CTCCTCGTCGGGCAAGCGCCAGTCTTCCCGCACCGT...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCAGGGTGAGTGCGCGGTaGAACCACAGCATGTCCTCG +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGRVSAR*NHSMSS
Trigger: CGAGGACATGCTGTGGTTCCACCGCGCACTCACCCT...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGCCTCGTCCAGGTGGGTaGGGATCCCGGAGATCACCA +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLPRPGG*GSRRSP
Trigger: TGGTGATCTCCGGGATCCCCACCCACCTGGACGAGG...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTACGCCCTCGTCCAGGTaGGTGGGGATCCCGGAGATC +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCTPSSR*VGIPEI
Trigger: GATCTCCGGGATCCCCACCCACCTGGACGAGGGCGT...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATATCTGATGGGCTTCGCTaGTGTCAGGCTCAGCGTCTG +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPISDGLR*CQAQRL
Trigger: CAGACGCTGAGCCTGACACCAGCGAAGCCCATCAGA...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTGTATACATGGGTGTCTaGCGCAGCTCCACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTVYMGV*RSSTRG
Trigger: GCCCCTGGTGGAGCTGCGCCAGACACCCATGTATAC...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGATCTCAGGGGCCGCGTaGTCCGCTGTCCTCTGCACA +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRISGAA*SAVLCT
Trigger: TGTGCAGAGGACAGCGGACCACGCGGCCCCTGAGAT...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCGGCGGAAAGAGCCGCTaGTGCCATGGACCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSGGKSR*CHGPPR
Trigger: GCGAGGAGGTCCATGGCACCAGCGGCTCTTTCCGCC...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATTGATGCTTCCAGAGAGGAGTACTaGGGAAGCTTGATCATGAAC +
Preference number: 4 (lower is better)
Translates to: LGGDLSAQGLQLGLIIDASREEY*GSLIMN
Trigger: GTTCATGATCAAGCTTCCCCAGTACTCCTCTCTGGA...AGCATCAATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGACACGAGCGCTCTGTGTaGCCGAGGTCATTGTACCCC +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGHERSV*PRSLYP
Trigger: GGGGTACAATGACCTCGGCCACACAGAGCGCTCGTG...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTCACGAGCGCTCTGTGTaGCCGAGGTCATTGTACCCC +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTHERSV*PRSLYP
Trigger: GGGGTACAATGACCTCGGCCACACAGAGCGCTCGTG...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGCCAGCCACCTCTATGTaGAGGGAGGCCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKPATSM*REACWG
Trigger: GCCCCAGCAGGCCTCCCTCCACATAGAGGTGGCTGG...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAACGTGTTTGGGCAATTaGCCCAGCCACCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLTCLGN*PSHLYV
Trigger: CACATAGAGGTGGCTGGGCCAATTGCCCAAACACGT...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
3UTR CAA 72 bp CGGGCTGACCATCTTCTTTCAAAGCAGGGGAACTGCTaGCGGGCACTCACCTCCAGAGTTGACTTGCATCCA +
Preference number: 4 (lower is better)
Translates to: RADHLLSKQGNC*RALTSRVDLHP
Trigger: TGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTGAAAGAAGATGGTCAGCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTATTTATAGTTGTCTCTaGCGGGGTGGACTGTTTCCA +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSIYSCL*RGGLFP
Trigger: TGGAAACAGTCCACCCCGTCAGAGACAACTATAAAT...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATAACAAGCCCTGGCGTTTaGGCAGGGCCAAAGTTTCCT +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPITSPGV*AGPKFP
Trigger: AGGAAACTTTGGCCCTGCTCAAACGCCAGGGCTTGT...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTAAAGACCATCTGCCGTaGGACAGCGTCCCAAGTCAG +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLKDHLP*DSVPSQ
Trigger: CTGACTTGGGACGCTGTCTCACGGCAGATGGTCTTT...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACCACCTGGCACACCTaGAGGGTGTTCTGGTCAATG +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLTTWHT*RVFWSM
Trigger: CATTGACCAGAACACCCTTCAGGTGTGCCAGGTGGT...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCAGAGATGCTTCTCGTaGGGCCCGACTGGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAQRCFS*GPTGLR
Trigger: TCGCAGCCCAGTCGGGCCTCACGAGAAGCATCTCTG...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGCAGGGTTGGTGCCGATaGAAGCAAACAGCTGCCCTA +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTQGWCR*KQTAAL
Trigger: TAGGGCAGCTGTTTGCTTTCATCGGCACCAACCCTG...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCGCTGACGATGAGGCCTaGCTGTGCCCACTTGGTGGC +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSADDEA*LCPLGG
Trigger: GCCACCAAGTGGGCACAGTCAGGCCTCATCGTCAGC...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTAATAGTCAATGTGTCTaGCGCTTGCGAAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLNSQCV*RLRSLS
Trigger: AGAAAGACTTCGCAAGCGTCAGACACATTGACTATT...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGGCTGCCCGCAGTATGTaGAGTACACCCGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTAARSM*STPGPW
Trigger: CCAAGGGCCGGGTGTACTTCACATACTGCGGGCAGC...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATAATGAGTGCCTGGGTCTaGTGCAATACTGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIMSAWV*CNTGAS
Trigger: GCTGGCACCAGTATTGCATCAGACCCAGGCACTCAT...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGCGGCATGGTGGCCCATaGGTGCCTGGGTCTGATGCA +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKRHGGP*VPGSDA
Trigger: TGCATCAGACCCAGGCACTCATGGGCCACCATGCCG...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CAGCAGCGACAGCGAGGAACTCTGCAGCTCCTTACACACCTGCCACAGGAAGTGTCTAAGACGACTCCATaGAGCCCAAAGGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: QQRQRGTLQLLTHLPQEVSKTTP*SPKVFS
Trigger: GCTGAAAACCTTTGGGCTTCATGGAGTCGTCTTAGA...CACTTCCTGTGGCAGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCTGCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTAATTCACGTCCATGTTaGCTTTGGATTCGGAAATTG +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGNSRPC*LWIRKL
Trigger: CAATTTCCGAATCCAAAGTCAACATGGACGTGAATT...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAACAGGCGGCCTCGATaGGGTTCAGCTGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGNRRPR*GSAGHF
Trigger: GAAATGGCCAGCTGAACCTCATCGAGGCCGCCTGTT...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCTCCTCAGGATCTGGGTaGGCTGATCCTCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSSSGSG*ADPPAP
Trigger: AGGTGCTGGAGGATCAGCTCACCCAGATCCTGAGGA...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CCAGGTGCTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATTCAATAACAAATTTGTaGAATCCTTCCAGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: PGAGRRSQRTGPPARSHHSITNL*NPSSVR
Trigger: CCTGACGCTGGAAGGATTTCACAAATTTGTTATTGA...ATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAGCACCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCGGCATAGCTGGTTaGTGTACTGCACAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTGGIAG*CTAQVP
Trigger: TGGCACTTGTGCAGTACATCAACCAGCTATGCCGCC...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCTCTCCAGTGTGGTGTTaGGGGACTGCAGCAAGGCGA +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSSPVWC*GTAARR
Trigger: TCGCCTTGCTGCAGTCCCTCAACACCACACTGGAGA...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCGAGTGGGTGCCTCAGTaGCAGCCTAATTCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSEWVPQ*QPNSGA
Trigger: AGCCCCAGAATTAGGCTGTCACTGAGGCACCCACTC...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGAACTAAGGTCGGGATaGACCCTTAAGTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDELRSG*TLKSPA
Trigger: AGCAGGAGACTTAAGGGTTCATCCCGACCTTAGTTC...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCGAGGAGGCCCCCACCTaGGCATTGTCCCCCATCTCT +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSEEAPT*ALSPIS
Trigger: AGAGATGGGGGACAATGCTCAGGTGGGGGCCTCCTC...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAAAGCAGACCCCAAATTaGGCAGAGCACCTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQKQTPN*AEHLSP
Trigger: TGGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTT...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTATAAATACAGCGATGTaGTTCTGTGAGACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSINTAM*FCETWQ
Trigger: TTGCCAGGTCTCACAGAATCACATCGCTGTATTTAT...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCACCTGAGCGCGAACTGTaGAAGCAAAGCCCCACATGG +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSPEREL*KQSPTW
Trigger: CCATGTGGGGCTTTGCTTGCACAGTTCGCGCTCAGG...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAGCCGGGCATAGGCATTaGTCTGATTCCCACAAACAG +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQAGHRH*SDSHKQ
Trigger: CTGTTTGTGGGAATCAGAGCAATGCCTATGCCCGGC...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGGGCGCTTGCTCAGGTTaGTGCAACAAGCCCTGGCGT +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRGACSG*CNKPWR
Trigger: ACGCCAGGGCTTGTTGCAGCAACCTGAGCAAGCGCC...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAATCGGGTGGCAGAGCTaGCTGATCCCCCTGGAGGAG +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTIGWQS*LIPLEE
Trigger: CTCCTCCAGGGGGATCAGGCAGCTCTGCCACCCGAT...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATCAATGGCCAGCGACTaGAGGAGTGTAAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQSMASD*RSVKEL
Trigger: CAGCTCCTTTACACTCCTGCAGTCGCTGGCCATTGA...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAATGTGCACCAGTGCCTaGTTGCGAGTGTTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGMCTSA*LRVFPR
Trigger: GCGGGGAAACACTCGCAAGCAGGCACTGGTGCACAT...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCACTGGACCCACAAGATaGGTCACTCCCCCGACTCGT +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSTGPTR*VTPPTR
Trigger: ACGAGTCGGGGGAGTGACGCATCTTGTGGGTCCAGT...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTAATGTGTCTGACGCTTaGGAAGTCTTTCTACAGTCT +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLNVSDA*EVFLQS
Trigger: AGACTGTAGAAAGACTTCGCAAGCGTCAGACACATT...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACACTCCCAGCCAATTCCTaGCACGTCACCGGGGGAGAG +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTLPANS*HVTGGE
Trigger: CTCTCCCCCGGTGACGTGGCAGGAATTGGCTGGGAG...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTCTGATGCAATACTGGTaGCAGCATCATTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFLMQYW*QHHCHC
Trigger: ACAGTGACAATGATGCTGGCACCAGTATTGCATCAG...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATGTCTGGGAGAGGAGGTaGGAGGAGCTGATTGGACAG +
Preference number: 4 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYVWERR*EELIGQ
Trigger: CTGTCCAATCAGCTCCTCGCACCTCCTCTCCCAGAC...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTACAGAGAGGAGTCTTTaGGGAATCCAGATTGACTTT +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSTERSL*GIQIDF
Trigger: AAAGTCAATCTGGATTCCGCAAAGACTCCTCTCTGT...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCGATGAGCAGGGTGAGTaGGCGGTGGAACCACAGCAT +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSDEQGE*AVEPQH
Trigger: ATGCTGTGGTTCCACCGCGCACTCACCCTGCTCATC...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGCCCCGCCGTGGGCGTTaGAGGCCTTGCGGATGGCGC +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMPRRGR*RPCGWR
Trigger: GCGCCATCCGCAAGGCCTGCAACGCCCACGGCGGGG...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGCCTCCATGCTGTCTGTaGCGGGGAAGGCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRPPCCL*RGRPVS
Trigger: AGACACTGGCCTTCCCCGGCACAGACAGCATGGAGG...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACCGGCCTTGCTGTACTTaGTCTTGTCAAACTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDRPCCT*SCQTWA
Trigger: AGCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCG...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTACCTTCACGGGGTGCTaGTCCTTCCCGGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTATFTGC*SFPALL
Trigger: CAGCAAGGCCGGGAAGGAGCAGCACCCCGTGAAGGT...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAACCACCTTCACGGGGTaGTGCTCCTTCCCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTTTFTG*CSFPAL
Trigger: CAAGGCCGGGAAGGAGCAGCACCCCGTGAAGGTGGT...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGACCACCTTCACGGGGTaGTGCTCCTTCCCGGCCTTG +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTTTFTG*CSFPAL
Trigger: CAAGGCCGGGAAGGAGCAGCACCCCGTGAAGGTGGT...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCCATGTCGGACATCGATaGATGCGCACCTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTHVGHR*MRTSQS
Trigger: ACTTTGAGAGGTGCGCATGCATCGATGTCCGACATG...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCATGGGGATGGAGCCGTaGGGGTGTGATGGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFMGMEP*GCDGEV
Trigger: CACCTCGCCATCACACCCGCACGGCTCCATCCCCAT...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR GCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTTCAGCAGGGCGGCGATaGTGTGGGTATACATGGGTG +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTSAGRR*CGYTWV
Trigger: CACCCATGTATACCCACAGCATCGCCGCCCTGCTGA...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CCAGAAGAACTCGATGTGCTGGTCCGTCTCCATCAGCCCCACTTGGTACATGGTAGCTCCTTACACACCTaGCACAGGAAGTGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: PEELDVLVRLHQPHLVHGSSLHT*HRKWRK
Trigger: TTTCCGCCACTTCCTGTGGCAGGTGTGTAAGGAGCT...ACCATGTACCAAGTGGGGCTGATGGAGACGGACCAGCACATCGAGTTCTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTGCTTCCTGCAGGTCTTaGTCAGGGTCCAAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACASCRS*SGSKGS
Trigger: CGAGCCCTTGGACCCTGAGCAAGACCTGCAGGAAGC...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCTGTGCCGGCCCCGGCTaGACAGCTCCACCTCCTCGC +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSCAGPG*TAPPPR
Trigger: GCGAGGAGGTGGAGCTGTGCAGCCGGGGCCGGCACA...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCACAGGCTCCGGATGGCTaGCGCGTAGATGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSQAPDG*RVDVLV
Trigger: AACAAGGACATCTACGCGGCAGCCATCCGGAGCCTG...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAACGCACTCCACATTCTaGAGCTCCCGCAGCCGCAGG +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTTHSTF*SSRSRR
Trigger: CCTGCGGCTGCGGGAGCTGCAGAATGTGGAGTGCGT...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGTGTCTTCTCACCCCCTaGGGCTGGGATGCACCCAGC +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKCLLTP*GWDAPS
Trigger: GCTGGGTGCATCCCAGCCGCAGGGGGTGAGAAGACA...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCCTTGGGTGGGCCTGTTaGTCCAGAGGAGCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFLGWAC*SRGALP
Trigger: AGGCAGGGCTCCTCTGGAGCAACAGGCCCACCCAAG...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CCA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTCCTGCACTTCTGGTCTaGTGCACCACACGGGGAACA +
Preference number: 4 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFPALLV*CTTRGT
Trigger: TGTTCCCCGTGTGGTGCACCAGACCAGAAGTGCAGG...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAGCGATCACCAGTCCATaGCAGCGGCCGCCGCGCCCG +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTAITSP*QRPPRP
Trigger: CGGGCGCGGCGGCCGCTGCCATGGACTGGTGATCGC...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377560.9
CDS-3UTR CCA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTATTCCGACGGGTTCTTaGTCTCAAAGGTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGIPTGS*SQRLKS
Trigger: AGATTTTAACCTTTGAGACCAAGAACCCGTCGGAAT...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTAAGGCCAGCTGGCGCTaGGCATTCCACAGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCKASWR*AFHSPR
Trigger: GCGAGGACTGTGGAATGCCCAGCGCCAGCTGGCCTT...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTTGCTGCAACAAGCCCTaGCGTTTGAGCAGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLCCNKP*RLSRAK
Trigger: TTTGGCCCTGCTCAAACGCCAGGGCTTGTTGCAGCA...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCAAAGAGACAGGCCGGTaGAGAAGACTGCCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSKETGR*RRLPLP
Trigger: TGGCAGCGGCAGTCTTCTCCACCGGCCTGTCTCTTT...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGTTTTCTCATTCAGGCTaGCAGGAGACCAGATCCAAT +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWFSHSG*QETRSN
Trigger: ATTGGATCTGGTCTCCTGCCAGCCTGAATGAGAAAA...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAAAAAGAGATCGGGTaGCAGAGCTGCCTGATCCCC +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIQKEIG*QSCLIP
Trigger: GGGGATCAGGCAGCTCTGCCACCCGATCTCTTTTTG...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTCTGCTGGACACAGCTTaGTCAGGGTTGGTGCCGATG +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTLLDTA*SGLVPM
Trigger: CATCGGCACCAACCCTGACCAAGCTGTGTCCAGCAG...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTCTGCTGGACACAGCTTaGTCAGGGTTGGTGCCGATG +
Preference number: 4 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFLLDTA*SGLVPM
Trigger: CATCGGCACCAACCCTGACCAAGCTGTGTCCAGCAG...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCGGTTGGCAAGCACCTaGAAGGCAGCCCAGGCCATG +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTARLAST*KAAQAM
Trigger: CATGGCCTGGGCTGCCTTCCAGGTGCTTGCCAACCG...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATAGTGGCTCGGGCAAGATaGTTAGTGAGAAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIVARAR*LVRRLD
Trigger: GTCCAGCCTTCTCACTAACCATCTTGCCCGAGCCAC...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGGCAGGGAGAGGAGTTTaGACACACAAGCTGGCTGGC +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLAGRGV*THKLAG
Trigger: GCCAGCCAGCTTGTGTGTCCAAACTCCTCTCCCTGC...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTTTGGAGACGGGCGTTaGTCAAGCAGCAGGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLFGDGR*SSSRER
Trigger: CCTCTCCCTGCTGCTTGACCAACGCCCGTCTCCAAA...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCATGGAAGCTGGGTCGCTaGGATCCTCCTGCTCACTGT +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSWKLGR*DPPAHC
Trigger: ACAGTGAGCAGGAGGATCCCAGCGACCCAGCTTCCA...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGGCGATCTTGGAAGCTaGGTCGCTGGGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLGDLGS*VAGILL
Trigger: CAGGAGGATCCCAGCGACCCAGCTTCCAAGATCGCC...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTGACTGTGCCCACTTaGTGGCTTTCCGCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCLTVPT*WLSAGR
Trigger: CCGCCCTGCGGAAAGCCACCAAGTGGGCACAGTCAG...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTGACTGTGCCCACTTaGTGGCTTTCCGCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTALTVPT*WLSAGR
Trigger: CCGCCCTGCGGAAAGCCACCAAGTGGGCACAGTCAG...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGTCTTTTTGTCGCCTGTaGATAGTCCACTCACAGTCT +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWSFCRL*IVHSQS
Trigger: AGACTGTGAGTGGACTATCCACAGGCGACAAAAAGA...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTAGCCTGCAAAGGAGGTaGTGGGGGCCGAGCACAGTC +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCSLQRR*WGPSTV
Trigger: GACTGTGCTCGGCCCCCACCACCTCCTTTGCAGGCT...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCGCTCGGCCGTTGTTATaGAAAAGACAAGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTARPLL*KRQVPT
Trigger: AGTGGGCACTTGTCTTTTCCATAACAACGGCCGAGC...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATTTCATCATCTGCAATaGGAGGCGGGTGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQFHHLQ*EAGEGL
Trigger: CAGACCCTCACCCGCCTCCCATTGCAGATGATGAAA...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATGCGGCAGTACAGCCTaGCCAGCGCAGCCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPICGSTA*PAQPRS
Trigger: GCTGCGAGGCTGCGCTGGCCAGGCTGTACTGCCGCA...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATTGCGGCAGTACAGCCTaGCCAGCGCAGCCTCGCAGC +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDCGSTA*PAQPRS
Trigger: GCTGCGAGGCTGCGCTGGCCAGGCTGTACTGCCGCA...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATAGTGCGAGGAGCTGATTaGACAGCAGTTGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIVRGAD*TAVAGA
Trigger: AGCACCTGCAACTGCTGTCCAATCAGCTCCTCGCAC...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCAGAAGAACTCGATGTGCTGGTCCGTCTCCATCAGCCCCACTTGGTACATGGTGGTAAAAGAGGTCCGTaGCGGAGCAGTTCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: PEELDVLVRLHQPHLVHGGKRGP*RSSSGN
Trigger: ATTCCCAGAACTGCTCCGCCACGGACCTCTTTTACC...ACCATGTACCAAGTGGGGCTGATGGAGACGGACCAGCACATCGAGTTCTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGACCCCCAGTTTGATGTaGACCCTGTCTGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTTPSLM*TLSVER
Trigger: CCTCTCCACAGACAGGGTCCACATCAAACTGGGGGT...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTGGACGGATGTCGGAATaGTGTCAGGCTCATCTTCGG +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLGRMSE*CQAHLR
Trigger: CCGAAGATGAGCCTGACACCATTCCGACATCCGTCC...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGACGGTGCGGGAAGACTaGCGCTTGCCCGACGAGGAG +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTTVRED*RLPDEE
Trigger: CTCCTCGTCGGGCAAGCGCCAGTCTTCCCGCACCGT...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACTCCTTCCTGGTGAGGTaGCGGAGGATGATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDSFLVR*RRMMSR
Trigger: CCTGCTCATCATCCTCCGCCACCTCACCAGGAAGGA...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCCTCGTCCAGGTGGGTaGGGATCCCGGAGATCACCA +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAPRPGG*GSRRSP
Trigger: TGGTGATCTCCGGGATCCCCACCCACCTGGACGAGG...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATTGGCTGGACACCGCGTaGGGCTCCAACAGGCCCGGA +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDWLDTA*GSNRPG
Trigger: TCCGGGCCTGTTGGAGCCCCACGCGGTGTCCAGCCA...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGGTGGAGGAGGTTGCCTaGGGTCTGGGAGTTGATCTG +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLVEEVA*GLGVDL
Trigger: CAGATCAACTCCCAGACCCCAGGCAACCTCCTCCAC...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGGGAGACAGGCCACTCTaGGGTCAGCAGCATCCGCGG +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTGDRPL*GQQHPR
Trigger: CCGCGGATGCTGCTGACCCCAGAGTGGCCTGTCTCC...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCTGCAGCAGGGCTTGTTaGGGCTGTCAGGGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSCSRAC*GCQGSP
Trigger: CGGAGAGCCCTGACAGCCCCAACAAGCCCTGCTGCA...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTCAGCTCCATCTCCAGTaGGCTGAGCATGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFQLHLQ*AEHGQQ
Trigger: CTGCTGACCATGCTCAGCCCACTGGAGATGGAGCTG...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCAGAAGAACTCGATGTGCTGGTCCGTCTCCATCAGCCCCACTTGGTACATGGTACTTGGTACATGGTGTaGGCCTTGAGGAACTCGAGG +
Preference number: 4 (lower is better)
Translates to: PEELDVLVRLHQPHLVHGTWYMV*ALRNSR
Trigger: CCTCGAGTTCCTCAAGGCCCACACCATGTACCAAGT...ACCATGTACCAAGTGGGGCTGATGGAGACGGACCAGCACATCGAGTTCTTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTTCCATCAGCCCCACTTaGTACATGGTGTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLSISPT*YMVWAL
Trigger: CAAGGCCCACACCATGTACCAAGTGGGGCTGATGGA...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGAAGAACTCGATGTGCTaGTCCGTCTCCATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTKNSMC*SVSISP
Trigger: GGGGCTGATGGAGACGGACCAGCACATCGAGTTCTT...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCTTGCACAGCTCCTCCTaGGTGAACATCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSLHSSS*VNISRA
Trigger: GGCCCTGGAGATGTTCACCCAGGAGGAGCTGTGCAA...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAAACGGGATGCGCTCCTaGTTGCAGGCAAACTTGATG +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQNGMRS*LQANLM
Trigger: CATCAAGTTTGCCTGCAACCAGGAGCGCATCCCGTT...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATAGATGTAGCGAGAGTCTaGGGAACCTGCTGTGCCATC +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIDVARV*GTCCAI
Trigger: GATGGCACAGCAGGTTCCCCAGACTCTCGCTACATC...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGCCACAGGCTTGTCTGTaGAGGCGCTCTGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLPQACL*RRSAES
Trigger: GCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGG...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATAGAGGCAGCTCAGCCCTaGCATACACACTTACATGGG +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIEAAQP*HTHLHG
Trigger: CCCATGTAAGTGTGTATGCCAGGGCTGAGCTGCCTC...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGGGGGCAAAGATGCAGTaGGTGAGCCTGGAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRGAKMQ*VSLEAA
Trigger: AGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCC...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAGGCTCAGTGATAATGTaGCTGACTCCAAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQGSVIM*LTPSLW
Trigger: CCAGAGACTTGGAGTCAGTCACATTATCACTGAGCC...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTATTTCAGGGCAAATTTaGTCTTTTGGAGCCATCAAC +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCISGQI*SFGAIN
Trigger: GTTGATGGCTCCAAAAGATCAAATTTGCCCTGAAAT...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCAAAGGGCAAGCCTCCTaGGACATCCTCCGAAGACTC +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGKGQAS*DILRRL
Trigger: GAGTCTTCGGAGGATGTCTCAGGAGGCTTGCCCTTT...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGTTCCTGGAGGCAGTCTaGTCCGAGGCAGATCAAAGT +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTFLEAV*SEADQS
Trigger: ACTTTGATCTGCCTCGGATCAGACTGCCTCCAGGAA...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACCTGAAGGCTTGGCGCTaGGGAGCAGACGCCCGGCCG +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNLKAWR*GADARP
Trigger: CGGCCGGGCGTCTGCTCCTCAGCGCCAAGCCTTCAG...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377560.9
CDS-3UTR TCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAGCCCCATCCTCGATGTaGAGGGCGCTTGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTAPSSM*RALAQV
Trigger: AACCTGAGCAAGCGCCCTTCACATCGAGGATGGGGC...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGGTTCAAAAATGTCCATaGAGACAGAATGTCCCTTCG +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWVQKCP*RQNVPS
Trigger: CGAAGGGACATTCTGTCTTCATGGACATTTTTGAAC...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCGGCTGCCTGACAGCGTaGGATATCACTTTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTGCLTA*DITFVS
Trigger: TGAAACAAAAGTGATATCTCACGCTGTCAGGCAGCC...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTGTCTTCAAGATATGGTaGGAGGCGCTGCCCGCAGTA +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTVFKIW*EALPAV
Trigger: TACTGCGGGCAGCGCCTCTCACCATATCTTGAAGAC...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGCGGCATGGTGGCCCATaGGTGCCTGGGTCTGATGCA +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTRHGGP*VPGSDA
Trigger: TGCATCAGACCCAGGCACTCATGGGCCACCATGCCG...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCTGGTATTGTCCAGTGTaGCCAGCCCATTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSWYCPV*PAHWWQ
Trigger: CTGCCACCAATGGGCTGGTCACACTGGACAATACCA...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCTCGGGGCGAAGATATTaGGCAGGGCCATGCGGCAGT +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSSGRRY*AGPCGS
Trigger: ACTGCCGCATGGCCCTGCTCAATATCTTCGCCCCGA...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGGGATCGAGCTGGAGCTaGTGGTGCCGTCTGGGAGAG +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTGSSWS*WCRLGE
Trigger: CTCTCCCAGACGGCACCATCAGCTCCAGCTCGATCC...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTTTGCGGAATCCAGATTaGCTTTCTTTACAAGACACA +
Preference number: 4 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSLRNPD*LSLQDT
Trigger: TGTGTCTTGTAAAGAAAGTCAATCTGGATTCCGCAA...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGTGCGGATGGCGCCTCTaGCTACGCCCTCGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREECGWRL*LRPRPG
Trigger: ACCTGGACGAGGGCGTAGTCAGAGGCGCCATCCGCA...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGTGTAGATCTCGTCTTTaGAGACCCCGCCGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLCRSRL*RPRRGR
Trigger: ACGCCCACGGCGGGGTCTTCAAAGACGAGATCTACA...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAGGTTGTCCAGGGAAGTaGCTGTGTACATGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGGCPGK*LCTWSP
Trigger: TGGGCTCCATGTACACAGTCACTTCCCTGGACAACC...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CCAGGTGCTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATTTCACCATCCAAACTTaGCAAACCAATCAAGTCATT +
Preference number: 4 (lower is better)
Translates to: PGAGRRSQRTGPPARSHHFTIQT*QTNQVI
Trigger: AATGACTTGATTGGTTTGTCAAGTTTGGATGGTGAA...ATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAGCACCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAGGCGGCATAGCTGGTTaGTGTACTGCACAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGGGIAG*CTAQVP
Trigger: TGGCACTTGTGCAGTACATCAACCAGCTATGCCGCC...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGGGAGCCGTGCGGGTGTaGTGGCGAGGTGGCGGCATA +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRREGAVRV*WRGGGI
Trigger: TATGCCGCCACCTCGCCATCACACCCGCACGGCTCC...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR TCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCAGTTCTTATTGACAGCTaGGCTGGGGCACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSVLIDS*AGAQQQ
Trigger: CTGCTGCTGTGCCCCAGCTCAGCTGTCAATAAGAAC...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGTGCTGGGTGGTTCTGTaGTGGGGAACCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTCWVVL*WGTSWG
Trigger: GCCCCAGCTGGTTCCCCATCACAGAACCACCCAGCA...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTTCTAAAGCAGGAAGATaGACACATAAAGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSSKAGR*THKAPC
Trigger: ACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGA...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGTCTAAAGCAGGAAGATaGACACATAAAGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWSKAGR*THKAPC
Trigger: ACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGA...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTAAGCAGACCCCAAATTaGGCAGAGCACCTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLKQTPN*AEHLSP
Trigger: TGGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTT...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATGCCAACAGAAGCTTCTaGACTCCTCCTGGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYANRSF*TPPGEV
Trigger: TACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGC...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCGCCCTGCCTGCTACATaGAAGGTTGAGGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFALPAT*KVEVGW
Trigger: CCACCCCACCTCAACCTTTCATGTAGCAGGCAGGGC...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR GCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCGCTTGCTCAGGTTGCTaGAACAAGCCCTGGCGTTTG +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSACSGC*NKPWRL
Trigger: CAAACGCCAGGGCTTGTTGCAGCAACCTGAGCAAGC...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGGAGAAGACTGCCGCTaGCAAAAGCCACCCATCCTG +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLGEDCR*QKPPIL
Trigger: CAGGATGGGTGGCTTTTGGCAGCGGCAGTCTTCTCC...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGAGGTGGGCTTGTCCCTaGTGTCCTCAATGGCCAGCG +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTRWACP*CPQWPA
Trigger: CGCTGGCCATTGAGGACAGCAGGGACAAGCCCACCT...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCGCTGCACAAGGCCACTaGGTACCAGGCACTTCTCTT +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGAAQGH*VPGTSL
Trigger: AAGAGAAGTGCCTGGTACGCAGTGGCCTTGTGCAGC...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTTTCCGCAGGGCGGCTaGAGCCTCTTCTGTAATCAC +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLFPQGG*SLFCNH
Trigger: GTGATTACAGAAGAGGCTGCAGCCGCCCTGCGGAAA...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGCAAGGCGATCACTTCTaGAGCCATGCTGTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTQGDHF*SHAVCH
Trigger: GTGGCAAACAGCATGGCTGCAGAAGTGATCGCCTTG...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTAAGCCACTACTCCAATaGTTCCTGAAATTCCTCTAC +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSKPLLQ*FLKFLY
Trigger: GTAGAGGAATTTCAGGAAGCATTGGAGTAGTGGCTT...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTACAACATGGACTGGACTaGCTGTACTACCTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLQHGLD*LYYLLS
Trigger: ACTGAGAAGGTAGTACAGGCAGTCCAGTCCATGTTG...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGAACCACTGGCCACATaGCACCAGAGACGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTEPLAT*HQRRLQ
Trigger: TTGAAGACGTCTCTGGTGGCATGTGGCCAGTGGTTC...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCTCCGCTCTGCTTCATTaGGGAAGCGTCTTCGGATGG +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSSALLH*GSVFGW
Trigger: CCATCCGAAGACGCTTCCGCAATGAAGCAGAGCGGA...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAGCCCGATTTCCGCTCTaGTTCATTGCGGAAGCGTCT +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGARFPL*FIAEAS
Trigger: AGACGCTTCCGCAATGAAGCAGAGCGGAAATCGGGC...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGTCCTTCGGTAGCCTaGTGGGGGCCTTTCCAACAT +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGSPSVA*WGPFQH
Trigger: ATGTTGGAAAGGCCCCCAGCAGGCTACCGAAGGACT...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGACAGCAGTTGCAGGTaGTCCAGGGTAATGTCCCGG +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLDSSCR*SRVMSR
Trigger: CCGGGACATTACCCTGGAGCACCTGCAACTGCTGTC...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GTGAATGGCACAACGAAGTTTCTCCAGCATGATTTCCAGAGAGGAGTACTGGGGGTCTGGGAGAGGAGGTaGGAGGAGCTGATTGGACAG +
Preference number: 4 (lower is better)
Translates to: VNGTTKFLQHDFQRGVLGVWERR*EELIGQ
Trigger: CTGTCCAATCAGCTCCTCGCACCTCCTCTCCCAGAC...CCCCAGTACTCCTCTCTGGAAATCATGCTGGAGAAACTTCGTTGTGCCATTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCAGGGGAACTGCTCTGGTaGTGTCTGCAGGAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSGELLW*CLQERA
Trigger: TGCTCTTTCCTGCAGACAGCACCAGAGCAGTTCCCC...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCCACCCGTGCCCACGGTaGCTTGTACAGAGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSHPCPR*LVQRGV
Trigger: GACTCCTCTCTGTACAAGGCACCGTGGGCACGGGTG...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGCTCCTTCACGCAGGCTaGCATGTCCGTGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRLLHAG*HVRGPQ
Trigger: TTGTGGACCACGGACATGGCAGCCTGCGTGAAGGAG...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGCTCCTTCACGCAGGCTaGCATGTCCGTGGTCCACAA +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLLLHAG*HVRGPQ
Trigger: TTGTGGACCACGGACATGGCAGCCTGCGTGAAGGAG...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCCGTGCGCAGGAGCTCTaGCAGGAGATGGAAAACAAG +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSRAQEL*QEMENK
Trigger: CTTGTTTTCCATCTCCTGGCAGAGCTCCTGCGCACG...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCACGTGCGCAGGAGCTCTaGCAGGAGATGGAAAACAAG +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSRAQEL*QEMENK
Trigger: CTTGTTTTCCATCTCCTGGCAGAGCTCCTGCGCACG...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATACCAGGGTGTGCACCGTaGGCAGGAGCTCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIPGCAP*AGALPG
Trigger: TCCTGGCAGAGCTCCTGCGCACGGTGCACACCCTGG...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGGGTCCGAGTCCACGGTaGGGGAAGACTGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEGPSPR*GKTGAC
Trigger: GCAAGCGCCAGTCTTCCCGCACCGTGGACTCGGACC...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCCTCCATGCTGTCTGTaGCGGGGAAGGCCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAPPCCL*RGRPVS
Trigger: AGACACTGGCCTTCCCCGGCACAGACAGCATGGAGG...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCGTCAGGCTCAGCGTCTaGTCTGAATGGGCACAACTC +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSVRLSV*SEWAQL
Trigger: GAGTTGTGCCCATTCAGAGCAGACGCTGAGCCTGAC...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGACCTTCACGGGGTGCTaGTCCTTCCCGGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTTFTGC*SFPALL
Trigger: CAGCAAGGCCGGGAAGGAGCAGCACCCCGTGAAGGT...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATCGGACATCGATGCATaGGCACCTCTCAAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQSDIDA*APLKVK
Trigger: CTTCACTTTGAGAGGTGCGCATGCATCGATGTCCGA...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTGTGGTGTTGAGGGACTaGAGCAAGGCGAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCVVLRD*SKAKRR
Trigger: CCTGCGCTTCGCCTTGCTGCAGTCCCTCAACACCAC...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCGTGGTGTTGAGGGACTaGAGCAAGGCGAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFVVLRD*SKAKRR
Trigger: CCTGCGCTTCGCCTTGCTGCAGTCCCTCAACACCAC...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR GCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAGACGTCTGCCCGAATTaGAATCCCCAGCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTDVCPN*NPQQLP
Trigger: GGGCAGCTGCTGGGGATTGCAATTCGGGCAGACGTC...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTGCTTCCTGCAGGTCTTaGTCAGGGTCCAAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAASCRS*SGSKGS
Trigger: CGAGCCCTTGGACCCTGAGCAAGACCTGCAGGAAGC...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGCCCCTGCGGCTGGGATaGACCCAGCTAGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEPLRLG*TQLGSV
Trigger: CACAGAGCCTAGCTGGGTGCATCCCAGCCGCAGGGG...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCAGTCTGGACCTCAATGTaGTCTCGGAGAAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSVWTSM*SRRSSH
Trigger: GTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGTCTTCCTGGCGGGGCTaGCCAAGGACGCTGCCCGTG +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRRESSWRG*PRTLPV
Trigger: CACGGGCAGCGTCCTTGGGCAGCCCCGCCAGGAAGA...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR GCA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTGGAAAGAGCCGCCTCTaGTTCAAGGAGAAGCAGGAG +
Preference number: 4 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFGKSRL*FKEKQE
Trigger: CTCCTGCTTCTCCTTGAAGCAGAGGCGGCTCTTTCC...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATGCAACGCCGTCTGGCTaGTATAGAGTACCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYATPSG*YRVPAA
Trigger: TGCAGCTGGTACTCTATACCAGCCAGACGGCGTTGC...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCTATGGTCAGAGGCAGTaGAGAGGGGCTCGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSYGQRQ*RGARSK
Trigger: CTTACTCCGAGCCCCTCTCCACTGCCTCTGACCATA...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTTGATCTTTTGGAGCCATCAACAACTGCCAAAGAAGCAATCCCGACCGTCGAAAAGGCCAGCTGGCGCTaGGCATTCCACAGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: FDLLEPSTTAKEAIPTVEKASWR*AFHSPR
Trigger: GCGAGGACTGTGGAATGCCCAGCGCCAGCTGGCCTT...TTCGACGGTCGGGATTGCTTCTTTGGCAGTTGTTGATGGCTCCAAAAGATCAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550724.2
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCTTCTAAGGCCAGCTaGCGCTGGGCATTCCACAGT +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLSSKAS*RWAFHS
Trigger: ACTGTGGAATGCCCAGCGCCAGCTGGCCTTAGAAGA...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCAAGTCAGCAGGCTCCTTaGTCAAGCTCAAAGGCTGGC +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSSQQAP*SSSKAG
Trigger: GCCAGCCTTTGAGCTTGACCAAGGAGCCTGCTGACT...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAGTTTCTCACTGGAGCTaGACTCGGTCTGATTGCTCA +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQVSHWS*TRSDCS
Trigger: TGAGCAATCAGACCGAGTCCAGCTCCAGTGAGAAAC...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACACAGCCCAGGCCATGGTaGCCACCTTCTGCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTQPRPW*PPSASW
Trigger: CCAAGAAGCAGAAGGTGGCCACCATGGCCTGGGCTG...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCGTGGCTCGGGCAAGATaGTTAGTGAGAAGGCTGGAC +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGVARAR*LVRRLD
Trigger: GTCCAGCCTTCTCACTAACCATCTTGCCCGAGCCAC...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCACTGGCTGGCTCAGGATaGCTTTACCTATGTGGCTCC +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSLAGSG*LYLCGS
Trigger: GGAGCCACATAGGTAAAGCCATCCTGAGCCAGCCAG...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTGCCGCCCGGCACAGCTaGAGAATAATAAGGACTAGC +
Preference number: 4 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFAARHS*RIIRTS
Trigger: GCTAGTCCTTATTATTCTCCAGCTGTGCCGGGCGGC...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTGTCCCGGAGGAGGTaGAGTCCCCTCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCLSRRR*SPLSSL
Trigger: GAGAGAACTGAGGGGACTCCACCTCCTCCGGGACAG...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTGTCCCGGAGGAGGTaGAGTCCCCTCAGTTCTCTC +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTALSRRR*SPLSSL
Trigger: GAGAGAACTGAGGGGACTCCACCTCCTCCGGGACAG...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTAGCAATCCGGCATGGTaGCCCATGAGTGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCSNPAW*PMSAWV
Trigger: GACCCAGGCACTCATGGGCCACCATGCCGGATTGCT...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTAGCAATCCGGCATGGTaGCCCATGAGTGCCTGGGTC +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTASNPAW*PMSAWV
Trigger: GACCCAGGCACTCATGGGCCACCATGCCGGATTGCT...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTTACATTATTGCTGTCTaGAGAGCGGGTTACTACTGT +
Preference number: 4 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSYIIAV*RAGYYC
Trigger: ACAGTAGTAACCCGCTCTCCAGACAGCAATAATGTA...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCTCGGATGGCAAATTTTaGCAGAGCAGTTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTSDGKF*QSSSNS
Trigger: GCTGTTGGAACTGCTCTGCCAAAATTTGCCATCCGA...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGGTGCGAGGAGCTGATTaGACAGCAGTTGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLVRGAD*TAVAGA
Trigger: AGCACCTGCAACTGCTGTCCAATCAGCTCCTCGCAC...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATTTCGCTTCACTTTGTaGCCGAGGCCATATACGAGC +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQFRFTL*PRPYTS
Trigger: GCTCGTATATGGCCTCGGCCACAAAGTGAAGCGAAA...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTGACTGCTCCAGGAGGTaGAGACACCCCCAGTTTGAT +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTDCSRR*RHPQFD
Trigger: ATCAAACTGGGGGTGTCTCCACCTCCTGGAGCAGTC...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCAGGGTGAGTGCGCGGTaGAACCACAGCATGTCCTCG +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSRVSAR*NHSMSS
Trigger: CGAGGACATGCTGTGGTTCCACCGCGCACTCACCCT...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGGCAGGCATCGGCGATaGCGTCACTCGTCACGCCCA +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIGRHRR*RHSSRP
Trigger: TGGGCGTGACGAGTGACGCCATCGCCGATGCCTGCC...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGGTATACATGGGTGTCTaGCGCAGCTCCACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTVYMGV*RSSTRG
Trigger: GCCCCTGGTGGAGCTGCGCCAGACACCCATGTATAC...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCGTATACATGGGTGTCTaGCGCAGCTCCACCAGGGGC +
Preference number: 4 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFVYMGV*RSSTRG
Trigger: GCCCCTGGTGGAGCTGCGCCAGACACCCATGTATAC...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGTGCAGCAGGGCTTGTTaGGGCTGTCAGGGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTCSRAC*GCQGSP
Trigger: CGGAGAGCCCTGACAGCCCCAACAAGCCCTGCTGCA...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGCAGCTCCATCTCCAGTaGGCTGAGCATGGTCAGCAG +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLQLHLQ*AEHGQQ
Trigger: CTGCTGACCATGCTCAGCCCACTGGAGATGGAGCTG...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGACGGGCCGCAGTGGTaGCTTCCCAAGCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIDGPQW*LPKPAE
Trigger: CTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCGTC...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATAGGGACGGGCCGCAGTaGTGGCTTCCCAAGCCAGCA +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDRDGPQ*WLPKPA
Trigger: TGCTGGCTTGGGAAGCCACCACTGCGGCCCGTCCCT...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCAGAAGAACTCGATGTGCTGGTCCGTCTCCATCAGCCCCACTTGGTACATGGTTCTTCCAGGAGGCCCTaGAATGTGGACGAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: PEELDVLVRLHQPHLVHGSSRRP*NVDESL
Trigger: CAAACTTTCGTCCACATTCCAGGGCCTCCTGGAAGA...ACCATGTACCAAGTGGGGCTGATGGAGACGGACCAGCACATCGAGTTCTTCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGCTGGAGGGCAGGGCTaGCCACAGGCTTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIAGGQG*PQACLW
Trigger: CCACAGACAAGCCTGTGGCCAGCCCTGCCCTCCAGC...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGACGTGTTTGGGCAATTaGCCCAGCCACCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTTCLGN*PSHLYV
Trigger: CACATAGAGGTGGCTGGGCCAATTGCCCAAACACGT...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATTGTGTCTCACGTGTTTaGGCAATTGGCCCAGCCACC +
Preference number: 4 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYCVSRV*AIGPAT
Trigger: GGTGGCTGGGCCAATTGCCCAAACACGTGAGACACA...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATCTGACTGCTGACGCCTaGAAGGCCAGGGGCCTGGAC +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNLTADA*KARGLD
Trigger: GTCCAGGCCCCTGGCCTTCCAGGCGTCAGCAGTCAG...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATACCAGCTGCACTAGCTaGGGCATCAGGGCATCCGCC +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNTSCTS*GIRASA
Trigger: GGCGGATGCCCTGATGCCTCAGCTAGTGCAGCTGGT...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCTTCCTGGAGGCAGTCTaGTCCGAGGCAGATCAAAGT +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSFLEAV*SEADQS
Trigger: ACTTTGATCTGCCTCGGATCAGACTGCCTCCAGGAA...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGGTTCTACTCTGGGACTaGATAAGGGGGAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLVLLWD*IRGKTS
Trigger: GCTGGTCTTCCCCCTTATTCAGTCCCAGAGTAGAAC...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACAAGTTTCAATTCCATTaGGACAGTCAGCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDKFQFH*DSQQAP
Trigger: AGGAGCCTGCTGACTGTCTCAATGGAATTGAAACTT...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAAGCACCACGCCCCAGTaGGCTTCCAGCAGCATCTAT +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTSTTPQ*ASSSIY
Trigger: ATAGATGCTGCTGGAAGCTCACTGGGGCGTGGTGCT...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGCTGCCCGCAGTATGTaGAGTACACCCGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIAARSM*STPGPW
Trigger: CCAAGGGCCGGGTGTACTTCACATACTGCGGGCAGC...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGTCTTCAAGATATGGTaGGAGGCGCTGCCCGCAGTA +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLVFKIW*EALPAV
Trigger: TACTGCGGGCAGCGCCTCTCACCATATCTTGAAGAC...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACGCAATGGGAGGCGGGTaGGGGTCTGGGCCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNAMGGG*GSGPEV
Trigger: CACCTCTGGCCCAGACCCTCACCCGCCTCCCATTGC...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGAGGCGAGTGAACAAGTaGGGCAACTTCGGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKRRVNK*GNFGAK
Trigger: CTTCGCCCCGAAGTTGCCTCACTTGTTCACTCGCCT...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACTGTGGAAGAGGCGAGTaGACAAGTGAGGCAACTTCG +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDCGRGE*TSEATS
Trigger: CGAAGTTGCCTCACTTGTTCACTCGCCTCTTCCACA...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGGAGACACCCCCAGTTTaGTGTGGACCCTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTETPPV*CGPCLW
Trigger: CCACAGACAGGGTCCACATCAAACTGGGGGTGTCTC...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTGAGACACCCCCAGTTTaGTGTGGACCCTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAETPPV*CGPCLW
Trigger: CCACAGACAGGGTCCACATCAAACTGGGGGTGTCTC...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCCCTTCCATGAGTGCATaGAAATACGTAGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTPSMSA*KYVENL
Trigger: CAGGTTCTCTACGTATTTTCATGCACTCATGGAAGG...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATATTTGGGGCGGTCGCTaGGGTCACCCCACTGGCTGT +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDIWGGR*GHPTGC
Trigger: ACAGCCAGTGGGGTGACCTCAGCGACCGCCCCAAAT...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGAGGAGGACGAGTCACTaGGATTTGGGGCGGTCGCTG +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTRRTSH*DLGRSL
Trigger: CAGCGACCGCCCCAAATCTCAGTGACTCGTCCTCCT...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTTCCTCAGGATCTGGGTaGGCTGATCCTCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTASSGSG*ADPPAP
Trigger: AGGTGCTGGAGGATCAGCTCACCCAGATCCTGAGGA...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCTCTCCAGTGTGGTGTTaGGGGACTGCAGCAAGGCGA +
Preference number: 4 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFSPVWC*GTAARR
Trigger: TCGCCTTGCTGCAGTCCCTCAACACCACACTGGAGA...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR TCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGTCATGGTCAGGTAGGTaGACCTGCAGCAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRSWSGR*TCSRAC
Trigger: ACAAGCCCTGCTGCAGGTTCACCTACCTGACCATGA...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCGAGTGGGTGCCTCAGTaGCAGCCTAATTCTGGGGCT +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSEWVPQ*QPNSGA
Trigger: AGCCCCAGAATTAGGCTGTCACTGAGGCACCCACTC...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGTGCTGGGTGGTTCTGTaGTGGGGAACCAGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREECWVVL*WGTSWG
Trigger: GCCCCAGCTGGTTCCCCATCACAGAACCACCCAGCA...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTTGGCAAGGCCCAAAGTaGCAGTGTCCAACAAGATGG +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTWQGPK*QCPTRW
Trigger: CCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCA...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGAGCGATGTGATTCTGTaGGACCTGGCAAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLSDVIL*DLARPK
Trigger: TTTGGGCCTTGCCAGGTCTCACAGAATCACATCGCT...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CAGGGGCAGGTGAACGGGATGCGCTCCTGGTTGCAGGCAAACTTGATGAACTTGACTCACCTCCAGAGTTaGCTTGCATCCAATACAACT +
Preference number: 4 (lower is better)
Translates to: QGQVNGMRSWLQANLMNLTHLQS*LASNTT
Trigger: AGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGT...CAAGTTCATCAAGTTTGCCTGCAACCAGGAGCGCATCCCGTTCACCTGCCCCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGGGGGAGGCAGCGGGCTaGCCATCTTCTTTCAAAGCA +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKGEAAG*PSSFKA
Trigger: TGCTTTGAAAGAAGATGGTCAGCCCGCTGCCTCCCC...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAAGGGCAGTTGTGACCTaGTGTAGCATTTCCAACACT +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQRAVVT*CSISNT
Trigger: AGTGTTGGAAATGCTACAGCAGGTCACAACTGCCCT...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGCATCAGGGAACAGCCTaGACTTCTGGTCTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRHQGTA*TSGLVH
Trigger: GTGCACCAGACCAGAAGTGCAGGCTGTTCCCTGATG...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CAATCCCGACCGTCGAATGATGTCTCGATTCCTTTCAGTTTGTGGGCTGAAGAACGGATCAGCCCGTCGTaGAGGAAGATGGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QSRPSNDVSIPFSLWAEERISPS*RKMVSS
Trigger: GGAAGAGACCATCTTCCTGCACGACGGGCTGATCCG...TTCTTCAGCCCACAAACTGAAAGGAATCGAGACATCATTCGACGGTCGGGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550724.2
CDS-3UTR GCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGCCGGTGGAGAAGACTaGCGCTGCCAAAAGCCACCC +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIAGGED*RCQKPP
Trigger: GGGTGGCTTTTGGCAGCGGCAGTCTTCTCCACCGGC...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCCCGCCACCTTGTCTGTaGAGCCAAAAGGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSPPPCL*SQKETA
Trigger: AGCAGTTTCCTTTTGGCTGCACAGACAAGGTGGCGG...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCGAACCACTGGCCACATaGCACCAGAGACGTCTTCAA +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGEPLAT*HQRRLQ
Trigger: TTGAAGACGTCTCTGGTGGCATGTGGCCAGTGGTTC...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGATTGTCACTGTCAGATaGCATGGCGAAAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLIVTVR*HGERQG
Trigger: GCCCTGCCTTTCGCCATGGCATCTGACAGTGACAAT...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAATGGTGGCCCATGAGTaGCTGGGTCTGATGCAATAC +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGMVAHE*LGLMQY
Trigger: GTATTGCATCAGACCCAGGCACTCATGGGCCACCAT...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAACCTTGGTCTCCCATaGTTTCACCAGCAGGGCGTA +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGNLGLP*FHQQGV
Trigger: TACGCCCTGCTGGTGAAAGCATGGGAGACCAAGGTT...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGGCCCGATTTCCGCTCTaGTTCATTGCGGAAGCGTCT +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRARFPL*FIAEAS
Trigger: AGACGCTTCCGCAATGAAGCAGAGCGGAAATCGGGC...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CCAGAAGAACTCGATGTGCTGGTCCGTCTCCATCAGCCCCACTTGGTACATGGTTGCTGGCTACATTATTaGTGTCTGGAGAGCGGGTTA +
Preference number: 4 (lower is better)
Translates to: PEELDVLVRLHQPHLVHGCWLHY*CLESGL
Trigger: TAACCCGCTCTCCAGACAGCAATAATGTAGCCAGCA...ACCATGTACCAAGTGGGGCTGATGGAGACGGACCAGCACATCGAGTTCTTCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCACCAGCACACCTTCACTaGGGAGGTACGTTTCTACCT +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSPAHLH*GGTFLP
Trigger: AGGTAGAAACGTACCTCCGCAGTGAAGGTGTGCTGG...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCCCAGCACACCTTCACTaGGGAGGTACGTTTCTACCT +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSPAHLH*GGTFLP
Trigger: AGGTAGAAACGTACCTCCGCAGTGAAGGTGTGCTGG...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCAGTTCTGGGAATGGATaGAATGCTGTAAAGACTGCG +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTSSGNG*NAVKTA
Trigger: CGCAGTCTTTACAGCATTGCATCCATTCCCAGAACT...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATTCACTGTCTGGGAGTTaGCCTGGTAAAAGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYSLSGS*PGKRGP
Trigger: CGGACCTCTTTTACCAGGGCAACTCCCAGACAGTGA...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACCTCTCCTCGCCCTGGTaGAGGGTCCGGGTGATGGCC +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNLSSPW*RVRVMA
Trigger: GGCCATCACCCGGACCCTGCACCAGGGCGAGGAGAG...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGGGGGAACTGCTCTGGTaGTGTCTGCAGGAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRGELLW*CLQERA
Trigger: TGCTCTTTCCTGCAGACAGCACCAGAGCAGTTCCCC...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTATATACGAGCACCCGTaGCCACGGTGCCTTGTACAG +
Preference number: 4 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACIYEHP*PRCLVQ
Trigger: CTGTACAAGGCACCGTGGGCACGGGTGCTCGTATAT...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGCGTGCGCAGGAGCTCTaGCAGGAGATGGAAAACAAG +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRRAQEL*QEMENK
Trigger: CTTGTTTTCCATCTCCTGGCAGAGCTCCTGCGCACG...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATCCAGGCTGCCGGTGCTaGACAGGGAAATGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNPGCRC*TGKCPG
Trigger: GCCTGGACATTTCCCTGTGCAGCACCGGCAGCCTGG...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCCCAGGCTGCCCAGGCTaGCGGTGCTGCACAGGGAAA +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSPGCPG*RCCTGK
Trigger: TTTCCCTGTGCAGCACCGGCAGCCTGGGCAGCCTGG...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGTCAGCAGGGCGGCGATaGTGTGGGTATACATGGGTG +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTSAGRR*CGYTWV
Trigger: CACCCATGTATACCCACAGCATCGCCGCCCTGCTGA...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGTGGTCCGCTGTCCTCTaGACAGTGGCATTCAGCACT +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLWSAVL*TVAFST
Trigger: AGTGCTGAATGCCACTGTGCAGAGGACAGCGGACCA...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGGACGTCTGCCCGAATTaGAATCCCCAGCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTDVCPN*NPQQLP
Trigger: GGGCAGCTGCTGGGGATTGCAATTCGGGCAGACGTC...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTAGGATATCCGCTTCCTaGAGGTCTTGCTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACRISAS*RSCSGS
Trigger: GGACCCTGAGCAAGACCTGCAGGAAGCGGATATCCT...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCCAGGCTCCGGATGGCTaGCGCGTAGATGTCCTTGTT +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSQAPDG*RVDVLV
Trigger: AACAAGGACATCTACGCGGCAGCCATCCGGAGCCTG...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGCAGAAGAACTCGATGTaGTGGTCCGTCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLQKNSM*WSVSIS
Trigger: GCTGATGGAGACGGACCAGCACATCGAGTTCTTCTG...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTCAGAAGAACTCGATGTaGTGGTCCGTCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTQKNSM*WSVSIS
Trigger: GCTGATGGAGACGGACCAGCACATCGAGTTCTTCTG...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCCCCCTGCGGCTGGGATaGACCCAGCTAGGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSPLRLG*TQLGSV
Trigger: CACAGAGCCTAGCTGGGTGCATCCCAGCCGCAGGGG...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCCTTGTCCTACGTCACTaGAGGGAGGAAGGGCCATTT +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSLVLRH*REEGPF
Trigger: AAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAG...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCCTGGCCCTGGTGTCTTaGAGGTCACCTCTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFLALVS*RSPLSS
Trigger: GGAAGAGAGAGGTGACCTGCAAGACACCAGGGCCAG...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR GCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGGCTGCCCAAGGACGCTaGCCGTGGATTCTGGCCCTG +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRREAAQGR*PWILAL
Trigger: CAGGGCCAGAATCCACGGGCAGCGTCCTTGGGCAGC...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTCACATCGCACCAACGTaGTGCAATAATTGGTTTATA +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFHIAPT*CNNWFI
Trigger: TATAAACCAATTATTGCACCACGTTGGTGCGATGTG...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATAGCAAAAACCGGACACTaGGTTTTAAGCAGCAACGCC +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIAKTGH*VLSSNA
Trigger: GGCGTTGCTGCTTAAAACCCAGTGTCCGGTTTTTGC...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGCTCTGTCTTCCTCTATaGTCAGAGGCAGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLLCLPL*SEAVER
Trigger: CCTCTCCACTGCCTCTGACCATAGAGGAAGACAGAG...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGCGTCGTGCAGGAAGATaGTCTCTTCCTTCACCGAGA +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLRRAGR*SLPSPR
Trigger: TCTCGGTGAAGGAAGAGACCATCTTCCTGCACGACG...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTGTGTGTTGGAGATGGTaGAACCAGTCAGGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTVCWRW*NQSGQQ
Trigger: TTGCTGCCCTGACTGGTTCCACCATCTCCAACACAC...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCGTGTGTTGGAGATGGTaGAACCAGTCAGGGCAGCAA +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSVCWRW*NQSGQQ
Trigger: TTGCTGCCCTGACTGGTTCCACCATCTCCAACACAC...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAACCTCTTTCAGTGTGTTaGAGATGGTGGAACCAGTCA +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQPLSVC*RWWNQS
Trigger: TGACTGGTTCCACCATCTCCAACACACTGAAAGAGG...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCAAAGGACCATCGTCACTaGACCCACAAGATGCGTCAC +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSKDHRH*THKMRH
Trigger: GTGACGCATCTTGTGGGTCCAGTGACGATGGTCCTT...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGGACACACAAGCTGGCTaGCTCAGGATGGCTTTACCT +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLDTQAG*LRMALP
Trigger: AGGTAAAGCCATCCTGAGCCAGCCAGCTTGTGTGTC...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATATTTGGACACACAAGCTaGCTGGCTCAGGATGGCTTT +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIFGHTS*LAQDGF
Trigger: AAAGCCATCCTGAGCCAGCCAGCTTGTGTGTCCAAA...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGCGCAACAGCCACCCTTaGTCATGTCTCGATCCATCT +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLRNSHP*SCLDPS
Trigger: AGATGGATCGAGACATGACCAAGGGTGGCTGTTGCG...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTGGAAGCAACATGGACTaGACTGCCTGTACTACCTTC +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLGSNMD*TACTTF
Trigger: GAAGGTAGTACAGGCAGTCCAGTCCATGTTGCTTCC...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGAGCCAAAGGAAACTATaGGTCCGGTGTCATCATCGG +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTSQRKL*VRCHHR
Trigger: CCGATGATGACACCGGACCCATAGTTTCCTTTGGCT...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTTTTCATCATCTGCAATaGGAGGCGGGTGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTFHHLQ*EAGEGL
Trigger: CAGACCCTCACCCGCCTCCCATTGCAGATGATGAAA...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGCTGATGGTGCCGTCTaGGAGAGGAGGTGCGAGGAG +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIADGAV*ERRCEE
Trigger: CTCCTCGCACCTCCTCTCCCAGACGGCACCATCAGC...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCTCCTTCCTGGTGAGGTaGCGGAGGATGATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSSFLVR*RRMMSR
Trigger: CCTGCTCATCATCCTCCGCCACCTCACCAGGAAGGA...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCCACGCCCAGCCCCTGTaGGTCCTTCCTGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSHAQPL*VLPGEV
Trigger: CACCTCACCAGGAAGGACCCACAGGGGCTGGGCGTG...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATACCTCGTCCAGGTGGGTaGGGATCCCGGAGATCACCA +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIPRPGG*GSRRSP
Trigger: TGGTGATCTCCGGGATCCCCACCCACCTGGACGAGG...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAGGTGTGATGGCGAGGTaGCGGCATAGCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTGVMAR*RHSWLM
Trigger: CATCAACCAGCTATGCCGCCACCTCGCCATCACACC...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGGGAGACAGGCCACTCTaGGGTCAGCAGCATCCGCGG +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRREGDRPL*GQQHPR
Trigger: CCGCGGATGCTGCTGACCCCAGAGTGGCCTGTCTCC...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGGCGCAGGCTCTCGATaGGCACGTTCAGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDGAGSR*ARSGDR
Trigger: CCTGTCTCCTGAACGTGCCCATCGAGAGCCTGCGCC...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGAGGGCGGCGATGCTGTaGGTATACATGGGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTRAAML*VYMGVW
Trigger: CCAGACACCCATGTATACCCACAGCATCGCCGCCCT...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCTCCGTGGCCAGGTGCTaGGAGGCGATCTCAGCGCAC +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSSVARC*EAISAH
Trigger: GTGCGCTGAGATCGCCTCCCAGCACCTGGCCACGGA...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCACTTGGTACATGGTGTaGGCCTTGAGGAACTCGAGG +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSTWYMV*ALRNSR
Trigger: CCTCGAGTTCCTCAAGGCCCACACCATGTACCAAGT...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGAAGAACTCGATGTGCTaGTCCGTCTCCATCAGCCCC +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLKNSMC*SVSISP
Trigger: GGGGCTGATGGAGACGGACCAGCACATCGAGTTCTT...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTTTGCACAGCTCCTCCTaGGTGAACATCTCCAGGGCC +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTALHSSS*VNISRA
Trigger: GGCCCTGGAGATGTTCACCCAGGAGGAGCTGTGCAA...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACAACGGGATGCGCTCCTaGTTGCAGGCAAACTTGATG +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDNGMRS*LQANLM
Trigger: CATCAAGTTTGCCTGCAACCAGGAGCGCATCCCGTT...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTGACGGGCCGCAGTGGTaGCTTCCCAAGCCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIDGPQW*LPKPAE
Trigger: CTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCGTC...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCCGGCTTCCTGCTGGGTaGTTCTGTGATGGGGAACCA +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSRLPAG*FCDGEP
Trigger: TGGTTCCCCATCACAGAACCACCCAGCAGGAAGCCG...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCGGCTTCCTGCTGGGTaGTTCTGTGATGGGGAACCA +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCRLPAG*FCDGEP
Trigger: TGGTTCCCCATCACAGAACCACCCAGCAGGAAGCCG...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGCCACAGGCTTGTCTGTaGAGGCGCTCTGCTGAAAGC +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTPQACL*RRSAES
Trigger: GCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGG...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTCCAGCCACCTCTATGTaGAGGGAGGCCTGCTGGGGC +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIPATSM*REACWG
Trigger: GCCCCAGCAGGCCTCCCTCCACATAGAGGTGGCTGG...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAACGTGTTTGGGCAATTaGCCCAGCCACCTCTATGTG +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGTCLGN*PSHLYV
Trigger: CACATAGAGGTGGCTGGGCCAATTGCCCAAACACGT...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCCGTGGATTCTGGCCCTaGTGTCTTGCAGGTCACCTC +
Preference number: 4 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFRGFWP*CLAGHL
Trigger: GAGGTGACCTGCAAGACACCAGGGCCAGAATCCACG...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR TCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTATCCCGACCGTCGAATaGTGTCTCGATTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTIPTVE*CLDSFQ
Trigger: CTGAAAGGAATCGAGACATCATTCGACGGTCGGGAT...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTACAAGAGCCAAAATACTaGCTTTTAGCTCCTGTACCT +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLQEPKY*LLAPVP
Trigger: AGGTACAGGAGCTAAAAGTCAGTATTTTGGCTCTTG...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550722.5
CDS-3UTR TCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGCCCCATCCTCGATGTaGAGGGCGCTTGCTCAGGTT +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIAPSSM*RALAQV
Trigger: AACCTGAGCAAGCGCCCTTCACATCGAGGATGGGGC...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCCTAGTATTTGCTGCTTaGTCCTCTTTCAGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTLVFAA*SSFSVL
Trigger: CAACACACTGAAAGAGGATCAAGCAGCAAATACTAG...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCTGCCTGACAGCGTaGGATATCACTTTTGTTTCA +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTGCLTA*DITFVS
Trigger: TGAAACAAAAGTGATATCTCACGCTGTCAGGCAGCC...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGACAGGTCAGAAGGAGCTaGCATGCTGCGAAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGQVRRS*HAAKKN
Trigger: GTTTTTCTTCGCAGCATGTCAGCTCCTTCTGACCTG...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGACCATCCCACCACATGTaGGTTCTTCAATTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGPSHHM*VLQFWV
Trigger: GACCCAGAATTGAAGAACTCACATGTGGTGGGATGG...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTATATTTGAGCAGCATTTaGTTCAGGTGCCATGAGCAA +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLYLSSI*FRCHEQ
Trigger: TTGCTCATGGCACCTGAATCAAATGCTGCTCAAATA...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGGAGAGACTTCCCTCCTaGGGAAGCAACATGGACTGG +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTERLPS*GSNMDW
Trigger: CCAGTCCATGTTGCTTCCTCAGGAGGGAAGTCTCTC...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGCAGGAAGTGAGGTGTaGATAGAGAGACTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLAGSEV*IERLPS
Trigger: GGAGGGAAGTCTCTCTATTCACACCTCACTTCCTGC...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTGCAGGAAGTGAGGTGTaGATAGAGAGACTTCCCTCC +
Preference number: 4 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACAGSEV*IERLPS
Trigger: GGAGGGAAGTCTCTCTATTCACACCTCACTTCCTGC...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTTGGTATTGTCCAGTGTaGCCAGCCCATTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAWYCPV*PAHWWQ
Trigger: CTGCCACCAATGGGCTGGTCACACTGGACAATACCA...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACTGCTGCCTCCGATGCTaGGCACGGTGGGGTCCGAGT +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNCCLRC*ARWGPS
Trigger: ACTCGGACCCCACCGTGCTCAGCATCGGAGGCAGCA...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAGGTTGTCCAGGGAAGTaGCTGTGTACATGGAGCCCA +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTGCPGK*LCTWSP
Trigger: TGGGCTCCATGTACACAGTCACTTCCCTGGACAACC...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTAAATGTCAGAGACTCTaGTGGGCTTCGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTKCQRL*WASLVS
Trigger: TGACACCAGCGAAGCCCATCAGAGTCTCTGACATTT...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCGGCGGCATAGCTGGTTaGTGTACTGCACAAGTGCCA +
Preference number: 4 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFGGIAG*CTAQVP
Trigger: TGGCACTTGTGCAGTACATCAACCAGCTATGCCGCC...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR TCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCGTGGAGGCGCTCTGCTaGAAGCACGAGCGCTCTGTG +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSVEALC*KHERSV
Trigger: CACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCAC...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCGAACTAAGGTCGGGATaGACCCTTAAGTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGELRSG*TLKSPA
Trigger: AGCAGGAGACTTAAGGGTTCATCCCGACCTTAGTTC...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTGTCTCCATCTGGACTTaGGTGTCTGGGTCACTAAAG +
Preference number: 4 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFVSIWT*VSGSLK
Trigger: CTTTAGTGACCCAGACACTCAAGTCCAGATGGAGAC...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATCACACTTACATGGGGTaGTGGGGAGTGCTGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNHTYMG*WGVLGG
Trigger: CCCACCCAGCACTCCCCATCACCCCATGTAAGTGTG...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGGGCCTGTGCTGCTCATaGACAAAGTACCACTGGACA +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRGLCCS*TKYHWT
Trigger: TGTCCAGTGGTACTTTGTTCATGAGCAGCACAGGCC...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGCAGGAGCAGTCAGGCTaGGATCTCGGCCAGGTGGCT +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRREQEQSG*DLGQVA
Trigger: AGCCACCTGGCCGAGATCTCAGCCTGACTGCTCCTG...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR TCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGGGCAGGTGCAGGCACTaGCCTTTGGCCTCCTTCAGC +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRREGRCRH*PLASFS
Trigger: GCTGAAGGAGGCCAAAGGTCAGTGCCTGCACCTGCC...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR TCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGCATGACCTTGGGAAGTaGCTTGGCTTTGTAGAGTCC +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLHDLGK*LGFVES
Trigger: GGACTCTACAAAGCCAAGTCACTTCCCAAGGTCATG...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCCTAAGACACTACGGCTaGCATATCCCAGTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSLRHYG*HIPVCC
Trigger: GCAACACACTGGGATATGGCAGCCGTAGTGTCTTAG...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGCCTGAGCGCGAACTGTaGAAGCAAAGCCCCACATGG +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTPEREL*KQSPTW
Trigger: CCATGTGGGGCTTTGCTTGCACAGTTCGCGCTCAGG...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TTGGTTAGGATCACATCCCGTAGCTGGGAGAGTCCACTGTTTCTCTCTCCTTCTGCCGGGCATAGGCATTaGTCTGATTCCCACAAACAG +
Preference number: 4 (lower is better)
Translates to: LVRITSRSWESPLFLSPSAGHRH*SDSHKQ
Trigger: CTGTTTGTGGGAATCAGAGCAATGCCTATGCCCGGC...AGAAGGAGAGAGAAACAGTGGACTCTCCCAGCTACGGGATGTGATCCTAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550724.2
CDS-3UTR GCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTGCTTGCTCAGGTTGCTaGAACAAGCCCTGGCGTTTG +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCACSGC*NKPWRL
Trigger: CAAACGCCAGGGCTTGTTGCAGCAACCTGAGCAAGC...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGGATGTGAAGGGCGCTTaGTCAGGTTGCTGCAACAAG +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRDVKGA*SGCCNK
Trigger: CTTGTTGCAGCAACCTGAGCAAGCGCCCTTCACATC...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAGCAGCATTTTCTTTTTaGTTATGTGGGATGTGTCGG +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLAAFSF*LCGMCR
Trigger: CCGACACATCCCACATAAGCAAAAAGAAAATGCTGC...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTGCCGGTGGAGAAGACTaGCGCTGCCAAAAGCCACCC +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIAGGED*RCQKPP
Trigger: GGGTGGCTTTTGGCAGCGGCAGTCTTCTCCACCGGC...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTGCATCACCAAGTAGGTaGCACAGGTATATATGGGTG +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLASPSR*HRYIWV
Trigger: CACCCATATATACCTGTGGCACCTACTTGGTGATGC...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTTCAACCAAGTTCAAGTaGTTAATAACACAAGATACC +
Preference number: 4 (lower is better)
Translates to: AGHRLVCGGALLKARALCSTKFK*LITQDT
Trigger: GGTATCTTGTGTTATTAAGCACTTGAACTTGGTTGA...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGTCACTTCTGCAGCCATaGTGTTTGCCACATGCCCAC +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRSLLQP*CLPHAH
Trigger: GTGGGCATGTGGCAAACAGCATGGCTGCAGAAGTGA...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGGGCAACGGCCTGGCGTaGAATTCTCTGAAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKGNGLA*NSLKFG
Trigger: GCCAAACTTCAGAGAATTGCACGCCAGGCCGTTGCC...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCACAGGTCAGCAGCATTaGGGTGGGCCTGCCCTTCCG +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSTGQQH*GGPALP
Trigger: CGGAAGGGCAGGCCCACCGCAATGCTGCTGACCTGT...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGATTGTCACTGTCAGATaGCATGGCGAAAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRIVTVR*HGERQG
Trigger: GCCCTGCCTTTCGCCATGGCATCTGACAGTGACAAT...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGATGGTGGCCCATGAGTaGCTGGGTCTGATGCAATAC +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLMVAHE*LGLMQY
Trigger: GTATTGCATCAGACCCAGGCACTCATGGGCCACCAT...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCGCCCGATTTCCGCTCTaGTTCATTGCGGAAGCGTCT +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSARFPL*FIAEAS
Trigger: AGACGCTTCCGCAATGAAGCAGAGCGGAAATCGGGC...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCTGCTCTGGTGCTGTCTaGAGGAAAGAGCAGATCTGT +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSCSGAV*RKEQIC
Trigger: ACAGATCTGCTCTTTCCTGCAGACAGCACCAGAGCA...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAGGGGAACTGCTCTGGTaGTGTCTGCAGGAAAGAGCA +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTGELLW*CLQERA
Trigger: TGCTCTTTCCTGCAGACAGCACCAGAGCAGTTCCCC...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCCACAACAACAAAAGCTaGCCCGGGGAAATTCACGTC +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGHNNKS*PGEIHV
Trigger: GACGTGAATTTCCCCGGGGCAGCTTTTGTTGTTGTG...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCACACAACAACAAAAGCTaGCCCGGGGAAATTCACGTC +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSHNNKS*PGEIHV
Trigger: GACGTGAATTTCCCCGGGGCAGCTTTTGTTGTTGTG...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAAGCAGCTCCACCACCTaGAGGAGGACGGATGTCGGA +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPISSSTT*RRTDVG
Trigger: TCCGACATCCGTCCTCCTGCAGGTGGTGGAGCTGCT...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAGGTCCGAGTCCACGGTaGGGGAAGACTGGCGCTTGC +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTGPSPR*GKTGAC
Trigger: GCAAGCGCCAGTCTTCCCGCACCGTGGACTCGGACC...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGTTTGGGAGATGCCCTaGGAGCTGCAGATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIVWEMP*ELQMEA
Trigger: GGCCTCCATCTGCAGCTCGCAGGGCATCTCCCAAAC...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGGTTTGGGAGATGCCCTaGGAGCTGCAGATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEVWEMP*ELQMEA
Trigger: GGCCTCCATCTGCAGCTCGCAGGGCATCTCCCAAAC...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGCCAGGCTGCCCAGGCTaGCGGTGCTGCACAGGGAAA +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMPGCPG*RCCTGK
Trigger: TTTCCCTGTGCAGCACCGGCAGCCTGGGCAGCCTGG...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTGTCAGGCTCAGCGTCTaGTCTGAATGGGCACAACTC +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCVRLSV*SEWAQL
Trigger: GAGTTGTGCCCATTCAGAGCAGACGCTGAGCCTGAC...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCACATGTCGGACATCGATaGATGCGCACCTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSHVGHR*MRTSQS
Trigger: ACTTTGAGAGGTGCGCATGCATCGATGTCCGACATG...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGGATGTACTGCACAAGTaGCACGTCCATCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRDVLHK*HVHLQG
Trigger: ACCCTGGAGATGGACGTGGCACTTGTGCAGTACATC...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAGACAGCGAGGAACTCTaGAGCTCCTTACACACCTGC +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTDSEEL*SSLHTC
Trigger: GCAGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTC...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGCATGGTCAGCAGCTaGAGGGGGATGATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNSMVSS*RGMMEP
Trigger: GGGCTCCATCATCCCCCTGCAGCTGCTGACCATGCT...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGGGAAAAGCAAAATGTTaGCAACTCCTCACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLGKAKC*QLLTQG
Trigger: GCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCC...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACGAGGCCTGCTGGGGCTaGCTCTGGAGCAACTCCAGC +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNEACWG*LWSNSS
Trigger: GCTGGAGTTGCTCCAGAGGCAGCCCCAGCAGGCCTC...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCAAGAGCCATCCAAGCATaGCAGCCTTTGAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSRAIQA*QPLNLL
Trigger: GAGCAAGTTCAAAGGCTGGCATGCTTGGATGGCTCT...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACATCACATCCCGTAGCTaGGAGAGTCCACTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDITSRS*ESPLFL
Trigger: GAGAAACAGTGGACTCTCCCAGCTACGGGATGTGAT...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTCTTTAGAGACAGTTTaGCACTTGGTGATTAAGATA +
Preference number: 4 (lower is better)
Translates to: PHSKELWPLGRQRADHLLSLETV*HLVIKI
Trigger: TATCTTAATCACCAAGTGCCAAACTGTCTCTAAAGA...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTGCAACGCCGTCTGGCTaGTATAGAGTACCAGCTGCA +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCATPSG*YRVPAA
Trigger: TGCAGCTGGTACTCTATACCAGCCAGACGGCGTTGC...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCGCAAAAACCGGACACTaGGTTTTAAGCAGCAACGCC +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSAKTGH*VLSSNA
Trigger: GGCGTTGCTGCTTAAAACCCAGTGTCCGGTTTTTGC...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTTTGTCTCTGACGGGGTaGACTGTTTCCACAGTCTTT +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLLSLTG*TVSTVF
Trigger: AAAGACTGTGGAAACAGTCCACCCCGTCAGAGACAA...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGAGTGAGACGCCATGTTaGGGGCGGGGCTCCCGGCAT +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMSETPC*GRGSRH
Trigger: ATGCCGGGAGCCCCGCCCCCAACATGGCGTCTCACT...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377560.9
CDS-3UTR CCA 90 bp TTGGTTAGGATCACATCCCGTAGCTGGGAGAGTCCACTGTTTCTCTCTCCTTCTCGTCGTGCAGGAAGATaGTCTCTTCCTTCACCGAGA +
Preference number: 4 (lower is better)
Translates to: LVRITSRSWESPLFLSPSRRAGR*SLPSPR
Trigger: TCTCGGTGAAGGAAGAGACCATCTTCCTGCACGACG...AGAAGGAGAGAGAAACAGTGGACTCTCCCAGCTACGGGATGTGATCCTAACCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550724.2
CDS-3UTR CCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCAAAGGAAACTGCTGCTaGACACAGCTTGGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSKGNCC*TQLGQG
Trigger: ACCCTGACCAAGCTGTGTCCAGCAGCAGTTTCCTTT...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCACTTCTCTTCGCTCCTaGTGTAAGGTATGGTACATA +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTTSLRS*CKVWYI
Trigger: TATGTACCATACCTTACACCAGGAGCGAAGAGAAGT...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACTGGTCTGTTTCTCACTaGAGCTGGACTCGGTCTGAT +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDWSVSH*SWTRSD
Trigger: ATCAGACCGAGTCCAGCTCCAGTGAGAAACAGACCA...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGAGAGTAGCTCCAGGGTaGGAGCTCCACGTTTCCACA +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKRVAPG*ELHVST
Trigger: TGTGGAAACGTGGAGCTCCCACCCTGGAGCTACTCT...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACTACTTAGCAATGGCTaGAGGACTTCATGGGATGAC +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPILLSNG*RTSWDD
Trigger: GTCATCCCATGAAGTCCTCCAGCCATTGCTAAGTAG...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCACTGTGCCCACTTGGTaGCTTTCCGCAGGGCGGCTG +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSTVPTW*LSAGRL
Trigger: CAGCCGCCCTGCGGAAAGCCACCAAGTGGGCACAGT...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTCTGTCTTCTAAAAGCTaGGCCATGACCAGGCATGCT +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTLSSKS*AMTRHA
Trigger: AGCATGCCTGGTCATGGCCCAGCTTTTAGAAGACAG...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGCTGTCTTCTAAAAGCTaGGCCATGACCAGGCATGCT +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLLSSKS*AMTRHA
Trigger: AGCATGCCTGGTCATGGCCCAGCTTTTAGAAGACAG...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACACTGCAAAGGAGGTGGTaGGGGCCGAGCACAGTCCCG +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTLQRRW*GPSTVP
Trigger: CGGGACTGTGCTCGGCCCCCACCACCTCCTTTGCAG...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATAAGACAAGTGCCCACTaGATTAGTCCAAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYKTSAH*ISPSPI
Trigger: GATGGGGCTTGGACTAATCCAGTGGGCACTTGTCTT...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACAAGACAAGTGCCCACTaGATTAGTCCAAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDKTSAH*ISPSPI
Trigger: GATGGGGCTTGGACTAATCCAGTGGGCACTTGTCTT...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTGCTCGGCCGTTGTTATaGAAAAGACAAGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTARPLL*KRQVPT
Trigger: AGTGGGCACTTGTCTTTTCCATAACAACGGCCGAGC...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATTCAGCATCCCTCGGATaGCAAATTTTGGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYSASLG*QILAEQ
Trigger: CTGCTCTGCCAAAATTTGCCATCCGAGGGATGCTGA...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCGGATGGCAGGGATGTaGAAGAGGCGAGTGAACAAG +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTARMAGM*KRRVNK
Trigger: CTTGTTCACTCGCCTCTTCCACATCCCTGCCATCCG...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGCGGATGGCAGGGATGTaGAAGAGGCGAGTGAACAAG +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKRMAGM*KRRVNK
Trigger: CTTGTTCACTCGCCTCTTCCACATCCCTGCCATCCG...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAAGGCTCTCCTCGCCCTaGTGCAGGGTCCGGGTGATG +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTRLSSP*CRVRVM
Trigger: CATCACCCGGACCCTGCACCAGGGCGAGGAGAGCCT...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTTTCGCTTCACTTTGTaGCCGAGGCCATATACGAGC +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLFRFTL*PRPYTS
Trigger: GCTCGTATATGGCCTCGGCCACAAAGTGAAGCGAAA...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGGACTGCTCCAGGAGGTaGAGACACCCCCAGTTTGAT +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTDCSRR*RHPQFD
Trigger: ATCAAACTGGGGGTGTCTCCACCTCCTGGAGCAGTC...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGGGACGGATGTCGGAATaGTGTCAGGCTCATCTTCGG +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTGRMSE*CQAHLR
Trigger: CCGAAGATGAGCCTGACACCATTCCGACATCCGTCC...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCAGGCTGCCATGTCCGTaGTCCACAAGAAGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSRLPCP*STRSFL
Trigger: TAGGAAACTTCTTGTGGACCACGGACATGGCAGCCT...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATAGGGTGAGTGCGCGGTaGAACCACAGCATGTCCTCG +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDRVSAR*NHSMSS
Trigger: CGAGGACATGCTGTGGTTCCACCGCGCACTCACCCT...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACCACGCCCAGCCCCTGTaGGTCCTTCCTGGTGAGGTG +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNHAQPL*VLPGEV
Trigger: CACCTCACCAGGAAGGACCCACAGGGGCTGGGCGTG...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACTTGAAGACCCCGCCGTaGGCGTTGCAGGCCTTGCGG +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNLKTPP*ALQALR
Trigger: CCGCAAGGCCTGCAACGCCCACGGCGGGGTCTTCAA...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGCCGTCAGAACCTCTCTaGCTCCGGGCACCAGCTTCT +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEPSEPL*LRAPAS
Trigger: AGAAGCTGGTGCCCGGAGCCAGAGAGGTTCTGACGG...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTGGCGCAGGCTCTCGATaGGCACGTTCAGGAGACAGG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIGAGSR*ARSGDR
Trigger: CCTGTCTCCTGAACGTGCCCATCGAGAGCCTGCGCC...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCATCCCACAATTTCCAGTaGGTCCAAGGTGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSSHNFQ*VQGDLR
Trigger: CCTGAGATCACCTTGGACCCACTGGAAATTGTGGGA...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTACTTGGTACATGGTGTaGGCCTTGAGGAACTCGAGG +
Preference number: 4 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACTWYMV*ALRNSR
Trigger: CCTCGAGTTCCTCAAGGCCCACACCATGTACCAAGT...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCTCCATCAGCCCCACTTaGTACATGGTGTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSSISPT*YMVWAL
Trigger: CAAGGCCCACACCATGTACCAAGTGGGGCTGATGGA...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGTCCAGAGAGGAGTACTaGGGAAGCTTGATCATGAAC +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTSREEY*GSLIMN
Trigger: GTTCATGATCAAGCTTCCCCAGTACTCCTCTCTGGA...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTATGTGGACGAAAGTTTaGAAAAGCAAAATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFMWTKV*KSKMLP
Trigger: TGGCAACATTTTGCTTTTCCAAACTTTCGTCCACAT...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTTCTTCCAGGAGGCCCTaGAATGTGGACGAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTSSRRP*NVDESL
Trigger: CAAACTTTCGTCCACATTCCAGGGCCTCCTGGAAGA...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGCGGCTTCCTGCTGGGTaGTTCTGTGATGGGGAACCA +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTRLPAG*FCDGEP
Trigger: TGGTTCCCCATCACAGAACCACCCAGCAGGAAGCCG...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTTGCTGGGGCTGCCTCTaGAGCAACTCCAGCTCGAGG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRICWGCL*SNSSSR
Trigger: CCTCGAGCTGGAGTTGCTCCAGAGGCAGCCCCAGCA...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTGAGGCAGCTCAGCCCTaGCATACACACTTACATGGG +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAEAAQP*HTHLHG
Trigger: CCCATGTAAGTGTGTATGCCAGGGCTGAGCTGCCTC...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGTTTGGATCTGTCTaGACCTCAATGTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGRFGSV*TSMCSR
Trigger: CCGAGAGCACATTGAGGTCCAGACAGATCCAAACCT...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGGCAGGCACTGACCTTTaGCCTCCTTCAGCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRREAGTDL*PPSAGR
Trigger: CCGCCCTGCTGAAGGAGGCCAAAGGTCAGTGCCTGC...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR TCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGATCCCGACCGTCGAATaGTGTCTCGATTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRIPTVE*CLDSFQ
Trigger: CTGAAAGGAATCGAGACATCATTCGACGGTCGGGAT...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCCATCAGAGGGGTAGGTaGATTCTCTGTCTTCCTCTA +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGHQRGR*ILCLPL
Trigger: TAGAGGAAGACAGAGAATTCACCTACCCCTCTGATG...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGCACCACGCCCCAGTaGGCTTCCAGCAGCATCTAT +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNSTTPQ*ASSSIY
Trigger: ATAGATGCTGCTGGAAGCTCACTGGGGCGTGGTGCT...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGCAGAGATGCTTCTCGTaGGGCCCGACTGGGCTGCGA +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMQRCFS*GPTGLR
Trigger: TCGCAGCCCAGTCGGGCCTCACGAGAAGCATCTCTG...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATGAAAAACAGGCTGCCTaGCAGCGTGAGATATCACTT +
Preference number: 4 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYEKQAA*QREISL
Trigger: AAGTGATATCTCACGCTGTCAGGCAGCCTGTTTTTC...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCGAAAAACAGGCTGCCTaGCAGCGTGAGATATCACTT +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGEKQAA*QREISL
Trigger: AAGTGATATCTCACGCTGTCAGGCAGCCTGTTTTTC...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTACGTGGCGACGCCTCTaGTTTGCTCTAGTAAATTCC +
Preference number: 4 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACTWRRL*FALVNS
Trigger: GGAATTTACTAGAGCAAATCAGAGGCGTCGCCACGT...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGCAGGGTTGGTGCCGATaGAAGCAAACAGCTGCCCTA +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTQGWCR*KQTAAL
Trigger: TAGGGCAGCTGTTTGCTTTCATCGGCACCAACCCTG...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGCCTCTACCTAAAACCTaGACCTCGGATCCTATCTTG +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLPLPKT*TSDPIL
Trigger: CAAGATAGGATCCGAGGTTCAGGTTTTAGGTAGAGG...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCTCCTGTTGCAGGAAGTaGGGTGTGAATAGAGAGACT +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSSCCRK*GVNRET
Trigger: AGTCTCTCTATTCACACCTCACTTCCTGCAACAGGA...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATTGCCATCACAGGAGCTaGCCCATCTCCTGTTGCAGG +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDCHHRS*PISCCR
Trigger: CCTGCAACAGGAGATGGGTCAGCTCCTGTGATGGCA...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACGCTGCCCGCAGTATGTaGAGTACACCCGGCCCTTGG +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNAARSM*STPGPW
Trigger: CCAAGGGCCGGGTGTACTTCACATACTGCGGGCAGC...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACACGGCATGGTGGCCCATaGGTGCCTGGGTCTGATGCA +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTRHGGP*VPGSDA
Trigger: TGCATCAGACCCAGGCACTCATGGGCCACCATGCCG...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGCTATCATATTGTTGCTaGGCGGTGGCCACGGCAGCA +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTLSYCC*AVATAA
Trigger: TGCTGCCGTGGCCACCGCTCAGCAACAATATGATAG...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACTCTAAGACGACTCCATaGAGCCCAAAGGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDSKTTP*SPKVFS
Trigger: GCTGAAAACCTTTGGGCTTCATGGAGTCGTCTTAGA...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGTGTGGAAGAGGCGAGTaGACAAGTGAGGCAACTTCG +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKCGRGE*TSEATS
Trigger: CGAAGTTGCCTCACTTGTTCACTCGCCTCTTCCACA...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATAACAGGCGGCCTCGATaGGGTTCAGCTGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDNRRPR*GSAGHF
Trigger: GAAATGGCCAGCTGAACCTCATCGAGGCCGCCTGTT...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGGAGACACCCCCAGTTTaGTGTGGACCCTGTCTGTGG +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEETPPV*CGPCLW
Trigger: CCACAGACAGGGTCCACATCAAACTGGGGGTGTCTC...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CAGGGGCAGGTGAACGGGATGCGCTCCTGGTTGCAGGCAAACTTGATGAACTTGGTATCAAAGAGACTCTaGTTTACTACAGACACGGTT +
Preference number: 4 (lower is better)
Translates to: QGQVNGMRSWLQANLMNLVSKRL*FTTDTV
Trigger: AACCGTGTCTGTAGTAAATCAGAGTCTCTTTGATAC...CAAGTTCATCAAGTTTGCCTGCAACCAGGAGCGCATCCCGTTCACCTGCCCCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGTCATGGTCAGGTAGGTaGACCTGCAGCAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTSWSGR*TCSRAC
Trigger: ACAAGCCCTGCTGCAGGTTCACCTACCTGACCATGA...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCCTCAGTCCACTCTTTTaGAAATGGGTGTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSLSPLF*KWVWPF
Trigger: AAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAG...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGACTCAGTCCACTCTTTTaGAAATGGGTGTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGLSPLF*KWVWPF
Trigger: AAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAG...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGAAGCAGACCCCAAATTaGGCAGAGCACCTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKKQTPN*AEHLSP
Trigger: TGGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTT...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGTGGCAAGGCCCAAAGTaGCAGTGTCCAACAAGATGG +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTWQGPK*QCPTRW
Trigger: CCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCA...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTAGTCCATTCAAGGGATaGGGACTAAAGAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLSPFKG*GLKRTK
Trigger: CTTGGTTCTCTTTAGTCCTCATCCCTTGAATGGACT...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCTGCTACATGAAAGGTTaGGGTGGGGTGGCATCTTCC +
Preference number: 4 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFCYMKG*GGVASS
Trigger: GGAAGATGCCACCCCACCTCAACCTTTCATGTAGCA...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR GCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCATCGCACCAACGTGGTaGAATAATTGGTTTATAACC +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTIAPTW*NNWFIT
Trigger: GGTTATAAACCAATTATTGCACCACGTTGGTGCGAT...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTCATATCCCAGTGTGTTaGCTCCATATTCAGCAACCT +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLHIPVC*LHIQQP
Trigger: AGGTTGCTGAATATGGAGGCAACACACTGGGATATG...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACACCATTGGCCTCCACCTaGCACTGGCACCTTTGTAAA +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTPLAST*HWHLCK
Trigger: TTTACAAAGGTGCCAGTGGCAGGTGGAGGCCAATGG...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATGGAGAAGACTGCCGCTaGCAAAAGCCACCCATCCTG +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNGEDCR*QKPPIL
Trigger: CAGGATGGGTGGCTTTTGGCAGCGGCAGTCTTCTCC...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTCAGAAGGAGCTGACATaGTGCGAAGAAAAACAGGCT +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTQKELT*CEEKQA
Trigger: AGCCTGTTTTTCTTCGCAGCATGTCAGCTCCTTCTG...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACACCGCCACCTTGTCTGTaGAGCCAAAAGGAAACTGCT +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTPPPCL*SQKETA
Trigger: AGCAGTTTCCTTTTGGCTGCACAGACAAGGTGGCGG...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATCCGCATGTGCACCAGTaGCTGCTTGCGAGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDPHVHQ*LLASVS
Trigger: GGAAACACTCGCAAGCAGGCACTGGTGCACATGCGG...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGCCGCATGTGCACCAGTaGCTGCTTGCGAGTGTTTCC +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEPHVHQ*LLASVS
Trigger: GGAAACACTCGCAAGCAGGCACTGGTGCACATGCGG...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGCGGGCCAGACCTGAGTaGACAGCCTCTGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMRARPE*TASVEP
Trigger: TGGCTCCACAGAGGCTGTGCACTCAGGTCTGGCCCG...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCCACAGGATCAGTCCTTaGAAGCTCCGAGTTCCTCTC +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSHRISP*KLRVPL
Trigger: GAGAGGAACTCGGAGCTTGCAAGGACTGATCCTGTG...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGCTGTACCTCCACAACTaGAAGTCGCTCTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTLYLHN*KSLSST
Trigger: AGTGCTGGAGAGCGACTTGCAGTTGTGGAGGTACAG...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTGGTGAGATGAGAACATaGAGGCTCGAACAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAGEMRT*RLEQAE
Trigger: TTCCGCCTGTTCGAGCCTGCATGTTCTCATCTCACC...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCCCCATCTCGCTTCTCTaGTTCTGTAGTGAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGPISLL*FCSEAK
Trigger: TTTGGCTTCACTACAGAAGCAGAGAAGCGAGATGGG...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCAACCTTGGTCTCCCATaGTTTCACCAGCAGGGCGTA +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSNLGLP*FHQQGV
Trigger: TACGCCCTGCTGGTGAAAGCATGGGAGACCAAGGTT...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAAGGTACGTTTCTACCTaGACCAGTTCATTCACTGAA +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQRYVST*TSSFTE
Trigger: TTCAGTGAATGAACTGGTGCAGGTAGAAACGTACCT...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTAGTTCTGGGAATGGATaGAATGCTGTAAAGACTGCG +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLSSGNG*NAVKTA
Trigger: CGCAGTCTTTACAGCATTGCATCCATTCCCAGAACT...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTTCACTGTCTGGGAGTTaGCCTGGTAAAAGAGGTCCG +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTASLSGS*PGKRGP
Trigger: CGGACCTCTTTTACCAGGGCAACTCCCAGACAGTGA...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGTGCTCTGGTGCTGTCTaGAGGAAAGAGCAGATCTGT +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRCSGAV*RKEQIC
Trigger: ACAGATCTGCTCTTTCCTGCAGACAGCACCAGAGCA...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGATGAGCAGGGTGAGTaGGCGGTGGAACCACAGCAT +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDDEQGE*AVEPQH
Trigger: ATGCTGTGGTTCCACCGCGCACTCACCCTGCTCATC...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTGTTTGGGAGATGCCCTaGGAGCTGCAGATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIVWEMP*ELQMEA
Trigger: GGCCTCCATCTGCAGCTCGCAGGGCATCTCCCAAAC...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAGCTCCTTCCCGGCCTTaGTGTACTTGCTCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTAPSRP*CTCSCQ
Trigger: TTGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGC...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTGATGTACTGCACAAGTaGCACGTCCATCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCDVLHK*HVHLQG
Trigger: ACCCTGGAGATGGACGTGGCACTTGTGCAGTACATC...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTAGCTGGTTGATGTACTaGACAAGTGCCACGTCCATC +
Preference number: 4 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACSWLMY*TSATSI
Trigger: GATGGACGTGGCACTTGTGCAGTACATCAACCAGCT...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACATGGGGATGGAGCCGTaGGGGTGTGATGGCGAGGTG +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNMGMEP*GCDGEV
Trigger: CACCTCGCCATCACACCCGCACGGCTCCATCCCCAT...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACACAGAAGAACTCGATGTaGTGGTCCGTCTCCATCAGC +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTQKNSM*WSVSIS
Trigger: GCTGATGGAGACGGACCAGCACATCGAGTTCTTCTG...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCAGCCAGCAGAGTGGGTaGCTCAGTGACAGCCTAATT +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSSQQSG*LSDSLI
Trigger: AATTAGGCTGTCACTGAGGCACCCACTCTGCTGGCT...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACCACATCGCACCAACGTaGTGCAATAATTGGTTTATA +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDHIAPT*CNNWFI
Trigger: TATAAACCAATTATTGCACCACGTTGGTGCGATGTG...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAGCAAATTTGATCTTTTaGAGCCATCAACAACTGCCA +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLANLIF*SHQQLP
Trigger: TGGCAGTTGTTGATGGCTCCAAAAGATCAAATTTGC...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACGGGAGATCACGCCATTaGCCTCCACCTGCCACTGGC +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNGRSRH*PPPATG
Trigger: GCCAGTGGCAGGTGGAGGCCAATGGCGTGATCTCCC...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACACGTCGTGCAGGAAGATaGTCTCTTCCTTCACCGAGA +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTRRAGR*SLPSPR
Trigger: TCTCGGTGAAGGAAGAGACCATCTTCCTGCACGACG...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGAAGGCCAGCTGGCGCTaGGCATTCCACAGTCCTCGC +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMKASWR*AFHSPR
Trigger: GCGAGGACTGTGGAATGCCCAGCGCCAGCTGGCCTT...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGATCTTTTGGAGCCATCAACAACTGCCAAAGAAGCAATCCCGACCGTCGAATTCTTCTAAGGCCAGCTaGCGCTGGGCATTCCACAGT +
Preference number: 4 (lower is better)
Translates to: LIFWSHQQLPKKQSRPSNSSKAS*RWAFHS
Trigger: ACTGTGGAATGCCCAGCGCCAGCTGGCCTTAGAAGA...ATTCGACGGTCGGGATTGCTTCTTTGGCAGTTGTTGATGGCTCCAAAAGATCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550724.2
CDS-3UTR CCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGTGCTGCAACAAGCCCTaGCGTTTGAGCAGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTCCNKP*RLSRAK
Trigger: TTTGGCCCTGCTCAAACGCCAGGGCTTGTTGCAGCA...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAGTCAAGCTCAAAGGCTaGCAGTCACGAAGGCAGTTC +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTVKLKG*QSRRQF
Trigger: GAACTGCCTTCGTGACTGCCAGCCTTTGAGCTTGAC...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCTTTTCAATGATCCCCTaGCACAAGCCAAAGCCACCA +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSFSMIP*HKPKPP
Trigger: TGGTGGCTTTGGCTTGTGCCAGGGGATCATTGAAAA...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATATTTTCTCATTCAGGCTaGCAGGAGACCAGATCCAAT +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIFSHSG*QETRSN
Trigger: ATTGGATCTGGTCTCCTGCCAGCCTGAATGAGAAAA...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGTCAGTGTGTTGGAGATaGTGGAACCAGTCAGGGCAG +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTSVCWR*WNQSGQ
Trigger: CTGCCCTGACTGGTTCCACCATCTCCAACACACTGA...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCCCTCTTTCAGTGTGTTaGAGATGGTGGAACCAGTCA +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSPLSVC*RWWNQS
Trigger: TGACTGGTTCCACCATCTCCAACACACTGAAAGAGG...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCACACGCTCCCAATCCTaGTACGAGAGCACCACGCCC +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSTRSQS*YESTTP
Trigger: GGGCGTGGTGCTCTCGTACCAGGATTGGGAGCGTGT...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTAAAGGAAACTGCTGCTaGACACAGCTTGGTCAGGGT +
Preference number: 4 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACKGNCC*TQLGQG
Trigger: ACCCTGACCAAGCTGTGTCCAGCAGCAGTTTCCTTT...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAAAGGACCATCGTCACTaGACCCACAAGATGCGTCAC +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTKDHRH*THKMRH
Trigger: GTGACGCATCTTGTGGGTCCAGTGACGATGGTCCTT...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTGACACACAAGCTGGCTaGCTCAGGATGGCTTTACCT +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCDTQAG*LRMALP
Trigger: AGGTAAAGCCATCCTGAGCCAGCCAGCTTGTGTGTC...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCGCAGGGAGGCGATCTTaGAAGCTGGGTCGCTGGGAT +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSAGRRS*KLGRWD
Trigger: ATCCCAGCGACCCAGCTTCCAAGATCGCCTCCCTGC...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCACTTCATGGGATGACTaGTCTTCCCGCTTGTGGATA +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSTSWDD*SSRLWI
Trigger: TATCCACAAGCGGGAAGACCAGTCATCCCATGAAGT...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCAACTTCATGGGATGACTaGTCTTCCCGCTTGTGGATA +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSTSWDD*SSRLWI
Trigger: TATCCACAAGCGGGAAGACCAGTCATCCCATGAAGT...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGGCTGGAGGACTTCATaGGATGACTGGTCTTCCCGC +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDGWRTS*DDWSSR
Trigger: GCGGGAAGACCAGTCATCCCATGAAGTCCTCCAGCC...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGCTGAATGTGAACCACTaGCCACATGCCACCAGAGAC +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTLNVNH*PHATRD
Trigger: GTCTCTGGTGGCATGTGGCCAGTGGTTCACATTCAG...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCGGTCTGATGCAATACTaGTGCCAGCATCATTGTCAC +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGGLMQY*CQHHCH
Trigger: GTGACAATGATGCTGGCACCAGTATTGCATCAGACC...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGGGTCTGATGCAATACTaGTGCCAGCATCATTGTCAC +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLGLMQY*CQHHCH
Trigger: GTGACAATGATGCTGGCACCAGTATTGCATCAGACC...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAGGCAGCAATCCGGCATaGTGGCCCATGAGTGCCTGG +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTGSNPA*WPMSAW
Trigger: CCAGGCACTCATGGGCCACCATGCCGGATTGCTGCC...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCTCGGATGGCAAATTTTaGCAGAGCAGTTCCAACAGC +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGSDGKF*QSSSNS
Trigger: GCTGTTGGAACTGCTCTGCCAAAATTTGCCATCCGA...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGATGCTCTTGTCAAACTTaGGCTTTGGCACGCCATACT +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGCSCQT*ALARHT
Trigger: AGTATGGCGTGCCAAAGCCCAAGTTTGACAAGAGCA...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGTACACCTCATGGGGATaGAGCCGTGCGGGTGTGATG +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEYTSWG*SRAGVM
Trigger: CATCACACCCGCACGGCTCCATCCCCATGAGGTGTA...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGTCCAGGTACACCTCATaGGGATGGAGCCGTGCGGGT +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRRESRYTS*GWSRAG
Trigger: ACCCGCACGGCTCCATCCCCATGAGGTGTACCTGGA...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGAAGATCAGCCCTTTaGCCTCCTTCAGCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNRRSAL*PPSAGR
Trigger: CCGCCCTGCTGAAGGAGGCCAAAGGGCTGATCTTCT...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTCTGAGGCCAGCTGCCTaGCAGCCTGACAGAAGTAGG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRILRPAA*QPDRSR
Trigger: CCTACTTCTGTCAGGCTGCCAGGCAGCTGGCCTCAG...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGTGCAGCAGGGCTTGTTaGGGCTGTCAGGGCTCTCCG +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMCSRAC*GCQGSP
Trigger: CGGAGAGCCCTGACAGCCCCAACAAGCCCTGCTGCA...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGAACGGGATGCGCTCCTaGTTGCAGGCAAACTTGATG +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKNGMRS*LQANLM
Trigger: CATCAAGTTTGCCTGCAACCAGGAGCGCATCCCGTT...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCGGACAAAGACCTATTTaGGGCAAAGATGCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSGQRPI*GKDAVG
Trigger: ACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCC...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGGCTGCCCGTGGATTCTaGCCCTGGTGTCTTGCAGGT +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRREAARGF*PWCLAG
Trigger: ACCTGCAAGACACCAGGGCCAGAATCCACGGGCAGC...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGCAAGGACGCTGCCCGTaGATTCTGGCCCTGGTGTCT +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRREQGRCP*ILALVS
Trigger: AGACACCAGGGCCAGAATCCACGGGCAGCGTCCTTG...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGAAGGTTGAGGTGGGGTaGCATCTTCCTGGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRREKVEVG*HLPGGA
Trigger: AGCCCCGCCAGGAAGATGCCACCCCACCTCAACCTT...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCCCTTGGGAAGTGACTTaGCTTTGTAGAGTCCCAGTT +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSPWEVT*LCRVPV
Trigger: AACTGGGACTCTACAAAGCCAAGTCACTTCCCAAGG...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR TCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGGGCTCAGTGATAATGTaGCTGACTCCAAGTCTCTGG +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTGSVIM*LTPSLW
Trigger: CCAGAGACTTGGAGTCAGTCACATTATCACTGAGCC...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACTGCAGCAGGCACAGTTaGAAGGAGCTTTTGAAAATC +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDCSRHS*KELLKI
Trigger: GATTTTCAAAAGCTCCTTTCAACTGTGCCTGCTGCA...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGAATCTTTAAACCAGTaGGAAATCCTGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTESLNQ*EILALP
Trigger: AGGAAGAGCCAGGATTTCTCACTGGTTTAAAGATTC...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGGTTCTACTCTGGGACTaGATAAGGGGGAAGACCAGC +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTVLLWD*IRGKTS
Trigger: GCTGGTCTTCCCCCTTATTCAGTCCCAGAGTAGAAC...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATAAGTTTCAATTCCATTaGGACAGTCAGCAGGCTCCT +
Preference number: 4 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYKFQFH*DSQQAP
Trigger: AGGAGCCTGCTGACTGTCTCAATGGAATTGAAACTT...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTGTTCAAAAATGTCCATaGAGACAGAATGTCCCTTCG +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLVQKCP*RQNVPS
Trigger: CGAAGGGACATTCTGTCTTCATGGACATTTTTGAAC...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTACCTATGTGGCTCCTTaGGAGATCATTGAGAAGACT +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTTYVAP*EIIEKT
Trigger: AGTCTTCTCAATGATCTCTCAAGGAGCCACATAGGT...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGAGAGACTTCCCTCCTaGGGAAGCAACATGGACTGG +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDERLPS*GSNMDW
Trigger: CCAGTCCATGTTGCTTCCTCAGGAGGGAAGTCTCTC...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATCTAAAAGCTGGGCCATaGCCAGGCATGCTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNLKAGP*PGMLLS
Trigger: GGACAAGAGCATGCCTGGTCATGGCCCAGCTTTTAG...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATTGGTATTGTCCAGTGTaGCCAGCCCATTGGTGGCAG +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDWYCPV*PAHWWQ
Trigger: CTGCCACCAATGGGCTGGTCACACTGGACAATACCA...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTAACAGGCGGCCTCGATaGGGTTCAGCTGGCCATTTC +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRINRRPR*GSAGHF
Trigger: GAAATGGCCAGCTGAACCTCATCGAGGCCGCCTGTT...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATCCCTTCACTGTCCTCTaGTTTCCAGGACAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDPFTVL*FPGQQL
Trigger: CAGCTGCTGTCCTGGAAATCAGAGGACAGTGAAGGG...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCCCTTCCATGAGTGCATaGAAATACGTAGAGAACCTG +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSPSMSA*KYVENL
Trigger: CAGGTTCTCTACGTATTTTCATGCACTCATGGAAGG...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAAAATGTCAGAGACTCTaGTGGGCTTCGCTGGTGTCA +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTKCQRL*WASLVS
Trigger: TGACACCAGCGAAGCCCATCAGAGTCTCTGACATTT...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAGCGGCCGGACATTGGTaGAGAAGAGGTGGAGGAGGT +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTAAGHW*RRGGGG
Trigger: ACCTCCTCCACCTCTTCTTCACCAATGTCCGGCCGC...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCTCTCCAGTGTGGTGTTaGGGGACTGCAGCAAGGCGA +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSSPVWC*GTAARR
Trigger: TCGCCTTGCTGCAGTCCCTCAACACCACACTGGAGA...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGTTCTTATTGACAGCTaGGCTGGGGCACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIVLIDS*AGAQQQ
Trigger: CTGCTGCTGTGCCCCAGCTCAGCTGTCAATAAGAAC...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATTCATGGTCAGGTAGGTaGACCTGCAGCAGGGCTTGT +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDSWSGR*TCSRAC
Trigger: ACAAGCCCTGCTGCAGGTTCACCTACCTGACCATGA...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAGAACTAAGGTCGGGATaGACCCTTAAGTCTCCTGCT +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTELRSG*TLKSPA
Trigger: AGCAGGAGACTTAAGGGTTCATCCCGACCTTAGTTC...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTAGTCCATTCAAGGGATaGGGACTAAAGAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTSPFKG*GLKRTK
Trigger: CTTGGTTCTCTTTAGTCCTCATCCCTTGAATGGACT...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGGCCAACAGAAGCTTCTaGACTCCTCCTGGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEANRSF*TPPGEV
Trigger: TACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGC...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCATGTGCTTCAATTGGATaGTGCTTGCCCAAGACACTT +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSCASIG*CLPKTL
Trigger: AAGTGTCTTGGGCAAGCAGCATCCAATTGAAGCACA...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAACTGCTAAGATGATGTaGTTCAATTGGATGCTGCTT +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQTAKMM*FNWMLL
Trigger: AAGCAGCATCCAATTGAAGCACATCATCTTAGCAGT...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAGGAGCCATCAACAACTaGCAAAGAAGCAATCCCGAC +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTGAINN*QRSNPD
Trigger: GTCGGGATTGCTTCTTTGGCAGTTGTTGATGGCTCC...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TTTTGGAGCCATCAACAACTGCCAAAGAAGCAATCCCGACCGTCGAATGATGTCGGAGCCATCAACAACTaGCAAAGAAGCAATCCCGAC +
Preference number: 4 (lower is better)
Translates to: FWSHQQLPKKQSRPSNDVGAINN*QRSNPD
Trigger: GTCGGGATTGCTTCTTTGGCAGTTGTTGATGGCTCC...GACATCATTCGACGGTCGGGATTGCTTCTTTGGCAGTTGTTGATGGCTCCAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550724.2
CDS-3UTR GCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTAAGGTGATTCTGAACTaGCATCAGATAGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACKVILN*HQIAQA
Trigger: TGCCTGCGCTATCTGATGGCAGTTCAGAATCACCTT...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACAAGCCTTTTAACCTCTaGTCACGGTCTGCTATGTCA +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDKPFNL*SRSAMS
Trigger: TGACATAGCAGACCGTGAGCAGAGGTTAAAAGGCTT...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTCGGATCAGCCCGTCGTaGAGGAAGATGGTCTCTTCC +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIRISPS*RKMVSS
Trigger: GGAAGAGACCATCTTCCTGCACGACGGGCTGATCCG...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTAGTTCTGCAACACTCTaGAGCTGTCTCTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCSSATL*SCLSMA
Trigger: TGCCATGGAGAGACAGCTGCAGAGTGTTGCAGAACT...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGCTGCGATGGTGACATaGAGCAACAGCTCGGCTCGG +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMAAMVT*SNSSAR
Trigger: CCGAGCCGAGCTGTTGCTGCATGTCACCATCGCAGC...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGAAGGCTTCCTGGACCTaGTCGACCATCCCACCACAT +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEKASWT*STIPPH
Trigger: ATGTGGTGGGATGGTCGAGCAGGTCCAGGAAGCCTT...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGTTTCCGCAGGGCGGCTaGAGCCTCTTCTGTAATCAC +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEFPQGG*SLFCNH
Trigger: GTGATTACAGAAGAGGCTGCAGCCGCCCTGCGGAAA...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTTGGAATGTACATCAGTaGTCTAGACAGAACCTTCTC +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLWNVHQ*SRQNLL
Trigger: GAGAAGGTTCTGTCTAGAGCACTGATGTACATTCCA...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGGCAACGGCCTGGCGTaGAATTCTCTGAAGTTTGGC +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDGNGLA*NSLKFG
Trigger: GCCAAACTTCAGAGAATTGCACGCCAGGCCGTTGCC...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGTTTGAAGCCTCCAAGTaGACACAGTGCGGCAACGGC +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEFEASK*TQCGNG
Trigger: GCCGTTGCCGCACTGTGTGCACTTGGAGGCTTCAAA...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGCCCATCTCGCTTCTCTaGTTCTGTAGTGAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRPISLL*FCSEAK
Trigger: TTTGGCTTCACTACAGAAGCAGAGAAGCGAGATGGG...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGTATGGTGAGAGGCGCTaGCCGCAGTATGTGAAGTAC +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTYGERR*PQYVKY
Trigger: GTACTTCACATACTGCGGGCAGCGCCTCTCACCATA...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCCTGATGCAATACTGGTaGCAGCATCATTGTCACTGT +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSLMQYW*QHHCHC
Trigger: ACAGTGACAATGATGCTGGCACCAGTATTGCATCAG...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCAAAGGTCTCTTGGGATaGCACCATTCTCTTCGTAGA +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGKGLLG*HHSLRR
Trigger: TCTACGAAGAGAATGGTGGCATCCCAAGAGACCTTT...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTTGGGAATGGATGCAATaGTGTAAAGACTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCWEWMQ*CKDCAR
Trigger: CCTGGCGCAGTCTTTACAGCATTGCATCCATTCCCA...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGCACCCGTGCCCACGGTaGCTTGTACAGAGAGGAGTC +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMHPCPR*LVQRGV
Trigger: GACTCCTCTCTGTACAAGGCACCGTGGGCACGGGTG...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGGGAAGACTGGCGCTTaGCCGACGAGGAGGCCTTTT +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMGKTGA*PTRRPF
Trigger: AAAAGGCCTCCTCGTCGGGCAAGCGCCAGTCTTCCC...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGTCAGGCTCAGCGTCTaGTCTGAATGGGCACAACTC +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIVRLSV*SEWAQL
Trigger: GAGTTGTGCCCATTCAGAGCAGACGCTGAGCCTGAC...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGGCTCCTTCCCGGCCTTaGTGTACTTGCTCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTAPSRP*CTCSCQ
Trigger: TTGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGC...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GTGAATGGCACAACGAAGTTTCTCCAGCATGATTTCCAGAGAGGAGTACTGGGGACGCTACGGATATCTTaGCTGGCTCGGTCAATAACA +
Preference number: 4 (lower is better)
Translates to: VNGTTKFLQHDFQRGVLGTLRIS*LARSIT
Trigger: TGTTATTGACCGAGCCAGGCAAGATATCCGTAGCGT...CCCCAGTACTCCTCTCTGGAAATCATGCTGGAGAAACTTCGTTGTGCCATTCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR GCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGTCGGACATCGATGCATaGGCACCTCTCAAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKSDIDA*APLKVK
Trigger: CTTCACTTTGAGAGGTGCGCATGCATCGATGTCCGA...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCTCGGACATCGATGCATaGGCACCTCTCAAAGTGAAG +
Preference number: 4 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFSDIDA*APLKVK
Trigger: CTTCACTTTGAGAGGTGCGCATGCATCGATGTCCGA...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR GCA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCAGCTGGTTGATGTACTaGACAAGTGCCACGTCCATC +
Preference number: 4 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFSWLMY*TSATSI
Trigger: GATGGACGTGGCACTTGTGCAGTACATCAACCAGCT...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR GCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGTGGTGTTGAGGGACTaGAGCAAGGCGAAGCGCAGG +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMVVLRD*SKAKRR
Trigger: CCTGCGCTTCGCCTTGCTGCAGTCCCTCAACACCAC...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGTCAGCAGGGCGGCGATaGTGTGGGTATACATGGGTG +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRRESAGRR*CGYTWV
Trigger: CACCCATGTATACCCACAGCATCGCCGCCCTGCTGA...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR GCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATGACAGCGAGGAACTCTaGAGCTCCTTACACACCTGC +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNDSEEL*SSLHTC
Trigger: GCAGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTC...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAAGCATGGTCAGCAGCTaGAGGGGGATGATGGAGCCC +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTSMVSS*RGMMEP
Trigger: GGGCTCCATCATCCCCCTGCAGCTGCTGACCATGCT...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGTCTGGACCTCAATGTaGTCTCGGAGAAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDVWTSM*SRRSSH
Trigger: GTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGGCCAGGTGGCTGAGATaGCTGACTCACAGGCAACAC +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRREARWLR*LTHRQH
Trigger: GTGTTGCCTGTGAGTCAGGCATCTCAGCCACCTGGC...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTGCAAGAAGATTGAGTTaGTGTATGCACATCGCACCA +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTARRLS*CMHIAP
Trigger: TGGTGCGATGTGCATACACCAACTCAATCTTCTTGC...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATTATGGTCAGAGGCAGTaGAGAGGGGCTCGGAGTAAG +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNYGQRQ*RGARSK
Trigger: CTTACTCCGAGCCCCTCTCCACTGCCTCTGACCATA...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATTCTTCTAAGGCCAGCTaGCGCTGGGCATTCCACAGT +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNSSKAS*RWAFHS
Trigger: ACTGTGGAATGCCCAGCGCCAGCTGGCCTTAGAAGA...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTTTCTTTTTGCTTATGTaGGATGTGTCGGCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFFFLLM*DVSACV
Trigger: GACACAGGCCGACACATCCCACATAAGCAAAAAGAA...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCTTCTTTTTGCTTATGTaGGATGTGTCGGCCTGTGTC +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSFFLLM*DVSACV
Trigger: GACACAGGCCGACACATCCCACATAAGCAAAAAGAA...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCATGTACGTTCCTGAAGTaGGTTGGCTACAAATACACC +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSCTFLK*VGYKYT
Trigger: GGTGTATTTGTAGCCAACCCACTTCAGGAACGTACA...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTACACAACAGAGGTCATaGTCTCGCCAAAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTATQQRS*SRQRLP
Trigger: AGGAAGCCTTTGGCGAGACCATGACCTCTGTTGTGT...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATACTCAACACAGCGGTTaGCAAGCACCTGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDTQHSG*QAPGRQ
Trigger: CTGCCTTCCAGGTGCTTGCCAACCGCTGTGTTGAGT...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGAACTGTCTGACATCCTaGAACCACATAATCTGCCAG +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLNCLTS*NHIICQ
Trigger: CTGGCAGATTATGTGGTTCCAGGATGTCAGACAGTT...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGTCCACTCACAGTCTCTaGGTTGATAGACTCTACAGG +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLSTHSL*VDRLYR
Trigger: CCTGTAGAGTCTATCAACCCAGAGACTGTGAGTGGA...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCTTTTTGTCGCCTGTaGATAGTCCACTCACAGTCT +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLSFCRL*IVHSQS
Trigger: AGACTGTGAGTGGACTATCCACAGGCGACAAAAAGA...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACTCCTCTCTCGGCAAATaGAAGTTTGGGCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDSSLGK*KFGQFS
Trigger: AGAAAACTGCCCAAACTTCCATTTGCCGAGAGAGGA...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCCAATTCTCTGAAGTTTaGCAAGTTTCCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGQFSEV*QVSCHC
Trigger: GCAGTGGCAGGAAACTTGCCAAACTTCAGAGAATTG...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCCTGAGGAAGCAACATaGACTGGACTGCCTGTACTA +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAPEEAT*TGLPVL
Trigger: TAGTACAGGCAGTCCAGTCCATGTTGCTTCCTCAGG...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTAAGACAAGTGCCCACTaGATTAGTCCAAGCCCCATC +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAKTSAH*ISPSPI
Trigger: GATGGGGCTTGGACTAATCCAGTGGGCACTTGTCTT...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAGCTCGGCCGTTGTTATaGAAAAGACAAGTGCCCACT +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTARPLL*KRQVPT
Trigger: AGTGGGCACTTGTCTTTTCCATAACAACGGCCGAGC...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATATACATTATTGCTGTCTaGAGAGCGGGTTACTACTGT +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIYIIAV*RAGYYC
Trigger: ACAGTAGTAACCCGCTCTCCAGACAGCAATAATGTA...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGTCAGCATCCCTCGGATaGCAAATTTTGGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKSASLG*QILAEQ
Trigger: CTGCTCTGCCAAAATTTGCCATCCGAGGGATGCTGA...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTTTTGGATTCGGAAATTaGGAACTCTTCGGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTFGFGN*ELFGGE
Trigger: TTCCCCTCCGAAGAGTTCCCAATTTCCGAATCCAAA...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTTTTCGCTTCACTTTGTaGCCGAGGCCATATACGAGC +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAFRFTL*PRPYTS
Trigger: GCTCGTATATGGCCTCGGCCACAAAGTGAAGCGAAA...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCTGTGGACCCTGTCTGTaGAGAGGACCACAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSCGPCL*RGPQRG
Trigger: ACCCCTCTGTGGTCCTCTCCACAGACAGGGTCCACA...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATACCCCCAGTTTGATGTaGACCCTGTCTGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDTPSLM*TLSVER
Trigger: CCTCTCCACAGACAGGGTCCACATCAAACTGGGGGT...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGAGGTGGCGGCATAGCTaGTTGATGTACTGCACAAGT +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTRWRHS*LMYCTS
Trigger: ACTTGTGCAGTACATCAACCAGCTATGCCGCCACCT...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAAGGTGGCGGCATAGCTaGTTGATGTACTGCACAAGT +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTRWRHS*LMYCTS
Trigger: ACTTGTGCAGTACATCAACCAGCTATGCCGCCACCT...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGGGTGTGATGGCGAGGTaGCGGCATAGCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRREGVMAR*RHSWLM
Trigger: CATCAACCAGCTATGCCGCCACCTCGCCATCACACC...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGTACACCTCATGGGGATaGAGCCGTGCGGGTGTGATG +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRREYTSWG*SRAGVM
Trigger: CATCACACCCGCACGGCTCCATCCCCATGAGGTGTA...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAGGGCGGCGATGCTGTaGGTATACATGGGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSRAAML*VYMGVW
Trigger: CCAGACACCCATGTATACCCACAGCATCGCCGCCCT...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGAGGGCGGCGATGCTGTaGGTATACATGGGTGTCTGG +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRRERAAML*VYMGVW
Trigger: CCAGACACCCATGTATACCCACAGCATCGCCGCCCT...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTAGAAGATCAGCCCTTTaGCCTCCTTCAGCAGGGCGG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIRRSAL*PPSAGR
Trigger: CCGCCCTGCTGAAGGAGGCCAAAGGGCTGATCTTCT...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGTCCCACAATTTCCAGTaGGTCCAAGGTGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKSHNFQ*VQGDLR
Trigger: CCTGAGATCACCTTGGACCCACTGGAAATTGTGGGA...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATTCCATCAGCCCCACTTaGTACATGGTGTGGGCCTTG +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNSISPT*YMVWAL
Trigger: CAAGGCCCACACCATGTACCAAGTGGGGCTGATGGA...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGCTTCACGGTAGTGAATaGCACAACGAAGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLLHGSE*HNEVSP
Trigger: TGGAGAAACTTCGTTGTGCCATTCACTACCGTGAAG...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCCTTCACGGTAGTGAATaGCACAACGAAGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGLHGSE*HNEVSP
Trigger: TGGAGAAACTTCGTTGTGCCATTCACTACCGTGAAG...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGCAGATAGGGAGGTATaGGAGGGGCAGGGGAACCAC +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMADREV*EGQGNH
Trigger: GTGGTTCCCCTGCCCCTCCCATACCTCCCTATCTGC...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTGTTACAGGGAGGAGATaGATGCTAACGGCTCTATCT +
Preference number: 4 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACVTGRR*MLTALS
Trigger: AGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAAC...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCATTTAGGGCCAAGGTTTaGATCTGTCTGGACCTCAAT +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSFRAKV*ICLDLN
Trigger: ATTGAGGTCCAGACAGATCCAAACCTTGGCCCTAAA...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTTTAGGGCCAAGGTTTaGATCTGTCTGGACCTCAAT +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLFRAKV*ICLDLN
Trigger: ATTGAGGTCCAGACAGATCCAAACCTTGGCCCTAAA...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGGAGATCTCGGCCAGGTaGCTGAGATGCCTGACTCAC +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRREEISAR*LRCLTH
Trigger: GTGAGTCAGGCATCTCAGCCACCTGGCCGAGATCTC...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR TCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGTGGTGGCAAGAAGATTaGGTTGGTGTATGCACATCG +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTWWQED*VGVCTS
Trigger: CGATGTGCATACACCAACTCAATCTTCTTGCCACCA...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGTGCCCAAGACACTTGTaGTTGGAAGATTGGGGTTGG +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTCPRHL*LEDWGW
Trigger: CCAACCCCAATCTTCCAATCACAAGTGTCTTGGGCA...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTTGATCTTTTGGAGCCATCAACAACTGCCAAAGAAGCAATCCCGACCGTCGAAATCCCGACCGTCGAATaGTGTCTCGATTCCTTTCAG +
Preference number: 4 (lower is better)
Translates to: FDLLEPSTTAKEAIPTVEIPTVE*CLDSFQ
Trigger: CTGAAAGGAATCGAGACATCATTCGACGGTCGGGAT...TTCGACGGTCGGGATTGCTTCTTTGGCAGTTGTTGATGGCTCCAAAAGATCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550724.2
CDS-3UTR TCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATAATTTCAGGGCAAATTTaGTCTTTTGGAGCCATCAAC +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIISGQI*SFGAIN
Trigger: GTTGATGGCTCCAAAAGATCAAATTTGCCCTGAAAT...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCCAGTTTGGCACTTGGTaGTTAAGATACAGGATTCTC +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSQFGTW*LRYRIL
Trigger: GAGAATCCTGTATCTTAATCACCAAGTGCCAAACTG...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAACACTGGAAGAAGGTaGCCAAGCATAGTAGCCTTA +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRNTGRR*PSIVAL
Trigger: TAAGGCTACTATGCTTGGTCACCTTCTTCCAGTGTT...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGGGTGTTCTGGTCAATaGCCTGGAAAAGGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIGCSGQ*PGKGSE
Trigger: CTCACTCCCTTTTCCAGGTCATTGACCAGAACACCC...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTAGAATTGTACGTTCCTaGAGTGGGTTGGCTACAAAT +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTRIVRS*SGLATN
Trigger: ATTTGTAGCCAACCCACTTCAGGAACGTACAATTCT...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTGCACGACTTGTAAACTaGCCATCCGAAATATTATAC +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLARLVN*PSEILY
Trigger: GTATAATATTTCGGATGGTCAGTTTACAAGTCGTGC...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGGGGTGTGAGGGTTTCTaGATAAGAGAATTCACTTCT +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLGCEGF*IREFTS
Trigger: AGAAGTGAATTCTCTTATTCAGAAACCCTCACACCC...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGTTTAGCCAGTGGGTGTaGGGGTTTCTGAATAAGAGA +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRFSQWV*GFLNKR
Trigger: TCTCTTATTCAGAAACCCTCACACCCACTGGCTAAA...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTTACACAGTCGATCCATaGGCTGCACAAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIYTVDP*AAQGHC
Trigger: GCAGTGGCCTTGTGCAGCTCATGGATCGACTGTGTA...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCTACACAGTCGATCCATaGGCTGCACAAGGCCACTGC +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSYTVDP*AAQGHC
Trigger: GCAGTGGCCTTGTGCAGCTCATGGATCGACTGTGTA...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAGTTGTGGTCCATATTTaGGCAGCATTTGATTCAGGT +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGVVVHI*AAFDSG
Trigger: ACCTGAATCAAATGCTGCTCAAATATGGACCACAAC...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGTTGTGGTCCATATTTaGGCAGCATTTGATTCAGGT +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDVVVHI*AAFDSG
Trigger: ACCTGAATCAAATGCTGCTCAAATATGGACCACAAC...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGTCTAAGACGACTCCATaGAGCCCAAAGGTTTTCAGC +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTSKTTP*SPKVFS
Trigger: GCTGAAAACCTTTGGGCTTCATGGAGTCGTCTTAGA...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACAGGCGAGTGAACAAGTaGGGCAACTTCGGGGCGAAG +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNRRVNK*GNFGAK
Trigger: CTTCGCCCCGAAGTTGCCTCACTTGTTCACTCGCCT...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGTGTGGAAGAGGCGAGTaGACAAGTGAGGCAACTTCG +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREECGRGE*TSEATS
Trigger: CGAAGTTGCCTCACTTGTTCACTCGCCTCTTCCACA...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGTGTAGATCTCGTCTTTaGAGACCCCGCCGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMCRSRL*RPRRGR
Trigger: ACGCCCACGGCGGGGTCTTCAAAGACGAGATCTACA...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACATCCTCAGGATCTGGGTaGGCTGATCCTCCAGCACCT +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTSSGSG*ADPPAP
Trigger: AGGTGCTGGAGGATCAGCTCACCCAGATCCTGAGGA...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGCAGGGTCCACTTTCTTaGGGCCTTCTGTGCATGTCG +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRREQGPLS*GLLCMS
Trigger: CGACATGCACAGAAGGCCTCAAGAAAGTGGACCCTG...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR TCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGAGTTTTCAGAAGCTCTaGTTTCCCCTCCCACAATTT +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLSFQKL*FPLPQF
Trigger: AAATTGTGGGAGGGGAAATCAGAGCTTCTGAAAACT...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGCTCAGTCCACTCTTTTaGAAATGGGTGTGGCCCTTT +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTLSPLF*KWVWPF
Trigger: AAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAG...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGGCCTGTGCTGCTCATaGACAAAGTACCACTGGACA +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIGLCCS*TKYHWT
Trigger: TGTCCAGTGGTACTTTGTTCATGAGCAGCACAGGCC...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGAGCGATGTGATTCTGTaGGACCTGGCAAGGCCCAAA +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREESDVIL*DLARPK
Trigger: TTTGGGCCTTGCCAGGTCTCACAGAATCACATCGCT...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCATAAATACAGCGATGTaGTTCTGTGAGACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSINTAM*FCETWQ
Trigger: TTGCCAGGTCTCACAGAATCACATCGCTGTATTTAT...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCAAGGTGATTCTGAACTaGCATCAGATAGCGCAGGCA +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSKVILN*HQIAQA
Trigger: TGCCTGCGCTATCTGATGGCAGTTCAGAATCACCTT...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACATTCAATGTCTCTCCCTaGAAGGAGCTGTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTFNVSP*KELSLS
Trigger: TGACAGTGACAGCTCCTTGCAGGGAGAGACATTGAA...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATCCATTGGCCTCCACCTaGCACTGGCACCTTTGTAAA +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDPLAST*HWHLCK
Trigger: TTTACAAAGGTGCCAGTGGCAGGTGGAGGCCAATGG...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGCATCTATGAGATCTaGACGACTTGTAAACTGACC +
Preference number: 4 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGSIYEI*TTCKLT
Trigger: GGTCAGTTTACAAGTCGTGCAGATCTCATAGATGCT...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCTCAACCAAGTTCAAGTaGTTAATAACACAAGATACC +
Preference number: 4 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTSTKFK*LITQDT
Trigger: GGTATCTTGTGTTATTAAGCACTTGAACTTGGTTGA...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTTTTTTGTTCCAGTTCTaGAACACTCTGCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTFLFQF*NTLQLS
Trigger: AGACAGCTGCAGAGTGTTGCAGAACTGGAACAAAAA...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCAGAAGGAGCTGACATaGTGCGAAGAAAAACAGGCT +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCQKELT*CEEKQA
Trigger: AGCCTGTTTTTCTTCGCAGCATGTCAGCTCCTTCTG...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGTCAATGGCCAGCGACTaGAGGAGTGTAAAGGAGCTG +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREESMASD*RSVKEL
Trigger: CAGCTCCTTTACACTCCTGCAGTCGCTGGCCATTGA...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAATGTGCACCAGTGCCTaGTTGCGAGTGTTTCCCCGC +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTMCTSA*LRVFPR
Trigger: GCGGGGAAACACTCGCAAGCAGGCACTGGTGCACAT...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACACTGGACCCACAAGATaGGTCACTCCCCCGACTCGT +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNTGPTR*VTPPTR
Trigger: ACGAGTCGGGGGAGTGACGCATCTTGTGGGTCCAGT...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGGTTTCCTGCCACTGCTaGTGCCATTTTCCAGAATGC +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTVSCHC*CHFPEC
Trigger: GCATTCTGGAAAATGGCAGCAGCAGTGGCAGGAAAC...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATGGTGAGATGAGAACATaGAGGCTCGAACAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNGEMRT*RLEQAE
Trigger: TTCCGCCTGTTCGAGCCTGCATGTTCTCATCTCACC...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATTGTCACTGTCAGATaGCATGGCGAAAGGCAGGGC +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEIVTVR*HGERQG
Trigger: GCCCTGCCTTTCGCCATGGCATCTGACAGTGACAAT...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAAACCTTGGTCTCCCATaGTTTCACCAGCAGGGCGTA +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPINLGLP*FHQQGV
Trigger: TACGCCCTGCTGGTGAAAGCATGGGAGACCAAGGTT...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTTCCGCTCTGCTTCATTaGGGAAGCGTCTTCGGATGG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRISALLH*GSVFGW
Trigger: CCATCCGAAGACGCTTCCGCAATGAAGCAGAGCGGA...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATCCAGCACACCTTCACTaGGGAGGTACGTTTCTACCT +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNPAHLH*GGTFLP
Trigger: AGGTAGAAACGTACCTCCGCAGTGAAGGTGTGCTGG...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGTTCCAGGACAGCAGCTaGTCTGCGAAGGCCATAGCC +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMFQDSS*SAKAIA
Trigger: GGCTATGGCCTTCGCAGAGCAGCTGCTGTCCTGGAA...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATCTTATCTCCACGACTaGGAAGCCTTTGATGGGGCG +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPISYLHD*EAFDGA
Trigger: CGCCCCATCAAAGGCTTCGCAGTCGTGGAGATAAGA...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAACGCTACGGATATCTTaGCTGGCTCGGTCAATAACA +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTTLRIS*LARSIT
Trigger: TGTTATTGACCGAGCCAGGCAAGATATCCGTAGCGT...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGCTTGTCCTACGTCACTaGAGGGAGGAAGGGCCATTT +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREELVLRH*REEGPF
Trigger: AAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAG...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTGTCTGGACCTCAATGTaGTCTCGGAGAAGCAGCCAC +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIVWTSM*SRRSSH
Trigger: GTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGAGAGCCATCCAAGCATaGCAGCCTTTGAACTTGCTC +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTRAIQA*QPLNLL
Trigger: GAGCAAGTTCAAAGGCTGGCATGCTTGGATGGCTCT...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGGCTCCAGAGGAGCCCTaGCTGCTACATGAAAGGTTG +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRREAPEEP*LLHERL
Trigger: CAACCTTTCATGTAGCAGGCAGGGCTCCTCTGGAGC...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CCA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAACGTGGTGCAATAATTaGTTTATAACCTCATTCGTG +
Preference number: 4 (lower is better)
Translates to: QSRGTACGHSPPELTCIQTWCNN*FITSFV
Trigger: CACGAATGAGGTTATAAACCAATTATTGCACCACGT...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGATCTTTTGGAGCCATCAACAACTGCCAAAGAAGCAATCCCGACCGTCGAATATCACATCCCGTAGCTaGGAGAGTCCACTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: LIFWSHQQLPKKQSRPSNITSRS*ESPLFL
Trigger: GAGAAACAGTGGACTCTCCCAGCTACGGGATGTGAT...ATTCGACGGTCGGGATTGCTTCTTTGGCAGTTGTTGATGGCTCCAAAAGATCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550724.2
CDS-3UTR CCA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTCGAGCTCCTGGGATATaGACCGTTTCTTTAAATTTA +
Preference number: 4 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLRAPGI*TVSLNL
Trigger: TAAATTTAAAGAAACGGTCCATATCCCAGGAGCTCG...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATACTCTGTCTTCCTCTATaGTCAGAGGCAGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPILCLPL*SEAVER
Trigger: CCTCTCCACTGCCTCTGACCATAGAGGAAGACAGAG...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAAATAGATGGACTGTGTaGACGAAAGTTTTCAATGAT +
Preference number: 4 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLNRWTV*TKVFND
Trigger: ATCATTGAAAACTTTCGTCCACACAGTCCATCTATT...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACAATAGATGGACTGTGTaGACGAAAGTTTTCAATGAT +
Preference number: 4 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDNRWTV*TKVFND
Trigger: ATCATTGAAAACTTTCGTCCACACAGTCCATCTATT...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGAAAGAGACAGGCCGGTaGAGAAGACTGCCGCTGCCA +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMKETGR*RRLPLP
Trigger: TGGCAGCGGCAGTCTTCTCCACCGGCCTGTCTCTTT...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGTGTACGTTCCTGAAGTaGGTTGGCTACAAATACACC +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLCTFLK*VGYKYT
Trigger: GGTGTATTTGTAGCCAACCCACTTCAGGAACGTACA...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCTCCTGGTGTAAGGTATaGTACATAAGAGTCCAATGC +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSSWCKV*YIRVQC
Trigger: GCATTGGACTCTTATGTACCATACCTTACACCAGGA...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTACTCAACACAGCGGTTaGCAAGCACCTGGAAGGCAG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRITQHSG*QAPGRQ
Trigger: CTGCCTTCCAGGTGCTTGCCAACCGCTGTGTTGAGT...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACATGGCTTTACCTATGTaGCTCCTTGAGAGATCATTG +
Preference number: 4 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDMALPM*LLERSL
Trigger: CAATGATCTCTCAAGGAGCCACATAGGTAAAGCCAT...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTACTTAGCAATGGCTaGAGGACTTCATGGGATGAC +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTALLSNG*RTSWDD
Trigger: GTCATCCCATGAAGTCCTCCAGCCATTGCTAAGTAG...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATCGCAACAGCCACCCTTaGTCATGTCTCGATCCATCT +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNRNSHP*SCLDPS
Trigger: AGATGGATCGAGACATGACCAAGGGTGGCTGTTGCG...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGTCCTCTCTCGGCAAATaGAAGTTTGGGCAGTTTTCT +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLSSLGK*KFGQFS
Trigger: AGAAAACTGCCCAAACTTCCATTTGCCGAGAGAGGA...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTTCTACAGTCTATGGGTaGGAATCTGACTGTAGCTAT +
Preference number: 4 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFSTVYG*ESDCSY
Trigger: ATAGCTACAGTCAGATTCCCACCCATAGACTGTAGA...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTTCCACTGTAACAAACTaGAGCCATTATAGTGCACGG +
Preference number: 4 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACSTVTN*SHYSAR
Trigger: CCGTGCACTATAATGGCTCCAGTTTGTTACAGTGGA...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGCTGAATGTGAACCACTaGCCACATGCCACCAGAGAC +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREELNVNH*PHATRD
Trigger: GTCTCTGGTGGCATGTGGCCAGTGGTTCACATTCAG...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATACTGAATGTGAACCACTaGCCACATGCCACCAGAGAC +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPILNVNH*PHATRD
Trigger: GTCTCTGGTGGCATGTGGCCAGTGGTTCACATTCAG...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCAAGATAAAGGTCTCTTaGGATGCCACCATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSKIKVS*DATILF
Trigger: GAAGAGAATGGTGGCATCCCAAGAGACCTTTATCTT...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTCGGATGGCAGGGATGTaGAAGAGGCGAGTGAACAAG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIRMAGM*KRRVNK
Trigger: CTTGTTCACTCGCCTCTTCCACATCCCTGCCATCCG...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTGTGCGAGGAGCTGATTaGACAGCAGTTGCAGGTGCT +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIVRGAD*TAVAGA
Trigger: AGCACCTGCAACTGCTGTCCAATCAGCTCCTCGCAC...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGGTAAAAGAGGTCCGTaGCGGAGCAGTTCTGGGAAT +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIGKRGP*RSSSGN
Trigger: ATTCCCAGAACTGCTCCGCCACGGACCTCTTTTACC...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCTCGATGAGGTTCAGCTaGCCATTTCGCTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSSMRFS*PFRFTL
Trigger: CAAAGTGAAGCGAAATGGCCAGCTGAACCTCATCGA...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGTGTGGACCCTGTCTGTaGAGAGGACCACAGAGGGGT +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMCGPCL*RGPQRG
Trigger: ACCCCTCTGTGGTCCTCTCCACAGACAGGGTCCACA...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGTCCTTCCTGGTGAGGTaGCGGAGGATGATGAGCAGG +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMSFLVR*RRMMSR
Trigger: CCTGCTCATCATCCTCCGCCACCTCACCAGGAAGGA...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGTGGAGGAGGTTGCCTaGGGTCTGGGAGTTGATCTG +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMVEEVA*GLGVDL
Trigger: CAGATCAACTCCCAGACCCCAGGCAACCTCCTCCAC...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAGGTGTGATGGCGAGGTaGCGGCATAGCTGGTTGATG +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTGVMAR*RHSWLM
Trigger: CATCAACCAGCTATGCCGCCACCTCGCCATCACACC...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGTGCTGTGGGTATACATaGGTGTCTGGCGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRRECCGYT*VSGAAP
Trigger: TGGAGCTGCGCCAGACACCCATGTATACCCACAGCA...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTGGACAAAGACCTATTTaGGGCAAAGATGCAGTGGGT +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAGQRPI*GKDAVG
Trigger: ACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCC...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGGTTACAGGGAGGAGATaGATGCTAACGGCTCTATCT +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKVTGRR*MLTALS
Trigger: AGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAAC...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGTTTAGGGCCAAGGTTTaGATCTGTCTGGACCTCAAT +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRFRAKV*ICLDLN
Trigger: ATTGAGGTCCAGACAGATCCAAACCTTGGCCCTAAA...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGAAAGGGCAAGCCTCCTaGGACATCCTCCGAAGACTC +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMKGQAS*DILRRL
Trigger: GAGTCTTCGGAGGATGTCTCAGGAGGCTTGCCCTTT...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAAGTTTCCTCATCACCTaGACTTTCCCTTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTSFLIT*TFPFML
Trigger: CAGCATGAAAGGGAAAGTTCAGGTGATGAGGAAACT...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAACCACCTGGCACACCTaGAGGGTGTTCTGGTCAATG +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTTTWHT*RVFWSM
Trigger: CATTGACCAGAACACCCTTCAGGTGTGCCAGGTGGT...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGGCACGACTTGTAAACTaGCCATCCGAAATATTATAC +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLARLVN*PSEILY
Trigger: GTATAATATTTCGGATGGTCAGTTTACAAGTCGTGC...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGATTCTGGGTCCTCCCTaGAGGACCATCGTCACTGGA +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMILGPP*RTIVTG
Trigger: TCCAGTGACGATGGTCCTTCAGGGAGGACCCAGAAT...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTGAGCTGGACTCGGTCTaGTTGCTCAAGCTACACAGT +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIELDSV*LLKLHS
Trigger: ACTGTGTAGCTTGAGCAATCAGACCGAGTCCAGCTC...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGTTGATTCAGGTGCCATaGGCAAGCTATGTAGCAAGG +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTLIQVP*ASYVAR
Trigger: CCTTGCTACATAGCTTGCTCATGGCACCTGAATCAA...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCAAGAGGCAATGCCTCTaGTCTTGGAACACAAAGTCT +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSKRQCL*SWNTKS
Trigger: AGACTTTGTGTTCCAAGATCAGAGGCATTGCCTCTT...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGGTGACTGAGGTAAGGTaGGATGAGAACATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEVTEVR*DENMQA
Trigger: AGCCTGCATGTTCTCATCTCACCTTACCTCAGTCAC...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGATGAGTGCCTGGGTCTaGTGCAATACTGGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMMSAWV*CNTGAS
Trigger: GCTGGCACCAGTATTGCATCAGACCCAGGCACTCAT...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCTTGCGGAATCCAGATTaGCTTTCTTTACAAGACACA +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSLRNPD*LSLQDT
Trigger: TGTGTCTTGTAAAGAAAGTCAATCTGGATTCCGCAA...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTTTGCGGAATCCAGATTaGCTTTCTTTACAAGACACA +
Preference number: 4 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFLRNPD*LSLQDT
Trigger: TGTGTCTTGTAAAGAAAGTCAATCTGGATTCCGCAA...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATATTCACCATCCAAACTTaGCAAACCAATCAAGTCATT +
Preference number: 4 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIFTIQT*QTNQVI
Trigger: AATGACTTGATTGGTTTGTCAAGTTTGGATGGTGAA...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATGCTCAGCGTCTGCTCTaGATGGGCACAACTCTTAAA +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNAQRLL*MGTTLK
Trigger: TTTAAGAGTTGTGCCCATTCAGAGCAGACGCTGAGC...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAGTTCTTATTGACAGCTaGGCTGGGGCACAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTVLIDS*AGAQQQ
Trigger: CTGCTGCTGTGCCCCAGCTCAGCTGTCAATAAGAAC...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGAATCTGGTGGCCATaGGGGACAATGTCCAAGAAG +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNRIWWP*GTMSKK
Trigger: CTTCTTGGACATTGTCCCTCATGGCCACCAGATTCT...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGATAAATACAGCGATGTaGTTCTGTGAGACCTGGCAA +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRINTAM*FCETWQ
Trigger: TTGCCAGGTCTCACAGAATCACATCGCTGTATTTAT...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAGCCAACAGAAGCTTCTaGACTCCTCCTGGGGAGGTA +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTANRSF*TPPGEV
Trigger: TACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGC...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCAACTGCTAAGATGATGTaGTTCAATTGGATGCTGCTT +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSTAKMM*FNWMLL
Trigger: AAGCAGCATCCAATTGAAGCACATCATCTTAGCAGT...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATCTAAGACACTACGGCTaGCATATCCCAGTGTGTTGC +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDLRHYG*HIPVCC
Trigger: GCAACACACTGGGATATGGCAGCCGTAGTGTCTTAG...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCACAGCTAGTATTTGCTaGTTGATCCTCTTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSTASIC*LILFQC
Trigger: ACACTGAAAGAGGATCAAGCAGCAAATACTAGCTGT...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTACAGCTAGTATTTGCTaGTTGATCCTCTTTCAGTGT +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTTASIC*LILFQC
Trigger: ACACTGAAAGAGGATCAAGCAGCAAATACTAGCTGT...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGTTTTTGTTCCAGTTCTaGAACACTCTGCAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRFLFQF*NTLQLS
Trigger: AGACAGCTGCAGAGTGTTGCAGAACTGGAACAAAAA...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATACCAAAAGGAAACTGCTaGTGGACACAGCTTGGTCAG +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIPKGNC*WTQLGQ
Trigger: CTGACCAAGCTGTGTCCAGCAGCAGTTTCCTTTTGG...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGAGTCGATCCATGAGCTaGACAAGGCCACTGCGTACC +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMSRSMS*TRPLRT
Trigger: GGTACGCAGTGGCCTTGTGCAGCTCATGGATCGACT...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGTGCCATTTTCCAGAATaGTTTCTGCGTATTTCCCCA +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLCHFPE*FLRISP
Trigger: TGGGGAAATACGCAGAAAGCATTCTGGAAAATGGCA...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTCTGTACCTCCACAACTaGAAGTCGCTCTCCAGCACT +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRILYLHN*KSLSST
Trigger: AGTGCTGGAGAGCGACTTGCAGTTGTGGAGGTACAG...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGAAAGGTCTCTTGGGATaGCACCATTCTCTTCGTAGA +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKKGLLG*HHSLRR
Trigger: TCTACGAAGAGAATGGTGGCATCCCAAGAGACCTTT...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATTGGGAATGGATGCAATaGTGTAAAGACTGCGCCAGG +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNWEWMQ*CKDCAR
Trigger: CCTGGCGCAGTCTTTACAGCATTGCATCCATTCCCA...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATGCTCTGGTGCTGTCTaGAGGAAAGAGCAGATCTGT +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPICSGAV*RKEQIC
Trigger: ACAGATCTGCTCTTTCCTGCAGACAGCACCAGAGCA...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATCACAACAACAAAAGCTaGCCCGGGGAAATTCACGTC +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDHNNKS*PGEIHV
Trigger: GACGTGAATTTCCCCGGGGCAGCTTTTGTTGTTGTG...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAATATACGAGCACCCGTaGCCACGGTGCCTTGTACAG +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTIYEHP*PRCLVQ
Trigger: CTGTACAAGGCACCGTGGGCACGGGTGCTCGTATAT...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCTCTTATCTCCACGACTaGGAAGCCTTTGATGGGGCG +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSSYLHD*EAFDGA
Trigger: CGCCCCATCAAAGGCTTCGCAGTCGTGGAGATAAGA...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCGCTCCTTCCCGGCCTTaGTGTACTTGCTCTTGTCAA +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSAPSRP*CTCSCQ
Trigger: TTGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGC...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGGATGTACTGCACAAGTaGCACGTCCATCTCCAGGGT +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRREDVLHK*HVHLQG
Trigger: ACCCTGGAGATGGACGTGGCACTTGTGCAGTACATC...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR GCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGCTGGTTGATGTACTaGACAAGTGCCACGTCCATC +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNSWLMY*TSATSI
Trigger: GATGGACGTGGCACTTGTGCAGTACATCAACCAGCT...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTAGCTCCTTACACACCTaGCACAGGAAGTGGCGGAAA +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRISSLHT*HRKWRK
Trigger: TTTCCGCCACTTCCTGTGGCAGGTGTGTAAGGAGCT...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACAGGATATCCGCTTCCTaGAGGTCTTGCTCAGGGTCC +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNRISAS*RSCSGS
Trigger: GGACCCTGAGCAAGACCTGCAGGAAGCGGATATCCT...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCATGATGTGCTTCAATTaGATGCTGCTTGCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSMMCFN*MLLAQD
Trigger: GTCTTGGGCAAGCAGCATCCAATTGAAGCACATCAT...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTATGATGTGCTTCAATTaGATGCTGCTTGCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAMMCFN*MLLAQD
Trigger: GTCTTGGGCAAGCAGCATCCAATTGAAGCACATCAT...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTAAGCAAAGCCCCACATaGCTTTATCAGGAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAKQSPT*LYQECC
Trigger: ACAACACTCCTGATAAAGCCATGTGGGGCTTTGCTT...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCCTCCACCTGCCACTaGCACCTTTGTAAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDASTCH*HLCKSL
Trigger: CAAACTTTTACAAAGGTGCCAGTGGCAGGTGGAGGC...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATGCCTCCACCTGCCACTaGCACCTTTGTAAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNASTCH*HLCKSL
Trigger: CAAACTTTTACAAAGGTGCCAGTGGCAGGTGGAGGC...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGTTTTCAATGATCCCCTaGCACAAGCCAAAGCCACCA +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTFSMIP*HKPKPP
Trigger: TGGTGGCTTTGGCTTGTGCCAGGGGATCATTGAAAA...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCATTCCTCCATCACGTCTaGCTGAATCACTTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSFLHHV*LNHFFY
Trigger: ATAAAAGAAGTGATTCAGCCAGACGTGATGGAGGAA...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTTTCCTCCATCACGTCTaGCTGAATCACTTCTTTTAT +
Preference number: 4 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTFLHHV*LNHFFY
Trigger: ATAAAAGAAGTGATTCAGCCAGACGTGATGGAGGAA...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCCAGTTTCCCCTGCATaGCATCATCAACTTCACTTT +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAPVSPA*HHQLHF
Trigger: AAAGTGAAGTTGATGATGCCATGCAGGGGAAACTGG...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGCCAGTTTCCCCTGCATaGCATCATCAACTTCACTTT +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKPVSPA*HHQLHF
Trigger: AAAGTGAAGTTGATGATGCCATGCAGGGGAAACTGG...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTTGGACACACAAGCTaGCTGGCTCAGGATGGCTTT +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIFGHTS*LAQDGF
Trigger: AAAGCCATCCTGAGCCAGCCAGCTTGTGTGTCCAAA...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTTGGTTTTTGTCAATGTaGTGTCAGGTTCAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCWFLSM*CQVQKR
Trigger: CCGCTTCTGAACCTGACACCACATTGACAAAAACCA...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGCAACTTTCTCCATGTTaGCGCCAGTACCAAGTCGGA +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEQLSPC*RQYQVG
Trigger: TCCGACTTGGTACTGGCGCCAACATGGAGAAAGTTG...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATCAACTTTCTCCATGTTaGCGCCAGTACCAAGTCGGA +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNQLSPC*RQYQVG
Trigger: TCCGACTTGGTACTGGCGCCAACATGGAGAAAGTTG...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGATAGACTCTACAGGTaGCCCAATGCTGACGATGAG +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDDRLYR*PNADDE
Trigger: CTCATCGTCAGCATTGGGCCACCTGTAGAGTCTATC...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATGTATTTCCCCAATTGTaGAATGTACATCAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYVFPQL*NVHQCS
Trigger: AGAGCACTGATGTACATTCCACAATTGGGGAAATAC...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCGTATTTCCCCAATTGTaGAATGTACATCAGTGCTCT +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGVFPQL*NVHQCS
Trigger: AGAGCACTGATGTACATTCCACAATTGGGGAAATAC...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATGGAAGCAACATGGACTaGACTGCCTGTACTACCTTC +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNGSNMD*TACTTF
Trigger: GAAGGTAGTACAGGCAGTCCAGTCCATGTTGCTTCC...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCCAGCACTACATTCCTaGGCTACTAGGTTAAGAACT +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAPALHS*ATRLRT
Trigger: AGTTCTTAACCTAGTAGCCCAGGAATGTAGTGCTGG...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTTTTCATCATCTGCAATaGGAGGCGGGTGAGGGTCTG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIFHHLQ*EAGEGL
Trigger: CAGACCCTCACCCGCCTCCCATTGCAGATGATGAAA...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAAGATAAAGGTCTCTTaGGATGCCACCATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRKIKVS*DATILF
Trigger: GAAGAGAATGGTGGCATCCCAAGAGACCTTTATCTT...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGTACATTATTGCTGTCTaGAGAGCGGGTTACTACTGT +
Preference number: 4 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLYIIAV*RAGYYC
Trigger: ACAGTAGTAACCCGCTCTCCAGACAGCAATAATGTA...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGTTTGGATTCGGAAATTaGGAACTCTTCGGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTFGFGN*ELFGGE
Trigger: TTCCCCTCCGAAGAGTTCCCAATTTCCGAATCCAAA...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGTCGATGAGGTTCAGCTaGCCATTTCGCTTCACTTTG +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTSMRFS*PFRFTL
Trigger: CAAAGTGAAGCGAAATGGCCAGCTGAACCTCATCGA...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGTCAAACTTGGGCTTTaGCACGCCATACTTCCTCAG +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDVKLGL*HAILPQ
Trigger: CTGAGGAAGTATGGCGTGCCAAAGCCCAAGTTTGAC...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGATGTGGACGAAAGTTTaGAAAAGCAAAATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTMWTKV*KSKMLP
Trigger: TGGCAACATTTTGCTTTTCCAAACTTTCGTCCACAT...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAGAGGCAGCTCAGCCCTaGCATACACACTTACATGGG +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTEAAQP*HTHLHG
Trigger: CCCATGTAAGTGTGTATGCCAGGGCTGAGCTGCCTC...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGAATTTAAATACCACCTaGAAGACAACGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLNLNTT*KTTRMQ
Trigger: CTGCATTCTCGTTGTCTTTCAGGTGGTATTTAAATT...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GCCATCAACAACTGCCAAAGAAGCAATCCCGACCGTCGAATGATGTCTCGATTCATTTCAGGGCAAATTTaGTCTTTTGGAGCCATCAAC +
Preference number: 4 (lower is better)
Translates to: AINNCQRSNPDRRMMSRFISGQI*SFGAIN
Trigger: GTTGATGGCTCCAAAAGATCAAATTTGCCCTGAAAT...GAATCGAGACATCATTCGACGGTCGGGATTGCTTCTTTGGCAGTTGTTGATGGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550724.2
CDS-3UTR TCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGACCTGGAAAAGGGAGTaGGGTTTATTATCGAAAGAG +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKTWKRE*GLLSKE
Trigger: CTCTTTCGATAATAAACCTCACTCCCTTTTCCAGGT...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACGGGTGTTCTGGTCAATaGCCTGGAAAAGGGAGTGAG +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNGCSGQ*PGKGSE
Trigger: CTCACTCCCTTTTCCAGGTCATTGACCAGAACACCC...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCCTAGTATTTGCTGCTTaGTCCTCTTTCAGTGTGTTG +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSLVFAA*SSFSVL
Trigger: CAACACACTGAAAGAGGATCAAGCAGCAAATACTAG...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACGAGCTGGACTCGGTCTaGTTGCTCAAGCTACACAGT +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNELDSV*LLKLHS
Trigger: ACTGTGTAGCTTGAGCAATCAGACCGAGTCCAGCTC...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGTTGATTCAGGTGCCATaGGCAAGCTATGTAGCAAGG +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREELIQVP*ASYVAR
Trigger: CCTTGCTACATAGCTTGCTCATGGCACCTGAATCAA...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATGGCGTGCAATTCTCTaGAGTTTGGCAAGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIWRAIL*SLASFL
Trigger: CAGGAAACTTGCCAAACTTCAGAGAATTGCACGCCA...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTGTGACTGAGGTAAGGTaGGATGAGAACATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIVTEVR*DENMQA
Trigger: AGCCTGCATGTTCTCATCTCACCTTACCTCAGTCAC...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCTTCACCATCCAAACTTaGCAAACCAATCAAGTCATT +
Preference number: 4 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGFTIQT*QTNQVI
Trigger: AATGACTTGATTGGTTTGTCAAGTTTGGATGGTGAA...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTAGTTTTCAGAAGCTCTaGTTTCCCCTCCCACAATTT +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCSFQKL*FPLPQF
Trigger: AAATTGTGGGAGGGGAAATCAGAGCTTCTGAAAACT...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACATCTAAAGCAGGAAGATaGACACATAAAGCTCCCTGT +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTSKAGR*THKAPC
Trigger: ACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGA...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCGTCTCCATCTGGACTTaGGTGTCTGGGTCACTAAAG +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSVSIWT*VSGSLK
Trigger: CTTTAGTGACCCAGACACTCAAGTCCAGATGGAGAC...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGAAGCATGCCAGCCTTTaGACTTGCTCAGCAAGAGTA +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEKHASL*TCSARV
Trigger: TACTCTTGCTGAGCAAGTTCAAAGGCTGGCATGCTT...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCGATCATCCTCATCACTaGCAAATCGGTTGTTTTGGA +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSDHPHH*QIGCFG
Trigger: TCCAAAACAACCGATTTGGCAGTGATGAGGATGATC...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAAGGGCAGTTGTGACCTaGTGTAGCATTTCCAACACT +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIRAVVT*CSISNT
Trigger: AGTGTTGGAAATGCTACAGCAGGTCACAACTGCCCT...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGCCTCTGCTCACGGTCTaGTATGTCACTATTTATGAG +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTPLLTV*YVTIYE
Trigger: CTCATAAATAGTGACATAGCAGACCGTGAGCAGAGG...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGGCAGCATTTTCTTTTTaGTTATGTGGGATGTGTCGG +
Preference number: 4 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKAAFSF*LCGMCR
Trigger: CCGACACATCCCACATAAGCAAAAAGAAAATGCTGC...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGTTCTCCAGTTTCCCCTaGATGGCATCATCAACTTCA +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTFSSFP*MASSTS
Trigger: TGAAGTTGATGATGCCATGCAGGGGAAACTGGAGAA...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGTGGACTCGGTCTGATTaGTCAAGCTACACAGTCGAT +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEWTRSD*SSYTVD
Trigger: ATCGACTGTGTAGCTTGAGCAATCAGACCGAGTCCA...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACTCACTTCTGCAGCCATaGTGTTTGCCACATGCCCAC +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNSLLQP*CLPHAH
Trigger: GTGGGCATGTGGCAAACAGCATGGCTGCAGAAGTGA...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTTGCCATTTTCCAGAATaGTTTCTGCGTATTTCCCCA +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCCHFPE*FLRISP
Trigger: TGGGGAAATACGCAGAAAGCATTCTGGAAAATGGCA...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTAATGTGTCTGACGCTTaGGAAGTCTTTCTACAGTCT +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCNVSDA*EVFLQS
Trigger: AGACTGTAGAAAGACTTCGCAAGCGTCAGACACATT...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATCAACATGGACTGGACTaGCTGTACTACCTTCTCAGT +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDQHGLD*LYYLLS
Trigger: ACTGAGAAGGTAGTACAGGCAGTCCAGTCCATGTTG...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGGTGAGATGAGAACATaGAGGCTCGAACAGGCGGAA +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMGEMRT*RLEQAE
Trigger: TTCCGCCTGTTCGAGCCTGCATGTTCTCATCTCACC...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATTGCTGGCTACATTATTaGTGTCTGGAGAGCGGGTTA +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDCWLHY*CLESGL
Trigger: TAACCCGCTCTCCAGACAGCAATAATGTAGCCAGCA...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTACAGAGAGGAGTCTTTaGGGAATCCAGATTGACTTT +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTATERSL*GIQIDF
Trigger: AAAGTCAATCTGGATTCCGCAAAGACTCCTCTCTGT...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAACAGAGAGGAGTCTTTaGGGAATCCAGATTGACTTT +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTTERSL*GIQIDF
Trigger: AAAGTCAATCTGGATTCCGCAAAGACTCCTCTCTGT...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGACGCTACGGATATCTTaGCTGGCTCGGTCAATAACA +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREETLRIS*LARSIT
Trigger: TGTTATTGACCGAGCCAGGCAAGATATCCGTAGCGT...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGCATGTCGGACATCGATaGATGCGCACCTCTCAAAGT +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRREHVGHR*MRTSQS
Trigger: ACTTTGAGAGGTGCGCATGCATCGATGTCCGACATG...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR GCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACCTTGTCCTACGTCACTaGAGGGAGGAAGGGCCATTT +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNLVLRH*REEGPF
Trigger: AAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAG...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGGCAAATTTGATCTTTTaGAGCCATCAACAACTGCCA +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRANLIF*SHQQLP
Trigger: TGGCAGTTGTTGATGGCTCCAAAAGATCAAATTTGC...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGGTTAGGATCACATCCCGTAGCTGGGAGAGTCCACTGTTTCTCTCTCCTTCTGCAAATTTGATCTTTTaGAGCCATCAACAACTGCCA +
Preference number: 4 (lower is better)
Translates to: LVRITSRSWESPLFLSPSANLIF*SHQQLP
Trigger: TGGCAGTTGTTGATGGCTCCAAAAGATCAAATTTGC...AGAAGGAGAGAGAAACAGTGGACTCTCCCAGCTACGGGATGTGATCCTAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550724.2
CDS-3UTR CCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCATCACATCCCGTAGCTaGGAGAGTCCACTGTTTCTC +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSITSRS*ESPLFL
Trigger: GAGAAACAGTGGACTCTCCCAGCTACGGGATGTGAT...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATACAGGATTCTTAACATaGAACAAGCTAACACAGACA +
Preference number: 4 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYTGFLT*NKLTQT
Trigger: TGTCTGTGTTAGCTTGTTCCATGTTAAGAATCCTGT...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTACCTTTGTAAAAGTTTaGACCGCAATAGCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCTFVKV*TAIAPD
Trigger: GTCAGGAGCTATTGCGGTCCAAACTTTTACAAAGGT...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTTCCTGGTGTAAGGTATaGTACATAAGAGTCCAATGC +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCSWCKV*YIRVQC
Trigger: GCATTGGACTCTTATGTACCATACCTTACACCAGGA...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTACTTCTCTTCGCTCCTaGTGTAAGGTATGGTACATA +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTATSLRS*CKVWYI
Trigger: TATGTACCATACCTTACACCAGGAGCGAAGAGAAGT...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTGTTTCTCACTGGAGCTaGACTCGGTCTGATTGCTCA +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIVSHWS*TRSDCS
Trigger: TGAGCAATCAGACCGAGTCCAGCTCCAGTGAGAAAC...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGGTCTGATGCAATACTaGTGCCAGCATCATTGTCAC +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDGLMQY*CQHHCH
Trigger: GTGACAATGATGCTGGCACCAGTATTGCATCAGACC...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAGGTGGCGGCATAGCTaGTTGATGTACTGCACAAGT +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSRWRHS*LMYCTS
Trigger: ACTTGTGCAGTACATCAACCAGCTATGCCGCCACCT...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGAGGTGGCGGCATAGCTaGTTGATGTACTGCACAAGT +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRRERWRHS*LMYCTS
Trigger: ACTTGTGCAGTACATCAACCAGCTATGCCGCCACCT...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAGGTTTGGATCTGTCTaGACCTCAATGTGCTCTCGG +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSRFGSV*TSMCSR
Trigger: CCGAGAGCACATTGAGGTCCAGACAGATCCAAACCT...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCTCAGGGCATCCGCCATaGTCAGAGTCTGTAAATTTG +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSSGHPP*SESVNL
Trigger: CAAATTTACAGACTCTGATCATGGCGGATGCCCTGA...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAGACCGCAATAGCTCCTaGCAGGCTTCTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTDRNSS*QASSSL
Trigger: CAAAGAAGAAGAAGCCTGTCAGGAGCTATTGCGGTC...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACGACCGCAATAGCTCCTaGCAGGCTTCTTCTTCTTTG +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNDRNSS*QASSSL
Trigger: CAAAGAAGAAGAAGCCTGTCAGGAGCTATTGCGGTC...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAAGTTTCCTCATCACCTaGACTTTCCCTTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPISFLIT*TFPFML
Trigger: CAGCATGAAAGGGAAAGTTCAGGTGATGAGGAAACT...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTTCCATCACGTCTGGCTaGATCACTTCTTTTATACTT +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTASITSG*ITSFIL
Trigger: AAGTATAAAAGAAGTGATTCAGCCAGACGTGATGGA...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGCAGGTCAGAAGGAGCTaGCATGCTGCGAAGAAAAAC +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMQVRRS*HAAKKN
Trigger: GTTTTTCTTCGCAGCATGTCAGCTCCTTCTGACCTG...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTTGGCGTGCAATTCTCTaGAGTTTGGCAAGTTTCCTG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIWRAIL*SLASFL
Trigger: CAGGAAACTTGCCAAACTTCAGAGAATTGCACGCCA...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCTCCTGTTGCAGGAAGTaGGGTGTGAATAGAGAGACT +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSSCCRK*GVNRET
Trigger: AGTCTCTCTATTCACACCTCACTTCCTGCAACAGGA...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAGTGACTGAGGTAAGGTaGGATGAGAACATGCAGGCT +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTVTEVR*DENMQA
Trigger: AGCCTGCATGTTCTCATCTCACCTTACCTCAGTCAC...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCAATTCACGTCCATGTTaGCTTTGGATTCGGAAATTG +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSNSRPC*LWIRKL
Trigger: CAATTTCCGAATCCAAAGTCAACATGGACGTGAATT...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCGTATCAAAGAGACTCTaGTTTACTACAGACACGGTT +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSVSKRL*FTTDTV
Trigger: AACCGTGTCTGTAGTAAATCAGAGTCTCTTTGATAC...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTTCAATAACAAATTTGTaGAATCCTTCCAGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCSITNL*NPSSVR
Trigger: CCTGACGCTGGAAGGATTTCACAAATTTGTTATTGA...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCTCAATAACAAATTTGTaGAATCCTTCCAGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFSITNL*NPSSVR
Trigger: CCTGACGCTGGAAGGATTTCACAAATTTGTTATTGA...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR TCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCTCAATAACAAATTTGTaGAATCCTTCCAGCGTCAGG +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSSITNL*NPSSVR
Trigger: CCTGACGCTGGAAGGATTTCACAAATTTGTTATTGA...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTGCTTCAATTGGATGCTaGTTGCCCAAGACACTTGTG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIASIGC*LPKTLV
Trigger: CACAAGTGTCTTGGGCAAGCAGCATCCAATTGAAGC...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCTTCAATGTCTCTCCCTaGAAGGAGCTGTCACTGTCA +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSFNVSP*KELSLS
Trigger: TGACAGTGACAGCTCCTTGCAGGGAGAGACATTGAA...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTGCATCACCAAGTAGGTaGCACAGGTATATATGGGTG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIASPSR*HRYIWV
Trigger: CACCCATATATACCTGTGGCACCTACTTGGTGATGC...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCAAAATTTATTAGAGACTaGAGTGCATCAACCAAGTTC +
Preference number: 4 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSKFIRD*SASTKF
Trigger: GAACTTGGTTGATGCACTGCAGTCTCTAATAAATTT...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAAGTTCTGCAACACTCTaGAGCTGTCTCTCCATGGCA +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTSSATL*SCLSMA
Trigger: TGCCATGGAGAGACAGCTGCAGAGTGTTGCAGAACT...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCTCCAGTTTCCCCTaGATGGCATCATCAACTTCA +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIFSSFP*MASSTS
Trigger: TGAAGTTGATGATGCCATGCAGGGGAAACTGGAGAA...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGACGCTACGGATATCTTaGCTGGCTCGGTCAATAACA +
Preference number: 4 (lower is better)
Translates to: VCTHVSVYMSREKSGRRETLRIS*LARSIT
Trigger: TGTTATTGACCGAGCCAGGCAAGATATCCGTAGCGT...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR GCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAGGAAAAGCAAAATGTTaGCAACTCCTCACGCAGGGC +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTGKAKC*QLLTQG
Trigger: GCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCC...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGCTGTTCAGCCAGGTTaGTTAGGATCACATCCCGTA +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMAVQPG*LGSHPV
Trigger: TACGGGATGTGATCCTAACCAACCTGGCTGAACAGC...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCCCAAATCGGTTGTTTTaGAGCTGTTCAGCCAGGTTG +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSPNRLF*SCSARL
Trigger: CAACCTGGCTGAACAGCTCCAAAACAACCGATTTGG...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTTTGTCTCTGACGGGGTaGACTGTTTCCACAGTCTTT +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRILSLTG*TVSTVF
Trigger: AAAGACTGTGGAAACAGTCCACCCCGTCAGAGACAA...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCGAGCTCCTGGGATATaGACCGTTTCTTTAAATTTA +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTARAPGI*TVSLNL
Trigger: TAAATTTAAAGAAACGGTCCATATCCCAGGAGCTCG...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTTCTTTGGTAATTTCTaGTCCATTGTACAGGATTCT +
Preference number: 4 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLFFGNF*SIVQDS
Trigger: AGAATCCTGTACAATGGACCAGAAATTACCAAAGAA...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGACCTTTGTAAAAGTTTaGACCGCAATAGCTCCTGAC +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTTFVKV*TAIAPD
Trigger: GTCAGGAGCTATTGCGGTCCAAACTTTTACAAAGGT...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGACACAACAGAGGTCATaGTCTCGCCAAAGGCTTCCT +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMTQQRS*SRQRLP
Trigger: AGGAAGCCTTTGGCGAGACCATGACCTCTGTTGTGT...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATCCTTCTCTGCTGTTGTaGTCCATATTTGAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNPSLLL*SIFEQH
Trigger: ATGCTGCTCAAATATGGACCACAACAGCAGAGAAGG...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATACCTTCTCTGCTGTTGTaGTCCATATTTGAGCAGCAT +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIPSLLL*SIFEQH
Trigger: ATGCTGCTCAAATATGGACCACAACAGCAGAGAAGG...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGTCTACAGTCTATGGGTaGGAATCTGACTGTAGCTAT +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTSTVYG*ESDCSY
Trigger: ATAGCTACAGTCAGATTCCCACCCATAGACTGTAGA...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGTCAGCATCCCTCGGATaGCAAATTTTGGCAGAGCAG +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMSASLG*QILAEQ
Trigger: CTGCTCTGCCAAAATTTGCCATCCGAGGGATGCTGA...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAAGGCTGCCATGTCCGTaGTCCACAAGAAGTTTCCTA +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTRLPCP*STRSFL
Trigger: TAGGAAACTTCTTGTGGACCACGGACATGGCAGCCT...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTTGCTCTTGTCAAACTTaGGCTTTGGCACGCCATACT +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRICSCQT*ALARHT
Trigger: AGTATGGCGTGCCAAAGCCCAAGTTTGACAAGAGCA...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTTCCAGAGAGGAGTACTaGGGAAGCTTGATCATGAAC +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRISREEY*GSLIMN
Trigger: GTTCATGATCAAGCTTCCCCAGTACTCCTCTCTGGA...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATCTTCACGGTAGTGAATaGCACAACGAAGTTTCTCCA +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNLHGSE*HNEVSP
Trigger: TGGAGAAACTTCGTTGTGCCATTCACTACCGTGAAG...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGTCTTCCAGGAGGCCCTaGAATGTGGACGAAAGTTTG +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMSSRRP*NVDESL
Trigger: CAAACTTTCGTCCACATTCCAGGGCCTCCTGGAAGA...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGCAAATACTGCTAAGATaGTGTGCTTCAATTGGATGC +
Preference number: 4 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTQILLR*CASIGC
Trigger: GCATCCAATTGAAGCACATCATCTTAGCAGTATTTG...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTTGCAGCAGGCACAGTTaGAAGGAGCTTTTGAAAATC +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRICSRHS*KELLKI
Trigger: GATTTTCAAAAGCTCCTTTCAACTGTGCCTGCTGCA...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAGACGAAAGTTTTCAATaGTCCCCTGGCACAAGCCAA +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTDESFQ*SPGTSQ
Trigger: TTGGCTTGTGCCAGGGGATCATTGAAAACTTTCGTC...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGGGGTGTGAGGGTTTCTaGATAAGAGAATTCACTTCT +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEGCEGF*IREFTS
Trigger: AGAAGTGAATTCTCTTATTCAGAAACCCTCACACCC...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAAATAGTCAATGTGTCTaGCGCTTGCGAAGTCTTTCT +
Preference number: 4 (lower is better)
Translates to: PASTLQNLLDSTHSKLPINSQCV*RLRSLS
Trigger: AGAAAGACTTCGCAAGCGTCAGACACATTGACTATT...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCACTCACCTCCAGAGTTaGCTTGCATCCAATACAACT +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSTHLQS*LASNTT
Trigger: AGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGT...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTAGTCCATTCAAGGGATaGGGACTAAAGAGAACCAAG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRISPFKG*GLKRTK
Trigger: CTTGGTTCTCTTTAGTCCTCATCCCTTGAATGGACT...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp CAATCCCGACCGTCGAATGATGTCTCGATTCCTTTCAGTTTGTGGGCTGAAGAAAATTTAAATACCACCTaGACTTTCCCTTTCATGCTG +
Preference number: 4 (lower is better)
Translates to: QSRPSNDVSIPFSLWAEENLNTT*TFPFML
Trigger: CAGCATGAAAGGGAAAGTTCAGGTGGTATTTAAATT...TTCTTCAGCCCACAAACTGAAAGGAATCGAGACATCATTCGACGGTCGGGATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550724.2
CDS-3UTR GCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCCCTCTGCTCACGGTCTaGTATGTCACTATTTATGAG +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSPLLTV*YVTIYE
Trigger: CTCATAAATAGTGACATAGCAGACCGTGAGCAGAGG...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTCATATCCCAGTGTGTTaGCTCCATATTCAGCAACCT +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIHIPVC*LHIQQP
Trigger: AGGTTGCTGAATATGGAGGCAACACACTGGGATATG...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATAAGCCACTACTCCAATaGTTCCTGAAATTCCTCTAC +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDKPLLQ*FLKFLY
Trigger: GTAGAGGAATTTCAGGAAGCATTGGAGTAGTGGCTT...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGCCCATCTCGCTTCTCTaGTTCTGTAGTGAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMPISLL*FCSEAK
Trigger: TTTGGCTTCACTACAGAAGCAGAGAAGCGAGATGGG...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTAAAGGTCTCTTGGGATaGCACCATTCTCTTCGTAGA +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIKGLLG*HHSLRR
Trigger: TCTACGAAGAGAATGGTGGCATCCCAAGAGACCTTT...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGGTACGTTTCTACCTaGACCAGTTCATTCACTGAA +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNRYVST*TSSFTE
Trigger: TTCAGTGAATGAACTGGTGCAGGTAGAAACGTACCT...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAACGTGGTGCAATAATTaGTTTATAACCTCATTCGTG +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTTWCNN*FITSFV
Trigger: CACGAATGAGGTTATAAACCAATTATTGCACCACGT...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AACAACTGCCAAAGAAGCAATCCCGACCGTCGAATGATGTCTCGATTCCTTTCAATTCCGACGGGTTCTTaGTCTCAAAGGTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: NNCQRSNPDRRMMSRFLSIPTGS*SQRLKS
Trigger: AGATTTTAACCTTTGAGACCAAGAACCCGTCGGAAT...TGAAAGGAATCGAGACATCATTCGACGGTCGGGATTGCTTCTTTGGCAGTTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550724.2
CDS-3UTR CCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGTGTTTCTGTAATAGATaGACTGTGTGGACGAAAGTT +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTCFCNR*TVWTKV
Trigger: AACTTTCGTCCACACAGTCCATCTATTACAGAAACA...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGTATTATACACCAAGCTaGAGGCTAGGATTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRYYTPS*RLGFLK
Trigger: CTTTAAAAATCCTAGCCTCCAGCTTGGTGTATAATA...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTTGGTTTTTGTCAATGTaGTGTCAGGTTCAGAAGCGG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIWFLSM*CQVQKR
Trigger: CCGCTTCTGAACCTGACACCACATTGACAAAAACCA...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTTCCACTGTAACAAACTaGAGCCATTATAGTGCACGG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRISTVTN*SHYSAR
Trigger: CCGTGCACTATAATGGCTCCAGTTTGTTACAGTGGA...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGAAGATAAAGGTCTCTTaGGATGCCACCATTCTCTTC +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEKIKVS*DATILF
Trigger: GAAGAGAATGGTGGCATCCCAAGAGACCTTTATCTT...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCTTTGGATTCGGAAATTaGGAACTCTTCGGAGGGGAA +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSFGFGN*ELFGGE
Trigger: TTCCCCTCCGAAGAGTTCCCAATTTCCGAATCCAAA...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGTGCTCTTGTCAAACTTaGGCTTTGGCACGCCATACT +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMCSCQT*ALARHT
Trigger: AGTATGGCGTGCCAAAGCCCAAGTTTGACAAGAGCA...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAATGTGGACGAAAGTTTaGAAAAGCAAAATGTTGCCA +
Preference number: 4 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTMWTKV*KSKMLP
Trigger: TGGCAACATTTTGCTTTTCCAAACTTTCGTCCACAT...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGCAAATACTGCTAAGATaGTGTGCTTCAATTGGATGC +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEQILLR*CASIGC
Trigger: GCATCCAATTGAAGCACATCATCTTAGCAGTATTTG...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACAACACTGGAAGAAGGTaGCCAAGCATAGTAGCCTTA +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNNTGRR*PSIVAL
Trigger: TAAGGCTACTATGCTTGGTCACCTTCTTCCAGTGTT...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCGAATCTTTAAACCAGTaGGAAATCCTGGCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSESLNQ*EILALP
Trigger: AGGAAGAGCCAGGATTTCTCACTGGTTTAAAGATTC...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTAGAATTGTACGTTCCTaGAGTGGGTTGGCTACAAAT +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIRIVRS*SGLATN
Trigger: ATTTGTAGCCAACCCACTTCAGGAACGTACAATTCT...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATTCCATCACGTCTGGCTaGATCACTTCTTTTATACTT +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDSITSG*ITSFIL
Trigger: AAGTATAAAAGAAGTGATTCAGCCAGACGTGATGGA...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAACCTATGTGGCTCCTTaGGAGATCATTGAGAAGACT +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTTYVAP*EIIEKT
Trigger: AGTCTTCTCAATGATCTCTCAAGGAGCCACATAGGT...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAGTTTTCAGAAGCTCTaGTTTCCCCTCCCACAATTT +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSSFQKL*FPLPQF
Trigger: AAATTGTGGGAGGGGAAATCAGAGCTTCTGAAAACT...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR TCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAACTCACCTCCAGAGTTaGCTTGCATCCAATACAACT +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTTHLQS*LASNTT
Trigger: AGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGT...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTTCATCAACTTCACTTTaGCATTTTTGTTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTASSTSL*HFCSSS
Trigger: AGAACTGGAACAAAAATGGCAAAGTGAAGTTGATGA...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCTCTTTAGAGACAGTTTaGCACTTGGTGATTAAGATA +
Preference number: 4 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSSLETV*HLVIKI
Trigger: TATCTTAATCACCAAGTGCCAAACTGTCTCTAAAGA...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAAAGCAAAGCCCCACATaGCTTTATCAGGAGTGTTGT +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTKQSPT*LYQECC
Trigger: ACAACACTCCTGATAAAGCCATGTGGGGCTTTGCTT...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATTCCGACGGGTTCTTaGTCTCAAAGGTTAAAATCT +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEIPTGS*SQRLKS
Trigger: AGATTTTAACCTTTGAGACCAAGAACCCGTCGGAAT...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATGTTCCTGAAGTGGGTTaGCTACAAATACACCATTTT +
Preference number: 4 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNVPEVG*LQIHHF
Trigger: AAAATGGTGTATTTGTAGCCAACCCACTTCAGGAAC...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGTTCCTGAAGTGGGTTaGCTACAAATACACCATTTT +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDVPEVG*LQIHHF
Trigger: AAAATGGTGTATTTGTAGCCAACCCACTTCAGGAAC...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGTATTATACACCAAGCTaGAGGCTAGGATTTTTAAAG +
Preference number: 4 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTYYTPS*RLGFLK
Trigger: CTTTAAAAATCCTAGCCTCCAGCTTGGTGTATAATA...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTATGGCTTTACCTATGTaGCTCCTTGAGAGATCATTG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIMALPM*LLERSL
Trigger: CAATGATCTCTCAAGGAGCCACATAGGTAAAGCCAT...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACTGGTCTTCCCGCTTGTaGATAAATATCGAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNWSSRL*INIESL
Trigger: CAAGCTCTCGATATTTATCCACAAGCGGGAAGACCA...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACACAATTCTCTGAAGTTTaGCAAGTTTCCTGCCACTGC +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTQFSEV*QVSCHC
Trigger: GCAGTGGCAGGAAACTTGCCAAACTTCAGAGAATTG...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGCCAGCACTACATTCCTaGGCTACTAGGTTAAGAACT +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMPALHS*ATRLRT
Trigger: AGTTCTTAACCTAGTAGCCCAGGAATGTAGTGCTGG...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTCAAGAGCCAAAATACTaGCTTTTAGCTCCTTCAATG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRIQEPKY*LLAPSM
Trigger: CATTGAAGGAGCTAAAAGTCAGTATTTTGGCTCTTG...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377560.9
CDS-3UTR TCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGTTTTGTTTCAGAAGCTaGTTTACAAGCTGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREEFCFRS*FTSWCF
Trigger: GAAACACCAGCTTGTAAATCAGCTTCTGAAACAAAA...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGTATTTGAGCAGCATTTaGTTCAGGTGCCATGAGCAA +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMYLSSI*FRCHEQ
Trigger: TTGCTCATGGCACCTGAATCAAATGCTGCTCAAATA...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTAATTCACGTCCATGTTaGCTTTGGATTCGGAAATTG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRINSRPC*LWIRKL
Trigger: CAATTTCCGAATCCAAAGTCAACATGGACGTGAATT...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGAGCATCTATGAGATCTaGACGACTTGTAAACTGACC +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMSIYEI*TTCKLT
Trigger: GGTCAGTTTACAAGTCGTGCAGATCTCATAGATGCT...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACAGGTACGTTTCTACCTaGACCAGTTCATTCACTGAA +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNRYVST*TSSFTE
Trigger: TTCAGTGAATGAACTGGTGCAGGTAGAAACGTACCT...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CCA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATTGTTTCTGTAATAGATaGACTGTGTGGACGAAAGTT +
Preference number: 4 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDCFCNR*TVWTKV
Trigger: AACTTTCGTCCACACAGTCCATCTATTACAGAAACA...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTAATTTAAATACCACCTaGAAGACAACGAGAATGCAG +
Preference number: 4 (lower is better)
Translates to: FPKSYREEMDANGSISRINLNTT*KTTRMQ
Trigger: CTGCATTCTCGTTGTCTTTCAGGTGGTATTTAAATT...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGTATCAAAGAGACTCTaGTTTACTACAGACACGGTT +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMVSKRL*FTTDTV
Trigger: AACCGTGTCTGTAGTAAATCAGAGTCTCTTTGATAC...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR GCA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACATCGCACCAACGTGGTaGAATAATTGGTTTATAACC +
Preference number: 4 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNIAPTW*NNWFIT
Trigger: GGTTATAAACCAATTATTGCACCACGTTGGTGCGAT...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGTCATCAACTTCACTTTaGCATTTTTGTTCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: GILSIMVLDAFPKSYREESSTSL*HFCSSS
Trigger: AGAACTGGAACAAAAATGGCAAAGTGAAGTTGATGA...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR TCA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACATTTTGTTTCAGAAGCTaGTTTACAAGCTGGTGTTTC +
Preference number: 4 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTFCFRS*FTSWCF
Trigger: GAAACACCAGCTTGTAAATCAGCTTCTGAAACAAAA...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR GCA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAATTTATTAGAGACTaGAGTGCATCAACCAAGTTC +
Preference number: 4 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSKFIRD*SASTKF
Trigger: GAACTTGGTTGATGCACTGCAGTCTCTAATAAATTT...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CCA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGACAGGATTCTTAACATaGAACAAGCTAACACAGACA +
Preference number: 4 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMTGFLT*NKLTQT
Trigger: TGTCTGTGTTAGCTTGTTCCATGTTAAGAATCCTGT...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS GCA 90 bp CGGCCGCCGCGCCCGCCAGCGGCGCCCCACTTGCTGCCTCGCCCGTaGAACTCCGCCCTAGGCGGTCCGAGTCGCCATACCCCCGACCCC +
Preference number: 5 (lower is better)
Translates to: RPPRPPAAPHLLPRP*NSALGGPSRHTPDP
Trigger: GGGGTCGGGGGTATGGCGACTCGGACCGCCTAGGGCGGAGTTGCACGGGCGAGGCAGCAAGTGGGGCGCCGCTGGCGGGCGCGGCGGCCG
79% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000682272.1
CDS TCA 90 bp CCGCGGCCGCCGACGAGCCCATGGCCCCGGCTGAAGGCTTGGCGCTaGGGAGCAGACGCCCGGCCGGGGGAAACGGAGCAGGAGCCGCCG +
Preference number: 5 (lower is better)
Translates to: PRPPTSPWPRLKAWR*GADARPGETEQEPP
Trigger: CGGCGGCTCCTGCTCCGTTTCCCCCGGCCGGGCGTCTGCTCCTCAGCGCCAAGCCTTCAGCCGGGGCCATGGGCTCGTCGGCGGCCGCGG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000682272.1
CDS GCA 90 bp AGCCCGTCGTGCAGGAAGATGGTCTCTTCCTTCACCGAGAGCCACTaGGCCGAGTCAGCGGCCGCCGCCGCCGCCGCCGCCGCGGCCGCC +
Preference number: 5 (lower is better)
Translates to: SPSCRKMVSSFTESH*AESAAAAAAAAAAA
Trigger: GGCGGCCGCGGCGGCGGCGGCGGCGGCGGCCGCTGACTCGGCGCAGTGGCTCTCGGTGAAGGAAGAGACCATCTTCCTGCACGACGGGCT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000682272.1
CDS CCA 90 bp GGTGGGTGGGGATCCCGGAGATCACCAGCAAGCGGCTGTGGGCGGTaGGGCCCACCAGGGCCTGGCAGGCATCGGCGATGGCGTCACTCG +
Preference number: 5 (lower is better)
Translates to: GGWGSRRSPASGCGR*GPPGPGRHRRWRHS
Trigger: CGAGTGACGCCATCGCCGATGCCTGCCAGGCCCTGGTGGGCCCCACCGCCCACAGCCGCTTGCTGGTGATCTCCGGGATCCCCACCCACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp TCGTCCAGGTGGGTGGGGATCCCGGAGATCACCAGCAAGCGGCTGTaGGCGGTGGGGCCCACCAGGGCCTGGCAGGCATCGGCGATGGCG +
Preference number: 5 (lower is better)
Translates to: SSRWVGIPEITSKRL*AVGPTRAWQASAMA
Trigger: CGCCATCGCCGATGCCTGCCAGGCCCTGGTGGGCCCCACCGCCCACAGCCGCTTGCTGGTGATCTCCGGGATCCCCACCCACCTGGACGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp GAGATCACCAGCAAGCGGCTGTGGGCGGTGGGGCCCACCAGGGCCTaGCAGGCATCGGCGATGGCGTCACTCGTCACGCCCAGCCCCTGT +
Preference number: 5 (lower is better)
Translates to: EITSKRLWAVGPTRA*QASAMASLVTPSPC
Trigger: ACAGGGGCTGGGCGTGACGAGTGACGCCATCGCCGATGCCTGCCAGGCCCTGGTGGGCCCCACCGCCCACAGCCGCTTGCTGGTGATCTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp TTTCCTGGCTGGACACCGCGTGGGGCTCCAACAGGCCCGGAGGGATaGGCAGCTCGAGGCCGGCAGGCAGCGGATCCACAGAGAGGTCGC +
Preference number: 5 (lower is better)
Translates to: FPGWTPRGAPTGPEG*AARGRQAADPQRGR
Trigger: GCGACCTCTCTGTGGATCCGCTGCCTGCCGGCCTCGAGCTGCCCATCCCTCCGGGCCTGTTGGAGCCCCACGCGGTGTCCAGCCAGGAAA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS-3UTR CAA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCACGACTGCGAAGCCTTaGATGGGGCGGGCGGCGAGG +
Preference number: 5 (lower is better)
Translates to: RAAVVASQASRVGASVTATTAKP*MGRAAR
Trigger: CCTCGCCGCCCGCCCCATCAAAGGCTTCGCAGTCGT...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS TCA 90 bp CGCGGTGGAACCACAGCATGTCCTCGGGCTTGCTGCCTCCGATGCTaGGCACGGTGGGGTCCGAGTCCACGGTGCGGGAAGACTGGCGCT +
Preference number: 5 (lower is better)
Translates to: RGGTTACPRACCLRC*ARWGPSPRCGKTGA
Trigger: AGCGCCAGTCTTCCCGCACCGTGGACTCGGACCCCACCGTGCTCAGCATCGGAGGCAGCAAGCCCGAGGACATGCTGTGGTTCCACCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 90 bp TGGGCAGCTCGAGGCCGGCAGGCAGCGGATCCACAGAGAGGTCGCTaGCGGTTTGGGAGATGCCCTGCGAGCTGCAGATGGAGGCCTGGC +
Preference number: 5 (lower is better)
Translates to: WAARGRQAADPQRGR*RFGRCPASCRWRPG
Trigger: GCCAGGCCTCCATCTGCAGCTCGCAGGGCATCTCCCAAACCGTCAGCGACCTCTCTGTGGATCCGCTGCCTGCCGGCCTCGAGCTGCCCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 90 bp AGCCCTCCGCCCTCCAACATGAAGGAGACGAGCCTGGACACTCCCTaGGGACAGGGCGAGTGCCCAGAGCCTGGCTGGCCCGTGACTGGG +
Preference number: 5 (lower is better)
Translates to: SPPPSNMKETSLDTP*GQGECPEPGWPVTG
Trigger: CCCAGTCACGGGCCAGCCAGGCTCTGGGCACTCGCCCTGTCCTCAGGGAGTGTCCAGGCTCGTCTCCTTCATGTTGGAGGGCGGAGGGCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS TCA 90 bp GCAGCTTCTGCCGGGCCTCAGGCACGACGTCCACTCTCGTGGCCTTaGGGGGCGCTGGGTGGGACGTTGCCCTCCACACTCAGCCAGGAT +
Preference number: 5 (lower is better)
Translates to: AASAGPQARRPLSWP*GALGGTLPSTLSQD
Trigger: ATCCTGGCTGAGTGTGGAGGGCAACGTCCCACCCAGCGCCCCTCAAGGCCACGAGAGTGGACGTCGTGCCTGAGGCCCGGCAGAAGCTGC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS TCA 90 bp CTGCAGCAAGGCGAAGCGCAGGCGCAGGCTCTCGATGGGCACGTCTaGGGGCGCAGGAGCAGTCAGGCTGAGATCTCGGCCAGGTGGCTG +
Preference number: 5 (lower is better)
Translates to: LQQGEAQAQALDGHV*GRRSSQAEISARWL
Trigger: CAGCCACCTGGCCGAGATCTCAGCCTGACTGCTCCTGCGCCCTCAGACGTGCCCATCGAGAGCCTGCGCCTGCGCTTCGCCTTGCTGCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548588.2
ENST00000651701.1
CDS GCA 90 bp GGCAGCGGATCCACAGAGAGGTCGCTGACGGTTTGGGAGATGCCCTaGGAGCTGCAGATGGAGGCCTGGCTGGTGGAGGCGGAGGCGCTG +
Preference number: 5 (lower is better)
Translates to: GSGSTERSLTVWEMP*ELQMEAWLVEAEAL
Trigger: CAGCGCCTCCGCCTCCACCAGCCAGGCCTCCATCTGCAGCTCGCAGGGCATCTCCCAAACCGTCAGCGACCTCTCTGTGGATCCGCTGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp TTGCAGGCCTTGCGGATGGCGCCTCTGACTACGCCCTCGTCCAGGTaGGTGGGGATCCCGGAGATCACCAGCAAGCGGCTGTGGGCGGTG +
Preference number: 5 (lower is better)
Translates to: LQALRMAPLTTPSSR*VGIPEITSKRLWAV
Trigger: CACCGCCCACAGCCGCTTGCTGGTGATCTCCGGGATCCCCACCCACCTGGACGAGGGCGTAGTCAGAGGCGCCATCCGCAAGGCCTGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp GTGCTGCACAGGGAAATGTCCAGGCTTTCCTGGCTGGACACCGCGTaGGGCTCCAACAGGCCCGGAGGGATGGGCAGCTCGAGGCCGGCA +
Preference number: 5 (lower is better)
Translates to: VLHREMSRLSWLDTA*GSNRPGGMGSSRPA
Trigger: TGCCGGCCTCGAGCTGCCCATCCCTCCGGGCCTGTTGGAGCCCCACGCGGTGTCCAGCCAGGAAAGCCTGGACATTTCCCTGTGCAGCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp GCCACTCTGGGGTCAGCAGCATCCGCGGGGTCCAGGTACACCTCATaGGGATGGAGCCGTGCGGGTGTGATGGCGAGGTGGCGGCATAGC +
Preference number: 5 (lower is better)
Translates to: ATLGSAASAGSRYTS*GWSRAGVMARWRHS
Trigger: GCTATGCCGCCACCTCGCCATCACACCCGCACGGCTCCATCCCCATGAGGTGTACCTGGACCCCGCGGATGCTGCTGACCCCAGAGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548588.2
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp CCGGGCCTCAGGCACGACGTCCACTCTCGTGGCCTTGAGGGGCGCTaGGTGGGACGTTGCCCTCCACACTCAGCCAGGATGGCTCTCTCA +
Preference number: 5 (lower is better)
Translates to: PGLRHDVHSRGLEGR*VGRCPPHSARMALS
Trigger: TGAGAGAGCCATCCTGGCTGAGTGTGGAGGGCAACGTCCCACCCAGCGCCCCTCAAGGCCACGAGAGTGGACGTCGTGCCTGAGGCCCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS GCA 90 bp TCGCTGGGCAGCTCGGCCAGGTCGGTGACCCGGATCAGCCCGTCGTaGAGGAAGATGGTCTCTTCCTTCACCGAGAGCCACTGCGCCGAG +
Preference number: 5 (lower is better)
Translates to: SLGSSARSVTRISPS*RKMVSSFTESHCAE
Trigger: CTCGGCGCAGTGGCTCTCGGTGAAGGAAGAGACCATCTTCCTGCACGACGGGCTGATCCGGGTCACCGACCTGGCCGAGCTGCCCAGCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550724.2
ENST00000682272.1
CDS CCA 90 bp TCGAGGCCGGCAGGCAGCGGATCCACAGAGAGGTCGCTGACGGTTTaGGAGATGCCCTGCGAGCTGCAGATGGAGGCCTGGCTGGTGGAG +
Preference number: 5 (lower is better)
Translates to: SRPAGSGSTERSLTV*EMPCELQMEAWLVE
Trigger: CTCCACCAGCCAGGCCTCCATCTGCAGCTCGCAGGGCATCTCCCAAACCGTCAGCGACCTCTCTGTGGATCCGCTGCCTGCCGGCCTCGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp GCCTCAGGCACGACGTCCACTCTCGTGGCCTTGAGGGGCGCTGGGTaGGACGTTGCCCTCCACACTCAGCCAGGATGGCTCTCTCAGCTG +
Preference number: 5 (lower is better)
Translates to: ASGTTSTLVALRGAG*DVALHTQPGWLSQL
Trigger: CAGCTGAGAGAGCCATCCTGGCTGAGTGTGGAGGGCAACGTCCCACCCAGCGCCCCTCAAGGCCACGAGAGTGGACGTCGTGCCTGAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS CCA 90 bp TTCCTGGCGGGGCTGCCCAAGGACGCTGCCCGTGGATTCTGGCCCTaGTGTCTTGCAGGTCACCTCTCTCTTCCTGCAGGGCCAGGGCAG +
Preference number: 5 (lower is better)
Translates to: FLAGLPKDAARGFWP*CLAGHLSLPAGPGQ
Trigger: CTGCCCTGGCCCTGCAGGAAGAGAGAGGTGACCTGCAAGACACCAGGGCCAGAATCCACGGGCAGCGTCCTTGGGCAGCCCCGCCAGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CAA 90 bp TTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCCACCTCCTCGCGCTTCCTGCAGGTCTaGCTCAGGGTCCAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: FSHATRMCRPRLHSSTSSRFLQV*LRVQGL
Trigger: GAGCCCTTGGACCCTGAGCAAGACCTGCAGGAAGCG...CGAGGAGGTGGAGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS TCA 90 bp TGCGTGGCGTACGCATGCCCTGGACAGGCAGGAAGGGCTCCATCCTaGTGCCTCCCCCTTGGTGGACCTCAGGTGGTCCCAGGGCTGACT +
Preference number: 5 (lower is better)
Translates to: CVAYACPGQAGRAPS*CLPLGGPQVVPGLT
Trigger: AGTCAGCCCTGGGACCACCTGAGGTCCACCAAGGGGGAGGCATCAGGATGGAGCCCTTCCTGCCTGTCCAGGGCATGCGTACGCCACGCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS GCA 90 bp CACGACGTCCACTCTCGTGGCCTTGAGGGGCGCTGGGTGGGACGTTaGCCTCCACACTCAGCCAGGATGGCTCTCTCAGCTGTAGGGCAC +
Preference number: 5 (lower is better)
Translates to: HDVHSRGLEGRWVGR*PPHSARMALSAVGH
Trigger: GTGCCCTACAGCTGAGAGAGCCATCCTGGCTGAGTGTGGAGGGCAACGTCCCACCCAGCGCCCCTCAAGGCCACGAGAGTGGACGTCGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS CCA 90 bp GTGGGGTGGCATCTTCCTGGCGGGGCTGCCCAAGGACGCTGCCCGTaGATTCTGGCCCTGGTGTCTTGCAGGTCACCTCTCTCTTCCTGC +
Preference number: 5 (lower is better)
Translates to: VGWHLPGGAAQGRCP*ILALVSCRSPLSSC
Trigger: GCAGGAAGAGAGAGGTGACCTGCAAGACACCAGGGCCAGAATCCACGGGCAGCGTCCTTGGGCAGCCCCGCCAGGAAGATGCCACCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS TCA 90 bp GGCAGGGTCACTTCGGCCACAGCCAGGCACCCTTCCATGAGTGCATaGAAATACGTAGAGAACCTGCCCTGGTCACCGGCCGCCGCCCCC +
Preference number: 5 (lower is better)
Translates to: GRVTSATARHPSMSA*KYVENLPWSPAAAP
Trigger: GGGGGCGGCGGCCGGTGACCAGGGCAGGTTCTCTACGTATTTTCATGCACTCATGGAAGGGTGCCTGGCTGTGGCCGAAGTGACCCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 90 bp CCAGAGACCTGGCCAGGCAGTGCCTCAGTCGGCCATGGAGTATTCTaGCGGCATAGGCAGAAGCCGCTGGCACCTCCTTCACCTGAGGCC +
Preference number: 5 (lower is better)
Translates to: PETWPGSASVGHGVF*RHRQKPLAPPSPEA
Trigger: GGCCTCAGGTGAAGGAGGTGCCAGCGGCTTCTGCCTATGCCGGCAGAATACTCCATGGCCGACTGAGGCACTGCCTGGCCAGGTCTCTGG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS GCA 90 bp GCAGGTGCAGGCACTGACCTTTGGCCTCCTTCAGCAGGGCGGCGATaGTGTGGGTATACATGGGTGTCTGGCGCAGCTCCACCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: AGAGTDLWPPSAGRR*CGYTWVSGAAPPGA
Trigger: TGCCCCTGGTGGAGCTGCGCCAGACACCCATGTATACCCACAGCATCGCCGCCCTGCTGAAGGAGGCCAAAGGTCAGTGCCTGCACCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS CCA 90 bp CCGATGCTGAGCACGGTGGGGTCCGAGTCCACGGTGCGGGAAGACTaGCGCTTGCCCGACGAGGAGGCCTTTTCCCGCTTCATCTTGACT +
Preference number: 5 (lower is better)
Translates to: PMLSTVGSESTVRED*RLPDEEAFSRFILT
Trigger: AGTCAAGATGAAGCGGGAAAAGGCCTCCTCGTCGGGCAAGCGCCAGTCTTCCCGCACCGTGGACTCGGACCCCACCGTGCTCAGCATCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS-3UTR CAA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTTGCACCAGTGCCTGCTaGCGAGTGTTTCCCCGCCGC +
Preference number: 5 (lower is better)
Translates to: AGHRLVCGGALLKARALCCTSAC*RVFPRR
Trigger: GCGGCGGGGAAACACTCGCAAGCAGGCACTGGTGCA...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CAGGGGCAGGTGAACGGGATGCGCTCCTGGTTGCAGGCAAACTTGATGAACTTGACCCCGCCGTGGGCGTaGCAGGCCTTGCGGATGGCG +
Preference number: 5 (lower is better)
Translates to: QGQVNGMRSWLQANLMNLTPPWA*QALRMA
Trigger: CGCCATCCGCAAGGCCTGCAACGCCCACGGCGGGGT...CAAGTTCATCAAGTTTGCCTGCAACCAGGAGCGCATCCCGTTCACCTGCCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CAA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTGAGGCCGTCTCTGCATaGTCCAGGGGCTCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFEAVSA*SRGSPR
Trigger: CCTGGGGGAGCCCCTGGACAATGCAGAGACGGCCTC...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS TCA 90 bp CAGTGTTGGCTGGGGACGCGTCCCGCGGGTAACAGGCGGCCTCGATaGGGTTCAGCTGGCCATTTCGCTTCACTTTGTGGCCGAGGCCAT +
Preference number: 5 (lower is better)
Translates to: QCWLGTRPAGNRRPR*GSAGHFASLCGRGH
Trigger: ATGGCCTCGGCCACAAAGTGAAGCGAAATGGCCAGCTGAACCTCATCGAGGCCGCCTGTTACCCGCGGGACGCGTCCCCAGCCAACACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 90 bp CCCGACTCGTACGGCAGCTGTCAGCAATTCCCGCATGTGCACCAGTaGCTGCTTGCGAGTGTTTCCCCGCCGCCACCTTGTCTGTGCAGC +
Preference number: 5 (lower is better)
Translates to: PDSYGSCQQFPHVHQ*LLASVSPPPPCLCS
Trigger: GCTGCACAGACAAGGTGGCGGCGGGGAAACACTCGCAAGCAGGCACTGGTGCACATGCGGGAATTGCTGACAGCTGCCGTACGAGTCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp GTCACTCCCCCGACTCGTACGGCAGCTGTCAGCAATTCCCGCATGTaGACCAGTGCCTGCTTGCGAGTGTTTCCCCGCCGCCACCTTGTC +
Preference number: 5 (lower is better)
Translates to: VTPPTRTAAVSNSRM*TSACLRVFPRRHLV
Trigger: GACAAGGTGGCGGCGGGGAAACACTCGCAAGCAGGCACTGGTGCACATGCGGGAATTGCTGACAGCTGCCGTACGAGTCGGGGGAGTGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp TCCACCAGGGGCAGGAAGAAGGTCTCCAGTGTGGTGTTGAGGGACTaGAGCAAGGCGAAGCGCAGGCGCAGGCTCTCGATGGGCACGTTC +
Preference number: 5 (lower is better)
Translates to: STRGRKKVSSVVLRD*SKAKRRRRLSMGTF
Trigger: GAACGTGCCCATCGAGAGCCTGCGCCTGCGCTTCGCCTTGCTGCAGTCCCTCAACACCACACTGGAGACCTTCTTCCTGCCCCTGGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp TCCACCAGGGGCAGGAAGAAGGTCTCCAGTGTGGTGTTGAGGGACTaGAGCAAGGCGAAGCGCAGGCGCAGGCTCTCGATGGGCACGTCT +
Preference number: 5 (lower is better)
Translates to: STRGRKKVSSVVLRD*SKAKRRRRLSMGTS
Trigger: AGACGTGCCCATCGAGAGCCTGCGCCTGCGCTTCGCCTTGCTGCAGTCCCTCAACACCACACTGGAGACCTTCTTCCTGCCCCTGGTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548588.2
ENST00000651701.1
CDS CCA 90 bp GCTGCCCTGAGTGACCCAGGGGGACAATGGCAGAGACCAGAGACCTaGCCAGGCAGTGCCTCAGTCGGCCATGGAGTATTCTGCCGGCAT +
Preference number: 5 (lower is better)
Translates to: AALSDPGGQWQRPET*PGSASVGHGVFCRH
Trigger: ATGCCGGCAGAATACTCCATGGCCGACTGAGGCACTGCCTGGCCAGGTCTCTGGTCTCTGCCATTGTCCCCCTGGGTCACTCAGGGCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS-3UTR CAA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTTGCACCAGTGCCTGCTaGCGAGTGTTTCCCCGCCGC +
Preference number: 5 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSCTSAC*RVFPRR
Trigger: GCGGCGGGGAAACACTCGCAAGCAGGCACTGGTGCA...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AGCGGGACGTCTGCCCGAATTGCAATCCCCAGCAGCTGCCCCAGGAAGTGCAGCTTCGGGGCGAAGATATaGAGCAGGGCCATGCGGCAG +
Preference number: 5 (lower is better)
Translates to: SGTSARIAIPSSCPRKCSFGAKI*SRAMRQ
Trigger: CTGCCGCATGGCCCTGCTCAATATCTTCGCCCCGAA...GCTGCACTTCCTGGGGCAGCTGCTGGGGATTGCAATTCGGGCAGACGTCCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CAA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCTGCAGCAGGGCTTGTaGGGGCTGTCAGGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWLQQGL*GLSGLS
Trigger: GGAGAGCCCTGACAGCCCCAACAAGCCCTGCTGCAG...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTGTGTGGCCGAGGTCATaGTACCCCCGGCTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: AGHRLVCGGALLKARALCVWPRS*YPRLPA
Trigger: AGCAGGAAGCCGGGGGTACAATGACCTCGGCCACAC...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCCACGTGTTTGGGCAATaGGCCCAGCCACCTCTATGT +
Preference number: 5 (lower is better)
Translates to: RAAVVASQASRVGASVTAHVFGQ*AQPPLC
Trigger: ACATAGAGGTGGCTGGGCCAATTGCCCAAACACGTG...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS GCA 90 bp CACTCTGTGGCTCGGGCAAGATGGTTAGTGAGAAGGCTGGACACCTaGCGGGCCAGACCTGAGTGCACAGCCTCTGTGGAGCCACCTTCC +
Preference number: 5 (lower is better)
Translates to: HSVARARWLVRRLDT*RARPECTASVEPPS
Trigger: GGAAGGTGGCTCCACAGAGGCTGTGCACTCAGGTCTGGCCCGGCAGGTGTCCAGCCTTCTCACTAACCATCTTGCCCGAGCCACAGAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp AGCAGCAGCAGCGACAGCGAGGAACTCTGCAGCTCCTTACACACCTaGCACAGGAAGTGGCGGAAAGAGCCGCTGGTGCCATGGACCTCC +
Preference number: 5 (lower is better)
Translates to: SSSSDSEELCSSLHT*HRKWRKEPLVPWTS
Trigger: GGAGGTCCATGGCACCAGCGGCTCTTTCCGCCACTTCCTGTGGCAGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCTGCTGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547085.1
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp TTCCCAGCAGCCTGGTTGCCACAGCACTCTGTGGCTCGGGCAAGATaGTTAGTGAGAAGGCTGGACACCTGCCGGGCCAGACCTGAGTGC +
Preference number: 5 (lower is better)
Translates to: FPAAWLPQHSVARAR*LVRRLDTCRARPEC
Trigger: GCACTCAGGTCTGGCCCGGCAGGTGTCCAGCCTTCTCACTAACCATCTTGCCCGAGCCACAGAGTGCTGTGGCAACCAGGCTGCTGGGAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp CTCTGCTCCAGGGTGTGCACCGTGCGCAGGAGCTCTGCCAGGAGATaGAAAACAAGCTCCTTCACGCAGGCTGCCATGTCCGTGGTCCAC +
Preference number: 5 (lower is better)
Translates to: LCSRVCTVRRSSARR*KTSSFTQAAMSVVH
Trigger: GTGGACCACGGACATGGCAGCCTGCGTGAAGGAGCTTGTTTTCCATCTCCTGGCAGAGCTCCTGCGCACGGTGCACACCCTGGAGCAGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp ATCTCCACGACTGCGAAGCCTTTGATGGGGCGGGCGGCGAGGGGCTaGTTGTCCAGGGAAGTGACTGTGTACATGGAGCCCATGTCCGAC +
Preference number: 5 (lower is better)
Translates to: ISTTAKPLMGRAARG*LSREVTVYMEPMSD
Trigger: GTCGGACATGGGCTCCATGTACACAGTCACTTCCCTGGACAACCAGCCCCTCGCCGCCCGCCCCATCAAAGGCTTCGCAGTCGTGGAGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp TGGGGATGGAGCCGTGCGGGTGTGATGGCGAGGTGGCGGCATAGCTaGTTGATGTACTGCACAAGTGCCACGTCCATCTCCAGGGTCCAC +
Preference number: 5 (lower is better)
Translates to: WGWSRAGVMARWRHS*LMYCTSATSISRVH
Trigger: GTGGACCCTGGAGATGGACGTGGCACTTGTGCAGTACATCAACCAGCTATGCCGCCACCTCGCCATCACACCCGCACGGCTCCATCCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548588.2
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS-3UTR CAA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTCTTTGGAGACGGGCGTaGGTCAAGCAGCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: PHSKELWPLGRQRADHLLLWRRA*VKQQGE
Trigger: CTCTCCCTGCTGCTTGACCAACGCCCGTCTCCAAAG...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCCCATTTCGCTTCACTTaGTGGCCGAGGCCATATACG +
Preference number: 5 (lower is better)
Translates to: RAAVVASQASRVGASVTAPFRFT*WPRPYT
Trigger: CGTATATGGCCTCGGCCACAAAGTGAAGCGAAATGG...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTAGCATGTCCTCGGGCTaGCTGCCTCCGATGCTGAGC +
Preference number: 5 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSSMSSG*LPPMLS
Trigger: GCTCAGCATCGGAGGCAGCAAGCCCGAGGACATGCT...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACACGACTGCGAAGCCTTaGATGGGGCGGGCGGCGAGG +
Preference number: 5 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDTTAKP*MGRAAR
Trigger: CCTCGCCGCCCGCCCCATCAAAGGCTTCGCAGTCGT...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTAGCACAGCCTTGTCCTaGGCGGGCGGCTTGGTGATA +
Preference number: 5 (lower is better)
Translates to: AGHRLVCGGALLKARALCSTALS*AGGLVI
Trigger: TATCACCAAGCCGCCCGCCAAGGACAAGGCTGTGCT...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CCAGGTGCTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATCTCCATCAGCCCCACTaGGTACATGGTGTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: PGAGRRSQRTGPPARSHHLHQPH*VHGVGL
Trigger: AAGGCCCACACCATGTACCAAGTGGGGCTGATGGAG...ATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAGCACCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS TCA 90 bp GCTTCTTGGTGTCTTCTTCCTGCAGCGGGATGTAGATCTCGTCTTTaGAGACCCCGCCGTGGGCGTTGCAGGCCTTGCGGATGGCGCCTC +
Preference number: 5 (lower is better)
Translates to: ASWCLLPAAGCRSRL*RPRRGRCRPCGWRL
Trigger: GAGGCGCCATCCGCAAGGCCTGCAACGCCCACGGCGGGGTCTTCAAAGACGAGATCTACATCCCGCTGCAGGAAGAAGACACCAAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 90 bp GGCATCCGGGACTCTGGCTCTGCTATTGTCTTGCAATGGCTGCCCTaGGTGACCCAGGGGGACAATGGCAGAGACCAGAGACCTGGCCAG +
Preference number: 5 (lower is better)
Translates to: GIRDSGSAIVLQWLP*VTQGDNGRDQRPGQ
Trigger: CTGGCCAGGTCTCTGGTCTCTGCCATTGTCCCCCTGGGTCACTCAGGGCAGCCATTGCAAGACAATAGCAGAGCCAGAGTCCCGGATGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS GCA 90 bp AGGGGGAAGACCAGCAGGAGCCCCATCCTCGATGTGAAGGGCGCTTaGTCAGGTTGCTGCAACAAGCCCTGGCGTTTGAGCAGGGCCAAA +
Preference number: 5 (lower is better)
Translates to: RGKTSRSPILDVKGA*SGCCNKPWRLSRAK
Trigger: TTTGGCCCTGCTCAAACGCCAGGGCTTGTTGCAGCAACCTGAGCAAGCGCCCTTCACATCGAGGATGGGGCTCCTGCTGGTCTTCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp GGCCACATGCCACCAGAGACGTCTTCAAGATATGGTGAGAGGCGCTaGCCGCAGTATGTGAAGTACACCCGGCCCTTGGCTGGCTGTCCC +
Preference number: 5 (lower is better)
Translates to: GHMPPETSSRYGERR*PQYVKYTRPLAGCP
Trigger: GGGACAGCCAGCCAAGGGCCGGGTGTACTTCACATACTGCGGGCAGCGCCTCTCACCATATCTTGAAGACGTCTCTGGTGGCATGTGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 90 bp AGTAGGCAGGGTCACTTCGGCCACAGCCAGGCACCCTTCCATGAGTaGATGAAAATACGTAGAGAACCTGCCCTGGTCACCGGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: SRQGHFGHSQAPFHE*MKIRREPALVTGRR
Trigger: GCGGCGGCCGGTGACCAGGGCAGGTTCTCTACGTATTTTCATGCACTCATGGAAGGGTGCCTGGCTGTGGCCGAAGTGACCCTGCCTACT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp CAGGCGGCCTCGATGAGGTTCAGCTGGCCATTTCGCTTCACTTTGTaGCCGAGGCCATATACGAGCACCCGTGCCCACGGTGCCTTGTAC +
Preference number: 5 (lower is better)
Translates to: QAASMRFSWPFRFTL*PRPYTSTRAHGALY
Trigger: GTACAAGGCACCGTGGGCACGGGTGCTCGTATATGGCCTCGGCCACAAAGTGAAGCGAAATGGCCAGCTGAACCTCATCGAGGCCGCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp AACAGCACCATGCTGTCAACATCTGTGCGTGGCGTACGCATGCCCTaGACAGGCAGGAAGGGCTCCATCCTGATGCCTCCCCCTTGGTGG +
Preference number: 5 (lower is better)
Translates to: NSTMLSTSVRGVRMP*TGRKGSILMPPPWW
Trigger: CCACCAAGGGGGAGGCATCAGGATGGAGCCCTTCCTGCCTGTCCAGGGCATGCGTACGCCACGCACAGATGTTGACAGCATGGTGCTGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS-3UTR CAA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCGCCAAATCGGTTGTTTaGGAGCTGTTCAGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: RAAVVASQASRVGASVTAAKSVV*ELFSQV
Trigger: AACCTGGCTGAACAGCTCCAAAACAACCGATTTGGC...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCCCATATCCCAGTGTGTaGCCTCCATATTCAGCAACC +
Preference number: 5 (lower is better)
Translates to: RAAVVASQASRVGASVTAPYPSV*PPYSAT
Trigger: GGTTGCTGAATATGGAGGCAACACACTGGGATATGG...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTCAGTCAGCAGGCTCCTaGGTCAAGCTCAAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: PHSKELWPLGRQRADHLLQSAGS*VKLKGW
Trigger: CCAGCCTTTGAGCTTGACCAAGGAGCCTGCTGACTG...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTTTCCCCGCCGCCACCTaGTCTGTGCAGCCAAAAGGA +
Preference number: 5 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFFPAAT*SVQPKG
Trigger: TCCTTTTGGCTGCACAGACAAGGTGGCGGCGGGGAA...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTCACTCAACACAGCGGTaGGCAAGCACCTGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: PHSKELWPLGRQRADHLLHSTQR*ASTWKA
Trigger: TGCCTTCCAGGTGCTTGCCAACCGCTGTGTTGAGTG...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTCGGGTGATGGCCACGTaGAGCCACTCTCTCACTGTC +
Preference number: 5 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSRVMAT*SHSLTV
Trigger: GACAGTGAGAGAGTGGCTCAACGTGGCCATCACCCG...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTCGTGCCCACGGTGCCTaGTACAGAGAGGAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: AGHRLVCGGALLKARALCRAHGA*YREESL
Trigger: CAAAGACTCCTCTCTGTACAAGGCACCGTGGGCACG...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACCGGGAAGACTGGCGCTaGCCCGACGAGGAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDREDWR*PDEEAF
Trigger: AAAGGCCTCCTCGTCGGGCAAGCGCCAGTCTTCCCG...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTACCCCGCCGTGGGCGTaGCAGGCCTTGCGGATGGCG +
Preference number: 5 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFTPPWA*QALRMA
Trigger: CGCCATCCGCAAGGCCTGCAACGCCCACGGCGGGGT...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAGCGGCGAGGGGCTGGTaGTCCAGGGAAGTGACTGTG +
Preference number: 5 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLAARGW*SREVTV
Trigger: CACAGTCACTTCCCTGGACAACCAGCCCCTCGCCGC...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AGCGGGACGTCTGCCCGAATTGCAATCCCCAGCAGCTGCCCCAGGAAGTGCAGCCCGGCCTTGCTGTACTaGCTCTTGTCAAACTTGGGC +
Preference number: 5 (lower is better)
Translates to: SGTSARIAIPSSCPRKCSPALLY*LLSNLG
Trigger: GCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCGG...GCTGCACTTCCTGGGGCAGCTGCTGGGGATTGCAATTCGGGCAGACGTCCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CAA 90 bp TGGGGCACAGCAGCAGCAGCGACAGCGAGGAACTCTGCAGCTCCTTACACACCTAGCACAGCCTTGTCCTaGGCGGGCGGCTTGGTGATA +
Preference number: 5 (lower is better)
Translates to: WGTAAAATARNSAAPYTPSTALS*AGGLVI
Trigger: TATCACCAAGCCGCCCGCCAAGGACAAGGCTGTGCT...AGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCTGCTGCTGCTGTGCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS TCA 90 bp CCTGGAAGGCCAGGGGCCTGGACCCTGGAACCCCAGCTGGCTGCATaGCCTTGGGAAGTGACTTGGCTTTGTAGAGTCCCAGTTTCCCTA +
Preference number: 5 (lower is better)
Translates to: PGRPGAWTLEPQLAA*PWEVTWLCRVPVSL
Trigger: TAGGGAAACTGGGACTCTACAAAGCCAAGTCACTTCCCAAGGTCATGCAGCCAGCTGGGGTTCCAGGGTCCAGGCCCCTGGCCTTCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS GCA 90 bp GTACGGCAGCTGTCAGCAATTCCCGCATGTGCACCAGTGCCTGCTTaGGAGTGTTTCCCCGCCGCCACCTTGTCTGTGCAGCCAAAAGGA +
Preference number: 5 (lower is better)
Translates to: VRQLSAIPACAPVPA*ECFPAATLSVQPKG
Trigger: TCCTTTTGGCTGCACAGACAAGGTGGCGGCGGGGAAACACTCGCAAGCAGGCACTGGTGCACATGCGGGAATTGCTGACAGCTGCCGTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp ACTCGTACGGCAGCTGTCAGCAATTCCCGCATGTGCACCAGTGCCTaGTTGCGAGTGTTTCCCCGCCGCCACCTTGTCTGTGCAGCCAAA +
Preference number: 5 (lower is better)
Translates to: TRTAAVSNSRMCTSA*LRVFPRRHLVCAAK
Trigger: TTTGGCTGCACAGACAAGGTGGCGGCGGGGAAACACTCGCAAGCAGGCACTGGTGCACATGCGGGAATTGCTGACAGCTGCCGTACGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp GCTGAGCGGTGGCCACGGCAGCAATCCGGCATGGTGGCCCATGAGTaGCTGGGTCTGATGCAATACTGGTGCCAGCATCATTGTCACTGT +
Preference number: 5 (lower is better)
Translates to: AERWPRQQSGMVAHE*LGLMQYWCQHHCHC
Trigger: ACAGTGACAATGATGCTGGCACCAGTATTGCATCAGACCCAGGCACTCATGGGCCACCATGCCGGATTGCTGCCGTGGCCACCGCTCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 90 bp GGCTTGGTGATAGGCCGCTTGGTGCTCACCACCTTCACGGGGTGCTaGTCCTTCCCGGCCTTGCTGTACTTGCTCTTGTCAAACTTGGGC +
Preference number: 5 (lower is better)
Translates to: GLVIGRLVLTTFTGC*SFPALLYLLLSNLG
Trigger: GCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGCAGCACCCCGTGAAGGTGGTGAGCACCAAGCGGCCTATCACCAAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 90 bp GGCGGCTTGGTGATAGGCCGCTTGGTGCTCACCACCTTCACGGGGTaGTGCTCCTTCCCGGCCTTGCTGTACTTGCTCTTGTCAAACTTG +
Preference number: 5 (lower is better)
Translates to: GGLVIGRLVLTTFTG*CSFPALLYLLLSNL
Trigger: CAAGTTTGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGCAGCACCCCGTGAAGGTGGTGAGCACCAAGCGGCCTATCACCAAGCCGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 90 bp CGTGCGGGTGTGATGGCGAGGTGGCGGCATAGCTGGTTGATGTACTaGACAAGTGCCACGTCCATCTCCAGGGTCCACTTTCTTGAGGCC +
Preference number: 5 (lower is better)
Translates to: RAGVMARWRHSWLMY*TSATSISRVHFLEA
Trigger: GGCCTCAAGAAAGTGGACCCTGGAGATGGACGTGGCACTTGTGCAGTACATCAACCAGCTATGCCGCCACCTCGCCATCACACCCGCACG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548588.2
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 90 bp TGTCATAGAAGATCAGCCCTTTGGCCTCCTTCAGCAGGGCGGCGATaGTGTGGGTATACATGGGTGTCTGGCGCAGCTCCACCAGGGGCA +
Preference number: 5 (lower is better)
Translates to: CHRRSALWPPSAGRR*CGYTWVSGAAPPGA
Trigger: TGCCCCTGGTGGAGCTGCGCCAGACACCCATGTATACCCACAGCATCGCCGCCCTGCTGAAGGAGGCCAAAGGGCTGATCTTCTATGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 90 bp AGTGGGTCCAAGGTGATCTCAGGGGCCGCGTGGTCCGCTGTCCTCTaGACAGTGGCATTCAGCACTCGATTCATCACGGTCACCTTCGTG +
Preference number: 5 (lower is better)
Translates to: SGSKVISGAAWSAVL*TVAFSTRFITVTFV
Trigger: CACGAAGGTGACCGTGATGAATCGAGTGCTGAATGCCACTGTGCAGAGGACAGCGGACCACGCGGCCCCTGAGATCACCTTGGACCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 90 bp GGGCGCAGGAGCAGTCAGGCTGAGATCTCGGCCAGGTGGCTGAGATaGCTGACTCACAGGCAACACAGGCAACCCTATCATCAGGAGACA +
Preference number: 5 (lower is better)
Translates to: GRRSSQAEISARWLR*LTHRQHRQPYHQET
Trigger: TGTCTCCTGATGATAGGGTTGCCTGTGTTGCCTGTGAGTCAGGCATCTCAGCCACCTGGCCGAGATCTCAGCCTGACTGCTCCTGCGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548588.2
ENST00000651701.1
CDS CCA 90 bp GGTGTTTCAGCAGGGGTCCCAGAGATGCTTCTCGTGAGGCCCGACTaGGCTGCGATGGTGACATGCAGCAACAGCTCGGCTCGGTTCATT +
Preference number: 5 (lower is better)
Translates to: GVSAGVPEMLLVRPD*AAMVTCSNSSARFI
Trigger: AATGAACCGAGCCGAGCTGTTGCTGCATGTCACCATCGCAGCCCAGTCGGGCCTCACGAGAAGCATCTCTGGGACCCCTGCTGAAACACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp CCAAGTAATCTCTTTGGGCTGTCTTCGGTCAGCCTGCAAAGGAGGTaGTGGGGGCCGAGCACAGTCCCGGTAGAGCATCCTCAGCCGTTC +
Preference number: 5 (lower is better)
Translates to: PSNLFGLSSVSLQRR*WGPSTVPVEHPQPF
Trigger: GAACGGCTGAGGATGCTCTACCGGGACTGTGCTCGGCCCCCACCACCTCCTTTGCAGGCTGACCGAAGACAGCCCAAAGAGATTACTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000552437.1
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp AGGTACACCTCATGGGGATGGAGCCGTGCGGGTGTGATGGCGAGGTaGCGGCATAGCTGGTTGATGTACTGCACAAGTGCCACGTCCATC +
Preference number: 5 (lower is better)
Translates to: RYTSWGWSRAGVMAR*RHSWLMYCTSATSI
Trigger: GATGGACGTGGCACTTGTGCAGTACATCAACCAGCTATGCCGCCACCTCGCCATCACACCCGCACGGCTCCATCCCCATGAGGTGTACCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548588.2
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp GAGGCCAGAGGCCTCTGTCCCCATGAAATAAGCCTTCCTGGCACATaGCTCACACCCCTAAGGTCCTCTGTGGGATCCCAACCCAGCCTC +
Preference number: 5 (lower is better)
Translates to: EARGLCPHEISLPGT*LTPLRSSVGSQPSL
Trigger: GAGGCTGGGTTGGGATCCCACAGAGGACCTTAGGGGTGTGAGCCATGTGCCAGGAAGGCTTATTTCATGGGGACAGAGGCCTCTGGCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS-3UTR CAA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCGCCCCGGCTGAAGGCTaGGCGCTGAGGAGCAGACGC +
Preference number: 5 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSAPAEG*ALRSRR
Trigger: GCGTCTGCTCCTCAGCGCCAAGCCTTCAGCCGGGGC...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377560.9
CDS-3UTR CAA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGACAGCTTGGTCAGGGTaGGTGCCGATGAAAGCAAAC +
Preference number: 5 (lower is better)
Translates to: GWPQACLWRRSAESTSALTAWSG*VPMKAN
Trigger: GTTTGCTTTCATCGGCACCAACCCTGACCAAGCTGT...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTAGCAGGGAGAGGAGTTaGGACACACAAGCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSSRERS*DTQAGW
Trigger: CCAGCCAGCTTGTGTGTCCAAACTCCTCTCCCTGCT...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTGCACAGGATCAGTCCTaGCAAGCTCCGAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: AGHRLVCGGALLKARALCAQDQS*QAPSSS
Trigger: AGAGGAACTCGGAGCTTGCAAGGACTGATCCTGTGC...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CCAGGTGCTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATCTGGTGCCAGCATCATaGTCACTGTCAGATGCCATG +
Preference number: 5 (lower is better)
Translates to: PGAGRRSQRTGPPARSHHLVPAS*SLSDAM
Trigger: CATGGCATCTGACAGTGACAATGATGCTGGCACCAG...ATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAGCACCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CAA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTGTCACTATCATATTGTaGCTGAGCGGTGGCCACGGC +
Preference number: 5 (lower is better)
Translates to: PHSKELWPLGRQRADHLLVTIIL*LSGGHG
Trigger: GCCGTGGCCACCGCTCAGCAACAATATGATAGTGAC...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTGGTGCAAGCCCAGTGTaGGCTGGGGACGCGTCCCGC +
Preference number: 5 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTGASPV*AGDASR
Trigger: GCGGGACGCGTCCCCAGCCAACACTGGGCTTGCACC...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGGGGCACAGCAGCAGCAGCGACAGCGAGGAACTCTGCAGCTCCTTACACACCTGGAGACACCCCCAGTTaGATGTGGACCCTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: WGTAAAATARNSAAPYTPGDTPS*MWTLSV
Trigger: CACAGACAGGGTCCACATCAAACTGGGGGTGTCTCC...AGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCTGCTGCTGCTGTGCCCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CAA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGAGGTCGCTGACGGTTaGGGAGATGCCCTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDEVADG*GDALRA
Trigger: AGCTCGCAGGGCATCTCCCAAACCGTCAGCGACCTC...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTTGCTCCTTCCCGGCCTaGCTGTACTTGCTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSCSFPA*LYLLLS
Trigger: TGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGCA...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGTTGGTGATAGGCCGCTaGGTGCTCACCACCTTCACG +
Preference number: 5 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWLVIGR*VLTTFT
Trigger: CGTGAAGGTGGTGAGCACCAAGCGGCCTATCACCAA...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGGGGCACAGCAGCAGCAGCGACAGCGAGGAACTCTGCAGCTCCTTACACACCTTTGGTGATAGGCCGCTaGGTGCTCACCACCTTCACG +
Preference number: 5 (lower is better)
Translates to: WGTAAAATARNSAAPYTPLVIGR*VLTTFT
Trigger: CGTGAAGGTGGTGAGCACCAAGCGGCCTATCACCAA...AGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCTGCTGCTGCTGTGCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CAA 90 bp CTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATTGATGCTGTCCTGCTGACGCTGTaGAGCACAGCCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: LGGDLSAQGLQLGLIIDAVLLTL*STALSL
Trigger: CAAGGACAAGGCTGTGCTCAACAGCGTCAGCAGGAC...AGCATCAATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CAA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTGGGATGCGCTCCTGGTaGCAGGCAAACTTGATGAAC +
Preference number: 5 (lower is better)
Translates to: PHSKELWPLGRQRADHLLGMRSW*QANLMN
Trigger: GTTCATCAAGTTTGCCTGCAACCAGGAGCGCATCCC...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAGTGTGGCCGAGGTCATaGTACCCCCGGCTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLVWPRS*YPRLPA
Trigger: AGCAGGAAGCCGGGGGTACAATGACCTCGGCCACAC...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS TCA 90 bp GGCAAGATGGTTAGTGAGAAGGCTGGACACCTGCCGGGCCAGACCTaGGTGCACAGCCTCTGTGGAGCCACCTTCCTCTTTTTCCCACTC +
Preference number: 5 (lower is better)
Translates to: GKMVSEKAGHLPGQT*VHSLCGATFLFFPL
Trigger: GAGTGGGAAAAAGAGGAAGGTGGCTCCACAGAGGCTGTGCACTCAGGTCTGGCCCGGCAGGTGTCCAGCCTTCTCACTAACCATCTTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 90 bp GTGAACCACTGGCCACATGCCACCAGAGACGTCTTCAAGATATGGTaGGAGGCGCTGCCCGCAGTATGTGAAGTACACCCGGCCCTTGGC +
Preference number: 5 (lower is better)
Translates to: VNHWPHATRDVFKIW*EALPAVCEVHPALG
Trigger: GCCAAGGGCCGGGTGTACTTCACATACTGCGGGCAGCGCCTCTCACCATATCTTGAAGACGTCTCTGGTGGCATGTGGCCAGTGGTTCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 90 bp ACCAGCAGGAGCCCCATCCTCGATGTGAAGGGCGCTTGCTCAGGTTaGTGCAACAAGCCCTGGCGTTTGAGCAGGGCCAAAGTTTCCTCA +
Preference number: 5 (lower is better)
Translates to: TSRSPILDVKGACSG*CNKPWRLSRAKVSS
Trigger: TGAGGAAACTTTGGCCCTGCTCAAACGCCAGGGCTTGTTGCAGCAACCTGAGCAAGCGCCCTTCACATCGAGGATGGGGCTCCTGCTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp CACCAGTGCCTGCTTGCGAGTGTTTCCCCGCCGCCACCTTGTCTGTaGAGCCAAAAGGAAACTGCTGCTGGACACAGCTTGGTCAGGGTT +
Preference number: 5 (lower is better)
Translates to: HQCLLASVSPPPPCL*SQKETAAGHSLVRV
Trigger: AACCCTGACCAAGCTGTGTCCAGCAGCAGTTTCCTTTTGGCTGCACAGACAAGGTGGCGGCGGGGAAACACTCGCAAGCAGGCACTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp TCCGTGGCGGAGCAGTTCTGGGAATGGATGCAATGCTGTAAAGACTaGGCCAGGAGGATCGAGCTGGAGCTGATGGTGCCGTCTGGGAGA +
Preference number: 5 (lower is better)
Translates to: SVAEQFWEWMQCCKD*ARRIELELMVPSGR
Trigger: TCTCCCAGACGGCACCATCAGCTCCAGCTCGATCCTCCTGGCGCAGTCTTTACAGCATTGCATCCATTCCCAGAACTGCTCCGCCACGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 90 bp GAGCAGATCTGTTTCGTCAGCTCTAAAAGGCTCTCCTCGCCCTGGTaGAGGGTCCGGGTGATGGCCACGTTGAGCCACTCTCTCACTGTC +
Preference number: 5 (lower is better)
Translates to: EQICFVSSKRLSSPW*RVRVMATLSHSLTV
Trigger: GACAGTGAGAGAGTGGCTCAACGTGGCCATCACCCGGACCCTGCACCAGGGCGAGGAGAGCCTTTTAGAGCTGACGAAACAGATCTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 90 bp AGCAGCAGCAGCGACAGCGAGGAACTCTGCAGCTCCTTACACACCTaGCACAGGAAGTGGCGGAAAGAGCCGCCTCTGCTTCAAGGAGAA +
Preference number: 5 (lower is better)
Translates to: SSSSDSEELCSSLHT*HRKWRKEPPLLQGE
Trigger: TTCTCCTTGAAGCAGAGGCGGCTCTTTCCGCCACTTCCTGTGGCAGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCTGCTGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS CCA 90 bp CAACACAGCGGTTGGCAAGCACCTGGAAGGCAGCCCAGGCCATGGTaGCCACCTTCTGCTTCTTGGTCTGTTTCTCACTGGAGCTGGACT +
Preference number: 5 (lower is better)
Translates to: QHSGWQAPGRQPRPW*PPSASWSVSHWSWT
Trigger: AGTCCAGCTCCAGTGAGAAACAGACCAAGAAGCAGAAGGTGGCCACCATGGCCTGGGCTGCCTTCCAGGTGCTTGCCAACCGCTGTGTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp AGTAATCTCTTTGGGCTGTCTTCGGTCAGCCTGCAAAGGAGGTGGTaGGGGCCGAGCACAGTCCCGGTAGAGCATCCTCAGCCGTTCACA +
Preference number: 5 (lower is better)
Translates to: SNLFGLSSVSLQRRW*GPSTVPVEHPQPFT
Trigger: TGTGAACGGCTGAGGATGCTCTACCGGGACTGTGCTCGGCCCCCACCACCTCCTTTGCAGGCTGACCGAAGACAGCCCAAAGAGATTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000552437.1
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp CCTCCCACAATTTCCAGTGGGTCCAAGGTGATCTCAGGGGCCGCGTaGTCCGCTGTCCTCTGCACAGTGGCATTCAGCACTCGATTCATC +
Preference number: 5 (lower is better)
Translates to: PPTISSGSKVISGAA*SAVLCTVAFSTRFI
Trigger: GATGAATCGAGTGCTGAATGCCACTGTGCAGAGGACAGCGGACCACGCGGCCCCTGAGATCACCTTGGACCCACTGGAAATTGTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS-3UTR CAA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCATTGGAAGATTGGGGTaGGTGGCAAGAAGATTGAGT +
Preference number: 5 (lower is better)
Translates to: RAAVVASQASRVGASVTAIGRLG*VARRLS
Trigger: ACTCAATCTTCTTGCCACCAACCCCAATCTTCCAAT...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CGGGCCGCAGTGGTGGCTTCCCAAGCCAGCAGAGTGGGTGCCTCAGTGACAGCCTCAATTGGATGCTGCTaGCCCAAGACACTTGTGATT +
Preference number: 5 (lower is better)
Translates to: RAAVVASQASRVGASVTASIGCC*PKTLVI
Trigger: AATCACAAGTGTCTTGGGCAAGCAGCATCCAATTGA...GGCTGTCACTGAGGCACCCACTCTGCTGGCTTGGGAAGCCACCACTGCGGCCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGGGAGATCACGCCATaGGCCTCCACCTGCCACTGG +
Preference number: 5 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTGEITP*ASTCHW
Trigger: CCAGTGGCAGGTGGAGGCCAATGGCGTGATCTCCCC...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGCAGGTTCAGAAGCGGTaGGAGAAAGAACTGTCTGAC +
Preference number: 5 (lower is better)
Translates to: GWPQACLWRRSAESTSALQVQKR*EKELSD
Trigger: GTCAGACAGTTCTTTCTCCAACCGCTTCTGAACCTG...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTACAACTTTCTCCATGTaGGCGCCAGTACCAAGTCGG +
Preference number: 5 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSTTFSM*APVPSR
Trigger: CCGACTTGGTACTGGCGCCAACATGGAGAAAGTTGT...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGGCACAGGATCAGTCCTaGCAAGCTCCGAGTTCCTCT +
Preference number: 5 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWAQDQS*QAPSSS
Trigger: AGAGGAACTCGGAGCTTGCAAGGACTGATCCTGTGC...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTCTGGTGCCAGCATCATaGTCACTGTCAGATGCCATG +
Preference number: 5 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSLVPAS*SLSDAM
Trigger: CATGGCATCTGACAGTGACAATGATGCTGGCACCAG...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCCACCTCCTCGACGTCCATGTTGACTTaGGATTCGGAAATTGGGAAC +
Preference number: 5 (lower is better)
Translates to: FSHATRMCRPRLHSSTSSTSMLT*DSEIGN
Trigger: GTTCCCAATTTCCGAATCCAAAGTCAACATGGACGT...CGAGGAGGTGGAGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CAA 90 bp CCAGAAGAACTCGATGTGCTGGTCCGTCTCCATCAGCCCCACTTGGTACATGGTAGCATGTCCTCGGGCTaGCTGCCTCCGATGCTGAGC +
Preference number: 5 (lower is better)
Translates to: PEELDVLVRLHQPHLVHGSMSSG*LPPMLS
Trigger: GCTCAGCATCGGAGGCAGCAAGCCCGAGGACATGCT...ACCATGTACCAAGTGGGGCTGATGGAGACGGACCAGCACATCGAGTTCTTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CAA 90 bp CTTGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCCACCTCTTGCTGTACTTGCTCTaGTCAAACTTGGGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: LVLPRHKDVPAPAAQLHLLLYLL*SNLGFG
Trigger: GCCAAAGCCCAAGTTTGACAAGAGCAAGTACAGCAA...GAGGTGGAGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CAA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTACATGGTGTGGGCCTaGAGGAACTCGAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: PHSKELWPLGRQRADHLLYMVWA*RNSRLM
Trigger: CATCAACCTCGAGTTCCTCAAGGCCCACACCATGTA...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CTGGGAGGCGATCTCAGCGCACAGGGCCTCCAGCTCGGTCTCATCATTGATGCTGGGATGCGCTCCTGGTaGCAGGCAAACTTGATGAAC +
Preference number: 5 (lower is better)
Translates to: LGGDLSAQGLQLGLIIDAGMRSW*QANLMN
Trigger: GTTCATCAAGTTTGCCTGCAACCAGGAGCGCATCCC...AGCATCAATGATGAGACCGAGCTGGAGGCCCTGTGCGCTGAGATCGCCTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS TCA 90 bp GGCCACGGCAGCAATCCGGCATGGTGGCCCATGAGTGCCTGGGTCTaGTGCAATACTGGTGCCAGCATCATTGTCACTGTCAGATGCCAT +
Preference number: 5 (lower is better)
Translates to: GHGSNPAWWPMSAWV*CNTGASIIVTVRCH
Trigger: ATGGCATCTGACAGTGACAATGATGCTGGCACCAGTATTGCATCAGACCCAGGCACTCATGGGCCACCATGCCGGATTGCTGCCGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 90 bp AGCAGGAGCCCCATCCTCGATGTGAAGGGCGCTTGCTCAGGTTGCTaGAACAAGCCCTGGCGTTTGAGCAGGGCCAAAGTTTCCTCATCA +
Preference number: 5 (lower is better)
Translates to: SRSPILDVKGACSGC*NKPWRLSRAKVSSS
Trigger: TGATGAGGAAACTTTGGCCCTGCTCAAACGCCAGGGCTTGTTGCAGCAACCTGAGCAAGCGCCCTTCACATCGAGGATGGGGCTCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp TCTTCGGACTTCCCTTCACTGTCCTCTGATTTCCAGGACAGCAGCTaGTCTGCGAAGGCCATAGCCAGTGGGAACTCCAGGGGCAGGGAA +
Preference number: 5 (lower is better)
Translates to: SSDFPSLSSDFQDSS*SAKAIASGNSRGRE
Trigger: TTCCCTGCCCCTGGAGTTCCCACTGGCTATGGCCTTCGCAGAGCAGCTGCTGTCCTGGAAATCAGAGGACAGTGAAGGGAAGTCCGAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 90 bp GCTTGGTGCTCACCACCTTCACGGGGTGCTGCTCCTTCCCGGCCTTaGTGTACTTGCTCTTGTCAAACTTGGGCTTTGGCACGCCATACT +
Preference number: 5 (lower is better)
Translates to: AWCSPPSRGAAPSRP*CTCSCQTWALARHT
Trigger: AGTATGGCGTGCCAAAGCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGCAGCACCCCGTGAAGGTGGTGAGCACCAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp CCAGCTTTGCTAAGAGCAGGGAGGCGATCTTGGAAGCTGGGTCGCTaGGATCCTCCTGCTCACTGTTTAAGGAGGGGACAGAGTAGCTCC +
Preference number: 5 (lower is better)
Translates to: PALLRAGRRSWKLGR*DPPAHCLRRGQSSS
Trigger: GGAGCTACTCTGTCCCCTCCTTAAACAGTGAGCAGGAGGATCCCAGCGACCCAGCTTCCAAGATCGCCTCCCTGCTCTTAGCAAAGCTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS-3UTR CAA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCCAGTCAGCAGGCTCCTaGGTCAAGCTCAAAGGCTGG +
Preference number: 5 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTQSAGS*VKLKGW
Trigger: CCAGCCTTTGAGCTTGACCAAGGAGCCTGCTGACTG...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TGGGGCACAGCAGCAGCAGCGACAGCGAGGAACTCTGCAGCTCCTTACACACCTCTCCAAGTAATCTCTTaGGGCTGTCTTCGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: WGTAAAATARNSAAPYTPLQVIS*GCLRSA
Trigger: GGCTGACCGAAGACAGCCCAAAGAGATTACTTGGAG...AGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCTGCTGCTGCTGTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CAA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGAAGTACACCCGGCCCTaGGCTGGCTGTCCCGGAGGA +
Preference number: 5 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLKYTRP*AGCPGG
Trigger: TCCTCCGGGACAGCCAGCCAAGGGCCGGGTGTACTT...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCTGGTGCCAGCATCATaGTCACTGTCAGATGCCATG +
Preference number: 5 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWLVPAS*SLSDAM
Trigger: CATGGCATCTGACAGTGACAATGATGCTGGCACCAG...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTGGTGTCACTATCATATaGTTGCTGAGCGGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSGVTII*LLSGGH
Trigger: GTGGCCACCGCTCAGCAACAATATGATAGTGACACC...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCTGCTGGCTACATTATaGCTGTCTGGAGAGCGGGTT +
Preference number: 5 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWLLATL*LSGERV
Trigger: AACCCGCTCTCCAGACAGCAATAATGTAGCCAGCAG...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTCTTTGGATTCGGAAATaGGGAACTCTTCGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: PHSKELWPLGRQRADHLLLWIRK*GTLRRG
Trigger: TCCCCTCCGAAGAGTTCCCAATTTCCGAATCCAAAG...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGGGTGCAAGCCCAGTGTaGGCTGGGGACGCGTCCCGC +
Preference number: 5 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTGASPV*AGDASR
Trigger: GCGGGACGCGTCCCCAGCCAACACTGGGCTTGCACC...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCCGGGAAGACTGGCGCTaGCCCGACGAGGAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSREDWR*PDEEAF
Trigger: AAAGGCCTCCTCGTCGGGCAAGCGCCAGTCTTCCCG...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAGCGGCGAGGGGCTGGTaGTCCAGGGAAGTGACTGTG +
Preference number: 5 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGAARGW*SREVTV
Trigger: CACAGTCACTTCCCTGGACAACCAGCCCCTCGCCGC...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCGTCCTGCTGACGCTGTaGAGCACAGCCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTVLLTL*STALSL
Trigger: CAAGGACAAGGCTGTGCTCAACAGCGTCAGCAGGAC...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTCCAGTGAAGCGGATGTaGAAGGCATATGTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSPVKRM*KAYVGS
Trigger: TGACCCCACATATGCCTTCAACATCCGCTTCACTGG...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCCAGTGAAGCGGATGTaGAAGGCATATGTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWPVKRM*KAYVGS
Trigger: TGACCCCACATATGCCTTCAACATCCGCTTCACTGG...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGGGGCACAGCAGCAGCAGCGACAGCGAGGAACTCTGCAGCTCCTTACACACCTCCAGTGAAGCGGATGTaGAAGGCATATGTGGGGTCA +
Preference number: 5 (lower is better)
Translates to: WGTAAAATARNSAAPYTPPVKRM*KAYVGS
Trigger: TGACCCCACATATGCCTTCAACATCCGCTTCACTGG...AGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCTGCTGCTGCTGTGCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CAA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTCTGCAGCAGGGCTTGTaGGGGCTGTCAGGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFLQQGL*GLSGLS
Trigger: GGAGAGCCCTGACAGCCCCAACAAGCCCTGCTGCAG...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAGTGTGTCTCACGTGTTaGGGCAATTGGCCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLVCLTC*GNWPSH
Trigger: GTGGCTGGGCCAATTGCCCAAACACGTGAGACACAC...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS TCA 90 bp CAAACCACTTGTTCCACCAAAAAGAGATCGGGTGGCAGAGCTGCCTaGTCCCCCTGGAGGAGGCACCAGCATCACCAAGTAGGTGCCACA +
Preference number: 5 (lower is better)
Translates to: QTTCSTKKRSGGRAA*SPWRRHQHHQVGAT
Trigger: TGTGGCACCTACTTGGTGATGCTGGTGCCTCCTCCAGGGGGATCAGGCAGCTCTGCCACCCGATCTCTTTTTGGTGGAACAAGTGGTTTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 90 bp TGGAGCTGGACTCGGTCTGATTGCTCAAGCTACACAGTCGATCCATaGGCTGCACAAGGCCACTGCGTACCAGGCACTTCTCTTCGCTCC +
Preference number: 5 (lower is better)
Translates to: WSWTRSDCSSYTVDP*AAQGHCVPGTSLRS
Trigger: GGAGCGAAGAGAAGTGCCTGGTACGCAGTGGCCTTGTGCAGCTCATGGATCGACTGTGTAGCTTGAGCAATCAGACCGAGTCCAGCTCCA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 90 bp CGGAATGGTGTCAGGCTCATCTTCGGACTTCCCTTCACTGTCCTCTaGTTTCCAGGACAGCAGCTGCTCTGCGAAGGCCATAGCCAGTGG +
Preference number: 5 (lower is better)
Translates to: RNGVRLIFGLPFTVL*FPGQQLLCEGHSQW
Trigger: CCACTGGCTATGGCCTTCGCAGAGCAGCTGCTGTCCTGGAAATCAGAGGACAGTGAAGGGAAGTCCGAAGATGAGCCTGACACCATTCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 90 bp CTCTTTGAAGCCTCCAAGTGCACACAGTGCGGCAACGGCCTGGCGTaGAATTCTCTGAAGTTTGGCAAGTTTCCTGCCACTGCTGCTGCC +
Preference number: 5 (lower is better)
Translates to: LFEASKCTQCGNGLA*NSLKFGKFPATAAA
Trigger: GGCAGCAGCAGTGGCAGGAAACTTGCCAAACTTCAGAGAATTGCACGCCAGGCCGTTGCCGCACTGTGTGCACTTGGAGGCTTCAAAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp GCCATTTCGCTTCACTTTGTGGCCGAGGCCATATACGAGCACCCGTaGCCACGGTGCCTTGTACAGAGAGGAGTCTTTGCGGAATCCAGA +
Preference number: 5 (lower is better)
Translates to: AISLHFVAEAIYEHP*PRCLVQRGVFAESR
Trigger: TCTGGATTCCGCAAAGACTCCTCTCTGTACAAGGCACCGTGGGCACGGGTGCTCGTATATGGCCTCGGCCACAAAGTGAAGCGAAATGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 90 bp TCACCACCTTCACGGGGTGCTGCTCCTTCCCGGCCTTGCTGTACTTaGTCTTGTCAAACTTGGGCTTTGGCACGCCATACTTCCTCAGGA +
Preference number: 5 (lower is better)
Translates to: SPPSRGAAPSRPCCT*SCQTWALARHTSSG
Trigger: TCCTGAGGAAGTATGGCGTGCCAAAGCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGCAGCACCCCGTGAAGGTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 90 bp TCCTGCAAGGAAGCAGCATTCATTACCTCTCATCAGGGAACAGCCTaGACTTCTGGTCTGGTGCACCACACGGGGAACAGCCCACCTCAG +
Preference number: 5 (lower is better)
Translates to: SCKEAAFITSHQGTA*TSGLVHHTGNSPPQ
Trigger: CTGAGGTGGGCTGTTCCCCGTGTGGTGCACCAGACCAGAAGTGCAGGCTGTTCCCTGATGAGAGGTAATGAATGCTGCTTCCTTGCAGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547352.1
CDS CCA 90 bp TGTGAGTTCTTCAATTCTGGGTCCTCCCTGAAGGACCATCGTCACTaGACCCACAAGATGCGTCACTCCCCCGACTCGTACGGCAGCTGT +
Preference number: 5 (lower is better)
Translates to: CEFFNSGSSLKDHRH*THKMRHSPDSYGSC
Trigger: ACAGCTGCCGTACGAGTCGGGGGAGTGACGCATCTTGTGGGTCCAGTGACGATGGTCCTTCAGGGAGGACCCAGAATTGAAGAACTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp CTAGCTTTGGAGACGGGCGTTGGTCAAGCAGCAGGGAGAGGAGTTTaGACACACAAGCTGGCTGGCTCAGGATGGCTTTACCTATGTGGC +
Preference number: 5 (lower is better)
Translates to: LALETGVGQAAGRGV*THKLAGSGWLYLCG
Trigger: GCCACATAGGTAAAGCCATCCTGAGCCAGCCAGCTTGTGTGTCCAAACTCCTCTCCCTGCTGCTTGACCAACGCCCGTCTCCAAAGCTAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp GTCCAGTGTGACCAGCCCATTGGTGGCAGTCCTTCGGTAGCCTGCTaGGGGCCTTTCCAACATGTCAATAGGATACCAGTATCGCACCAG +
Preference number: 5 (lower is better)
Translates to: VQCDQPIGGSPSVAC*GPFQHVNRIPVSHQ
Trigger: CTGGTGCGATACTGGTATCCTATTGACATGTTGGAAAGGCCCCCAGCAGGCTACCGAAGGACTGCCACCAATGGGCTGGTCACACTGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548896.1
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp CTCTGCGCATATCCCCCTTCTGTCTATACGCTGTGGCAGAGACTCTaGGGAGCCTCCCCAGTGACCTTCTCTCCCTTTCCTTTGATGCTG +
Preference number: 5 (lower is better)
Translates to: LCAYPPSVYTLWQRL*GASPVTFSPFPLML
Trigger: CAGCATCAAAGGAAAGGGAGAGAAGGTCACTGGGGAGGCTCCCCAGAGTCTCTGCCACAGCGTATAGACAGAAGGGGGATATGCGCAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547085.1
CDS CCA 90 bp TTGTCATCCCTGTTTCTACCGAGAAGCCACTGGCATCCGGGACTCTaGCTCTGCTATTGTCTTGCAATGGCTGCCCTGAGTGACCCAGGG +
Preference number: 5 (lower is better)
Translates to: LSSLFLPRSHWHPGL*LCYCLAMAALSDPG
Trigger: CCCTGGGTCACTCAGGGCAGCCATTGCAAGACAATAGCAGAGCCAGAGTCCCGGATGCCAGTGGCTTCTCGGTAGAAACAGGGATGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS-3UTR CAA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTCTTGTGATTGGAAGATaGGGGTTGGTGGCAAGAAGA +
Preference number: 5 (lower is better)
Translates to: AGHRLVCGGALLKARALCLVIGR*GLVARR
Trigger: TCTTCTTGCCACCAACCCCAATCTTCCAATCACAAG...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGCCAGCGGCGCCCCACTaGCTGCCTCGCCCGTGCAAC +
Preference number: 5 (lower is better)
Translates to: GILSIMVLDAFPKSYREEPAAPH*LPRPCN
Trigger: GTTGCACGGGCGAGGCAGCAAGTGGGGCGCCGCTGG...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000377560.9
CDS-3UTR CAA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTCAGGTTCAGAAGCGGTaGGAGAAAGAACTGTCTGAC +
Preference number: 5 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSQVQKR*EKELSD
Trigger: GTCAGACAGTTCTTTCTCCAACCGCTTCTGAACCTG...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTAAGTACACCCGGCCCTaGGCTGGCTGTCCCGGAGGA +
Preference number: 5 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACKYTRP*AGCPGG
Trigger: TCCTCCGGGACAGCCAGCCAAGGGCCGGGTGTACTT...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTATTCCGCTCTGCTTCATaGCGGAAGCGTCTTCGGATG +
Preference number: 5 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLFRSAS*RKRLRM
Trigger: CATCCGAAGACGCTTCCGCAATGAAGCAGAGCGGAA...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTCTCGGATGGCAAATTTaGGCAGAGCAGTTCCAACAG +
Preference number: 5 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFLGWQI*AEQFQQ
Trigger: CTGTTGGAACTGCTCTGCCAAAATTTGCCATCCGAG...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTTGGGCGTTGCAGGCCTaGCGGATGGCGCCTCTGACT +
Preference number: 5 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACWALQA*RMAPLT
Trigger: AGTCAGAGGCGCCATCCGCAAGGCCTGCAACGCCCA...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTCCTCGGCCTTGTCTTTaGGCTTCTTGGTGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSPRPCL*ASWCLL
Trigger: AAGAAGACACCAAGAAGCCAAAAGACAAGGCCGAGG...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTGAGGTCGCTGACGGTTaGGGAGATGCCCTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTEVADG*GDALRA
Trigger: AGCTCGCAGGGCATCTCCCAAACCGTCAGCGACCTC...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAGAGGCCGTCTCTGCATaGTCCAGGGGCTCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTEAVSA*SRGSPR
Trigger: CCTGGGGGAGCCCCTGGACAATGCAGAGACGGCCTC...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAACGACTGCGAAGCCTTaGATGGGGCGGGCGGCGAGG +
Preference number: 5 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTTTAKP*MGRAAR
Trigger: CCTCGCCGCCCGCCCCATCAAAGGCTTCGCAGTCGT...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTTTGCTGTACTTGCTCTaGTCAAACTTGGGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSLLYLL*SNLGFG
Trigger: GCCAAAGCCCAAGTTTGACAAGAGCAAGTACAGCAA...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGTCCTTGGCGGGCGGCTaGGTGATAGGCCGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRSLAGG*VIGRLV
Trigger: CACCAAGCGGCCTATCACCAAGCCGCCCGCCAAGGA...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGCTGTTGAGCACAGCCTaGTCCTTGGCGGGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLLLSTA*SLAGGL
Trigger: CAAGCCGCCCGCCAAGGACAAGGCTGTGCTCAACAG...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCCCAGGGTCCACTTTCTaGAGGCCTTCTGTGCATGTC +
Preference number: 5 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTPGSTF*RPSVHV
Trigger: GACATGCACAGAAGGCCTCAAGAAAGTGGACCCTGG...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTGTCTCCAGTGTGGTGTaGAGGGACTGCAGCAAGGCG +
Preference number: 5 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLVSSVV*RDCSKA
Trigger: CGCCTTGCTGCAGTCCCTCAACACCACACTGGAGAC...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GGCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGGGGGTCAGGATATACTaGCCCTTGTTCTTATTGACA +
Preference number: 5 (lower is better)
Translates to: GWPQACLWRRSAESTSALGVRIY*PLFLLT
Trigger: TGTCAATAAGAACAAGGGCAAGTATATCCTGACCCC...CAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACCGCTTCCTGCAGGTCTaGCTCAGGGTCCAAGGGCTC +
Preference number: 5 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDRFLQV*LRVQGL
Trigger: GAGCCCTTGGACCCTGAGCAAGACCTGCAGGAAGCG...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CAGCAGCGACAGCGAGGAACTCTGCAGCTCCTTACACACCTGCCACAGGAAGTGTACATGGTGTGGGCCTaGAGGAACTCGAGGTTGATG +
Preference number: 5 (lower is better)
Translates to: QQRQRGTLQLLTHLPQEVYMVWA*RNSRLM
Trigger: CATCAACCTCGAGTTCCTCAAGGCCCACACCATGTA...CACTTCCTGTGGCAGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CAA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAACTCCATCAGCCCCACTaGGTACATGGTGTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: QSRGTACGHSPPELTCIQLHQPH*VHGVGL
Trigger: AAGGCCCACACCATGTACCAAGTGGGGCTGATGGAG...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AGCGGGACGTCTGCCCGAATTGCAATCCCCAGCAGCTGCCCCAGGAAGTGCAGCACCTCCAGAGTTGACTaGCATCCAATACAACTGATG +
Preference number: 5 (lower is better)
Translates to: SGTSARIAIPSSCPRKCSTSRVD*HPIQLM
Trigger: CATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGT...GCTGCACTTCCTGGGGCAGCTGCTGGGGATTGCAATTCGGGCAGACGTCCCGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CAA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTCACTCACCTCCAGAGTaGACTTGCATCCAATACAAC +
Preference number: 5 (lower is better)
Translates to: AGHRLVCGGALLKARALCHSPPE*TCIQYN
Trigger: GTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTG...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTAAGCAGGGGAACTGCTaGCGGGCACTCACCTCCAGA +
Preference number: 5 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLKQGNC*RALTSR
Trigger: TCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS TCA 90 bp GATGTACTGCACAAGTGCCACGTCCATCTCCAGGGTCCACTTTCTTaGGGCCTTCTGTGCATGTCGGACATCGATGCATGCGCACCTCTC +
Preference number: 5 (lower is better)
Translates to: DVLHKCHVHLQGPLS*GLLCMSDIDACAPL
Trigger: GAGAGGTGCGCATGCATCGATGTCCGACATGCACAGAAGGCCTCAAGAAAGTGGACCCTGGAGATGGACGTGGCACTTGTGCAGTACATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548588.2
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 90 bp ACAGCAGGCCTGTATGGCTGGTTCCTGCCGGGCCCTAATCCTCAATaGTGTCTGAGTTTTGGCACGTGGGGCTCCTGTTCATTGTTCTCC +
Preference number: 5 (lower is better)
Translates to: TAGLYGWFLPGPNPQ*CLSFGTWGSCSLFS
Trigger: GGAGAACAATGAACAGGAGCCCCACGTGCCAAAACTCAGACATCATTGAGGATTAGGGCCCGGCAGGAACCAGCCATACAGGCCTGCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547085.1
CDS GCA 90 bp GAGGTTTATTATCGAAAGAGACAGGCCGGTGGAGAAGACTGCCGCTaGCAAAAGCCACCCATCCTGGTTCCAACTCCTCGTTCCGGCAGT +
Preference number: 5 (lower is better)
Translates to: EVYYRKRQAGGEDCR*QKPPILVPTPRSGS
Trigger: ACTGCCGGAACGAGGAGTTGGAACCAGGATGGGTGGCTTTTGGCAGCGGCAGTCTTCTCCACCGGCCTGTCTCTTTCGATAATAAACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp GGGAGTGAGGTTTATTATCGAAAGAGACAGGCCGGTGGAGAAGACTaGCGCTGCCAAAAGCCACCCATCCTGGTTCCAACTCCTCGTTCC +
Preference number: 5 (lower is better)
Translates to: GSEVYYRKRQAGGED*RCQKPPILVPTPRS
Trigger: GGAACGAGGAGTTGGAACCAGGATGGGTGGCTTTTGGCAGCGGCAGTCTTCTCCACCGGCCTGTCTCTTTCGATAATAAACCTCACTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp ATGACAAACCACTTGTTCCACCAAAAAGAGATCGGGTGGCAGAGCTaGCTGATCCCCCTGGAGGAGGCACCAGCATCACCAAGTAGGTGC +
Preference number: 5 (lower is better)
Translates to: MTNHLFHQKEIGWQS*LIPLEEAPASPSRC
Trigger: GCACCTACTTGGTGATGCTGGTGCCTCCTCCAGGGGGATCAGGCAGCTCTGCCACCCGATCTCTTTTTGGTGGAACAAGTGGTTTGTCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp CCAGAGATGCTTCTCGTGAGGCCCGACTGGGCTGCGATGGTGACATaGAGCAACAGCTCGGCTCGGTTCATTAAACTCTTCACTAACGTC +
Preference number: 5 (lower is better)
Translates to: PEMLLVRPDWAAMVT*SNSSARFIKLFTNV
Trigger: GACGTTAGTGAAGAGTTTAATGAACCGAGCCGAGCTGTTGCTGCATGTCACCATCGCAGCCCAGTCGGGCCTCACGAGAAGCATCTCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp GTTTCTACCTGCACCAGTTCATTCACCGTGTCATCCAAGCTGGAGTaGAGTGGTGTCATCTCGGCACACTGCAGTCTCTGCCTCCCAGGT +
Preference number: 5 (lower is better)
Translates to: VSTCTSSFTVSSKLE*SGVISAHCSLCLPG
Trigger: ACCTGGGAGGCAGAGACTGCAGTGTGCCGAGATGACACCACTGCACTCCAGCTTGGATGACACGGTGAATGAACTGGTGCAGGTAGAAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548896.1
CDS CCA 90 bp CCTGAACTTTCCCTTTCATGCTGTTCTTCTAAGGCCAGCTGGCGCTaGGCATTCCACAGTCCTCGCAAGGCATTCAGGCGGTATTCCAGC +
Preference number: 5 (lower is better)
Translates to: PELSLSCCSSKASWR*AFHSPRKAFRRYSS
Trigger: GCTGGAATACCGCCTGAATGCCTTGCGAGGACTGTGGAATGCCCAGCGCCAGCTGGCCTTAGAAGAACAGCATGAAAGGGAAAGTTCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550724.2
ENST00000682272.1
CDS CCA 90 bp CCCAGGCCATGGTGGCCACCTTCTGCTTCTTGGTCTGTTTCTCACTaGAGCTGGACTCGGTCTGATTGCTCAAGCTACACAGTCGATCCA +
Preference number: 5 (lower is better)
Translates to: PRPWWPPSASWSVSH*SWTRSDCSSYTVDP
Trigger: TGGATCGACTGTGTAGCTTGAGCAATCAGACCGAGTCCAGCTCCAGTGAGAAACAGACCAAGAAGCAGAAGGTGGCCACCATGGCCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp TTGAGAAGACTAAGGACATCCTGGAGCGCGTCATTCCCAGCAGCCTaGTTGCCACAGCACTCTGTGGCTCGGGCAAGATGGTTAGTGAGA +
Preference number: 5 (lower is better)
Translates to: LRRLRTSWSASFPAA*LPQHSVARARWLVR
Trigger: TCTCACTAACCATCTTGCCCGAGCCACAGAGTGCTGTGGCAACCAGGCTGCTGGGAATGACGCGCTCCAGGATGTCCTTAGTCTTCTCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp CAATCCGGCATGGTGGCCCATGAGTGCCTGGGTCTGATGCAATACTaGTGCCAGCATCATTGTCACTGTCAGATGCCATGGCGAAAGGCA +
Preference number: 5 (lower is better)
Translates to: QSGMVAHECLGLMQY*CQHHCHCQMPWRKA
Trigger: TGCCTTTCGCCATGGCATCTGACAGTGACAATGATGCTGGCACCAGTATTGCATCAGACCCAGGCACTCATGGGCCACCATGCCGGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp GCCACTCTCTCACTGTCTGGGAGTTGCCCTGGTAAAAGAGGTCCGTaGCGGAGCAGTTCTGGGAATGGATGCAATGCTGTAAAGACTGCG +
Preference number: 5 (lower is better)
Translates to: ATLSLSGSCPGKRGP*RSSSGNGCNAVKTA
Trigger: CGCAGTCTTTACAGCATTGCATCCATTCCCAGAACTGCTCCGCCACGGACCTCTTTTACCAGGGCAACTCCCAGACAGTGAGAGAGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS-3UTR CAA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACAGCTGTTCAGCCAGGTaGGTTAGGATCACATCCCGT +
Preference number: 5 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDSCSAR*VRITSR
Trigger: ACGGGATGTGATCCTAACCAACCTGGCTGAACAGCT...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGGGGGAGATCACGCCATaGGCCTCCACCTGCCACTGG +
Preference number: 5 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTGEITP*ASTCHW
Trigger: CCAGTGGCAGGTGGAGGCCAATGGCGTGATCTCCCC...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTGGGCGCTTGCTCAGGTaGCTGCAACAAGCCCTGGCG +
Preference number: 5 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAGRLLR*LQQALA
Trigger: CGCCAGGGCTTGTTGCAGCAACCTGAGCAAGCGCCC...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTTCAGGGCAGCAAGCGTaGCTGACGGGGAGGCTCTAT +
Preference number: 5 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTSGQQA*LTGRLY
Trigger: ATAGAGCCTCCCCGTCAGCAACGCTTGCTGCCCTGA...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCGCTGCTGGACACAGCTaGGTCAGGGTTGGTGCCGAT +
Preference number: 5 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSAAGHS*VRVGAD
Trigger: ATCGGCACCAACCCTGACCAAGCTGTGTCCAGCAGC...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTGCTGCTGGACACAGCTaGGTCAGGGTTGGTGCCGAT +
Preference number: 5 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTAAGHS*VRVGAD
Trigger: ATCGGCACCAACCCTGACCAAGCTGTGTCCAGCAGC...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTTCCCCGCCGCCACCTaGTCTGTGCAGCCAAAAGGA +
Preference number: 5 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLFPAAT*SVQPKG
Trigger: TCCTTTTGGCTGCACAGACAAGGTGGCGGCGGGGAA...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTCTTTGGAGACGGGCGTaGGTCAAGCAGCAGGGAGAG +
Preference number: 5 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTLWRRA*VKQQGE
Trigger: CTCTCCCTGCTGCTTGACCAACGCCCGTCTCCAAAG...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTACTGCTGGCTACATTATaGCTGTCTGGAGAGCGGGTT +
Preference number: 5 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLLLATL*LSGERV
Trigger: AACCCGCTCTCCAGACAGCAATAATGTAGCCAGCAG...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCACGGGTGATGGCCACGTaGAGCCACTCTCTCACTGTC +
Preference number: 5 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSRVMAT*SHSLTV
Trigger: GACAGTGAGAGAGTGGCTCAACGTGGCCATCACCCG...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGGTGCAAGCCCAGTGTaGGCTGGGGACGCGTCCCGC +
Preference number: 5 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIGASPV*AGDASR
Trigger: GCGGGACGCGTCCCCAGCCAACACTGGGCTTGCACC...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGCGGGAAGACTGGCGCTaGCCCGACGAGGAGGCCTTT +
Preference number: 5 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTREDWR*PDEEAF
Trigger: AAAGGCCTCCTCGTCGGGCAAGCGCCAGTCTTCCCG...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTTGGGCGTTGCAGGCCTaGCGGATGGCGCCTCTGACT +
Preference number: 5 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAWALQA*RMAPLT
Trigger: AGTCAGAGGCGCCATCCGCAAGGCCTGCAACGCCCA...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTTCCCCGCCCTCGGCCTaGTCTTTTGGCTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTSPPSA*SFGFLV
Trigger: CACCAAGAAGCCAAAAGACAAGGCCGAGGGCGGGGA...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACAGCACAGCCTTGTCCTaGGCGGGCGGCTTGGTGATA +
Preference number: 5 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDSTALS*AGGLVI
Trigger: TATCACCAAGCCGCCCGCCAAGGACAAGGCTGTGCT...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGCTGTTGAGCACAGCCTaGTCCTTGGCGGGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRLLSTA*SLAGGL
Trigger: CAAGCCGCCCGCCAAGGACAAGGCTGTGCTCAACAG...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGTCTCCAGTGTGGTGTaGAGGGACTGCAGCAAGGCG +
Preference number: 5 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDVSSVV*RDCSKA
Trigger: CGCCTTGCTGCAGTCCCTCAACACCACACTGGAGAC...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTGTCTCCAGTGTGGTGTaGAGGGACTGCAGCAAGGCG +
Preference number: 5 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTVSSVV*RDCSKA
Trigger: CGCCTTGCTGCAGTCCCTCAACACCACACTGGAGAC...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACACTGCAGCAGGGCTTGTaGGGGCTGTCAGGGCTCTCC +
Preference number: 5 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTLQQGL*GLSGLS
Trigger: GGAGAGCCCTGACAGCCCCAACAAGCCCTGCTGCAG...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCGTGTGGCCCTTTCCCTaGTCCTACGTCACTGCAGGG +
Preference number: 5 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSVWPFP*SYVTAG
Trigger: CCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACAC...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAGGCACATCTTCTTTCTaGGACCAGCATCCACACTCC +
Preference number: 5 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLGTSSF*DQHPHS
Trigger: GGAGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCC...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATAAGCAGGGGAACTGCTaGCGGGCACTCACCTCCAGA +
Preference number: 5 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYKQGNC*RALTSR
Trigger: TCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS TCA 90 bp AAAGGAAACTGCTGCTGGACACAGCTTGGTCAGGGTTGGTGCCGATaGAAGCAAACAGCTGCCCTAGCAGGACACTGTAGGTGGGCTTGT +
Preference number: 5 (lower is better)
Translates to: KGNCCWTQLGQGWCR*KQTAALAGHCRWAC
Trigger: ACAAGCCCACCTACAGTGTCCTGCTAGGGCAGCTGTTTGCTTTCATCGGCACCAACCCTGACCAAGCTGTGTCCAGCAGCAGTTTCCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 90 bp GCCTGTATGGCTGGTTCCTGCCGGGCCCTAATCCTCAATGATGTCTaGGTTTTGGCACGTGGGGCTCCTGTTCATTGTTCTCCCTTCACA +
Preference number: 5 (lower is better)
Translates to: ACMAGSCRALILNDV*VLARGAPVHCSPFT
Trigger: TGTGAAGGGAGAACAATGAACAGGAGCCCCACGTGCCAAAACTCAGACATCATTGAGGATTAGGGCCCGGCAGGAACCAGCCATACAGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547085.1
CDS GCA 90 bp CTCGCAAGGCATTCAGGCGGTATTCCAGCAGCCGGGCATAGGCATTaGTCTGATTCCCACAAACAGAGCGCAAACGTTCTGCTAATTCCG +
Preference number: 5 (lower is better)
Translates to: LARHSGGIPAAGHRH*SDSHKQSANVLLIP
Trigger: CGGAATTAGCAGAACGTTTGCGCTCTGTTTGTGGGAATCAGAGCAATGCCTATGCCCGGCTGCTGGAATACCGCCTGAATGCCTTGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550724.2
ENST00000682272.1
CDS GCA 90 bp AGCTGCCTGATCCCCCTGGAGGAGGCACCAGCATCACCAAGTAGGTaGCACAGGTATATATGGGTGTCTTCCGCAGCATTTTTAGAGGCA +
Preference number: 5 (lower is better)
Translates to: SCLIPLEEAPASPSR*HRYIWVSSAAFLEA
Trigger: TGCCTCTAAAAATGCTGCGGAAGACACCCATATATACCTGTGGCACCTACTTGGTGATGCTGGTGCCTCCTCCAGGGGGATCAGGCAGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp CTATGTAGCAAGGCGATCACTTCTGCAGCCATGCTGTTTGCCACATaGCCACTGATGAAGGGACGCACAGGATCAGTCCTTGCAAGCTCC +
Preference number: 5 (lower is better)
Translates to: LCSKAITSAAMLFAT*PLMKGRTGSVLASS
Trigger: GGAGCTTGCAAGGACTGATCCTGTGCGTCCCTTCATCAGTGGGCATGTGGCAAACAGCATGGCTGCAGAAGTGATCGCCTTGCTACATAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp ATTGTCCAGTGTGACCAGCCCATTGGTGGCAGTCCTTCGGTAGCCTaGTGGGGGCCTTTCCAACATGTCAATAGGATACCAGTATCGCAC +
Preference number: 5 (lower is better)
Translates to: IVQCDQPIGGSPSVA*WGPFQHVNRIPVSH
Trigger: GTGCGATACTGGTATCCTATTGACATGTTGGAAAGGCCCCCAGCAGGCTACCGAAGGACTGCCACCAATGGGCTGGTCACACTGGACAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548896.1
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp ATCCTCGATGTGAAGGGCGCTTGCTCAGGTTGCTGCAACAAGCCCTaGCGTTTGAGCAGGGCCAAAGTTTCCTCATCACCTGAACTTTCC +
Preference number: 5 (lower is better)
Translates to: ILDVKGACSGCCNKP*RLSRAKVSSSPELS
Trigger: GGAAAGTTCAGGTGATGAGGAAACTTTGGCCCTGCTCAAACGCCAGGGCTTGTTGCAGCAACCTGAGCAAGCGCCCTTCACATCGAGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp CCTATGTGGCTCCTTGAGAGATCATTGAGAAGACTAAGGACATCCTaGAGCGCGTCATTCCCAGCAGCCTGGTTGCCACAGCACTCTGTG +
Preference number: 5 (lower is better)
Translates to: PMWLLERSLRRLRTS*SASFPAAWLPQHSV
Trigger: CACAGAGTGCTGTGGCAACCAGGCTGCTGGGAATGACGCGCTCCAGGATGTCCTTAGTCTTCTCAATGATCTCTCAAGGAGCCACATAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp AGTTTCCTAGCAGCTCCACCACCTGCAGGAGGACGGATGTCGGAATaGTGTCAGGCTCATCTTCGGACTTCCCTTCACTGTCCTCTGATT +
Preference number: 5 (lower is better)
Translates to: SFLAAPPPAGGRMSE*CQAHLRTSLHCPLI
Trigger: AATCAGAGGACAGTGAAGGGAAGTCCGAAGATGAGCCTGACACCATTCCGACATCCGTCCTCCTGCAGGTGGTGGAGCTGCTAGGAAACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp ACTCTGATGGGCTTCGCTGGTGTCAGGCTCAGCGTCTGCTCTGAATaGGCACAACTCTTAAATATCTCCGTCAGAACCTCTCTGGCTCCG +
Preference number: 5 (lower is better)
Translates to: TLMGFAGVRLSVCSE*AQLLNISVRTSLAP
Trigger: CGGAGCCAGAGAGGTTCTGACGGAGATATTTAAGAGTTGTGCCCATTCAGAGCAGACGCTGAGCCTGACACCAGCGAAGCCCATCAGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp CACAAGAAATATTTCCCATCCCATCCAGCACAAGAGAGCTCCTGGTaGCCAGCCCAGAAACTGTCCAGGTGGAAGACTGCCTTGGGTGGT +
Preference number: 5 (lower is better)
Translates to: HKKYFPSHPAQESSW*PAQKLSRWKTALGG
Trigger: ACCACCCAAGGCAGTCTTCCACCTGGACAGTTTCTGGGCTGGCCACCAGGAGCTCTCTTGTGCTGGATGGGATGGGAAATATTTCTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547352.1
CDS-3UTR CAA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAGCCAAATCGGTTGTTTaGGAGCTGTTCAGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLAKSVV*ELFSQV
Trigger: AACCTGGCTGAACAGCTCCAAAACAACCGATTTGGC...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGTATACTTGGTCTAAATaGAGGTCTAGCACGCCCAGA +
Preference number: 5 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWYTWSK*RSSTPR
Trigger: TCTGGGCGTGCTAGACCTCAATTTAGACCAAGTATA...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAACAGCTTGGTCAGGGTaGGTGCCGATGAAAGCAAAC +
Preference number: 5 (lower is better)
Translates to: QSRGTACGHSPPELTCIQTAWSG*VPMKAN
Trigger: GTTTGCTTTCATCGGCACCAACCCTGACCAAGCTGT...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTTCGGCAAATGGAAGTTaGGGCAGTTTTCTTTTTGTC +
Preference number: 5 (lower is better)
Translates to: AGHRLVCGGALLKARALCSANGS*GSFLFV
Trigger: GACAAAAAGAAAACTGCCCAAACTTCCATTTGCCGA...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGAAGTACACCCGGCCCTaGGCTGGCTGTCCCGGAGGA +
Preference number: 5 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTKYTRP*AGCPGG
Trigger: TCCTCCGGGACAGCCAGCCAAGGGCCGGGTGTACTT...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGCGGGTGATGGCCACGTaGAGCCACTCTCTCACTGTC +
Preference number: 5 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLRVMAT*SHSLTV
Trigger: GACAGTGAGAGAGTGGCTCAACGTGGCCATCACCCG...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTCGTGCCCACGGTGCCTaGTACAGAGAGGAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFRAHGA*YREESL
Trigger: CAAAGACTCCTCTCTGTACAAGGCACCGTGGGCACG...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCCGTGCCCACGGTGCCTaGTACAGAGAGGAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGRAHGA*YREESL
Trigger: CAAAGACTCCTCTCTGTACAAGGCACCGTGGGCACG...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGAGCATGTCCTCGGGCTaGCTGCCTCCGATGCTGAGC +
Preference number: 5 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKSMSSG*LPPMLS
Trigger: GCTCAGCATCGGAGGCAGCAAGCCCGAGGACATGCT...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGGCGGCGAGGGGCTGGTaGTCCAGGGAAGTGACTGTG +
Preference number: 5 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTAARGW*SREVTV
Trigger: CACAGTCACTTCCCTGGACAACCAGCCCCTCGCCGC...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AGATGTCCTTGTTCTCCCACGCCACAAGGATGTGCCGGCCCCGGCTGCACAGCTCGAATTTTCTCAATTTaGGCTCGGGATCTTATCTCC +
Preference number: 5 (lower is better)
Translates to: RCPCSPTPQGCAGPGCTARIFSI*ARDLIS
Trigger: GGAGATAAGATCCCGAGCCAAAATTGAGAAAATTCG...AGCTGTGCAGCCGGGGCCGGCACATCCTTGTGGCGTGGGAGAACAAGGACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CAA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTATTTTGGCTTCACAGTaGGCTTCTTCTCACTTAAGG +
Preference number: 5 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSILASQ*ASSHLR
Trigger: CCTTAAGTGAGAAGAAGCCAACTGTGAAGCCAAAAT...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGCCGCAGTGGGACTTCTTGTTTTTaGGTAGGTGACTTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: KAKCCQLLTQGPGGTGRSGTSCF*VGDFSG
Trigger: CCCAGAAAAGTCACCTACCAAAAAACAAGAAGTCCC...ACTGCGGCCCGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGGGGACTTCTTGTTTTTaGGTAGGTGACTTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWGTSCF*VGDFSG
Trigger: CCCAGAAAAGTCACCTACCAAAAAACAAGAAGTCCC...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGCCAGGGTCCACTTTCTaGAGGCCTTCTGTGCATGTC +
Preference number: 5 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTPGSTF*RPSVHV
Trigger: GACATGCACAGAAGGCCTCAAGAAAGTGGACCCTGG...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTAGGATATACTTGCCCTaGTTCTTATTGACAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSRIYLP*FLLTAE
Trigger: CTCAGCTGTCAATAAGAACAAGGGCAAGTATATCCT...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGGGGGTCAGGATATACTaGCCCTTGTTCTTATTGACA +
Preference number: 5 (lower is better)
Translates to: DLFGAKMQWVSLEAAQPWGVRIY*PLFLLT
Trigger: TGTCAATAAGAACAAGGGCAAGTATATCCTGACCCC...CCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTGGACGTCTGCCCGAATaGCAATCCCCAGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAGRLPE*QSPAAA
Trigger: GGCAGCTGCTGGGGATTGCAATTCGGGCAGACGTCC...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTGTGTGGCCGAGGTCATaGTACCCCCGGCTTCCTGCT +
Preference number: 5 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCVWPRS*YPRLPA
Trigger: AGCAGGAAGCCGGGGGTACAATGACCTCGGCCACAC...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATGTGTGTCTCACGTGTTaGGGCAATTGGCCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYVCLTC*GNWPSH
Trigger: GTGGCTGGGCCAATTGCCCAAACACGTGAGACACAC...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGGTGTGTCTCACGTGTTaGGGCAATTGGCCCAGCCAC +
Preference number: 5 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLVCLTC*GNWPSH
Trigger: GTGGCTGGGCCAATTGCCCAAACACGTGAGACACAC...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGGTGTGGCCCTTTCCCTaGTCCTACGTCACTGCAGGG +
Preference number: 5 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRVWPFP*SYVTAG
Trigger: CCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACAC...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGAAGCAGGGGAACTGCTaGCGGGCACTCACCTCCAGA +
Preference number: 5 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLKQGNC*RALTSR
Trigger: TCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTTCTCAGATACCTTACAGCTaGTCATCTACTCAAGTGATG +
Preference number: 5 (lower is better)
Translates to: SALCGRGHCTPGFLLGGSQIPYS*SSTQVM
Trigger: CATCACTTGAGTAGATGACAAGCTGTAAGGTATCTG...AGAACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS TCA 90 bp GTCATAACACGCTCCCAATCCTGGTACGAGAGCACCACGCCCCAGTaGGCTTCCAGCAGCATCTATGAGATCTGCACGACTTGTAAACTG +
Preference number: 5 (lower is better)
Translates to: VITRSQSWYESTTPQ*ASSSIYEICTTCKL
Trigger: CAGTTTACAAGTCGTGCAGATCTCATAGATGCTGCTGGAAGCTCACTGGGGCGTGGTGCTCTCGTACCAGGATTGGGAGCGTGTTATGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 90 bp AGAGACTCTGATGGGCTTCGCTGGTGTCAGGCTCAGCGTCTGCTCTaGATGGGCACAACTCTTAAATATCTCCGTCAGAACCTCTCTGGC +
Preference number: 5 (lower is better)
Translates to: RDSDGLRWCQAQRLL*MGTTLKYLRQNLSG
Trigger: GCCAGAGAGGTTCTGACGGAGATATTTAAGAGTTGTGCCCATTCAGAGCAGACGCTGAGCCTGACACCAGCGAAGCCCATCAGAGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 90 bp GGCCACAGCTTTGAGACTGGAGAGCCTACCATCTACTGCCAGCCCTaGTCTGAGTCCCTGAGGAAAGCTCAGGCAAGTCAATTGGCATTA +
Preference number: 5 (lower is better)
Translates to: GHSFETGEPTIYCQP*SESLRKAQASQLAL
Trigger: TAATGCCAATTGACTTGCCTGAGCTTTCCTCAGGGACTCAGATCAGGGCTGGCAGTAGATGGTAGGCTCTCCAGTCTCAAAGCTGTGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550968.5
CDS TCA 90 bp CTACCTGGATGGTCATTACTCCCCGACGTACTCCAGGCTGTACCTTaGGTGCAACTACTACAGCAGATGGCGGCCTCATTTCCAAGAGGT +
Preference number: 5 (lower is better)
Translates to: LPGWSLLPDVLQAVP*VQLLQQMAASFPRG
Trigger: ACCTCTTGGAAATGAGGCCGCCATCTGCTGTAGTAGTTGCACTCAAGGTACAGCCTGGAGTACGTCGGGGAGTAATGACCATCCAGGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS GCA 90 bp AGAGACACAACAGAGGTCATGGTCTCGCCAAAGGCTTCCTGGACCTaGTCGACCATCCCACCACATGTGAGTTCTTCAATTCTGGGTCCT +
Preference number: 5 (lower is better)
Translates to: RDTTEVMVSPKASWT*STIPPHVSSSILGP
Trigger: AGGACCCAGAATTGAAGAACTCACATGTGGTGGGATGGTCGAGCAGGTCCAGGAAGCCTTTGGCGAGACCATGACCTCTGTTGTGTCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp CTCGGGTTTTGGTGTTCTTTTTCTGAATGTGAACCACTGGCCACATaGCACCAGAGACGTCTTCAAGATATGGTGAGAGGCGCTGCCCGC +
Preference number: 5 (lower is better)
Translates to: LGFWCSFSECEPLAT*HQRRLQDMVRGAAR
Trigger: GCGGGCAGCGCCTCTCACCATATCTTGAAGACGTCTCTGGTGGCATGTGGCCAGTGGTTCACATTCAGAAAAAGAACACCAAAACCCGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 90 bp CTGGATGGTCATTACTCCCCGACGTACTCCAGGCTGTACCTTGAGTaGAACTACTACAGCAGATGGCGGCCTCATTTCCAAGAGGTCAAG +
Preference number: 5 (lower is better)
Translates to: LDGHYSPTYSRLYLE*NYYSRWRPHFQEVK
Trigger: CTTGACCTCTTGGAAATGAGGCCGCCATCTGCTGTAGTAGTTGCACTCAAGGTACAGCCTGGAGTACGTCGGGGAGTAATGACCATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS GCA 90 bp CTATGTAGCAAGGCGATCACTTCTGCAGCCATGCTGTTTGCCACATaGCCACTGATGAAGGGACGCACAGGATCAGTCCTGCAAGTGTCA +
Preference number: 5 (lower is better)
Translates to: LCSKAITSAAMLFAT*PLMKGRTGSVLQVS
Trigger: TGACACTTGCAGGACTGATCCTGTGCGTCCCTTCATCAGTGGGCATGTGGCAAACAGCATGGCTGCAGAAGTGATCGCCTTGCTACATAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS CCA 90 bp TCCTTCTCTTCTAACATTCTCTCATCAGGGAACAGCCTGCACTTCTaGTCTGGTGCACCACACGGGGAACAGCCCACCTCAGCAAAAACC +
Preference number: 5 (lower is better)
Translates to: SFSSNILSSGNSLHF*SGAPHGEQPTSAKT
Trigger: GGTTTTTGCTGAGGTGGGCTGTTCCCCGTGTGGTGCACCAGACCAGAAGTGCAGGCTGTTCCCTGATGAGAGAATGTTAGAAGAGAAGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp TCATCACCTGAACTTTCCCTTTCATGCTGTTCTTCTAAGGCCAGCTaGCGCTGGGCATTCCACAGTCCTCGCAAGGCATTCAGGCGGTAT +
Preference number: 5 (lower is better)
Translates to: SSPELSLSCCSSKAS*RWAFHSPRKAFRRY
Trigger: ATACCGCCTGAATGCCTTGCGAGGACTGTGGAATGCCCAGCGCCAGCTGGCCTTAGAAGAACAGCATGAAAGGGAAAGTTCAGGTGATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp GCACACAGAGACACAACAGAGGTCATGGTCTCGCCAAAGGCTTCCTaGACCTGCTCGACCATCCCACCACATGTGAGTTCTTCAATTCTG +
Preference number: 5 (lower is better)
Translates to: AHRDTTEVMVSPKAS*TCSTIPPHVSSSIL
Trigger: CAGAATTGAAGAACTCACATGTGGTGGGATGGTCGAGCAGGTCCAGGAAGCCTTTGGCGAGACCATGACCTCTGTTGTGTCTCTGTGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp CGTTGGTCAAGCAGCAGGGAGAGGAGTTTGGACACACAAGCTGGCTaGCTCAGGATGGCTTTACCTATGTGGCTCCTTGAGAGATCATTG +
Preference number: 5 (lower is better)
Translates to: RWSSSRERSLDTQAG*LRMALPMWLLERSL
Trigger: CAATGATCTCTCAAGGAGCCACATAGGTAAAGCCATCCTGAGCCAGCCAGCTTGTGTGTCCAAACTCCTCTCCCTGCTGCTTGACCAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp ATACCACCTGAACTTTCCCTTTCATGCTGTTCTTCTAAGGCCAGCTaGCGCTGGGCATTCCACAGTCCTCGCAAGGCATTCAGGCGGTAT +
Preference number: 5 (lower is better)
Translates to: IPPELSLSCCSSKAS*RWAFHSPRKAFRRY
Trigger: ATACCGCCTGAATGCCTTGCGAGGACTGTGGAATGCCCAGCGCCAGCTGGCCTTAGAAGAACAGCATGAAAGGGAAAGTTCAGGTGGTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550724.2
CDS-3UTR CAA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAAGCTTTATCAGGAGTGTaGTGTTCACGGCCACTTCTC +
Preference number: 5 (lower is better)
Translates to: QSRGTACGHSPPELTCIQALSGV*CSRPLL
Trigger: GAGAAGTGGCCGTGAACACAACACTCCTGATAAAGC...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATGGGCGCTTGCTCAGGTaGCTGCAACAAGCCCTGGCG +
Preference number: 5 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNGRLLR*LQQALA
Trigger: CGCCAGGGCTTGTTGCAGCAACCTGAGCAAGCGCCC...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCCGATGTGAAGGGCGCTaGCTCAGGTTGCTGCAACAA +
Preference number: 5 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSRCEGR*LRLLQQ
Trigger: TTGTTGCAGCAACCTGAGCAAGCGCCCTTCACATCG...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTAGCAGGGAGAGGAGTTaGGACACACAAGCTGGCTGG +
Preference number: 5 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACSRERS*DTQAGW
Trigger: CCAGCCAGCTTGTGTGTCCAAACTCCTCTCCCTGCT...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGCTCACAGTCTCTGGGTaGATAGACTCTACAGGTGGC +
Preference number: 5 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTLTVSG*IDSTGG
Trigger: GCCACCTGTAGAGTCTATCAACCCAGAGACTGTGAG...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTTCGGCAAATGGAAGTTaGGGCAGTTTTCTTTTTGTC +
Preference number: 5 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFSANGS*GSFLFV
Trigger: GACAAAAAGAAAACTGCCCAAACTTCCATTTGCCGA...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GCTGGCCACAGGCTTGTCTGTGGAGGCGCTCTGCTGAAAGCACGAGCGCTCTGTAACAGCTGCTGGACATaGTTGTATGAATTCTTCACA +
Preference number: 5 (lower is better)
Translates to: AGHRLVCGGALLKARALCNSCWT*LYEFFT
Trigger: TGTGAAGAATTCATACAACAATGTCCAGCAGCTGTT...ACAGAGCGCTCGTGCTTTCAGCAGAGCGCCTCCACAGACAAGCCTGTGGCCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATATGCACGGCTCGGCCGTaGTTATGGAAAAGACAAGTG +
Preference number: 5 (lower is better)
Translates to: KQGNCLRALTSRVDLHPICTARP*LWKRQV
Trigger: CACTTGTCTTTTCCATAACAACGGCCGAGCCGTGCA...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCTTCCGCTCTGCTTCATaGCGGAAGCGTCTTCGGATG +
Preference number: 5 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGFRSAS*RKRLRM
Trigger: CATCCGAAGACGCTTCCGCAATGAAGCAGAGCGGAA...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGCTGCTGGCTACATTATaGCTGTCTGGAGAGCGGGTT +
Preference number: 5 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTLLATL*LSGERV
Trigger: AACCCGCTCTCCAGACAGCAATAATGTAGCCAGCAG...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAACTCGGATGGCAAATTTaGGCAGAGCAGTTCCAACAG +
Preference number: 5 (lower is better)
Translates to: QSRGTACGHSPPELTCIQLGWQI*AEQFQQ
Trigger: CTGTTGGAACTGCTCTGCCAAAATTTGCCATCCGAG...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTACAGCTCCCTGTGAATTaGAAGGTTGGTATTGTCCAG +
Preference number: 5 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLQLPVN*KVGIVQ
Trigger: CTGGACAATACCAACCTTCAAATTCACAGGGAGCTG...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACATTCGGGGCGAAGATATaGAGCAGGGCCATGCGGCAG +
Preference number: 5 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTFGAKI*SRAMRQ
Trigger: CTGCCGCATGGCCCTGCTCAATATCTTCGCCCCGAA...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGTTCGGGGCGAAGATATaGAGCAGGGCCATGCGGCAG +
Preference number: 5 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKFGAKI*SRAMRQ
Trigger: CTGCCGCATGGCCCTGCTCAATATCTTCGCCCCGAA...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp ACGAGCGCTCTGTGTGGCCGAGGTCATTGTACCCCCGGCTTCCTGCTGGGTGGTAAATTCACGTCCATGTaGACTTTGGATTCGGAAATT +
Preference number: 5 (lower is better)
Translates to: TSALCGRGHCTPGFLLGGKFTSM*TLDSEI
Trigger: AATTTCCGAATCCAAAGTCAACATGGACGTGAATTT...ACCACCCAGCAGGAAGCCGGGGGTACAATGACCTCGGCCACACAGAGCGCTCGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTCCATTTCGCTTCACTTaGTGGCCGAGGCCATATACG +
Preference number: 5 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLPFRFT*WPRPYT
Trigger: CGTATATGGCCTCGGCCACAAAGTGAAGCGAAATGG...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGTGGGCGTTGCAGGCCTaGCGGATGGCGCCTCTGACT +
Preference number: 5 (lower is better)
Translates to: GILSIMVLDAFPKSYREEWALQA*RMAPLT
Trigger: AGTCAGAGGCGCCATCCGCAAGGCCTGCAACGCCCA...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATGTCAAACTTGGGCTTaGGCACGCCATACTTCCTCA +
Preference number: 5 (lower is better)
Translates to: QSRGTACGHSPPELTCIQCQTWA*ARHTSS
Trigger: TGAGGAAGTATGGCGTGCCAAAGCCCAAGTTTGACA...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTTTGGTGATAGGCCGCTaGGTGCTCACCACCTTCACG +
Preference number: 5 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACLVIGR*VLTTFT
Trigger: CGTGAAGGTGGTGAGCACCAAGCGGCCTATCACCAA...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGTCCTTGGCGGGCGGCTaGGTGATAGGCCGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: GILSIMVLDAFPKSYREESLAGG*VIGRLV
Trigger: CACCAAGCGGCCTATCACCAAGCCGCCCGCCAAGGA...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATCCTTGGCGGGCGGCTaGGTGATAGGCCGCTTGGTG +
Preference number: 5 (lower is better)
Translates to: PASTLQNLLDSTHSKLPISLAGG*VIGRLV
Trigger: CACCAAGCGGCCTATCACCAAGCCGCCCGCCAAGGA...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCTGGCGGCATAGCTGGTaGATGTACTGCACAAGTGCC +
Preference number: 5 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSWRHSW*MYCTSA
Trigger: GGCACTTGTGCAGTACATCAACCAGCTATGCCGCCA...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCGTCTCCAGTGTGGTGTaGAGGGACTGCAGCAAGGCG +
Preference number: 5 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFVSSVV*RDCSKA
Trigger: CGCCTTGCTGCAGTCCCTCAACACCACACTGGAGAC...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CAA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATGGTTGCAGGCAAACTaGATGAACTTGCACAGCTCC +
Preference number: 5 (lower is better)
Translates to: QSRGTACGHSPPELTCIQWLQAN*MNLHSS
Trigger: GGAGCTGTGCAAGTTCATCAAGTTTGCCTGCAACCA...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGGATGCGCTCCTGGTaGCAGGCAAACTTGATGAAC +
Preference number: 5 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDGMRSW*QANLMN
Trigger: GTTCATCAAGTTTGCCTGCAACCAGGAGCGCATCCC...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCCACGTGTTTGGGCAATaGGCCCAGCCACCTCTATGT +
Preference number: 5 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGHVFGQ*AQPPLC
Trigger: ACATAGAGGTGGCTGGGCCAATTGCCCAAACACGTG...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTGTGTGGCCCTTTCCCTaGTCCTACGTCACTGCAGGG +
Preference number: 5 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCVWPFP*SYVTAG
Trigger: CCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACAC...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS TCA 90 bp ACCTTCTGCTTCTTGGTCTGTTTCTCACTGGAGCTGGACTCGGTCTaGTTGCTCAAGCTACACAGTCGATCCATGAGCTGCACAAGGCCA +
Preference number: 5 (lower is better)
Translates to: TFCFLVCFSLELDSV*LLKLHSRSMSCTRP
Trigger: TGGCCTTGTGCAGCTCATGGATCGACTGTGTAGCTTGAGCAATCAGACCGAGTCCAGCTCCAGTGAGAAACAGACCAAGAAGCAGAAGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 90 bp TGTACCTCCACAACTGCAAGTCGCTCTCCTGTAGAGGGCACATGTTaGATCTGTGAAAACAACTCCCGCAACTCCCAAGTGGGTGCTGAC +
Preference number: 5 (lower is better)
Translates to: CTSTTASRSPVEGTC*ICENNSRNSQVGAD
Trigger: GTCAGCACCCACTTGGGAGTTGCGGGAGTTGTTTTCACAGATTCAACATGTGCCCTCTACAGGAGAGCGACTTGCAGTTGTGGAGGTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552437.1
CDS GCA 90 bp TTGAGCAGGGCCAAAGTTTCCTCATCACCTGAACTTTCCCTTTCATaGTGTTCTTCTAAGGCCAGCTGGCGCTGGGCATTCCACAGTCCT +
Preference number: 5 (lower is better)
Translates to: LSRAKVSSSPELSLS*CSSKASWRWAFHSP
Trigger: AGGACTGTGGAATGCCCAGCGCCAGCTGGCCTTAGAAGAACAGCATGAAAGGGAAAGTTCAGGTGATGAGGAAACTTTGGCCCTGCTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp CTCCTGAGGGATGTCATCATCGTCATCATCATCGCTTTCATCATCTaGAATGGGAGGCGGGTGAGGGTCTGGGCCAGAGGTGATGAAATT +
Preference number: 5 (lower is better)
Translates to: LLRDVIIVIIIAFII*NGRRVRVWARGDEI
Trigger: AATTTCATCACCTCTGGCCCAGACCCTCACCCGCCTCCCATTGCAGATGATGAAAGCGATGATGATGACGATGATGACATCCCTCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp CCTCCGAAGACTCCTGAGCGCGAACTGTGCAAGCAAAGCCCCACATaGCTTTATCAGGAGTGTTGTGTTCACGGCCACTTCTCATTTCAA +
Preference number: 5 (lower is better)
Translates to: PPKTPERELCKQSPT*LYQECCVHGHFSFQ
Trigger: TTGAAATGAGAAGTGGCCGTGAACACAACACTCCTGATAAAGCCATGTGGGGCTTTGCTTGCACAGTTCGCGCTCAGGAGTCTTCGGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS-3UTR CAA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAGGCAAATTTGATCTTTaGGAGCCATCAACAACTGCC +
Preference number: 5 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLGKFDL*EPSTTA
Trigger: GGCAGTTGTTGATGGCTCCAAAAGATCAAATTTGCC...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCAGCTGTTCAGCCAGGTaGGTTAGGATCACATCCCGT +
Preference number: 5 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSSCSAR*VRITSR
Trigger: ACGGGATGTGATCCTAACCAACCTGGCTGAACAGCT...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGCTTTATCAGGAGTGTaGTGTTCACGGCCACTTCTC +
Preference number: 5 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTALSGV*CSRPLL
Trigger: GAGAAGTGGCCGTGAACACAACACTCCTGATAAAGC...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CCACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTGTAATTTCTGGTCCATaGTACAGGATTCTTAACATG +
Preference number: 5 (lower is better)
Translates to: PHSKELWPLGRQRADHLLVISGP*YRILNM
Trigger: CATGTTAAGAATCCTGTACAATGGACCAGAAATTAC...AAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CACACTCAAAGGAGCTGTGGCCGCTGGGGAGGCAGCGGGCTGACCATCTTCTTTCTTTTCTCATTAGAATaGTACGTTCCTGAAGTGGGT +
Preference number: 5 (lower is better)
Translates to: HTQRSCGRWGGSGLTIFFLFSLE*YVPEVG
Trigger: ACCCACTTCAGGAACGTACAATTCTAATGAGAAAAG...AAAGAAGATGGTCAGCCCGCTGCCTCCCCAGCGGCCACAGCTCCTTTGAGTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGTCCTCTTTCAGTGTGTaGGAGATGGTGGAACCAGTC +
Preference number: 5 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTSSFSV*EMVEPV
Trigger: GACTGGTTCCACCATCTCCAACACACTGAAAGAGGA...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATAGCAGGGAGGCGATCTaGGAAGCTGGGTCGCTGGGA +
Preference number: 5 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDSREAI*EAGSLG
Trigger: TCCCAGCGACCCAGCTTCCAAGATCGCCTCCCTGCT...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACCTGACCCATCTCCTGTaGCAGGAAGTGAGGTGTGAA +
Preference number: 5 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDLTHLL*QEVRCE
Trigger: TTCACACCTCACTTCCTGCAACAGGAGATGGGTCAG...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAGGTGTCACTATCATATaGTTGCTGAGCGGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGGVTII*LLSGGH
Trigger: GTGGCCACCGCTCAGCAACAATATGATAGTGACACC...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCACCATTTCGCTTCACTTaGTGGCCGAGGCCATATACG +
Preference number: 5 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSPFRFT*WPRPYT
Trigger: CGTATATGGCCTCGGCCACAAAGTGAAGCGAAATGG...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTGGAGACACCCCCAGTTaGATGTGGACCCTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTAGDTPS*MWTLSV
Trigger: CACAGACAGGGTCCACATCAAACTGGGGGTGTCTCC...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTCCTCGGCCTTGTCTTTaGGCTTCTTGGTGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLPRPCL*ASWCLL
Trigger: AAGAAGACACCAAGAAGCCAAAAGACAAGGCCGAGG...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACGAGGCCGTCTCTGCATaGTCCAGGGGCTCCCCCAGG +
Preference number: 5 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNEAVSA*SRGSPR
Trigger: CCTGGGGGAGCCCCTGGACAATGCAGAGACGGCCTC...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGTGCTCCTTCCCGGCCTaGCTGTACTTGCTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRCSFPA*LYLLLS
Trigger: TGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGCA...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGGTCCTGCTGACGCTGTaGAGCACAGCCTTGTCCTTG +
Preference number: 5 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKVLLTL*STALSL
Trigger: CAAGGACAAGGCTGTGCTCAACAGCGTCAGCAGGAC...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGGACGTCTGCCCGAATaGCAATCCCCAGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDGRLPE*QSPAAA
Trigger: GGCAGCTGCTGGGGATTGCAATTCGGGCAGACGTCC...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACAGCTCGGTCTCATCATaGATGCTCTCAAACTTCTTG +
Preference number: 5 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDSSVSS*MLSNFL
Trigger: CAAGAAGTTTGAGAGCATCAATGATGAGACCGAGCT...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTCCATCAGCCCCACTaGGTACATGGTGTGGGCCTT +
Preference number: 5 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTALHQPH*VHGVGL
Trigger: AAGGCCCACACCATGTACCAAGTGGGGCTGATGGAG...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTTGGTTGCAGGCAAACTaGATGAACTTGCACAGCTCC +
Preference number: 5 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLWLQAN*MNLHSS
Trigger: GGAGCTGTGCAAGTTCATCAAGTTTGCCTGCAACCA...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGCCTCAGTCCACTCTTTaGAAAATGGGTGTGGCCCTT +
Preference number: 5 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTPQSTL*KMGVAL
Trigger: AAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGG...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGCACATCTTCTTTCTaGGACCAGCATCCACACTCC +
Preference number: 5 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDGTSSF*DQHPHS
Trigger: GGAGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCC...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCGGCACATCTTCTTTCTaGGACCAGCATCCACACTCC +
Preference number: 5 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSGTSSF*DQHPHS
Trigger: GGAGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCC...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCTCTGGCCCTGGTGTCTaGCAGGTCACCTCTCTCTTC +
Preference number: 5 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFSGPGV*QVTSLF
Trigger: GAAGAGAGAGGTGACCTGCAAGACACCAGGGCCAGA...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS GCA 90 bp CCTTCACCAAGTCTTTCGGCCAACCAGTTCCTAAGACACTACGGCTaGCATATCCCAGTGTGTTGCCTCCATATTCAGCAACCTTCCTAC +
Preference number: 5 (lower is better)
Translates to: PSPSLSANQFLRHYG*HIPVCCLHIQQPSY
Trigger: GTAGGAAGGTTGCTGAATATGGAGGCAACACACTGGGATATGGCAGCCGTAGTGTCTTAGGAACTGGTTGGCCGAAAGACTTGGTGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000682272.1
CDS GCA 90 bp CTGAACCTCGGATCCTATCTTGATTGTCTCTTTGAAGCCTCCAAGTaGACACAGTGCGGCAACGGCCTGGCGTGCAATTCTCTGAAGTTT +
Preference number: 5 (lower is better)
Translates to: LNLGSYLDCLFEASK*TQCGNGLACNSLKF
Trigger: AAACTTCAGAGAATTGCACGCCAGGCCGTTGCCGCACTGTGTGCACTTGGAGGCTTCAAAGAGACAATCAAGATAGGATCCGAGGTTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp ATGTCAGAGACTCTGATGGGCTTCGCTGGTGTCAGGCTCAGCGTCTaGTCTGAATGGGCACAACTCTTAAATATCTCCGTCAGAACCTCT +
Preference number: 5 (lower is better)
Translates to: MSETLMGFAGVRLSV*SEWAQLLNISVRTS
Trigger: AGAGGTTCTGACGGAGATATTTAAGAGTTGTGCCCATTCAGAGCAGACGCTGAGCCTGACACCAGCGAAGCCCATCAGAGTCTCTGACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp CCTCATCACTGCCAAATCGGTTGTTTTGGAGCTGTTCAGCCAGGTTaGTTAGGATCACATCCCGTAGCTGGGAGAGTCCACTGTTTCTCT +
Preference number: 5 (lower is better)
Translates to: PHHCQIGCFGAVQPG*LGSHPVAGRVHCFS
Trigger: AGAGAAACAGTGGACTCTCCCAGCTACGGGATGTGATCCTAACCAACCTGGCTGAACAGCTCCAAAACAACCGATTTGGCAGTGATGAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp AGCAATGGCTGGAGGACTTCATGGGATGACTGGTCTTCCCGCTTGTaGATAAATATCGAGAGCTTGCCATCCACAGCCTCACTCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SNGWRTSWDDWSSRL*INIESLPSTASLSS
Trigger: AGAAGAGAGTGAGGCTGTGGATGGCAAGCTCTCGATATTTATCCACAAGCGGGAAGACCAGTCATCCCATGAAGTCCTCCAGCCATTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp CACCCTTGGTCATGTCTCGATCCATCTTCACAACTTTCTCCATGTTaGCGCCAGTACCAAGTCGGAAGGGCCGTCCTTCTGAACTACTTA +
Preference number: 5 (lower is better)
Translates to: HPWSCLDPSSQLSPC*RQYQVGRAVLLNYL
Trigger: TAAGTAGTTCAGAAGGACGGCCCTTCCGACTTGGTACTGGCGCCAACATGGAGAAAGTTGTGAAGATGGATCGAGACATGACCAAGGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp GGGAGAGAGTCACGTCTAAGCGAACGCTCTTCCACTGTAACAAACTaGAGCCATTATAGTGCACGGCTCGGCCGTTGTTATGGAAAAGAC +
Preference number: 5 (lower is better)
Translates to: GRESRLSERSSTVTN*SHYSARLGRCYGKD
Trigger: GTCTTTTCCATAACAACGGCCGAGCCGTGCACTATAATGGCTCCAGTTTGTTACAGTGGAAGAGCGTTCGCTTAGACGTGACTCTCTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp GCCAGGAGCATCCCTCTATTCTTTCATGACAACCTCAGATCTACCTaGATGGTCATTACTCCCCGACGTACTCCAGGCTGTACCTTGAGT +
Preference number: 5 (lower is better)
Translates to: ARSIPLFFHDNLRST*MVITPRRTPGCTLS
Trigger: ACTCAAGGTACAGCCTGGAGTACGTCGGGGAGTAATGACCATCCAGGTAGATCTGAGGTTGTCATGAAAGAATAGAGGGATGCTCCTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS-3UTR CAA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATTGGTGGCAAGAAGATaGAGTTGGTGTATGCACATC +
Preference number: 5 (lower is better)
Translates to: QSRGTACGHSPPELTCIQLVARR*SWCMHI
Trigger: GATGTGCATACACCAACTCAATCTTCTTGCCACCAA...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CTCCCGAGGAGGCCTCAGATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACCAGGCTTCTTCTTCTTaGGTAATTTCTGGTCCATTG +
Preference number: 5 (lower is better)
Translates to: LPRRPQMKTVRPGPKETDQASSS*VISGPL
Trigger: CAATGGACCAGAAATTACCAAAGAAGAAGAAGCCTG...GTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATCTGAGGCCTCCTCGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGCACTCAACACAGCGGTaGGCAAGCACCTGGAAGGCA +
Preference number: 5 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTHSTQR*ASTWKA
Trigger: TGCCTTCCAGGTGCTTGCCAACCGCTGTGTTGAGTG...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAGCAGGGAGGCGATCTaGGAAGCTGGGTCGCTGGGA +
Preference number: 5 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSSREAI*EAGSLG
Trigger: TCCCAGCGACCCAGCTTCCAAGATCGCCTCCCTGCT...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTTCGCAACAGCCACCCTaGGTCATGTCTCGATCCATC +
Preference number: 5 (lower is better)
Translates to: WSLMHFLRVTGRRWMLTASQQPP*VMSRSI
Trigger: GATGGATCGAGACATGACCAAGGGTGGCTGTTGCGA...AGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCTCGCAACAGCCACCCTaGGTCATGTCTCGATCCATC +
Preference number: 5 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSSQQPP*VMSRSI
Trigger: GATGGATCGAGACATGACCAAGGGTGGCTGTTGCGA...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGCTCACAGTCTCTGGGTaGATAGACTCTACAGGTGGC +
Preference number: 5 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRLTVSG*IDSTGG
Trigger: GCCACCTGTAGAGTCTATCAACCCAGAGACTGTGAG...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGCTCCAAGTAATCTCTTaGGGCTGTCTTCGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLLQVIS*GCLRSA
Trigger: GGCTGACCGAAGACAGCCCAAAGAGATTACTTGGAG...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGTGCACGGCTCGGCCGTaGTTATGGAAAAGACAAGTG +
Preference number: 5 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRCTARP*LWKRQV
Trigger: CACTTGTCTTTTCCATAACAACGGCCGAGCCGTGCA...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAGTCACTATCATATTGTaGCTGAGCGGTGGCCACGGC +
Preference number: 5 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTVTIIL*LSGGHG
Trigger: GCCGTGGCCACCGCTCAGCAACAATATGATAGTGAC...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTGGTGTCACTATCATATaGTTGCTGAGCGGTGGCCAC +
Preference number: 5 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACGVTII*LLSGGH
Trigger: GTGGCCACCGCTCAGCAACAATATGATAGTGACACC...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTCTTTGGATTCGGAAATaGGGAACTCTTCGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTLWIRK*GTLRRG
Trigger: TCCCCTCCGAAGAGTTCCCAATTTCCGAATCCAAAG...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGGGAGACACCCCCAGTTaGATGTGGACCCTGTCTGTG +
Preference number: 5 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTGDTPS*MWTLSV
Trigger: CACAGACAGGGTCCACATCAAACTGGGGGTGTCTCC...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGCCTCGGCCTTGTCTTTaGGCTTCTTGGTGTCTTCTT +
Preference number: 5 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLPRPCL*ASWCLL
Trigger: AAGAAGACACCAAGAAGCCAAAAGACAAGGCCGAGG...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGTCCCCGCCCTCGGCCTaGTCTTTTGGCTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: GILSIMVLDAFPKSYREESPPSA*SFGFLV
Trigger: CACCAAGAAGCCAAAAGACAAGGCCGAGGGCGGGGA...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTGAGGTCGCTGACGGTTaGGGAGATGCCCTGCGAGCT +
Preference number: 5 (lower is better)
Translates to: FPKSYREEMDANGSISRIEVADG*GDALRA
Trigger: AGCTCGCAGGGCATCTCCCAAACCGTCAGCGACCTC...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCCGAATTTTCTCAATTTaGGCTCGGGATCTTATCTCC +
Preference number: 5 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTRIFSI*ARDLIS
Trigger: GGAGATAAGATCCCGAGCCAAAATTGAGAAAATTCG...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCTGTCAAACTTGGGCTTaGGCACGCCATACTTCCTCA +
Preference number: 5 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGCQTWA*ARHTSS
Trigger: TGAGGAAGTATGGCGTGCCAAAGCCCAAGTTTGACA...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGCCGGCCTTGCTGTACTaGCTCTTGTCAAACTTGGGC +
Preference number: 5 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKPALLY*LLSNLG
Trigger: GCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCGG...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCCCGGCCTTGCTGTACTaGCTCTTGTCAAACTTGGGC +
Preference number: 5 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSPALLY*LLSNLG
Trigger: GCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCGG...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCCTGTTGAGCACAGCCTaGTCCTTGGCGGGCGGCTTG +
Preference number: 5 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSLLSTA*SLAGGL
Trigger: CAAGCCGCCCGCCAAGGACAAGGCTGTGCTCAACAG...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGAGGCCCCCACCTCTTTTCTGGTGATTTaGGCTTCACAGTTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: RLESCAFLSTRVSEEAPTSFLVI*ASQLAS
Trigger: AGAAGCCAACTGTGAAGCCAAAATCACCAGAAAAGA...GGTGGGGGCCTCCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTGACGCTACGGATATCTaGCCTGGCTCGGTCAATAAC +
Preference number: 5 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACDATDI*PGSVNN
Trigger: GTTATTGACCGAGCCAGGCAAGATATCCGTAGCGTC...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCCCAGGGTCCACTTTCTaGAGGCCTTCTGTGCATGTC +
Preference number: 5 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSPGSTF*RPSVHV
Trigger: GACATGCACAGAAGGCCTCAAGAAAGTGGACCCTGG...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCCCAGGGTCCACTTTCTaGAGGCCTTCTGTGCATGTC +
Preference number: 5 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFPGSTF*RPSVHV
Trigger: GACATGCACAGAAGGCCTCAAGAAAGTGGACCCTGG...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CAA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTTGGCGGCATAGCTGGTaGATGTACTGCACAAGTGCC +
Preference number: 5 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCWRHSW*MYCTSA
Trigger: GGCACTTGTGCAGTACATCAACCAGCTATGCCGCCA...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCGGACGTCTGCCCGAATaGCAATCCCCAGCAGCTGCC +
Preference number: 5 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSGRLPE*QSPAAA
Trigger: GGCAGCTGCTGGGGATTGCAATTCGGGCAGACGTCC...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATTGGTTGCAGGCAAACTaGATGAACTTGCACAGCTCC +
Preference number: 5 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYWLQAN*MNLHSS
Trigger: GGAGCTGTGCAAGTTCATCAAGTTTGCCTGCAACCA...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGCACGTGTTTGGGCAATaGGCCCAGCCACCTCTATGT +
Preference number: 5 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKHVFGQ*AQPPLC
Trigger: ACATAGAGGTGGCTGGGCCAATTGCCCAAACACGTG...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCACCTCAGTCCACTCTTTaGAAAATGGGTGTGGCCCTT +
Preference number: 5 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSPQSTL*KMGVAL
Trigger: AAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGG...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTGGACAAAGACCTATTaGGGGCAAAGATGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLWTKTY*GQRCSG
Trigger: CCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCA...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGCAAGCATGCCAGCCTTaGAACTTGCTCAGCAAGAGT +
Preference number: 5 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLQACQP*NLLSKS
Trigger: ACTCTTGCTGAGCAAGTTCAAAGGCTGGCATGCTTG...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCCAAGCATGCCAGCCTTaGAACTTGCTCAGCAAGAGT +
Preference number: 5 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSQACQP*NLLSKS
Trigger: ACTCTTGCTGAGCAAGTTCAAAGGCTGGCATGCTTG...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS TCA 90 bp TCTGGAGAGCTGACAGAAATACGCAGTATTTCAGAGGGATCACACTaGGTCCCTAGGAGAAAAGGCTCCCATCCCAGCCAGCACAAGAAA +
Preference number: 5 (lower is better)
Translates to: SGELTEIRSISEGSH*VPRRKGSHPSQHKK
Trigger: TTTCTTGTGCTGGCTGGGATGGGAGCCTTTTCTCCTAGGGACTCAGTGTGATCCCTCTGAAATACTGCGTATTTCTGTCAGCTCTCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547352.1
CDS TCA 90 bp GGCTATAAATGTCCCCTCAGCCAGGAGCATCCCTCTATTCTTTCATaGCAACCTCAGATCTACCTGGATGGTCATTACTCCCCGACGTAC +
Preference number: 5 (lower is better)
Translates to: GYKCPLSQEHPSILS*QPQIYLDGHYSPTY
Trigger: GTACGTCGGGGAGTAATGACCATCCAGGTAGATCTGAGGTTGTCATGAAAGAATAGAGGGATGCTCCTGGCTGAGGGGACATTTATAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS GCA 90 bp CGGCCTGGCGTGCAATTCTCTGAAGTTTGGCAAGTTTCCTGCCACTaGTGCTGCCATTTTCCAGAATGCTTTCTGCGTATTTCCCCAATT +
Preference number: 5 (lower is better)
Translates to: RPGVQFSEVWQVSCH*CCHFPECFLRISPI
Trigger: AATTGGGGAAATACGCAGAAAGCATTCTGGAAAATGGCAGCAGCAGTGGCAGGAAACTTGCCAAACTTCAGAGAATTGCACGCCAGGCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp GGATCCTATCTTGATTGTCTCTTTGAAGCCTCCAAGTGCACACAGTaGGGCAACGGCCTGGCGTGCAATTCTCTGAAGTTTGGCAAGTTT +
Preference number: 5 (lower is better)
Translates to: GSYLDCLFEASKCTQ*GNGLACNSLKFGKF
Trigger: AAACTTGCCAAACTTCAGAGAATTGCACGCCAGGCCGTTGCCGCACTGTGTGCACTTGGAGGCTTCAAAGAGACAATCAAGATAGGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp ACTTCACCAAGTCTTTCGGCCAACCAGTTCCTAAGACACTACGGCTaGCATATCCCAGTGTGTTGCCTCCATATTCAGCAACCTTCCTAC +
Preference number: 5 (lower is better)
Translates to: TSPSLSANQFLRHYG*HIPVCCLHIQQPSY
Trigger: GTAGGAAGGTTGCTGAATATGGAGGCAACACACTGGGATATGGCAGCCGTAGTGTCTTAGGAACTGGTTGGCCGAAAGACTTGGTGAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550722.5
CDS GCA 90 bp ACGCACAGGATCAGTCCTGCAAGTGTCAACAGGAAAAAGTGTCAGTaGCCAGTGATGGTTAAGACTGCAGGGAAGTGGCTTTCAGGGTTA +
Preference number: 5 (lower is better)
Translates to: THRISPASVNRKKCQ*PVMVKTAGKWLSGL
Trigger: TAACCCTGAAAGCCACTTCCCTGCAGTCTTAACCATCACTGGGCACTGACACTTTTTCCTGTTGACACTTGCAGGACTGATCCTGTGCGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS CCA 90 bp TCAGCTACAGGCAGGGACCCTAGATCCGTCTGTTTCTGTAATAGATaGACTGTGTGGACGAAAGTTTTCAATGATCCCCTGGCACAAGCC +
Preference number: 5 (lower is better)
Translates to: SATGRDPRSVCFCNR*TVWTKVFNDPLAQA
Trigger: GGCTTGTGCCAGGGGATCATTGAAAACTTTCGTCCACACAGTCCATCTATTACAGAAACAGACGGATCTAGGGTCCCTGCCTGTAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp TCAGTCCTTGCAAGCTCCGAGTTCCTCTCTCGGCAAATGGAAGTTTaGGCAGTTTTCTTTTTGTCGCCTGTGGATAGTCCACTCACAGTC +
Preference number: 5 (lower is better)
Translates to: SVLASSEFLSRQMEV*AVFFLSPVDSPLTV
Trigger: GACTGTGAGTGGACTATCCACAGGCGACAAAAAGAAAACTGCCCAAACTTCCATTTGCCGAGAGAGGAACTCGGAGCTTGCAAGGACTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp CTAAGACGACTCCATGAAGCCCAAAGGTTTTCAGCATCCCTCGGATaGCAAATTTTGGCAGAGCAGTTCCAACAGCACTGCTGGCTACAT +
Preference number: 5 (lower is better)
Translates to: LRRLHEAQRFSASLG*QILAEQFQQHCWLH
Trigger: ATGTAGCCAGCAGTGCTGTTGGAACTGCTCTGCCAAAATTTGCCATCCGAGGGATGCTGAAAACCTTTGGGCTTCATGGAGTCGTCTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp GAACAGTTTGAACATGTCGGACAGAAAATAATGGTAGAGGTGGTGTaGTCTGAAGGCGGCCACAGCTTTGAGACTGGAGAGCCTACCATC +
Preference number: 5 (lower is better)
Translates to: EQFEHVGQKIMVEVV*SEGGHSFETGEPTI
Trigger: GATGGTAGGCTCTCCAGTCTCAAAGCTGTGGCCGCCTTCAGACCACACCACCTCTACCATTATTTTCTGTCCGACATGTTCAAACTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550968.5
CDS-3UTR CAA 90 bp CCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAAGGGCCATTTCTGAGCATTTTGACATAATGGAAGGCTaGATTCCCAGGGTTACACCA +
Preference number: 5 (lower is better)
Translates to: PFPCPTSLQGGRAISEHFDIMEG*IPRVTP
Trigger: TGGTGTAACCCTGGGAATCAAGCCTTCCATTATGTC...AAAATGCTCAGAAATGGCCCTTCCTCCCTGCAGTGACGTAGGACAAGGGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCGATGATGTGCTTCAATaGGATGCTGCTTGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSDDVLQ*DAACPR
Trigger: TCTTGGGCAAGCAGCATCCAATTGAAGCACATCATC...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTTCACTGCCAAATCGGTaGTTTTGGAGCTGTTCAGCC +
Preference number: 5 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACSLPNR*FWSCSA
Trigger: GGCTGAACAGCTCCAAAACAACCGATTTGGCAGTGA...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TTGAGTGTCTGGGTCACTAAAGCAGACCCCAAATTGAGCAGAGCACCTCAGTCCACATCCAGTCAGGATTaGGGTGGCAAGAGCCAAAAT +
Preference number: 5 (lower is better)
Translates to: LSVWVTKADPKLSRAPQSTSSQD*GGKSQN
Trigger: ATTTTGGCTCTTGCCACCCAAATCCTGACTGGATGT...GGACTGAGGTGCTCTGCTCAATTTGGGGTCTGCTTTAGTGACCCAGACACTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCACATCCAGTCAGGATTaGGGTGGCAAGAGCCAAAAT +
Preference number: 5 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSTSSQD*GGKSQN
Trigger: ATTTTGGCTCTTGCCACCCAAATCCTGACTGGATGT...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGAAAGTTTCAATTCCATaGAGACAGTCAGCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTKVSIP*RQSAGS
Trigger: GGAGCCTGCTGACTGTCTCAATGGAATTGAAACTTT...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGGCCACCTTCTGCTTCTaGGTCTGTTTCTCACTGGAG +
Preference number: 5 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTATFCF*VCFSLE
Trigger: CTCCAGTGAGAAACAGACCAAGAAGCAGAAGGTGGC...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGCATAATCTGCCAGCTTaGCTAAGAGCAGGGAGGCGA +
Preference number: 5 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTHNLPA*LRAGRR
Trigger: TCGCCTCCCTGCTCTTAGCAAAGCTGGCAGATTATG...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGGACTGGTCTTCCCGCTaGTGGATAAATATCGAGAGC +
Preference number: 5 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRDWSSR*WINIES
Trigger: GCTCTCGATATTTATCCACAAGCGGGAAGACCAGTC...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAACAACTTTCTCCATGTaGGCGCCAGTACCAAGTCGG +
Preference number: 5 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTTTFSM*APVPSR
Trigger: CCGACTTGGTACTGGCGCCAACATGGAGAAAGTTGT...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATATGGTAGGAAAAACCTaGGTCTCCCATGCTTTCACC +
Preference number: 5 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYMVGKT*VSHAFT
Trigger: GGTGAAAGCATGGGAGACCAAGGTTTTTCCTACCAT...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GTCTGGACCTCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTGAAGATAAAGGTCTCTaGGGATGCCACCATTCTCTT +
Preference number: 5 (lower is better)
Translates to: VWTSMCSRRSSHVSSRYLEDKGL*GCHHSL
Trigger: AAGAGAATGGTGGCATCCCAAGAGACCTTTATCTTC...AAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGAGGTCCAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGACGTCCATGTTGACTTaGGATTCGGAAATTGGGAAC +
Preference number: 5 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTTSMLT*DSEIGN
Trigger: GTTCCCAATTTCCGAATCCAAAGTCAACATGGACGT...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGTTGCTCTTGTCAAACTaGGGCTTTGGCACGCCATAC +
Preference number: 5 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLLLLSN*GFGTPY
Trigger: GTATGGCGTGCCAAAGCCCAAGTTTGACAAGAGCAA...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GTGAATGGCACAACGAAGTTTCTCCAGCATGATTTCCAGAGAGGAGTACTGGGGTTGCTCTTGTCAAACTaGGGCTTTGGCACGCCATAC +
Preference number: 5 (lower is better)
Translates to: VNGTTKFLQHDFQRGVLGLLLSN*GFGTPY
Trigger: GTATGGCGTGCCAAAGCCCAAGTTTGACAAGAGCAA...CCCCAGTACTCCTCTCTGGAAATCATGCTGGAGAAACTTCGTTGTGCCATTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CAA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCGACGCTACGGATATCTaGCCTGGCTCGGTCAATAAC +
Preference number: 5 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFDATDI*PGSVNN
Trigger: GTTATTGACCGAGCCAGGCAAGATATCCGTAGCGTC...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CAA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATAAGCTCGGTCTCATCATaGATGCTCTCAAACTTCTTG +
Preference number: 5 (lower is better)
Translates to: KQGNCLRALTSRVDLHPISSVSS*MLSNFL
Trigger: CAAGAAGTTTGAGAGCATCAATGATGAGACCGAGCT...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATCACTCACCTCCAGAGTaGACTTGCATCCAATACAAC +
Preference number: 5 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYHSPPE*TCIQYN
Trigger: GTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTG...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CCAGAAGAACTCGATGTGCTGGTCCGTCTCCATCAGCCCCACTTGGTACATGGTCAGATACCTTACAGCTaGTCATCTACTCAAGTGATG +
Preference number: 5 (lower is better)
Translates to: PEELDVLVRLHQPHLVHGQIPYS*SSTQVM
Trigger: CATCACTTGAGTAGATGACAAGCTGTAAGGTATCTG...ACCATGTACCAAGTGGGGCTGATGGAGACGGACCAGCACATCGAGTTCTTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS-3UTR CAA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCCTGCTACATGAAAGGTaGAGGTGGGGTGGCATCTTC +
Preference number: 5 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFLLHER*RWGGIF
Trigger: GAAGATGCCACCCCACCTCAACCTTTCATGTAGCAG...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS TCA 90 bp CTGCTGTTGTGGTCCATATTTGAGCAGCATTTGATTCAGGTGCCATaGGCAAGCTATGTAGCAAGGCGATCACTTCTGCAGCCATGCTGT +
Preference number: 5 (lower is better)
Translates to: LLLWSIFEQHLIQVP*ASYVARRSLLQPCC
Trigger: ACAGCATGGCTGCAGAAGTGATCGCCTTGCTACATAGCTTGCTCATGGCACCTGAATCAAATGCTGCTCAAATATGGACCACAACAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp CCTGGCGTGCAATTCTCTGAAGTTTGGCAAGTTTCCTGCCACTGCTaGTGCCATTTTCCAGAATGCTTTCTGCGTATTTCCCCAATTGTG +
Preference number: 5 (lower is better)
Translates to: PGVQFSEVWQVSCHC*CHFPECFLRISPIV
Trigger: CACAATTGGGGAAATACGCAGAAAGCATTCTGGAAAATGGCAGCAGCAGTGGCAGGAAACTTGCCAAACTTCAGAGAATTGCACGCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp AGGTCTAGCACGCCCAGAAATTTCCCTGAGCTTTATCATGATTCCTaGAGGCAGTCTGATCCGAGGCAGATCAAAGTAGTTTCCAACAGG +
Preference number: 5 (lower is better)
Translates to: RSSTPRNFPELYHDS*RQSDPRQIKVVSNR
Trigger: CCTGTTGGAAACTACTTTGATCTGCCTCGGATCAGACTGCCTCCAGGAATCATGATAAAGCTCAGGGAAATTTCTGGGCGTGCTAGACCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp ATTCCATTGAGACAGTCAGCAGGCTCCTTGGTCAAGCTCAAAGGCTaGCAGTCACGAAGGCAGTTCAATAGCACCTCAGCAGTTATGTTA +
Preference number: 5 (lower is better)
Translates to: IPLRQSAGSLVKLKG*QSRRQFNSTSAVML
Trigger: TAACATAACTGCTGAGGTGCTATTGAACTGCCTTCGTGACTGCCAGCCTTTGAGCTTGACCAAGGAGCCTGCTGACTGTCTCAATGGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp CCTTCTGAACTACTTAGCAATGGCTGGAGGACTTCATGGGATGACTaGTCTTCCCGCTTGTGGATAAATATCGAGAGCTTGCCATCCACA +
Preference number: 5 (lower is better)
Translates to: PSELLSNGWRTSWDD*SSRLWINIESLPST
Trigger: TGTGGATGGCAAGCTCTCGATATTTATCCACAAGCGGGAAGACCAGTCATCCCATGAAGTCCTCCAGCCATTGCTAAGTAGTTCAGAAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp ATCATCATCGCTTTCATCATCTGCAATGGGAGGCGGGTGAGGGTCTaGGCCAGAGGTGATGAAATTCTCATAGCTGAGCTCGACTTTATA +
Preference number: 5 (lower is better)
Translates to: IIIAFIICNGRRVRV*ARGDEILIAELDFI
Trigger: TATAAAGTCGAGCTCAGCTATGAGAATTTCATCACCTCTGGCCCAGACCCTCACCCGCCTCCCATTGCAGATGATGAAAGCGATGATGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp TCCATGAAGCCCAAAGGTTTTCAGCATCCCTCGGATGGCAAATTTTaGCAGAGCAGTTCCAACAGCACTGCTGGCTACATTATTGCTGTC +
Preference number: 5 (lower is better)
Translates to: SMKPKGFQHPSDGKF*QSSSNSTAGYIIAV
Trigger: GACAGCAATAATGTAGCCAGCAGTGCTGTTGGAACTGCTCTGCCAAAATTTGCCATCCGAGGGATGCTGAAAACCTTTGGGCTTCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 90 bp GCCCAAAGCAGTAAATGGCAAGTAGCAATTTGGGAGGCCAAGGTCTaGAGAGCTGACAGAAATACGCAGTATTTCAGAGGGATCACACTG +
Preference number: 5 (lower is better)
Translates to: AQSSKWQVAIWEAKV*RADRNTQYFRGITL
Trigger: CAGTGTGATCCCTCTGAAATACTGCGTATTTCTGTCAGCTCTCCAGACCTTGGCCTCCCAAATTGCTACTTGCCATTTACTGCTTTGGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547352.1
CDS-3UTR CAA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCATTGGAAGATTGGGGTaGGTGGCAAGAAGATTGAGT +
Preference number: 5 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGIGRLG*VARRLS
Trigger: ACTCAATCTTCTTGCCACCAACCCCAATCTTCCAAT...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGGATGATGTGCTTCAATaGGATGCTGCTTGCCCAAGA +
Preference number: 5 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRDDVLQ*DAACPR
Trigger: TCTTGGGCAAGCAGCATCCAATTGAAGCACATCATC...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGTCACTGCCAAATCGGTaGTTTTGGAGCTGTTCAGCC +
Preference number: 5 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKSLPNR*FWSCSA
Trigger: GGCTGAACAGCTCCAAAACAACCGATTTGGCAGTGA...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGGAGACAGTTTGGCACTaGGTGATTAAGATACAGGAT +
Preference number: 5 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTETVWH*VIKIQD
Trigger: ATCCTGTATCTTAATCACCAAGTGCCAAACTGTCTC...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGCCATATCCCAGTGTGTaGCCTCCATATTCAGCAACC +
Preference number: 5 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTPYPSV*PPYSAT
Trigger: GGTTGCTGAATATGGAGGCAACACACTGGGATATGG...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATCGATGTGAAGGGCGCTaGCTCAGGTTGCTGCAACAA +
Preference number: 5 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDRCEGR*LRLLQQ
Trigger: TTGTTGCAGCAACCTGAGCAAGCGCCCTTCACATCG...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACTCAGGGCAGCAAGCGTaGCTGACGGGGAGGCTCTAT +
Preference number: 5 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNSGQQA*LTGRLY
Trigger: ATAGAGCCTCCCCGTCAGCAACGCTTGCTGCCCTGA...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACATCCTCTTTCAGTGTGTaGGAGATGGTGGAACCAGTC +
Preference number: 5 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTSSFSV*EMVEPV
Trigger: GACTGGTTCCACCATCTCCAACACACTGAAAGAGGA...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACTCTTGGGACTGGTTTTaGTCAATGTGGTGTCAGGTT +
Preference number: 5 (lower is better)
Translates to: KVWKSKMLPTPHAGPWRDSWDWF*SMWCQV
Trigger: AACCTGACACCACATTGACAAAAACCAGTCCCAAGA...GTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCTGCGTATTTCCCCAATaGTGGAATGTACATCAGTGC +
Preference number: 5 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSCVFPQ*WNVHQC
Trigger: GCACTGATGTACATTCCACAATTGGGGAAATACGCA...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCACCTCGGATCCTATCTaGATTGTCTCTTTGAAGCCT +
Preference number: 5 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSTSDPI*IVSLKP
Trigger: AGGCTTCAAAGAGACAATCAAGATAGGATCCGAGGT...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATAATACCTTCCTGTTCATaGATAGAAGCCACTACTCCA +
Preference number: 5 (lower is better)
Translates to: KQGNCLRALTSRVDLHPIIPSCS*IEATTP
Trigger: TGGAGTAGTGGCTTCTATCAATGAACAGGAAGGTAT...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATGTCACTATCATATTGTaGCTGAGCGGTGGCCACGGC +
Preference number: 5 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNVTIIL*LSGGHG
Trigger: GCCGTGGCCACCGCTCAGCAACAATATGATAGTGAC...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAGAAGATAAAGGTCTCTaGGGATGCCACCATTCTCTT +
Preference number: 5 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGEDKGL*GCHHSL
Trigger: AAGAGAATGGTGGCATCCCAAGAGACCTTTATCTTC...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCCTTTGGATTCGGAAATaGGGAACTCTTCGGAGGGGA +
Preference number: 5 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSLWIRK*GTLRRG
Trigger: TCCCCTCCGAAGAGTTCCCAATTTCCGAATCCAAAG...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GCAAAGATGCAGTGGGTGAGCCTGGAGGCAGCTCAGCCCTGGCATACACACTTAAAATTCACGTCCATGTaGACTTTGGATTCGGAAATT +
Preference number: 5 (lower is better)
Translates to: AKMQWVSLEAAQPWHTHLKFTSM*TLDSEI
Trigger: AATTTCCGAATCCAAAGTCAACATGGACGTGAATTT...TAAGTGTGTATGCCAGGGCTGAGCTGCCTCCAGGCTCACCCACTGCATCTTTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CAAAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATTTGCGGAATCCAGATaGACTTTCTTTACAAGACAC +
Preference number: 5 (lower is better)
Translates to: QSRGTACGHSPPELTCIQFAESR*TFFTRH
Trigger: GTGTCTTGTAAAGAAAGTCAATCTGGATTCCGCAAA...TTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACTCCCCGCCCTCGGCCTaGTCTTTTGGCTTCTTGGTG +
Preference number: 5 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNSPPSA*SFGFLV
Trigger: CACCAAGAAGCCAAAAGACAAGGCCGAGGGCGGGGA...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGCCTGGGGTCTGGGAGTaGATCTGCTCTTTGCTAAGA +
Preference number: 5 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTPGVWE*ICSLLR
Trigger: TCTTAGCAAAGAGCAGATCAACTCCCAGACCCCAGG...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGTGGCGGCATAGCTGGTaGATGTACTGCACAAGTGCC +
Preference number: 5 (lower is better)
Translates to: GILSIMVLDAFPKSYREEWRHSW*MYCTSA
Trigger: GGCACTTGTGCAGTACATCAACCAGCTATGCCGCCA...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCGAGTACTGGGGAAGCTaGATCATGAACATGCAGGTC +
Preference number: 5 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSEYWGS*IMNMQV
Trigger: GACCTGCATGTTCATGATCAAGCTTCCCCAGTACTC...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAGAGTACTGGGGAAGCTaGATCATGAACATGCAGGTC +
Preference number: 5 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTEYWGS*IMNMQV
Trigger: GACCTGCATGTTCATGATCAAGCTTCCCCAGTACTC...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTTGGACAAAGACCTATTaGGGGCAAAGATGCAGTGGG +
Preference number: 5 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCWTKTY*GQRCSG
Trigger: CCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCA...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS TCA 90 bp TATAGAGTACCAGCTGCACTAGCTGAGGCATCAGGGCATCCGCCATaGTCAGAGTCTGTAAATTTGGATGCATCAAGGAGGTCAGTAACA +
Preference number: 5 (lower is better)
Translates to: YRVPAALAEASGHPP*SESVNLDASRRSVT
Trigger: TGTTACTGACCTCCTTGATGCATCCAAATTTACAGACTCTGATCATGGCGGATGCCCTGATGCCTCAGCTAGTGCAGCTGGTACTCTATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000547352.1
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp GGCGTGCAATTCTCTGAAGTTTGGCAAGTTTCCTGCCACTGCTGCTaGCATTTTCCAGAATGCTTTCTGCGTATTTCCCCAATTGTGGAA +
Preference number: 5 (lower is better)
Translates to: GVQFSEVWQVSCHCC*HFPECFLRISPIVE
Trigger: TTCCACAATTGGGGAAATACGCAGAAAGCATTCTGGAAAATGGCAGCAGCAGTGGCAGGAAACTTGCCAAACTTCAGAGAATTGCACGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp CTTGGGACTGGTTTTTGTCAATGTGGTGTCAGGTTCAGAAGCGGTTaGAGAAAGAACTGTCTGACATCCTGGAACCACATAATCTGCCAG +
Preference number: 5 (lower is better)
Translates to: LGTGFCQCGVRFRSG*RKNCLTSWNHIICQ
Trigger: CTGGCAGATTATGTGGTTCCAGGATGTCAGACAGTTCTTTCTCCAACCGCTTCTGAACCTGACACCACATTGACAAAAACCAGTCCCAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS-3UTR CAA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTGACATAATGGAAGGCTaGATTCCCAGGGTTACACCA +
Preference number: 5 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCDIMEG*IPRVTP
Trigger: TGGTGTAACCCTGGGAATCAAGCCTTCCATTATGTC...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCATGCAGCAGGCACAGTaGAAAGGAGCTTTTGAAAAT +
Preference number: 5 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSMQQAQ*KGAFEN
Trigger: ATTTTCAAAAGCTCCTTTCAACTGTGCCTGCTGCAT...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGTCAATGCAGCAGGCACAGTaGAAAGGAGCTTTTGAAAAT +
Preference number: 5 (lower is better)
Translates to: RALTSRVDLHPIQLMQLSMQQAQ*KGAFEN
Trigger: ATTTTCAAAAGCTCCTTTCAACTGTGCCTGCTGCAT...TGACAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTTCAGAGTCTGTAAATTaGGATGCATCAAGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTSESVN*DASRRS
Trigger: TGACCTCCTTGATGCATCCAAATTTACAGACTCTGA...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATGCCACCTTCTGCTTCTaGGTCTGTTTCTCACTGGAG +
Preference number: 5 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNATFCF*VCFSLE
Trigger: CTCCAGTGAGAAACAGACCAAGAAGCAGAAGGTGGC...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATACATAATCTGCCAGCTTaGCTAAGAGCAGGGAGGCGA +
Preference number: 5 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIHNLPA*LRAGRR
Trigger: TCGCCTCCCTGCTCTTAGCAAAGCTGGCAGATTATG...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTGAACCTTCTCTGCTGTaGTGGTCCATATTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCEPSLL*WSIFEQ
Trigger: CTGCTCAAATATGGACCACAACAGCAGAGAAGGTTC...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCGAACCTTCTCTGCTGTaGTGGTCCATATTTGAGCAG +
Preference number: 5 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSEPSLL*WSIFEQ
Trigger: CTGCTCAAATATGGACCACAACAGCAGAGAAGGTTC...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTACCTCGGATCCTATCTaGATTGTCTCTTTGAAGCCT +
Preference number: 5 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACTSDPI*IVSLKP
Trigger: AGGCTTCAAAGAGACAATCAAGATAGGATCCGAGGT...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATACTGACCCATCTCCTGTaGCAGGAAGTGAGGTGTGAA +
Preference number: 5 (lower is better)
Translates to: PASTLQNLLDSTHSKLPILTHLL*QEVRCE
Trigger: TTCACACCTCACTTCCTGCAACAGGAGATGGGTCAG...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAGCAGGGGAACTGCTTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATAAACAGCTGCTGGACATaGTTGTATGAATTCTTCACA +
Preference number: 5 (lower is better)
Translates to: KQGNCLRALTSRVDLHPINSCWT*LYEFFT
Trigger: TGTGAAGAATTCATACAACAATGTCCAGCAGCTGTT...TATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAAGCAGTTCCCCTGCTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATTGCACGGCTCGGCCGTaGTTATGGAAAAGACAAGTG +
Preference number: 5 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDCTARP*LWKRQV
Trigger: CACTTGTCTTTTCCATAACAACGGCCGAGCCGTGCA...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCCAGCTCCCTGTGAATTaGAAGGTTGGTATTGTCCAG +
Preference number: 5 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSQLPVN*KVGIVQ
Trigger: CTGGACAATACCAACCTTCAAATTCACAGGGAGCTG...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGCAGCTCCCTGTGAATTaGAAGGTTGGTATTGTCCAG +
Preference number: 5 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKQLPVN*KVGIVQ
Trigger: CTGGACAATACCAACCTTCAAATTCACAGGGAGCTG...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGTGATTCTGTGAGACCTGGCAAGGCCCAAAGTGACAGTGTCCAACAAGATGGCCGAATTTTCTCAATTTaGGCTCGGGATCTTATCTCC +
Preference number: 5 (lower is better)
Translates to: CDSVRPGKAQSDSVQQDGRIFSI*ARDLIS
Trigger: GGAGATAAGATCCCGAGCCAAAATTGAGAAAATTCG...GCCATCTTGTTGGACACTGTCACTTTGGGCCTTGCCAGGTCTCACAGAATCACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTTTGCTGTACTTGCTCTaGTCAAACTTGGGCTTTGGC +
Preference number: 5 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCLLYLL*SNLGFG
Trigger: GCCAAAGCCCAAGTTTGACAAGAGCAAGTACAGCAA...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCATTTTGGCTTCACAGTaGGCTTCTTCTCACTTAAGG +
Preference number: 5 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSILASQ*ASSHLR
Trigger: CCTTAAGTGAGAAGAAGCCAACTGTGAAGCCAAAAT...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTGGGACTTCTTGTTTTTaGGTAGGTGACTTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACGTSCF*VGDFSG
Trigger: CCCAGAAAAGTCACCTACCAAAAAACAAGAAGTCCC...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGTGGCGGCATAGCTGGTaGATGTACTGCACAAGTGCC +
Preference number: 5 (lower is better)
Translates to: VCTHVSVYMSREKSGRREWRHSW*MYCTSA
Trigger: GGCACTTGTGCAGTACATCAACCAGCTATGCCGCCA...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CAA 90 bp AAGTTTGGAAAAGCAAAATGTTGCCAACTCCTCACGCAGGGCCCTGGAGGGACGAATGTGGACGAAAGTTaGGAAAAGCAAAATGTTGCC +
Preference number: 5 (lower is better)
Translates to: KFGKAKCCQLLTQGPGGTNVDES*EKQNVA
Trigger: GGCAACATTTTGCTTTTCCAAACTTTCGTCCACATT...CGTCCCTCCAGGGCCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCAAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TTTTGTGGGGTAGGCTTGAATCATGTGCTTTCCTCTCAACCAGAGTCTCGGAGGACCTCCAGAGTTGACTaGCATCCAATACAACTGATG +
Preference number: 5 (lower is better)
Translates to: FCGVGLNHVLSSQPESRRTSRVD*HPIQLM
Trigger: CATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGT...CCTCCGAGACTCTGGTTGAGAGGAAAGCACATGATTCAAGCCTACCCCACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS TCA 90 bp ACCTGCACCAGTTCATTCACTGAATCAACATCTAAGACGACTCCATaGAGCCCAAAGGTTTTCAGCATCCCTCGGATGGCAAATTTTGGC +
Preference number: 5 (lower is better)
Translates to: TCTSSFTESTSKTTP*SPKVFSIPRMANFG
Trigger: GCCAAAATTTGCCATCCGAGGGATGCTGAAAACCTTTGGGCTTCATGGAGTCGTCTTAGATGTTGATTCAGTGAATGAACTGGTGCAGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 90 bp CAGAATGGCTGTTCACTCACTGAATCAACATCTAAGACGACTCCATaGAGCCCAAAGGTTTTCAGCATCCCTCGGATGGCAAATTTTGGC +
Preference number: 5 (lower is better)
Translates to: QNGCSLTESTSKTTP*SPKVFSIPRMANFG
Trigger: GCCAAAATTTGCCATCCGAGGGATGCTGAAAACCTTTGGGCTTCATGGAGTCGTCTTAGATGTTGATTCAGTGAGTGAACAGCCATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550968.5
CDS GCA 90 bp GTGAATAGAGAGACTTCCCTCCTGAGGAAGCAACATGGACTGGACTaGCTGTACTACCTTCTCAGTAATGGACAGTTTATGAAGAGGCAA +
Preference number: 5 (lower is better)
Translates to: VNRETSLLRKQHGLD*LYYLLSNGQFMKRQ
Trigger: TTGCCTCTTCATAAACTGTCCATTACTGAGAAGGTAGTACAGGCAGTCCAGTCCATGTTGCTTCCTCAGGAGGGAAGTCTCTCTATTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp TGGCAGAGCAGTTCCAACAGCACTGCTGGCTACATTATTGCTGTCTaGAGAGCGGGTTACTACTGTGAGACCTTTTCGAACTTTATCAAT +
Preference number: 5 (lower is better)
Translates to: WQSSSNSTAGYIIAV*RAGYYCETFSNFIN
Trigger: ATTGATAAAGTTCGAAAAGGTCTCACAGTAGTAACCCGCTCTCCAGACAGCAATAATGTAGCCAGCAGTGCTGTTGGAACTGCTCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS-3UTR CAA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAGATCGATATAGTCATTaGAGCATGTCCATAGCATGT +
Preference number: 5 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGDRYSH*SMSIAC
Trigger: ACATGCTATGGACATGCTCAAATGACTATATCGATC...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GATGAAAACTGTCAGACCAGGGCCCAAAGAGACAGACGGCAGATAGGGAGGTATGATCGATATAGTCATTaGAGCATGTCCATAGCATGT +
Preference number: 5 (lower is better)
Translates to: DENCQTRAQRDRRQIGRYDRYSH*SMSIAC
Trigger: ACATGCTATGGACATGCTCAAATGACTATATCGATC...ATACCTCCCTATCTGCCGTCTGTCTCTTTGGGCCCTGGTCTGACAGTTTTCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCTTGGTGGCAAGAAGATaGAGTTGGTGTATGCACATC +
Preference number: 5 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSLVARR*SWCMHI
Trigger: GATGTGCATACACCAACTCAATCTTCTTGCCACCAA...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGGGCAAATTTGATCTTTaGGAGCCATCAACAACTGCC +
Preference number: 5 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKGKFDL*EPSTTA
Trigger: GGCAGTTGTTGATGGCTCCAAAAGATCAAATTTGCC...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCAGTGGGTGAGCCTGTCAGAGTCTGTAAATTaGGATGCATCAAGGAGGTCA +
Preference number: 5 (lower is better)
Translates to: KVPLDKDLFGAKMQWVSLSESVN*DASRRS
Trigger: TGACCTCCTTGATGCATCCAAATTTACAGACTCTGA...CAGGCTCACCCACTGCATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp CAATCTTTCCAGCAGGCCAGGGCACATCTTCTTTCTTGGACCAGCATCCACACTCTTTTCTCATTAGAATaGTACGTTCCTGAAGTGGGT +
Preference number: 5 (lower is better)
Translates to: QSFQQARAHLLSWTSIHTLFSLE*YVPEVG
Trigger: ACCCACTTCAGGAACGTACAATTCTAATGAGAAAAG...AGTGTGGATGCTGGTCCAAGAAAGAAGATGTGCCCTGGCCTGCTGGAAAGATTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TTGCGGGCACTCACCTCCAGAGTTGACTTGCATCCAATACAACTGATGCAGCTGATCTCATTAATGCTTTaGGCAGATTCGCCCTCTTTT +
Preference number: 5 (lower is better)
Translates to: LRALTSRVDLHPIQLMQLISLML*ADSPSF
Trigger: AAAAGAGGGCGAATCTGCCAAAAGCATTAATGAGAT...CAGCTGCATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTGCCCGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATGACTGGTCTTCCCGCTaGTGGATAAATATCGAGAGC +
Preference number: 5 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNDWSSR*WINIES
Trigger: GCTCTCGATATTTATCCACAAGCGGGAAGACCAGTC...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGATCTTGATTGTCTCTTaGAAGCCTCCAAGTGCACAC +
Preference number: 5 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTILIVS*KPPSAH
Trigger: GTGTGCACTTGGAGGCTTCAAAGAGACAATCAAGAT...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGTTCCGCTCTGCTTCATaGCGGAAGCGTCTTCGGATG +
Preference number: 5 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMFRSAS*RKRLRM
Trigger: CATCCGAAGACGCTTCCGCAATGAAGCAGAGCGGAA...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATACTCGGATGGCAAATTTaGGCAGAGCAGTTCCAACAG +
Preference number: 5 (lower is better)
Translates to: PASTLQNLLDSTHSKLPILGWQI*AEQFQQ
Trigger: CTGTTGGAACTGCTCTGCCAAAATTTGCCATCCGAG...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACTGCTCCTTCCCGGCCTaGCTGTACTTGCTCTTGTCA +
Preference number: 5 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNCSFPA*LYLLLS
Trigger: TGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGCA...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCGGGACTTCTTGTTTTTaGGTAGGTGACTTTTCTGGG +
Preference number: 5 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFGTSCF*VGDFSG
Trigger: CCCAGAAAAGTCACCTACCAAAAAACAAGAAGTCCC...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CAA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCGACGCTACGGATATCTaGCCTGGCTCGGTCAATAAC +
Preference number: 5 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSDATDI*PGSVNN
Trigger: GTTATTGACCGAGCCAGGCAAGATATCCGTAGCGTC...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TCAATGTGCTCTCGGAGAAGCAGCCACGTTAGCAGCAGATACCTTACAGCTTGTAGGATATACTTGCCCTaGTTCTTATTGACAGCTGAG +
Preference number: 5 (lower is better)
Translates to: SMCSRRSSHVSSRYLTACRIYLP*FLLTAE
Trigger: CTCAGCTGTCAATAAGAACAAGGGCAAGTATATCCT...ACAAGCTGTAAGGTATCTGCTGCTAACGTGGCTGCTTCTCCGAGAGCACATTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTAGCTCGGTCTCATCATaGATGCTCTCAAACTTCTTG +
Preference number: 5 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCSSVSS*MLSNFL
Trigger: CAAGAAGTTTGAGAGCATCAATGATGAGACCGAGCT...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATAGAGTACTGGGGAAGCTaGATCATGAACATGCAGGTC +
Preference number: 5 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIEYWGS*IMNMQV
Trigger: GACCTGCATGTTCATGATCAAGCTTCCCCAGTACTC...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATTGGAAAAGCAAAATGTaGCCAACTCCTCACGCAGGG +
Preference number: 5 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDWKSKM*PTPHAG
Trigger: CCCTGCGTGAGGAGTTGGCAACATTTTGCTTTTCCA...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp ATCTACTCAAGTGATGGCCAACAGAAGCTTCTGAACTCCTCCTGGGGAGGTAGCAATGTGGACGAAAGTTaGGAAAAGCAAAATGTTGCC +
Preference number: 5 (lower is better)
Translates to: IYSSDGQQKLLNSSWGGSNVDES*EKQNVA
Trigger: GGCAACATTTTGCTTTTCCAAACTTTCGTCCACATT...GCTACCTCCCCAGGAGGAGTTCAGAAGCTTCTGTTGGCCATCACTTGAGTAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GAAACGTACAAAGACAAAAGGTTAAGTCTTCCAGGAGGCCCTGGAATGTGGACGACCTCCAGAGTTGACTaGCATCCAATACAACTGATG +
Preference number: 5 (lower is better)
Translates to: ETYKDKRLSLPGGPGMWTTSRVD*HPIQLM
Trigger: CATCAGTTGTATTGGATGCAAGTCAACTCTGGAGGT...CGTCCACATTCCAGGGCCTCCTGGAAGACTTAACCTTTTGTCTTTGTACGTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATACAAGCATGCCAGCCTTaGAACTTGCTCAGCAAGAGT +
Preference number: 5 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIQACQP*NLLSKS
Trigger: ACTCTTGCTGAGCAAGTTCAAAGGCTGGCATGCTTG...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS TCA 90 bp ATCAGTGCTCTAGACAGAACCTTCTCTGCTGTTGTGGTCCATATTTaGGCAGCATTTGATTCAGGTGCCATGAGCAAGCTATGTAGCAAG +
Preference number: 5 (lower is better)
Translates to: ISALDRTFSAVVVHI*AAFDSGAMSKLCSK
Trigger: CTTGCTACATAGCTTGCTCATGGCACCTGAATCAAATGCTGCTCAAATATGGACCACAACAGCAGAGAAGGTTCTGTCTAGAGCACTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp ACCTGCTGTAGCATTTCCAACACTTCATCACATCCAGTCAGGATTTaGGTGGCAAGAGCCAAAATACTGACTTTTAGCTCCTGTACCTTC +
Preference number: 5 (lower is better)
Translates to: TCCSISNTSSHPVRI*VARAKILTFSSCTF
Trigger: GAAGGTACAGGAGCTAAAAGTCAGTATTTTGGCTCTTGCCACCCAAATCCTGACTGGATGTGATGAAGTGTTGGAAATGCTACAGCAGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311694.7
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp CGAAGAGCATCTGCTATCAAATCTAAGGTACAGGCAGCGAGCTCCTaGGATATGGACCGTTTCTTTAAATTTATAGTTGTCTCTGACGGG +
Preference number: 5 (lower is better)
Translates to: RRASAIKSKVQAASS*DMDRFFKFIVVSDG
Trigger: CCCGTCAGAGACAACTATAAATTTAAAGAAACGGTCCATATCCCAGGAGCTCGCTGCCTGTACCTTAGATTTGATAGCAGATGCTCTTCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp GCTGCTGCCATTTTCCAGAATGCTTTCTGCGTATTTCCCCAATTGTaGAATGTACATCAGTGCTCTAGACAGAACCTTCTCTGCTGTTGT +
Preference number: 5 (lower is better)
Translates to: AAAIFQNAFCVFPQL*NVHQCSRQNLLCCC
Trigger: ACAACAGCAGAGAAGGTTCTGTCTAGAGCACTGATGTACATTCCACAATTGGGGAAATACGCAGAAAGCATTCTGGAAAATGGCAGCAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp ATAAGCCATGAGGATCAGGGAAAGACACTGCATTGCAACTATTCCTaGCTTTCAAGCACAAAACACCTCGAACCAACTTCACAGAGGCAA +
Preference number: 5 (lower is better)
Translates to: ISHEDQGKTLHCNYS*LSSTKHLEPTSQRQ
Trigger: TTGCCTCTGTGAAGTTGGTTCGAGGTGTTTTGTGCTTGAAAGCCAGGAATAGTTGCAATGCAGTGTCTTTCCCTGATCCTCATGGCTTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS-3UTR CAA 90 bp TCCCGACCGTCGAATGATGTCTCGATTCCTTTCAGTTTGTGGGCTGAAGAAAAAGGCAAATTTGATCTTTaGGAGCCATCAACAACTGCC +
Preference number: 5 (lower is better)
Translates to: SRPSNDVSIPFSLWAEEKGKFDL*EPSTTA
Trigger: GGCAGTTGTTGATGGCTCCAAAAGATCAAATTTGCC...TTTTTCTTCAGCCCACAAACTGAAAGGAATCGAGACATCATTCGACGGTCGGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550724.2
CDS-3UTR CAA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAGAGACAGTTTGGCACTaGGTGATTAAGATACAGGAT +
Preference number: 5 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTETVWH*VIKIQD
Trigger: ATCCTGTATCTTAATCACCAAGTGCCAAACTGTCTC...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TCTTTTGAAAATGGGTGTGGCCCTTTCCCTTGTCCTACGTCACTGCAGGGAGGAGTAATTTCTGGTCCATaGTACAGGATTCTTAACATG +
Preference number: 5 (lower is better)
Translates to: SFENGCGPFPCPTSLQGGVISGP*YRILNM
Trigger: CATGTTAAGAATCCTGTACAATGGACCAGAAATTAC...TCCTCCCTGCAGTGACGTAGGACAAGGGAAAGGGCCACACCCATTTTCAAAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCCAGGCTTCTTCTTCTTaGGTAATTTCTGGTCCATTG +
Preference number: 5 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSQASSS*VISGPL
Trigger: CAATGGACCAGAAATTACCAAAGAAGAAGAAGCCTG...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGTCTTGGGACTGGTTTTaGTCAATGTGGTGTCAGGTT +
Preference number: 5 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTSWDWF*SMWCQV
Trigger: AACCTGACACCACATTGACAAAAACCAGTCCCAAGA...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTCTCACGTGCGTATTTCCCCAATaGTGGAATGTACATCAGTGC +
Preference number: 5 (lower is better)
Translates to: EQVLKQEDEHIKLPVCLTCVFPQ*WNVHQC
Trigger: GCACTGATGTACATTCCACAATTGGGGAAATACGCA...CGTGAGACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp ATGCTAACGGCTCTATCTCTAGAATTCACAATCTTTCCAGCAGGCCAGGGCACAATACCTTCCTGTTCATaGATAGAAGCCACTACTCCA +
Preference number: 5 (lower is better)
Translates to: MLTALSLEFTIFPAGQGTIPSCS*IEATTP
Trigger: TGGAGTAGTGGCTTCTATCAATGAACAGGAAGGTAT...TGTGCCCTGGCCTGCTGGAAAGATTGTGAATTCTAGAGATAGAGCCGTTAGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACCTCCAAGTAATCTCTTaGGGCTGTCTTCGGTCAGCC +
Preference number: 5 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNLQVIS*GCLRSA
Trigger: GGCTGACCGAAGACAGCCCAAAGAGATTACTTGGAG...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGTAGGAAAAACCTaGGTCTCCCATGCTTTCACC +
Preference number: 5 (lower is better)
Translates to: GILSIMVLDAFPKSYREEMVGKT*VSHAFT
Trigger: GGTGAAAGCATGGGAGACCAAGGTTTTTCCTACCAT...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGCCTGGGGTCTGGGAGTaGATCTGCTCTTTGCTAAGA +
Preference number: 5 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMPGVWE*ICSLLR
Trigger: TCTTAGCAAAGAGCAGATCAACTCCCAGACCCCAGG...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTTGTCAAACTTGGGCTTaGGCACGCCATACTTCCTCA +
Preference number: 5 (lower is better)
Translates to: FPKSYREEMDANGSISRICQTWA*ARHTSS
Trigger: TGAGGAAGTATGGCGTGCCAAAGCCCAAGTTTGACA...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGATTTTGGCTTCACAGTaGGCTTCTTCTCACTTAAGG +
Preference number: 5 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKILASQ*ASSHLR
Trigger: CCTTAAGTGAGAAGAAGCCAACTGTGAAGCCAAAAT...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CAATGTCACTTCTGGGATGTAGGGATGTGGAGGCCAGATAGTAAACAGACCTTCTCTTTTCTGGTGATTTaGGCTTCACAGTTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: QCHFWDVGMWRPDSKQTFSFLVI*ASQLAS
Trigger: AGAAGCCAACTGTGAAGCCAAAATCACCAGAAAAGA...GAAGGTCTGTTTACTATCTGGCCTCCACATCCCTACATCCCAGAAGTGACATTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CAA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGGACGCTACGGATATCTaGCCTGGCTCGGTCAATAAC +
Preference number: 5 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMDATDI*PGSVNN
Trigger: GTTATTGACCGAGCCAGGCAAGATATCCGTAGCGTC...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATACACTCACCTCCAGAGTaGACTTGCATCCAATACAAC +
Preference number: 5 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIHSPPE*TCIQYN
Trigger: GTTGTATTGGATGCAAGTCAACTCTGGAGGTGAGTG...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGCAGATACCTTACAGCTaGTCATCTACTCAAGTGATG +
Preference number: 5 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKQIPYS*SSTQVM
Trigger: CATCACTTGAGTAGATGACAAGCTGTAAGGTATCTG...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS GCA 90 bp GGAACACAAAGTCTAGACAATGGAATAGTCAATGTGTCTGACGCTTaGGAAGTCTTTCTACAGTCTATGGGTGGGAATCTGACTGTAGCT +
Preference number: 5 (lower is better)
Translates to: GTQSLDNGIVNVSDA*EVFLQSMGGNLTVA
Trigger: AGCTACAGTCAGATTCCCACCCATAGACTGTAGAAAGACTTCGCAAGCGTCAGACACATTGACTATTCCATTGTCTAGACTTTGTGTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp ACCTGCTGTAGCATTTCCAACACTTCATCACATCCAGTCAGGATTTaGGTGGCAAGAGCCAAAATACTGACTTTTAGCTCCTTCAATGTC +
Preference number: 5 (lower is better)
Translates to: TCCSISNTSSHPVRI*VARAKILTFSSFNV
Trigger: GACATTGAAGGAGCTAAAAGTCAGTATTTTGGCTCTTGCCACCCAAATCCTGACTGGATGTGATGAAGTGTTGGAAATGCTACAGCAGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000377560.9
CDS CCA 90 bp TGCTTCGTCTTTAATGTCTTCAATGGTGGGAAGATAAAGGTCTCTTaGGATGCCACCATTCTCTTCGTAGAGAAATTCAACCGTCTGTCG +
Preference number: 5 (lower is better)
Translates to: CFVFNVFNGGKIKVS*DATILFVEKFNRLS
Trigger: CGACAGACGGTTGAATTTCTCTACGAAGAGAATGGTGGCATCCCAAGAGACCTTTATCTTCCCACCATTGAAGACATTAAAGACGAAGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS-3UTR CAA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACGGCAAGAAGATTGAGTaGGTGTATGCACATCGCACC +
Preference number: 5 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNGKKIE*VYAHRT
Trigger: GGTGCGATGTGCATACACCAACTCAATCTTCTTGCC...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCCTTGTGATTGGAAGATaGGGGTTGGTGGCAAGAAGA +
Preference number: 5 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSLVIGR*GLVARR
Trigger: TCTTCTTGCCACCAACCCCAATCTTCCAATCACAAG...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp ACCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATTCAATTGGATGCTGCTaGCCCAAGACACTTGTGATT +
Preference number: 5 (lower is better)
Translates to: TSIHTPKPSRQHSLKTSNSIGCC*PKTLVI
Trigger: AATCACAAGTGTCTTGGGCAAGCAGCATCCAATTGA...ATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GAACCACTGTGGGCTTTTCCTCAGAAAAACCAAGACCGGGAGCAAGTTCTAAAGATCTCATTAATGCTTTaGGCAGATTCGCCCTCTTTT +
Preference number: 5 (lower is better)
Translates to: EPLWAFPQKNQDREQVLKISLML*ADSPSF
Trigger: AAAAGAGGGCGAATCTGCCAAAAGCATTAATGAGAT...CTTTAGAACTTGCTCCCGGTCTTGGTTTTTCTGAGGAAAAGCCCACAGTGGTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCTTTGCGGAATCCAGATaGACTTTCTTTACAAGACAC +
Preference number: 5 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSFAESR*TFFTRH
Trigger: GTGTCTTGTAAAGAAAGTCAATCTGGATTCCGCAAA...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGGGGTCAGGATATACTaGCCCTTGTTCTTATTGACA +
Preference number: 5 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDGVRIY*PLFLLT
Trigger: TGTCAATAAGAACAAGGGCAAGTATATCCTGACCCC...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp AAATTGAGCAGAGCACCTCAGTCCACTCTTTTGAAAATGGGTGTGGCCCTTTCCAATGTGGACGAAAGTTaGGAAAAGCAAAATGTTGCC +
Preference number: 5 (lower is better)
Translates to: KLSRAPQSTLLKMGVALSNVDES*EKQNVA
Trigger: GGCAACATTTTGCTTTTCCAAACTTTCGTCCACATT...GGAAAGGGCCACACCCATTTTCAAAAGAGTGGACTGAGGTGCTCTGCTCAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS TCA 90 bp AGTGAGCTTCCAGCAGCATCTATGAGATCTGCACGACTTGTAAACTaGCCATCCGAAATATTATACACCAAGCTGGAGGCTAGGATTTTT +
Preference number: 5 (lower is better)
Translates to: SELPAASMRSARLVN*PSEILYTKLEARIF
Trigger: AAAAATCCTAGCCTCCAGCTTGGTGTATAATATTTCGGATGGTCAGTTTACAAGTCGTGCAGATCTCATAGATGCTGCTGGAAGCTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp GTGGCAAGAAGATTGAGTTGGTGTATGCACATCGCACCAACGTGGTaGAATAATTGGTTTATAACCTCATTCGTGGTTATAGCCTCTTCT +
Preference number: 5 (lower is better)
Translates to: VARRLSWCMHIAPTW*NNWFITSFVVIASS
Trigger: AGAAGAGGCTATAACCACGAATGAGGTTATAAACCAATTATTGCACCACGTTGGTGCGATGTGCATACACCAACTCAATCTTCTTGCCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 90 bp GGTCAAAATACTAGAGATAAACCTAGCACTTGTCACACTTTAGCATaGATCAGTCAAATGGGAAACTTGTTAAGCTGCGCCCCATCCTCA +
Preference number: 5 (lower is better)
Translates to: GQNTRDKPSTCHTLA*ISQMGNLLSCAPSS
Trigger: TGAGGATGGGGCGCAGCTTAACAAGTTTCCCATTTGACTGATGCATGCTAAAGTGTGACAAGTGCTAGGTTTATCTCTAGTATTTTGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311694.7
CDS CCA 90 bp AGATTGAGTTGGTGTATGCACATCGCACCAACGTGGTGCAATAATTaGTTTATAACCTCATTCGTGGTTATAGCCTCTTCTTTGGGCTCA +
Preference number: 5 (lower is better)
Translates to: RLSWCMHIAPTWCNN*FITSFVVIASSLGS
Trigger: TGAGCCCAAAGAAGAGGCTATAACCACGAATGAGGTTATAAACCAATTATTGCACCACGTTGGTGCGATGTGCATACACCAACTCAATCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp TTGGTGGCAAGAAGATTGAGTTGGTGTATGCACATCGCACCAACGTaGTGCAATAATTGGTTTATAACCTCATTCGTGGTTATAGCCTCT +
Preference number: 5 (lower is better)
Translates to: LVARRLSWCMHIAPT*CNNWFITSFVVIAS
Trigger: AGAGGCTATAACCACGAATGAGGTTATAAACCAATTATTGCACCACGTTGGTGCGATGTGCATACACCAACTCAATCTTCTTGCCACCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp ACACTTGTGATTGGAAGATTGGGGTTGGTGGCAAGAAGATTGAGTTaGTGTATGCACATCGCACCAACGTGGTGCAATAATTGGTTTATA +
Preference number: 5 (lower is better)
Translates to: TLVIGRLGLVARRLS*CMHIAPTWCNNWFI
Trigger: TATAAACCAATTATTGCACCACGTTGGTGCGATGTGCATACACCAACTCAATCTTCTTGCCACCAACCCCAATCTTCCAATCACAAGTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS-3UTR CAA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCTATACTTGGTCTAAATaGAGGTCTAGCACGCCCAGA +
Preference number: 5 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSYTWSK*RSSTPR
Trigger: TCTGGGCGTGCTAGACCTCAATTTAGACCAAGTATA...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp GGGATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGGCTAGTATTTGCTGCTaGATCCTCTTTCAGTGTGTT +
Preference number: 5 (lower is better)
Translates to: GILSIMVLDAFPKSYREEASICC*ILFQCV
Trigger: AACACACTGAAAGAGGATCAAGCAGCAAATACTAGC...CTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGATCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TGTGCTGCTCATGAACAAAGTACCACTGGACAAAGACCTATTTGGGGCAAAGATGCTAGTATTTGCTGCTaGATCCTCTTTCAGTGTGTT +
Preference number: 5 (lower is better)
Translates to: CAAHEQSTTGQRPIWGKDASICC*ILFQCV
Trigger: AACACACTGAAAGAGGATCAAGCAGCAAATACTAGC...ATCTTTGCCCCAAATAGGTCTTTGTCCAGTGGTACTTTGTTCATGAGCAGCACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCATCTTGATTGTCTCTTaGAAGCCTCCAAGTGCACAC +
Preference number: 5 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSILIVS*KPPSAH
Trigger: GTGTGCACTTGGAGGCTTCAAAGAGACAATCAAGAT...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACATGGTAGGAAAAACCTaGGTCTCCCATGCTTTCACC +
Preference number: 5 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNMVGKT*VSHAFT
Trigger: GGTGAAAGCATGGGAGACCAAGGTTTTTCCTACCAT...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GACCGGGAGCAAGTTCTAAAGCAGGAAGATGAACACATAAAGCTCCCTGTGTGTAAATTCACGTCCATGTaGACTTTGGATTCGGAAATT +
Preference number: 5 (lower is better)
Translates to: DREQVLKQEDEHIKLPVCKFTSM*TLDSEI
Trigger: AATTTCCGAATCCAAAGTCAACATGGACGTGAATTT...ACACACAGGGAGCTTTATGTGTTCATCTTCCTGCTTTAGAACTTGCTCCCGGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS TCA 90 bp CTCTTCACTAACGTCTTTGTTTTAGCCAGTGGGTGTGAGGGTTTCTaGATAAGAGAATTCACTTCTTGTAGGAACTTCTCCCTCAGTGAT +
Preference number: 5 (lower is better)
Translates to: LFTNVFVLASGCEGF*IREFTSCRNFSLSD
Trigger: ATCACTGAGGGAGAAGTTCCTACAAGAAGTGAATTCTCTTATTCAGAAACCCTCACACCCACTGGCTAAAACAAAGACGTTAGTGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp CTTCTCCATAATGTCACAAATACTGCTAAGATGATGTGCTTCAATTaGATGCTGCTTGCCCAAGACACTTGTGATTGGAAGATTGGGGTT +
Preference number: 5 (lower is better)
Translates to: LLHNVTNTAKMMCFN*MLLAQDTCDWKIGV
Trigger: AACCCCAATCTTCCAATCACAAGTGTCTTGGGCAAGCAGCATCCAATTGAAGCACATCATCTTAGCAGTATTTGTGACATTATGGAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS-3UTR CAA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACAAAGTTTCAATTCCATaGAGACAGTCAGCAGGCTCC +
Preference number: 5 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNKVSIP*RQSAGS
Trigger: GGAGCCTGCTGACTGTCTCAATGGAATTGAAACTTT...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTCACAGAAGATAAAGGTCTCTaGGGATGCCACCATTCTCTT +
Preference number: 5 (lower is better)
Translates to: STLQNLLDSTHSKLPIFTEDKGL*GCHHSL
Trigger: AAGAGAATGGTGGCATCCCAAGAGACCTTTATCTTC...TGTGAATATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACACGTCCATGTTGACTTaGGATTCGGAAATTGGGAAC +
Preference number: 5 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNTSMLT*DSEIGN
Trigger: GTTCCCAATTTCCGAATCCAAAGTCAACATGGACGT...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp CCAGCATCCACACTCCAAAACCTTCTAGACAGCACTCACTCAAAACTTCCAATATTTGCGGAATCCAGATaGACTTTCTTTACAAGACAC +
Preference number: 5 (lower is better)
Translates to: PASTLQNLLDSTHSKLPIFAESR*TFFTRH
Trigger: GTGTCTTGTAAAGAAAGTCAATCTGGATTCCGCAAA...TATTGGAAGTTTTGAGTGAGTGCTGTCTAGAAGGTTTTGGAGTGTGGATGCTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS-3UTR CAA 90 bp GTGTGCACACATGTGTCTGTTTATATGTCAAGAGAAAAGTCTGGAAGGAGAGAGATTTTGGCTTCACAGTaGGCTTCTTCTCACTTAAGG +
Preference number: 5 (lower is better)
Translates to: VCTHVSVYMSREKSGRREILASQ*ASSHLR
Trigger: CCTTAAGTGAGAAGAAGCCAACTGTGAAGCCAAAAT...CTCTCTCCTTCCAGACTTTTCTCTTGACATATAAACAGACACATGTGTGCACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS-3UTR CAA 90 bp ACACAAACTGTCTGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCTCTTTTCTGGTGATTTaGGCTTCACAGTTGGCTTCT +
Preference number: 5 (lower is better)
Translates to: TQTVWELNYPTNRPQTGSSFLVI*ASQLAS
Trigger: AGAAGCCAACTGTGAAGCCAAAATCACCAGAAAAGA...GCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCAGACAGTTTGTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS TCA 90 bp AAGAACTGCCTCAAACAATGGACCTCAAACTTTATTTATAAGCCATaGGGATCAGGGAAAGACACTGCATTGCAACTATTCCTGGCTTTC +
Preference number: 5 (lower is better)
Translates to: KNCLKQWTSNFIYKP*GSGKDTALQLFLAF
Trigger: GAAAGCCAGGAATAGTTGCAATGCAGTGTCTTTCCCTGATCCTCATGGCTTATAAATAAAGTTTGAGGTCCATTGTTTGAGGCAGTTCTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS GCA 90 bp CAAACTTTATTTATAAGCCATGAGGATCAGGGAAAGACACTGCATTaGAACTATTCCTGGCTTTCAAGCACAAAACACCTCGAACCAACT +
Preference number: 5 (lower is better)
Translates to: QTLFISHEDQGKTLH*NYSWLSSTKHLEPT
Trigger: AGTTGGTTCGAGGTGTTTTGTGCTTGAAAGCCAGGAATAGTTGCAATGCAGTGTCTTTCCCTGATCCTCATGGCTTATAAATAAAGTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS CCA 90 bp AAGCAATCCCGACCGTCGAATGATGTCTCGATTCCTTTCAGTTTGTaGGCTGAAGAAAAATTTAAATACCACCTGAAAGACAACGAGAAT +
Preference number: 5 (lower is better)
Translates to: KQSRPSNDVSIPFSL*AEEKFKYHLKDNEN
Trigger: ATTCTCGTTGTCTTTCAGGTGGTATTTAAATTTTTCTTCAGCCCACAAACTGAAAGGAATCGAGACATCATTCGACGGTCGGGATTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 90 bp AAGCAATCCCGACCGTCGAATGATGTCTCGATTCCTTTCAGTTTGTaGGCTGAAGAAAAATTTAAATACCACCTGAACTTTCCCTTTCAT +
Preference number: 5 (lower is better)
Translates to: KQSRPSNDVSIPFSL*AEEKFKYHLNFPFH
Trigger: ATGAAAGGGAAAGTTCAGGTGGTATTTAAATTTTTCTTCAGCCCACAAACTGAAAGGAATCGAGACATCATTCGACGGTCGGGATTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000550724.2
CDS-3UTR CAA 90 bp TTTCCTAAGAGTTACAGGGAGGAGATGGATGCTAACGGCTCTATCTCTAGAATTTTTGTCATAGTCATATaGCGAAGAGCATCTGCTATC +
Preference number: 5 (lower is better)
Translates to: FPKSYREEMDANGSISRIFVIVI*RRASAI
Trigger: GATAGCAGATGCTCTTCGCAATATGACTATGACAAA...AATTCTAGAGATAGAGCCGTTAGCATCCATCTCCTCCCTGTAACTCTTAGGAAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS-3UTR CAA 90 bp TGGGAACTAAACTATCCTACAAATAGACCACAAACAGGCAGCAAAAGAACCAACAGGATATACTTGCCCTaGTTCTTATTGACAGCTGAG +
Preference number: 5 (lower is better)
Translates to: WELNYPTNRPQTGSKRTNRIYLP*FLLTAE
Trigger: CTCAGCTGTCAATAAGAACAAGGGCAAGTATATCCT...GTTGGTTCTTTTGCTGCCTGTTTGTGGTCTATTTGTAGGATAGTTTAGTTCCCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
CDS GCA 90 bp TATTGGAAATTTATTAGAGACTGCAGTGCATCAACCAAGTTCAAGTaGTTAATAACACAAGATACCACCATTTCCTCCATCACGTCTGGC +
Preference number: 5 (lower is better)
Translates to: YWKFIRDCSASTKFK*LITQDTTISSITSG
Trigger: GCCAGACGTGATGGAGGAAATGGTGGTATCTTGTGTTATTAAGCACTTGAACTTGGTTGATGCACTGCAGTCTCTAATAAATTTCCAATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS-3UTR CAA 90 bp ATCCTTTCTATAATGGTCCTTGATGCATTTCCTAAGAGTTACAGGGAGGAGATGTTTGTCATAGTCATATaGCGAAGAGCATCTGCTATC +
Preference number: 5 (lower is better)
Translates to: ILSIMVLDAFPKSYREEMFVIVI*RRASAI
Trigger: GATAGCAGATGCTCTTCGCAATATGACTATGACAAA...CATCTCCTCCCTGTAACTCTTAGGAAATGCATCAAGGACCATTATAGAAAGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000550722.5
CDS TCA 90 bp CAATTGGCATTAGAGCATTTTTGCTTTGTGTCTTCGTCCCTGATTTaGAGAGAAACTCATCTGTATAATCACTTTTTAAGGTACCTGGGA +
Preference number: 5 (lower is better)
Translates to: QLALEHFCFVSSSLI*RETHLYNHFLRYLG
Trigger: TCCCAGGTACCTTAAAAAGTGATTATACAGATGAGTTTCTCTTCAAATCAGGGACGAAGACACAAAGCAAAAATGCTCTAATGCCAATTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000550968.5
CDS TCA 90 bp AAAGTAAAACACTACACAGCAACATACTTTATACTTGGTCTAAATTaGGGTCTAGCACGCCCAGAAATTTCCCTGAGCTTTATCATGATT +
Preference number: 5 (lower is better)
Translates to: KVKHYTATYFILGLN*GLARPEISLSFIMI
Trigger: AATCATGATAAAGCTCAGGGAAATTTCTGGGCGTGCTAGACCTCAATTTAGACCAAGTATAAAGTATGTTGCTGTGTAGTGTTTTACTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000311694.7
CDS GCA 90 bp TACTACTGTGAGACCTTTTCGAACTTTATCAATTGTGAACTTGTTTaGTTCGTCTTTAATGTCTTCAATGGTGGGAAGATAAAGGTCTCT +
Preference number: 5 (lower is better)
Translates to: YYCETFSNFINCELV*FVFNVFNGGKIKVS
Trigger: AGAGACCTTTATCTTCCCACCATTGAAGACATTAAAGACGAAGCAAACAAGTTCACAATTGATAAAGTTCGAAAAGGTCTCACAGTAGTA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 90 bp GCCGCCGCCGCGGCCGCCGACGAGCCCATGGCCCCGGCTGAAGGCTaGGCGCTGAGGAGCAGACGCCCGGCCGGGGGAAACGGAGCAGGA +
Preference number: 6 (lower is better)
Translates to: AAAAAADEPMAPAEG*ALRSRRPAGGNGAG
Trigger: TCCTGCTCCGTTTCCCCCGGCCGGGCGTCTGCTCCTCAGCGCCAAGCCTTCAGCCGGGGCCATGGGCTCGTCGGCGGCCGCGGCGGCGGC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000682272.1
CDS CAA 72 bp GCGGCCGCCGACGAGCCCATGGCCCCGGCTGAAGGCTaGGCGCTGAGGAGCAGACGCCCGGCCGGGGGAAAC +
Preference number: 6 (lower is better)
Translates to: AAADEPMAPAEG*ALRSRRPAGGN
Trigger: GTTTCCCCCGGCCGGGCGTCTGCTCCTCAGCGCCAAGCCTTCAGCCGGGGCCATGGGCTCGTCGGCGGCCGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000682272.1
CDS GCA 72 bp CGCCCGCCAGCGGCGCCCCACTTGCTGCCTCGCCCGTaGAACTCCGCCCTAGGCGGTCCGAGTCGCCATACC +
Preference number: 6 (lower is better)
Translates to: RPPAAPHLLPRP*NSALGGPSRHT
Trigger: GGTATGGCGACTCGGACCGCCTAGGGCGGAGTTGCACGGGCGAGGCAGCAAGTGGGGCGCCGCTGGCGGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000682272.1
CDS TCA 72 bp CCGACGAGCCCATGGCCCCGGCTGAAGGCTTGGCGCTaGGGAGCAGACGCCCGGCCGGGGGAAACGGAGCAG +
Preference number: 6 (lower is better)
Translates to: PTSPWPRLKAWR*GADARPGETEQ
Trigger: CTGCTCCGTTTCCCCCGGCCGGGCGTCTGCTCCTCAGCGCCAAGCCTTCAGCCGGGGCCATGGGCTCGTCGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000682272.1
CDS CCA 72 bp CGGTGGGGCCCACCAGGGCCTGGCAGGCATCGGCGATaGCGTCACTCGTCACGCCCAGCCCCTGTGGGTCCT +
Preference number: 6 (lower is better)
Translates to: RWGPPGPGRHRR*RHSSRPAPVGP
Trigger: AGGACCCACAGGGGCTGGGCGTGACGAGTGACGCCATCGCCGATGCCTGCCAGGCCCTGGTGGGCCCCACCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp AGCAAGCGGCTGTGGGCGGTGGGGCCCACCAGGGCCTaGCAGGCATCGGCGATGGCGTCACTCGTCACGCCC +
Preference number: 6 (lower is better)
Translates to: SKRLWAVGPTRA*QASAMASLVTP
Trigger: GGGCGTGACGAGTGACGCCATCGCCGATGCCTGCCAGGCCCTGGTGGGCCCCACCGCCCACAGCCGCTTGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 72 bp CGCCGTGGGCGTTGCAGGCCTTGCGGATGGCGCCTCTaGCTACGCCCTCGTCCAGGTGGGTGGGGATCCCGG +
Preference number: 6 (lower is better)
Translates to: RRGRCRPCGWRL*LRPRPGGWGSR
Trigger: CCGGGATCCCCACCCACCTGGACGAGGGCGTAGTCAGAGGCGCCATCCGCAAGGCCTGCAACGCCCACGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp TGCAGGAAGATGGTCTCTTCCTTCACCGAGAGCCACTaGGCCGAGTCAGCGGCCGCCGCCGCCGCCGCCGCC +
Preference number: 6 (lower is better)
Translates to: CRKMVSSFTESH*AESAAAAAAAA
Trigger: GGCGGCGGCGGCGGCGGCGGCCGCTGACTCGGCGCAGTGGCTCTCGGTGAAGGAAGAGACCATCTTCCTGCA
72% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377560.9
ENST00000682272.1
CDS GCA 72 bp CTGGGCCTAGCAGGCCTGTGCCTGTCCCTGGACCCCTaGTCCCTCGCTCGGCCCCCTGTGCCTTCTCTGCCC +
Preference number: 6 (lower is better)
Translates to: LGLAGLCLSLDP*SLARPPVPSLP
Trigger: GGGCAGAGAAGGCACAGGGGGCCGAGCGAGGGAGCAGGGGTCCAGGGACAGGCACAGGCCTGCTAGGCCCAG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547085.1
CDS TCA 72 bp GCCGGGCCTCAGGCACGACGTCCACTCTCGTGGCCTTaGGGGGCGCTGGGTGGGACGTTGCCCTCCACACTC +
Preference number: 6 (lower is better)
Translates to: AGPQARRPLSWP*GALGGTLPSTL
Trigger: GAGTGTGGAGGGCAACGTCCCACCCAGCGCCCCTCAAGGCCACGAGAGTGGACGTCGTGCCTGAGGCCCGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS TCA 72 bp GGCGAAGCGCAGGCGCAGGCTCTCGATGGGCACGTCTaGGGGCGCAGGAGCAGTCAGGCTGAGATCTCGGCC +
Preference number: 6 (lower is better)
Translates to: GEAQAQALDGHV*GRRSSQAEISA
Trigger: GGCCGAGATCTCAGCCTGACTGCTCCTGCGCCCTCAGACGTGCCCATCGAGAGCCTGCGCCTGCGCTTCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000548588.2
ENST00000651701.1
CDS CAA 72 bp TGCCGGGCCTCAGGCACGACGTCCACTCTCGTGGCCTaGAGGGGCGCTGGGTGGGACGTTGCCCTCCACACT +
Preference number: 6 (lower is better)
Translates to: CRASGTTSTLVA*RGAGWDVALHT
Trigger: AGTGTGGAGGGCAACGTCCCACCCAGCGCCCCTCAAGGCCACGAGAGTGGACGTCGTGCCTGAGGCCCGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS CAA 90 bp AGCAGCTTCTGCCGGGCCTCAGGCACGACGTCCACTCTCGTGGCCTaGAGGGGCGCTGGGTGGGACGTTGCCCTCCACACTCAGCCAGGA +
Preference number: 6 (lower is better)
Translates to: SSFCRASGTTSTLVA*RGAGWDVALHTQPG
Trigger: TCCTGGCTGAGTGTGGAGGGCAACGTCCCACCCAGCGCCCCTCAAGGCCACGAGAGTGGACGTCGTGCCTGAGGCCCGGCAGAAGCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS TCA 72 bp CCCCGAGGATCTCGCTGGGCAGCTCGGCCAGGTCGGTaGCCCGGATCAGCCCGTCGTGCAGGAAGATGGTCT +
Preference number: 6 (lower is better)
Translates to: PRGSRWAARPGR*PGSARRAGRWS
Trigger: AGACCATCTTCCTGCACGACGGGCTGATCCGGGTCACCGACCTGGCCGAGCTGCCCAGCGAGATCCTCGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550724.2
ENST00000682272.1
CDS GCA 72 bp CTGGGTGGGCCCCCGGGAGCCAAGCTCCTTCTGCTATaGCCCTTCCCTGAGCTCCTGAGGGGACCTTCCAGC +
Preference number: 6 (lower is better)
Translates to: LGGPPGAKLLLL*PFPELLRGPSS
Trigger: GCTGGAAGGTCCCCTCAGGAGCTCAGGGAAGGGGCATAGCAGAAGGAGCTTGGCTCCCGGGGGCCCACCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547085.1
CDS CCA 72 bp AGCACGGTGGGGTCCGAGTCCACGGTGCGGGAAGACTaGCGCTTGCCCGACGAGGAGGCCTTTTCCCGCTTC +
Preference number: 6 (lower is better)
Translates to: STVGSESTVRED*RLPDEEAFSRF
Trigger: GAAGCGGGAAAAGGCCTCCTCGTCGGGCAAGCGCCAGTCTTCCCGCACCGTGGACTCGGACCCCACCGTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp GCAGCATCCGCGGGGTCCAGGTACACCTCATGGGGATaGAGCCGTGCGGGTGTGATGGCGAGGTGGCGGCAT +
Preference number: 6 (lower is better)
Translates to: AASAGSRYTSWG*SRAGVMARWRH
Trigger: ATGCCGCCACCTCGCCATCACACCCGCACGGCTCCATCCCCATGAGGTGTACCTGGACCCCGCGGATGCTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548588.2
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp GGGTCAGCAGCATCCGCGGGGTCCAGGTACACCTCATaGGGATGGAGCCGTGCGGGTGTGATGGCGAGGTGG +
Preference number: 6 (lower is better)
Translates to: GSAASAGSRYTS*GWSRAGVMARW
Trigger: CCACCTCGCCATCACACCCGCACGGCTCCATCCCCATGAGGTGTACCTGGACCCCGCGGATGCTGCTGACCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548588.2
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 90 bp CTCGAGGCCGGCAGGCAGCGGATCCACAGAGAGGTCGCTGACGGTTaGGGAGATGCCCTGCGAGCTGCAGATGGAGGCCTGGCTGGTGGA +
Preference number: 6 (lower is better)
Translates to: LEAGRQRIHREVADG*GDALRAADGGLAGG
Trigger: TCCACCAGCCAGGCCTCCATCTGCAGCTCGCAGGGCATCTCCCAAACCGTCAGCGACCTCTCTGTGGATCCGCTGCCTGCCGGCCTCGAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 72 bp ACCACAGCATGTCCTCGGGCTTGCTGCCTCCGATGCTaGGCACGGTGGGGTCCGAGTCCACGGTGCGGGAAG +
Preference number: 6 (lower is better)
Translates to: TTACPRACCLRC*ARWGPSPRCGK
Trigger: CTTCCCGCACCGTGGACTCGGACCCCACCGTGCTCAGCATCGGAGGCAGCAAGCCCGAGGACATGCTGTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 72 bp CGAGGCCGGCAGGCAGCGGATCCACAGAGAGGTCGCTaGCGGTTTGGGAGATGCCCTGCGAGCTGCAGATGG +
Preference number: 6 (lower is better)
Translates to: RGRQAADPQRGR*RFGRCPASCRW
Trigger: CCATCTGCAGCTCGCAGGGCATCTCCCAAACCGTCAGCGACCTCTCTGTGGATCCGCTGCCTGCCGGCCTCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 72 bp GAGCCGCCTCTGCTTCAAGGAGAAGCAGGAGCGTCCTaGCTGCTGACGCCTGGAAGGCCAGGGGCCTGGACC +
Preference number: 6 (lower is better)
Translates to: EPPLLQGEAGAS*LLTPGRPGAWT
Trigger: GGTCCAGGCCCCTGGCCTTCCAGGCGTCAGCAGTCAGGACGCTCCTGCTTCTCCTTGAAGCAGAGGCGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS CCA 72 bp TTGCGGATGGCGCCTCTGACTACGCCCTCGTCCAGGTaGGTGGGGATCCCGGAGATCACCAGCAAGCGGCTG +
Preference number: 6 (lower is better)
Translates to: LRMAPLTTPSSR*VGIPEITSKRL
Trigger: CAGCCGCTTGCTGGTGATCTCCGGGATCCCCACCCACCTGGACGAGGGCGTAGTCAGAGGCGCCATCCGCAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp AGGGAAATGTCCAGGCTTTCCTGGCTGGACACCGCGTaGGGCTCCAACAGGCCCGGAGGGATGGGCAGCTCG +
Preference number: 6 (lower is better)
Translates to: REMSRLSWLDTA*GSNRPGGMGSS
Trigger: CGAGCTGCCCATCCCTCCGGGCCTGTTGGAGCCCCACGCGGTGTCCAGCCAGGAAAGCCTGGACATTTCCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp CTGCCGGTGCTGCACAGGGAAATGTCCAGGCTTTCCTaGCTGGACACCGCGTGGGGCTCCAACAGGCCCGGA +
Preference number: 6 (lower is better)
Translates to: LPVLHREMSRLS*LDTAWGSNRPG
Trigger: TCCGGGCCTGTTGGAGCCCCACGCGGTGTCCAGCCAGGAAAGCCTGGACATTTCCCTGTGCAGCACCGGCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp ACGACGTCCACTCTCGTGGCCTTGAGGGGCGCTGGGTaGGACGTTGCCCTCCACACTCAGCCAGGATGGCTC +
Preference number: 6 (lower is better)
Translates to: TTSTLVALRGAG*DVALHTQPGWL
Trigger: GAGCCATCCTGGCTGAGTGTGGAGGGCAACGTCCCACCCAGCGCCCCTCAAGGCCACGAGAGTGGACGTCGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS CCA 72 bp AGGCACGACGTCCACTCTCGTGGCCTTGAGGGGCGCTaGGTGGGACGTTGCCCTCCACACTCAGCCAGGATG +
Preference number: 6 (lower is better)
Translates to: RHDVHSRGLEGR*VGRCPPHSARM
Trigger: CATCCTGGCTGAGTGTGGAGGGCAACGTCCCACCCAGCGCCCCTCAAGGCCACGAGAGTGGACGTCGTGCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS CAA 72 bp GTGAGTGCGCGGTGGAACCACAGCATGTCCTCGGGCTaGCTGCCTCCGATGCTGAGCACGGTGGGGTCCGAG +
Preference number: 6 (lower is better)
Translates to: VSARWNHSMSSG*LPPMLSTVGSE
Trigger: CTCGGACCCCACCGTGCTCAGCATCGGAGGCAGCAAGCCCGAGGACATGCTGTGGTTCCACCGCGCACTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp TCGTCTTTGAAGACCCCGCCGTGGGCGTTGCAGGCCTaGCGGATGGCGCCTCTGACTACGCCCTCGTCCAGG +
Preference number: 6 (lower is better)
Translates to: SSLKTPPWALQA*RMAPLTTPSSR
Trigger: CCTGGACGAGGGCGTAGTCAGAGGCGCCATCCGCAAGGCCTGCAACGCCCACGGCGGGGTCTTCAAAGACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 90 bp ATGAGCAGGGTGAGTGCGCGGTGGAACCACAGCATGTCCTCGGGCTaGCTGCCTCCGATGCTGAGCACGGTGGGGTCCGAGTCCACGGTG +
Preference number: 6 (lower is better)
Translates to: MSRVSARWNHSMSSG*LPPMLSTVGSESTV
Trigger: CACCGTGGACTCGGACCCCACCGTGCTCAGCATCGGAGGCAGCAAGCCCGAGGACATGCTGTGGTTCCACCGCGCACTCACCCTGCTCAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 72 bp TGGCTCGGGATCTTATCTCCACGACTGCGAAGCCTTTaGTGGGGCGGGCGGCGAGGGGCTGGTTGTCCAGGG +
Preference number: 6 (lower is better)
Translates to: WLGILSPRLRSL*WGGRRGAGCPG
Trigger: CCCTGGACAACCAGCCCCTCGCCGCCCGCCCCATCAAAGGCTTCGCAGTCGTGGAGATAAGATCCCGAGCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 72 bp CCACCAGGGGCAGGAAGAAGGTCTCCAGTGTGGTGTTaGGGGACTGCAGCAAGGCGAAGCGCAGGCGCAGGC +
Preference number: 6 (lower is better)
Translates to: PPGAGRRSPVWC*GTAARRSAGAG
Trigger: GCCTGCGCCTGCGCTTCGCCTTGCTGCAGTCCCTCAACACCACACTGGAGACCTTCTTCCTGCCCCTGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548588.2
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp CACTCTCGTGGCCTTGAGGGGCGCTGGGTGGGACGTTaGCCTCCACACTCAGCCAGGATGGCTCTCTCAGCT +
Preference number: 6 (lower is better)
Translates to: HSRGLEGRWVGR*PPHSARMALSA
Trigger: AGCTGAGAGAGCCATCCTGGCTGAGTGTGGAGGGCAACGTCCCACCCAGCGCCCCTCAAGGCCACGAGAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS CCA 72 bp AGGTGGCGGAGGATGATGAGCAGGGTGAGTGCGCGGTaGAACCACAGCATGTCCTCGGGCTTGCTGCCTCCG +
Preference number: 6 (lower is better)
Translates to: RWRRMMSRVSAR*NHSMSSGLLPP
Trigger: CGGAGGCAGCAAGCCCGAGGACATGCTGTGGTTCCACCGCGCACTCACCCTGCTCATCATCCTCCGCCACCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp GCAGGCAGCGGATCCACAGAGAGGTCGCTGACGGTTTaGGAGATGCCCTGCGAGCTGCAGATGGAGGCCTGG +
Preference number: 6 (lower is better)
Translates to: AGSGSTERSLTV*EMPCELQMEAW
Trigger: CCAGGCCTCCATCTGCAGCTCGCAGGGCATCTCCCAAACCGTCAGCGACCTCTCTGTGGATCCGCTGCCTGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp GGGCTGCCCAAGGACGCTGCCCGTGGATTCTGGCCCTaGTGTCTTGCAGGTCACCTCTCTCTTCCTGCAGGG +
Preference number: 6 (lower is better)
Translates to: GLPKDAARGFWP*CLAGHLSLPAG
Trigger: CCCTGCAGGAAGAGAGAGGTGACCTGCAAGACACCAGGGCCAGAATCCACGGGCAGCGTCCTTGGGCAGCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS CCA 72 bp CATCTTCCTGGCGGGGCTGCCCAAGGACGCTGCCCGTaGATTCTGGCCCTGGTGTCTTGCAGGTCACCTCTC +
Preference number: 6 (lower is better)
Translates to: HLPGGAAQGRCP*ILALVSCRSPL
Trigger: GAGAGGTGACCTGCAAGACACCAGGGCCAGAATCCACGGGCAGCGTCCTTGGGCAGCCCCGCCAGGAAGATG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS CCA 72 bp TCAAGGAGAAGCAGGAGCGTCCTGACTGCTGACGCCTaGAAGGCCAGGGGCCTGGACCCTGGAACCCCAGCT +
Preference number: 6 (lower is better)
Translates to: SRRSRSVLTADA*KARGLDPGTPA
Trigger: AGCTGGGGTTCCAGGGTCCAGGCCCCTGGCCTTCCAGGCGTCAGCAGTCAGGACGCTCCTGCTTCTCCTTGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS CAA 72 bp TCCTCGCCCTGGTGCAGGGTCCGGGTGATGGCCACGTaGAGCCACTCTCTCACTGTCTGGGAGTTGCCCTGG +
Preference number: 6 (lower is better)
Translates to: SSPWCRVRVMAT*SHSLTVWELPW
Trigger: CCAGGGCAACTCCCAGACAGTGAGAGAGTGGCTCAACGTGGCCATCACCCGGACCCTGCACCAGGGCGAGGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp GTGGGGTCCGAGTCCACGGTGCGGGAAGACTGGCGCTaGCCCGACGAGGAGGCCTTTTCCCGCTTCATCTTG +
Preference number: 6 (lower is better)
Translates to: VGSESTVREDWR*PDEEAFSRFIL
Trigger: CAAGATGAAGCGGGAAAAGGCCTCCTCGTCGGGCAAGCGCCAGTCTTCCCGCACCGTGGACTCGGACCCCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp GGCAGGCAGCGGATCCACAGAGAGGTCGCTGACGGTTaGGGAGATGCCCTGCGAGCTGCAGATGGAGGCCTG +
Preference number: 6 (lower is better)
Translates to: GRQRIHREVADG*GDALRAADGGL
Trigger: CAGGCCTCCATCTGCAGCTCGCAGGGCATCTCCCAAACCGTCAGCGACCTCTCTGTGGATCCGCTGCCTGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp GCCTTGTCCTTGGCGGGCGGCTTGGTGATAGGCCGCTaGGTGCTCACCACCTTCACGGGGTGCTGCTCCTTC +
Preference number: 6 (lower is better)
Translates to: ALSLAGGLVIGR*VLTTFTGCCSF
Trigger: GAAGGAGCAGCACCCCGTGAAGGTGGTGAGCACCAAGCGGCCTATCACCAAGCCGCCCGCCAAGGACAAGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp CCAAGGACGCTGCCCGTGGATTCTGGCCCTGGTGTCTaGCAGGTCACCTCTCTCTTCCTGCAGGGCCAGGGC +
Preference number: 6 (lower is better)
Translates to: PRTLPVDSGPGV*QVTSLFLQGQG
Trigger: GCCCTGGCCCTGCAGGAAGAGAGAGGTGACCTGCAAGACACCAGGGCCAGAATCCACGGGCAGCGTCCTTGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS CAA 90 bp TTGAGCACAGCCTTGTCCTTGGCGGGCGGCTTGGTGATAGGCCGCTaGGTGCTCACCACCTTCACGGGGTGCTGCTCCTTCCCGGCCTTG +
Preference number: 6 (lower is better)
Translates to: LSTALSLAGGLVIGR*VLTTFTGCCSFPAL
Trigger: CAAGGCCGGGAAGGAGCAGCACCCCGTGAAGGTGGTGAGCACCAAGCGGCCTATCACCAAGCCGCCCGCCAAGGACAAGGCTGTGCTCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 90 bp GTCCTGCTGACGCTGTTGAGCACAGCCTTGTCCTTGGCGGGCGGCTaGGTGATAGGCCGCTTGGTGCTCACCACCTTCACGGGGTGCTGC +
Preference number: 6 (lower is better)
Translates to: VLLTLLSTALSLAGG*VIGRLVLTTFTGCC
Trigger: GCAGCACCCCGTGAAGGTGGTGAGCACCAAGCGGCCTATCACCAAGCCGCCCGCCAAGGACAAGGCTGTGCTCAACAGCGTCAGCAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 72 bp GCGGTGGCCACGGCAGCAATCCGGCATGGTGGCCCATaGGTGCCTGGGTCTGATGCAATACTGGTGCCAGCA +
Preference number: 6 (lower is better)
Translates to: AVATAAIRHGGP*VPGSDAILVPA
Trigger: TGCTGGCACCAGTATTGCATCAGACCCAGGCACTCATGGGCCACCATGCCGGATTGCTGCCGTGGCCACCGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 72 bp CTGGGGACGCGTCCCGCGGGTAACAGGCGGCCTCGATaGGGTTCAGCTGGCCATTTCGCTTCACTTTGTGGC +
Preference number: 6 (lower is better)
Translates to: LGTRPAGNRRPR*GSAGHFASLCG
Trigger: GCCACAAAGTGAAGCGAAATGGCCAGCTGAACCTCATCGAGGCCGCCTGTTACCCGCGGGACGCGTCCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 72 bp CTCTGCTTCAAGGAGAAGCAGGAGCGTCCTGACTGCTaGCGCCTGGAAGGCCAGGGGCCTGGACCCTGGAAC +
Preference number: 6 (lower is better)
Translates to: LCFKEKQERPDC*RLEGQGPGPWN
Trigger: GTTCCAGGGTCCAGGCCCCTGGCCTTCCAGGCGTCAGCAGTCAGGACGCTCCTGCTTCTCCTTGAAGCAGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS GCA 72 bp AGCTCGGCCAGGTCGGTGACCCGGATCAGCCCGTCGTaGAGGAAGATGGTCTCTTCCTTCACCGAGAGCCAC +
Preference number: 6 (lower is better)
Translates to: SSARSVTRISPS*RKMVSSFTESH
Trigger: GTGGCTCTCGGTGAAGGAAGAGACCATCTTCCTGCACGACGGGCTGATCCGGGTCACCGACCTGGCCGAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550724.2
ENST00000682272.1
CDS GCA 72 bp CCGACTCGTACGGCAGCTGTCAGCAATTCCCGCATGTaGACCAGTGCCTGCTTGCGAGTGTTTCCCCGCCGC +
Preference number: 6 (lower is better)
Translates to: PTRTAAVSNSRM*TSACLRVFPRR
Trigger: GCGGCGGGGAAACACTCGCAAGCAGGCACTGGTGCACATGCGGGAATTGCTGACAGCTGCCGTACGAGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp GCAGGGGTCCCAGAGATGCTTCTCGTGAGGCCCGACTaGGCTGCGATGGTGACATGCAGCAACAGCTCGGCT +
Preference number: 6 (lower is better)
Translates to: AGVPEMLLVRPD*AAMVTCSNSSA
Trigger: AGCCGAGCTGTTGCTGCATGTCACCATCGCAGCCCAGTCGGGCCTCACGAGAAGCATCTCTGGGACCCCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp CTGCCCGCAGTATGTGAAGTACACCCGGCCCTTGGCTaGCTGTCCCGGAGGAGGTGGAGTCCCCTCAGTTCT +
Preference number: 6 (lower is better)
Translates to: LPAVCEVHPALG*LSRRRWSPLSS
Trigger: AGAACTGAGGGGACTCCACCTCCTCCGGGACAGCCAGCCAAGGGCCGGGTGTACTTCACATACTGCGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp ACTGCGAAGCCTTTGATGGGGCGGGCGGCGAGGGGCTaGTTGTCCAGGGAAGTGACTGTGTACATGGAGCCC +
Preference number: 6 (lower is better)
Translates to: TAKPLMGRAARG*LSREVTVYMEP
Trigger: GGGCTCCATGTACACAGTCACTTCCCTGGACAACCAGCCCCTCGCCGCCCGCCCCATCAAAGGCTTCGCAGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp CCTCCTTCAGCAGGGCGGCGATGCTGTGGGTATACATaGGTGTCTGGCGCAGCTCCACCAGGGGCAGGAAGA +
Preference number: 6 (lower is better)
Translates to: PPSAGRRCCGYT*VSGAAPPGAGR
Trigger: TCTTCCTGCCCCTGGTGGAGCTGCGCCAGACACCCATGTATACCCACAGCATCGCCGCCCTGCTGAAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548588.2
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp AGCCCTTTGGCCTCCTTCAGCAGGGCGGCGATGCTGTaGGTATACATGGGTGTCTGGCGCAGCTCCACCAGG +
Preference number: 6 (lower is better)
Translates to: SPLASFSRAAML*VYMGVWRSSTR
Trigger: CCTGGTGGAGCTGCGCCAGACACCCATGTATACCCACAGCATCGCCGCCCTGCTGAAGGAGGCCAAAGGGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp GGCCCAATGCTGACGATGAGGCCTGACTGTGCCCACTaGGTGGCTTTCCGCAGGGCGGCTGCAGCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: GPMLTMRPDCAH*VAFRRAAAASS
Trigger: AGAAGAGGCTGCAGCCGCCCTGCGGAAAGCCACCAAGTGGGCACAGTCAGGCCTCATCGTCAGCATTGGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp TTGGCTCGGGATCTTATCTCCACGACTGCGAAGCCTTaGATGGGGCGGGCGGCGAGGGGCTGGTTGTCCAGG +
Preference number: 6 (lower is better)
Translates to: LARDLISTTAKP*MGRAARGWLSR
Trigger: CCTGGACAACCAGCCCCTCGCCGCCCGCCCCATCAAAGGCTTCGCAGTCGTGGAGATAAGATCCCGAGCCAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp GCAGTCCTGCTGACGCTGTTGAGCACAGCCTTGTCCTaGGCGGGCGGCTTGGTGATAGGCCGCTTGGTGCTC +
Preference number: 6 (lower is better)
Translates to: AVLLTLLSTALS*AGGLVIGRLVL
Trigger: GAGCACCAAGCGGCCTATCACCAAGCCGCCCGCCAAGGACAAGGCTGTGCTCAACAGCGTCAGCAGGACTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 72 bp GCTGTAAAGACTGCGCCAGGAGGATCGAGCTGGAGCTaGTGGTGCCGTCTGGGAGAGGAGGTGCGAGGAGCT +
Preference number: 6 (lower is better)
Translates to: AVKTAPGGSSWS*WCRLGEEVRGA
Trigger: AGCTCCTCGCACCTCCTCTCCCAGACGGCACCATCAGCTCCAGCTCGATCCTCCTGGCGCAGTCTTTACAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp GGTCCCAGAGATGCTTCTCGTGAGGCCCGACTGGGCTaGGATGGTGACATGCAGCAACAGCTCGGCTCGGTT +
Preference number: 6 (lower is better)
Translates to: GPRDASREARLG*DGDMQQQLGSV
Trigger: AACCGAGCCGAGCTGTTGCTGCATGTCACCATCGCAGCCCAGTCGGGCCTCACGAGAAGCATCTCTGGGACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp GTGGGCTTGTCCCTGCTGTCCTCAATGGCCAGCGACTaGAGGAGTGTAAAGGAGCTGCTGCGGTGGCTGGTC +
Preference number: 6 (lower is better)
Translates to: VGLSLLSSMASD*RSVKELLRWLV
Trigger: GACCAGCCACCGCAGCAGCTCCTTTACACTCCTGCAGTCGCTGGCCATTGAGGACAGCAGGGACAAGCCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp TCTCTTCTGCTAGGTCAGTGCACAGGTCAGCAGCATTaGGGTGGGCCTGCCCTTCCGCGTAGGCAAACGGCC +
Preference number: 6 (lower is better)
Translates to: SLLLGQCTGQQH*GGPALPRRQTA
Trigger: GGCCGTTTGCCTACGCGGAAGGGCAGGCCCACCGCAATGCTGCTGACCTGTGCACTGACCTAGCAGAAGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp GGGCACTGGGCAACAGCACCATGCTGTCAACATCTGTaGGTGGCGTACGCATGCCCTGGACAGGCAGGAAGG +
Preference number: 6 (lower is better)
Translates to: GHWATAPCCQHL*VAYACPGQAGR
Trigger: CCTTCCTGCCTGTCCAGGGCATGCGTACGCCACGCACAGATGTTGACAGCATGGTGCTGTTGCCCAGTGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS GCA 72 bp TGGCCAGGCAGTGCCTCAGTCGGCCATGGAGTATTCTaGCGGCATAGGCAGAAGCCGCTGGCACCTCCTTCA +
Preference number: 6 (lower is better)
Translates to: WPGSASVGHGVF*RHRQKPLAPPS
Trigger: TGAAGGAGGTGCCAGCGGCTTCTGCCTATGCCGGCAGAATACTCCATGGCCGACTGAGGCACTGCCTGGCCA
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS GCA 72 bp GGCACTGACCTTTGGCCTCCTTCAGCAGGGCGGCGATaGTGTGGGTATACATGGGTGTCTGGCGCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: GTDLWPPSAGRR*CGYTWVSGAAP
Trigger: TGGAGCTGCGCCAGACACCCATGTATACCCACAGCATCGCCGCCCTGCTGAAGGAGGCCAAAGGTCAGTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548588.2
CDS CCA 72 bp GCCTGGTTGCCACAGCACTCTGTGGCTCGGGCAAGATaGTTAGTGAGAAGGCTGGACACCTGCCGGGCCAGA +
Preference number: 6 (lower is better)
Translates to: AWLPQHSVARAR*LVRRLDTCRAR
Trigger: TCTGGCCCGGCAGGTGTCCAGCCTTCTCACTAACCATCTTGCCCGAGCCACAGAGTGCTGTGGCAACCAGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp TTTGGGCTGTCTTCGGTCAGCCTGCAAAGGAGGTGGTaGGGGCCGAGCACAGTCCCGGTAGAGCATCCTCAG +
Preference number: 6 (lower is better)
Translates to: FGLSSVSLQRRW*GPSTVPVEHPQ
Trigger: CTGAGGATGCTCTACCGGGACTGTGCTCGGCCCCCACCACCTCCTTTGCAGGCTGACCGAAGACAGCCCAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000552437.1
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp CTCTTTGGGCTGTCTTCGGTCAGCCTGCAAAGGAGGTaGTGGGGGCCGAGCACAGTCCCGGTAGAGCATCCT +
Preference number: 6 (lower is better)
Translates to: LFGLSSVSLQRR*WGPSTVPVEHP
Trigger: AGGATGCTCTACCGGGACTGTGCTCGGCCCCCACCACCTCCTTTGCAGGCTGACCGAAGACAGCCCAAAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000552437.1
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp GCCATGGAGTATTCTGCCGGCATAGGCAGAAGCCGCTaGCACCTCCTTCACCTGAGGCCCAGGAGAGAGCAG +
Preference number: 6 (lower is better)
Translates to: AMEYSAGIGRSR*HLLHLRPRREQ
Trigger: CTGCTCTCTCCTGGGCCTCAGGTGAAGGAGGTGCCAGCGGCTTCTGCCTATGCCGGCAGAATACTCCATGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS CCA 72 bp GGGCGCAGGAGCAGTCAGGCTGAGATCTCGGCCAGGTaGCTGAGATGCCTGACTCACAGGCAACACAGGCAA +
Preference number: 6 (lower is better)
Translates to: GRRSSQAEISAR*LRCLTHRQHRQ
Trigger: TTGCCTGTGTTGCCTGTGAGTCAGGCATCTCAGCCACCTGGCCGAGATCTCAGCCTGACTGCTCCTGCGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548588.2
ENST00000651701.1
CDS CAA 72 bp ACGCTGTTGAGCACAGCCTTGTCCTTGGCGGGCGGCTaGGTGATAGGCCGCTTGGTGCTCACCACCTTCACG +
Preference number: 6 (lower is better)
Translates to: TLLSTALSLAGG*VIGRLVLTTFT
Trigger: CGTGAAGGTGGTGAGCACCAAGCGGCCTATCACCAAGCCGCCCGCCAAGGACAAGGCTGTGCTCAACAGCGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp CTGGTGCCATGGACCTCCTCGCCAGTGAAGCGGATGTaGAAGGCATATGTGGGGTCACCGCCACTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: LVPWTSSPVKRM*KAYVGSPPLAS
Trigger: GCTGGCCAGTGGCGGTGACCCCACATATGCCTTCAACATCCGCTTCACTGGCGAGGAGGTCCATGGCACCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547085.1
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp GTGGTGCCATGGACCTCCTCGCCAGTGAAGCGGATGTaGAAGGCATATGTGGGGTCACCGCCACTGGCCAGC +
Preference number: 6 (lower is better)
Translates to: VVPWTSSPVKRM*KAYVGSPPLAS
Trigger: GCTGGCCAGTGGCGGTGACCCCACATATGCCTTCAACATCCGCTTCACTGGCGAGGAGGTCCATGGCACCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS CAA 90 bp AAGGGGGAAGACCAGCAGGAGCCCCATCCTCGATGTGAAGGGCGCTaGCTCAGGTTGCTGCAACAAGCCCTGGCGTTTGAGCAGGGCCAA +
Preference number: 6 (lower is better)
Translates to: KGEDQQEPHPRCEGR*LRLLQQALAFEQGQ
Trigger: TTGGCCCTGCTCAAACGCCAGGGCTTGTTGCAGCAACCTGAGCAAGCGCCCTTCACATCGAGGATGGGGCTCCTGCTGGTCTTCCCCCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp CGTACGGCAGCTGTCAGCAATTCCCGCATGTGCACCAGTGCCTGCTaGCGAGTGTTTCCCCGCCGCCACCTTGTCTGTGCAGCCAAAAGG +
Preference number: 6 (lower is better)
Translates to: RTAAVSNSRMCTSAC*RVFPRRHLVCAAKR
Trigger: CCTTTTGGCTGCACAGACAAGGTGGCGGCGGGGAAACACTCGCAAGCAGGCACTGGTGCACATGCGGGAATTGCTGACAGCTGCCGTACG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp GCCTCTGTGGAGCCACCTTCCTCTTTTTCCCACTCAACACAGCGGTaGGCAAGCACCTGGAAGGCAGCCCAGGCCATGGTGGCCACCTTC +
Preference number: 6 (lower is better)
Translates to: ASVEPPSSFSHSTQR*ASTWKAAQAMVATF
Trigger: GAAGGTGGCCACCATGGCCTGGGCTGCCTTCCAGGTGCTTGCCAACCGCTGTGTTGAGTGGGAAAAAGAGGAAGGTGGCTCCACAGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp AAAGAGCCGCTGGTGCCATGGACCTCCTCGCCAGTGAAGCGGATGTaGAAGGCATATGTGGGGTCACCGCCACTGGCCAGCTTGACGCAG +
Preference number: 6 (lower is better)
Translates to: KEPLVPWTSSPVKRM*KAYVGSPPLASLTQ
Trigger: CTGCGTCAAGCTGGCCAGTGGCGGTGACCCCACATATGCCTTCAACATCCGCTTCACTGGCGAGGAGGTCCATGGCACCAGCGGCTCTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547085.1
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp CTGGCAGCCCCAGTTCCAAACAGAGAAAGGCTAGTGTGTCCCTACTaGGGACATGGCCAGGGGAGGGCGGTACCTGCTGTGCCATCTGGG +
Preference number: 6 (lower is better)
Translates to: LAAPVPNRERLVCPY*GHGQGRAVPAVPSG
Trigger: CCCAGATGGCACAGCAGGTACCGCCCTCCCCTGGCCATGTCCCAAGTAGGGACACACTAGCCTTTCTCTGTTTGGAACTGGGGCTGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547085.1
CDS CAA 90 bp AGGTTCGCTGTGGTGCCATGGACCTCCTCGCCAGTGAAGCGGATGTaGAAGGCATATGTGGGGTCACCGCCACTGGCCAGCTTGACGCAG +
Preference number: 6 (lower is better)
Translates to: RFAVVPWTSSPVKRM*KAYVGSPPLASLTQ
Trigger: CTGCGTCAAGCTGGCCAGTGGCGGTGACCCCACATATGCCTTCAACATCCGCTTCACTGGCGAGGAGGTCCATGGCACCACAGCGAACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS TCA 72 bp CTTCAAGATATGGTGAGAGGCGCTGCCCGCAGTATGTaGAGTACACCCGGCCCTTGGCTGGCTGTCCCGGAG +
Preference number: 6 (lower is better)
Translates to: LQDMVRGAARSM*STPGPWLAVPE
Trigger: CTCCGGGACAGCCAGCCAAGGGCCGGGTGTACTTCACATACTGCGGGCAGCGCCTCTCACCATATCTTGAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 72 bp CCAGGGGCCTGGACCCTGGAACCCCAGCTGGCTGCATaGCCTTGGGAAGTGACTTGGCTTTGTAGAGTCCCA +
Preference number: 6 (lower is better)
Translates to: PGAWTLEPQLAA*PWEVTWLCRVP
Trigger: TGGGACTCTACAAAGCCAAGTCACTTCCCAAGGTCATGCAGCCAGCTGGGGTTCCAGGGTCCAGGCCCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS GCA 72 bp ACCAGCAGGAGCCCCATCCTCGATGTGAAGGGCGCTTaGTCAGGTTGCTGCAACAAGCCCTGGCGTTTGAGC +
Preference number: 6 (lower is better)
Translates to: TSRSPILDVKGA*SGCCNKPWRLS
Trigger: GCTCAAACGCCAGGGCTTGTTGCAGCAACCTGAGCAAGCGCCCTTCACATCGAGGATGGGGCTCCTGCTGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp CTGTCAGCAATTCCCGCATGTGCACCAGTGCCTGCTTaGGAGTGTTTCCCCGCCGCCACCTTGTCTGTGCAG +
Preference number: 6 (lower is better)
Translates to: LSAIPACAPVPA*ECFPAATLSVQ
Trigger: CTGCACAGACAAGGTGGCGGCGGGGAAACACTCGCAAGCAGGCACTGGTGCACATGCGGGAATTGCTGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp GCAGCTGTCAGCAATTCCCGCATGTGCACCAGTGCCTaGTTGCGAGTGTTTCCCCGCCGCCACCTTGTCTGT +
Preference number: 6 (lower is better)
Translates to: AAVSNSRMCTSA*LRVFPRRHLVC
Trigger: ACAGACAAGGTGGCGGCGGGGAAACACTCGCAAGCAGGCACTGGTGCACATGCGGGAATTGCTGACAGCTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp TACGGCAGCTGTCAGCAATTCCCGCATGTGCACCAGTaGCTGCTTGCGAGTGTTTCCCCGCCGCCACCTTGT +
Preference number: 6 (lower is better)
Translates to: YGSCQQFPHVHQ*LLASVSPPPPC
Trigger: ACAAGGTGGCGGCGGGGAAACACTCGCAAGCAGGCACTGGTGCACATGCGGGAATTGCTGACAGCTGCCGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp GTGAGAAGGCTGGACACCTGCCGGGCCAGACCTGAGTaGACAGCCTCTGTGGAGCCACCTTCCTCTTTTTCC +
Preference number: 6 (lower is better)
Translates to: VRRLDTCRARPE*TASVEPPSSFS
Trigger: GGAAAAAGAGGAAGGTGGCTCCACAGAGGCTGTGCACTCAGGTCTGGCCCGGCAGGTGTCCAGCCTTCTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp GTGATAGGCCGCTTGGTGCTCACCACCTTCACGGGGTaGTGCTCCTTCCCGGCCTTGCTGTACTTGCTCTTG +
Preference number: 6 (lower is better)
Translates to: VIGRLVLTTFTG*CSFPALLYLLL
Trigger: CAAGAGCAAGTACAGCAAGGCCGGGAAGGAGCAGCACCCCGTGAAGGTGGTGAGCACCAAGCGGCCTATCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp AGATCAGCCCTTTGGCCTCCTTCAGCAGGGCGGCGATaGTGTGGGTATACATGGGTGTCTGGCGCAGCTCCA +
Preference number: 6 (lower is better)
Translates to: RSALWPPSAGRR*CGYTWVSGAAP
Trigger: TGGAGCTGCGCCAGACACCCATGTATACCCACAGCATCGCCGCCCTGCTGAAGGAGGCCAAAGGGCTGATCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp AGCGACAGCGAGGAACTCTGCAGCTCCTTACACACCTaGCACAGGAAGTGGCGGAAAGAGCCGCTGGTGCCA +
Preference number: 6 (lower is better)
Translates to: SDSEELCSSLHT*HRKWRKEPLVP
Trigger: TGGCACCAGCGGCTCTTTCCGCCACTTCCTGTGGCAGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547085.1
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp AGCCGTGCGGGTGTGATGGCGAGGTGGCGGCATAGCTaGTTGATGTACTGCACAAGTGCCACGTCCATCTCC +
Preference number: 6 (lower is better)
Translates to: SRAGVMARWRHS*LMYCTSATSIS
Trigger: GGAGATGGACGTGGCACTTGTGCAGTACATCAACCAGCTATGCCGCCACCTCGCCATCACACCCGCACGGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548588.2
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp TCATGGGGATGGAGCCGTGCGGGTGTGATGGCGAGGTaGCGGCATAGCTGGTTGATGTACTGCACAAGTGCC +
Preference number: 6 (lower is better)
Translates to: SWGWSRAGVMAR*RHSWLMYCTSA
Trigger: GGCACTTGTGCAGTACATCAACCAGCTATGCCGCCACCTCGCCATCACACCCGCACGGCTCCATCCCCATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548588.2
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp TCTCAGGGGCCGCGTGGTCCGCTGTCCTCTGCACAGTaGCATTCAGCACTCGATTCATCACGGTCACCTTCG +
Preference number: 6 (lower is better)
Translates to: SQGPRGPLSSAQ*HSALDSSRSPS
Trigger: CGAAGGTGACCGTGATGAATCGAGTGCTGAATGCCACTGTGCAGAGGACAGCGGACCACGCGGCCCCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp ATGCTGTCAACATCTGTGCGTGGCGTACGCATGCCCTaGACAGGCAGGAAGGGCTCCATCCTGATGCCTCCC +
Preference number: 6 (lower is better)
Translates to: MLSTSVRGVRMP*TGRKGSILMPP
Trigger: GGGAGGCATCAGGATGGAGCCCTTCCTGCCTGTCCAGGGCATGCGTACGCCACGCACAGATGTTGACAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS CCA 72 bp ACTGGGCAACAGCACCATGCTGTCAACATCTGTGCGTaGCGTACGCATGCCCTGGACAGGCAGGAAGGGCTC +
Preference number: 6 (lower is better)
Translates to: TGQQHHAVNICA*RTHALDRQEGL
Trigger: GAGCCCTTCCTGCCTGTCCAGGGCATGCGTACGCCACGCACAGATGTTGACAGCATGGTGCTGTTGCCCAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS CAA 72 bp GAGCCCCATCCTCGATGTGAAGGGCGCTTGCTCAGGTaGCTGCAACAAGCCCTGGCGTTTGAGCAGGGCCAA +
Preference number: 6 (lower is better)
Translates to: EPHPRCEGRLLR*LQQALAFEQGQ
Trigger: TTGGCCCTGCTCAAACGCCAGGGCTTGTTGCAGCAACCTGAGCAAGCGCCCTTCACATCGAGGATGGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp GACCAGCAGGAGCCCCATCCTCGATGTGAAGGGCGCTaGCTCAGGTTGCTGCAACAAGCCCTGGCGTTTGAG +
Preference number: 6 (lower is better)
Translates to: DQQEPHPRCEGR*LRLLQQALAFE
Trigger: CTCAAACGCCAGGGCTTGTTGCAGCAACCTGAGCAAGCGCCCTTCACATCGAGGATGGGGCTCCTGCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp GCTGTCAGCAATTCCCGCATGTGCACCAGTGCCTGCTaGCGAGTGTTTCCCCGCCGCCACCTTGTCTGTGCA +
Preference number: 6 (lower is better)
Translates to: AVSNSRMCTSAC*RVFPRRHLVCA
Trigger: TGCACAGACAAGGTGGCGGCGGGGAAACACTCGCAAGCAGGCACTGGTGCACATGCGGGAATTGCTGACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp CTTAAGGCAGTCCTGCTGACGCTGTTGAGCACAGCCTaGTCCTTGGCGGGCGGCTTGGTGATAGGCCGCTTG +
Preference number: 6 (lower is better)
Translates to: LKAVLLTLLSTA*SLAGGLVIGRL
Trigger: CAAGCGGCCTATCACCAAGCCGCCCGCCAAGGACAAGGCTGTGCTCAACAGCGTCAGCAGGACTGCCTTAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp CGTGCGGGTGTGATGGCGAGGTGGCGGCATAGCTGGTaGATGTACTGCACAAGTGCCACGTCCATCTCCAGG +
Preference number: 6 (lower is better)
Translates to: RAGVMARWRHSW*MYCTSATSISR
Trigger: CCTGGAGATGGACGTGGCACTTGTGCAGTACATCAACCAGCTATGCCGCCACCTCGCCATCACACCCGCACG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548588.2
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 90 bp GACCAGCAGGAGCCCCATCCTCGATGTGAAGGGCGCTTGCTCAGGTaGCTGCAACAAGCCCTGGCGTTTGAGCAGGGCCAAAGTTTCCTC +
Preference number: 6 (lower is better)
Translates to: DQQEPHPRCEGRLLR*LQQALAFEQGQSFL
Trigger: GAGGAAACTTTGGCCCTGCTCAAACGCCAGGGCTTGTTGCAGCAACCTGAGCAAGCGCCCTTCACATCGAGGATGGGGCTCCTGCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp TCACTTAAGGCAGTCCTGCTGACGCTGTTGAGCACAGCCTTGTCCTaGGCGGGCGGCTTGGTGATAGGCCGCTTGGTGCTCACCACCTTC +
Preference number: 6 (lower is better)
Translates to: SLKAVLLTLLSTALS*AGGLVIGRLVLTTF
Trigger: GAAGGTGGTGAGCACCAAGCGGCCTATCACCAAGCCGCCCGCCAAGGACAAGGCTGTGCTCAACAGCGTCAGCAGGACTGCCTTAAGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 90 bp GGATGGAGCCGTGCGGGTGTGATGGCGAGGTGGCGGCATAGCTGGTaGATGTACTGCACAAGTGCCACGTCCATCTCCAGGGTCCACTTT +
Preference number: 6 (lower is better)
Translates to: GWSRAGVMARWRHSW*MYCTSATSISRVHF
Trigger: AAAGTGGACCCTGGAGATGGACGTGGCACTTGTGCAGTACATCAACCAGCTATGCCGCCACCTCGCCATCACACCCGCACGGCTCCATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548588.2
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 72 bp GTTAGTGAGAAGGCTGGACACCTGCCGGGCCAGACCTaGGTGCACAGCCTCTGTGGAGCCACCTTCCTCTTT +
Preference number: 6 (lower is better)
Translates to: VSEKAGHLPGQT*VHSLCGATFLF
Trigger: AAAGAGGAAGGTGGCTCCACAGAGGCTGTGCACTCAGGTCTGGCCCGGCAGGTGTCCAGCCTTCTCACTAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp TGTCTTCTTCCTGCAGCGGGATGTAGATCTCGTCTTTaGAGACCCCGCCGTGGGCGTTGCAGGCCTTGCGGA +
Preference number: 6 (lower is better)
Translates to: CLLPAAGCRSRL*RPRRGRCRPCG
Trigger: TCCGCAAGGCCTGCAACGCCCACGGCGGGGTCTTCAAAGACGAGATCTACATCCCGCTGCAGGAAGAAGACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp AGCCCCATCCTCGATGTGAAGGGCGCTTGCTCAGGTTaGTGCAACAAGCCCTGGCGTTTGAGCAGGGCCAAA +
Preference number: 6 (lower is better)
Translates to: SPILDVKGACSG*CNKPWRLSRAK
Trigger: TTTGGCCCTGCTCAAACGCCAGGGCTTGTTGCAGCAACCTGAGCAAGCGCCCTTCACATCGAGGATGGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp TGTTTCGTCAGCTCTAAAAGGCTCTCCTCGCCCTGGTaGAGGGTCCGGGTGATGGCCACGTTGAGCCACTCT +
Preference number: 6 (lower is better)
Translates to: CFVSSKRLSSPW*RVRVMATLSHS
Trigger: AGAGTGGCTCAACGTGGCCATCACCCGGACCCTGCACCAGGGCGAGGAGAGCCTTTTAGAGCTGACGAAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp GTGGCCGAGGCCATATACGAGCACCCGTGCCCACGGTaGCTTGTACAGAGAGGAGTCTTTGCGGAATCCAGA +
Preference number: 6 (lower is better)
Translates to: VAEAIYEHPCPR*LVQRGVFAESR
Trigger: TCTGGATTCCGCAAAGACTCCTCTCTGTACAAGGCACCGTGGGCACGGGTGCTCGTATATGGCCTCGGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp ATAGGCCGCTTGGTGCTCACCACCTTCACGGGGTGCTaGTCCTTCCCGGCCTTGCTGTACTTGCTCTTGTCA +
Preference number: 6 (lower is better)
Translates to: IGRLVLTTFTGC*SFPALLYLLLS
Trigger: TGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGCAGCACCCCGTGAAGGTGGTGAGCACCAAGCGGCCTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp AAGGTGATCTCAGGGGCCGCGTGGTCCGCTGTCCTCTaGACAGTGGCATTCAGCACTCGATTCATCACGGTC +
Preference number: 6 (lower is better)
Translates to: KVISGAAWSAVL*TVAFSTRFITV
Trigger: GACCGTGATGAATCGAGTGCTGAATGCCACTGTGCAGAGGACAGCGGACCACGCGGCCCCTGAGATCACCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp AGCGACAGCGAGGAACTCTGCAGCTCCTTACACACCTaGCACAGGAAGTGGCGGAAAGAGCCGCCTCTGCTT +
Preference number: 6 (lower is better)
Translates to: SDSEELCSSLHT*HRKWRKEPPLL
Trigger: AAGCAGAGGCGGCTCTTTCCGCCACTTCCTGTGGCAGGTGTGTAAGGAGCTGCAGAGTTCCTCGCTGTCGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651701.1
CDS CCA 72 bp GGTTGGCAAGCACCTGGAAGGCAGCCCAGGCCATGGTaGCCACCTTCTGCTTCTTGGTCTGTTTCTCACTGG +
Preference number: 6 (lower is better)
Translates to: GWQAPGRQPRPW*PPSASWSVSHW
Trigger: CCAGTGAGAAACAGACCAAGAAGCAGAAGGTGGCCACCATGGCCTGGGCTGCCTTCCAGGTGCTTGCCAACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp ATCTGTTTCGTCAGCTCTAAAAGGCTCTCCTCGCCCTaGTGCAGGGTCCGGGTGATGGCCACGTTGAGCCAC +
Preference number: 6 (lower is better)
Translates to: ICFVSSKRLSSP*CRVRVMATLSH
Trigger: GTGGCTCAACGTGGCCATCACCCGGACCCTGCACCAGGGCGAGGAGAGCCTTTTAGAGCTGACGAAACAGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp ATTTCCAGTGGGTCCAAGGTGATCTCAGGGGCCGCGTaGTCCGCTGTCCTCTGCACAGTGGCATTCAGCACT +
Preference number: 6 (lower is better)
Translates to: ISSGSKVISGAA*SAVLCTVAFST
Trigger: AGTGCTGAATGCCACTGTGCAGAGGACAGCGGACCACGCGGCCCCTGAGATCACCTTGGACCCACTGGAAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp CCAGTGCCTGCTTGCGAGTGTTTCCCCGCCGCCACCTaGTCTGTGCAGCCAAAAGGAAACTGCTGCTGGACA +
Preference number: 6 (lower is better)
Translates to: PVPACECFPAAT*SVQPKGNCCWT
Trigger: TGTCCAGCAGCAGTTTCCTTTTGGCTGCACAGACAAGGTGGCGGCGGGGAAACACTCGCAAGCAGGCACTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp GCCTCGATGAGGTTCAGCTGGCCATTTCGCTTCACTTaGTGGCCGAGGCCATATACGAGCACCCGTGCCCAC +
Preference number: 6 (lower is better)
Translates to: ASMRFSWPFRFT*WPRPYTSTRAH
Trigger: GTGGGCACGGGTGCTCGTATATGGCCTCGGCCACAAAGTGAAGCGAAATGGCCAGCTGAACCTCATCGAGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 90 bp GCATGTGCACCAGTGCCTGCTTGCGAGTGTTTCCCCGCCGCCACCTaGTCTGTGCAGCCAAAAGGAAACTGCTGCTGGACACAGCTTGGT +
Preference number: 6 (lower is better)
Translates to: ACAPVPACECFPAAT*SVQPKGNCCWTQLG
Trigger: ACCAAGCTGTGTCCAGCAGCAGTTTCCTTTTGGCTGCACAGACAAGGTGGCGGCGGGGAAACACTCGCAAGCAGGCACTGGTGCACATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp TCTACAGGTGGCCCAATGCTGACGATGAGGCCTGACTGTGCCCACTaGGTGGCTTTCCGCAGGGCGGCTGCAGCCTCTTCTGTAATCACT +
Preference number: 6 (lower is better)
Translates to: STGGPMLTMRPDCAH*VAFRRAAAASSVIT
Trigger: AGTGATTACAGAAGAGGCTGCAGCCGCCCTGCGGAAAGCCACCAAGTGGGCACAGTCAGGCCTCATCGTCAGCATTGGGCCACCTGTAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp CGCTTGGTGCTCACCACCTTCACGGGGTGCTGCTCCTTCCCGGCCTaGCTGTACTTGCTCTTGTCAAACTTGGGCTTTGGCACGCCATAC +
Preference number: 6 (lower is better)
Translates to: RLVLTTFTGCCSFPA*LYLLLSNLGFGTPY
Trigger: GTATGGCGTGCCAAAGCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGCAGCACCCCGTGAAGGTGGTGAGCACCAAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 90 bp CTCACCACCTTCACGGGGTGCTGCTCCTTCCCGGCCTTGCTGTACTaGCTCTTGTCAAACTTGGGCTTTGGCACGCCATACTTCCTCAGG +
Preference number: 6 (lower is better)
Translates to: LTTFTGCCSFPALLY*LLSNLGFGTPYFLR
Trigger: CCTGAGGAAGTATGGCGTGCCAAAGCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGCAGCACCCCGTGAAGGTGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 72 bp GCACACAGTGCGGCAACGGCCTGGCGTGCAATTCTCTaGAGTTTGGCAAGTTTCCTGCCACTGCTGCTGCCA +
Preference number: 6 (lower is better)
Translates to: AHSAATAWRAIL*SLASFLPLLLP
Trigger: TGGCAGCAGCAGTGGCAGGAAACTTGCCAAACTTCAGAGAATTGCACGCCAGGCCGTTGCCGCACTGTGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp ACTTCGGCCACAGCCAGGCACCCTTCCATGAGTGCATaGAAATACGTAGAGAACCTGCCCTGGTCACCGGCC +
Preference number: 6 (lower is better)
Translates to: TSATARHPSMSA*KYVENLPWSPA
Trigger: GGCCGGTGACCAGGGCAGGTTCTCTACGTATTTTCATGCACTCATGGAAGGGTGCCTGGCTGTGGCCGAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp CCCATCCTCGATGTGAAGGGCGCTTGCTCAGGTTGCTaGAACAAGCCCTGGCGTTTGAGCAGGGCCAAAGTT +
Preference number: 6 (lower is better)
Translates to: PILDVKGACSGC*NKPWRLSRAKV
Trigger: AACTTTGGCCCTGCTCAAACGCCAGGGCTTGTTGCAGCAACCTGAGCAAGCGCCCTTCACATCGAGGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp CACTTGTTCCACCAAAAAGAGATCGGGTGGCAGAGCTaGCTGATCCCCCTGGAGGAGGCACCAGCATCACCA +
Preference number: 6 (lower is better)
Translates to: HLFHQKEIGWQS*LIPLEEAPASP
Trigger: TGGTGATGCTGGTGCCTCCTCCAGGGGGATCAGGCAGCTCTGCCACCCGATCTCTTTTTGGTGGAACAAGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp CTGCTTGCGAGTGTTTCCCCGCCGCCACCTTGTCTGTaGAGCCAAAAGGAAACTGCTGCTGGACACAGCTTG +
Preference number: 6 (lower is better)
Translates to: LLASVSPPPPCL*SQKETAAGHSL
Trigger: CAAGCTGTGTCCAGCAGCAGTTTCCTTTTGGCTGCACAGACAAGGTGGCGGCGGGGAAACACTCGCAAGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp CCACCAGAGACGTCTTCAAGATATGGTGAGAGGCGCTaGCCGCAGTATGTGAAGTACACCCGGCCCTTGGCT +
Preference number: 6 (lower is better)
Translates to: PPETSSRYGERR*PQYVKYTRPLA
Trigger: AGCCAAGGGCCGGGTGTACTTCACATACTGCGGGCAGCGCCTCTCACCATATCTTGAAGACGTCTCTGGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp CTTCACTTTGTGGCCGAGGCCATATACGAGCACCCGTaGCCACGGTGCCTTGTACAGAGAGGAGTCTTTGCG +
Preference number: 6 (lower is better)
Translates to: LHFVAEAIYEHP*PRCLVQRGVFA
Trigger: CGCAAAGACTCCTCTCTGTACAAGGCACCGTGGGCACGGGTGCTCGTATATGGCCTCGGCCACAAAGTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp CCTCTCATCAGGGAACAGCCTGCACTTCTGGTCTGGTaGACCACACGGGGAACAGCCCACCTCAGCAAAAAC +
Preference number: 6 (lower is better)
Translates to: PLIREQPALLVW*TTRGTAHLSKN
Trigger: GTTTTTGCTGAGGTGGGCTGTTCCCCGTGTGGTGCACCAGACCAGAAGTGCAGGCTGTTCCCTGATGAGAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000547352.1
CDS CCA 72 bp TCCCTTTCATGCTGTTCTTCTAAGGCCAGCTGGCGCTaGGCATTCCACAGTCCTCGCAAGGCATTCAGGCGG +
Preference number: 6 (lower is better)
Translates to: SLSCCSSKASWR*AFHSPRKAFRR
Trigger: CCGCCTGAATGCCTTGCGAGGACTGTGGAATGCCCAGCGCCAGCTGGCCTTAGAAGAACAGCATGAAAGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550724.2
ENST00000682272.1
CDS CCA 72 bp GAGACGGGCGTTGGTCAAGCAGCAGGGAGAGGAGTTTaGACACACAAGCTGGCTGGCTCAGGATGGCTTTAC +
Preference number: 6 (lower is better)
Translates to: ETGVGQAAGRGV*THKLAGSGWLY
Trigger: GTAAAGCCATCCTGAGCCAGCCAGCTTGTGTGTCCAAACTCCTCTCCCTGCTGCTTGACCAACGCCCGTCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp CTAAGAGCAGGGAGGCGATCTTGGAAGCTGGGTCGCTaGGATCCTCCTGCTCACTGTTTAAGGAGGGGACAG +
Preference number: 6 (lower is better)
Translates to: LRAGRRSWKLGR*DPPAHCLRRGQ
Trigger: CTGTCCCCTCCTTAAACAGTGAGCAGGAGGATCCCAGCGACCCAGCTTCCAAGATCGCCTCCCTGCTCTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp GACAGGAGGTGTCACTATCATATTGTTGCTGAGCGGTaGCCACGGCAGCAATCCGGCATGGTGGCCCATGAG +
Preference number: 6 (lower is better)
Translates to: DRRCHYHIVAER*PRQQSGMVAHE
Trigger: CTCATGGGCCACCATGCCGGATTGCTGCCGTGGCCACCGCTCAGCAACAATATGATAGTGACACCTCCTGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp TCGATGAGGTTCAGCTGGCCATTTCGCTTCACTTTGTaGCCGAGGCCATATACGAGCACCCGTGCCCACGGT +
Preference number: 6 (lower is better)
Translates to: SMRFSWPFRFTL*PRPYTSTRAHG
Trigger: ACCGTGGGCACGGGTGCTCGTATATGGCCTCGGCCACAAAGTGAAGCGAAATGGCCAGCTGAACCTCATCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp GCAGCTCCACCACCTGCAGGAGGACGGATGTCGGAATaGTGTCAGGCTCATCTTCGGACTTCCCTTCACTGT +
Preference number: 6 (lower is better)
Translates to: AAPPPAGGRMSE*CQAHLRTSLHC
Trigger: ACAGTGAAGGGAAGTCCGAAGATGAGCCTGACACCATTCCGACATCCGTCCTCCTGCAGGTGGTGGAGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp TTCAGAAGCTCTGATTTCCCCTCCCACAATTTCCAGTaGGTCCAAGGTGATCTCAGGGGCCGCGTGGTCCGC +
Preference number: 6 (lower is better)
Translates to: FRSSDFPSHNFQ*VQGDLRGRVVR
Trigger: GCGGACCACGCGGCCCCTGAGATCACCTTGGACCCACTGGAAATTGTGGGAGGGGAAATCAGAGCTTCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp TTCTCGGGCTCAACTTTCCCGTCCCCGCCCTCGGCCTaGTCTTTTGGCTTCTTGGTGTCTTCTTCCTGCAGC +
Preference number: 6 (lower is better)
Translates to: FSGSTFPSPPSA*SFGFLVSSSCS
Trigger: GCTGCAGGAAGAAGACACCAAGAAGCCAAAAGACAAGGCCGAGGGCGGGGACGGGAAAGTTGAGCCCGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp CTCACCACCTTCACGGGGTGCTGCTCCTTCCCGGCCTaGCTGTACTTGCTCTTGTCAAACTTGGGCTTTGGC +
Preference number: 6 (lower is better)
Translates to: LTTFTGCCSFPA*LYLLLSNLGFG
Trigger: GCCAAAGCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGCAGCACCCCGTGAAGGTGGTGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp CCAGTTCCAAACAGAGAAAGGCTAGTGTGTCCCTACTaGGGACATGGCCAGGGGAGGGCGGTACCTGCTGTG +
Preference number: 6 (lower is better)
Translates to: PVPNRERLVCPY*GHGQGRAVPAV
Trigger: CACAGCAGGTACCGCCCTCCCCTGGCCATGTCCCAAGTAGGGACACACTAGCCTTTCTCTGTTTGGAACTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547085.1
CDS CAA 90 bp TCTTCTCGGGCTCAACTTTCCCGTCCCCGCCCTCGGCCTTGTCTTTaGGCTTCTTGGTGTCTTCTTCCTGCAGCGGGATGTAGATCTCGT +
Preference number: 6 (lower is better)
Translates to: SSRAQLSRPRPRPCL*ASWCLLPAAGCRSR
Trigger: ACGAGATCTACATCCCGCTGCAGGAAGAAGACACCAAGAAGCCAAAAGACAAGGCCGAGGGCGGGGACGGGAAAGTTGAGCCCGAGAAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 90 bp ACCTTCACGGGGTGCTGCTCCTTCCCGGCCTTGCTGTACTTGCTCTaGTCAAACTTGGGCTTTGGCACGCCATACTTCCTCAGGATCTGG +
Preference number: 6 (lower is better)
Translates to: TFTGCCSFPALLYLL*SNLGFGTPYFLRIW
Trigger: CCAGATCCTGAGGAAGTATGGCGTGCCAAAGCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGCAGCACCCCGTGAAGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 90 bp ACCCCCAGCCCACTGTGGGTGTTCTTCCACCCTTTAGACAATGCCTaGTCATCCCTGTTTCTACCGAGAAGCCACTGGCATCCGGGACTC +
Preference number: 6 (lower is better)
Translates to: TPSPLWVFFHPLDNA*SSLFLPRSHWHPGL
Trigger: GAGTCCCGGATGCCAGTGGCTTCTCGGTAGAAACAGGGATGACAAGGCATTGTCTAAAGGGTGGAAGAACACCCACAGTGGGCTGGGGGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS TCA 72 bp TGTTCCACCAAAAAGAGATCGGGTGGCAGAGCTGCCTaGTCCCCCTGGAGGAGGCACCAGCATCACCAAGTA +
Preference number: 6 (lower is better)
Translates to: CSTKKRSGGRAA*SPWRRHQHHQV
Trigger: TACTTGGTGATGCTGGTGCCTCCTCCAGGGGGATCAGGCAGCTCTGCCACCCGATCTCTTTTTGGTGGAACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp TGCTGCTGGACACAGCTTGGTCAGGGTTGGTGCCGATaGAAGCAAACAGCTGCCCTAGCAGGACACTGTAGG +
Preference number: 6 (lower is better)
Translates to: CCWTQLGQGWCR*KQTAALAGHCR
Trigger: CCTACAGTGTCCTGCTAGGGCAGCTGTTTGCTTTCATCGGCACCAACCCTGACCAAGCTGTGTCCAGCAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp TGGCCACATGCCACCAGAGACGTCTTCAAGATATGGTaGGAGGCGCTGCCCGCAGTATGTGAAGTACACCCG +
Preference number: 6 (lower is better)
Translates to: WPHATRDVFKIW*EALPAVCEVHP
Trigger: CGGGTGTACTTCACATACTGCGGGCAGCGCCTCTCACCATATCTTGAAGACGTCTCTGGTGGCATGTGGCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp TCTCTCATCAGGGAACAGCCTGCACTTCTGGTCTGGTaGACCACACGGGGAACAGCCCACCTCAGCAAAAAC +
Preference number: 6 (lower is better)
Translates to: SLIREQPALLVW*TTRGTAHLSKN
Trigger: GTTTTTGCTGAGGTGGGCTGTTCCCCGTGTGGTGCACCAGACCAGAAGTGCAGGCTGTTCCCTGATGAGAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp TATCGAAAGAGACAGGCCGGTGGAGAAGACTGCCGCTaGCAAAAGCCACCCATCCTGGTTCCAACTCCTCGT +
Preference number: 6 (lower is better)
Translates to: YRKRQAGGEDCR*QKPPILVPTPR
Trigger: ACGAGGAGTTGGAACCAGGATGGGTGGCTTTTGGCAGCGGCAGTCTTCTCCACCGGCCTGTCTCTTTCGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp CTTCTCGTGAGGCCCGACTGGGCTGCGATGGTGACATaGAGCAACAGCTCGGCTCGGTTCATTAAACTCTTC +
Preference number: 6 (lower is better)
Translates to: LLVRPDWAAMVT*SNSSARFIKLF
Trigger: GAAGAGTTTAATGAACCGAGCCGAGCTGTTGCTGCATGTCACCATCGCAGCCCAGTCGGGCCTCACGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp GCCTCCAAGTGCACACAGTGCGGCAACGGCCTGGCGTaGAATTCTCTGAAGTTTGGCAAGTTTCCTGCCACT +
Preference number: 6 (lower is better)
Translates to: ASKCTQCGNGLA*NSLKFGKFPAT
Trigger: AGTGGCAGGAAACTTGCCAAACTTCAGAGAATTGCACGCCAGGCCGTTGCCGCACTGTGTGCACTTGGAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp GCGTCTTCGGATGGTAGGAAAAACCTTGGTCTCCCATaGTTTCACCAGCAGGGCGTAGTGGTCCTCCTGAGG +
Preference number: 6 (lower is better)
Translates to: ASSDGRKNLGLP*FHQQGVVVLLR
Trigger: CCTCAGGAGGACCACTACGCCCTGCTGGTGAAAGCATGGGAGACCAAGGTTTTTCCTACCATCCGAAGACGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp GTGGTCCACAAGAAGTTTCCTAGCAGCTCCACCACCTaGAGGAGGACGGATGTCGGAATGGTGTCAGGCTCA +
Preference number: 6 (lower is better)
Translates to: VVHKKFPSSSTT*RRTDVGMVSGS
Trigger: TGAGCCTGACACCATTCCGACATCCGTCCTCCTGCAGGTGGTGGAGCTGCTAGGAAACTTCTTGTGGACCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp TCACGGGGTGCTGCTCCTTCCCGGCCTTGCTGTACTTaGTCTTGTCAAACTTGGGCTTTGGCACGCCATACT +
Preference number: 6 (lower is better)
Translates to: SRGAAPSRPCCT*SCQTWALARHT
Trigger: AGTATGGCGTGCCAAAGCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGCAGCACCCCGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp TCACCACCTTCACGGGGTGCTGCTCCTTCCCGGCCTTaGTGTACTTGCTCTTGTCAAACTTGGGCTTTGGCA +
Preference number: 6 (lower is better)
Translates to: SPPSRGAAPSRP*CTCSCQTWALA
Trigger: TGCCAAAGCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGCAGCACCCCGTGAAGGTGGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp GTGATGGCGAGGTGGCGGCATAGCTGGTTGATGTACTaGACAAGTGCCACGTCCATCTCCAGGGTCCACTTT +
Preference number: 6 (lower is better)
Translates to: VMARWRHSWLMY*TSATSISRVHF
Trigger: AAAGTGGACCCTGGAGATGGACGTGGCACTTGTGCAGTACATCAACCAGCTATGCCGCCACCTCGCCATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548588.2
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp AGCAGTCAGGCTGAGATCTCGGCCAGGTGGCTGAGATaGCTGACTCACAGGCAACACAGGCAACCCTATCAT +
Preference number: 6 (lower is better)
Translates to: SSQAEISARWLR*LTHRQHRQPYH
Trigger: ATGATAGGGTTGCCTGTGTTGCCTGTGAGTCAGGCATCTCAGCCACCTGGCCGAGATCTCAGCCTGACTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000548588.2
ENST00000651701.1
CDS CCA 72 bp CATTCTCTCATCAGGGAACAGCCTGCACTTCTGGTCTaGTGCACCACACGGGGAACAGCCCACCTCAGCAAA +
Preference number: 6 (lower is better)
Translates to: HSLIREQPALLV*CTTRGTAHLSK
Trigger: TTTGCTGAGGTGGGCTGTTCCCCGTGTGGTGCACCAGACCAGAAGTGCAGGCTGTTCCCTGATGAGAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp GTGAAGGGCGCTTGCTCAGGTTGCTGCAACAAGCCCTaGCGTTTGAGCAGGGCCAAAGTTTCCTCATCACCT +
Preference number: 6 (lower is better)
Translates to: VKGACSGCCNKP*RLSRAKVSSSP
Trigger: AGGTGATGAGGAAACTTTGGCCCTGCTCAAACGCCAGGGCTTGTTGCAGCAACCTGAGCAAGCGCCCTTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp TTCAATTCTGGGTCCTCCCTGAAGGACCATCGTCACTaGACCCACAAGATGCGTCACTCCCCCGACTCGTAC +
Preference number: 6 (lower is better)
Translates to: FNSGSSLKDHRH*THKMRHSPDSY
Trigger: GTACGAGTCGGGGGAGTGACGCATCTTGTGGGTCCAGTGACGATGGTCCTTCAGGGAGGACCCAGAATTGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp TATTTCCCATCCCATCCAGCACAAGAGAGCTCCTGGTaGCCAGCCCAGAAACTGTCCAGGTGGAAGACTGCC +
Preference number: 6 (lower is better)
Translates to: YFPSHPAQESSW*PAQKLSRWKTA
Trigger: GGCAGTCTTCCACCTGGACAGTTTCTGGGCTGGCCACCAGGAGCTCTCTTGTGCTGGATGGGATGGGAAATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547352.1
CDS CCA 72 bp GGCCTCTGTCCCCATGAAATAAGCCTTCCTGGCACATaGCTCACACCCCTAAGGTCCTCTGTGGGATCCCAA +
Preference number: 6 (lower is better)
Translates to: GLCPHEISLPGT*LTPLRSSVGSQ
Trigger: TTGGGATCCCACAGAGGACCTTAGGGGTGTGAGCCATGTGCCAGGAAGGCTTATTTCATGGGGACAGAGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS CAA 72 bp GTGCCTGGGTCTGATGCAATACTGGTGCCAGCATCATaGTCACTGTCAGATGCCATGGCGAAAGGCAGGGCC +
Preference number: 6 (lower is better)
Translates to: VPGSDAILVPAS*SLSDAMAKGRA
Trigger: GGCCCTGCCTTTCGCCATGGCATCTGACAGTGACAATGATGCTGGCACCAGTATTGCATCAGACCCAGGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp GGGTGCTGCTCCTTCCCGGCCTTGCTGTACTTGCTCTaGTCAAACTTGGGCTTTGGCACGCCATACTTCCTC +
Preference number: 6 (lower is better)
Translates to: GCCSFPALLYLL*SNLGFGTPYFL
Trigger: GAGGAAGTATGGCGTGCCAAAGCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGCAGCACCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp TTCACGGGGTGCTGCTCCTTCCCGGCCTTGCTGTACTaGCTCTTGTCAAACTTGGGCTTTGGCACGCCATAC +
Preference number: 6 (lower is better)
Translates to: FTGCCSFPALLY*LLSNLGFGTPY
Trigger: GTATGGCGTGCCAAAGCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCGGGAAGGAGCAGCACCCCGTGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 72 bp AGTGATGCCAATGCTGCTGACTGGTGGGCCAAATTTTaGGAGCCCCTAGTCTGGAATACTGCCTGGTGGGCC +
Preference number: 6 (lower is better)
Translates to: SDANAADWWAKF*EPLVWNTAWWA
Trigger: GGCCCACCAGGCAGTATTCCAGACTAGGGGCTCTCAAAATTTGGCCCACCAGTCAGCAGCATTGGCATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311694.7
CDS TCA 72 bp AGGCTTCCTGGACCTGCTCGACCATCCCACCACATGTaGGTTCTTCAATTCTGGGTCCTCCCTGAAGGACCA +
Preference number: 6 (lower is better)
Translates to: RLPGPARPSHHM*VLQFWVLPEGP
Trigger: TGGTCCTTCAGGGAGGACCCAGAATTGAAGAACTCACATGTGGTGGGATGGTCGAGCAGGTCCAGGAAGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp AGCAATCCGGCATGGTGGCCCATGAGTGCCTGGGTCTaGTGCAATACTGGTGCCAGCATCATTGTCACTGTC +
Preference number: 6 (lower is better)
Translates to: SNPAWWPMSAWV*CNTGASIIVTV
Trigger: GACAGTGACAATGATGCTGGCACCAGTATTGCATCAGACCCAGGCACTCATGGGCCACCATGCCGGATTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 72 bp CACAAGTGCCACGTCCATCTCCAGGGTCCACTTTCTTaGGGCCTTCTGTGCATGTCGGACATCGATGCATGC +
Preference number: 6 (lower is better)
Translates to: HKCHVHLQGPLS*GLLCMSDIDAC
Trigger: GCATGCATCGATGTCCGACATGCACAGAAGGCCTCAAGAAAGTGGACCCTGGAGATGGACGTGGCACTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548588.2
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 72 bp CTGTATGGCTGGTTCCTGCCGGGCCCTAATCCTCAATaGTGTCTGAGTTTTGGCACGTGGGGCTCCTGTTCA +
Preference number: 6 (lower is better)
Translates to: LYGWFLPGPNPQ*CLSFGTWGSCS
Trigger: TGAACAGGAGCCCCACGTGCCAAAACTCAGACATCATTGAGGATTAGGGCCCGGCAGGAACCAGCCATACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547085.1
CDS TCA 72 bp GACTGGAGAGCCTACCATCTACTGCCAGCCCTGATCTaGGTCCCTGAGGAAAGCTCAGGCAAGTCAATTGGC +
Preference number: 6 (lower is better)
Translates to: DWRAYHLLPALI*VPEESSGKSIG
Trigger: GCCAATTGACTTGCCTGAGCTTTCCTCAGGGACTCAGATCAGGGCTGGCAGTAGATGGTAGGCTCTCCAGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550968.5
CDS GCA 72 bp TGTGACCAGCCCATTGGTGGCAGTCCTTCGGTAGCCTaGTGGGGGCCTTTCCAACATGTCAATAGGATACCA +
Preference number: 6 (lower is better)
Translates to: CDQPIGGSPSVA*WGPFQHVNRIP
Trigger: TGGTATCCTATTGACATGTTGGAAAGGCCCCCAGCAGGCTACCGAAGGACTGCCACCAATGGGCTGGTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548896.1
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp AAAAGAGGTCCGTGGCGGAGCAGTTCTGGGAATGGATaGAATGCTGTAAAGACTGCGCCAGGAGGATCGAGC +
Preference number: 6 (lower is better)
Translates to: KRGPWRSSSGNG*NAVKTAPGGSS
Trigger: GCTCGATCCTCCTGGCGCAGTCTTTACAGCATTGCATCCATTCCCAGAACTGCTCCGCCACGGACCTCTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp GAAGCAGCATTCATTACCTCTCATCAGGGAACAGCCTaGACTTCTGGTCTGGTGCACCACACGGGGAACAGC +
Preference number: 6 (lower is better)
Translates to: EAAFITSHQGTA*TSGLVHHTGNS
Trigger: GCTGTTCCCCGTGTGGTGCACCAGACCAGAAGTGCAGGCTGTTCCCTGATGAGAGGTAATGAATGCTGCTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547352.1
CDS GCA 72 bp TGCACCAGTTCATTCACCGTGTCATCCAAGCTGGAGTaGAGTGGTGTCATCTCGGCACACTGCAGTCTCTGC +
Preference number: 6 (lower is better)
Translates to: CTSSFTVSSKLE*SGVISAHCSLC
Trigger: GCAGAGACTGCAGTGTGCCGAGATGACACCACTGCACTCCAGCTTGGATGACACGGTGAATGAACTGGTGCA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548896.1
CDS GCA 72 bp AAGGCGATCACTTCTGCAGCCATGCTGTTTGCCACATaGCCACTGATGAAGGGACGCACAGGATCAGTCCTG +
Preference number: 6 (lower is better)
Translates to: KAITSAAMLFAT*PLMKGRTGSVL
Trigger: CAGGACTGATCCTGTGCGTCCCTTCATCAGTGGGCATGTGGCAAACAGCATGGCTGCAGAAGTGATCGCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS CCA 72 bp TCTAACATTCTCTCATCAGGGAACAGCCTGCACTTCTaGTCTGGTGCACCACACGGGGAACAGCCCACCTCA +
Preference number: 6 (lower is better)
Translates to: SNILSSGNSLHF*SGAPHGEQPTS
Trigger: TGAGGTGGGCTGTTCCCCGTGTGGTGCACCAGACCAGAAGTGCAGGCTGTTCCCTGATGAGAGAATGTTAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp TTGCTGCTTGATCCTCTTTCAGTGTGTTGGAGATGGTaGAACCAGTCAGGGCAGCAAGCGTTGCTGACGGGG +
Preference number: 6 (lower is better)
Translates to: LLLDPLSVCWRW*NQSGQQALLTG
Trigger: CCCCGTCAGCAACGCTTGCTGCCCTGACTGGTTCCACCATCTCCAACACACTGAAAGAGGATCAAGCAGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp GACACAACAGAGGTCATGGTCTCGCCAAAGGCTTCCTaGACCTGCTCGACCATCCCACCACATGTGAGTTCT +
Preference number: 6 (lower is better)
Translates to: DTTEVMVSPKAS*TCSTIPPHVSS
Trigger: AGAACTCACATGTGGTGGGATGGTCGAGCAGGTCCAGGAAGCCTTTGGCGAGACCATGACCTCTGTTGTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp AGCAGCAGGGAGAGGAGTTTGGACACACAAGCTGGCTaGCTCAGGATGGCTTTACCTATGTGGCTCCTTGAG +
Preference number: 6 (lower is better)
Translates to: SSRERSLDTQAG*LRMALPMWLLE
Trigger: CTCAAGGAGCCACATAGGTAAAGCCATCCTGAGCCAGCCAGCTTGTGTGTCCAAACTCCTCTCCCTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp GTCAAGCAGCAGGGAGAGGAGTTTGGACACACAAGCTaGCTGGCTCAGGATGGCTTTACCTATGTGGCTCCT +
Preference number: 6 (lower is better)
Translates to: VKQQGEEFGHTS*LAQDGFTYVAP
Trigger: AGGAGCCACATAGGTAAAGCCATCCTGAGCCAGCCAGCTTGTGTGTCCAAACTCCTCTCCCTGCTGCTTGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp GGAAAACAAGCTCCTTCACGCAGGCTGCCATGTCCGTaGTCCACAAGAAGTTTCCTAGCAGCTCCACCACCT +
Preference number: 6 (lower is better)
Translates to: GKQAPSRRLPCP*STRSFLAAPPP
Trigger: AGGTGGTGGAGCTGCTAGGAAACTTCTTGTGGACCACGGACATGGCAGCCTGCGTGAAGGAGCTTGTTTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp CCTTCCCGGCCTTGCTGTACTTGCTCTTGTCAAACTTaGGCTTTGGCACGCCATACTTCCTCAGGATCTGGG +
Preference number: 6 (lower is better)
Translates to: PSRPCCTCSCQT*ALARHTSSGSG
Trigger: CCCAGATCCTGAGGAAGTATGGCGTGCCAAAGCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCGGGAAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp CTGTTTCTACCGAGAAGCCACTGGCATCCGGGACTCTaGCTCTGCTATTGTCTTGCAATGGCTGCCCTGAGT +
Preference number: 6 (lower is better)
Translates to: LFLPRSHWHPGL*LCYCLAMAALS
Trigger: ACTCAGGGCAGCCATTGCAAGACAATAGCAGAGCCAGAGTCCCGGATGCCAGTGGCTTCTCGGTAGAAACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS CAA 72 bp TGTTGGAGATGGTGGAACCAGTCAGGGCAGCAAGCGTaGCTGACGGGGAGGCTCTATACCGAGAAAGTCTAC +
Preference number: 6 (lower is better)
Translates to: CWRWWNQSGQQA*LTGRLYTEKVY
Trigger: GTAGACTTTCTCGGTATAGAGCCTCCCCGTCAGCAACGCTTGCTGCCCTGACTGGTTCCACCATCTCCAACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp GCACAAGTGCCACGTCCATCTCCAGGGTCCACTTTCTaGAGGCCTTCTGTGCATGTCGGACATCGATGCATG +
Preference number: 6 (lower is better)
Translates to: AQVPRPSPGSTF*RPSVHVGHRCM
Trigger: CATGCATCGATGTCCGACATGCACAGAAGGCCTCAAGAAAGTGGACCCTGGAGATGGACGTGGCACTTGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548588.2
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 90 bp AAGGCCCCCTTTATCTGGTCCAGGCCCGATTTCCGCTCTGCTTCATaGCGGAAGCGTCTTCGGATGGTAGGAAAAACCTTGGTCTCCCAT +
Preference number: 6 (lower is better)
Translates to: KAPFIWSRPDFRSAS*RKRLRMVGKTLVSH
Trigger: ATGGGAGACCAAGGTTTTTCCTACCATCCGAAGACGCTTCCGCAATGAAGCAGAGCGGAAATCGGGCCTGGACCAGATAAAGGGGGCCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 72 bp GCGCTTGCTCAGGTTGCTGCAACAAGCCCTGGCGTTTaGGCAGGGCCAAAGTTTCCTCATCACCTGAACTTT +
Preference number: 6 (lower is better)
Translates to: ALAQVAATSPGV*AGPKFPHHLNF
Trigger: AAAGTTCAGGTGATGAGGAAACTTTGGCCCTGCTCAAACGCCAGGGCTTGTTGCAGCAACCTGAGCAAGCGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp ACTCGGTCTGATTGCTCAAGCTACACAGTCGATCCATaGGCTGCACAAGGCCACTGCGTACCAGGCACTTCT +
Preference number: 6 (lower is better)
Translates to: TRSDCSSYTVDP*AAQGHCVPGTS
Trigger: AGAAGTGCCTGGTACGCAGTGGCCTTGTGCAGCTCATGGATCGACTGTGTAGCTTGAGCAATCAGACCGAGT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp GCTCCCTGTGAATTTGAAGGTTGGTATTGTCCAGTGTaGCCAGCCCATTGGTGGCAGTCCTTCGGTAGCCTG +
Preference number: 6 (lower is better)
Translates to: APCEFEGWYCPV*PAHWWQSFGSL
Trigger: CAGGCTACCGAAGGACTGCCACCAATGGGCTGGTCACACTGGACAATACCAACCTTCAAATTCACAGGGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548896.1
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp CCTTCTCTTCTAACATTCTCTCATCAGGGAACAGCCTaGACTTCTGGTCTGGTGCACCACACGGGGAACAGC +
Preference number: 6 (lower is better)
Translates to: PSLLTFSHQGTA*TSGLVHHTGNS
Trigger: GCTGTTCCCCGTGTGGTGCACCAGACCAGAAGTGCAGGCTGTTCCCTGATGAGAGAATGTTAGAAGAGAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp CTGAGACATCCTCCGAAGACTCCTGAGCGCGAACTGTaGAAGCAAAGCCCCACATGGCTTTATCAGGAGTGT +
Preference number: 6 (lower is better)
Translates to: LRHPPKTPEREL*KQSPTWLYQEC
Trigger: ACACTCCTGATAAAGCCATGTGGGGCTTTGCTTGCACAGTTCGCGCTCAGGAGTCTTCGGAGGATGTCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp CATTCAGGCGGTATTCCAGCAGCCGGGCATAGGCATTaGTCTGATTCCCACAAACAGAGCGCAAACGTTCTG +
Preference number: 6 (lower is better)
Translates to: HSGGIPAAGHRH*SDSHKQSANVL
Trigger: CAGAACGTTTGCGCTCTGTTTGTGGGAATCAGAGCAATGCCTATGCCCGGCTGCTGGAATACCGCCTGAATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550724.2
ENST00000682272.1
CDS GCA 72 bp ATCCCCCTGGAGGAGGCACCAGCATCACCAAGTAGGTaGCACAGGTATATATGGGTGTCTTCCGCAGCATTT +
Preference number: 6 (lower is better)
Translates to: IPLEEAPASPSR*HRYIWVSSAAF
Trigger: AAATGCTGCGGAAGACACCCATATATACCTGTGGCACCTACTTGGTGATGCTGGTGCCTCCTCCAGGGGGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp AAGGCGATCACTTCTGCAGCCATGCTGTTTGCCACATaGCCACTGATGAAGGGACGCACAGGATCAGTCCTT +
Preference number: 6 (lower is better)
Translates to: KAITSAAMLFAT*PLMKGRTGSVL
Trigger: AAGGACTGATCCTGTGCGTCCCTTCATCAGTGGGCATGTGGCAAACAGCATGGCTGCAGAAGTGATCGCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp GATGTCATCATCGTCATCATCATCGCTTTCATCATCTaGAATGGGAGGCGGGTGAGGGTCTGGGCCAGAGGT +
Preference number: 6 (lower is better)
Translates to: DVIIVIIIAFII*NGRRVRVWARG
Trigger: ACCTCTGGCCCAGACCCTCACCCGCCTCCCATTGCAGATGATGAAAGCGATGATGATGACGATGATGACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp ACCAGCACACCTTCACTGCGGAGGTACGTTTCTACCTaGACCAGTTCATTCACCGTGTCATCCAAGCTGGAG +
Preference number: 6 (lower is better)
Translates to: TSTPSLRRYVST*TSSFTVSSKLE
Trigger: CTCCAGCTTGGATGACACGGTGAATGAACTGGTGCAGGTAGAAACGTACCTCCGCAGTGAAGGTGTGCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548896.1
CDS CCA 72 bp ACTCCTGAGCGCGAACTGTGCAAGCAAAGCCCCACATaGCTTTATCAGGAGTGTTGTGTTCACGGCCACTTC +
Preference number: 6 (lower is better)
Translates to: TPERELCKQSPT*LYQECCVHGHF
Trigger: GAAGTGGCCGTGAACACAACACTCCTGATAAAGCCATGTGGGGCTTTGCTTGCACAGTTCGCGCTCAGGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp AGACAGTCAGCAGGCTCCTTGGTCAAGCTCAAAGGCTaGCAGTCACGAAGGCAGTTCAATAGCACCTCAGCA +
Preference number: 6 (lower is better)
Translates to: RQSAGSLVKLKG*QSRRQFNSTSA
Trigger: TGCTGAGGTGCTATTGAACTGCCTTCGTGACTGCCAGCCTTTGAGCTTGACCAAGGAGCCTGCTGACTGTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp CTCCTTGAGAGATCATTGAGAAGACTAAGGACATCCTaGAGCGCGTCATTCCCAGCAGCCTGGTTGCCACAG +
Preference number: 6 (lower is better)
Translates to: LLERSLRRLRTS*SASFPAAWLPQ
Trigger: CTGTGGCAACCAGGCTGCTGGGAATGACGCGCTCCAGGATGTCCTTAGTCTTCTCAATGATCTCTCAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp ATGGTGGCCCATGAGTGCCTGGGTCTGATGCAATACTaGTGCCAGCATCATTGTCACTGTCAGATGCCATGG +
Preference number: 6 (lower is better)
Translates to: MVAHECLGLMQY*CQHHCHCQMPW
Trigger: CCATGGCATCTGACAGTGACAATGATGCTGGCACCAGTATTGCATCAGACCCAGGCACTCATGGGCCACCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp TCACTGTCTGGGAGTTGCCCTGGTAAAAGAGGTCCGTaGCGGAGCAGTTCTGGGAATGGATGCAATGCTGTA +
Preference number: 6 (lower is better)
Translates to: SLSGSCPGKRGP*RSSSGNGCNAV
Trigger: TACAGCATTGCATCCATTCCCAGAACTGCTCCGCCACGGACCTCTTTTACCAGGGCAACTCCCAGACAGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp AAAAGGAAACTGCTGCTGGACACAGCTTGGTCAGGGTaGGTGCCGATGAAAGCAAACAGCTGCCCTAGCAGG +
Preference number: 6 (lower is better)
Translates to: KRKLLLDTAWSG*VPMKANSCPSR
Trigger: CCTGCTAGGGCAGCTGTTTGCTTTCATCGGCACCAACCCTGACCAAGCTGTGTCCAGCAGCAGTTTCCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp TCCTTCCCGGCCTTGCTGTACTTGCTCTTGTCAAACTaGGGCTTTGGCACGCCATACTTCCTCAGGATCTGG +
Preference number: 6 (lower is better)
Translates to: SFPALLYLLLSN*GFGTPYFLRIW
Trigger: CCAGATCCTGAGGAAGTATGGCGTGCCAAAGCCCAAGTTTGACAAGAGCAAGTACAGCAAGGCCGGGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 90 bp GATGTGAAGGGCGCTTGCTCAGGTTGCTGCAACAAGCCCTGGCGTTaGAGCAGGGCCAAAGTTTCCTCATCACCTGAACTTTCCCTTTCA +
Preference number: 6 (lower is better)
Translates to: DVKGACSGCCNKPWR*SRAKVSSSPELSLS
Trigger: TGAAAGGGAAAGTTCAGGTGATGAGGAAACTTTGGCCCTGCTCAAACGCCAGGGCTTGTTGCAGCAACCTGAGCAAGCGCCCTTCACATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp TCTACCTGGATGGTCATTACTCCCCGACGTACTCCAGGCTGTACCTaGAGTGCAACTACTACAGCAGATGGCGGCCTCATTTCCAAGAGG +
Preference number: 6 (lower is better)
Translates to: STWMVITPRRTPGCT*SATTTADGGLISKR
Trigger: CCTCTTGGAAATGAGGCCGCCATCTGCTGTAGTAGTTGCACTCAAGGTACAGCCTGGAGTACGTCGGGGAGTAATGACCATCCAGGTAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS TCA 72 bp CCAGCTGCACTAGCTGAGGCATCAGGGCATCCGCCATaGTCAGAGTCTGTAAATTTGGATGCATCAAGGAGG +
Preference number: 6 (lower is better)
Translates to: PAALAEASGHPP*SESVNLDASRR
Trigger: CCTCCTTGATGCATCCAAATTTACAGACTCTGATCATGGCGGATGCCCTGATGCCTCAGCTAGTGCAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000547352.1
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp GATGGGCTTCGCTGGTGTCAGGCTCAGCGTCTGCTCTaGATGGGCACAACTCTTAAATATCTCCGTCAGAAC +
Preference number: 6 (lower is better)
Translates to: DGLRWCQAQRLL*MGTTLKYLRQN
Trigger: GTTCTGACGGAGATATTTAAGAGTTGTGCCCATTCAGAGCAGACGCTGAGCCTGACACCAGCGAAGCCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS TCA 72 bp TTTGAGACTGGAGAGCCTACCATCTACTGCCAGCCCTaGTCTGAGTCCCTGAGGAAAGCTCAGGCAAGTCAA +
Preference number: 6 (lower is better)
Translates to: FETGEPTIYCQP*SESLRKAQASQ
Trigger: TTGACTTGCCTGAGCTTTCCTCAGGGACTCAGATCAGGGCTGGCAGTAGATGGTAGGCTCTCCAGTCTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550968.5
CDS TCA 72 bp TGGTCATTACTCCCCGACGTACTCCAGGCTGTACCTTaGGTGCAACTACTACAGCAGATGGCGGCCTCATTT +
Preference number: 6 (lower is better)
Translates to: WSLLPDVLQAVP*VQLLQQMAASF
Trigger: AAATGAGGCCGCCATCTGCTGTAGTAGTTGCACTCAAGGTACAGCCTGGAGTACGTCGGGGAGTAATGACCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS GCA 72 bp GTTTATTATCGAAAGAGACAGGCCGGTGGAGAAGACTaGCGCTGCCAAAAGCCACCCATCCTGGTTCCAACT +
Preference number: 6 (lower is better)
Translates to: VYYRKRQAGGED*RCQKPPILVPT
Trigger: AGTTGGAACCAGGATGGGTGGCTTTTGGCAGCGGCAGTCTTCTCCACCGGCCTGTCTCTTTCGATAATAAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp ACAGAGGTCATGGTCTCGCCAAAGGCTTCCTGGACCTaGTCGACCATCCCACCACATGTGAGTTCTTCAATT +
Preference number: 6 (lower is better)
Translates to: TEVMVSPKASWT*STIPPHVSSSI
Trigger: AATTGAAGAACTCACATGTGGTGGGATGGTCGAGCAGGTCCAGGAAGCCTTTGGCGAGACCATGACCTCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp GGATCCTATCTTGATTGTCTCTTTGAAGCCTCCAAGTaGACACAGTGCGGCAACGGCCTGGCGTGCAATTCT +
Preference number: 6 (lower is better)
Translates to: GSYLDCLFEASK*TQCGNGLACNS
Trigger: AGAATTGCACGCCAGGCCGTTGCCGCACTGTGTGCACTTGGAGGCTTCAAAGAGACAATCAAGATAGGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp TGCAATACTGGTGCCAGCATCATTGTCACTGTCAGATaGCATGGCGAAAGGCAGGGCCTCAAAGTTAGCGCT +
Preference number: 6 (lower is better)
Translates to: CNTGASIIVTVR*HGERQGLKVSA
Trigger: AGCGCTAACTTTGAGGCCCTGCCTTTCGCCATGGCATCTGACAGTGACAATGATGCTGGCACCAGTATTGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp ACTCTGATGGGCTTCGCTGGTGTCAGGCTCAGCGTCTaGTCTGAATGGGCACAACTCTTAAATATCTCCGTC +
Preference number: 6 (lower is better)
Translates to: TLMGFAGVRLSV*SEWAQLLNISV
Trigger: GACGGAGATATTTAAGAGTTGTGCCCATTCAGAGCAGACGCTGAGCCTGACACCAGCGAAGCCCATCAGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp GAGCATCCTCAGCCGTTCACACTGTACCTCCACAACTaGAAGTCGCTCTCCTGTAGAGGGCACATGTTGAAT +
Preference number: 6 (lower is better)
Translates to: EHPQPFTLYLHN*KSLSCRGHMLN
Trigger: ATTCAACATGTGCCCTCTACAGGAGAGCGACTTGCAGTTGTGGAGGTACAGTGTGAACGGCTGAGGATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000552437.1
CDS GCA 72 bp CATTACTCCCCGACGTACTCCAGGCTGTACCTTGAGTaGAACTACTACAGCAGATGGCGGCCTCATTTCCAA +
Preference number: 6 (lower is better)
Translates to: HYSPTYSRLYLE*NYYSRWRPHFQ
Trigger: TTGGAAATGAGGCCGCCATCTGCTGTAGTAGTTGCACTCAAGGTACAGCCTGGAGTACGTCGGGGAGTAATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS CCA 72 bp TCATGTCTCGATCCATCTTCACAACTTTCTCCATGTTaGCGCCAGTACCAAGTCGGAAGGGCCGTCCTTCTG +
Preference number: 6 (lower is better)
Translates to: SCLDPSSQLSPC*RQYQVGRAVLL
Trigger: CAGAAGGACGGCCCTTCCGACTTGGTACTGGCGCCAACATGGAGAAAGTTGTGAAGATGGATCGAGACATGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp ATATCCACCATACCTAGTTGTAAGGCCCCCTTTATCTaGTCCAGGCCCGATTTCCGCTCTGCTTCATTGCGG +
Preference number: 6 (lower is better)
Translates to: ISTIPSCKAPFI*SRPDFRSASLR
Trigger: CCGCAATGAAGCAGAGCGGAAATCGGGCCTGGACCAGATAAAGGGGGCCTTACAACTAGGTATGGTGGATAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp AATGCCTTGTCATCCCTGTTTCTACCGAGAAGCCACTaGCATCCGGGACTCTGGCTCTGCTATTGTCTTGCA +
Preference number: 6 (lower is better)
Translates to: NALSSLFLPRSH*HPGLWLCYCLA
Trigger: TGCAAGACAATAGCAGAGCCAGAGTCCCGGATGCCAGTGGCTTCTCGGTAGAAACAGGGATGACAAGGCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS CCA 72 bp TCCAGGCTGTACCTTGAGTGCAACTACTACAGCAGATaGCGGCCTCATTTCCAAGAGGTCAAGGGGATGGTA +
Preference number: 6 (lower is better)
Translates to: SRLYLECNYYSR*RPHFQEVKGMV
Trigger: TACCATCCCCTTGACCTCTTGGAAATGAGGCCGCCATCTGCTGTAGTAGTTGCACTCAAGGTACAGCCTGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS CAA 72 bp CTGCCAAATCGGTTGTTTTGGAGCTGTTCAGCCAGGTaGGTTAGGATCACATCCCGTAGCTGGGAGAGTCCA +
Preference number: 6 (lower is better)
Translates to: LPNRLFWSCSAR*VRITSRSWESP
Trigger: TGGACTCTCCCAGCTACGGGATGTGATCCTAACCAACCTGGCTGAACAGCTCCAAAACAACCGATTTGGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp CTGTCTGACATCCTGGAACCACATAATCTGCCAGCTTaGCTAAGAGCAGGGAGGCGATCTTGGAAGCTGGGT +
Preference number: 6 (lower is better)
Translates to: LSDILEPHNLPA*LRAGRRSWKLG
Trigger: ACCCAGCTTCCAAGATCGCCTCCCTGCTCTTAGCAAAGCTGGCAGATTATGTGGTTCCAGGATGTCAGACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp GTCATGTCTCGATCCATCTTCACAACTTTCTCCATGTaGGCGCCAGTACCAAGTCGGAAGGGCCGTCCTTCT +
Preference number: 6 (lower is better)
Translates to: VMSRSIFTTFSM*APVPSRKGRPS
Trigger: AGAAGGACGGCCCTTCCGACTTGGTACTGGCGCCAACATGGAGAAAGTTGTGAAGATGGATCGAGACATGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp TTGTCGCCTGTGGATAGTCCACTCACAGTCTCTGGGTaGATAGACTCTACAGGTGGCCCAATGCTGACGATG +
Preference number: 6 (lower is better)
Translates to: LSPVDSPLTVSG*IDSTGGPMLTM
Trigger: CATCGTCAGCATTGGGCCACCTGTAGAGTCTATCAACCCAGAGACTGTGAGTGGACTATCCACAGGCGACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp ATGGTCATTACTCCCCGACGTACTCCAGGCTGTACCTaGAGTGCAACTACTACAGCAGATGGCGGCCTCATT +
Preference number: 6 (lower is better)
Translates to: MVITPRRTPGCT*SATTTADGGLI
Trigger: AATGAGGCCGCCATCTGCTGTAGTAGTTGCACTCAAGGTACAGCCTGGAGTACGTCGGGGAGTAATGACCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS CAA 90 bp CTTTCAGTGTGTTGGAGATGGTGGAACCAGTCAGGGCAGCAAGCGTaGCTGACGGGGAGGCTCTATACCGAGAAAGTCTACTTAGAAGCA +
Preference number: 6 (lower is better)
Translates to: LSVCWRWWNQSGQQA*LTGRLYTEKVYLEA
Trigger: TGCTTCTAAGTAGACTTTCTCGGTATAGAGCCTCCCCGTCAGCAACGCTTGCTGCCCTGACTGGTTCCACCATCTCCAACACACTGAAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp GAGAAAGAACTGTCTGACATCCTGGAACCACATAATCTGCCAGCTTaGCTAAGAGCAGGGAGGCGATCTTGGAAGCTGGGTCGCTGGGAT +
Preference number: 6 (lower is better)
Translates to: EKELSDILEPHNLPA*LRAGRRSWKLGRWD
Trigger: ATCCCAGCGACCCAGCTTCCAAGATCGCCTCCCTGCTCTTAGCAAAGCTGGCAGATTATGTGGTTCCAGGATGTCAGACAGTTCTTTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp CCACCCTTGGTCATGTCTCGATCCATCTTCACAACTTTCTCCATGTaGGCGCCAGTACCAAGTCGGAAGGGCCGTCCTTCTGAACTACTT +
Preference number: 6 (lower is better)
Translates to: PPLVMSRSIFTTFSM*APVPSRKGRPSELL
Trigger: AAGTAGTTCAGAAGGACGGCCCTTCCGACTTGGTACTGGCGCCAACATGGAGAAAGTTGTGAAGATGGATCGAGACATGACCAAGGGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp TCCTCATCACTGCCAAATCGGTTGTTTTGGAGCTGTTCAGCCAGGTaGGTTAGGATCACATCCCGTAGCTGGGAGAGTCCACTGTTTCTC +
Preference number: 6 (lower is better)
Translates to: SSSLPNRLFWSCSAR*VRITSRSWESPLFL
Trigger: GAGAAACAGTGGACTCTCCCAGCTACGGGATGTGATCCTAACCAACCTGGCTGAACAGCTCCAAAACAACCGATTTGGCAGTGATGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp CTTAGCAATGGCTGGAGGACTTCATGGGATGACTGGTCTTCCCGCTaGTGGATAAATATCGAGAGCTTGCCATCCACAGCCTCACTCTCT +
Preference number: 6 (lower is better)
Translates to: LSNGWRTSWDDWSSR*WINIESLPSTASLS
Trigger: AGAGAGTGAGGCTGTGGATGGCAAGCTCTCGATATTTATCCACAAGCGGGAAGACCAGTCATCCCATGAAGTCCTCCAGCCATTGCTAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp GTTTTCTTTTTGTCGCCTGTGGATAGTCCACTCACAGTCTCTGGGTaGATAGACTCTACAGGTGGCCCAATGCTGACGATGAGGCCTGAC +
Preference number: 6 (lower is better)
Translates to: VFFLSPVDSPLTVSG*IDSTGGPMLTMRPD
Trigger: GTCAGGCCTCATCGTCAGCATTGGGCCACCTGTAGAGTCTATCAACCCAGAGACTGTGAGTGGACTATCCACAGGCGACAAAAAGAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp TTCTTGGTCTGTTTCTCACTGGAGCTGGACTCGGTCTaGTTGCTCAAGCTACACAGTCGATCCATGAGCTGC +
Preference number: 6 (lower is better)
Translates to: FLVCFSLELDSV*LLKLHSRSMSC
Trigger: GCAGCTCATGGATCGACTGTGTAGCTTGAGCAATCAGACCGAGTCCAGCTCCAGTGAGAAACAGACCAAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp CTGACAGAAATACGCAGTATTTCAGAGGGATCACACTaGGTCCCTAGGAGAAAAGGCTCCCATCCCAGCCAG +
Preference number: 6 (lower is better)
Translates to: LTEIRSISEGSH*VPRRKGSHPSQ
Trigger: CTGGCTGGGATGGGAGCCTTTTCTCCTAGGGACTCAGTGTGATCCCTCTGAAATACTGCGTATTTCTGTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547352.1
CDS GCA 72 bp CTTGATTGTCTCTTTGAAGCCTCCAAGTGCACACAGTaGGGCAACGGCCTGGCGTGCAATTCTCTGAAGTTT +
Preference number: 6 (lower is better)
Translates to: LDCLFEASKCTQ*GNGLACNSLKF
Trigger: AAACTTCAGAGAATTGCACGCCAGGCCGTTGCCGCACTGTGTGCACTTGGAGGCTTCAAAGAGACAATCAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp TTGGATTCGGAAATTGGGAACTCTTCGGAGGGGAACTaGTCTGGTGCTGTCTGCAGGAAAGAGCAGATCTGT +
Preference number: 6 (lower is better)
Translates to: LDSEIGNSSEGN*SGAVCRKEQIC
Trigger: ACAGATCTGCTCTTTCCTGCAGACAGCACCAGAGCAGTTCCCCTCCGAAGAGTTCCCAATTTCCGAATCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp CAGAGCGCAAACGTTCTGCTAATTCCGACGGGTTCTTaGTCTCAAAGGTTAAAATCTCCAGGTCGGTGTCCG +
Preference number: 6 (lower is better)
Translates to: QSANVLLIPTGS*SQRLKSPGRCP
Trigger: CGGACACCGACCTGGAGATTTTAACCTTTGAGACCAAGAACCCGTCGGAATTAGCAGAACGTTTGCGCTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550724.2
ENST00000682272.1
CDS CCA 72 bp TATTTGCTGCTTGATCCTCTTTCAGTGTGTTGGAGATaGTGGAACCAGTCAGGGCAGCAAGCGTTGCTGACG +
Preference number: 6 (lower is better)
Translates to: YLLLDPLSVCWR*WNQSGQQALLT
Trigger: CGTCAGCAACGCTTGCTGCCCTGACTGGTTCCACCATCTCCAACACACTGAAAGAGGATCAAGCAGCAAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp CTCCATGAAGCCCAAAGGTTTTCAGCATCCCTCGGATaGCAAATTTTGGCAGAGCAGTTCCAACAGCACTGC +
Preference number: 6 (lower is better)
Translates to: LHEAQRFSASLG*QILAEQFQQHC
Trigger: GCAGTGCTGTTGGAACTGCTCTGCCAAAATTTGCCATCCGAGGGATGCTGAAAACCTTTGGGCTTCATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp GAACATGTCGGACAGAAAATAATGGTAGAGGTGGTGTaGTCTGAAGGCGGCCACAGCTTTGAGACTGGAGAG +
Preference number: 6 (lower is better)
Translates to: EHVGQKIMVEVV*SEGGHSFETGE
Trigger: CTCTCCAGTCTCAAAGCTGTGGCCGCCTTCAGACCACACCACCTCTACCATTATTTTCTGTCCGACATGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550968.5
CDS CAA 72 bp GCCCAAAGGTTTTCAGCATCCCTCGGATGGCAAATTTaGGCAGAGCAGTTCCAACAGCACTGCTGGCTACAT +
Preference number: 6 (lower is better)
Translates to: AQRFSASLGWQI*AEQFQQHCWLH
Trigger: ATGTAGCCAGCAGTGCTGTTGGAACTGCTCTGCCAAAATTTGCCATCCGAGGGATGCTGAAAACCTTTGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp CCACTGTGGGTGTTCTTCCACCCTTTAGACAATGCCTaGTCATCCCTGTTTCTACCGAGAAGCCACTGGCAT +
Preference number: 6 (lower is better)
Translates to: PLWVFFHPLDNA*SSLFLPRSHWH
Trigger: ATGCCAGTGGCTTCTCGGTAGAAACAGGGATGACAAGGCATTGTCTAAAGGGTGGAAGAACACCCACAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548140.1
CDS CAA 90 bp GCGCGAACTGTGCAAGCAAAGCCCCACATGGCTTTATCAGGAGTGTaGTGTTCACGGCCACTTCTCATTTCAAAGGAGAAGGTGACTGTA +
Preference number: 6 (lower is better)
Translates to: ARTVQAKPHMALSGV*CSRPLLISKEKVTV
Trigger: TACAGTCACCTTCTCCTTTGAAATGAGAAGTGGCCGTGAACACAACACTCCTGATAAAGCCATGTGGGGCTTTGCTTGCACAGTTCGCGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp TCAGAAGTCTCCTCTAGCCAAGAGCACAGCAAAGTTTCAATTCCATaGAGACAGTCAGCAGGCTCCTTGGTCAAGCTCAAAGGCTGGCAG +
Preference number: 6 (lower is better)
Translates to: SEVSSSQEHSKVSIP*RQSAGSLVKLKGWQ
Trigger: CTGCCAGCCTTTGAGCTTGACCAAGGAGCCTGCTGACTGTCTCAATGGAATTGAAACTTTGCTGTGCTCTTGGCTAGAGGAGACTTCTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp ACAACTGCAAGTCGCTCTCCTGTAGAGGGCACATGTTaGATCTGTGAAAACAACTCCCGCAACTCCCAAGTG +
Preference number: 6 (lower is better)
Translates to: TTASRSPVEGTC*ICENNSRNSQV
Trigger: CACTTGGGAGTTGCGGGAGTTGTTTTCACAGATTCAACATGTGCCCTCTACAGGAGAGCGACTTGCAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552437.1
CDS TCA 72 bp TGTCCCCTCAGCCAGGAGCATCCCTCTATTCTTTCATaGCAACCTCAGATCTACCTGGATGGTCATTACTCC +
Preference number: 6 (lower is better)
Translates to: CPLSQEHPSILS*QPQIYLDGHYS
Trigger: GGAGTAATGACCATCCAGGTAGATCTGAGGTTGTCATGAAAGAATAGAGGGATGCTCCTGGCTGAGGGGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS TCA 72 bp CTGCAAGTGTCAACAGGAAAAAGTGTCAGTGCCCAGTaGTGGTTAAGACTGCAGGGAAGTGGCTTTCAGGGT +
Preference number: 6 (lower is better)
Translates to: LQVSTGKSVSAQ*WLRLQGSGFQG
Trigger: ACCCTGAAAGCCACTTCCCTGCAGTCTTAACCATCACTGGGCACTGACACTTTTTCCTGTTGACACTTGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS CCA 72 bp TGTTCAGCCAGGTTGGTTAGGATCACATCCCGTAGCTaGGAGAGTCCACTGTTTCTCTCTCCTTCTGTTAAG +
Preference number: 6 (lower is better)
Translates to: CSARLVRITSRS*ESPLFLSPSVK
Trigger: CTTAACAGAAGGAGAGAGAAACAGTGGACTCTCCCAGCTACGGGATGTGATCCTAACCAACCTGGCTGAACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp TCCACAACTGCAAGTCGCTCTCCAGCACTACATTCCTaGGCTACTAGGTTAAGAACTTCAACAGCTGCTGGA +
Preference number: 6 (lower is better)
Translates to: STTASRSPALHS*ATRLRTSTAAG
Trigger: TCCAGCAGCTGTTGAAGTTCTTAACCTAGTAGCCCAGGAATGTAGTGCTGGAGAGCGACTTGCAGTTGTGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000682272.1
CDS CCA 72 bp TCACGTCTAAGCGAACGCTCTTCCACTGTAACAAACTaGAGCCATTATAGTGCACGGCTCGGCCGTTGTTAT +
Preference number: 6 (lower is better)
Translates to: SRLSERSSTVTN*SHYSARLGRCY
Trigger: ATAACAACGGCCGAGCCGTGCACTATAATGGCTCCAGTTTGTTACAGTGGAAGAGCGTTCGCTTAGACGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp CCCAAAGGTTTTCAGCATCCCTCGGATGGCAAATTTTaGCAGAGCAGTTCCAACAGCACTGCTGGCTACATT +
Preference number: 6 (lower is better)
Translates to: PKGFQHPSDGKF*QSSSNSTAGYI
Trigger: AATGTAGCCAGCAGTGCTGTTGGAACTGCTCTGCCAAAATTTGCCATCCGAGGGATGCTGAAAACCTTTGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp ACAGAGCGCAAACGTTCTGCTAATTCCGACGGGTTCTaGGTCTCAAAGGTTAAAATCTCCAGGTCGGTGTCC +
Preference number: 6 (lower is better)
Translates to: TERKRSANSDGF*VSKVKISRSVS
Trigger: GGACACCGACCTGGAGATTTTAACCTTTGAGACCAAGAACCCGTCGGAATTAGCAGAACGTTTGCGCTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550724.2
ENST00000682272.1
CDS CAA 72 bp TGGCCAGCCCAGAAACTGTCCAGGTGGAAGACTGCCTaGGGTGGTATGAGGATAGCTAAAGAGAAAAACAGA +
Preference number: 6 (lower is better)
Translates to: WPAQKLSRWKTA*GGMRIAKEKNR
Trigger: TCTGTTTTTCTCTTTAGCTATCCTCATACCACCCAAGGCAGTCTTCCACCTGGACAGTTTCTGGGCTGGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547352.1
CDS CAA 90 bp ATTGGATGCTGCTTGCCCAAGACACTTGTGATTGGAAGATTGGGGTaGGTGGCAAGAAGATTGAGTTGGTGTATGCACATCGCACCAACG +
Preference number: 6 (lower is better)
Translates to: IGCCLPKTLVIGRLG*VARRLSWCMHIAPT
Trigger: CGTTGGTGCGATGTGCATACACCAACTCAATCTTCTTGCCACCAACCCCAATCTTCCAATCACAAGTGTCTTGGGCAAGCAGCATCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp TCATGGGATGACTGGTCTTCCCGCTTGTGGATAAATATCGAGAGCTaGCCATCCACAGCCTCACTCTCTTCTCCAGGATCTTTATCTCCT +
Preference number: 6 (lower is better)
Translates to: SWDDWSSRLWINIES*PSTASLSSPGSLSP
Trigger: AGGAGATAAAGATCCTGGAGAAGAGAGTGAGGCTGTGGATGGCAAGCTCTCGATATTTATCCACAAGCGGGAAGACCAGTCATCCCATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp TCCGAGTTCCTCTCTCGGCAAATGGAAGTTTGGGCAGTTTTCTTTTaGTCGCCTGTGGATAGTCCACTCACAGTCTCTGGGTTGATAGAC +
Preference number: 6 (lower is better)
Translates to: SEFLSRQMEVWAVFF*SPVDSPLTVSGLID
Trigger: GTCTATCAACCCAGAGACTGTGAGTGGACTATCCACAGGCGACAAAAAGAAAACTGCCCAAACTTCCATTTGCCGAGAGAGGAACTCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp CTCCATGAAGCCCAAAGGTTTTCAGCATCCCTCGGATGGCAAATTTaGGCAGAGCAGTTCCAACAGCACTGCTGGCTACATTATTGCTGT +
Preference number: 6 (lower is better)
Translates to: LHEAQRFSASLGWQI*AEQFQQHCWLHYCC
Trigger: ACAGCAATAATGTAGCCAGCAGTGCTGTTGGAACTGCTCTGCCAAAATTTGCCATCCGAGGGATGCTGAAAACCTTTGGGCTTCATGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 90 bp ATCGTAACCACAGGACAAGATCGCCCTCCAGACGCTACGGATATCTaGCCTGGCTCGGTCAATAACAAATTTGTGAAATCCTTCCAGCGT +
Preference number: 6 (lower is better)
Translates to: IVTTGQDRPPDATDI*PGSVNNKFVKSFQR
Trigger: ACGCTGGAAGGATTTCACAAATTTGTTATTGACCGAGCCAGGCAAGATATCCGTAGCGTCTGGAGGGCGATCTTGTCCTGTGGTTACGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000548588.2
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 90 bp AGCTCCTGGTGGCCAGCCCAGAAACTGTCCAGGTGGAAGACTGCCTaGGGTGGTATGAGGATAGCTAAAGAGAAAAACAGAACAGTAAAA +
Preference number: 6 (lower is better)
Translates to: SSWWPAQKLSRWKTA*GGMRIAKEKNRTVK
Trigger: TTTTACTGTTCTGTTTTTCTCTTTAGCTATCCTCATACCACCCAAGGCAGTCTTCCACCTGGACAGTTTCTGGGCTGGCCACCAGGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547352.1
CDS TCA 72 bp GCAAGTAGCAATTTGGGAGGCCAAGGTCTGGAGAGCTaGCAGAAATACGCAGTATTTCAGAGGGATCACACT +
Preference number: 6 (lower is better)
Translates to: ASSNLGGQGLES*QKYAVFQRDHT
Trigger: AGTGTGATCCCTCTGAAATACTGCGTATTTCTGTCAGCTCTCCAGACCTTGGCCTCCCAAATTGCTACTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547352.1
CDS GCA 72 bp GAGACTTCCCTCCTGAGGAAGCAACATGGACTGGACTaGCTGTACTACCTTCTCAGTAATGGACAGTTTATG +
Preference number: 6 (lower is better)
Translates to: ETSLLRKQHGLD*LYYLLSNGQFM
Trigger: CATAAACTGTCCATTACTGAGAAGGTAGTACAGGCAGTCCAGTCCATGTTGCTTCCTCAGGAGGGAAGTCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp TGGTGTTCTTTTTCTGAATGTGAACCACTGGCCACATaGCACCAGAGACGTCTTCAAGATATGGTGAGAGGC +
Preference number: 6 (lower is better)
Translates to: WCSFSECEPLAT*HQRRLQDMVRG
Trigger: GCCTCTCACCATATCTTGAAGACGTCTCTGGTGGCATGTGGCCAGTGGTTCACATTCAGAAAAAGAACACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS GCA 72 bp ATCAGTCCTGCAAGTGTCAACAGGAAAAAGTGTCAGTaGCCAGTGATGGTTAAGACTGCAGGGAAGTGGCTT +
Preference number: 6 (lower is better)
Translates to: ISPASVNRKKCQ*PVMVKTAGKWL
Trigger: AAGCCACTTCCCTGCAGTCTTAACCATCACTGGGCACTGACACTTTTTCCTGTTGACACTTGCAGGACTGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS CCA 72 bp GGCAGGGACCCTAGATCCGTCTGTTTCTGTAATAGATaGACTGTGTGGACGAAAGTTTTCAATGATCCCCTG +
Preference number: 6 (lower is better)
Translates to: GRDPRSVCFCNR*TVWTKVFNDPL
Trigger: CAGGGGATCATTGAAAACTTTCGTCCACACAGTCCATCTATTACAGAAACAGACGGATCTAGGGTCCCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp CTACTTAGCAATGGCTGGAGGACTTCATGGGATGACTaGTCTTCCCGCTTGTGGATAAATATCGAGAGCTTG +
Preference number: 6 (lower is better)
Translates to: LLSNGWRTSWDD*SSRLWINIESL
Trigger: CAAGCTCTCGATATTTATCCACAAGCGGGAAGACCAGTCATCCCATGAAGTCCTCCAGCCATTGCTAAGTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp AGTTCCAACAGCACTGCTGGCTACATTATTGCTGTCTaGAGAGCGGGTTACTACTGTGAGACCTTTTCGAAC +
Preference number: 6 (lower is better)
Translates to: SSNSTAGYIIAV*RAGYYCETFSN
Trigger: GTTCGAAAAGGTCTCACAGTAGTAACCCGCTCTCCAGACAGCAATAATGTAGCCAGCAGTGCTGTTGGAACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp GAAATTCACGTCCATGTTGACTTTGGATTCGGAAATTaGGAACTCTTCGGAGGGGAACTGCTCTGGTGCTGT +
Preference number: 6 (lower is better)
Translates to: EIHVHVDFGFGN*ELFGGELLWCC
Trigger: ACAGCACCAGAGCAGTTCCCCTCCGAAGAGTTCCCAATTTCCGAATCCAAAGTCAACATGGACGTGAATTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp CTCTATTCTTTCATGACAACCTCAGATCTACCTGGATaGTCATTACTCCCCGACGTACTCCAGGCTGTACCT +
Preference number: 6 (lower is better)
Translates to: LYSFMTTSDLPG*SLLPDVLQAVP
Trigger: AGGTACAGCCTGGAGTACGTCGGGGAGTAATGACCATCCAGGTAGATCTGAGGTTGTCATGAAAGAATAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS CCA 72 bp ATCCCTCTATTCTTTCATGACAACCTCAGATCTACCTaGATGGTCATTACTCCCCGACGTACTCCAGGCTGT +
Preference number: 6 (lower is better)
Translates to: IPLFFHDNLRST*MVITPRRTPGC
Trigger: ACAGCCTGGAGTACGTCGGGGAGTAATGACCATCCAGGTAGATCTGAGGTTGTCATGAAAGAATAGAGGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS CCA 72 bp TGTCAGTGCCCAGTGATGGTTAAGACTGCAGGGAAGTaGCTTTCAGGGTTAGCATCAGAGGAAAACCTTTTC +
Preference number: 6 (lower is better)
Translates to: CQCPVMVKTAGK*LSGLASEENLF
Trigger: GAAAAGGTTTTCCTCTGATGCTAACCCTGAAAGCCACTTCCCTGCAGTCTTAACCATCACTGGGCACTGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS CAA 72 bp GGATGCTGCTTGCCCAAGACACTTGTGATTGGAAGATaGGGGTTGGTGGCAAGAAGATTGAGTTGGTGTATG +
Preference number: 6 (lower is better)
Translates to: GCCLPKTLVIGR*GLVARRLSWCM
Trigger: CATACACCAACTCAATCTTCTTGCCACCAACCCCAATCTTCCAATCACAAGTGTCTTGGGCAAGCAGCATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp GTGCAAGCAAAGCCCCACATGGCTTTATCAGGAGTGTaGTGTTCACGGCCACTTCTCATTTCAAAGGAGAAG +
Preference number: 6 (lower is better)
Translates to: VQAKPHMALSGV*CSRPLLISKEK
Trigger: CTTCTCCTTTGAAATGAGAAGTGGCCGTGAACACAACACTCCTGATAAAGCCATGTGGGGCTTTGCTTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp CCCAAGACACTTGTGATTGGAAGATTGGGGTTGGTGGCAAGAAGATaGAGTTGGTGTATGCACATCGCACCAACGTGGTGCAATAATTGG +
Preference number: 6 (lower is better)
Translates to: PKTLVIGRLGLVARR*SWCMHIAPTWCNNW
Trigger: CCAATTATTGCACCACGTTGGTGCGATGTGCATACACCAACTCAATCTTCTTGCCACCAACCCCAATCTTCCAATCACAAGTGTCTTGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp GCTTCAATTGGATGCTGCTTGCCCAAGACACTTGTGATTGGAAGATaGGGGTTGGTGGCAAGAAGATTGAGTTGGTGTATGCACATCGCA +
Preference number: 6 (lower is better)
Translates to: ASIGCCLPKTLVIGR*GLVARRLSWCMHIA
Trigger: TGCGATGTGCATACACCAACTCAATCTTCTTGCCACCAACCCCAATCTTCCAATCACAAGTGTCTTGGGCAAGCAGCATCCAATTGAAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp CTCCAGTTTCCCCTGCATGGCATCATCAACTTCACTTTGCCATTTTaGTTCCAGTTCTGCAACACTCTGCAGCTGTCTCTCCATGGCATT +
Preference number: 6 (lower is better)
Translates to: LQFPLHGIINFTLPF*FQFCNTLQLSLHGI
Trigger: AATGCCATGGAGAGACAGCTGCAGAGTGTTGCAGAACTGGAACAAAAATGGCAAAGTGAAGTTGATGATGCCATGCAGGGGAAACTGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp TCTTGGGACTGGTTTTTGTCAATGTGGTGTCAGGTTCAGAAGCGGTaGGAGAAAGAACTGTCTGACATCCTGGAACCACATAATCTGCCA +
Preference number: 6 (lower is better)
Translates to: SWDWFLSMWCQVQKR*EKELSDILEPHNLP
Trigger: TGGCAGATTATGTGGTTCCAGGATGTCAGACAGTTCTTTCTCCAACCGCTTCTGAACCTGACACCACATTGACAAAAACCAGTCCCAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp TTCCAGCAGCCCATGGGGCAGGAATCTTTAAACCAGTaGGAAATCCTGGCTCTTCCTTCTCTTCTAACATTC +
Preference number: 6 (lower is better)
Translates to: FQQPMGQESLNQ*EILALPSLLTF
Trigger: GAATGTTAGAAGAGAAGGAAGAGCCAGGATTTCTCACTGGTTTAAAGATTCCTGCCCCATGGGCTGCTGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp AAGGAGCTGACATGCTGCGAAGAAAAACAGGCTGCCTaGCAGCGTGAGATATCACTTTTGTTTCAGAAGCTG +
Preference number: 6 (lower is better)
Translates to: KELTCCEEKQAA*QREISLLFQKL
Trigger: CAGCTTCTGAAACAAAAGTGATATCTCACGCTGTCAGGCAGCCTGTTTTTCTTCGCAGCATGTCAGCTCCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp ATCTTCATTACCAATCATTTCCAGGTCAGAAGGAGCTaGCATGCTGCGAAGAAAAACAGGCTGCCTGACAGC +
Preference number: 6 (lower is better)
Translates to: IFITNHFQVRRS*HAAKKNRLPDS
Trigger: GCTGTCAGGCAGCCTGTTTTTCTTCGCAGCATGTCAGCTCCTTCTGACCTGGAAATGATTGGTAATGAAGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp TGGTCCATATTTGAGCAGCATTTGATTCAGGTGCCATaGGCAAGCTATGTAGCAAGGCGATCACTTCTGCAG +
Preference number: 6 (lower is better)
Translates to: WSIFEQHLIQVP*ASYVARRSLLQ
Trigger: CTGCAGAAGTGATCGCCTTGCTACATAGCTTGCTCATGGCACCTGAATCAAATGCTGCTCAAATATGGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp AATCAAAATAGTGTTACTGAGAAGGTGATTCTGAACTaGCATCAGATAGCGCAGGCAGGAGGATGCAGCAGG +
Preference number: 6 (lower is better)
Translates to: NQNSVTEKVILN*HQIAQAGGCSR
Trigger: CCTGCTGCATCCTCCTGCCTGCGCTATCTGATGGCAGTTCAGAATCACCTTCTCAGTAACACTATTTTGATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp CTGACTTTTAGCTCCTGTACCTTCAATGTCTCTCCCTaGAAGGAGCTGTCACTGTCATCATTCTCATCAGGT +
Preference number: 6 (lower is better)
Translates to: LTFSSCTFNVSP*KELSLSSFSSG
Trigger: ACCTGATGAGAATGATGACAGTGACAGCTCCTTGCAGGGAGAGACATTGAAGGTACAGGAGCTAAAAGTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311694.7
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp ACGCCCAGAAATTTCCCTGAGCTTTATCATGATTCCTaGAGGCAGTCTGATCCGAGGCAGATCAAAGTAGTT +
Preference number: 6 (lower is better)
Translates to: TPRNFPELYHDS*RQSDPRQIKVV
Trigger: AACTACTTTGATCTGCCTCGGATCAGACTGCCTCCAGGAATCATGATAAAGCTCAGGGAAATTTCTGGGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp AGACAGAATGTCCCTTCGGTGTTTTCTCATTCAGGCTaGCAGGAGACCAGATCCAATAGAAGTAAGTGCCAT +
Preference number: 6 (lower is better)
Translates to: RQNVPSVFSHSG*QETRSNRSKCH
Trigger: ATGGCACTTACTTCTATTGGATCTGGTCTCCTGCCAGCCTGAATGAGAAAACACCGAAGGGACATTCTGTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp CCTTCTGAACTACTTAGCAATGGCTGGAGGACTTCATaGGATGACTGGTCTTCCCGCTTGTGGATAAATATC +
Preference number: 6 (lower is better)
Translates to: PSELLSNGWRTS*DDWSSRLWINI
Trigger: GATATTTATCCACAAGCGGGAAGACCAGTCATCCCATGAAGTCCTCCAGCCATTGCTAAGTAGTTCAGAAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp AGTAAATGGCAAGTAGCAATTTGGGAGGCCAAGGTCTaGAGAGCTGACAGAAATACGCAGTATTTCAGAGGG +
Preference number: 6 (lower is better)
Translates to: SKWQVAIWEAKV*RADRNTQYFRG
Trigger: CCCTCTGAAATACTGCGTATTTCTGTCAGCTCTCCAGACCTTGGCCTCCCAAATTGCTACTTGCCATTTACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547352.1
CDS CAA 72 bp ACTGACTCCAAGTCTCTGGCAGACATAATGGAAGGCTaGATTCCCAGGGTTACACCACTGATCGATATAGTC +
Preference number: 6 (lower is better)
Translates to: TDSKSLADIMEG*IPRVTPLIDIV
Trigger: GACTATATCGATCAGTGGTGTAACCCTGGGAATCAAGCCTTCCATTATGTCTGCCAGAGACTTGGAGTCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp TGCTTGCCCAAGACACTTGTGATTGGAAGATTGGGGTaGGTGGCAAGAAGATTGAGTTGGTGTATGCACATC +
Preference number: 6 (lower is better)
Translates to: CLPKTLVIGRLG*VARRLSWCMHI
Trigger: GATGTGCATACACCAACTCAATCTTCTTGCCACCAACCCCAATCTTCCAATCACAAGTGTCTTGGGCAAGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp TCCTCTAGCCAAGAGCACAGCAAAGTTTCAATTCCATaGAGACAGTCAGCAGGCTCCTTGGTCAAGCTCAAA +
Preference number: 6 (lower is better)
Translates to: SSSQEHSKVSIP*RQSAGSLVKLK
Trigger: TTTGAGCTTGACCAAGGAGCCTGCTGACTGTCTCAATGGAATTGAAACTTTGCTGTGCTCTTGGCTAGAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp GGAAGGCTTGATTCCCAGGGTTACACCACTGATCGATATAGTCATTaGAGCATGTCCATAGCATGTTGTTCACTGTGTCATAACACGCTC +
Preference number: 6 (lower is better)
Translates to: GRLDSQGYTTDRYSH*SMSIACCSLCHNTL
Trigger: GAGCGTGTTATGACACAGTGAACAACATGCTATGGACATGCTCAAATGACTATATCGATCAGTGGTGTAACCCTGGGAATCAAGCCTTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp ACTGCTGCTGCCATTTTCCAGAATGCTTTCTGCGTATTTCCCCAATaGTGGAATGTACATCAGTGCTCTAGACAGAACCTTCTCTGCTGT +
Preference number: 6 (lower is better)
Translates to: TAAAIFQNAFCVFPQ*WNVHQCSRQNLLCC
Trigger: ACAGCAGAGAAGGTTCTGTCTAGAGCACTGATGTACATTCCACAATTGGGGAAATACGCAGAAAGCATTCTGGAAAATGGCAGCAGCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp ATCCAGTCAGGATTTGGGTGGCAAGAGCCAAAATACTaGCTTTTAGCTCCTGTACCTTCAATGTCTCTCCCT +
Preference number: 6 (lower is better)
Translates to: IQSGFGWQEPKY*LLAPVPSMSLP
Trigger: AGGGAGAGACATTGAAGGTACAGGAGCTAAAAGTCAGTATTTTGGCTCTTGCCACCCAAATCCTGACTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311694.7
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp CCAGCAGCATCTATGAGATCTGCACGACTTGTAAACTaGCCATCCGAAATATTATACACCAAGCTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: PAASMRSARLVN*PSEILYTKLEA
Trigger: AGCCTCCAGCTTGGTGTATAATATTTCGGATGGTCAGTTTACAAGTCGTGCAGATCTCATAGATGCTGCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp CTAGACAGAACCTTCTCTGCTGTTGTGGTCCATATTTaGGCAGCATTTGATTCAGGTGCCATGAGCAAGCTA +
Preference number: 6 (lower is better)
Translates to: LDRTFSAVVVHI*AAFDSGAMSKL
Trigger: TAGCTTGCTCATGGCACCTGAATCAAATGCTGCTCAAATATGGACCACAACAGCAGAGAAGGTTCTGTCTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp TTCTGCGTATTTCCCCAATTGTGGAATGTACATCAGTaGTCTAGACAGAACCTTCTCTGCTGTTGTGGTCCA +
Preference number: 6 (lower is better)
Translates to: FCVFPQLWNVHQ*SRQNLLCCCGP
Trigger: TGGACCACAACAGCAGAGAAGGTTCTGTCTAGAGCACTGATGTACATTCCACAATTGGGGAAATACGCAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp ATTGGAAGATTGGGGTTGGTGGCAAGAAGATTGAGTTaGTGTATGCACATCGCACCAACGTGGTGCAATAAT +
Preference number: 6 (lower is better)
Translates to: IGRLGLVARRLS*CMHIAPTWCNN
Trigger: ATTATTGCACCACGTTGGTGCGATGTGCATACACCAACTCAATCTTCTTGCCACCAACCCCAATCTTCCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp GAGGATCAGGGAAAGACACTGCATTGCAACTATTCCTaGCTTTCAAGCACAAAACACCTCGAACCAACTTCA +
Preference number: 6 (lower is better)
Translates to: EDQGKTLHCNYS*LSSTKHLEPTS
Trigger: TGAAGTTGGTTCGAGGTGTTTTGTGCTTGAAAGCCAGGAATAGTTGCAATGCAGTGTCTTTCCCTGATCCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS CAA 90 bp CTCCAGGATCTTTATCTCCTTTCAAGGAATTCTTGGGACTGGTTTTaGTCAATGTGGTGTCAGGTTCAGAAGCGGTTGGAGAAAGAACTG +
Preference number: 6 (lower is better)
Translates to: LQDLYLLSRNSWDWF*SMWCQVQKRLEKEL
Trigger: CAGTTCTTTCTCCAACCGCTTCTGAACCTGACACCACATTGACAAAAACCAGTCCCAAGAATTCCTTGAAAGGAGATAAAGATCCTGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp CAGTCTATGGGTGGGAATCTGACTGTAGCTATACCTTCCTGTTCATaGATAGAAGCCACTACTCCAATGCTTCCTGAAATTCCTCTACCT +
Preference number: 6 (lower is better)
Translates to: QSMGGNLTVAIPSCS*IEATTPMLPEIPLP
Trigger: AGGTAGAGGAATTTCAGGAAGCATTGGAGTAGTGGCTTCTATCAATGAACAGGAAGGTATAGCTACAGTCAGATTCCCACCCATAGACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp CTTCACAAAATAAGCTGTCTTCTAAAAGCTGGGCCATaGCCAGGCATGCTCTTGTCCTTATTTCAGCAAGGA +
Preference number: 6 (lower is better)
Translates to: LHKISCLLKAGP*PGMLLSLFQQG
Trigger: TCCTTGCTGAAATAAGGACAAGAGCATGCCTGGTCATGGCCCAGCTTTTAGAAGACAGCTTATTTTGTGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000682272.1
CDS GCA 72 bp AGTCTAGACAATGGAATAGTCAATGTGTCTGACGCTTaGGAAGTCTTTCTACAGTCTATGGGTGGGAATCTG +
Preference number: 6 (lower is better)
Translates to: SLDNGIVNVSDA*EVFLQSMGGNL
Trigger: CAGATTCCCACCCATAGACTGTAGAAAGACTTCGCAAGCGTCAGACACATTGACTATTCCATTGTCTAGACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp TGTCTTCAATGGTGGGAAGATAAAGGTCTCTTGGGATaGCACCATTCTCTTCGTAGAGAAATTCAACCGTCT +
Preference number: 6 (lower is better)
Translates to: CLQWWEDKGLLG*HHSLRREIQPS
Trigger: AGACGGTTGAATTTCTCTACGAAGAGAATGGTGGCATCCCAAGAGACCTTTATCTTCCCACCATTGAAGACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp CTTTATCTCCTTTCAAGGAATTCTTGGGACTGGTTTTaGTCAATGTGGTGTCAGGTTCAGAAGCGGTTGGAG +
Preference number: 6 (lower is better)
Translates to: LYLLSRNSWDWF*SMWCQVQKRLE
Trigger: CTCCAACCGCTTCTGAACCTGACACCACATTGACAAAAACCAGTCCCAAGAATTCCTTGAAAGGAGATAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp GTCCCTGAGGAAAGCTCAGGCAAGTCAATTGGCATTAGAGCATTTTaGCTTTGTGTCTTCGTCCCTGATTTGAAGAGAAACTCATCTGTA +
Preference number: 6 (lower is better)
Translates to: VPEESSGKSIGIRAF*LCVFVPDLKRNSSV
Trigger: TACAGATGAGTTTCTCTTCAAATCAGGGACGAAGACACAAAGCAAAAATGCTCTAATGCCAATTGACTTGCCTGAGCTTTCCTCAGGGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550968.5
CDS TCA 72 bp ATGGCCTTCTCCATAATGTCACAAATACTGCTAAGATaGTGTGCTTCAATTGGATGCTGCTTGCCCAAGACA +
Preference number: 6 (lower is better)
Translates to: MAFSIMSQILLR*CASIGCCLPKT
Trigger: TGTCTTGGGCAAGCAGCATCCAATTGAAGCACATCATCTTAGCAGTATTTGTGACATTATGGAGAAGGCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp AACACAAAGTCTAGACAATGGAATAGTCAATGTGTCTaGCGCTTGCGAAGTCTTTCTACAGTCTATGGGTGG +
Preference number: 6 (lower is better)
Translates to: NTKSRQWNSQCV*RLRSLSTVYGW
Trigger: CCACCCATAGACTGTAGAAAGACTTCGCAAGCGTCAGACACATTGACTATTCCATTGTCTAGACTTTGTGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp GTTCATCATTTAGTCTGTAATGATCATCCTCATCACTaGCAAATCGGTTGTTTTGGAGCTGTTCAGCCAGGT +
Preference number: 6 (lower is better)
Translates to: VHHLVCNDHPHH*QIGCFGAVQPG
Trigger: ACCTGGCTGAACAGCTCCAAAACAACCGATTTGGCAGTGATGAGGATGATCATTACAGACTAAATGATGAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp ACTAGAGATAAACCTAGCACTTGTCACACTTTAGCATaGATCAGTCAAATGGGAAACTTGTTAAGCTGCGCC +
Preference number: 6 (lower is better)
Translates to: TRDKPSTCHTLA*ISQMGNLLSCA
Trigger: GGCGCAGCTTAACAAGTTTCCCATTTGACTGATGCATGCTAAAGTGTGACAAGTGCTAGGTTTATCTCTAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000311694.7
CDS GCA 72 bp TTTATAAGCCATGAGGATCAGGGAAAGACACTGCATTaGAACTATTCCTGGCTTTCAAGCACAAAACACCTC +
Preference number: 6 (lower is better)
Translates to: FISHEDQGKTLH*NYSWLSSTKHL
Trigger: GAGGTGTTTTGTGCTTGAAAGCCAGGAATAGTTGCAATGCAGTGTCTTTCCCTGATCCTCATGGCTTATAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS CCA 72 bp TGGTGTATGCACATCGCACCAACGTGGTGCAATAATTaGTTTATAACCTCATTCGTGGTTATAGCCTCTTCT +
Preference number: 6 (lower is better)
Translates to: WCMHIAPTWCNN*FITSFVVIASS
Trigger: AGAAGAGGCTATAACCACGAATGAGGTTATAAACCAATTATTGCACCACGTTGGTGCGATGTGCATACACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp CTTCTCCAGGATCTTTATCTCCTTTCAAGGAATTCTTaGGACTGGTTTTTGTCAATGTGGTGTCAGGTTCAG +
Preference number: 6 (lower is better)
Translates to: LLQDLYLLSRNS*DWFLSMWCQVQ
Trigger: CTGAACCTGACACCACATTGACAAAAACCAGTCCCAAGAATTCCTTGAAAGGAGATAAAGATCCTGGAGAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp GATTCCCAGGGTTACACCACTGATCGATATAGTCATTaGAGCATGTCCATAGCATGTTGTTCACTGTGTCAT +
Preference number: 6 (lower is better)
Translates to: DSQGYTTDRYSH*SMSIACCSLCH
Trigger: ATGACACAGTGAACAACATGCTATGGACATGCTCAAATGACTATATCGATCAGTGGTGTAACCCTGGGAATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp GCCATTTTCCAGAATGCTTTCTGCGTATTTCCCCAATaGTGGAATGTACATCAGTGCTCTAGACAGAACCTT +
Preference number: 6 (lower is better)
Translates to: AIFQNAFCVFPQ*WNVHQCSRQNL
Trigger: AAGGTTCTGTCTAGAGCACTGATGTACATTCCACAATTGGGGAAATACGCAGAAAGCATTCTGGAAAATGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp GGTGGGAATCTGACTGTAGCTATACCTTCCTGTTCATaGATAGAAGCCACTACTCCAATGCTTCCTGAAATT +
Preference number: 6 (lower is better)
Translates to: GGNLTVAIPSCS*IEATTPMLPEI
Trigger: AATTTCAGGAAGCATTGGAGTAGTGGCTTCTATCAATGAACAGGAAGGTATAGCTACAGTCAGATTCCCACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp GATTCGCCCTCTTTTCTCATTAGAATTGTACGTTCCTaGAGTGGGTTGGCTACAAATACACCATTTTCAACC +
Preference number: 6 (lower is better)
Translates to: DSPSFLIRIVRS*SGLATNTPFST
Trigger: GGTTGAAAATGGTGTATTTGTAGCCAACCCACTTCAGGAACGTACAATTCTAATGAGAAAAGAGGGCGAATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp AACGTCTTTGTTTTAGCCAGTGGGTGTGAGGGTTTCTaGATAAGAGAATTCACTTCTTGTAGGAACTTCTCC +
Preference number: 6 (lower is better)
Translates to: NVFVLASGCEGF*IREFTSCRNFS
Trigger: GGAGAAGTTCCTACAAGAAGTGAATTCTCTTATTCAGAAACCCTCACACCCACTGGCTAAAACAAAGACGTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS TCA 72 bp GTTGTGACAGGTGTTGTCCTTACAGCTCGGCTGTTTTaGTGTGTGTGTATGAAGACACTTAACATACCATTA +
Preference number: 6 (lower is better)
Translates to: VVTGVVLTARLF*CVCMKTLNIPL
Trigger: TAATGGTATGTTAAGTGTCTTCATACACACACATCAAAACAGCCGAGCTGTAAGGACAACACCTGTCACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS GCA 72 bp CTTCTCCATAATGTCACAAATACTGCTAAGATGATGTaGTTCAATTGGATGCTGCTTGCCCAAGACACTTGT +
Preference number: 6 (lower is better)
Translates to: LLHNVTNTAKMM*FNWMLLAQDTC
Trigger: ACAAGTGTCTTGGGCAAGCAGCATCCAATTGAAGCACATCATCTTAGCAGTATTTGTGACATTATGGAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp AGAAGATTGAGTTGGTGTATGCACATCGCACCAACGTaGTGCAATAATTGGTTTATAACCTCATTCGTGGTT +
Preference number: 6 (lower is better)
Translates to: RRLSWCMHIAPT*CNNWFITSFVV
Trigger: AACCACGAATGAGGTTATAAACCAATTATTGCACCACGTTGGTGCGATGTGCATACACCAACTCAATCTTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp AATGTCACAAATACTGCTAAGATGATGTGCTTCAATTaGATGCTGCTTGCCCAAGACACTTGTGATTGGAAG +
Preference number: 6 (lower is better)
Translates to: NVTNTAKMMCFN*MLLAQDTCDWK
Trigger: CTTCCAATCACAAGTGTCTTGGGCAAGCAGCATCCAATTGAAGCACATCATCTTAGCAGTATTTGTGACATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp ATTTTCCAGAATGCTTTCTGCGTATTTCCCCAATTGTaGAATGTACATCAGTGCTCTAGACAGAACCTTCTC +
Preference number: 6 (lower is better)
Translates to: IFQNAFCVFPQL*NVHQCSRQNLL
Trigger: GAGAAGGTTCTGTCTAGAGCACTGATGTACATTCCACAATTGGGGAAATACGCAGAAAGCATTCTGGAAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000547519.1
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp AGGCCCCGCATATATCACCAATTTGTCATAGTCATATaGCGAAGAGCATCTGCTATCAAATCTAAGGTACAG +
Preference number: 6 (lower is better)
Translates to: RPRIYHQFVIVI*RRASAIKSKVQ
Trigger: CTGTACCTTAGATTTGATAGCAGATGCTCTTCGCAATATGACTATGACAAATTGGTGATATATGCGGGGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS GCA 72 bp AGATTGAGTTGGTGTATGCACATCGCACCAACGTGGTaGAATAATTGGTTTATAACCTCATTCGTGGTTATA +
Preference number: 6 (lower is better)
Translates to: RLSWCMHIAPTW*NNWFITSFVVI
Trigger: TATAACCACGAATGAGGTTATAAACCAATTATTGCACCACGTTGGTGCGATGTGCATACACCAACTCAATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000311694.7
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CCA 72 bp TTTAATGTCTTCAATGGTGGGAAGATAAAGGTCTCTTaGGATGCCACCATTCTCTTCGTAGAGAAATTCAAC +
Preference number: 6 (lower is better)
Translates to: FNVFNGGKIKVS*DATILFVEKFN
Trigger: GTTGAATTTCTCTACGAAGAGAATGGTGGCATCCCAAGAGACCTTTATCTTCCCACCATTGAAGACATTAAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp AGTTTGTGTTCAGTTGGGGCAGTGGAGATGTACCATTaGCAAGAAATAAAGGTAGCAAGACCAGAGTTTATT +
Preference number: 6 (lower is better)
Translates to: SLCSVGAVEMYH*QEIKVARPEFI
Trigger: AATAAACTCTGGTCTTGCTACCTTTATTTCTTGCAAATGGTACATCTCCACTGCCCCAACTGAACACAAACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS GCA 72 bp TTTATTAGAGACTGCAGTGCATCAACCAAGTTCAAGTaGTTAATAACACAAGATACCACCATTTCCTCCATC +
Preference number: 6 (lower is better)
Translates to: FIRDCSASTKFK*LITQDTTISSI
Trigger: GATGGAGGAAATGGTGGTATCTTGTGTTATTAAGCACTTGAACTTGGTTGATGCACTGCAGTCTCTAATAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 90 bp CAAAGAGACTCTGATTTACTACAGACACGGTTAGAATCTCTTCTGTaGACATTTCCATCAATTCATCTTCACCATCCAAACTTGACAAAC +
Preference number: 6 (lower is better)
Translates to: QRDSDLLQTRLESLL*TFPSIHLHHPNLTN
Trigger: GTTTGTCAAGTTTGGATGGTGAAGATGAATTGATGGAAATGTCAACAGAAGAGATTCTAACCGTGTCTGTAGTAAATCAGAGTCTCTTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 90 bp CTAGAAAGAAGTTTGTGTTCAGTTGGGGCAGTGGAGATGTACCATTaGCAAGAAATAAAGGTAGCAAGACCAGAGTTTATTAATACTACT +
Preference number: 6 (lower is better)
Translates to: LERSLCSVGAVEMYH*QEIKVARPEFINTT
Trigger: AGTAGTATTAATAAACTCTGGTCTTGCTACCTTTATTTCTTGCAAATGGTACATCTCCACTGCCCCAACTGAACACAAACTTCTTTCTAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547519.1
CDS CCA 72 bp CTTTTCTCATTAGAATTGTACGTTCCTGAAGTGGGTTaGCTACAAATACACCATTTTCAACCACAAGTTCAA +
Preference number: 6 (lower is better)
Translates to: LFSLELYVPEVG*LQIHHFQPQVQ
Trigger: TTGAACTTGTGGTTGAAAATGGTGTATTTGTAGCCAACCCACTTCAGGAACGTACAATTCTAATGAGAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000682272.1
CDS CAA 72 bp ACTGTGAGACCTTTTCGAACTTTATCAATTGTGAACTaGTTTGCTTCGTCTTTAATGTCTTCAATGGTGGGA +
Preference number: 6 (lower is better)
Translates to: TVRPFRTLSIVN*FASSLMSSMVG
Trigger: TCCCACCATTGAAGACATTAAAGACGAAGCAAACAAGTTCACAATTGATAAAGTTCGAAAAGGTCTCACAGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 72 bp TCTGATTTACTACAGACACGGTTAGAATCTCTTCTGTaGACATTTCCATCAATTCATCTTCACCATCCAAAC +
Preference number: 6 (lower is better)
Translates to: SDLLQTRLESLL*TFPSIHLHHPN
Trigger: GTTTGGATGGTGAAGATGAATTGATGGAAATGTCAACAGAAGAGATTCTAACCGTGTCTGTAGTAAATCAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000651701.1
ENST00000682272.1
CDS CAA 90 bp AAAAGTAAAACACTACACAGCAACATACTTTATACTTGGTCTAAATaGAGGTCTAGCACGCCCAGAAATTTCCCTGAGCTTTATCATGAT +
Preference number: 6 (lower is better)
Translates to: KSKTLHSNILYTWSK*RSSTPRNFPELYHD
Trigger: ATCATGATAAAGCTCAGGGAAATTTCTGGGCGTGCTAGACCTCAATTTAGACCAAGTATAAAGTATGTTGCTGTGTAGTGTTTTACTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311694.7
CDS GCA 72 bp GAGACCTTTTCGAACTTTATCAATTGTGAACTTGTTTaGTTCGTCTTTAATGTCTTCAATGGTGGGAAGATA +
Preference number: 6 (lower is better)
Translates to: ETFSNFINCELV*FVFNVFNGGKI
Trigger: TATCTTCCCACCATTGAAGACATTAAAGACGAAGCAAACAAGTTCACAATTGATAAAGTTCGAAAAGGTCTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000377560.9
ENST00000550722.5
ENST00000550968.5
ENST00000651701.1
ENST00000682272.1
CDS CCA 72 bp AAAAGTAAAACACTACACAGCAACATACTTTATACTTaGTCTAAATTGAGGTCTAGCACGCCCAGAAATTTC +
Preference number: 6 (lower is better)
Translates to: KSKTLHSNILYT*SKLRSSTPRNF
Trigger: GAAATTTCTGGGCGTGCTAGACCTCAATTTAGACCAAGTATAAAGTATGTTGCTGTGTAGTGTTTTACTTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000311694.7